Your job contains 1 sequence.
>007684
MLRGNFLTPSLIRTSPFLTFLSKISLPLMHQSNCHTYRSLLCWHMHSFTKPITDIKQNRF
SADLTTGLCTLAFSKKSTVNESSAPNTGTMSNKSKKKARRESPEGVLRHKLDMCSKRGDV
FEALRLYDDARSNGITLSQHHYNVLLYVCSCKCGSESSENGDRENDSNLGLKRGFEIFQQ
MITDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGPALFGFCKLGN
TDKAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEILHRLRTLVRQVSESTFKI
IEDWFDSVDAAEIGVLNWDVSKVREGIVRGGGGWHGQGWLGSGKWRVERTQIDENGVCCS
CNERLVCIDIDPRETENFASSLSNLACQREVRSDFNKFQEWLGRHGPFDAVIDGANVGLV
NQHNFSFYQLNTVVNRLRQMSPSKRMPLVILHKGRVSGGPAQIPKNKKLLDIWRDGGALY
TTPPGSNDDWYWLYATVNCKSLLVTNDEMRDHLFQLLGTSFFPRWKEKHQIRLSVSRDGL
NLLMPPPYSIVIQESENGSWHVPVITGDDLEAPRQWLCATRARVKSLHSLFSN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007684
(593 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2045432 - symbol:PRORP1 "proteinaceous RNase P... 1828 1.4e-188 1
TAIR|locus:2141662 - symbol:PRORP3 "AT4G21900" species:37... 1087 4.8e-110 1
TAIR|locus:2059824 - symbol:PRORP2 "proteinaceous RNase P... 1059 4.4e-107 1
TAIR|locus:2175178 - symbol:AT5G60430 species:3702 "Arabi... 197 9.0e-15 1
RGD|1305089 - symbol:RGD1305089 "similar to 1110008L16Rik... 190 1.5e-14 2
MGI|MGI:1913382 - symbol:1110008L16Rik "RIKEN cDNA 111000... 187 8.1e-14 2
UNIPROTKB|O15091 - symbol:KIAA0391 "Mitochondrial ribonuc... 177 1.3e-12 2
TAIR|locus:2017754 - symbol:AT1G22960 species:3702 "Arabi... 130 8.6e-06 2
TAIR|locus:2026654 - symbol:AT1G63630 species:3702 "Arabi... 131 9.1e-06 1
TAIR|locus:1005716169 - symbol:AT5G21222 species:3702 "Ar... 138 1.3e-05 1
TAIR|locus:2012883 - symbol:AT1G20300 species:3702 "Arabi... 135 1.5e-05 1
TAIR|locus:2024367 - symbol:AT1G09680 "AT1G09680" species... 135 1.8e-05 1
TAIR|locus:2116372 - symbol:AT4G26680 "AT4G26680" species... 133 2.4e-05 1
TAIR|locus:2084978 - symbol:AT3G04760 species:3702 "Arabi... 133 3.0e-05 1
TAIR|locus:2034760 - symbol:AT1G12300 species:3702 "Arabi... 131 5.3e-05 1
TAIR|locus:2827891 - symbol:AT2G17670 species:3702 "Arabi... 129 5.5e-05 1
TAIR|locus:2177028 - symbol:AT5G12100 species:3702 "Arabi... 132 5.7e-05 1
TAIR|locus:2024301 - symbol:AT1G09820 "AT1G09820" species... 129 8.2e-05 1
TAIR|locus:2053552 - symbol:AT2G15630 "AT2G15630" species... 129 8.6e-05 1
TAIR|locus:2086032 - symbol:PPR40 "pentatricopeptide (PPR... 133 0.00011 2
TAIR|locus:2175443 - symbol:AT5G04810 species:3702 "Arabi... 127 0.00012 2
TAIR|locus:2025747 - symbol:AT1G80880 species:3702 "Arabi... 93 0.00014 2
TAIR|locus:2038426 - symbol:AT1G63320 species:3702 "Arabi... 116 0.00015 1
TAIR|locus:2139732 - symbol:AT4G11690 species:3702 "Arabi... 126 0.00016 1
TAIR|locus:2025580 - symbol:AT1G08610 species:3702 "Arabi... 119 0.00017 2
TAIR|locus:2039415 - symbol:AT2G16880 "AT2G16880" species... 125 0.00029 1
TAIR|locus:2065428 - symbol:AT2G01740 "AT2G01740" species... 123 0.00033 1
TAIR|locus:2061310 - symbol:GUN1 "AT2G31400" species:3702... 125 0.00038 1
TAIR|locus:2026192 - symbol:RPF2 "rna processing factor 2... 122 0.00050 1
TAIR|locus:2024296 - symbol:AT1G09900 "AT1G09900" species... 120 0.00076 1
TAIR|locus:2015494 - symbol:RPF3 "RNA processing factor 3... 120 0.00082 1
>TAIR|locus:2045432 [details] [associations]
symbol:PRORP1 "proteinaceous RNase P 1" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006855 "drug transmembrane transport"
evidence=IEA] [GO:0015238 "drug transmembrane transporter activity"
evidence=IEA] [GO:0015297 "antiporter activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0055085 "transmembrane
transport" evidence=IEA] [GO:0004526 "ribonuclease P activity"
evidence=IMP;IDA] [GO:0008033 "tRNA processing" evidence=IDA]
[GO:0009507 "chloroplast" evidence=IDA] InterPro:IPR002885
GO:GO:0005739 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0008033 PROSITE:PS51375 EMBL:AC006223 Pfam:PF01535
Pfam:PF13812 eggNOG:NOG68490 GO:GO:0004526 EMBL:AY091059
EMBL:BT015418 IPI:IPI00540508 PIR:E84730 RefSeq:NP_850186.1
UniGene:At.38106 PDB:4G23 PDB:4G24 PDB:4G25 PDB:4G26 PDBsum:4G23
PDBsum:4G24 PDBsum:4G25 PDBsum:4G26 ProteinModelPortal:Q66GI4
PaxDb:Q66GI4 PRIDE:Q66GI4 EnsemblPlants:AT2G32230.1 GeneID:817782
KEGG:ath:AT2G32230 GeneFarm:4941 TAIR:At2g32230
HOGENOM:HOG000006117 InParanoid:Q66GI4 OMA:KLDMCSK PhylomeDB:Q66GI4
ProtClustDB:CLSN2679969 Genevestigator:Q66GI4 Uniprot:Q66GI4
Length = 572
Score = 1828 (648.5 bits), Expect = 1.4e-188, P = 1.4e-188
Identities = 356/585 (60%), Positives = 434/585 (74%)
Query: 1 MLRGNFLTPSLIRTS-PFLTFLSKISLPLMHQSNCHTYRSLLCWHMHSFTKPITDIKQNR 59
MLR TPS R P + K+ +H +R +H K D +
Sbjct: 1 MLRLTCFTPSFSRACCPLFAMMLKVPSVHLHHPRFSPFRF---YHTSLLVKGTRD--RRL 55
Query: 60 FSADLTTGLCTLAFSKKSTVNESSAPNTGTMSNKSKKKARRESPEGVLRHKLDMCSKRGD 119
+ + LCTL + +S+A + +S K+KKKA ++SPE +L+ KLDMCSK+GD
Sbjct: 56 ILVERSRHLCTLPLA---AAKQSAASPSENLSRKAKKKAIQQSPEALLKQKLDMCSKKGD 112
Query: 120 VFEALRLYDDARSNGITLSQHHYNVLLYVCSCKCGSESSENGDRENDSNLGLKRGFEIFQ 179
V EALRLYD+AR NG+ LSQ+HYNVLLYVCS +E++ E+ N GL RGF+IF+
Sbjct: 113 VLEALRLYDEARRNGVQLSQYHYNVLLYVCSL---AEAAT----ESSPNPGLSRGFDIFK 165
Query: 180 QMITDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGPALFGFCKLG 239
QMI DKV PNEATFT+ ARLAVAK+DPEMAFD+VKQMK+FGI P+LRSYGPALFGFC+ G
Sbjct: 166 QMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKG 225
Query: 240 NTDKAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEILHRLRTLVRQVSESTFK 299
+ DKAYEVDAHM ES VVPEEPEL+ALLK+S+D K DKVY+ L RLR LVRQVS+STF
Sbjct: 226 DADKAYEVDAHMVESEVVPEEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVSKSTFD 285
Query: 300 IIEDWFDSVDAAEIGVLNWDVSKVREXXXXXXXXXXXXXXXXXXKWRVERTQIDENGVCC 359
+IE+WF S A + GV WDV K+R+ KW V+RT++DENGVC
Sbjct: 286 MIEEWFKSEVATKTGVKKWDVKKIRDAVVSGGGGWHGQGWLGTGKWNVKRTEMDENGVCK 345
Query: 360 SCNERLVCIDIDPRETENFASSLSNLACQREVRSDFNKFQEWLGRHGPFDAVIDGANVGL 419
C E+LVCIDI+P ETE FA+SL+ LAC+REV+++FN+FQEWL RHGPFDAVIDGAN+GL
Sbjct: 346 CCKEKLVCIDINPVETETFAASLTRLACEREVKANFNQFQEWLERHGPFDAVIDGANMGL 405
Query: 420 VNQHNFSFYQLNTVVNRLRQMSPSKRMPLVILHKGRVSGGPAQIPKNKKLLDIWRDGGAL 479
VNQ +FSF+QLN V R +Q+SPSKR+PLVILHK RV+GGPA PKN+ LL+ W++ GAL
Sbjct: 406 VNQRSFSFFQLNNTVQRCQQISPSKRLPLVILHKSRVNGGPATYPKNRALLEKWKNAGAL 465
Query: 480 YTTPPGSNDDWYWLYATVNCKSLLVTNDEMRDHLFQLLGTSFFPRWKEKHQIRLSVSR-D 538
Y TPPGSNDDWYWLYA V+CK LLVTNDEMRDHLFQLLG SFFPRWKEKHQ+R+SV+R D
Sbjct: 466 YATPPGSNDDWYWLYAAVSCKCLLVTNDEMRDHLFQLLGNSFFPRWKEKHQVRISVTRED 525
Query: 539 GLNLLMPPPYSIVIQESENGSWHVPVITGDDLEAPRQWLCATRAR 583
GL L MPPPYSIVIQESE+G+WHVP+ DDL+ RQWLCA R++
Sbjct: 526 GLKLNMPPPYSIVIQESEDGTWHVPMSVEDDLQTSRQWLCAKRSK 570
>TAIR|locus:2141662 [details] [associations]
symbol:PRORP3 "AT4G21900" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0016020 "membrane"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0001682
"tRNA 5'-leader removal" evidence=IDA] [GO:0004526 "ribonuclease P
activity" evidence=IDA] [GO:0006397 "mRNA processing" evidence=IMP]
[GO:0043144 "snoRNA processing" evidence=IMP] GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006397 EMBL:AL161556
PROSITE:PS51375 EMBL:AL021890 GO:GO:0043144 InterPro:IPR021869
Pfam:PF11977 eggNOG:NOG68490 GO:GO:0004526 GO:GO:0001682
HOGENOM:HOG000006117 EMBL:AK226669 EMBL:AK230440 IPI:IPI00543150
IPI:IPI00892032 PIR:T05472 RefSeq:NP_193921.2 UniGene:At.74070
ProteinModelPortal:F4JKB6 PRIDE:F4JKB6 EnsemblPlants:AT4G21900.1
GeneID:828279 KEGG:ath:AT4G21900 TAIR:At4g21900 OMA:SCEPMAD
Uniprot:F4JKB6
Length = 576
Score = 1087 (387.7 bits), Expect = 4.8e-110, P = 4.8e-110
Identities = 229/524 (43%), Positives = 312/524 (59%)
Query: 74 SKKSTVNESSAPNTGTMSNKSKKKARRESPEGVLRHKLDMCSKRGDVFEALRLYDDA-RS 132
S T N S + + N +KKK +PE L L CSKR D+ AL LYD A S
Sbjct: 59 SMAGTDNRRSRHDDESPKNPNKKKKGNRNPEKSLLINLHSCSKRKDLSAALALYDAAITS 118
Query: 133 NGITLSQHHYNVLLYVCSCKCGSESSENGDRENDSNLGLKRGFEIFQQMITDKVDPNEAT 192
+ I L+Q H+ LLY+CS S + + + RGF+IF +M++ + PNE++
Sbjct: 119 SDIRLNQQHFQSLLYLCSAFISDPSLQT--------VAIDRGFQIFDRMVSSGISPNESS 170
Query: 193 FTSVARLAVAKEDPEMAFDLVKQMKSFG--IPPKLRSYGPALFGFCKLGNTDKAYEVDAH 250
T+VARLA AK D + AF LVK + + G P+LR+Y PAL FC +K YEV+ H
Sbjct: 171 VTAVARLAAAKGDGDYAFKLVKDLVAVGGVSVPRLRTYAPALLCFCDTLEAEKGYEVEDH 230
Query: 251 MGESGVVPEEPELSALLKLSVDAKKVDKVYEILHRLRTLVRQVSESTFKIIEDWFDSVDA 310
M SG+V EE E+SALLK+S + +KVY L +LR V VSE T K IE+WF V A
Sbjct: 231 MDASGIVLEEAEISALLKVSAATGRENKVYRYLQKLRECVGCVSEETSKAIEEWFYGVKA 290
Query: 311 AEIGV--LNWDVSKVREXXXXXXXXXXXXXXXXXXKWRVERTQIDENGVCCSCNERLVCI 368
+E+ + D+ +R KW V++ + G C SC+E L C+
Sbjct: 291 SEVSDNGIGSDIELLRAAVLKNGGGWHGLGWVGEGKWIVKKGNVSSAGKCLSCDEHLACV 350
Query: 369 DIDPRETENFASSLSNLACQREVR-------SDFNKFQEWLGRHGPFDAVIDGANVGLVN 421
D + ETE+F +SL LA +R+ + +DF++FQEWL +HG ++A++DGAN+GL
Sbjct: 351 DTNEVETEDFVNSLVTLAMERKAKMNSCEPMADFSEFQEWLEKHGDYEAILDGANIGLYQ 410
Query: 422 QH----NFSFYQLNTVVNRLRQMSPSKRMPLVILHKGRVSGGPAQIPKNKKLLDIWRDGG 477
Q+ FS QL VV L S SK+ PL++LHK RV+ + P ++ L++ W +
Sbjct: 411 QNFADGGFSLPQLEAVVKELYNKSGSKKQPLILLHKKRVNA-LLENPNHRNLVEEWINNN 469
Query: 478 ALYTTPPGSNDDWYWLYATVNCKSLLVTNDEMRDHLFQLLGTSFFPRWKEKHQIRLSVSR 537
LY TPPGSNDDWYWLYA K LLVTNDEMRDH+F+LL SFF +WKE+HQ+R + +
Sbjct: 470 VLYATPPGSNDDWYWLYAAAKLKCLLVTNDEMRDHIFELLSNSFFQKWKERHQVRFTFVK 529
Query: 538 DGLNLLMPPPYSIVIQESENGSWHVPVITGDDLEAPRQWLCATR 581
L L MPPP+S+VIQESE GSWHVP+ + D E+ R W+C TR
Sbjct: 530 GCLKLEMPPPFSVVIQESEKGSWHVPITSQDKEESLRSWMCITR 573
>TAIR|locus:2059824 [details] [associations]
symbol:PRORP2 "proteinaceous RNase P 2" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0016020 "membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0001682 "tRNA 5'-leader removal" evidence=IDA]
[GO:0004526 "ribonuclease P activity" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IMP] [GO:0043144 "snoRNA processing"
evidence=IMP] GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006397 EMBL:AC005825 PROSITE:PS51375 GO:GO:0043144
InterPro:IPR021869 Pfam:PF11977 eggNOG:NOG68490 GO:GO:0004526
GO:GO:0001682 HOGENOM:HOG000006117 EMBL:AK175948 IPI:IPI00545620
IPI:IPI00657270 PIR:E84542 RefSeq:NP_179256.3 UniGene:At.29161
ProteinModelPortal:Q680B9 PaxDb:Q680B9 PRIDE:Q680B9
EnsemblPlants:AT2G16650.1 GeneID:816166 KEGG:ath:AT2G16650
TAIR:At2g16650 InParanoid:Q680B9 OMA:EIQESEM PhylomeDB:Q680B9
ProtClustDB:CLSN2681692 Genevestigator:Q680B9 Uniprot:Q680B9
Length = 528
Score = 1059 (377.8 bits), Expect = 4.4e-107, P = 4.4e-107
Identities = 222/509 (43%), Positives = 308/509 (60%)
Query: 92 NKSKKKARRESPEGVLRHKLDMCSKRGDVFEALRLYDDA-RSNGITLSQHHYNVLLYVCS 150
NK KK +R +PE L L+ CSK D+ AL LYD A S+ + LSQ H+ LLY+CS
Sbjct: 20 NKKKKVSR--NPETNLLFNLNSCSKSKDLSAALALYDAAITSSEVRLSQQHFQTLLYLCS 77
Query: 151 CKCGSESSENGDRENDSNLGLKRGFEIFQQMITDKVDPNEATFTSVARLAVAKEDPEMAF 210
S + L + RGFEIF +M++ + PNEA+ TSVARLA AK + + AF
Sbjct: 78 ASITDISLQY--------LAIDRGFEIFDRMVSSGISPNEASVTSVARLAAAKGNGDYAF 129
Query: 211 DLVKQMKSFG--IPPKLRSYGPALFGFCKLGNTDKAYEVDAHMGESGVVPEEPELSALLK 268
+VK+ S G P+LR+Y PAL FC+ +K YEV+ HM +G+ EE E+SALLK
Sbjct: 130 KVVKEFVSVGGVSIPRLRTYAPALLCFCEKLEAEKGYEVEEHMEAAGIALEEAEISALLK 189
Query: 269 LSVDAKKVDKVYEILHRLRTLVRQVSESTFKIIEDWFDSVDAAEIGV--LNWDVSKVREX 326
+S + +KVY LH+LR V VSE T KIIE+WF A E+G + DV +RE
Sbjct: 190 VSAATGRENKVYRYLHKLREYVGCVSEETLKIIEEWFCGEKAGEVGDNGIGSDVGMLREA 249
Query: 327 XXXXXXXXXXXXXXXXXKWRVERTQIDENGVCCSCNERLVCIDIDPRETENFASSLSNLA 386
KW V++ + G C SC+E+L C+D + ET+ F SL LA
Sbjct: 250 VLNNGGGWHGHGWVGEGKWTVKKGNVSSTGRCLSCSEQLACVDTNEVETQKFVDSLVALA 309
Query: 387 CQREVRSD-------FNKFQEWLGRHGPFDAVIDGANVGLVNQH----NFSFYQLNTVVN 435
R+ + + F++FQ+WL +HG ++A++DGAN+GL Q+ +FS QL +V+
Sbjct: 310 MDRKTKMNSCETNVVFSEFQDWLEKHGDYEAIVDGANIGLYQQNFVDGSFSLSQLESVMK 369
Query: 436 RLRQMSPSKRMPLVILHKGRVSGGPAQIPKNKKLLDIWRDGGALYTTPPGSNDDWYWLYA 495
L + S + + PL++LHK RV + P ++ L++ W G LY TPPGSNDDWYWLYA
Sbjct: 370 ELYRESGNNKWPLILLHKRRVKT-LLENPTHRNLVEEWISNGVLYATPPGSNDDWYWLYA 428
Query: 496 TVNCKSLLVTNDEMRDHLFQLLGTSFFPRWKEKHQIRLSVSRDGLNLLMPPPYSIVIQES 555
K LLVTNDEMRDH+F+LLG++FF +WKE+HQ+R + + L L MP P+S+VIQES
Sbjct: 429 AAKLKCLLVTNDEMRDHIFELLGSTFFQKWKERHQVRYTFVKGNLKLEMPSPFSVVIQES 488
Query: 556 ENGSWHVPVITGDDLEAPRQWLCATRARV 584
E GSWH PV ++ E+ R W+C +R +
Sbjct: 489 EKGSWHFPVSCENNEESSRTWMCISRQSI 517
>TAIR|locus:2175178 [details] [associations]
symbol:AT5G60430 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0006855 "drug
transmembrane transport" evidence=IEA] [GO:0015238 "drug
transmembrane transporter activity" evidence=IEA] [GO:0015297
"antiporter activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
EMBL:CP002688 EMBL:AB011483 eggNOG:NOG68490 IPI:IPI00517211
RefSeq:NP_001032110.1 RefSeq:NP_200851.1 UniGene:At.49199
ProteinModelPortal:Q9FKK3 PaxDb:Q9FKK3 EnsemblPlants:AT5G60430.1
EnsemblPlants:AT5G60430.2 GeneID:836164 KEGG:ath:AT5G60430
TAIR:At5g60430 InParanoid:Q9FKK3 PhylomeDB:Q9FKK3
ProtClustDB:CLSN2686686 ArrayExpress:Q9FKK3 Genevestigator:Q9FKK3
Uniprot:Q9FKK3
Length = 156
Score = 197 (74.4 bits), Expect = 9.0e-15, P = 9.0e-15
Identities = 38/89 (42%), Positives = 58/89 (65%)
Query: 344 KWRVERTQIDENGVCCSCNERLVCIDIDPRETENFASSLSNLACQREVR-----SD--FN 396
KW V++ + G C SC+E+L C+D + ET+ F SL LA +R+ + SD F+
Sbjct: 23 KWIVKKGNVSSTGRCLSCSEQLACVDTNEVETQKFVDSLVALAMERKAKMNSCESDVVFS 82
Query: 397 KFQEWLGRHGPFDAVIDGANVGLVNQHNF 425
+FQ+WL +HG ++A++DGAN+GL Q NF
Sbjct: 83 EFQDWLEKHGDYEAIVDGANIGLYQQ-NF 110
>RGD|1305089 [details] [associations]
symbol:RGD1305089 "similar to 1110008L16Rik protein"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
RGD:1305089 GO:GO:0005739 GO:GO:0008033 EMBL:CH473947
eggNOG:NOG68490 HOVERGEN:HBG099441 OMA:LRDHKAC OrthoDB:EOG4DBTFD
InterPro:IPR026318 PANTHER:PTHR13547 GeneTree:ENSGT00390000002201
HOGENOM:HOG000294131 EMBL:BC168878 IPI:IPI00367164
RefSeq:NP_001100200.1 UniGene:Rn.35652 PRIDE:B5DF07
Ensembl:ENSRNOT00000009304 GeneID:299050 KEGG:rno:299050
UCSC:RGD:1305089 CTD:299050 NextBio:644711 Genevestigator:B5DF07
Uniprot:B5DF07
Length = 587
Score = 190 (71.9 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 62/255 (24%), Positives = 113/255 (44%)
Query: 344 KWRVERTQIDENGVCCSCNERLVCIDIDPRETENFASSLSNLAC------QREVRSDFNK 397
+W+ + T I ++G C SC + I + P E E ++ ++ + +
Sbjct: 334 QWKGQFTTIQKSGQCSSCGRAIESIHLSPEEYEFLKETIMRDVIDGGDQYKKTTPQELKR 393
Query: 398 FQEWLGRHGPFDAVIDGANVGLVNQHNFSFYQLNTVVNRLRQMSPSKRMPLVILHKGRVS 457
F+ ++ PFD VIDG NV + L +V++L Q + + L++L + +
Sbjct: 394 FERFVKSCPPFDIVIDGLNVAKMFPKGRESQNLLGIVSQLAQQN----LQLLVLGRKHML 449
Query: 458 GGPAQIPKNKKLLDIWRDGGALYTTPPGSNDDWYWLYATVNCKS--LLVTNDEMRDH--- 512
+Q K++ ++ R + S DD + LYAT+N S +T D +RDH
Sbjct: 450 RPSSQWRKDE--MEQVRKQAHCFFADNISEDDPFLLYATLNSGSHCKFITKDLLRDHKAC 507
Query: 513 LFQLLGTSFFPRWKEKHQIRLSVS--RDGLNLLMPPPYSIVIQESENGSWHVP----VIT 566
L F +W++ HQ+ ++ + L Y V+Q + + +WH+P ++
Sbjct: 508 LPDARAQRLFFKWQQGHQLAITKGFLKSKLTFQHILSYDTVVQTTGD-TWHIPYDEDLVP 566
Query: 567 GDDLEAPRQWLCATR 581
E P +WLC R
Sbjct: 567 RSSCEVPTKWLCLQR 581
Score = 75 (31.5 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 53/239 (22%), Positives = 98/239 (41%)
Query: 76 KSTVNESSAPNTGTMSNKSKK--KARRESPEGVLRHKLDMCSKRGDVFEALRLYDDARSN 133
KSTV + P +K K+ K + + V+ CS DV ++L + A++N
Sbjct: 112 KSTVQLPTKPLNSEEWDKLKEDFKGKASFEDFVISQMTRSCSSV-DVAKSLLAWVAAKNN 170
Query: 134 GITLSQHHYNVLL-YVCSCKCGSESSENGDRENDSNLGLKRGFEIFQQMITDKVDPNEAT 192
GI YN+L+ Y+ C ++SE D +++ M
Sbjct: 171 GIV----GYNLLVKYLYLCVFHKQTSEVID--------------VYEIMKAKYKSLESGG 212
Query: 193 FTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGPALFGFCKLGNTDKAYEVDAHMG 252
+T + R + + A L++ +K +P K ++YG + G + + A+ + +
Sbjct: 213 YTLLIRGLIHSDRWREALLLLEDIKKVMVPSK-KNYGDCIQGALLHQDVNVAWSLYQELV 271
Query: 253 ESGVVPEEPELSALL---KLSVDAKKVDKVYEILHRLRTLVRQVSESTFKIIEDWFDSV 308
++P L A K D + +++ +IL LR ES I+ WF+S+
Sbjct: 272 GHNLIPLLETLKAFFDHGKDMNDDQYSNQLLDILLYLRNNQLYPGESFAHSIKTWFESI 330
>MGI|MGI:1913382 [details] [associations]
symbol:1110008L16Rik "RIKEN cDNA 1110008L16 gene"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] MGI:MGI:1913382 GO:GO:0005739 GO:GO:0008033
EMBL:CH466526 eggNOG:NOG68490 HOVERGEN:HBG099441 OMA:LRDHKAC
OrthoDB:EOG4DBTFD InterPro:IPR026318 PANTHER:PTHR13547
EMBL:AK003589 EMBL:AK008749 EMBL:AK031144 EMBL:AK151976
EMBL:AK152028 EMBL:BC034876 EMBL:AK172942 IPI:IPI00172345
RefSeq:NP_079649.1 UniGene:Mm.383213 ProteinModelPortal:Q8JZY4
STRING:Q8JZY4 PhosphoSite:Q8JZY4 PRIDE:Q8JZY4
Ensembl:ENSMUST00000021411 GeneID:66132 KEGG:mmu:66132
UCSC:uc007noo.2 GeneTree:ENSGT00390000002201 HOGENOM:HOG000294131
InParanoid:Q6A076 NextBio:320728 Bgee:Q8JZY4 Genevestigator:Q8JZY4
Uniprot:Q8JZY4
Length = 584
Score = 187 (70.9 bits), Expect = 8.1e-14, Sum P(2) = 8.1e-14
Identities = 64/257 (24%), Positives = 110/257 (42%)
Query: 344 KWRVERTQIDENGVCCSCNERLVCIDIDPRETENFASSLSNLAC------QREVRSDFNK 397
+W+ + T I ++G C C + I + P E E + ++ + +
Sbjct: 331 QWKGQFTTIQKSGQCSGCGRTIEPIHLSPEEYEFLKEKIMRDVIDGGDQYKKTTPQELKR 390
Query: 398 FQEWLGRHGPFDAVIDGANVGLVNQHNFSFYQLNTVVNRLRQMSPSKRMPLVILHKGRVS 457
F+ ++ PFD VIDG NV + L VV++L Q + + L++L + +
Sbjct: 391 FESFVNSCPPFDIVIDGLNVAKMFPKGRESQNLLGVVSQLAQQN----LQLLVLGRKHML 446
Query: 458 GGPAQIPKNKKLLDIWRDGGALYTTPPGSNDDWYWLYATVN----CKSLLVTNDEMRDH- 512
+Q K + ++ R + S DD + LYAT+N CK +T D +RDH
Sbjct: 447 RPSSQWRKEE--MEQVRKQAHCFFADNISEDDPFLLYATLNSGNHCK--FITKDLLRDHK 502
Query: 513 --LFQLLGTSFFPRWKEKHQIRL--SVSRDGLNLLMPPPYSIVIQESENGSWHVP----V 564
L F +W++ HQ+ + + L Y V+Q + + SWH+P +
Sbjct: 503 ACLPDARTQRLFFKWQQGHQLAIMKGFQKSKLTFQHILSYDTVVQRTGD-SWHIPYDEDL 561
Query: 565 ITGDDLEAPRQWLCATR 581
+ E P +WLC R
Sbjct: 562 VQRSSCEVPTKWLCLQR 578
Score = 71 (30.1 bits), Expect = 8.1e-14, Sum P(2) = 8.1e-14
Identities = 50/243 (20%), Positives = 96/243 (39%)
Query: 72 AFSKKSTVNESSAPNTGTMSNKSKK--KARRESPEGVLRHKLDMCSKRGDVFEALRLYDD 129
A +S+V + P +K K+ K + + ++ C DV ++L +
Sbjct: 105 ALPVRSSVQLPTKPLNSAEWDKLKEDFKGKASFEDFIISQMARNCCSV-DVAKSLLAWVA 163
Query: 130 ARSNGITLSQHHYNVLL-YVCSCKCGSESSENGDRENDSNLGLKRGFEIFQQMITDKVDP 188
A++NGI YN+L+ Y+ C ++SE D +++ M
Sbjct: 164 AKNNGIV----GYNLLVKYLYLCVFHKQTSEVID--------------VYEIMKAKYKSL 205
Query: 189 NEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGPALFGFCKLGNTDKAYEVD 248
+T + R + + + L++ +K +P K ++YG + G + + A+ +
Sbjct: 206 ESGGYTLLIRGLIHSDRWRESLLLLEDIKKVMVPSK-KNYGDCIQGALLHQDVNTAWNLY 264
Query: 249 AHMGESGVVPEEPELSALLKLSVDAKK---VDKVYEILHRLRTLVRQVSESTFKIIEDWF 305
+ ++P L A D DK+ +IL LR ES I+ WF
Sbjct: 265 QELIGHNLIPPLETLKAFFDYGKDINDDHYSDKLLDILLYLRNNQLYPGESFAHSIKTWF 324
Query: 306 DSV 308
+S+
Sbjct: 325 ESI 327
>UNIPROTKB|O15091 [details] [associations]
symbol:KIAA0391 "Mitochondrial ribonuclease P protein 3"
species:9606 "Homo sapiens" [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0005739 EMBL:CH471078 GO:GO:0008033 EMBL:AB002389
EMBL:BX161394 EMBL:BX161487 EMBL:AK301931 EMBL:AK303508
EMBL:AK304066 EMBL:AL121594 EMBL:BC032221 EMBL:BC044580
IPI:IPI00004584 IPI:IPI00647491 IPI:IPI00915794 IPI:IPI00915950
RefSeq:NP_001243607.1 RefSeq:NP_001243608.1 RefSeq:NP_001243609.1
RefSeq:NP_001243610.1 RefSeq:NP_055487.2 UniGene:Hs.458487
UniGene:Hs.739309 ProteinModelPortal:O15091 IntAct:O15091
STRING:O15091 PhosphoSite:O15091 PaxDb:O15091 PRIDE:O15091
Ensembl:ENST00000557565 GeneID:9692 KEGG:hsa:9692 UCSC:uc001wsy.1
UCSC:uc001wsz.1 UCSC:uc001wtc.1 CTD:9692 GeneCards:GC14P035591
GeneCards:GC14P035592 H-InvDB:HIX0018405 H-InvDB:HIX0079614
HGNC:HGNC:19958 HPA:HPA020459 MIM:609947 neXtProt:NX_O15091
PharmGKB:PA134879499 eggNOG:NOG68490 HOVERGEN:HBG099441 OMA:LRDHKAC
OrthoDB:EOG4DBTFD PhylomeDB:O15091 ChiTaRS:KIAA0391 GenomeRNAi:9692
NextBio:36401 ArrayExpress:O15091 Bgee:O15091 CleanEx:HS_KIAA0391
Genevestigator:O15091 GermOnline:ENSG00000100890 InterPro:IPR026318
PANTHER:PTHR13547 Uniprot:O15091
Length = 583
Score = 177 (67.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 60/253 (23%), Positives = 114/253 (45%)
Query: 344 KWRVERTQIDENGVCCSCNERLVCIDIDPRETENFASSLSNLAC------QREVRSDFNK 397
+W+ + T + ++G C C + + I + P E E + ++ + +
Sbjct: 334 QWKGQFTTVRKSGQCSGCGKTIESIQLSPEEYECLKGKIMRDVIDGGDQYRKTTPQELKR 393
Query: 398 FQEWLGRHGPFDAVIDGANVGLVNQHNFSFYQLNTVVNRLRQMSPSKRMPLVILHKGRVS 457
F+ ++ PFD VIDG NV + L VV++L + + + L++L + +
Sbjct: 394 FENFIKSRPPFDVVIDGLNVAKMFPKVRESQLLLNVVSQLAK----RNLRLLVLGRKHML 449
Query: 458 GGPAQIPKNKKLLDIWRDGGALYTTPPGSNDDWYWLYATVNCKS--LLVTNDEMRDHLFQ 515
+Q +++ + ++ + + S DD + LYAT++ + +T D MRDH
Sbjct: 450 RRSSQWSRDE-MEEVQKQASCFFADDI-SEDDPFLLYATLHSGNHCRFITRDLMRDHKAC 507
Query: 516 LLGTS---FFPRWKEKHQIRLSVSR-DGLNLLMPP--PYSIVIQESENGSWHVP----VI 565
L F +W++ HQ+ + V+R G L Y V+Q + + SWH+P ++
Sbjct: 508 LPDAKTQRLFFKWQQGHQLAI-VNRFPGSKLTFQRILSYDTVVQTTGD-SWHIPYDEDLV 565
Query: 566 TGDDLEAPRQWLC 578
E P +WLC
Sbjct: 566 ERCSCEVPTKWLC 578
Score = 70 (29.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 49/218 (22%), Positives = 90/218 (41%)
Query: 95 KKKARRESPEGVLRHKLDMCSKRGDVFEALRLYDDARSNGITLSQHHYNVLL-YVCSCKC 153
K+ + S E + ++ C DV ++L + A++NGI Y++L+ Y+ C
Sbjct: 132 KENTGKTSFESWIISQMAGCHSSIDVAKSLLAWVAAKNNGIV----SYDLLVKYLYLCVF 187
Query: 154 GSESSENGDRENDSNLGLKRGFEIFQQMITDKVDPNEATFTSVARLAVAKEDPEMAFDLV 213
++SE D FEI + ++P ++ + R + + A L+
Sbjct: 188 HMQTSEVIDV-----------FEIMKARYKT-LEPRG--YSLLIRGLIHSDRWREALLLL 233
Query: 214 KQMKSFGIPPKLRSYGPALFGFCKLGNTDKAYEVDAHMGESGVVPEEPELSALLKLSVDA 273
+ +K I P ++Y + G + + A+ + + +VP L A D
Sbjct: 234 EDIKKV-ITPSKKNYNDCIQGALLHQDVNTAWNLYQELLGHDIVPMLETLKAFFDFGKDI 292
Query: 274 KK---VDKVYEILHRLRTLVRQVSESTFKIIEDWFDSV 308
K +K+ +IL LR ES I+ WF+SV
Sbjct: 293 KDDNYSNKLLDILSYLRNNQLYPGESFAHSIKTWFESV 330
>TAIR|locus:2017754 [details] [associations]
symbol:AT1G22960 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AF000657 Pfam:PF13041 IPI:IPI00538383
PIR:F86363 RefSeq:NP_173709.1 UniGene:At.65923
ProteinModelPortal:P0C7Q9 SMR:P0C7Q9 EnsemblPlants:AT1G22960.1
GeneID:838903 KEGG:ath:AT1G22960 GeneFarm:4850 TAIR:At1g22960
eggNOG:NOG269870 HOGENOM:HOG000243968 OMA:HESREVE PhylomeDB:P0C7Q9
ProtClustDB:CLSN2914414 Genevestigator:P0C7Q9 Uniprot:P0C7Q9
Length = 718
Score = 130 (50.8 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 31/112 (27%), Positives = 56/112 (50%)
Query: 172 KRGFEIFQQMITDKVDPNEATFTSVARLAVAKEDP-EMAFDLVKQMKSFGIPPKLRSYGP 230
K ++ +M+ ++ P+ T+ V AK E AF +MK G+ P + ++
Sbjct: 567 KMARNLYDEMLRKRLYPSVITYF-VLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNA 625
Query: 231 ALFGFCKLGNTDKAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEI 282
L+G CK GN D+AY M E G+ P + + L+ + D +K ++V ++
Sbjct: 626 LLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKL 677
Score = 56 (24.8 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 111 LDMCSKRGDVFEALRLYDDARSNGITLSQHHYNVLL 146
LD C K GD+ +++ + + I S+ YN+L+
Sbjct: 245 LDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILI 280
>TAIR|locus:2026654 [details] [associations]
symbol:AT1G63630 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 IPI:IPI00527951
RefSeq:NP_176550.1 UniGene:At.50801 ProteinModelPortal:F4I3N7
SMR:F4I3N7 EnsemblPlants:AT1G63630.1 GeneID:842667
KEGG:ath:AT1G63630 OMA:INGCANA ArrayExpress:F4I3N7 Uniprot:F4I3N7
Length = 257
Score = 131 (51.2 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 55/216 (25%), Positives = 95/216 (43%)
Query: 111 LDMCSKRGDVFEALRLYDDARSNGITLSQHHYNVLLYVCSCKCGSESSENGDRENDSNLG 170
+D K G+ A L+ + GI NVL Y C +S + R +D++
Sbjct: 17 VDRLCKDGNHINAQNLFTEMHEKGI-----FPNVLTYNCMI----DSFCHSGRWSDAD-- 65
Query: 171 LKRGFEIFQQMITDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGP 230
++ + MI +++P+ TF+++ V + A ++ K+M + I P +Y
Sbjct: 66 -----QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 231 ALFGFCKLGNTDKAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEI---LHRLR 287
+ GFCK D A + M G P+ S L+ AK+VD EI +HR
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 288 TLVRQVSESTFKIIEDWFD--SVDAAEIGVLNWDVS 321
+ V+ +T +I + +DAA+ +LN +S
Sbjct: 181 IVANTVTYTT--LIHGFCQVGDLDAAQ-DLLNEMIS 213
>TAIR|locus:1005716169 [details] [associations]
symbol:AT5G21222 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA;ISS] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR011990 Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 InterPro:IPR002885 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC140977
HSSP:P49137 TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:AB050965
EMBL:AB052663 IPI:IPI00538310 RefSeq:NP_850859.2 UniGene:At.22168
ProteinModelPortal:Q8S9D1 SMR:Q8S9D1 STRING:Q8S9D1 PaxDb:Q8S9D1
PRIDE:Q8S9D1 EnsemblPlants:AT5G21222.1 GeneID:832244
KEGG:ath:AT5G21222 TAIR:At5g21222 HOGENOM:HOG000115643
InParanoid:Q8S9D1 OMA:NSNDANT PhylomeDB:Q8S9D1
ProtClustDB:CLSN2915154 Genevestigator:Q8S9D1 Uniprot:Q8S9D1
Length = 831
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 40/144 (27%), Positives = 70/144 (48%)
Query: 167 SNLG-LKRGFEIFQQMITDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKL 225
S++G +KR EI+ M+ +DP+ F+ +A+ +PE A ++ QM+ FG+ P +
Sbjct: 612 SSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNV 671
Query: 226 RSYGPALFGFCKLGNTDKAYEVDAHM-GESGVVPEEPELSALLKLSVDAKKVDKVYEILH 284
Y + G+C G KA +V M G G+ P L+ +AK+ K E+L
Sbjct: 672 VIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLK 731
Query: 285 RLRTLVRQVSESTFKIIEDWFDSV 308
+ + T ++I D + S+
Sbjct: 732 DMEGKNVVPTRKTMQLIADGWKSI 755
>TAIR|locus:2012883 [details] [associations]
symbol:AT1G20300 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM;IDA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AC026234 Pfam:PF12854 Pfam:PF13041
EMBL:AF446865 EMBL:AY052274 IPI:IPI00526119 PIR:F86336
RefSeq:NP_564110.1 UniGene:At.26508 ProteinModelPortal:Q9LN22
PRIDE:Q9LN22 EnsemblPlants:AT1G20300.1 GeneID:838618
KEGG:ath:AT1G20300 GeneFarm:4848 TAIR:At1g20300 eggNOG:NOG269752
HOGENOM:HOG000243285 InParanoid:Q9LN22 OMA:FRRMEEY PhylomeDB:Q9LN22
ProtClustDB:CLSN2687879 Genevestigator:Q9LN22 Uniprot:Q9LN22
Length = 537
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 34/138 (24%), Positives = 68/138 (49%)
Query: 167 SNLGLKRGF---EIFQQMITDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPP 223
SNL KR + F + D+ +P+ +T++ R + A + K+MK GI P
Sbjct: 229 SNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEP 288
Query: 224 KLRSYGPALFGFCKLGNTDKAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEIL 283
+ +Y + C+ G +A++V A M +SG P + L+++ V A + +KV ++
Sbjct: 289 NVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVY 348
Query: 284 HRLRTLVRQVSESTFKII 301
++++ L + T+ +
Sbjct: 349 NQMKKLGCEPDTITYNFL 366
>TAIR|locus:2024367 [details] [associations]
symbol:AT1G09680 "AT1G09680" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC000132 Pfam:PF13041
IPI:IPI00543182 PIR:F86230 RefSeq:NP_172439.1 UniGene:At.65894
ProteinModelPortal:O04491 PaxDb:O04491 PRIDE:O04491
EnsemblPlants:AT1G09680.1 GeneID:837496 KEGG:ath:AT1G09680
GeneFarm:4814 TAIR:At1g09680 eggNOG:NOG330918 HOGENOM:HOG000240851
InParanoid:O04491 OMA:PDDITYN PhylomeDB:O04491
ProtClustDB:CLSN2679497 Genevestigator:O04491 Uniprot:O04491
Length = 607
Score = 135 (52.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 49/160 (30%), Positives = 76/160 (47%)
Query: 111 LDMCSKRGDVFEALRLYDDARSNGITLSQHHYNVLLYVCS-CKCGSESSENGDRENDSNL 169
+D + GDV AL + + NGI L + ++ L VC CK G R D+
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSAL--VCGMCKEG--------RVIDAER 471
Query: 170 GLKRGFEIFQQMITDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYG 229
L+ +M+ + P++ T+T + K D + F L+K+M+S G P + +Y
Sbjct: 472 ALR-------EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYN 524
Query: 230 PALFGFCKLGNTDKA-YEVDAHMGESGVVPEEPELSALLK 268
L G CKLG A +DA M GVVP++ + LL+
Sbjct: 525 VLLNGLCKLGQMKNADMLLDA-MLNIGVVPDDITYNTLLE 563
>TAIR|locus:2116372 [details] [associations]
symbol:AT4G26680 "AT4G26680" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:1.25.40.10
EMBL:AL035440 PROSITE:PS51375 EMBL:AL161565 TIGRFAMs:TIGR00756
UniGene:At.23755 UniGene:At.71071 Pfam:PF12854 Pfam:PF13041
IPI:IPI00542445 PIR:T04791 RefSeq:NP_001190849.1 RefSeq:NP_194398.1
ProteinModelPortal:Q9SZ10 SMR:Q9SZ10 PaxDb:Q9SZ10 PRIDE:Q9SZ10
EnsemblPlants:AT4G26680.1 EnsemblPlants:AT4G26680.2 GeneID:828775
KEGG:ath:AT4G26680 TAIR:At4g26680 eggNOG:NOG324112
HOGENOM:HOG000243392 InParanoid:Q9SZ10 OMA:CHPNEQT PhylomeDB:Q9SZ10
ProtClustDB:CLSN2686046 Genevestigator:Q9SZ10 Uniprot:Q9SZ10
Length = 521
Score = 133 (51.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 35/135 (25%), Positives = 59/135 (43%)
Query: 171 LKRGFEIFQQMITDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGP 230
L+ ++F +M V PN T+ ++ + D EMAF + M GI + +Y
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNA 383
Query: 231 ALFGFCKLGNTDKAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEILHRLRTLV 290
+FG CK T KA + + + +VP SAL+ K D+ +E+ +
Sbjct: 384 LIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
Query: 291 RQVSESTFKIIEDWF 305
+E TF ++ F
Sbjct: 444 CHPNEQTFNMLVSAF 458
>TAIR|locus:2084978 [details] [associations]
symbol:AT3G04760 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AC011437 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 EMBL:AY056218 EMBL:AY133775 EMBL:AK221573
IPI:IPI00532561 RefSeq:NP_566237.1 UniGene:At.18557
ProteinModelPortal:Q9SR00 SMR:Q9SR00 STRING:Q9SR00 PaxDb:Q9SR00
PRIDE:Q9SR00 EnsemblPlants:AT3G04760.1 GeneID:819636
KEGG:ath:AT3G04760 TAIR:At3g04760 eggNOG:NOG279361
HOGENOM:HOG000238342 InParanoid:Q9SR00 OMA:NTMFSAL PhylomeDB:Q9SR00
ProtClustDB:CLSN2688070 Genevestigator:Q9SR00 Uniprot:Q9SR00
Length = 602
Score = 133 (51.9 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 33/115 (28%), Positives = 53/115 (46%)
Query: 172 KRGFEIFQQMITDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGPA 231
+ G ++ +M ++K DPN T++ + E A +L+K MK G+ P SY P
Sbjct: 315 EEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL 374
Query: 232 LFGFCKLGNTDKAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEILHRL 286
+ FC+ G D A E M G +P+ + +L K D+ EI +L
Sbjct: 375 IAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
>TAIR|locus:2034760 [details] [associations]
symbol:AT1G12300 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AC025416 PIR:A86258
HOGENOM:HOG000015176 Pfam:PF12854 Pfam:PF13041 eggNOG:NOG302308
ProtClustDB:CLSN2682250 EMBL:AK230459 IPI:IPI00520840
RefSeq:NP_172694.1 UniGene:At.42081 ProteinModelPortal:Q0WKV3
SMR:Q0WKV3 EnsemblPlants:AT1G12300.1 GeneID:837784
KEGG:ath:AT1G12300 GeneFarm:4828 TAIR:At1g12300 InParanoid:Q0WKV3
OMA:RRANEAM PhylomeDB:Q0WKV3 Genevestigator:Q0WKV3 Uniprot:Q0WKV3
Length = 637
Score = 131 (51.2 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 54/208 (25%), Positives = 92/208 (44%)
Query: 111 LDMCSKRGDVFEALRLYDDARSNGITLSQHHYNVLLYVCSCKCGSESSENGDRENDSNLG 170
+D K G + A L+++ GIT + YN+L+ C N R +D
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI---GGFC------NAGRWDD---- 316
Query: 171 LKRGFEIFQQMITDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGP 230
G ++ + MI K++PN TF+ + V + A +L K+M GI P +Y
Sbjct: 317 ---GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373
Query: 231 ALFGFCKLGNTDKAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEILHRLRTLV 290
+ GFCK + DKA ++ M G P + L+ A ++D E+ ++ +L
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM-SLR 432
Query: 291 RQVSES-TFKIIEDWFDSVDAAEIGVLN 317
V+++ T+ + F E+G LN
Sbjct: 433 GVVADTVTYNTLIQGF-----CELGKLN 455
>TAIR|locus:2827891 [details] [associations]
symbol:AT2G17670 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0006626 "protein targeting to
mitochondrion" evidence=RCA] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
EMBL:BT004095 EMBL:BT005703 EMBL:AY085478 IPI:IPI00518403
PIR:A84555 PIR:T08865 RefSeq:NP_565422.1 UniGene:At.27997
ProteinModelPortal:Q84J71 IntAct:Q84J71 STRING:Q84J71 PRIDE:Q84J71
EnsemblPlants:AT2G17670.1 GeneID:816274 KEGG:ath:AT2G17670
TAIR:At2g17670 eggNOG:NOG260630 HOGENOM:HOG000238741
InParanoid:Q84J71 OMA:LMNGMCR PhylomeDB:Q84J71
ProtClustDB:CLSN2688210 Genevestigator:Q84J71 Uniprot:Q84J71
Length = 463
Score = 129 (50.5 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 45/161 (27%), Positives = 73/161 (45%)
Query: 122 EALRLYDDARSNGITLSQHHYNVLLYVCSCKCGSESSENGDRENDSNLGLKRGFEIFQQM 181
EA+ +Y + G+ Q YN L++ S K G R ++ + LK M
Sbjct: 283 EAVGVYKKMKEEGVEPDQITYNTLIFGLS-KAG--------RVEEARMYLKT-------M 326
Query: 182 ITDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGPALFGFCKLGNT 241
+ +P+ AT+TS+ K + A L+++M++ G P +Y L G CK
Sbjct: 327 VDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLM 386
Query: 242 DKAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEI 282
DK E+ M SGV E + L++ V + KV + YE+
Sbjct: 387 DKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEV 427
>TAIR|locus:2177028 [details] [associations]
symbol:AT5G12100 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IDA] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0005739 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008270
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
EMBL:AB007727 eggNOG:NOG320495 Pfam:PF12854 Pfam:PF13041
EMBL:BT005769 EMBL:BT006094 EMBL:AK228623 IPI:IPI00526325
RefSeq:NP_196771.1 UniGene:At.32172 ProteinModelPortal:Q9FMQ1
SMR:Q9FMQ1 PaxDb:Q9FMQ1 PRIDE:Q9FMQ1 EnsemblPlants:AT5G12100.1
GeneID:831083 KEGG:ath:AT5G12100 TAIR:At5g12100
HOGENOM:HOG000242783 InParanoid:Q9FMQ1 OMA:AREMEPE PhylomeDB:Q9FMQ1
ProtClustDB:CLSN2686819 Genevestigator:Q9FMQ1 Uniprot:Q9FMQ1
Length = 816
Score = 132 (51.5 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 43/154 (27%), Positives = 73/154 (47%)
Query: 167 SNLGLKRGFEIFQQMITDKVDPNEATFTS-VARLAVAKE--DPEMAFDLVKQMKSFGIPP 223
S++G +G E+F +M D++ P+ + + L K D E FD +M + + P
Sbjct: 193 SDVG--KGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFD---EMLARRLLP 247
Query: 224 KLRSYGPALFGFCKLGNTDKAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEIL 283
L +Y + G+CK GN +K+++V M + P + LLK A V+ +L
Sbjct: 248 SLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVL 307
Query: 284 HRLRTLVRQVSESTFKIIEDWFDSVDAAE--IGV 315
++ L TF I+ D + S + AE +GV
Sbjct: 308 KEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGV 341
>TAIR|locus:2024301 [details] [associations]
symbol:AT1G09820 "AT1G09820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC000132 Pfam:PF12854
IPI:IPI00532576 PIR:D86232 RefSeq:NP_172453.1 UniGene:At.66804
ProteinModelPortal:O04504 SMR:O04504 PaxDb:O04504 PRIDE:O04504
EnsemblPlants:AT1G09820.1 GeneID:837514 KEGG:ath:AT1G09820
GeneFarm:4818 TAIR:At1g09820 eggNOG:NOG263019 HOGENOM:HOG000243970
InParanoid:O04504 OMA:NRITYEI PhylomeDB:O04504
ProtClustDB:CLSN2679505 Genevestigator:O04504 Uniprot:O04504
Length = 606
Score = 129 (50.5 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 30/94 (31%), Positives = 46/94 (48%)
Query: 177 IFQQMITDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGPALFGFC 236
++++MI K+ PN TF V A D+++ MK +G P + SY + G+C
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 237 KLGNTDKAYEVDA---HMGESGVVPEEPELSALL 267
KLG K Y+ DA M E+ V P + L+
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILI 303
>TAIR|locus:2053552 [details] [associations]
symbol:AT2G15630 "AT2G15630" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC006248
Pfam:PF12854 Pfam:PF13041 IPI:IPI00548249 PIR:D84531
RefSeq:NP_179165.1 UniGene:At.52753 ProteinModelPortal:Q9ZQF1
SMR:Q9ZQF1 PaxDb:Q9ZQF1 PRIDE:Q9ZQF1 EnsemblPlants:AT2G15630.1
GeneID:816056 KEGG:ath:AT2G15630 TAIR:At2g15630 eggNOG:NOG248949
HOGENOM:HOG000083877 InParanoid:Q9ZQF1 OMA:EILIREI PhylomeDB:Q9ZQF1
ProtClustDB:CLSN2683601 Genevestigator:Q9ZQF1 Uniprot:Q9ZQF1
Length = 627
Score = 129 (50.5 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 37/162 (22%), Positives = 74/162 (45%)
Query: 126 LYDDARSNGITLSQHHYNVLLYVCSCKCGSESSENGDRENDSNLGLKRGFEIFQQMITDK 185
L + R GI L YN+L+ + C ++GD K+ F + +M+TD
Sbjct: 384 LIREIREKGIVLDSVTYNILI---NGYC-----QHGDA--------KKAFALHDEMMTDG 427
Query: 186 VDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGPALFGFCKLGNTDKAY 245
+ P + T+TS+ + K A +L +++ G+ P L + G C +GN D+A+
Sbjct: 428 IQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAF 487
Query: 246 EVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEILHRLR 287
+ M + P++ + L++ K ++ E++ ++
Sbjct: 488 SLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMK 529
>TAIR|locus:2086032 [details] [associations]
symbol:PPR40 "pentatricopeptide (PPR) domain protein 40"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006979 "response to oxidative stress"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
[GO:0042775 "mitochondrial ATP synthesis coupled electron
transport" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0005739 GO:GO:0009737 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006979 GO:GO:0009651 Gene3D:1.25.40.10 EMBL:AB026636
PROSITE:PS51375 Pfam:PF13812 TIGRFAMs:TIGR00756 GO:GO:0042775
Pfam:PF13041 IPI:IPI00518270 RefSeq:NP_188314.1 UniGene:At.65096
ProteinModelPortal:Q9LSQ2 SMR:Q9LSQ2 STRING:Q9LSQ2 PaxDb:Q9LSQ2
PRIDE:Q9LSQ2 EnsemblPlants:AT3G16890.1 GeneID:820944
KEGG:ath:AT3G16890 TAIR:At3g16890 eggNOG:NOG329090
HOGENOM:HOG000244117 InParanoid:Q9LSQ2 OMA:CALVESW PhylomeDB:Q9LSQ2
ProtClustDB:CLSN2684178 Genevestigator:Q9LSQ2 Uniprot:Q9LSQ2
Length = 659
Score = 133 (51.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 30/112 (26%), Positives = 56/112 (50%)
Query: 171 LKRGFEIFQQMITDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGP 230
+K F+ F++M+ ++PNE T+ + R + D + + L +MK G+ P L +Y
Sbjct: 511 IKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNA 570
Query: 231 ALFGFCKLGNTDKAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEI 282
+ FCK+ KA E+ M G+ P+ S L+K ++ + + E+
Sbjct: 571 TIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREM 622
Score = 126 (49.4 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 34/122 (27%), Positives = 65/122 (53%)
Query: 171 LKRGFEIFQQMITDKVDPNEATFTSVAR-LAVAKEDPEMAFDLVKQMKSFGIPPKLRSYG 229
+K+ + ++++ P+ TF+ + L AKE + AFD K+M +GI P +Y
Sbjct: 476 VKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKD-AFDCFKEMLEWGIEPNEITYN 534
Query: 230 PALFGFCKLGNTDKAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEILHRLRTL 289
+ C G+TD++ ++ A M E+G+ P+ +A ++ +KV K E+L +T+
Sbjct: 535 ILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELL---KTM 591
Query: 290 VR 291
+R
Sbjct: 592 LR 593
Score = 41 (19.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 111 LDMCSKRGDVFEALRLYDDARSNGITLSQHHYNVLLY-VC 149
+D K + A + RS+G + YN+L++ VC
Sbjct: 187 IDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVC 226
>TAIR|locus:2175443 [details] [associations]
symbol:AT5G04810 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] InterPro:IPR000504 InterPro:IPR011990
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL162972 EMBL:AB008271
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041
EMBL:AF424618 EMBL:AK229672 IPI:IPI00537591 PIR:T48477
RefSeq:NP_568141.2 UniGene:At.20448 ProteinModelPortal:Q0WMY5
SMR:Q0WMY5 PaxDb:Q0WMY5 PRIDE:Q0WMY5 EnsemblPlants:AT5G04810.1
GeneID:830360 KEGG:ath:AT5G04810 TAIR:At5g04810 eggNOG:NOG243485
HOGENOM:HOG000241136 InParanoid:Q0WMY5 OMA:TLIKGWA PhylomeDB:Q0WMY5
ProtClustDB:CLSN2681028 Genevestigator:Q0WMY5 Uniprot:Q0WMY5
Length = 952
Score = 127 (49.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 31/134 (23%), Positives = 62/134 (46%)
Query: 175 FEIFQQMITDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGPALFG 234
F +F+ M+ + + P+ + ++ + + A VK+M+ P R++ P + G
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHG 598
Query: 235 FCKLGNTDKAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEILHRLRTLVRQVS 294
+ K G+ ++ EV M G VP + L+ V+ ++++K EIL + +
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Query: 295 ESTFKIIEDWFDSV 308
E T+ I + SV
Sbjct: 659 EHTYTKIMQGYASV 672
Score = 51 (23.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 116 KRGDVFEALRLYDDARSNGITLSQHHYNVLLY 147
+RGD+ A ++ R+ GIT + Y L++
Sbjct: 321 RRGDMHRARETFERMRARGITPTSRIYTSLIH 352
>TAIR|locus:2025747 [details] [associations]
symbol:AT1G80880 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AC011713 Pfam:PF13041 EMBL:DQ446448
IPI:IPI00545592 PIR:F96841 RefSeq:NP_178203.1 UniGene:At.52583
ProteinModelPortal:Q9SAH2 PRIDE:Q9SAH2 EnsemblPlants:AT1G80880.1
GeneID:844428 KEGG:ath:AT1G80880 GeneFarm:4813 TAIR:At1g80880
eggNOG:NOG324728 HOGENOM:HOG000006320 InParanoid:Q9SAH2 OMA:KRIWREM
PhylomeDB:Q9SAH2 ProtClustDB:CLSN2682114 Genevestigator:Q9SAH2
Uniprot:Q9SAH2
Length = 540
Score = 93 (37.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 109 HKLDMCSKRGDVFEALRLYDDARSNGITLSQHHYNVLLYVCSCK-CGSESSENGDRENDS 167
H + SK G++F++LRLYD+ + G+ YN L+YV + + C E+ + + N+
Sbjct: 299 HMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEE 358
Query: 168 NLGLKRGFEIFQQMI 182
GLK + MI
Sbjct: 359 --GLKPDSVTYNSMI 371
Score = 80 (33.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 26/100 (26%), Positives = 40/100 (40%)
Query: 169 LGLKRGFEIFQQMITDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSY 228
+ ++ E+ QM + P E TF + + PE A + +M F I Y
Sbjct: 409 VNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALY 468
Query: 229 GPALFGFCKLGNTDKAYEVDAHMGESGVVPEEPELSALLK 268
+ G G +KA E+ + M G V P L LL+
Sbjct: 469 LATIQGLLSCGWLEKAREIYSEMKSKGFVGN-PMLQKLLE 507
>TAIR|locus:2038426 [details] [associations]
symbol:AT1G63320 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002684
PROSITE:PS51375 TIGRFAMs:TIGR00756 Pfam:PF13041 IPI:IPI00537083
RefSeq:NP_176521.2 UniGene:At.52339 ProteinModelPortal:F4I221
SMR:F4I221 EnsemblPlants:AT1G63320.1 GeneID:842638
KEGG:ath:AT1G63320 OMA:REICEAR Uniprot:F4I221
Length = 189
Score = 116 (45.9 bits), Expect = 0.00015, P = 0.00015
Identities = 35/138 (25%), Positives = 66/138 (47%)
Query: 176 EIFQQMITDKVDPNEATFTSV-------ARL--AVAKEDPEMAFDLVKQMKSFGIPPKLR 226
EIF++M++D V P+ T+ + +L A+ E +DL + G+ P +
Sbjct: 37 EIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVV 96
Query: 227 SYGPALFGFCKLGNTDKAYEVDAHMGESGVVPEEPELSALLKLSV-DAKKVDKVYEILHR 285
+Y + GFCK G ++AY + M E G +P+ + L++ + D K E++
Sbjct: 97 TYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA-ELIKE 155
Query: 286 LRTLVRQVSESTFKIIED 303
+R+ ST+ ++ D
Sbjct: 156 MRSCRFAGDASTYGLVTD 173
>TAIR|locus:2139732 [details] [associations]
symbol:AT4G11690 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR PROSITE:PS51375 EMBL:AL161532
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AL049500 Pfam:PF12854
Pfam:PF13041 EMBL:DQ446820 IPI:IPI00538749 PIR:T04216
RefSeq:NP_192906.1 UniGene:At.54280 ProteinModelPortal:Q9T0D6
SMR:Q9T0D6 PRIDE:Q9T0D6 EnsemblPlants:AT4G11690.1 GeneID:826774
KEGG:ath:AT4G11690 TAIR:At4g11690 eggNOG:NOG289492
HOGENOM:HOG000077602 InParanoid:Q9T0D6 OMA:MIKGCCE PhylomeDB:Q9T0D6
ProtClustDB:CLSN2685519 Genevestigator:Q9T0D6 Uniprot:Q9T0D6
Length = 566
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 39/172 (22%), Positives = 79/172 (45%)
Query: 111 LDMCSKRGDVFEALRLYDDARSNGITLSQHHYNVLLYVCSCKCGSESSENGDRENDSNLG 170
++ K G +A +++D+ R G++ + YN L+ G E + N++N
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLI-------GGLCREM--KLNEAN-- 323
Query: 171 LKRGFEIFQQMITDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGP 230
++ QM +D ++PN T+ ++ A L + +KS G+ P L +Y
Sbjct: 324 -----KVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 231 ALFGFCKLGNTDKAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEI 282
+ GFC+ G+T A ++ M E G+ P + + L+ + ++K ++
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL 430
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 48/205 (23%), Positives = 87/205 (42%)
Query: 102 SPEGVLRHKL-DMCSKRGDVFEALRLYDDARSNGITLSQHHYNVLLYVCSCKCGSESSEN 160
SP V+ L D C K+G++ +A L+ + G+ ++ Y VL+ N
Sbjct: 195 SPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLI-------------N 241
Query: 161 GDRENDSNLGLKRGFEIFQQMITDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFG 220
G +N K+GFE++++M D V PN T+ V + AF + +M+ G
Sbjct: 242 GLFKNGVK---KQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
Query: 221 IPPKLRSYGPALFGFCKLGNTDKAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVY 280
+ + +Y + G C+ ++A +V M G+ P + L+ K+ K
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 281 EILHRLRTLVRQVSESTFKIIEDWF 305
+ L++ S T+ I+ F
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGF 383
>TAIR|locus:2025580 [details] [associations]
symbol:AT1G08610 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AC003981 Pfam:PF12854 Pfam:PF13041
HOGENOM:HOG000238342 IPI:IPI00542603 PIR:T00714 RefSeq:NP_172337.1
UniGene:At.42258 ProteinModelPortal:Q9FRS4 SMR:Q9FRS4 STRING:Q9FRS4
PRIDE:Q9FRS4 EnsemblPlants:AT1G08610.1 GeneID:837383
KEGG:ath:AT1G08610 GeneFarm:4798 TAIR:At1g08610 eggNOG:NOG272737
InParanoid:Q9FRS4 OMA:NTLIRCM PhylomeDB:Q9FRS4
ProtClustDB:CLSN2682820 Genevestigator:Q9FRS4 Uniprot:Q9FRS4
Length = 559
Score = 119 (46.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 34/132 (25%), Positives = 65/132 (49%)
Query: 171 LKRGFEIFQQMITDKVDPNEATFTSVARLAVAKEDP-EMAFDLVKQMKSFGIPPKLRSYG 229
L R + F QM+ K P+ T+ +V A++KE + A +L+ +K+ PP L +Y
Sbjct: 365 LSRAIDFFYQMLEQKCLPDIVTYNTVLG-AMSKEGMVDDAIELLGLLKNTCCPPGLITYN 423
Query: 230 PALFGFCKLGNTDKAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEILHRLRTL 289
+ G K G KA E+ M ++G+ P++ +L+ A V++ ++L
Sbjct: 424 SVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNR 483
Query: 290 VRQVSESTFKII 301
+ ST++++
Sbjct: 484 GNGIRGSTYRLV 495
Score = 52 (23.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 116 KRGDVFEALRLYDDARSNGITLSQHHYNVLLY-VCSCKCGSESSE 159
+RG++ E + S+G+ L+ YN LL+ +CS + E E
Sbjct: 291 RRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEE 335
>TAIR|locus:2039415 [details] [associations]
symbol:AT2G16880 "AT2G16880" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC005167 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
EMBL:AY072079 EMBL:AY096663 IPI:IPI00543040 PIR:D84545
RefSeq:NP_179280.1 UniGene:At.40223 ProteinModelPortal:Q9ZVX5
SMR:Q9ZVX5 IntAct:Q9ZVX5 PaxDb:Q9ZVX5 PRIDE:Q9ZVX5
EnsemblPlants:AT2G16880.1 GeneID:816189 KEGG:ath:AT2G16880
TAIR:At2g16880 eggNOG:NOG304367 HOGENOM:HOG000239828
InParanoid:Q9ZVX5 OMA:DVVTCNT PhylomeDB:Q9ZVX5
ProtClustDB:CLSN2683765 Genevestigator:Q9ZVX5 Uniprot:Q9ZVX5
Length = 743
Score = 125 (49.1 bits), Expect = 0.00029, P = 0.00029
Identities = 40/185 (21%), Positives = 90/185 (48%)
Query: 120 VFEALRLYDDARSNGITLSQHHYNVLLYVCSCKCGSESSENGDRENDSNLGLKRGFEIFQ 179
+ A ++DD G++L+ +NVL+ + C E+ LG+ +
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLV---NGYCLEGKLEDA-------LGM------LE 228
Query: 180 QMITD-KVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGPALFGFCKL 238
+M+++ KV+P+ T+ ++ + K +L+ MK G+ P +Y ++G+CKL
Sbjct: 229 RMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKL 288
Query: 239 GNTDKAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEILHRLRTLVRQVSESTF 298
G+ +A+++ M ++ V+P+ + L+ +A + + E++ +++L Q T+
Sbjct: 289 GSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTY 348
Query: 299 KIIED 303
+ D
Sbjct: 349 NTLID 353
>TAIR|locus:2065428 [details] [associations]
symbol:AT2G01740 "AT2G01740" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC006069 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 IPI:IPI00529210 PIR:E84428 RefSeq:NP_178283.1
UniGene:At.47033 UniGene:At.66449 ProteinModelPortal:Q9ZUA2
SMR:Q9ZUA2 EnsemblPlants:AT2G01740.1 GeneID:814704
KEGG:ath:AT2G01740 GeneFarm:5003 TAIR:At2g01740 eggNOG:NOG248754
HOGENOM:HOG000241911 InParanoid:Q9ZUA2 OMA:LDITAYG PhylomeDB:Q9ZUA2
ProtClustDB:CLSN2683545 Genevestigator:Q9ZUA2 Uniprot:Q9ZUA2
Length = 559
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 39/176 (22%), Positives = 80/176 (45%)
Query: 111 LDMCSKRGDVFEALRLYDDARSNGITLSQHHYNVLLYVCSCKCGSESSENGDRENDSNLG 170
+D K GD+ A+ LY + R ++L+ Y L+ CK G
Sbjct: 205 IDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGF-CKKGE--------------- 248
Query: 171 LKRGFEIFQQMITDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGP 230
++R E++ +M+ D+V+PN +T++ + D + A + +M + G+ + +YG
Sbjct: 249 MQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGV 308
Query: 231 ALFGFCKLGNTDKAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEILHRL 286
+ G C G +A E+ M +S +VP+ + ++ + ++ + H+L
Sbjct: 309 IISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKL 364
>TAIR|locus:2061310 [details] [associations]
symbol:GUN1 "AT2G31400" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0031930 "mitochondria-nucleus
signaling pathway" evidence=IMP] [GO:0010019 "chloroplast-nucleus
signaling pathway" evidence=IMP] InterPro:IPR011990
InterPro:IPR002885 INTERPRO:IPR002625 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0031930
Gene3D:1.25.40.10 EMBL:AC007169 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 SMART:SM00463 PROSITE:PS50828
GO:GO:0010019 Pfam:PF13041 EMBL:BX819946 IPI:IPI00538422 PIR:C84720
RefSeq:NP_180698.1 UniGene:At.20815 ProteinModelPortal:Q9SIC9
SMR:Q9SIC9 EnsemblPlants:AT2G31400.1 GeneID:817698
KEGG:ath:AT2G31400 GeneFarm:4937 TAIR:At2g31400 eggNOG:NOG313285
HOGENOM:HOG000030408 InParanoid:Q9SIC9 OMA:FEDASML PhylomeDB:Q9SIC9
ProtClustDB:CLSN2683142 Genevestigator:Q9SIC9 Uniprot:Q9SIC9
Length = 918
Score = 125 (49.1 bits), Expect = 0.00038, P = 0.00038
Identities = 40/180 (22%), Positives = 79/180 (43%)
Query: 111 LDMCSKRGDVFEAL-RLYDDARSNGITLSQHHYNVLLYVCSCKCGSESSENGDRENDSNL 169
+D C K G F+ + + +D+ + NG+ + +N LL VCS G E NL
Sbjct: 310 IDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCS--------RGGLWEAARNL 361
Query: 170 GLKRGFEIFQQMITDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYG 229
F +M +++ + ++ ++ ++AF+++ QM I P + SY
Sbjct: 362 --------FDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 230 PALFGFCKLGNTDKAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEILHRLRTL 289
+ GF K G D+A + M G+ + + LL + + ++ +IL + ++
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
>TAIR|locus:2026192 [details] [associations]
symbol:RPF2 "rna processing factor 2" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0000966 "RNA 5'-end processing" evidence=IMP]
[GO:0003723 "RNA binding" evidence=IDA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 GO:GO:0003723 Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC007190 TIGRFAMs:TIGR00756 EMBL:AC005698 GO:GO:0000966
eggNOG:NOG320495 HOGENOM:HOG000015176 ProtClustDB:CLSN2682329
Pfam:PF12854 Pfam:PF13041 IPI:IPI00518837 RefSeq:NP_176454.1
UniGene:At.65045 ProteinModelPortal:Q9SXD1 SMR:Q9SXD1 STRING:Q9SXD1
PaxDb:Q9SXD1 PRIDE:Q9SXD1 EnsemblPlants:AT1G62670.1 GeneID:842564
KEGG:ath:AT1G62670 GeneFarm:4355 TAIR:At1g62670 InParanoid:Q9SXD1
OMA:ADEMMER PhylomeDB:Q9SXD1 ArrayExpress:Q9SXD1
Genevestigator:Q9SXD1 Uniprot:Q9SXD1
Length = 630
Score = 122 (48.0 bits), Expect = 0.00050, P = 0.00050
Identities = 30/116 (25%), Positives = 58/116 (50%)
Query: 171 LKRGFEIFQQMITDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGP 230
++ G E+F++M + N T+ + + D +MA ++ K+M S G+PP + +Y
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 231 ALFGFCKLGNTDKAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEILHRL 286
L G CK G +KA V ++ S + P + +++ A KV+ +++ L
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527
>TAIR|locus:2024296 [details] [associations]
symbol:AT1G09900 "AT1G09900" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IDA]
InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0016020 Gene3D:1.25.40.10
PROSITE:PS51375 TIGRFAMs:TIGR00756 EMBL:AC000132 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000238342 IPI:IPI00520780
RefSeq:NP_172461.1 UniGene:At.51542 ProteinModelPortal:Q3EDF8
SMR:Q3EDF8 PaxDb:Q3EDF8 PRIDE:Q3EDF8 EnsemblPlants:AT1G09900.1
GeneID:837522 KEGG:ath:AT1G09900 GeneFarm:4819 TAIR:At1g09900
eggNOG:NOG276873 InParanoid:Q3EDF8 OMA:INFLCRK PhylomeDB:Q3EDF8
ProtClustDB:CLSN2679516 Genevestigator:Q3EDF8 Uniprot:Q3EDF8
Length = 598
Score = 120 (47.3 bits), Expect = 0.00076, P = 0.00076
Identities = 44/171 (25%), Positives = 70/171 (40%)
Query: 116 KRGDVFEALRLYDDARSNGITLSQHHYNVLLYVCSCKCGSESSENGDRENDSNLGLKRGF 175
K G + EA++ +D S+G + +N++L C G R D+
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILR-SMCSTG--------RWMDAE------- 329
Query: 176 EIFQQMITDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGPALFGF 235
++ M+ P+ TF + K A D++++M G P SY P L GF
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Query: 236 CKLGNTDKAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEILHRL 286
CK D+A E M G P+ + +L KV+ EIL++L
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
>TAIR|locus:2015494 [details] [associations]
symbol:RPF3 "RNA processing factor 3" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006397 "mRNA processing" evidence=IMP]
InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0009507 EMBL:AC011000
GO:GO:0006397 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF13812
TIGRFAMs:TIGR00756 eggNOG:NOG320495 HOGENOM:HOG000015176
ProtClustDB:CLSN2682329 Pfam:PF12854 Pfam:PF13041 EMBL:AY056104
IPI:IPI00518937 PIR:H96653 RefSeq:NP_176481.2 UniGene:At.70258
ProteinModelPortal:Q9LQ14 SMR:Q9LQ14 EnsemblPlants:AT1G62930.1
GeneID:842594 KEGG:ath:AT1G62930 GeneFarm:4779 TAIR:At1g62930
InParanoid:Q9LQ14 OMA:YSMLINC PhylomeDB:Q9LQ14
Genevestigator:Q9LQ14 Uniprot:Q9LQ14
Length = 629
Score = 120 (47.3 bits), Expect = 0.00082, P = 0.00082
Identities = 29/112 (25%), Positives = 59/112 (52%)
Query: 171 LKRGFEIFQQMITDKVDPNEATFTSVARLAVAKEDPEMAFDLVKQMKSFGIPPKLRSYGP 230
++ G E+F++M + N T+ ++ + D +MA + K+M S G+PP + +Y
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 231 ALFGFCKLGNTDKAYEVDAHMGESGVVPEEPELSALLKLSVDAKKVDKVYEI 282
L G CK G +KA V ++ +S + P+ + +++ A KV+ +++
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 593 575 0.00080 120 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 627 (67 KB)
Total size of DFA: 355 KB (2176 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 48.75u 0.19s 48.94t Elapsed: 00:00:02
Total cpu time: 48.75u 0.19s 48.94t Elapsed: 00:00:02
Start: Fri May 10 08:55:08 2013 End: Fri May 10 08:55:10 2013