BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007685
(593 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94A08|RFS2_ARATH Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis
thaliana GN=RFS2 PE=2 SV=2
Length = 773
Score = 1035 bits (2676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/594 (81%), Positives = 536/594 (90%), Gaps = 3/594 (0%)
Query: 1 MQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQ 60
MQTF HREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLS GGTPPKFLIIDDGWQ
Sbjct: 182 MQTFHHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLIIDDGWQ 241
Query: 61 QIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNVK 120
QIENK K+E NC+VQEGAQFA+RL GIKEN+KFQK Q QVSGLK VVD +KQ HNVK
Sbjct: 242 QIENKEKDE-NCVVQEGAQFATRLVGIKENAKFQKSDQKDTQVSGLKSVVDNAKQRHNVK 300
Query: 121 YVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHP 180
VY WHALAGYWGGVKPAA GMEHYD+ALAYPV SPGV+GNQPDIVMDSLAVHGLGLV+P
Sbjct: 301 QVYAWHALAGYWGGVKPAASGMEHYDSALAYPVQSPGVLGNQPDIVMDSLAVHGLGLVNP 360
Query: 181 KKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFP 240
KKVFNFYNELH+YLASCG+DGVKVDVQNIIETLGAG GGRVSLTRSY QALEASIARNF
Sbjct: 361 KKVFNFYNELHSYLASCGIDGVKVDVQNIIETLGAGLGGRVSLTRSYQQALEASIARNFT 420
Query: 241 DNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDW 300
DNGCISCMCHNTDG+YS+KQTA++RASDD+YPRDPASHTIHI+SVAYN+LFLGEFMQPDW
Sbjct: 421 DNGCISCMCHNTDGLYSAKQTAIVRASDDFYPRDPASHTIHIASVAYNSLFLGEFMQPDW 480
Query: 301 DMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRD 360
DMFHSLHP AEYH AARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRA+LPGRPTRD
Sbjct: 481 DMFHSLHPTAEYHAAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAKLPGRPTRD 540
Query: 361 CLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVT 420
CLFADPARDG SLLK+WN+NK +G+VGVFNCQGAGWCK TKK +IHD SPGTLT S+R
Sbjct: 541 CLFADPARDGISLLKIWNMNKFTGIVGVFNCQGAGWCKETKKNQIHDTSPGTLTGSIRAD 600
Query: 421 DVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKEISSNI 480
D + ++Q+AG W+GD+IVYA+RSGEVVRLPKGAS+P+TLKVLEYELFH PLKEI+ NI
Sbjct: 601 DADLISQVAGEDWSGDSIVYAYRSGEVVRLPKGASIPLTLKVLEYELFHISPLKEITENI 660
Query: 481 SFAAIGLLDMFNSGGAVENVEV-HMSEKKPDLFDGEVSSELTTSLSDNRSPTATISLKVR 539
SFA IGL+DMFNS GA+E++++ H+++K P+ FDGE+SS + +LSDNRSPTA +S+ VR
Sbjct: 661 SFAPIGLVDMFNSSGAIESIDINHVTDKNPEFFDGEISSA-SPALSDNRSPTALVSVSVR 719
Query: 540 GCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWPVEIQV 593
GCGRFG YSSQRPLKC V S +TDFTYD+ GL+T+ LPV EEM+RW VEI V
Sbjct: 720 GCGRFGAYSSQRPLKCAVESTETDFTYDAEVGLVTLNLPVTREEMFRWHVEILV 773
>sp|Q84VX0|RFS1_ARATH Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis
thaliana GN=RFS1 PE=2 SV=1
Length = 754
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/597 (59%), Positives = 444/597 (74%), Gaps = 29/597 (4%)
Query: 1 MQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQ 60
+QTF+HRE+KK+P L+WFGWCTWDAFYT+VTA+ V +GL+SL AGG PKF+IIDDGWQ
Sbjct: 182 LQTFSHRERKKMPDMLNWFGWCTWDAFYTNVTAKDVKQGLESLKAGGVTPKFVIIDDGWQ 241
Query: 61 QIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVS----GLKHVVDESKQN 116
+ + A FA+RLT IKEN KFQK + +V L HV+ + K N
Sbjct: 242 SV-GMDETSVEFNADNAANFANRLTHIKENHKFQKDGKEGHRVDDPSLSLGHVITDIKSN 300
Query: 117 HNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLG 176
+++KYVYVWHA+ GYWGGVKP GMEHY++ +AYPV+SPGVM ++ ++S+ +GLG
Sbjct: 301 NSLKYVYVWHAITGYWGGVKPGVSGMEHYESKVAYPVSSPGVMSSENCGCLESITKNGLG 360
Query: 177 LVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIA 236
LV+P+KVF+FYN+LH+YLAS GVDGVKVDVQNI+ETLGAGHGGRV L + YHQALEASI+
Sbjct: 361 LVNPEKVFSFYNDLHSYLASVGVDGVKVDVQNILETLGAGHGGRVKLAKKYHQALEASIS 420
Query: 237 RNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFM 296
RNFPDNG ISCM HNTDG+YS+K+TAVIRASDD++PRDPASHTIHI+SVAYNTLFLGEFM
Sbjct: 421 RNFPDNGIISCMSHNTDGLYSAKKTAVIRASDDFWPRDPASHTIHIASVAYNTLFLGEFM 480
Query: 297 QPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGR 356
QPDWDMFHSLHP AEYH AARAVGGCAIYVSDKPG H+F+LLRKLVL DGS+LRA+LPGR
Sbjct: 481 QPDWDMFHSLHPMAEYHAAARAVGGCAIYVSDKPGQHDFNLLRKLVLRDGSILRAKLPGR 540
Query: 357 PTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTAS 416
PT DC F+DP RD SLLK+WN+N+ +GV+GVFNCQGAGWCK K+ IHD+ PGT++
Sbjct: 541 PTSDCFFSDPVRDNKSLLKIWNLNEFTGVIGVFNCQGAGWCKNEKRYLIHDQEPGTISGC 600
Query: 417 VRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKEI 476
VR DV + ++A W GD+IVY+H GE+V LPK S+PVTL EYE+F P+KE
Sbjct: 601 VRTNDVHYLHKVAAFEWTGDSIVYSHLRGELVYLPKDTSLPVTLMPREYEVFTVVPVKEF 660
Query: 477 SSNISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLFDGEVSSELTTSLSDNRSPTATISL 536
S FA +GL++MFNSGGA+ ++ D+ + +
Sbjct: 661 SDGSKFAPVGLMEMFNSGGAIVSLRY-----------------------DDEGTKFVVRM 697
Query: 537 KVRGCGRFGIYSS-QRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWPVEIQ 592
K+RG G G+YSS +RP TV S ++ Y+ +GL+T TL VPE+E+Y W V IQ
Sbjct: 698 KLRGSGLVGVYSSVRRPRSVTVDSDDVEYRYEPESGLVTFTLGVPEKELYLWDVVIQ 754
>sp|Q8RX87|RFS6_ARATH Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis
thaliana GN=RFS6 PE=2 SV=2
Length = 749
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/596 (54%), Positives = 420/596 (70%), Gaps = 39/596 (6%)
Query: 1 MQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQ 60
+ +F R +KKLP +D+FGWCTWDAFY +VT EGV+ GLKSL+AGGTPPKF+IIDDGWQ
Sbjct: 188 LNSFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLKSLAAGGTPPKFVIIDDGWQ 247
Query: 61 QIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNVK 120
+E E+ +E F RLTGIKEN KF+KK + G+K++V +K+ H +K
Sbjct: 248 SVERDATVEAGDEKKESPIF--RLTGIKENEKFKKK---DDPNVGIKNIVKIAKEKHGLK 302
Query: 121 YVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHP 180
YVYVWHA+ GYWGGV+P E Y + + YP S GV+ N P D + + GLGLV P
Sbjct: 303 YVYVWHAITGYWGGVRPG----EEYGSVMKYPNMSKGVVENDPTWKTDVMTLQGLGLVSP 358
Query: 181 KKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFP 240
KKV+ FYNELH+YLA GVDGVKVDVQ ++ETLG G GGRV LTR +HQAL++S+A+NFP
Sbjct: 359 KKVYKFYNELHSYLADAGVDGVKVDVQCVLETLGGGLGGRVELTRQFHQALDSSVAKNFP 418
Query: 241 DNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISSVAYNTLFLGEFMQPDW 300
DNGCI+CM HNTD +Y SKQ AVIRASDD+YPRDP SHTIHI+SVAYN++FLGEFMQPDW
Sbjct: 419 DNGCIACMSHNTDALYCSKQAAVIRASDDFYPRDPVSHTIHIASVAYNSVFLGEFMQPDW 478
Query: 301 DMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRD 360
DMFHS+HPAAEYH +ARA+ G +YVSD PG HNF+LLRKLVLPDGS+LRA+LPGRPTRD
Sbjct: 479 DMFHSVHPAAEYHASARAISGGPLYVSDSPGKHNFELLRKLVLPDGSILRARLPGRPTRD 538
Query: 361 CLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVT 420
CLFADPARDG SLLK+WN+NK +GV+GV+NCQGA W +K H +LT S+R
Sbjct: 539 CLFADPARDGVSLLKIWNMNKYTGVLGVYNCQGAAWSSTERKNIFHQTKTDSLTGSIRGR 598
Query: 421 DVENMAQIAG--AGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKEISS 478
DV ++++ + WNGD VY+ GE++ +P S+PV+LK+ E+E+F P+ +
Sbjct: 599 DVHSISEASTDPTTWNGDCAVYSQSRGELIVMPYNVSLPVSLKIREHEIFTVSPISHLVD 658
Query: 479 NISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLFDGEVSSELTTSLSDNRSPTATISLKV 538
+SFA IGL++M+NSGGA+E + + K + ++V
Sbjct: 659 GVSFAPIGLVNMYNSGGAIEGLRYEAEKMK-------------------------VVMEV 693
Query: 539 RGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTL---PVPEEEMYRWPVEI 591
+GCG+FG YSS +P +C V S + F YDS++GL+T L P+ + + VE+
Sbjct: 694 KGCGKFGSYSSVKPKRCVVESNEIAFEYDSSSGLVTFELDKMPIENKRFHLIQVEL 749
>sp|Q8VWN6|RFS_PEA Galactinol--sucrose galactosyltransferase OS=Pisum sativum GN=RFS
PE=1 SV=1
Length = 798
Score = 415 bits (1066), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/597 (37%), Positives = 335/597 (56%), Gaps = 46/597 (7%)
Query: 1 MQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQ 60
+ TF E+K PS ++ FGWCTWDAFY V +GV EG+K+L+ GG PP F+IIDDGWQ
Sbjct: 217 LGTFKTLEEKTPPSIIEKFGWCTWDAFYLKVHPKGVWEGVKALTDGGCPPGFVIIDDGWQ 276
Query: 61 QI---ENKPKEESNCI--VQEGAQFASRLTGIKENSKFQK--KCQNSEQVSGLKHVVDES 113
I ++ P E + + G Q RL +EN KF++ N + + V D
Sbjct: 277 SISHDDDDPVTERDGMNRTSAGEQMPCRLIKYEENYKFREYENGDNGGKKGLVGFVRDLK 336
Query: 114 KQNHNVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVH 173
++ +V+ VYVWHAL GYWGGV+P GM + + P SPGV D+ +D + +
Sbjct: 337 EEFRSVESVYVWHALCGYWGGVRPKVCGMP--EAKVVVPKLSPGVKMTMEDLAVDKIVEN 394
Query: 174 GLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEA 233
G+GLV P ++ +H++L S G+DGVKVDV +++E L +GGRV L ++Y++AL +
Sbjct: 395 GVGLVPPNLAQEMFDGIHSHLESAGIDGVKVDVIHLLELLSEEYGGRVELAKAYYKALTS 454
Query: 234 SIARNFPDNGCISCMCHNTDG-IYSSKQTAVIRASDDYYPRDPAS--------HTIHISS 284
S+ ++F NG I+ M H D + ++ ++ R DD++ DP+ H+
Sbjct: 455 SVNKHFKGNGVIASMEHCNDFFLLGTEAISLGRVGDDFWCCDPSGDPNGTYWLQGCHMVH 514
Query: 285 VAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLP 344
AYN+L++G F+ PDWDMF S HP AE+H A+RA+ G +YVSD GNHNF LL+ VLP
Sbjct: 515 CAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPVYVSDCVGNHNFKLLKSFVLP 574
Query: 345 DGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTR 404
DGS+LR Q PTRDCLF DP +G ++LK+WN+NK +GV+G+FNCQG GWC T++ +
Sbjct: 575 DGSILRCQHYALPTRDCLFEDPLHNGKTMLKIWNLNKYAGVLGLFNCQGGGWCPETRRNK 634
Query: 405 IHDESPGTLTASVRVTDVENMAQIAGAGWNGDAI--VYAHRSGEVVRLPKGASVPVTLKV 462
E +T D+E G + VY + ++ + + V+L+
Sbjct: 635 SASEFSHAVTCYASPEDIEWCNGKTPMDIKGVDVFAVYFFKEKKLSLMKCSDRLEVSLEP 694
Query: 463 LEYELFHFCPLKEISSN-ISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLFDGEVSSELT 521
+EL PLK S I FA IGL++M NSGGAV+++E FD S
Sbjct: 695 FSFELMTVSPLKVFSKRLIQFAPIGLVNMLNSGGAVQSLE----------FDDSAS---- 740
Query: 522 TSLSDNRSPTATISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLP 578
+ + VRGCG +++S++P+ C + + +F Y+ + + P
Sbjct: 741 -----------LVKIGVRGCGELSVFASEKPVCCKIDGVSVEFDYEDKMVRVQILWP 786
>sp|Q5VQG4|RFS_ORYSJ Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp.
japonica GN=RFS PE=1 SV=1
Length = 783
Score = 405 bits (1040), Expect = e-112, Method: Compositional matrix adjust.
Identities = 234/597 (39%), Positives = 325/597 (54%), Gaps = 56/597 (9%)
Query: 1 MQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQ 60
+ TF E+K P +D FGWCTWDAFY V EGV EG++ L+ GG PP ++IDDGWQ
Sbjct: 209 LGTFRLMEEKTPPPIVDKFGWCTWDAFYLKVHPEGVWEGVRRLADGGCPPGLVLIDDGWQ 268
Query: 61 QIENKPKE-----ESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQ 115
I + + E G Q RL +EN KF+ E G+ V E K
Sbjct: 269 SICHDDDDLGSGAEGMNRTSAGEQMPCRLIKFQENYKFR------EYKGGMGGFVREMKA 322
Query: 116 NH-NVKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHG 174
V+ VYVWHAL GYWGG++P A G+ + P SPG+ D+ +D + +G
Sbjct: 323 AFPTVEQVYVWHALCGYWGGLRPGAPGLP--PAKVVAPRLSPGLQRTMEDLAVDKIVNNG 380
Query: 175 LGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEAS 234
+GLV P++ Y LH++L + G+DGVKVDV +++E + +GGRV L ++Y L S
Sbjct: 381 VGLVDPRRARELYEGLHSHLQASGIDGVKVDVIHLLEMVCEEYGGRVELAKAYFAGLTES 440
Query: 235 IARNFPDNGCISCMCHNTD-GIYSSKQTAVIRASDDYYPRDPAS--------HTIHISSV 285
+ R+F NG I+ M H D + ++ A+ R DD++ DP+ H+
Sbjct: 441 VRRHFNGNGVIASMEHCNDFMLLGTEAVALGRVGDDFWCTDPSGDPDGTFWLQGCHMVHC 500
Query: 286 AYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPD 345
AYN+L++G F+ PDWDMF S HP A +H A+RAV G +YVSD G H+FDLLR+L LPD
Sbjct: 501 AYNSLWMGAFIHPDWDMFQSTHPCAAFHAASRAVSGGPVYVSDAVGCHDFDLLRRLALPD 560
Query: 346 GSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRI 405
G++LR + PTRDCLFADP DG ++LK+WNVNK SGV+G FNCQG GW + ++
Sbjct: 561 GTILRCERYALPTRDCLFADPLHDGKTMLKIWNVNKFSGVLGAFNCQGGGWSREARRNMC 620
Query: 406 HDESPGTLTASVRVTDVENMAQIAGAGWNGDAI-VYAHRSGEVVRLPKGASVPVTLKVLE 464
+TA DVE + G GD VY + ++ L + SV +TL+
Sbjct: 621 AAGFSVPVTARASPADVE----WSHGGGGGDRFAVYFVEARKLQLLRRDESVELTLEPFT 676
Query: 465 YELFHFCPLKEISS---NISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLFDGEVSSELT 521
YEL P++ I S I FA IGL +M N+GGAV+ E DG+V++E+
Sbjct: 677 YELLVVAPVRAIVSPELGIGFAPIGLANMLNAGGAVQGFEAARK-------DGDVAAEVA 729
Query: 522 TSLSDNRSPTATISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLP 578
V+G G YSS RP C V +F Y+ G++T+ +P
Sbjct: 730 ----------------VKGAGEMVAYSSARPRLCKVNGQDAEFKYED--GIVTVDVP 768
>sp|Q9FND9|RFS5_ARATH Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis
thaliana GN=RFS5 PE=1 SV=1
Length = 783
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/599 (36%), Positives = 334/599 (55%), Gaps = 48/599 (8%)
Query: 1 MQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQ 60
M TF E+K P +D FGWCTWDAFY V +GV +G+K L GG PP ++IDDGWQ
Sbjct: 206 MNTFKLLEEKSPPGIVDKFGWCTWDAFYLTVNPDGVHKGVKCLVDGGCPPGLVLIDDGWQ 265
Query: 61 QI---ENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVS-GLKHVVDESKQN 116
I + E I G Q RL +EN KF+ +Q G+K V + K
Sbjct: 266 SIGHDSDGIDVEGMNITVAGEQMPCRLLKFEENHKFKDYVSPKDQNDVGMKAFVRDLKDE 325
Query: 117 HN-VKYVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGL 175
+ V Y+YVWHAL GYWGG++P A + + + P SPG+ D+ +D + G+
Sbjct: 326 FSTVDYIYVWHALCGYWGGLRPEAPALP--PSTIIRPELSPGLKLTMEDLAVDKIIETGI 383
Query: 176 GLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASI 235
G P FY LH++L + G+DGVKVDV +I+E L +GGRV L ++Y +AL +S+
Sbjct: 384 GFASPDLAKEFYEGLHSHLQNAGIDGVKVDVIHILEMLCQKYGGRVDLAKAYFKALTSSV 443
Query: 236 ARNFPDNGCISCMCHNTDGIY-SSKQTAVIRASDDYYPRDPAS--------HTIHISSVA 286
++F NG I+ M H D ++ ++ ++ R DD++ DP+ H+ A
Sbjct: 444 NKHFNGNGVIASMEHCNDFMFLGTEAISLGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCA 503
Query: 287 YNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDG 346
YN+L++G F+QPDWDMF S HP AE+H A+RA+ G IY+SD G H+FDLL++LVLP+G
Sbjct: 504 YNSLWMGNFIQPDWDMFQSTHPCAEFHAASRAISGGPIYISDCVGKHDFDLLKRLVLPNG 563
Query: 347 SVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIH 406
S+LR + PTRD LF DP DG ++LK+WN+NK +GV+G FNCQG GWC+ T++ +
Sbjct: 564 SILRCEYYALPTRDRLFEDPLHDGKTMLKIWNLNKYTGVIGAFNCQGGGWCRETRRNQCF 623
Query: 407 DESPGTLTASVRVTDVE---NMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVL 463
E TLTA+ DVE + I+ A A+ + +S +++ + +TL+
Sbjct: 624 SECVNTLTATTSPKDVEWNSGSSPISIANVEEFAL-FLSQSKKLLLSGLNDDLELTLEPF 682
Query: 464 EYELFHFCPLKEISSN-ISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLFDGEVSSELTT 522
++EL P+ I N + FA IGL++M N+ GA+ ++ V+ E
Sbjct: 683 KFELITVSPVVTIEGNSVRFAPIGLVNMLNTSGAIRSL-VYNDE---------------- 725
Query: 523 SLSDNRSPTATISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPE 581
++ + V G G F +Y+S++P+ C + +F Y+ + ++ + P+
Sbjct: 726 ----------SVEVGVFGAGEFRVYASKKPVSCLIDGEVVEFGYEDSMVMVQVPWSGPD 774
>sp|Q93XK2|STSYN_PEA Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 SV=1
Length = 853
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 217/672 (32%), Positives = 325/672 (48%), Gaps = 122/672 (18%)
Query: 1 MQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGV-------------------DEGLK 41
+ +F E+K +P+ +D FGWCTWDAFY V G+ D+G +
Sbjct: 203 LNSFRLLEEKTIPNLVDKFGWCTWDAFYLTVNPIGIFHGLDDFSKGGVEPRFVIIDDGWQ 262
Query: 42 SLSAGGTPP-------------------------KFLIIDDGWQQIENKPKEESNC---I 73
S+S G P KF + G N P + N +
Sbjct: 263 SISFDGYDPNEDAKNLVLGGEQMSGRLHRFDECYKFRKYESGLLLGPNSPPYDPNNFTDL 322
Query: 74 VQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDE-------------SKQNHNVK 120
+ +G + +L +E + K +E S +K VV E K +
Sbjct: 323 ILKGIE-HEKLRKKREEAISSKSSDLAEIESKIKKVVKEIDDLFGGEQFSSGEKSEMKSE 381
Query: 121 Y------------------VYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQ 162
Y VYVWHAL G WGGV+P H DT + SPG+ G
Sbjct: 382 YGLKAFTKDLRTKFKGLDDVYVWHALCGAWGGVRPET---THLDTKIVPCKLSPGLDGTM 438
Query: 163 PDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVS 222
D+ + ++ LGLVHP + Y+ +H+YLA G+ GVKVDV + +E + +GGRV
Sbjct: 439 EDLAVVEISKASLGLVHPSQANELYDSMHSYLAESGITGVKVDVIHSLEYVCDEYGGRVD 498
Query: 223 LTRSYHQALEASIARNFPDNGCISCMCHNTDGIY-SSKQTAVIRASDDYYPRDPAS---- 277
L + Y++ L SI +NF NG I+ M H D + +KQ ++ R DD++ +DP
Sbjct: 499 LAKVYYEGLTKSIVKNFNGNGMIASMQHCNDFFFLGTKQISMGRVGDDFWFQDPNGDPMG 558
Query: 278 ----HTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNH 333
+H+ +YN+L++G+ +QPDWDMF S H A++H +RA+ G IYVSD G+H
Sbjct: 559 SFWLQGVHMIHCSYNSLWMGQMIQPDWDMFQSDHVCAKFHAGSRAICGGPIYVSDNVGSH 618
Query: 334 NFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQG 393
+FDL++KLV PDG++ + PTRDCLF +P D T++LK+WN NK GV+G FNCQG
Sbjct: 619 DFDLIKKLVFPDGTIPKCIYFPLPTRDCLFKNPLFDHTTVLKIWNFNKYGGVIGAFNCQG 678
Query: 394 AGWCKITKKTRIHDESPGTLTASVRVTDVE--NMAQIAGAGWNGDAIVYAHRSGEVVRLP 451
AGW I +K R E + +V VT+VE + + G + +VY +++ E+ +
Sbjct: 679 AGWDPIMQKFRGFPECYKPIPGTVHVTEVEWDQKEETSHLGKAEEYVVYLNQAEELSLMT 738
Query: 452 -KGASVPVTLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENVEVHMSEKKPD 510
K + T++ +EL+ F P+ ++ I FA IGL +MFNSGG V ++E + K
Sbjct: 739 LKSEPIQFTIQPSTFELYSFVPVTKLCGGIKFAPIGLTNMFNSGGTVIDLEYVGNGAK-- 796
Query: 511 LFDGEVSSELTTSLSDNRSPTATISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSAT 570
+KV+G G F YSS+ P K + + DF +
Sbjct: 797 -------------------------IKVKGGGSFLAYSSESPKKFQLNGCEVDFEW-LGD 830
Query: 571 GLMTMTLPVPEE 582
G + + +P EE
Sbjct: 831 GKLCVNVPWIEE 842
>sp|Q9SYJ4|RFS4_ARATH Probable galactinol--sucrose galactosyltransferase 4 OS=Arabidopsis
thaliana GN=RFS4 PE=2 SV=3
Length = 876
Score = 315 bits (807), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 172/478 (35%), Positives = 267/478 (55%), Gaps = 45/478 (9%)
Query: 122 VYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHPK 181
+YVWHAL G W GV+P + M +A SP + D+ +D + G+GLVHP
Sbjct: 416 IYVWHALCGAWNGVRP--ETMMDLKAKVAPFELSPSLGATMADLAVDKVVEAGIGLVHPS 473
Query: 182 KVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARNFPD 241
K FY+ +H+YLAS GV G K+DV +E+L HGGRV L ++Y+ L S+ +NF
Sbjct: 474 KAHEFYDSMHSYLASVGVTGAKIDVFQTLESLAEEHGGRVELAKAYYDGLTESMIKNFNG 533
Query: 242 NGCISCMCHNTDGIY-SSKQTAVIRASDDYYPRDPAS--------HTIHISSVAYNTLFL 292
I+ M + + ++KQ ++ R DD++ +DP +H+ +YN++++
Sbjct: 534 TDVIASMQQCNEFFFLATKQISIGRVGDDFWWQDPYGDPQGVYWLQGVHMIHCSYNSIWM 593
Query: 293 GEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPG--NHNFDLLRKLVLPDGSVLR 350
G+ +QPDWDMF S H AEYH A+RA+ G +Y+SD G +HNFDL++KL DG++ R
Sbjct: 594 GQMIQPDWDMFQSDHVCAEYHAASRAICGGPVYLSDHLGKASHNFDLIKKLAFFDGTIPR 653
Query: 351 AQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESP 410
PTRD LF +P D S+LK++N NK GV+G FNCQGAGW + + + E
Sbjct: 654 CVHYALPTRDSLFKNPLFDKESILKIFNFNKFGGVIGTFNCQGAGWSPEEHRFKGYKECY 713
Query: 411 GTLTASVRVTDVENMAQIAGAG----WNGDAIVYAHRSGEVVRL-PKGASVPVTLKVLEY 465
T++ +V V+D+E AG + GD +VY +S E++ + K ++ +TL+ +
Sbjct: 714 TTVSGTVHVSDIEWDQNPEAAGSQVTYTGDYLVYKQQSEEILFMNSKSEAMKITLEPSAF 773
Query: 466 ELFHFCPLKE-ISSNISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLFDGEVSSELTTSL 524
+L F P+ E +SS + FA +GL++MFN G V++++V
Sbjct: 774 DLLSFVPVTELVSSGVRFAPLGLINMFNCVGTVQDMKV---------------------T 812
Query: 525 SDNRSPTATISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEE 582
DN +I + V+G GRF YSS P+KC + + +F ++ TG ++ +P EE
Sbjct: 813 GDN-----SIRVDVKGEGRFMAYSSSAPVKCYLNDKEAEFKWEEETGKLSFFVPWVEE 865
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 1 MQTFTHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQ 60
M TF E+KKLP +D FGWCTWDA Y V + G+K GG PKF+IIDDGWQ
Sbjct: 217 MNTFKLLEEKKLPKIVDKFGWCTWDACYLTVDPATIWTGVKEFEDGGVCPKFVIIDDGWQ 276
Query: 61 QIE---NKPKEESNCIVQEGAQFASRLTGIKENSKFQ 94
I ++ +++ +V G Q +RLT KE KF+
Sbjct: 277 SINFDGDELDKDAENLVLGGEQMTARLTSFKECKKFR 313
>sp|Q97U94|AGAL_SULSO Alpha-galactosidase OS=Sulfolobus solfataricus (strain ATCC 35092 /
DSM 1617 / JCM 11322 / P2) GN=galS PE=1 SV=2
Length = 648
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 176/411 (42%), Gaps = 90/411 (21%)
Query: 3 TFTHREKKKLP-SFLDWFGWCTWDAFYT-DVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQ 60
TF R++K P ++ GWC+W+AF T D+ E + + +K + G ++IIDDGWQ
Sbjct: 207 TFKLRKEKGFPDKVMNGLGWCSWNAFLTKDLNEENLIKVVKGIIERGLRLNWVIIDDGWQ 266
Query: 61 QIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNVK 120
Q + L +N KF +N+ V +K + VK
Sbjct: 267 D-------------QNNDRAIRSLN--PDNKKFPNGFKNT--VRAIKSL--------GVK 301
Query: 121 YVYVWHALAGYWGGVKPAADGMEHYDTALAYPVTSPGVMGNQPDIVMDSLAVHGLGLVHP 180
YV +WHA+ +WGG+ +M SL V+G
Sbjct: 302 YVGLWHAINAHWGGMSQE---------------------------LMKSLNVNGY----- 329
Query: 181 KKVFNFYNELHAYLASCGV------------------DGVKVDVQNIIETLGAGHGGRVS 222
F N L++Y+ S + D VKVD Q +I + ++
Sbjct: 330 -----FTNFLNSYVPSPNLEDAIGFYKAFDGNILRDFDLVKVDNQWVIHAIYDSFPIGLA 384
Query: 223 LTRSYHQALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHI 282
+R+ AL+ S+ ++ I+CM N + + + V+R S DY P +HI
Sbjct: 385 -SRNIQIALQYSVGKD-----VINCMSMNPENYCNYFYSNVMRNSIDYVPFWKDGTKLHI 438
Query: 283 SSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDK-PGNHNFDLLRKL 341
AYN+L + PD+DMF S P A+ H AR G IY++D+ P N +LLR
Sbjct: 439 MFNAYNSLLTSHIVYPDYDMFMSYDPYAKVHLVARVFSGGPIYITDRHPERTNIELLRMA 498
Query: 342 VLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQ 392
VLP+G V+R P T D LF DP R+ LLK+ K + FN
Sbjct: 499 VLPNGEVIRVDEPALITEDLLFKDPLRERV-LLKLKGKVKGYNAIAFFNLN 548
>sp|Q2Y6Y6|HIS82_NITMU Histidinol-phosphate aminotransferase 2 OS=Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849) GN=hisC2 PE=3 SV=1
Length = 392
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%)
Query: 295 FMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLP 354
F++P +S H A Y +AVGG I V + H+ D + V P+ V+ P
Sbjct: 107 FLKPGASTVYSQHAFAVYPLVTKAVGGIGISVPARNYGHDLDAMLDAVAPETRVVFIANP 166
Query: 355 GRPTRDCLFAD 365
PT L AD
Sbjct: 167 NNPTGTLLPAD 177
>sp|Q9SJK6|WBC30_ARATH Putative white-brown complex homolog protein 30 OS=Arabidopsis
thaliana GN=WBC30 PE=3 SV=3
Length = 1082
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 79/206 (38%), Gaps = 39/206 (18%)
Query: 172 VHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYH--- 228
VHG V F+ L AY++ D V + ++ +IE+LG H R SL +
Sbjct: 569 VHGNLTVEENLRFSARCRLSAYMSK--ADKVLI-IERVIESLGLQHV-RDSLVGTIEKRG 624
Query: 229 ----QALEASIARNFPDNGCISCMCHNTDGIYSSKQTAVIRASDDYYPRDPASHTIHISS 284
Q ++ + + T G+ S+ ++RA R A ++I
Sbjct: 625 ISGGQRKRVNVGVEMVMEPSLLILDEPTTGLDSASSQLLLRAL-----RREALEGVNICM 679
Query: 285 VAYNTLFLGEFMQPDWDMFHSLHPA--------AEYHGAARAV----GGCAIYVSDK--P 330
V + QP + M+ YHG+ + + I V D+ P
Sbjct: 680 VVH---------QPSYTMYKMFDDMIILAKGGLTVYHGSVKKIEEYFADIGITVPDRVNP 730
Query: 331 GNHNFDLLRKLVLPDGSVLRAQLPGR 356
+H D+L +V PDG + QLP R
Sbjct: 731 PDHYIDILEGIVKPDGDITIEQLPVR 756
>sp|Q06806|TIE1_MOUSE Tyrosine-protein kinase receptor Tie-1 OS=Mus musculus GN=Tie1 PE=2
SV=3
Length = 1134
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 341 LVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKIT 400
L+ D ++R PG+P L+ AR+G+ + + +K S +VGVF+C G + T
Sbjct: 59 LLEKDDRIVRTFPPGQP----LYL--ARNGSHQVTLRGFSKPSDLVGVFSCVGGAGARRT 112
Query: 401 KKTRIHDESPGTLTASVRVTDVENMAQIA 429
+ +H+ SPG +VT N A
Sbjct: 113 RVLYVHN-SPGAHLFPDKVTHTVNKGDTA 140
>sp|Q22639|VPS54_CAEEL Vacuolar protein sorting-associated protein 54 OS=Caenorhabditis
elegans GN=vps-54 PE=1 SV=2
Length = 1058
Score = 33.9 bits (76), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 17/112 (15%)
Query: 445 GEVVRLPKGASVPVTLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENVEVHM 504
GE VR K A T+K + E F+FC E +I + + + G+ E++ V
Sbjct: 538 GEPVRRMKHADFLKTVKAVMDEEFYFCKRLEALQDILLETVERANPLHRHGS-EDIIVER 596
Query: 505 SEKKPDLFDGEVSSELTTS----------------LSDNRSPTATISLKVRG 540
E+ D+ + E E+ T+ LS N S T +S++VR
Sbjct: 597 IEEAKDIHESESDDEVGTTFSKSASSGGFSVGGSALSSNASATTLLSIEVRS 648
>sp|P35590|TIE1_HUMAN Tyrosine-protein kinase receptor Tie-1 OS=Homo sapiens GN=TIE1 PE=1
SV=1
Length = 1138
Score = 33.5 bits (75), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 341 LVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKIT 400
L+ D ++R PG P R AR+G+ + + +K S +VGVF+C G + T
Sbjct: 62 LLEKDDRIVRTP-PGPPLRL------ARNGSHQVTLRGFSKPSDLVGVFSCVGGAGARRT 114
Query: 401 KKTRIHDESPGTLTASVRVTDVENMAQIA 429
+ +H+ SPG +VT N A
Sbjct: 115 RVIYVHN-SPGAHLLPDKVTHTVNKGDTA 142
>sp|Q8Y0Y8|HIS82_RALSO Histidinol-phosphate aminotransferase 2 OS=Ralstonia solanacearum
(strain GMI1000) GN=hisC2 PE=3 SV=1
Length = 374
Score = 33.5 bits (75), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 295 FMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLP 354
+ P + ++ H A Y AA+ VG A+ V + H+ D + + PD ++ P
Sbjct: 106 LVAPGQGVIYAQHAFAVYALAAQEVGARAVEVPARDYGHDLDAMAAAITPDTRLIYVANP 165
Query: 355 GRPTRDCLFAD 365
PT L AD
Sbjct: 166 NNPTGTFLPAD 176
>sp|B1LQI4|RSGA_ECOSM Putative ribosome biogenesis GTPase RsgA OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=rsgA PE=3 SV=1
Length = 350
Score = 32.7 bits (73), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 166 VMDSLAVHGLGLVH--PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSL 223
V+DS V GL H P+++ + E H YL C K D A G+++
Sbjct: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323
Query: 224 TR--SYHQALEA----SIARNFPD 241
TR +YH+ LE+ +NF D
Sbjct: 324 TRFENYHRILESMAQVKTRKNFSD 347
>sp|P39286|RSGA_ECOLI Putative ribosome biogenesis GTPase RsgA OS=Escherichia coli
(strain K12) GN=rsgA PE=1 SV=2
Length = 350
Score = 32.7 bits (73), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 166 VMDSLAVHGLGLVH--PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSL 223
V+DS V GL H P+++ + E H YL C K D A G+++
Sbjct: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323
Query: 224 TR--SYHQALEA----SIARNFPD 241
TR +YH+ LE+ +NF D
Sbjct: 324 TRFENYHRILESMAQVKTRKNFSD 347
>sp|B1IT42|RSGA_ECOLC Putative ribosome biogenesis GTPase RsgA OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=rsgA PE=3 SV=1
Length = 350
Score = 32.7 bits (73), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 166 VMDSLAVHGLGLVH--PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSL 223
V+DS V GL H P+++ + E H YL C K D A G+++
Sbjct: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323
Query: 224 TR--SYHQALEA----SIARNFPD 241
TR +YH+ LE+ +NF D
Sbjct: 324 TRFENYHRILESMAQVKTRKNFSD 347
>sp|B1XDR5|RSGA_ECODH Putative ribosome biogenesis GTPase RsgA OS=Escherichia coli
(strain K12 / DH10B) GN=rsgA PE=3 SV=1
Length = 350
Score = 32.7 bits (73), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 166 VMDSLAVHGLGLVH--PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSL 223
V+DS V GL H P+++ + E H YL C K D A G+++
Sbjct: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323
Query: 224 TR--SYHQALEA----SIARNFPD 241
TR +YH+ LE+ +NF D
Sbjct: 324 TRFENYHRILESMAQVKTRKNFSD 347
>sp|C5A1F5|RSGA_ECOBW Putative ribosome biogenesis GTPase RsgA OS=Escherichia coli
(strain K12 / MC4100 / BW2952) GN=rsgA PE=3 SV=1
Length = 350
Score = 32.7 bits (73), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 166 VMDSLAVHGLGLVH--PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSL 223
V+DS V GL H P+++ + E H YL C K D A G+++
Sbjct: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323
Query: 224 TR--SYHQALEA----SIARNFPD 241
TR +YH+ LE+ +NF D
Sbjct: 324 TRFENYHRILESMAQVKTRKNFSD 347
>sp|B7NG98|RSGA_ECOLU Putative ribosome biogenesis GTPase RsgA OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=rsgA PE=3 SV=1
Length = 350
Score = 32.7 bits (73), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 166 VMDSLAVHGLGLVH--PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSL 223
V+DS V GL H P+++ + E H YL C K D A G+++
Sbjct: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323
Query: 224 TR--SYHQALEA----SIARNFPD 241
TR +YH+ LE+ +NF D
Sbjct: 324 TRFENYHRILESMAQVKTRKNFSD 347
>sp|Q8FAL3|RSGA_ECOL6 Putative ribosome biogenesis GTPase RsgA OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=rsgA PE=3 SV=2
Length = 350
Score = 32.7 bits (73), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 166 VMDSLAVHGLGLVH--PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSL 223
V+DS V GL H P+++ + E H YL C K D A G+++
Sbjct: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323
Query: 224 TR--SYHQALEA----SIARNFPD 241
TR +YH+ LE+ +NF D
Sbjct: 324 TRFENYHRILESMAQVKTRKNFSD 347
>sp|B7MSX6|RSGA_ECO81 Putative ribosome biogenesis GTPase RsgA OS=Escherichia coli O81
(strain ED1a) GN=rsgA PE=3 SV=1
Length = 350
Score = 32.7 bits (73), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 166 VMDSLAVHGLGLVH--PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSL 223
V+DS V GL H P+++ + E H YL C K D A G+++
Sbjct: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323
Query: 224 TR--SYHQALEA----SIARNFPD 241
TR +YH+ LE+ +NF D
Sbjct: 324 TRFENYHRILESMAQVKTRKNFSD 347
>sp|B7NTM0|RSGA_ECO7I Putative ribosome biogenesis GTPase RsgA OS=Escherichia coli O7:K1
(strain IAI39 / ExPEC) GN=rsgA PE=3 SV=1
Length = 350
Score = 32.7 bits (73), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 166 VMDSLAVHGLGLVH--PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSL 223
V+DS V GL H P+++ + E H YL C K D A G+++
Sbjct: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323
Query: 224 TR--SYHQALEA----SIARNFPD 241
TR +YH+ LE+ +NF D
Sbjct: 324 TRFENYHRILESMAQVKTRKNFSD 347
>sp|B7MKW8|RSGA_ECO45 Putative ribosome biogenesis GTPase RsgA OS=Escherichia coli O45:K1
(strain S88 / ExPEC) GN=rsgA PE=3 SV=1
Length = 350
Score = 32.7 bits (73), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 166 VMDSLAVHGLGLVH--PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSL 223
V+DS V GL H P+++ + E H YL C K D A G+++
Sbjct: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323
Query: 224 TR--SYHQALEA----SIARNFPD 241
TR +YH+ LE+ +NF D
Sbjct: 324 TRFENYHRILESMAQVKTRKNFSD 347
>sp|B7UPY1|RSGA_ECO27 Putative ribosome biogenesis GTPase RsgA OS=Escherichia coli
O127:H6 (strain E2348/69 / EPEC) GN=rsgA PE=3 SV=1
Length = 350
Score = 32.7 bits (73), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 166 VMDSLAVHGLGLVH--PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSL 223
V+DS V GL H P+++ + E H YL C K D A G+++
Sbjct: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323
Query: 224 TR--SYHQALEA----SIARNFPD 241
TR +YH+ LE+ +NF D
Sbjct: 324 TRFENYHRILESMAQVKTRKNFSD 347
>sp|B2TY39|RSGA_SHIB3 Putative ribosome biogenesis GTPase RsgA OS=Shigella boydii
serotype 18 (strain CDC 3083-94 / BS512) GN=rsgA PE=3
SV=1
Length = 350
Score = 32.7 bits (73), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 166 VMDSLAVHGLGLVH--PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSL 223
V+DS V GL H P+++ + E H YL C K D A G+++
Sbjct: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323
Query: 224 TR--SYHQALEA----SIARNFPD 241
TR +YH+ LE+ +NF D
Sbjct: 324 TRFENYHRILESMAQVKTRKNFSD 347
>sp|B6I268|RSGA_ECOSE Putative ribosome biogenesis GTPase RsgA OS=Escherichia coli
(strain SE11) GN=rsgA PE=3 SV=1
Length = 350
Score = 32.7 bits (73), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 166 VMDSLAVHGLGLVH--PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSL 223
V+DS V GL H P+++ + E H YL C K D A G+++
Sbjct: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323
Query: 224 TR--SYHQALEA----SIARNFPD 241
TR +YH+ LE+ +NF D
Sbjct: 324 TRFENYHRILESMAQVKTRKNFSD 347
>sp|A8A7Q8|RSGA_ECOHS Putative ribosome biogenesis GTPase RsgA OS=Escherichia coli O9:H4
(strain HS) GN=rsgA PE=3 SV=1
Length = 350
Score = 32.7 bits (73), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 166 VMDSLAVHGLGLVH--PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSL 223
V+DS V GL H P+++ + E H YL C K D A G+++
Sbjct: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323
Query: 224 TR--SYHQALEA----SIARNFPD 241
TR +YH+ LE+ +NF D
Sbjct: 324 TRFENYHRILESMAQVKTRKNFSD 347
>sp|B5Z2H0|RSGA_ECO5E Putative ribosome biogenesis GTPase RsgA OS=Escherichia coli
O157:H7 (strain EC4115 / EHEC) GN=rsgA PE=3 SV=1
Length = 350
Score = 32.7 bits (73), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 166 VMDSLAVHGLGLVH--PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSL 223
V+DS V GL H P+++ + E H YL C K D A G+++
Sbjct: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323
Query: 224 TR--SYHQALEA----SIARNFPD 241
TR +YH+ LE+ +NF D
Sbjct: 324 TRFENYHRILESMAQVKTRKNFSD 347
>sp|Q8XDP1|RSGA_ECO57 Putative ribosome biogenesis GTPase RsgA OS=Escherichia coli
O157:H7 GN=rsgA PE=3 SV=2
Length = 350
Score = 32.7 bits (73), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 166 VMDSLAVHGLGLVH--PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSL 223
V+DS V GL H P+++ + E H YL C K D A G+++
Sbjct: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323
Query: 224 TR--SYHQALEA----SIARNFPD 241
TR +YH+ LE+ +NF D
Sbjct: 324 TRFENYHRILESMAQVKTRKNFSD 347
>sp|B7LC22|RSGA_ECO55 Putative ribosome biogenesis GTPase RsgA OS=Escherichia coli
(strain 55989 / EAEC) GN=rsgA PE=3 SV=1
Length = 350
Score = 32.7 bits (73), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 166 VMDSLAVHGLGLVH--PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSL 223
V+DS V GL H P+++ + E H YL C K D A G+++
Sbjct: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323
Query: 224 TR--SYHQALEA----SIARNFPD 241
TR +YH+ LE+ +NF D
Sbjct: 324 TRFENYHRILESMAQVKTRKNFSD 347
>sp|A7ZV32|RSGA_ECO24 Putative ribosome biogenesis GTPase RsgA OS=Escherichia coli
O139:H28 (strain E24377A / ETEC) GN=rsgA PE=3 SV=1
Length = 350
Score = 32.7 bits (73), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 166 VMDSLAVHGLGLVH--PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSL 223
V+DS V GL H P+++ + E H YL C K D A G+++
Sbjct: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323
Query: 224 TR--SYHQALEA----SIARNFPD 241
TR +YH+ LE+ +NF D
Sbjct: 324 TRFENYHRILESMAQVKTRKNFSD 347
>sp|B7M8S4|RSGA_ECO8A Putative ribosome biogenesis GTPase RsgA OS=Escherichia coli O8
(strain IAI1) GN=rsgA PE=3 SV=1
Length = 350
Score = 32.7 bits (73), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 166 VMDSLAVHGLGLVH--PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSL 223
V+DS V GL H P+++ + E H YL C K D A G+++
Sbjct: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIQEAVEEGKIAE 323
Query: 224 TR--SYHQALEA----SIARNFPD 241
TR +YH+ LE+ +NF D
Sbjct: 324 TRFENYHRILESMAQVKTRKNFSD 347
>sp|Q83IK0|RSGA_SHIFL Putative ribosome biogenesis GTPase RsgA OS=Shigella flexneri
GN=rsgA PE=3 SV=2
Length = 350
Score = 32.7 bits (73), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 166 VMDSLAVHGLGLVH--PKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSL 223
V+DS V GL H P+++ + E H YL C K D A G+++
Sbjct: 264 VIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAE 323
Query: 224 TR--SYHQALEA----SIARNFPD 241
TR +YH+ LE+ +NF D
Sbjct: 324 TRFENYHRILESMAQVKTRKNFSD 347
>sp|Q7A0H5|FTN_STAAW Ferritin OS=Staphylococcus aureus (strain MW2) GN=ftnA PE=3 SV=1
Length = 166
Score = 32.7 bits (73), Expect = 9.3, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 179 HPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARN 238
H +K++N+ N+ A+ V K+D +I+ET +TR ++ E IAR
Sbjct: 53 HGQKIYNYINDRGAHAEFRAVSAPKIDFSSILETFKDSLSQEQEVTRRFYNLSE--IARQ 110
Query: 239 FPDNGCIS 246
D IS
Sbjct: 111 DKDYATIS 118
>sp|Q6G840|FTN_STAAS Ferritin OS=Staphylococcus aureus (strain MSSA476) GN=ftnA PE=3
SV=1
Length = 166
Score = 32.7 bits (73), Expect = 9.3, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 179 HPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARN 238
H +K++N+ N+ A+ V K+D +I+ET +TR ++ E IAR
Sbjct: 53 HGQKIYNYINDRGAHAEFRAVSAPKIDFSSILETFKDSLSQEQEVTRRFYNLSE--IARQ 110
Query: 239 FPDNGCIS 246
D IS
Sbjct: 111 DKDYATIS 118
>sp|Q6GFG4|FTN_STAAR Ferritin OS=Staphylococcus aureus (strain MRSA252) GN=ftnA PE=3
SV=1
Length = 166
Score = 32.7 bits (73), Expect = 9.3, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 179 HPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARN 238
H +K++N+ N+ A+ V K+D +I+ET +TR ++ E IAR
Sbjct: 53 HGQKIYNYINDRGAHAEFRAVSAPKIDFSSILETFKDSLSQEQEVTRRFYNLSE--IARQ 110
Query: 239 FPDNGCIS 246
D IS
Sbjct: 111 DKDYATIS 118
>sp|Q7A4R2|FTN_STAAN Ferritin OS=Staphylococcus aureus (strain N315) GN=ftnA PE=1 SV=1
Length = 166
Score = 32.7 bits (73), Expect = 9.3, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 179 HPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARN 238
H +K++N+ N+ A+ V K+D +I+ET +TR ++ E IAR
Sbjct: 53 HGQKIYNYINDRGAHAEFRAVSAPKIDFSSILETFKDSLSQEQEVTRRFYNLSE--IARQ 110
Query: 239 FPDNGCIS 246
D IS
Sbjct: 111 DKDYATIS 118
>sp|Q99SZ3|FTN_STAAM Ferritin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=ftnA PE=1 SV=1
Length = 166
Score = 32.7 bits (73), Expect = 9.3, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 179 HPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARN 238
H +K++N+ N+ A+ V K+D +I+ET +TR ++ E IAR
Sbjct: 53 HGQKIYNYINDRGAHAEFRAVSAPKIDFSSILETFKDSLSQEQEVTRRFYNLSE--IARQ 110
Query: 239 FPDNGCIS 246
D IS
Sbjct: 111 DKDYATIS 118
>sp|Q5HEN0|FTN_STAAC Ferritin OS=Staphylococcus aureus (strain COL) GN=ftnA PE=3 SV=1
Length = 166
Score = 32.7 bits (73), Expect = 9.3, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 179 HPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARN 238
H +K++N+ N+ A+ V K+D +I+ET +TR ++ E IAR
Sbjct: 53 HGQKIYNYINDRGAHAEFRAVSAPKIDFSSILETFKDSLSQEQEVTRRFYNLSE--IARQ 110
Query: 239 FPDNGCIS 246
D IS
Sbjct: 111 DKDYATIS 118
>sp|Q2YU34|FTN_STAAB Ferritin OS=Staphylococcus aureus (strain bovine RF122 / ET3-1)
GN=ftnA PE=3 SV=1
Length = 166
Score = 32.7 bits (73), Expect = 9.3, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 179 HPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARN 238
H +K++N+ N+ A+ V K+D +I+ET +TR ++ E IAR
Sbjct: 53 HGQKIYNYINDRGAHAEFRAVSAPKIDFSSILETFKDSLSQEQEVTRRFYNLSE--IARQ 110
Query: 239 FPDNGCIS 246
D IS
Sbjct: 111 DKDYATIS 118
>sp|Q2FWZ8|FTN_STAA8 Ferritin OS=Staphylococcus aureus (strain NCTC 8325) GN=ftnA PE=1
SV=1
Length = 166
Score = 32.7 bits (73), Expect = 9.3, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 179 HPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARN 238
H +K++N+ N+ A+ V K+D +I+ET +TR ++ E IAR
Sbjct: 53 HGQKIYNYINDRGAHAEFRAVSAPKIDFSSILETFKDSLSQEQEVTRRFYNLSE--IARQ 110
Query: 239 FPDNGCIS 246
D IS
Sbjct: 111 DKDYATIS 118
>sp|Q2FFK2|FTN_STAA3 Ferritin OS=Staphylococcus aureus (strain USA300) GN=ftnA PE=3 SV=1
Length = 166
Score = 32.7 bits (73), Expect = 9.3, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 179 HPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASIARN 238
H +K++N+ N+ A+ V K+D +I+ET +TR ++ E IAR
Sbjct: 53 HGQKIYNYINDRGAHAEFRAVSAPKIDFSSILETFKDSLSQEQEVTRRFYNLSE--IARQ 110
Query: 239 FPDNGCIS 246
D IS
Sbjct: 111 DKDYATIS 118
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 233,472,945
Number of Sequences: 539616
Number of extensions: 10116172
Number of successful extensions: 22374
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 22317
Number of HSP's gapped (non-prelim): 60
length of query: 593
length of database: 191,569,459
effective HSP length: 123
effective length of query: 470
effective length of database: 125,196,691
effective search space: 58842444770
effective search space used: 58842444770
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)