Query 007688
Match_columns 593
No_of_seqs 278 out of 594
Neff 4.8
Searched_HMMs 46136
Date Thu Mar 28 14:00:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007688.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007688hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02264 lipoxygenase 100.0 3E-172 5E-177 1440.6 41.7 576 1-593 1-579 (919)
2 PLN02305 lipoxygenase 100.0 1E-164 3E-169 1378.1 43.4 497 95-593 80-577 (918)
3 PLN02337 lipoxygenase 100.0 1E-160 2E-165 1350.0 42.1 494 98-593 20-523 (866)
4 PF00305 Lipoxygenase: Lipoxyg 100.0 1E-108 2E-113 923.4 14.5 341 245-593 1-343 (667)
5 cd01751 PLAT_LH2 PLAT/ LH2 dom 100.0 2.7E-44 5.9E-49 333.7 14.8 135 98-236 2-137 (137)
6 smart00308 LH2 Lipoxygenase ho 99.3 1.6E-11 3.5E-16 107.9 10.2 84 131-224 20-105 (105)
7 PF01477 PLAT: PLAT/LH2 domain 98.9 6.2E-09 1.3E-13 91.6 8.1 64 171-234 46-113 (113)
8 cd00113 PLAT PLAT (Polycystin- 98.7 8.1E-08 1.8E-12 85.8 10.9 64 171-234 49-116 (116)
9 cd02899 PLAT_SR Scavenger rece 98.1 9.9E-06 2.2E-10 73.5 8.8 78 131-223 20-98 (109)
10 cd01756 PLAT_repeat PLAT/LH2 d 97.7 0.0003 6.5E-09 64.1 10.7 93 131-234 20-118 (120)
11 cd01753 PLAT_LOX PLAT domain o 97.7 0.00019 4.1E-09 65.2 8.7 85 131-226 20-107 (113)
12 cd01752 PLAT_polycystin PLAT/L 97.4 0.0011 2.3E-08 60.6 9.3 93 131-233 20-117 (120)
13 cd01757 PLAT_RAB6IP1 PLAT/LH2 97.1 0.0013 2.9E-08 60.2 7.4 47 180-226 50-100 (114)
14 cd01754 PLAT_plant_stress PLAT 96.6 0.0056 1.2E-07 57.3 6.8 54 171-226 59-119 (129)
15 PF03802 CitX: Apo-citrate lya 48.2 10 0.00022 37.2 1.6 49 244-309 89-137 (170)
16 TIGR03124 ctirate_citX holo-AC 43.2 11 0.00024 36.9 1.0 50 242-308 85-134 (165)
17 PF11248 DUF3046: Protein of u 31.3 21 0.00046 29.9 0.7 23 475-497 21-43 (63)
18 cd01755 PLAT_lipase PLAT/ LH2 31.0 2.3E+02 0.005 26.0 7.5 50 170-219 46-105 (120)
19 KOG2080 Uncharacterized conser 28.3 27 0.00058 42.2 1.1 54 172-226 1013-1070(1295)
20 PRK01392 citX 2'-(5''-triphosp 23.5 40 0.00087 33.6 1.2 56 239-308 88-143 (180)
21 cd01759 PLAT_PL PLAT/LH2 domai 22.0 4.7E+02 0.01 24.1 7.8 49 171-219 45-99 (113)
No 1
>PLN02264 lipoxygenase
Probab=100.00 E-value=2.5e-172 Score=1440.59 Aligned_cols=576 Identities=75% Similarity=1.198 Sum_probs=529.9
Q ss_pred CchhhhhcccccccccCCCcccccchhcccchhhccccccccccccccccccccccccccccccccccCCccccccccee
Q 007688 1 MALTREFMGAFSIFERSSSSSSSSKVLLNQSTFWQNKLLQQKQFLVPVQQRRVHSRKAGAAGVRRGINNPVAALSEDLVK 80 (593)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (593)
||+++||||-+-.++.++| .+++++|+++...+++||. .+|+. ..+-+|.++ ..||+++++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~-------~~~~~~~~~~~~~ 65 (919)
T PLN02264 1 MALAKEIMGGRLIFERSSF-VSSSKHFRNSKRTQRTQFS-INPFR------QEQLRRVVK-------SGVVAAISEDLVK 65 (919)
T ss_pred CchhhhhhcceeeccCccc-ccchHHHhhcccchhceec-ccccc------HHHHHHHhc-------cCCeeeehHHHHH
Confidence 9999999994444499999 9999999998889889994 57874 111122212 3367999999888
Q ss_pred eccccc---ccCCCCCCceeEEEEEEEEEecccccccccccchhhhhhhhcCCcEEEEEeecccCCCCCCCccccccccc
Q 007688 81 GAASSA---VPGAAEKPVKFKVRAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLK 157 (593)
Q Consensus 81 ~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~d~~~g~gk~~~~~~l~ 157 (593)
+...++ +..-.+|...++|||+|+||+|++++++++.++++|+++|++||+|+|||||+++||+||+||+|++++|+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~i~~~v~~~~~~~~~~~~~~~~~~D~~~~~~G~~v~lqLVSs~~~~~tg~~~~~~~a~l~ 145 (919)
T PLN02264 66 TLRVSTVRKSEEEEEKAVKFKVRAVVTVRNKNKEDLKETLVKHLDAFTDKIGRNVVLELISTQVDPKTKEPKKSKAAVLK 145 (919)
T ss_pred hhccccccccccCcccceEEEEEEEEEEEeccccchhhcccchhhHHHHHhCCeEEEEEEeccccCCCCCccCCCcchhc
Confidence 775321 11224554668999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcCcceeEEEEEEEecCCCCCceEEEEEecCCCceeeeeeEEeecCCceEEEEecccccCCCCCCCcceeeccc
Q 007688 158 DWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQ 237 (593)
Q Consensus 158 ~w~~~~~~~~~~~~y~~~F~v~~~fG~pGAi~v~n~h~~e~fl~~i~l~~~~~~~i~F~CnSWV~~~~~~~~~RiFF~nk 237 (593)
+|++++.+.+++++|+|+|+||++||+||||+|+|+|++||||++|+|+++|+|+|||+|||||||+++|+++||||+||
T Consensus 146 ~~~~~~~~~~~~~~y~~~F~~~~~fG~pGAi~V~N~h~~EffL~~itle~~p~g~v~F~cnSWV~p~~~~~~~RiFF~Nk 225 (919)
T PLN02264 146 DWSKKSNIKAERVHYTAEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPGKRIFFTNQ 225 (919)
T ss_pred ccccCCCCCCCceEEEEEEEeccccCCcceEEEEeCCCceEEEEEEEeccCCCCcEEEecCCccccCcCCCCCceEecCC
Confidence 99976665788889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcCCCcHHhHHHHHHHHHhhhCCCCCccccCCeeeecccccCCCCCCCCCCCccccCCCCCCCCCCccCCCCCCCCCC
Q 007688 238 PYLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGEQRPYPRRCRTGRLPTDTD 317 (593)
Q Consensus 238 ~yLP~~tP~~L~~~Re~EL~~lRGdG~Gerk~~DRIYdydvYNDLG~Pd~~~~~~RPvLGGs~~PYPRR~RTGR~p~~~D 317 (593)
+|||++||++|++|||+||++|||||+||||+||||||||||||||+||++++++||||||++|||||||||||+||+||
T Consensus 226 ~YLP~~tP~~l~~~Re~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~~PYPRR~RTGR~~t~~d 305 (919)
T PLN02264 226 PYLPSETPAGLRALREKELRNLRGDGKGVRKLSDRIYDFDVYNDLGNPDKSRELARPTLGGKKIPYPRRCRTGRLPTDSD 305 (919)
T ss_pred CcCcccCCHHHHHHHHHHHHHhcCCCCCcCCcccchhhhhhhccCCCCCCCccccCcccCCCCCCCCCCCcCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCcccCCCCCCchhhhhhhhhchhhhhhhhhhHHHHHhhhcCCCCCCCHHhHHHHHhccccccccccccc
Q 007688 318 LLAESRIEKPLPIYVPRDEQFEESKQDAFSAGRLKGALHNLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGL 397 (593)
Q Consensus 318 p~sEsr~~~~~~~yvPrDE~Fs~~K~~dF~~~~lka~~~~~ip~l~~~~~~~~~~F~sf~Di~~LY~~g~~lp~~~~~~~ 397 (593)
|++|||.+.+..|||||||+|+++|++||++++|||++|.++|+|+++++.+ +|+||+||++||++|+++|..+.+..
T Consensus 306 p~~Esr~~~~~~iYvPrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~--~F~~f~~i~~Ly~~g~~l~~~~~~~~ 383 (919)
T PLN02264 306 MMAESRVEKPLPMYVPRDEQFEESKQDTFAAGRLKAVLHNLIPSLKASILAE--DFANFGEIDSLYKEGLLLKLGFQDDI 383 (919)
T ss_pred CcccccccCCCceeCCCCCCcccchhhhHHHHHHHHHHHHhhhhhhhhcCCC--CCCCHHHHHHHHhcCCcCCcchhhhH
Confidence 9999998766678999999999999999999999999999999999998865 99999999999999999996323333
Q ss_pred cccCCchhhhhhhhcccccccccCCccccccccccccccHHHHHHHhhCCCccceeecccCCCCCCCCCCccCCCCcccc
Q 007688 398 LKKLPLPNVVSKIQESSQGLLKYNSPKILSRDKFAWLRDDEFARQALAGVNPVSIERLQAFPPVSNLDPKIYGPQESALK 477 (593)
Q Consensus 398 ~~~~p~~~~~~~~~~~~~~~lkfp~P~vi~~d~~~W~~DeeFarQ~LaGvNP~~I~rlte~P~~s~Ldp~~YG~~~s~IT 477 (593)
.+.+|+|++++++.++++.+||||+|+||++|+++|++|+|||||+|||+||++|++|++||++|+|||+.||+++|+||
T Consensus 384 ~~~~p~~~~~~~~~~~~~~~lkf~~P~vi~~d~~~W~~DeeFarQ~LaGvNP~~I~rl~e~P~~s~ld~~~yg~~~s~it 463 (919)
T PLN02264 384 FKKFPLPKVVTTLQESSEGLLKYDTPKILSKDKFAWLRDDEFARQAIAGINPVNIERVKVFPPVSNLDPEIYGPQHSALT 463 (919)
T ss_pred hhcCChHHHHHHhhhcccccccCCCCceeecChhhccCHHHHHHHHHcCCCchhhhhhhhcCCCCCCCHhhcCCccchhh
Confidence 44489989999998888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCcHHHHHhcCCEEEeecCccccccccccccCCCcceecceeEEEeCCCCceeeEEEEecCCCCCCCCCCc
Q 007688 478 EEHIIGQLDGMSVQQALEENKLYVLDFHDIYLPFLDRINALDGRKSYATRTIFFLNSLGTLKPIAIELSLPPSGPSPRSK 557 (593)
Q Consensus 478 ~e~ie~~l~G~TleeAl~~grLFIlDY~D~~lp~l~~in~~~g~~~YAprtLffl~~dG~L~PlAIqLs~pp~~~~~~~~ 557 (593)
++||+++|+|+||+|||++|||||+||||++|||+++||.++++++|||+||||++++|+|+||||||++++++++++++
T Consensus 464 ~e~v~~~L~G~Tl~eAl~~~rLFilDy~d~~lp~l~~in~~~g~~~YAprtLFfL~~dG~L~PlAIqL~~p~~~~~~~~~ 543 (919)
T PLN02264 464 EDHIIGHLDGLSVQQALEENRLFMVDYHDIYLPFLDRINALDGRKAYATRTIFFLTRLGTLKPIAIELSLPPSGPNSRSK 543 (919)
T ss_pred HHHHhhccCCCcHHHHHHcCCEEEEeChhhhhhhhhhhccCCCcEeEcceEEEEECCCCCEeeEEEEecCCCCCCCcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999866666688
Q ss_pred eEEeCCCCCCCchHHHHHHHHHhhcccceeeeeecC
Q 007688 558 RVLTPAADATSNWLWQLAKAHVCSNDAGVHQLVNHW 593 (593)
Q Consensus 558 ~VfTPsd~~~~~~~W~LAKa~v~~aD~~~HQLisHW 593 (593)
+||||+++++++|.|+||||||++||++|||+|+||
T Consensus 544 ~VftP~~d~~~~w~W~LAK~~V~~aD~~~HQlisHl 579 (919)
T PLN02264 544 RVVTPPVDATSNWMWQLAKAHVCSNDAGVHQLVNHW 579 (919)
T ss_pred eeECCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999998777789999999999999999999999999
No 2
>PLN02305 lipoxygenase
Probab=100.00 E-value=1.3e-164 Score=1378.14 Aligned_cols=497 Identities=54% Similarity=0.965 Sum_probs=474.6
Q ss_pred ceeEEEEEEEEEecccccccccccchhhhhhhhcCCcEEEEEeecccCCCCCCCccccccccccccccCCcCcceeEEEE
Q 007688 95 VKFKVRAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTA 174 (593)
Q Consensus 95 ~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~d~~~g~gk~~~~~~l~~w~~~~~~~~~~~~y~~ 174 (593)
...+|||+|+||+|++++++++.++++|+++|++||+|+|||||+++||+||+||++ +++|++|++++...+++++|+|
T Consensus 80 ~~~~i~~~v~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~~~~~g~gk~~-~~~l~~~~~~~~~~~~~~~~~~ 158 (918)
T PLN02305 80 GGIDVRAVITIRKKIKEKITEKFEDQWEYFMNGIGQGILIQLVSEEIDPVTGSGKSV-ESSVRGWLPKPSNDPHIVEYAA 158 (918)
T ss_pred cCCeEEEEEEEEeecccchhhcccchhhHHHHhhCCeEEEEEEeccccCCCCCcccc-cchhhccccCCCCCCCceEEEE
Confidence 346999999999999999999999999999999999999999999999999999998 9999999976443277889999
Q ss_pred EEEecCCCCCceEEEEEecCCCceeeeeeEEeecCCceEEEEecccccCCCCCCCcceeecccccCcCCCcHHhHHHHHH
Q 007688 175 EFLVDSNFGTPGAITVANKHQKEFFLETITIEGFACGPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPAGLRALREK 254 (593)
Q Consensus 175 ~F~v~~~fG~pGAi~v~n~h~~e~fl~~i~l~~~~~~~i~F~CnSWV~~~~~~~~~RiFF~nk~yLP~~tP~~L~~~Re~ 254 (593)
+|+||++||+||||+|+|+|++||||++|+|+++|+|+|||+|||||||.++|+++||||+||+|||++||++|++|||+
T Consensus 159 ~f~~~~~fG~pGA~~v~N~h~~ef~l~~i~l~~~p~g~v~f~cnSWv~~~~~~~~~RiFF~nk~ylP~~tP~~l~~~Re~ 238 (918)
T PLN02305 159 DFTVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIKDLRRE 238 (918)
T ss_pred EEeeccccCCcceEEEEeCCCceEEEEEEEEecCCCCeEEEeccCccccCCCCCCCceEecCCCcCcccCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCccccCCeeeecccccCCCCCCCCCCCccccCCCCCCCCCCccCCCCCCCCCCccccccCCCCCCcccCC
Q 007688 255 ELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGEQRPYPRRCRTGRLPTDTDLLAESRIEKPLPIYVPR 334 (593)
Q Consensus 255 EL~~lRGdG~Gerk~~DRIYdydvYNDLG~Pd~~~~~~RPvLGGs~~PYPRR~RTGR~p~~~Dp~sEsr~~~~~~~yvPr 334 (593)
||++|||||+||||+||||||||||||||+||++++++||||||++|||||||||||+||++||++|+|.+.+..|||||
T Consensus 239 eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~~PYPRR~RTGR~~t~~Dp~~Esr~~~~~~~YvPr 318 (918)
T PLN02305 239 DLLSLRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPVLGGEEWPYPRRCRTGRPPTKKDPLCESRIEKPHPVYVPR 318 (918)
T ss_pred HHHHhcCCCCCcCCccccccchhhhccCCCCCCCccccCcccCCCCCCCCCcCcCCCCCCCCCCcccccccCCCCcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987666789999
Q ss_pred CCCCchhhhhhhhhchhhhhhhhhhHHHHHhhhcCCCCCCCHHhHHHHHhccccccccccccccccCCch-hhhhhhhcc
Q 007688 335 DEQFEESKQDAFSAGRLKGALHNLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPLP-NVVSKIQES 413 (593)
Q Consensus 335 DE~Fs~~K~~dF~~~~lka~~~~~ip~l~~~~~~~~~~F~sf~Di~~LY~~g~~lp~~~~~~~~~~~p~~-~~~~~~~~~ 413 (593)
||+|+|+|++||++++|||++|.++|+|+++++.++.+|+||+||++||++|++||....+.+++ +|+| ++++++.++
T Consensus 319 DE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~~~~F~~f~~i~~Ly~~g~~l~~~~~~~~~~-~p~~~~~~~~i~~~ 397 (918)
T PLN02305 319 DETFEEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYNDGILLKTEEPKDIGL-NPFLGNFMKQVLSV 397 (918)
T ss_pred CCCcccchhhhHHHHHHHHHHHhhhhHHHHhcCCCCCCCCCHHHHHHHhccCCcCCchhhhhhhc-CCchHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999999999999999999632233444 8887 899999888
Q ss_pred cccccccCCccccccccccccccHHHHHHHhhCCCccceeecccCCCCCCCCCCccCCCCccccHHHHhhhcCCCcHHHH
Q 007688 414 SQGLLKYNSPKILSRDKFAWLRDDEFARQALAGVNPVSIERLQAFPPVSNLDPKIYGPQESALKEEHIIGQLDGMSVQQA 493 (593)
Q Consensus 414 ~~~~lkfp~P~vi~~d~~~W~~DeeFarQ~LaGvNP~~I~rlte~P~~s~Ldp~~YG~~~s~IT~e~ie~~l~G~TleeA 493 (593)
++.+||||+|+||++|+++|++|+|||||||||+||++|++|++||++|+|||++||+|+|+||+|||+.+|+|+||+||
T Consensus 398 ~~~~lkf~~P~vi~~d~~~W~~DeeFaRQ~LaGvNP~~I~rl~efP~~skldp~~yG~~~s~iT~e~ve~~L~G~TleeA 477 (918)
T PLN02305 398 SERLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGPPESALTEELIERELEGMTVEKA 477 (918)
T ss_pred ccccccCCCcceeecccccccChHHHHHHHHcCCCChheeeccccCCccccCccccCCcCCCcCHHHHHhhcCCCcHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEeecCccccccccccccCCCcceecceeEEEeCCCCceeeEEEEecCCCCCCCCCCceEEeCCCCCCCchHHH
Q 007688 494 LEENKLYVLDFHDIYLPFLDRINALDGRKSYATRTIFFLNSLGTLKPIAIELSLPPSGPSPRSKRVLTPAADATSNWLWQ 573 (593)
Q Consensus 494 l~~grLFIlDY~D~~lp~l~~in~~~g~~~YAprtLffl~~dG~L~PlAIqLs~pp~~~~~~~~~VfTPsd~~~~~~~W~ 573 (593)
|++|||||+||||++|||+.++|+++++++|||+||||++++|+|+||||||+++++++++.+++||||++++++.|.|+
T Consensus 478 l~~~rLFIlDy~dl~lp~l~~in~l~~~~~YAprtLffL~~dG~L~PlAIqL~~~p~~~~p~~~~VftP~~d~~~~w~W~ 557 (918)
T PLN02305 478 IEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLPPTPSSPGNKFVYTHGHDATTHWIWK 557 (918)
T ss_pred HHcCCEEEEechhhhCcccccccccCCcccccceeEEEECCCCCEeeEEEEeeCCCCCCCCCcceeeCCCCCCCCchHHH
Confidence 99999999999999999999999999999999999999999999999999999998776667889999988888899999
Q ss_pred HHHHHHhhcccceeeeeecC
Q 007688 574 LAKAHVCSNDAGVHQLVNHW 593 (593)
Q Consensus 574 LAKa~v~~aD~~~HQLisHW 593 (593)
||||||++||++|||+|+||
T Consensus 558 LAK~~V~~aD~~~HQlisHl 577 (918)
T PLN02305 558 LAKAHVCSNDAGVHQLVNHW 577 (918)
T ss_pred HHHHHHHhccHHHHHHHHHH
Confidence 99999999999999999999
No 3
>PLN02337 lipoxygenase
Probab=100.00 E-value=1e-160 Score=1349.99 Aligned_cols=494 Identities=46% Similarity=0.788 Sum_probs=467.3
Q ss_pred EEEEEEEEEecccccccccccchhhhhhhhcCCcEEEEEeecccCC-CCC-CCcccccccccccccc-CCcCcceeEEEE
Q 007688 98 KVRAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDP-RTK-GPKKSREAVLKDWSKK-SNVKAERVHYTA 174 (593)
Q Consensus 98 ~~~~~v~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~d~-~~g-~gk~~~~~~l~~w~~~-~~~~~~~~~y~~ 174 (593)
+|||+|+||+|++++++++.++++|+++|++||+|+|||||+++|+ +|| +||+|++++|++|+++ +.+.+++++|+|
T Consensus 20 ~~~~~v~l~~k~~ld~~~~~~~~lD~~~~l~G~~v~lqLvS~~~~~p~~g~~gk~~k~a~l~~w~~~~~~~~~~~~~y~~ 99 (866)
T PLN02337 20 KIKGTVVLMKKNVLDFNDFNASVLDRVHELLGKGVSLQLISSTVVDPENGLRGKLGKEAYLEKWITTITSLTAGESAFKV 99 (866)
T ss_pred eEEEEEEEEEecccchhhcccchhhhHHHhcCCeEEEEEEeccccccccCCccccCCccchhhhccCCCCCCCCceEEEE
Confidence 8999999999999999999999999999999999999999998876 787 8999999999999976 666788889999
Q ss_pred EEEecCCCCCceEEEEEecCCCceeeeeeEEeecCC-ceEEEEecccccCCCCCCCcceeecccccCcCCCcHHhHHHHH
Q 007688 175 EFLVDSNFGTPGAITVANKHQKEFFLETITIEGFAC-GPVHFQCNSWVQSTKDHPGKRIFFANQPYLPSETPAGLRALRE 253 (593)
Q Consensus 175 ~F~v~~~fG~pGAi~v~n~h~~e~fl~~i~l~~~~~-~~i~F~CnSWV~~~~~~~~~RiFF~nk~yLP~~tP~~L~~~Re 253 (593)
+|+||++||+||||+|+|+|++||||++|+|+++|+ |+|||+|||||||+++|+++||||+||+|||++||++|++|||
T Consensus 100 ~F~~~~~fG~pGAi~V~N~h~~EffL~sitle~~p~~g~v~f~cnSWV~~~~~~~~~RiFF~nk~ylp~~tP~~l~~~R~ 179 (866)
T PLN02337 100 TFDWDEKIGVPGAFIIKNNHHSEFYLKTVTLEDVPGHGRVHFVCNSWIYPAKRYRYDRVFFSNKTYLPSQTPAPLRPYRE 179 (866)
T ss_pred EEEecccCCCcceEEEEecCCceEEEEEEEEecCCCCCcEEEecCCccccCCCCCCCceEecCCCcCcccccHHHHHHHH
Confidence 999999999999999999999999999999999998 9999999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCeeeecccccCCCCCCCCCCCccccCCCC-CCCCCCccCCCCCCCCCCccccccCCC-CCCcc
Q 007688 254 KELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGE-QRPYPRRCRTGRLPTDTDLLAESRIEK-PLPIY 331 (593)
Q Consensus 254 ~EL~~lRGdG~Gerk~~DRIYdydvYNDLG~Pd~~~~~~RPvLGGs-~~PYPRR~RTGR~p~~~Dp~sEsr~~~-~~~~y 331 (593)
+||++|||||+||||+||||||||||||||+||++++++||||||+ +|||||||||||+||++||++|+|... +..||
T Consensus 180 ~eL~~lrG~g~gerk~~dRiYdyd~YnDlg~pd~~~~~~RpvLGg~~~~pyPRR~rTgr~~t~~dp~~esr~~~~~~~~y 259 (866)
T PLN02337 180 EELVNLRGDGKGELKEWDRVYDYDYYNDLGDPDKGNPYARPVLGGSQEYPYPRRGRTGRKPTKTDPNSESRLPLLSLNIY 259 (866)
T ss_pred HHHHHhcCCCCCCCCcccchhhhhhhccCCCCCCCccccCccCCCCCCCCCCCcccCCCCCCCCCCccccccccCCCCcc
Confidence 9999999999999999999999999999999999999999999999 899999999999999999999999755 35689
Q ss_pred cCCCCCCchhhhhhhhhchhhhhhhhhhHHHHHhhhcCCCCCCCHHhHHHHHhcccccccc-ccccccccCCchhhhhhh
Q 007688 332 VPRDEQFEESKQDAFSAGRLKGALHNLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLG-LKDGLLKKLPLPNVVSKI 410 (593)
Q Consensus 332 vPrDE~Fs~~K~~dF~~~~lka~~~~~ip~l~~~~~~~~~~F~sf~Di~~LY~~g~~lp~~-~~~~~~~~~p~~~~~~~~ 410 (593)
|||||+|+++|++||++++|||++|+++|+|+++++.+..+|++|+||++||++|+++|.. ..+.+++.+|+ ++++++
T Consensus 260 vPrDE~f~~~k~~~f~~~~l~~~~~~~~p~~~~~~~~~~~~f~~f~~i~~ly~~g~~lp~~~~~~~~~~~~p~-~~~~~~ 338 (866)
T PLN02337 260 VPRDERFGHLKMSDFLAYALKAIAQVLVPELEALFDKTPNEFDSFEDVLKLYEGGIKLPNGPLLEELRKNIPL-EMLKEL 338 (866)
T ss_pred cCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhhcCCCCCCchHHHHhhhcChH-HHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999963 33456666887 677777
Q ss_pred -hcccccccccCCccccccccccccccHHHHHHHhhCCCccceeecccCCCCCCCCCCccCCCCccccHHHHhhhcCCCc
Q 007688 411 -QESSQGLLKYNSPKILSRDKFAWLRDDEFARQALAGVNPVSIERLQAFPPVSNLDPKIYGPQESALKEEHIIGQLDGMS 489 (593)
Q Consensus 411 -~~~~~~~lkfp~P~vi~~d~~~W~~DeeFarQ~LaGvNP~~I~rlte~P~~s~Ldp~~YG~~~s~IT~e~ie~~l~G~T 489 (593)
.++++.+||||+|+||++|+++|++|+|||||+|||+||++|+||++||++|+|||++||+++|+||++||+.+|+|+|
T Consensus 339 ~~~~~~~~l~fp~P~vi~~d~~~W~~DeeFarQ~LaG~NP~~I~rl~~~P~~~~ld~~~yg~~~s~iT~e~v~~~L~g~T 418 (866)
T PLN02337 339 LRTDGEYLLKFPMPQVIKEDKSAWRTDEEFAREMLAGVNPVVIRRLTEFPPKSKLDPKKYGDQNSSITEEHIEKNLEGLT 418 (866)
T ss_pred HhhcccccccCCCCceeecccccccCHHHHHHHHhcCCCChheeecccCCCcccCChhhcCCccCccCHHHHHhccCCcc
Confidence 5566999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCEEEeecCccccccccccccCCCcceecceeEEEeCCCCceeeEEEEecCCCCC--CCCCCceEEeCCCCCC
Q 007688 490 VQQALEENKLYVLDFHDIYLPFLDRINALDGRKSYATRTIFFLNSLGTLKPIAIELSLPPSG--PSPRSKRVLTPAADAT 567 (593)
Q Consensus 490 leeAl~~grLFIlDY~D~~lp~l~~in~~~g~~~YAprtLffl~~dG~L~PlAIqLs~pp~~--~~~~~~~VfTPsd~~~ 567 (593)
|+|||++|||||+||||.+|||+.++|...+ +.|||+||||++++|+|+||||||++|+.+ ..++.++||||+++++
T Consensus 419 l~eAl~~~rLfi~Dy~d~~lp~l~~in~~~~-k~yA~~tLffl~~dG~L~PlAIqL~~p~~~~~~~g~~~~VfTP~~~~~ 497 (866)
T PLN02337 419 VQEALEKNRLFILDHHDALMPYLRRINSTST-KTYATRTLLFLKDDGTLKPLAIELSLPHPQGDKFGAVSKVYTPAEDGV 497 (866)
T ss_pred HHHHHHcCCEEEEecchhcCcccccccCCCC-ccccceeEEEECCCCCEeEEEEEeccCCCCcccCCCCCCeECCCCCCC
Confidence 9999999999999999999999999998554 599999999999999999999999988532 3356789999998877
Q ss_pred CchHHHHHHHHHhhcccceeeeeecC
Q 007688 568 SNWLWQLAKAHVCSNDAGVHQLVNHW 593 (593)
Q Consensus 568 ~~~~W~LAKa~v~~aD~~~HQLisHW 593 (593)
++|.|+||||||++||++|||+|+||
T Consensus 498 ~~~~W~lAK~~v~~aD~~~HqlisHl 523 (866)
T PLN02337 498 EGSVWQLAKAYVAVNDSGYHQLISHW 523 (866)
T ss_pred CcchHHHHHHHHHHhhHHHHHHHHHH
Confidence 89999999999999999999999999
No 4
>PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents the C-terminal region of these proteins.; GO: 0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 2P0M_A 3RDE_B 2IUJ_A 1RRL_B 1JNQ_A ....
Probab=100.00 E-value=1e-108 Score=923.45 Aligned_cols=341 Identities=55% Similarity=0.964 Sum_probs=280.8
Q ss_pred cHHhHHHHHHHHHhhhCCCCCccccCCeeeecccccCCCCCCCCCCCccccCCCC-CCCCCCccCCCCCCCCCCcccccc
Q 007688 245 PAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGE-QRPYPRRCRTGRLPTDTDLLAESR 323 (593)
Q Consensus 245 P~~L~~~Re~EL~~lRGdG~Gerk~~DRIYdydvYNDLG~Pd~~~~~~RPvLGGs-~~PYPRR~RTGR~p~~~Dp~sEsr 323 (593)
|+||++|||+||++|||||+||||+||||||||||||||+||++++++||||||| +|||||||||||+|+++||.+|+|
T Consensus 1 ~~~l~~~R~~eL~~lrG~g~gerk~~dRiYdYd~YnDLG~pd~~~~~~RpvlGgs~~~PYPRR~RTGr~~~~~Dp~sEsr 80 (667)
T PF00305_consen 1 PAGLKKLREEELKNLRGDGTGERKEWDRIYDYDVYNDLGNPDKGPELARPVLGGSKEFPYPRRCRTGRPPTKTDPKSESR 80 (667)
T ss_dssp SGGGHHHHHHHHHHHHTTS-S---TT-----EE-B-SSSBGGGTGCG----BSSSSSS----EE----SBESSCTTSBGC
T ss_pred ChHHHHHHHHHHHHhcCCCCCccccccceeeeecccCCCCCCCCCcCCCCCCCCCCCCCCCccCCCCCCCCCCCccccCc
Confidence 7899999999999999999999999999999999999999999999999999998 999999999999999999999999
Q ss_pred CCCCCCcccCCCCCCchhhhhhhhhchhhhhhhhhhHHHHHhhhcCCCCCCCHHhHHHHHhccccccccccccccccCCc
Q 007688 324 IEKPLPIYVPRDEQFEESKQDAFSAGRLKGALHNLIPLLKASISARNHDFSGFSDIDSLYSEGLLLNLGLKDGLLKKLPL 403 (593)
Q Consensus 324 ~~~~~~~yvPrDE~Fs~~K~~dF~~~~lka~~~~~ip~l~~~~~~~~~~F~sf~Di~~LY~~g~~lp~~~~~~~~~~~p~ 403 (593)
. .+|||||||+|+++|++||.++++||++|.++|.|++++..+..+|+||+||++||++|+++|. +.+.+.+|+
T Consensus 81 ~---~~~YVPRDE~F~~~K~~dF~~~~lks~~~~llP~L~~~~~~~~~eF~sF~dId~LY~~g~~l~~---~~~~~~~~~ 154 (667)
T PF00305_consen 81 S---GDIYVPRDERFSEVKQSDFLANALKSLLHALLPALKSLFDDTPNEFDSFEDIDDLYEEGIKLPT---DLLKKLIPL 154 (667)
T ss_dssp ----SSGGS-GGGS-SCSSGGGHHHHHHHHHHHTHHHHHHHHTTSSTSSCSSHHHHHHHHTTTEE--H---HHHCCHTTS
T ss_pred c---ccccCCccccccchhHHHHHHHHHHHHHHhHHHHHHHHhcccCcccCCHHHHHHHHhccccchh---hHhhhcCcH
Confidence 3 4899999999999999999999999999999999999988889999999999999999999985 344455666
Q ss_pred hhhhhhhh-cccccccccCCccccccccccccccHHHHHHHhhCCCccceeecccCCCCCCCCCCccCCCCccccHHHHh
Q 007688 404 PNVVSKIQ-ESSQGLLKYNSPKILSRDKFAWLRDDEFARQALAGVNPVSIERLQAFPPVSNLDPKIYGPQESALKEEHII 482 (593)
Q Consensus 404 ~~~~~~~~-~~~~~~lkfp~P~vi~~d~~~W~~DeeFarQ~LaGvNP~~I~rlte~P~~s~Ldp~~YG~~~s~IT~e~ie 482 (593)
.+++++. .+++.++|||+|+|++.++++|++|+|||||+|||+||++|++|++||++|+|||++||+++|+||++||+
T Consensus 155 -~~~~~~~~~~~~~~~kf~~p~v~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~~~ld~~~yg~~~s~it~e~i~ 233 (667)
T PF00305_consen 155 -ELLKELFRTDGENILKFPTPQVIERDRFAWRTDEEFARQRLAGVNPVVIRRLTEFPPKSKLDPAIYGDQESPITDEHIE 233 (667)
T ss_dssp -TTCCTTSBETSSSEEB----HHHHCHHHHTTSHHHHHHHHHHSSSTTSEEE-SSSSTTS-SSHHCCTSSB-STTHHHHH
T ss_pred -HHHHHHHhhcccceeeCCCCccchhhhhccCChHHHHHHHHcCCCchHhhccccCCccccccHhhcCCccCCchHHHhh
Confidence 4455554 45689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCcHHHHHhcCCEEEeecCccccccccccccCCCcceecceeEEEeCCCCceeeEEEEecCCCCCCCCCCceEEeC
Q 007688 483 GQLDGMSVQQALEENKLYVLDFHDIYLPFLDRINALDGRKSYATRTIFFLNSLGTLKPIAIELSLPPSGPSPRSKRVLTP 562 (593)
Q Consensus 483 ~~l~G~TleeAl~~grLFIlDY~D~~lp~l~~in~~~g~~~YAprtLffl~~dG~L~PlAIqLs~pp~~~~~~~~~VfTP 562 (593)
..|+|+||++||++|||||+||||+++|++.+||. .+++.|||+||||++++|+|+||||||++|+....++.++||||
T Consensus 234 ~~l~g~tl~~al~~~rLfi~Dy~~~~~~~~~~i~~-~~~~~~A~~~Lf~l~~~g~L~PlAIqL~~p~~~~~~~~~~v~tP 312 (667)
T PF00305_consen 234 PQLEGLTLEEALKDGRLFILDYHDLFGPYLNKINE-KGRYAYAPRALFFLNPDGTLKPLAIQLSQPGPEGPPQFNPVFTP 312 (667)
T ss_dssp HHCHCS-HHHHHHTT-EEEEEEGGGTTHHHHHHTT-CCGBG-EEEEEEEEETTSEEEEEEEECSECBTTCS-EEEEEE-T
T ss_pred hccCCCcHHHHHhcCCeEEEeehhhcccccccccc-CCcEeccceeEEEEcCCCCEeeeEEeccCCCCcccCccceeeec
Confidence 99999999999999999999999999999999998 78899999999999999999999999988864444567899999
Q ss_pred CCCCCCchHHHHHHHHHhhcccceeeeeecC
Q 007688 563 AADATSNWLWQLAKAHVCSNDAGVHQLVNHW 593 (593)
Q Consensus 563 sd~~~~~~~W~LAKa~v~~aD~~~HQLisHW 593 (593)
+++++.+|.|+||||||++||++|||+|+||
T Consensus 313 ~~d~~~~~~W~lAK~~v~~aD~~~HqlisHl 343 (667)
T PF00305_consen 313 SDDGTEDWLWLLAKAHVQVADANYHQLISHL 343 (667)
T ss_dssp TSSSHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred CCCCccchHHHHHHHHHHhhhHHHHHHHhhh
Confidence 9666667999999999999999999999999
No 5
>cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins. Lipoxygenases are nonheme, nonsulfur iron dioxygenases that act on lipid substrates containing one or more (Z,Z)-1,4-pentadiene moieties. In plants, the immediate products are involved in defense mechanisms against pathogens and may be precursors of metabolic regulators. The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=100.00 E-value=2.7e-44 Score=333.69 Aligned_cols=135 Identities=48% Similarity=0.828 Sum_probs=129.2
Q ss_pred EEEEEEEEEecccccccccccchhhhhhhhcCCcEEEEEeecccCCCCCCCccccccccccccccCCcCcceeEEEEEEE
Q 007688 98 KVRAVLTVRKNIKEDFKETLVNQFDALTEKIGRNVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFL 177 (593)
Q Consensus 98 ~~~~~v~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~d~~~g~gk~~~~~~l~~w~~~~~~~~~~~~y~~~F~ 177 (593)
+|||+|+||+|++++++++. +.+|+++|++||+|+|||||+++||+||+||++++++|++|.++. ++++.|+++|+
T Consensus 2 ~vka~V~v~~k~~~~~~~~~-~~~D~~~~llGk~v~lqLVSs~~d~~tg~~k~~~~~~l~~~~~~~---~~e~~y~~~F~ 77 (137)
T cd01751 2 KVKATVTVMKKNKLDLNDDG-SGLDDLDDLLGRSLLLELVSSELDPKTGKGKKGKAAFLEGWGKSL---AGESAYEAEFE 77 (137)
T ss_pred EEEEEEEEEEeecccccccc-chhhhHHHhhCCeEEEEEEEeeecCCCCCcccccceeeecccccC---CcceEEEEEEE
Confidence 79999999999999999987 899999999999999999999999999999999999999998532 66779999999
Q ss_pred ecCCCCCceEEEEEecCCCceeeeeeEEeecCC-ceEEEEecccccCCCCCCCcceeecc
Q 007688 178 VDSNFGTPGAITVANKHQKEFFLETITIEGFAC-GPVHFQCNSWVQSTKDHPGKRIFFAN 236 (593)
Q Consensus 178 v~~~fG~pGAi~v~n~h~~e~fl~~i~l~~~~~-~~i~F~CnSWV~~~~~~~~~RiFF~n 236 (593)
||++||+||||+|+|+|++||||++|+|+++|+ |+|||+|||||||+++|+++||||+|
T Consensus 78 v~~~fG~pGAi~V~N~h~~EffLksitLe~~p~~g~v~F~CNSWVyp~~~~~~~RiFFsN 137 (137)
T cd01751 78 VPASFGPPGAVLVKNEHHSEFFLKSITLEGFGGSGTITFVCNSWVYPKKDYPDKRIFFPN 137 (137)
T ss_pred eecccCCccEEEEEECCCceEEEEEEEEeCCCCCccEEEEccccCccCCCCCCCCEEccC
Confidence 999999999999999999999999999999998 99999999999999999999999998
No 6
>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain.
Probab=99.29 E-value=1.6e-11 Score=107.87 Aligned_cols=84 Identities=39% Similarity=0.647 Sum_probs=65.5
Q ss_pred cEEEEEeecccCCCCCCCccccccccccccccCCcCcceeEEEEEEEecCCCCCceEEEEEecC-CCceeeeeeEEeecC
Q 007688 131 NVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKH-QKEFFLETITIEGFA 209 (593)
Q Consensus 131 ~v~lqLvS~~~d~~~g~gk~~~~~~l~~w~~~~~~~~~~~~y~~~F~v~~~fG~pGAi~v~n~h-~~e~fl~~i~l~~~~ 209 (593)
+|.|+|++++.| +|. +....++.|. ... ...|+..|+++.++|.+++|.|.|.+ +.+|||++|+|++.+
T Consensus 20 ~V~l~L~g~~~~--s~~---~~~~~~~~~~----f~~-g~~~~f~v~~~~~lG~l~~v~v~~d~~~~~w~l~~V~V~~~~ 89 (105)
T smart00308 20 SVSLSLVGAEGD--GKE---SKLDYLFKGI----FAR-GSTYEFTFDVDEDFGELGAVKIKNEHRHPEWFLKSITVKDLP 89 (105)
T ss_pred eEEEEEEeCCCC--Ccc---eeccccCCcc----ccC-CceEEEEEecccCCCCcEEEEEEeCCCCCCeEEEEEEEEECC
Confidence 699999998866 222 2223444442 222 34788888999999999999999999 899999999998876
Q ss_pred C-ceEEEEecccccCC
Q 007688 210 C-GPVHFQCNSWVQST 224 (593)
Q Consensus 210 ~-~~i~F~CnSWV~~~ 224 (593)
. ..++|+||+||++.
T Consensus 90 ~~~~~~F~c~~Wl~~~ 105 (105)
T smart00308 90 TGGKYHFPCNSWVYPD 105 (105)
T ss_pred CCCEEEEEcCceeCCC
Confidence 5 78999999999863
No 7
>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents a domain found in lipoxygenases and other enzymes. It is known as the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain, is found in a variety of membrane or lipid associated proteins. Structurally, this domain forms a beta-sandwich composed of two sheets of four strands each [, , ]. The most highly conserved regions coincide with the beta-strands, with most of the highly conserved residues being buried within the protein. An exception to this is a surface lysine or arginine that occurs on the surface of the fifth beta-strand of the eukaryotic domains. In pancreatic lipase, the lysine in this position forms a salt bridge with the procolipase protein. The conservation of a charged surface residue may indicate the location of a conserved ligand-binding site. It is thought that this domain may mediate membrane attachment via other protein binding partners.; GO: 0005515 protein binding; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 3O8Y_B 3V99_B 3V92_A 3V98_B 1HPL_A ....
Probab=98.88 E-value=6.2e-09 Score=91.61 Aligned_cols=64 Identities=20% Similarity=0.451 Sum_probs=57.0
Q ss_pred EEEEEEEecCCCCCceEEEEEec---CCCceeeeeeEEeecCC-ceEEEEecccccCCCCCCCcceee
Q 007688 171 HYTAEFLVDSNFGTPGAITVANK---HQKEFFLETITIEGFAC-GPVHFQCNSWVQSTKDHPGKRIFF 234 (593)
Q Consensus 171 ~y~~~F~v~~~fG~pGAi~v~n~---h~~e~fl~~i~l~~~~~-~~i~F~CnSWV~~~~~~~~~RiFF 234 (593)
..+..|+.+.++|.+.+|.|.+. +...|||++|+|...+. ....|+||+||....+++.+||||
T Consensus 46 ~d~F~i~~~~~lG~i~~i~i~~~~~~~~~~W~l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~rvf~ 113 (113)
T PF01477_consen 46 TDTFTIETPEDLGEIQKIRIWHDGSGPSPSWYLDSVVVTDGETGRTYTFPCNRWLDPDKDYKTERVFF 113 (113)
T ss_dssp EEEEEEEESSCGCSEEEEEEEEESSSSSSEEEEEEEEEEETTTSEEEEEEEEEEESTTEGCSSEEEEE
T ss_pred eEEeeeeecccCCCCcEEEEEEccCCCccceEEEEEEEEeCCCCcEEEEEcCCEECCCCCCCCccEEC
Confidence 45566667889999999999988 78999999999988665 788999999999999999999998
No 8
>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates.
Probab=98.74 E-value=8.1e-08 Score=85.76 Aligned_cols=64 Identities=17% Similarity=0.239 Sum_probs=55.6
Q ss_pred EEEEEEEecCCCCCceEEEEEecCCC---ceeeeeeEEeecCC-ceEEEEecccccCCCCCCCcceee
Q 007688 171 HYTAEFLVDSNFGTPGAITVANKHQK---EFFLETITIEGFAC-GPVHFQCNSWVQSTKDHPGKRIFF 234 (593)
Q Consensus 171 ~y~~~F~v~~~fG~pGAi~v~n~h~~---e~fl~~i~l~~~~~-~~i~F~CnSWV~~~~~~~~~RiFF 234 (593)
.++..++++.++|.+.+|.|.+.+.. +|||++|+|.+... ...+|+||+||.....++..|+|.
T Consensus 49 ~~~f~v~~~~~lG~i~~v~l~~d~~g~~~~W~l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~r~~~ 116 (116)
T cd00113 49 TDTFQIDLKLDIGDITKVYLRRDGSGLSDGWYCESITVQALGTKKVYTFPVNRWVLGGKWYTSVRSLK 116 (116)
T ss_pred ceEEEEeccCCCcCeEEEEEEECCCCCCCCEEEeEEEEEeCCCCCEEEEEeCCCcccCCCCCceeecC
Confidence 45666677889999999999998865 99999999987765 789999999999999998888874
No 9
>cd02899 PLAT_SR Scavenger receptor protein. A subfamily of PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. This subfamily contains Toxoplasma gondii Scavenger protein TgSR1.
Probab=98.15 E-value=9.9e-06 Score=73.50 Aligned_cols=78 Identities=13% Similarity=0.227 Sum_probs=54.6
Q ss_pred cEEEEEeecccCCCCCCCccccccccccccccCCcCcceeEEEEEEEecCCCCCceEEEEEecC-CCceeeeeeEEeecC
Q 007688 131 NVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKH-QKEFFLETITIEGFA 209 (593)
Q Consensus 131 ~v~lqLvS~~~d~~~g~gk~~~~~~l~~w~~~~~~~~~~~~y~~~F~v~~~fG~pGAi~v~n~h-~~e~fl~~i~l~~~~ 209 (593)
+|.|+||-++-+ ++... |.+=.. .++ ...|.++ ++++|..-.|.|.|.. ...|||+.|+|.+..
T Consensus 20 ~V~i~L~G~~g~--S~~~~------L~~~F~---~G~-~d~F~v~---~~dLG~l~~i~l~n~g~~~~Wf~~~V~V~~~~ 84 (109)
T cd02899 20 TIEITLLGSSGR--SNPKT------LSQGFY---PGS-LKRIRFR---AADVGDINAIILSNTALNDPWYCDYVRIKSED 84 (109)
T ss_pred eEEEEEEECCCC--cCCEE------ccCccC---CCc-eEEEEEC---ccccCceEEEEEECCCCCCCceeeEEEEECCC
Confidence 599999976542 23322 221011 122 3356554 7999999999998876 678999999998843
Q ss_pred CceEEEEecccccC
Q 007688 210 CGPVHFQCNSWVQS 223 (593)
Q Consensus 210 ~~~i~F~CnSWV~~ 223 (593)
+...+||||+|+..
T Consensus 85 g~~~~Fpc~rWla~ 98 (109)
T cd02899 85 GKVFAFNVKRWIGY 98 (109)
T ss_pred CCEEEEEcceeeCC
Confidence 47788999999964
No 10
>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=97.73 E-value=0.0003 Score=64.07 Aligned_cols=93 Identities=24% Similarity=0.439 Sum_probs=60.3
Q ss_pred cEEEEEeecccCCCCCCCccccccccccccccCCcCcc-eeEEEEEEEecCCCCCceEEEEEecC---CCceeeeeeEEe
Q 007688 131 NVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAE-RVHYTAEFLVDSNFGTPGAITVANKH---QKEFFLETITIE 206 (593)
Q Consensus 131 ~v~lqLvS~~~d~~~g~gk~~~~~~l~~w~~~~~~~~~-~~~y~~~F~v~~~fG~pGAi~v~n~h---~~e~fl~~i~l~ 206 (593)
+|.++|+-+.-+ ++ .-.|..+........+ ...|.++ . .++|.+-.|.|.... ...|||+.|+|.
T Consensus 20 ~V~i~L~G~~g~--s~------~~~L~~~~~~~~FerGs~d~F~i~--~-~~lG~l~~i~i~~d~~g~~~~W~~~~V~V~ 88 (120)
T cd01756 20 NVFITLYGENGD--TG------KRKLKKSNNKNKFERGQTDKFTVE--A-VDLGKLKKIRIGHDNSGLGAGWFLDKVEIR 88 (120)
T ss_pred EEEEEEEeCCCc--cc------cEEccCCCcCCcccCCCeEEEEEE--e-cCCCCeEEEEEEECCCCCCCCcEEeEEEEE
Confidence 588888864422 22 2345443111122222 2355554 4 799999999998765 468999999998
Q ss_pred ecCC-ceEEEEecccccCCCCC-CCcceee
Q 007688 207 GFAC-GPVHFQCNSWVQSTKDH-PGKRIFF 234 (593)
Q Consensus 207 ~~~~-~~i~F~CnSWV~~~~~~-~~~RiFF 234 (593)
+... ...+|+||+|+...+.. .-.|+|.
T Consensus 89 ~~~~~~~~~F~~~~Wl~~~~~dg~~~r~~~ 118 (120)
T cd01756 89 EPGTGDEYTFPCNRWLDKDEDDGQIVRELY 118 (120)
T ss_pred ECCCceEEEEEeCCccCCCCCCCEEEEEEE
Confidence 7654 67889999999886542 3356664
No 11
>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and plasma lipoproteins. Both types of enzymes are cytosolic but need this domain to access their sequestered membrane or micelle bound substrates.
Probab=97.69 E-value=0.00019 Score=65.19 Aligned_cols=85 Identities=19% Similarity=0.323 Sum_probs=56.9
Q ss_pred cEEEEEeecccCCCCCCCccccccccccccccCCcCcceeEEEEEEEecCCCCCceEEEEEecC---CCceeeeeeEEee
Q 007688 131 NVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKH---QKEFFLETITIEG 207 (593)
Q Consensus 131 ~v~lqLvS~~~d~~~g~gk~~~~~~l~~w~~~~~~~~~~~~y~~~F~v~~~fG~pGAi~v~n~h---~~e~fl~~i~l~~ 207 (593)
+|.|+|+-++.+. +. ..|..... ....+. ..+..+.++.++|.+-.|.|.... ...|||+.|+|++
T Consensus 20 ~V~i~l~G~~g~S--~~------~~L~~~~~--~FerG~-~d~F~v~~~~~lG~l~~i~i~~d~~g~~~~W~l~~V~V~~ 88 (113)
T cd01753 20 YIYLTLVGTAGES--EK------QLLDRPGY--DFERGA-VDEYKVKVPEDLGELLLVRLRKRKYLLFDAWFCNYITVTG 88 (113)
T ss_pred EEEEEEEECCCcc--cC------EEcCCCCC--ccCCCC-eeEEEEecccCCCCcEEEEEEECCCCCCCCeeecEEEEEc
Confidence 5899999766542 22 12222111 122222 233344557899999999998765 6799999999987
Q ss_pred cCCceEEEEecccccCCCC
Q 007688 208 FACGPVHFQCNSWVQSTKD 226 (593)
Q Consensus 208 ~~~~~i~F~CnSWV~~~~~ 226 (593)
..+...+||||+|+.....
T Consensus 89 ~~~~~~~F~c~rWl~~~~~ 107 (113)
T cd01753 89 PGGDEYHFPCYRWIEGYGT 107 (113)
T ss_pred CCCCEEEEEhHHeECCCCE
Confidence 6657788999999977554
No 12
>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins. Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological functions remain poorly defined. In human, mutations in polycystin-1 (PKD1) and polycystin-2 (PKD2) have been shown to be the cause for autosomal dominant polycystic kidney disease (ADPKD). The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=97.37 E-value=0.0011 Score=60.58 Aligned_cols=93 Identities=17% Similarity=0.310 Sum_probs=59.4
Q ss_pred cEEEEEeecccCCCCCCCccccccccccccccCCcCcceeEEEEEEEecCCCCCceEEEEEecC---CCceeeeeeEEee
Q 007688 131 NVVLELVGTEVDPRTKGPKKSREAVLKDWSKKSNVKAERVHYTAEFLVDSNFGTPGAITVANKH---QKEFFLETITIEG 207 (593)
Q Consensus 131 ~v~lqLvS~~~d~~~g~gk~~~~~~l~~w~~~~~~~~~~~~y~~~F~v~~~fG~pGAi~v~n~h---~~e~fl~~i~l~~ 207 (593)
+|.|+|+.+.-+. +. -.|.... ......+. .++..+..+.+.|.+-.|.|.... ...|||++|+|.+
T Consensus 20 ~V~i~L~G~~g~s--~~------~~L~~~~-~~~F~rG~-~~~f~i~~~~dlG~l~~i~l~hd~~g~~~~W~l~~V~V~~ 89 (120)
T cd01752 20 KVTITLYGAEGES--EP------HHLRDPE-KPIFERGS-VDSFLLTTPFPLGELQSIRLWHDNSGLSPSWYLSRVIVRD 89 (120)
T ss_pred EEEEEEEeCCCCc--cc------EEcCCCC-ccceeCCC-eeEEEecCccCCCCccEEEEEECCCCCCCCeEEEEEEEEE
Confidence 5889999766432 11 1233211 11222222 344444556799999999996443 6799999999987
Q ss_pred cCC-ceEEEEecccccCCCCC-CCccee
Q 007688 208 FAC-GPVHFQCNSWVQSTKDH-PGKRIF 233 (593)
Q Consensus 208 ~~~-~~i~F~CnSWV~~~~~~-~~~RiF 233 (593)
... ...+|+||+|+...+.. .-.|+|
T Consensus 90 ~~t~~~~~F~~~rWl~~~~~d~~~~r~~ 117 (120)
T cd01752 90 LQTGKKWFFLCNDWLSVEEGDGTVERTF 117 (120)
T ss_pred CCCCcEEEEEeCcEECCcCCCCEEEEEE
Confidence 654 67889999999876543 334554
No 13
>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family. PLAT/LH2 domains consists of an eight stranded beta-barrel. In RabIP1 this domain may participate in lipid-mediated modulation of Rab6IP1's function via it's generally proposed function of mediating interaction with lipids or membrane bound proteins.
Probab=97.15 E-value=0.0013 Score=60.22 Aligned_cols=47 Identities=15% Similarity=0.446 Sum_probs=39.8
Q ss_pred CCCCCceEEEEEecC---CCceeeeeeEEeecCC-ceEEEEecccccCCCC
Q 007688 180 SNFGTPGAITVANKH---QKEFFLETITIEGFAC-GPVHFQCNSWVQSTKD 226 (593)
Q Consensus 180 ~~fG~pGAi~v~n~h---~~e~fl~~i~l~~~~~-~~i~F~CnSWV~~~~~ 226 (593)
.++|..-.|.|.... ...|||+.|.|++.+. ...+||||+|+.-.+.
T Consensus 50 ~~LG~L~~irIwHDnsG~~~~Wfl~~V~V~d~~t~~~~~FpC~rWLa~~~~ 100 (114)
T cd01757 50 QNLGKLTTVQIGHDNSGLLAKWLVEYVMVRNEITGHTYKFPCGRWLGEGVD 100 (114)
T ss_pred CCcCCcEEEEEEECCCCCCCCeeeeEEEEEeCCCCCEEEEecCceecCCCC
Confidence 999999999997544 6799999999998765 6789999999976553
No 14
>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function. Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=96.59 E-value=0.0056 Score=57.28 Aligned_cols=54 Identities=6% Similarity=0.216 Sum_probs=42.0
Q ss_pred EEEEEEEecCCCCCceEEEEEecC---CCceeeeeeEEeecCC----ceEEEEecccccCCCC
Q 007688 171 HYTAEFLVDSNFGTPGAITVANKH---QKEFFLETITIEGFAC----GPVHFQCNSWVQSTKD 226 (593)
Q Consensus 171 ~y~~~F~v~~~fG~pGAi~v~n~h---~~e~fl~~i~l~~~~~----~~i~F~CnSWV~~~~~ 226 (593)
.|.++ .+.+.|.+-.|.|.... ...|||..|+|.+... ...+||||+|+...+.
T Consensus 59 ~F~v~--~~~~lG~l~~irI~HDn~G~~p~W~l~~V~V~d~~~~~~~~~~~F~c~rWLa~d~~ 119 (129)
T cd01754 59 RFSGR--GPCLPSPPCWMNLTSDGTGNHPGWYVNYVEVTQAGQHAPCMQHLFAVEQWLATDES 119 (129)
T ss_pred EEEEE--eccCCCCeEEEEEEECCCCCCCCcccCEEEEEeCCCCCcCcEEEEEecEeccCCCC
Confidence 56554 46789999999997543 6799999999987542 3789999999976554
No 15
>PF03802 CitX: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; InterPro: IPR005551 Members of this protein family are annotated as CitX, containing the CitX domain, the domain is also found in the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25 from EC), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems.; GO: 0051191 prosthetic group biosynthetic process
Probab=48.25 E-value=10 Score=37.18 Aligned_cols=49 Identities=31% Similarity=0.466 Sum_probs=29.8
Q ss_pred CcHHhHHHHHHHHHhhhCCCCCccccCCeeeecccccCCCCCCCCCCCccccCCCCCCCCCCccCC
Q 007688 244 TPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGEQRPYPRRCRT 309 (593)
Q Consensus 244 tP~~L~~~Re~EL~~lRGdG~Gerk~~DRIYdydvYNDLG~Pd~~~~~~RPvLGGs~~PYPRR~RT 309 (593)
.++...|..--+|++-- ..=|++|.|||+.-|. .+.|.-|| +| ||||=-
T Consensus 89 ~~a~~vK~~~i~iEe~h--------plGRL~DiDV~~~~g~-----~iSR~~lg---~~-~R~Cli 137 (170)
T PF03802_consen 89 GDAEEVKRIMIEIEESH--------PLGRLFDIDVLDPDGK-----QISREDLG---LP-PRRCLI 137 (170)
T ss_pred CCHHHHHHHHHHHHccC--------cchheEEEeeecCCCC-----ccCHHHcC---CC-CCcccC
Confidence 34444444555555433 3448999999955344 45677777 44 788853
No 16
>TIGR03124 ctirate_citX holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems.
Probab=43.23 E-value=11 Score=36.95 Aligned_cols=50 Identities=30% Similarity=0.495 Sum_probs=29.5
Q ss_pred CCCcHHhHHHHHHHHHhhhCCCCCccccCCeeeecccccCCCCCCCCCCCccccCCCCCCCCCCccC
Q 007688 242 SETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGEQRPYPRRCR 308 (593)
Q Consensus 242 ~~tP~~L~~~Re~EL~~lRGdG~Gerk~~DRIYdydvYNDLG~Pd~~~~~~RPvLGGs~~PYPRR~R 308 (593)
-+.|+.-.|..-=+|++--- -=|++|.|||+.-|. .+.|--|| +| ||||=
T Consensus 85 v~~~a~~vK~~~i~iEe~hp--------lGRL~DlDV~~~~g~-----~iSR~~lg---~~-~R~Cl 134 (165)
T TIGR03124 85 VDAPALELKRLMIKLEESHP--------LGRLWDIDVLDADGK-----SLSRTDLG---LP-PRKCL 134 (165)
T ss_pred eCCCHHHHHHHHHHHHhCCc--------hhhheeheeecCCCC-----CcCHHHcC---CC-CCeee
Confidence 44454434444444444332 227999999975343 45677776 56 88885
No 17
>PF11248 DUF3046: Protein of unknown function (DUF3046); InterPro: IPR021408 This family of proteins with unknown function appears to be restricted to Actinobacteria.
Probab=31.30 E-value=21 Score=29.93 Aligned_cols=23 Identities=30% Similarity=0.642 Sum_probs=20.6
Q ss_pred cccHHHHhhhcCCCcHHHHHhcC
Q 007688 475 ALKEEHIIGQLDGMSVQQALEEN 497 (593)
Q Consensus 475 ~IT~e~ie~~l~G~TleeAl~~g 497 (593)
.|..+|+-..|+|.|..|||++|
T Consensus 21 ~la~dhvL~~LGgrT~~eAL~~G 43 (63)
T PF11248_consen 21 SLARDHVLSELGGRTAAEALEAG 43 (63)
T ss_pred HHHHhcchhhcCCcCHHHHHHcC
Confidence 67788888899999999999987
No 18
>cd01755 PLAT_lipase PLAT/ LH2 domain present in connection with a lipase domain. This family contains two major subgroups, the lipoprotein lipase (LPL) and the pancreatic triglyceride lipase. LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs). The central role of triglyceride lipases is in energy production. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=31.02 E-value=2.3e+02 Score=25.97 Aligned_cols=50 Identities=10% Similarity=0.078 Sum_probs=38.4
Q ss_pred eEEEEEEEecCCCCCceEEEEE--ecC--------CCceeeeeeEEeecCCceEEEEecc
Q 007688 170 VHYTAEFLVDSNFGTPGAITVA--NKH--------QKEFFLETITIEGFACGPVHFQCNS 219 (593)
Q Consensus 170 ~~y~~~F~v~~~fG~pGAi~v~--n~h--------~~e~fl~~i~l~~~~~~~i~F~CnS 219 (593)
..|+.-+..|.++|..-.|.+. |.- ...||++.|+|++...+.-...|.+
T Consensus 46 ~~~sfli~t~~~lG~l~~v~~~~dn~~~~~~~~~~~p~~~~~~I~Vq~get~~~~~FC~~ 105 (120)
T cd01755 46 KTYSFLIDTEVDIGDLLKVKFKWENNVINSNSGETLPKLGARKIRVKSGETQKKFTFCSQ 105 (120)
T ss_pred CEEEEEEEcCCCccceEEEEEEEcCCCcccccccCCCcEEEEEEEEEECCCCCEEEEECC
Confidence 4677777778888888888774 222 4589999999988777777777877
No 19
>KOG2080 consensus Uncharacterized conserved protein, contains DENN and RUN domains [Signal transduction mechanisms]
Probab=28.27 E-value=27 Score=42.17 Aligned_cols=54 Identities=19% Similarity=0.449 Sum_probs=38.4
Q ss_pred EEEEEEecCCCCCceEEEEEecC---CCceeeeeeEEe-ecCCceEEEEecccccCCCC
Q 007688 172 YTAEFLVDSNFGTPGAITVANKH---QKEFFLETITIE-GFACGPVHFQCNSWVQSTKD 226 (593)
Q Consensus 172 y~~~F~v~~~fG~pGAi~v~n~h---~~e~fl~~i~l~-~~~~~~i~F~CnSWV~~~~~ 226 (593)
-+..|+. .++|..--+.|--.. ...||++.|.+. .+-|.++-|||++|.-+..+
T Consensus 1013 ~~f~F~~-kNLG~LtT~rIGHdnS~~~~kW~vEyV~vRNEiTG~TYKFPCGrw~G~ged 1070 (1295)
T KOG2080|consen 1013 PLFKFDH-KNLGILSTLRIGHQQSEKPVQWFLEYVLVRNEITGQTYKFPCGRWFGNGED 1070 (1295)
T ss_pred ceeEEec-cccceeeeEEecccCCCcchHHHHHHhhhhceeccceeccccccccCCccc
Confidence 3455553 899988877774222 468999999773 34457899999999876544
No 20
>PRK01392 citX 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase; Reviewed
Probab=23.51 E-value=40 Score=33.55 Aligned_cols=56 Identities=34% Similarity=0.499 Sum_probs=30.2
Q ss_pred cCcCCCcHHhHHHHHHHHHhhhCCCCCccccCCeeeecccccCCCCCCCCCCCccccCCCCCCCCCCccC
Q 007688 239 YLPSETPAGLRALREKELKDIRGTGKGVRKLSDRIYDYDVYNDLGNPDRGSEFVRPSLGGEQRPYPRRCR 308 (593)
Q Consensus 239 yLP~~tP~~L~~~Re~EL~~lRGdG~Gerk~~DRIYdydvYNDLG~Pd~~~~~~RPvLGGs~~PYPRR~R 308 (593)
|+--+.|+.-.|..-=+|++--- -=|++|.|||+--|. .+..+.|--|| +| ||||=
T Consensus 88 ~~~v~~~a~~vK~~~i~iEe~hp--------lGRL~DiDV~~~~~~--~~~~iSR~~lg---~p-~R~Cl 143 (180)
T PRK01392 88 YLAIALPARDLKLAMIALEQSHP--------LGRLWDLDVLTLEGE--IPHQLSRTDLG---LP-PRRCL 143 (180)
T ss_pred EEEeCCCHHHHHHHHHHHHhcCc--------chhheeeeeeccCCC--CcCccCHHHcC---CC-CCeee
Confidence 33344554444555555554332 237999999952111 11235666666 45 78875
No 21
>cd01759 PLAT_PL PLAT/LH2 domain of pancreatic triglyceride lipase. Lipases hydrolyze phospholipids and triglycerides to generate fatty acids for energy production or for storage and to release inositol phosphates that act as second messengers. The central role of triglyceride lipases is in energy production. The proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=21.99 E-value=4.7e+02 Score=24.15 Aligned_cols=49 Identities=27% Similarity=0.291 Sum_probs=35.8
Q ss_pred EEEEEEEecCCCCCceEEEEE-ecC-----CCceeeeeeEEeecCCceEEEEecc
Q 007688 171 HYTAEFLVDSNFGTPGAITVA-NKH-----QKEFFLETITIEGFACGPVHFQCNS 219 (593)
Q Consensus 171 ~y~~~F~v~~~fG~pGAi~v~-n~h-----~~e~fl~~i~l~~~~~~~i~F~CnS 219 (593)
+|+.-++.|.|.|..-.|..+ +++ ...++++.|+|+.-.++...-.|.+
T Consensus 45 tys~li~~d~dvG~l~~Vkf~W~~~~~n~~~p~~~~~~I~Vq~Ge~~~~~~FC~~ 99 (113)
T cd01759 45 TYSAFIDVDVDVGPLTKVKFIWNNNVINITLPKVGAEKITVQSGKDGKVFNFCSS 99 (113)
T ss_pred EEEEEEEccCCCCCEEEEEEEEeCCccCCCCCeEEEEEEEEEeCCCccEEEECCC
Confidence 677777777888877776553 222 4688999999986666667777877
Done!