BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007691
(593 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q681K7|GEX1_ARATH Protein GAMETE EXPRESSED 1 OS=Arabidopsis thaliana GN=GEX1 PE=1
SV=1
Length = 593
Score = 619 bits (1597), Expect = e-176, Method: Compositional matrix adjust.
Identities = 325/577 (56%), Positives = 428/577 (74%), Gaps = 11/577 (1%)
Query: 19 CQSWGWFSSGSS-AEKTQQSDYPRDISNGFVAEFSMKGLHNEKGKQLVEDAKRRLIGSNA 77
C SWGWFSS SS AE S + R + +FSM+ ++K Q++E+ +L+G +
Sbjct: 24 CHSWGWFSSSSSSAEDPYSSSFSRSRKSN--PDFSMEVFSDQKAVQVLEN---KLVGLTS 78
Query: 78 CWQNAYRHLFAGCSEIIAIEEKRSRFAWHLSDCFQKDSGRPAFPNCDQKSAMINCLKKID 137
CWQNAY +L AGC E IA EEKR RFAW+LSDCF KDSGRPAFP C +S M++CLKK+D
Sbjct: 79 CWQNAYSYLLAGCKETIATEEKRKRFAWYLSDCFIKDSGRPAFPTCKDESVMMSCLKKLD 138
Query: 138 DEEHKIYLAFLLETNSICYQLQAHGFQYETERLVNELKKSADYTEHKLEIIEEKSDTLLQ 197
D EHKIYL FLLETN+IC QLQ++ F+ E ERLVNELK +A YTE KL+I+E KSD L+Q
Sbjct: 139 DHEHKIYLDFLLETNTICQQLQSNAFKNEIERLVNELKNTAQYTEDKLDILESKSDALIQ 198
Query: 198 SSNQIHDSLDSIDHRVQNVAQTAKGVRDLMDILSRHSEVVYNQSKEIAASQTELQEGQVR 257
+S+ IHDSL S+D RVQNVA + + LS+ + + + K IA SQ L++GQV+
Sbjct: 199 TSSMIHDSLGSLDVRVQNVASVTNTLETSVSGLSQQTVEISQEQKNIAESQLALRDGQVK 258
Query: 258 IKEKLDEGMATLIDAYSNLGKEVNNLRDEAIEIEKEISKAGDAMFSSMEQLQRKADNIGS 317
+KE L +GM +DAY+N+ + V+ L+ + +IE EIS G+ + + M LQ D+IG+
Sbjct: 259 MKETLKDGMDMFLDAYTNIQEGVDKLKSDTEQIEVEISVLGNNLSTKMIDLQSTTDDIGT 318
Query: 318 MAGDSLDKQQQLLHGQSTALESLQLLTKFQSEALAESRNTLQELAEYGHKQQEELLKRQE 377
SLDKQQ+LL GQ+ AL+ +Q LT+FQSEAL ESRNTLQ L E+ +QQE+L KRQE
Sbjct: 319 KTRSSLDKQQKLLDGQTVALDGIQFLTRFQSEALQESRNTLQRLKEFSQEQQEDLAKRQE 378
Query: 378 QLQEVHDHLFKNSRSILAAQEAFESKQASMFIALDKLFALHNAMLLESRMIKAFFIYSLS 437
+LQEVHDHLF+NS+S+L AQ AFE+KQA+MF+ALDKLFALHNAMLLESR+IKAF IY LS
Sbjct: 379 KLQEVHDHLFENSKSMLEAQVAFEAKQANMFVALDKLFALHNAMLLESRVIKAFVIYFLS 438
Query: 438 IFIIYMLTSTKQTYTVRPRLYIGLCLTFLIEVVTFRFTTYDIEQQTWIVSCDRSLFVLLA 497
IF+IYM TSTKQTY +RPRLYIGLC+T +EV + R+ D E+Q W+++ RSLF LLA
Sbjct: 439 IFVIYMFTSTKQTYIIRPRLYIGLCVTLALEVASLRYVN-DTERQAWMINLIRSLFALLA 497
Query: 498 AIQLLHSIFTYRDYEILNYQMLQTVLEKINGMERDKEELSW--DTNSEIDWSSWVDTDLQ 555
+ QLLH+ +YRDYE+LN+Q+L +++K+N M+ K+ELS+ DT SE+DW+SWVDTDL
Sbjct: 498 SAQLLHAALSYRDYEVLNHQILLRLVDKVNDMQ-SKKELSYDEDTESEVDWTSWVDTDLT 556
Query: 556 EEVDDYEDPNYIVPEEVGENWITTSSLATR-YDLRPR 591
++ D+ DP+Y +P + +N +TTSSL R Y+ RPR
Sbjct: 557 DDDDNLADPDYKIPLLIKDNPVTTSSLTRRLYNFRPR 593
>sp|I6V1W0|BMBL_DANRE Protein brambleberry OS=Danio rerio GN=bmb PE=2 SV=1
Length = 612
Score = 38.1 bits (87), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 98/248 (39%), Gaps = 29/248 (11%)
Query: 62 KQLVEDAKRRLIGSNACWQNAYRHLFAGCSEIIAIEEKRSRFAWHLSDCFQKDSGRPAFP 121
K L E + L ++C L A CS + EE+ ++ L +C + GR +P
Sbjct: 60 KFLAEAKQMELSPLDSCHFRVVAQLKATCSGLS--EEQLAKLGVALFNCQSEVEGRRTYP 117
Query: 122 NCDQKSAMINCLKKIDDEEHKIYLAFLLETNSICYQLQAHGFQYETERLVNELKKSA--- 178
C ++ ++ C +D + Y S+CY + F+ E VN L +A
Sbjct: 118 -CTEEMSIKECTADMDSDTWNAYHIVSNRARSVCYATRQQHFRKRAELTVNALISTATSQ 176
Query: 179 -----DYTEHKLEIIEEKS---DTLLQSSNQIH----------DSLD-SIDHRVQNVAQ- 218
D E + E+ + + D LL+ + + LD SI +Q +AQ
Sbjct: 177 LDAMKDLKEGQKELRDMTAASLDKLLEGHGALQIQQGALKEGQEQLDASISENLQRLAQE 236
Query: 219 ---TAKGVRDLMDILSRHSEVVYNQSKEIAASQTELQEGQVRIKEKLDEGMATLIDAYSN 275
+ G + + ++ ++ + N S ++ E+QEG I E L + D Y
Sbjct: 237 KALISTGQQLVAQLIQGITQRMENVSGQLKDQTAEVQEGHQAILEDLAVVRGSAQDIYEK 296
Query: 276 LGKEVNNL 283
+ +N
Sbjct: 297 MELNLNGF 304
>sp|P49022|PIP_LACLL Phage infection protein OS=Lactococcus lactis subsp. lactis GN=pip
PE=4 SV=1
Length = 901
Score = 34.7 bits (78), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 94/233 (40%), Gaps = 19/233 (8%)
Query: 186 EIIEEKSDTLLQSSNQIHDSLDSIDHRVQNVAQTAKGVRDLMDILSRHSEVVYNQSKEIA 245
E I S TLL++ N I +D +Q V D + + ++++ V
Sbjct: 167 EFINTASSTLLKTFNTIGYDIDKNMVSIQKVKSAILSTNDNLGTIDKYTQQV-------- 218
Query: 246 ASQTELQEGQVRIKEKLDEG--MATLIDAYSNLGKEVNNLRDEAIEIEKEISKAGDAMFS 303
+L IKEKL + T + +LG++V +L D+ EI+K +S +
Sbjct: 219 ---VDLHGKMPEIKEKLAKANEFITYLPEVDSLGQKVISLNDKMPEIDKSLSLVL-TLQE 274
Query: 304 SMEQLQRKADNIGSMAGDSLDKQQQLLHGQSTALESLQLLTKFQSEALAESRNTLQELAE 363
+ ++Q I + D + + G A + LQ++ + Q +S +Q+L +
Sbjct: 275 KIPEIQNAGKQISMIDEDFASVESTMTQGIQEAKDGLQIINQVQ-----KSMPDIQKLGQ 329
Query: 364 YGHKQQEELLKRQEQLQEVHDHLFKNSRSILAAQEAFESKQASMFIALDKLFA 416
L +++Q + + + L + + F +S+ +D+ A
Sbjct: 330 DADSLGTVTLDAAKKMQSALPSITNSVQITLQSIQEFSKNTSSVLAVIDQAIA 382
>sp|B2RPU2|PLHD1_MOUSE Pleckstrin homology domain-containing family D member 1 OS=Mus
musculus GN=Plekhd1 PE=2 SV=1
Length = 505
Score = 33.9 bits (76), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 113 KDSGRPAFPNCDQKSAMINCLK----KIDDEEHKIYLAFLLETNSICYQ----------- 157
++SG+ + N AMI L+ ++ E+ + + ET +C Q
Sbjct: 132 QESGKVTWKNAQLGEAMIKSLEAQGLQLAKEKQEYLDKLMEETEELCLQREQREELERLN 191
Query: 158 --LQAHGFQYETERLVNELKKSADYTEHKLEIIEEKSDTLLQSSNQIHDSLDSIDHRVQN 215
L+A Q+E +V EL+ + + +LE+ + Q ++ +S+ H ++
Sbjct: 192 QVLEAEKQQFEE--VVQELRVEQEQIKRELELTARCLKGVEQEKKELRHLTESLQHTLEE 249
Query: 216 VAQTAKGVRDLMDILSRHSEVVYNQSKEIAASQTELQEGQVRIKEKLDEGMATLIDAYSN 275
++ K ++++ + + NQS++ AS L +I+E++ E +A + A
Sbjct: 250 LSIEKKKTLEMLEEDKNQPQPLTNQSEQPPASDG-LHSNLRQIEERMQELLAEKLLAEKR 308
Query: 276 LGKEVNNLRDEAIEIEKEI-SKAGDAMFSSMEQL 308
+ + N R A+E E+E S A+ +S+++L
Sbjct: 309 MKE--NEERSRALEEEREFYSSQSQALQNSLQEL 340
>sp|B1WBU8|PLHD1_RAT Pleckstrin homology domain-containing family D member 1 OS=Rattus
norvegicus GN=Plekhd1 PE=2 SV=1
Length = 505
Score = 33.5 bits (75), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 113 KDSGRPAFPNCDQKSAMINCLK----KIDDEEHKIYLAFLLETNSICYQ----------- 157
++SG+ + N AMI L+ ++ E+ + + ET +C Q
Sbjct: 132 QESGKVTWKNAQLGEAMIKSLEAQGLQLAKEKQEYLDKLMEETEELCLQREQREELERLN 191
Query: 158 --LQAHGFQYETERLVNELKKSADYTEHKLEIIEEKSDTLLQSSNQIHDSLDSIDHRVQN 215
L+A Q+E +V ELK + + +LE+ + Q ++ +S+ H ++
Sbjct: 192 QVLEAEKQQFEE--VVQELKVEQEQIKRELELTARCLKGVEQEKKELRHLTESLQHTLEE 249
Query: 216 VAQTAKGVRDLMDILSRHSEVVYNQSKEIAASQTELQEGQVRIKEKLDEGMATLIDAYSN 275
++ K ++++ + + NQS++ A+ L +I+E++ E +A + A
Sbjct: 250 LSIEKKKTLEMLEEDKNQPQPLTNQSEQPPATDG-LHSNLRQIEERMQELLAEKLLAEKR 308
Query: 276 LGKEVNNLRDEAIEIEKEI-SKAGDAMFSSMEQL 308
+ + N R A+E E+E S A+ +S+++L
Sbjct: 309 MKE--NEERSRALEEEREFYSSQSQALQNSLQEL 340
>sp|Q5HFY8|EBH_STAAC Extracellular matrix-binding protein ebh OS=Staphylococcus aureus
(strain COL) GN=ebh PE=4 SV=1
Length = 10498
Score = 33.1 bits (74), Expect = 6.7, Method: Composition-based stats.
Identities = 64/329 (19%), Positives = 148/329 (44%), Gaps = 33/329 (10%)
Query: 55 GLHNEKGKQLVEDAKRRLIGS-NACWQNAYRHLFAGCS---EIIAIEEKRSRFAWHLSDC 110
+HN G Q ++DAK + I S N N + + A + + + + K A + +
Sbjct: 9514 AIHNLNGDQRLQDAKDKAIQSINQALANKLKEIEASNATDQDKLIAKNKAEELANSIINN 9573
Query: 111 FQKDSGRPAFPNCDQKSAMINCLKKIDDEEHKIYLAFLLETNSICYQLQAHGFQYETERL 170
K + A ++A + ++++ E I A + + Q+QA L
Sbjct: 9574 INKATSNQAVSQV--QTAGNHAIEQVHANE--IPKAKIDANKDVDKQVQA---------L 9620
Query: 171 VNELKKSADYTEHKLEIIEEKSDTLLQSSNQIHDSLDSIDHRVQNVAQTAKGVRDLMDIL 230
++E+ ++ + T+ + + ++++ + +LQ + ++ + + Q AQ A+ ++D+ D++
Sbjct: 9621 IDEIDRNPNLTDKEKQALKDRINQILQQGHNGINNAMTKEEIEQAKAQLAQALQDIKDLV 9680
Query: 231 SRHSEVVYNQSKEIAASQTELQEGQVRIKEKLDEGMATLIDAYSNLG-KEVNN-LRDEAI 288
+ + K++ A E+ + + +K + + I+ G ++NN + EAI
Sbjct: 9681 KAKEDAKQDVDKQVQALIDEIDQNP-NLTDKEKQALKDRINQILQQGHNDINNAMTKEAI 9739
Query: 289 EIEKEISKAGDAMFSSMEQLQRKADNIGSMAGDSLDKQQQLLHGQSTALESLQLLTKFQS 348
E KE + A+ + ++ K D A + +DK+ Q L + ++ LT +
Sbjct: 9740 EQAKE--RLAQALQDIKDLVKAKED-----AKNDIDKRVQALIDE---IDQNPNLTDKEK 9789
Query: 349 EALAESRNTLQELAEYGHKQQEELLKRQE 377
+AL ++ + ++ + GH L ++E
Sbjct: 9790 QAL---KDRINQILQQGHNDINNALTKEE 9815
>sp|Q2FYJ6|EBH_STAA8 Extracellular matrix-binding protein ebh OS=Staphylococcus aureus
(strain NCTC 8325) GN=ebh PE=1 SV=1
Length = 9535
Score = 33.1 bits (74), Expect = 6.9, Method: Composition-based stats.
Identities = 64/329 (19%), Positives = 148/329 (44%), Gaps = 33/329 (10%)
Query: 55 GLHNEKGKQLVEDAKRRLIGS-NACWQNAYRHLFAGCS---EIIAIEEKRSRFAWHLSDC 110
+HN G Q ++DAK + I S N N + + A + + + + K A + +
Sbjct: 8551 AIHNLNGDQRLQDAKDKAIQSINQALANKLKEIEASNATDQDKLIAKNKAEELANSIINN 8610
Query: 111 FQKDSGRPAFPNCDQKSAMINCLKKIDDEEHKIYLAFLLETNSICYQLQAHGFQYETERL 170
K + A ++A + ++++ E I A + + Q+QA L
Sbjct: 8611 INKATSNQAVSQV--QTAGNHAIEQVHANE--IPKAKIDANKDVDKQVQA---------L 8657
Query: 171 VNELKKSADYTEHKLEIIEEKSDTLLQSSNQIHDSLDSIDHRVQNVAQTAKGVRDLMDIL 230
++E+ ++ + T+ + + ++++ + +LQ + ++ + + Q AQ A+ ++D+ D++
Sbjct: 8658 IDEIDRNPNLTDKEKQALKDRINQILQQGHNGINNAMTKEEIEQAKAQLAQALQDIKDLV 8717
Query: 231 SRHSEVVYNQSKEIAASQTELQEGQVRIKEKLDEGMATLIDAYSNLG-KEVNN-LRDEAI 288
+ + K++ A E+ + + +K + + I+ G ++NN + EAI
Sbjct: 8718 KAKEDAKQDVDKQVQALIDEIDQNP-NLTDKEKQALKDRINQILQQGHNDINNAMTKEAI 8776
Query: 289 EIEKEISKAGDAMFSSMEQLQRKADNIGSMAGDSLDKQQQLLHGQSTALESLQLLTKFQS 348
E KE + A+ + ++ K D A + +DK+ Q L + ++ LT +
Sbjct: 8777 EQAKE--RLAQALQDIKDLVKAKED-----AKNDIDKRVQALIDE---IDQNPNLTDKEK 8826
Query: 349 EALAESRNTLQELAEYGHKQQEELLKRQE 377
+AL ++ + ++ + GH L ++E
Sbjct: 8827 QAL---KDRINQILQQGHNDINNALTKEE 8852
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 204,905,729
Number of Sequences: 539616
Number of extensions: 8365564
Number of successful extensions: 40083
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 1246
Number of HSP's that attempted gapping in prelim test: 36881
Number of HSP's gapped (non-prelim): 3743
length of query: 593
length of database: 191,569,459
effective HSP length: 123
effective length of query: 470
effective length of database: 125,196,691
effective search space: 58842444770
effective search space used: 58842444770
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)