Query 007691
Match_columns 593
No_of_seqs 94 out of 96
Neff 4.4
Searched_HMMs 13730
Date Mon Mar 25 08:05:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007691.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/007691hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2efla1 a.238.1.4 (A:1-288) Fo 35.2 1.3E+02 0.0098 25.9 29.6 77 220-296 73-150 (288)
2 d1bg1a1 a.47.1.1 (A:136-321) S 29.2 59 0.0043 28.9 7.2 24 273-296 6-29 (186)
3 d1gs9a_ a.24.1.1 (A:) Apolipop 22.6 1.9E+02 0.014 23.5 10.6 14 172-185 17-30 (144)
4 d2jm5a1 a.91.1.1 (A:3-134) Reg 20.3 1.3E+02 0.0096 23.7 7.3 102 56-164 17-125 (132)
5 d2efka1 a.238.1.4 (A:10-288) C 20.0 2.5E+02 0.018 23.9 31.7 133 164-296 6-141 (279)
6 d1szia_ a.24.23.1 (A:) Mannose 17.7 3.1E+02 0.023 24.8 9.9 27 287-316 118-144 (226)
7 d1owaa_ a.7.1.1 (A:) Spectrin 17.5 2.2E+02 0.016 22.4 9.5 52 176-228 19-70 (156)
8 d1eq1a_ a.63.1.1 (A:) Apolipop 16.8 1.3E+02 0.0095 26.1 6.8 36 172-207 41-77 (166)
9 d1fioa_ a.47.2.1 (A:) Sso1 {Ba 16.4 2.6E+02 0.019 22.6 17.0 32 301-332 93-124 (196)
10 d1t98a2 a.47.6.1 (A:119-281) C 12.6 4E+02 0.029 22.9 11.2 66 208-273 52-122 (163)
No 1
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.17 E-value=1.3e+02 Score=25.90 Aligned_cols=77 Identities=9% Similarity=-0.021 Sum_probs=45.2
Q ss_pred hhhHHHHHHHhhhhhHHHHhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh
Q 007691 220 AKGVRDLMDILSRHSEVVYNQS-KEIAASQTELQEGQVRIKEKLDEGMATLIDAYSNLGKEVNNLRDEAIEIEKEISK 296 (593)
Q Consensus 220 ~k~v~~~i~~l~~~s~~i~Eq~-~eIa~sQ~eL~e~q~~m~~~l~~g~a~~~esy~~l~~~~ekl~~~t~~i~~ei~~ 296 (593)
+..+...++.+...+..+-+.. .+|..-...+...+.+.+.++.+.+..+...+....+++++.+..-....++...
T Consensus 73 ~~~~~~~~~~~a~~h~~~a~~l~~~i~~~l~~~~~~~~~~~K~~~~~~~k~~k~~~~~~~~l~k~k~~Y~~~~~e~e~ 150 (288)
T d2efla1 73 FISNLNEMNDYAGQHEVISENMASQIIVDLARYVQELKQERKSNFHDGRKAQQHIETCWKQLESSKRRFERDCKEADR 150 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444444 2355555556666666667777777777777777777777777765555554444
No 2
>d1bg1a1 a.47.1.1 (A:136-321) STAT3b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=29.22 E-value=59 Score=28.90 Aligned_cols=24 Identities=13% Similarity=0.340 Sum_probs=16.2
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHh
Q 007691 273 YSNLGKEVNNLRDEAIEIEKEISK 296 (593)
Q Consensus 273 y~~l~~~~ekl~~~t~~i~~ei~~ 296 (593)
.+.+.+.++.++..+.+++.+|+.
T Consensus 6 q~ei~~~v~~l~~~~q~~e~~ik~ 29 (186)
T d1bg1a1 6 QQMLEQHLQDVRKRVQDLEQKMKV 29 (186)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556667777777777777775
No 3
>d1gs9a_ a.24.1.1 (A:) Apolipoprotein E {Human (Homo sapiens), E4 [TaxId: 9606]}
Probab=22.57 E-value=1.9e+02 Score=23.53 Aligned_cols=14 Identities=7% Similarity=0.162 Sum_probs=6.6
Q ss_pred HHHHHhHHHHHHHH
Q 007691 172 NELKKSADYTEHKL 185 (593)
Q Consensus 172 nkL~~sS~~a~~~L 185 (593)
++|...+..+.+.|
T Consensus 17 ~~l~~~a~~~~~~l 30 (144)
T d1gs9a_ 17 RWVQTLSEQVQEEL 30 (144)
T ss_dssp HHHHHCCHHHHHHH
T ss_pred HHHHHhHHHHHHHH
Confidence 34444444444444
No 4
>d2jm5a1 a.91.1.1 (A:3-134) Regulator of G-protein signaling 18, RGS18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.29 E-value=1.3e+02 Score=23.72 Aligned_cols=102 Identities=10% Similarity=0.047 Sum_probs=58.7
Q ss_pred cCchhhhHHHHHHHHh--cCCCCchHHHHHHHHhccchhhhhcHHHHHHHHHHhhcchhhhcCCCCCCCCCCc--ccHhH
Q 007691 56 LHNEKGKQLVEDAKRR--LIGSNACWQNAYRHLFAGCSEIIAIEEKRSRFAWHLSDCFQKDSGRPAFPNCDQK--SAMIN 131 (593)
Q Consensus 56 ~~~~rG~k~le~a~~k--l~~~~~CW~~Al~~L~~~C~~L~~~de~qSrLAl~LtNC~le~SGR~~fp~C~~~--~si~~ 131 (593)
++|+.|..++.+...+ -...=.||.. +..++.. .++.++...|..+.++|+..+.-... +++.. ..+.+
T Consensus 17 L~d~~~~~~F~~fl~~~~~~e~l~Fw~~-ve~~k~~-----~~~~~~~~~a~~Iy~~yi~~~s~~~i-~~~~~~~~~i~~ 89 (132)
T d2jm5a1 17 LSHRDGLEAFTRFLKTEFSEENIEFWIA-CEDFKKS-----KGPQQIHLKAKAIYEKFIQTDAPKEV-NLDFHTKEVITN 89 (132)
T ss_dssp HHSHHHHHHHHHHHHHTTCTTTHHHHHH-HHHHHTC-----CCHHHHHHHHHHHHHHTTCSSSSSCC-CCCHHHHHHHHH
T ss_pred HcChHHHHHHHHHHhHcCCHHHHHHHHH-HHHHHcc-----CCHHHHHHHHHHHHHHHhCCCCCCCC-CCCHHHHHHHHH
Confidence 5688899887776443 2245578854 4566542 25567888999999999987544322 23322 23555
Q ss_pred hhhcCChHHH-HHHHHHHHhHHHHHH--HHHhhhhH
Q 007691 132 CLKKIDDEEH-KIYLAFLLETNSICY--QLQAHGFQ 164 (593)
Q Consensus 132 Ct~~Mdd~af-~vY~eF~~ht~sIC~--~Lq~q~fq 164 (593)
+..+-+++.| .+....+..-..-|| |+++..|.
T Consensus 90 ~~~~~~~~~F~~aq~~V~~~l~~~~yp~Fl~S~~y~ 125 (132)
T d2jm5a1 90 SITQPTLHSFDAAQSRVYQLMEQDSYTRFLKSDIYL 125 (132)
T ss_dssp HTTSCCTTTTHHHHHHHHHHHHHHHHHHHHTSHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHHHHhhhhhhhccCHHHH
Confidence 6555555444 344444444444444 44454444
No 5
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.04 E-value=2.5e+02 Score=23.93 Aligned_cols=133 Identities=11% Similarity=0.039 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhHHHHhhhhhhhcchhhhHHH--HHHHHHhhhhHHHHHHHhhhhhHHHHhhh
Q 007691 164 QYETERLVNELKKSADYTEHKLEIIEEKSDTLLQSSNQIHDSLDSIDHR--VQNVAQTAKGVRDLMDILSRHSEVVYNQS 241 (593)
Q Consensus 164 q~~TE~tVnkL~~sS~~a~~~Le~l~e~qe~Ll~~~~~~~dsL~s~~~Q--~~~laet~k~v~~~i~~l~~~s~~i~Eq~ 241 (593)
..+++.-++-|-+-.....++-..=.+.+..|..-.+...+........ .-.+..+++.+...++.+.+.+..+.+..
T Consensus 6 ~~~~~~g~~~~~~~~~~~~eRa~iE~~Yak~L~kL~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~a~~~~~~~~~l 85 (279)
T d2efka1 6 ERHTQWGLDLLDRYVKFVKERTEVEQAYAKQLRSLVKKYLPKRPAKDDPESKFSQQQSFVQILQEVNDFAGQRELVAENL 85 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC-------CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555554444444444444443444444444333222110000000 01133344555555555555555555544
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh
Q 007691 242 KE-IAASQTELQEGQVRIKEKLDEGMATLIDAYSNLGKEVNNLRDEAIEIEKEISK 296 (593)
Q Consensus 242 ~e-Ia~sQ~eL~e~q~~m~~~l~~g~a~~~esy~~l~~~~ekl~~~t~~i~~ei~~ 296 (593)
.. |...-..+...+...+.++.+.+..+...+......+++.+..-....+++.+
T Consensus 86 ~~~i~~~l~~~~~~~~~~~k~~~~~~~~~~k~l~~~~~~~~k~k~~y~~~~~e~e~ 141 (279)
T d2efka1 86 SVRVCLELTKYSQEMKQERKMHFQEGRRAQQQLENGFKQLENSKRKFERDCREAEK 141 (279)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 55556666777777777778888888888877777777777765555555544
No 6
>d1szia_ a.24.23.1 (A:) Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=17.74 E-value=3.1e+02 Score=24.80 Aligned_cols=27 Identities=19% Similarity=0.165 Sum_probs=16.1
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhhhh
Q 007691 287 AIEIEKEISKAGDAMFSSMEQLQRKADNIG 316 (593)
Q Consensus 287 t~~i~~ei~~~g~~l~~~m~~lq~~a~~I~ 316 (593)
+..+|.+.-.+..+|+ +.||+++..++
T Consensus 118 ~e~vEsrtL~~ar~Lt---qQLqstc~~L~ 144 (226)
T d1szia_ 118 PEQVEARALSMFRDIT---QQLQSMCVALG 144 (226)
T ss_dssp SHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 3445565555555554 56777777754
No 7
>d1owaa_ a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.49 E-value=2.2e+02 Score=22.36 Aligned_cols=52 Identities=8% Similarity=0.120 Sum_probs=32.8
Q ss_pred HhHHHHHHHHHHHHHHhHHHHhhhhhhhcchhhhHHHHHHHHHhhhhHHHHHH
Q 007691 176 KSADYTEHKLEIIEEKSDTLLQSSNQIHDSLDSIDHRVQNVAQTAKGVRDLMD 228 (593)
Q Consensus 176 ~sS~~a~~~Le~l~e~qe~Ll~~~~~~~dsL~s~~~Q~~~laet~k~v~~~i~ 228 (593)
+++..+.++++.+.+.-+.|...+.+-+..|.... +..++.+..+.+..-|.
T Consensus 19 e~~~~i~~~~~~l~~rw~~L~~~~~~R~~~Le~~~-~~~~F~~~~~~l~~Wl~ 70 (156)
T d1owaa_ 19 ETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSY-HLQVFKRDADDLGKWIM 70 (156)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCSCH-HHHHHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 45666777888888888888777766666665332 23455555555555554
No 8
>d1eq1a_ a.63.1.1 (A:) Apolipophorin-III {Manduca sexta [TaxId: 7130]}
Probab=16.85 E-value=1.3e+02 Score=26.11 Aligned_cols=36 Identities=14% Similarity=0.299 Sum_probs=21.2
Q ss_pred HHHHHhHHHHHHHHHHHHH-HhHHHHhhhhhhhcchh
Q 007691 172 NELKKSADYTEHKLEIIEE-KSDTLLQSSNQIHDSLD 207 (593)
Q Consensus 172 nkL~~sS~~a~~~Le~l~e-~qe~Ll~~~~~~~dsL~ 207 (593)
..+.+++..+.+.+....+ -+..+.+..+++.|.++
T Consensus 41 ~a~ke~a~~v~e~~~~~~~~l~~~~~Ea~~~a~dav~ 77 (166)
T d1eq1a_ 41 KALKDGSDSVLQQLSAFSSSLQGAISDANGKAKEALE 77 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSSTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566666666666665544 35555666666555443
No 9
>d1fioa_ a.47.2.1 (A:) Sso1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=16.37 E-value=2.6e+02 Score=22.57 Aligned_cols=32 Identities=6% Similarity=0.140 Sum_probs=13.3
Q ss_pred hhhhhHHHHHHHhhhhhhhhcchHHHHHHhhc
Q 007691 301 MFSSMEQLQRKADNIGSMAGDSLDKQQQLLHG 332 (593)
Q Consensus 301 l~~~m~~lq~~a~~I~~~~~~SLenQ~~LL~g 332 (593)
+...|+.++.............+..+.....+
T Consensus 93 l~~~~~~f~~~q~~~~~~~k~~~~r~~~~~~~ 124 (196)
T d1fioa_ 93 FLKLIQDYRIVDSNYKEENKEQAKRQYMIIQP 124 (196)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 33344444444343333333444444444433
No 10
>d1t98a2 a.47.6.1 (A:119-281) Chromosome partition protein MukF (KicB), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=12.57 E-value=4e+02 Score=22.85 Aligned_cols=66 Identities=21% Similarity=0.216 Sum_probs=30.3
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHhhhh--hHHHH---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007691 208 SIDHRVQNVAQTAKGVRDLMDILSRH--SEVVY---NQSKEIAASQTELQEGQVRIKEKLDEGMATLIDAY 273 (593)
Q Consensus 208 s~~~Q~~~laet~k~v~~~i~~l~~~--s~~i~---Eq~~eIa~sQ~eL~e~q~~m~~~l~~g~a~~~esy 273 (593)
+++..|.-.-+.+..|+..|..++.. ..+|. ....|.+..-+||++--..-.+++.+++-+|+++.
T Consensus 52 ~Idl~QR~mDeQQ~~Vk~eIA~LL~qdW~~AI~~Ce~LL~eTs~tLRELqdtL~aagd~lqa~Ll~IQ~a~ 122 (163)
T d1t98a2 52 SIDLTQRLMDEQQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLRELQDTLEAAGDKLQANLLRIQDAT 122 (163)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 44444433444444555555443332 11111 13344555555555555555555666555555444
Done!