Query 007694
Match_columns 593
No_of_seqs 306 out of 3813
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 08:10:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007694.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007694hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3org_A CMCLC; transporter, tra 100.0 5.4E-76 1.9E-80 657.4 32.7 497 2-572 79-628 (632)
2 1ots_A Voltage-gated CLC-type 100.0 2E-61 6.9E-66 519.1 37.5 343 2-368 106-449 (465)
3 4ene_A CLC-EC1, H(+)/CL(-) exc 100.0 6.6E-61 2.3E-65 512.0 38.2 335 2-357 91-426 (446)
4 3nd0_A SLL0855 protein; CLC fa 100.0 3.3E-61 1.1E-65 515.4 35.7 340 2-368 102-441 (466)
5 3org_A CMCLC; transporter, tra 99.8 1.7E-20 5.7E-25 209.4 17.1 192 155-355 9-211 (632)
6 3lv9_A Putative transporter; C 99.7 3.4E-17 1.2E-21 148.3 13.4 126 413-570 18-146 (148)
7 2ef7_A Hypothetical protein ST 99.7 3.7E-17 1.3E-21 145.1 13.4 128 416-573 2-129 (133)
8 4esy_A CBS domain containing m 99.7 1.1E-17 3.7E-22 155.5 10.3 138 413-568 13-161 (170)
9 3kpb_A Uncharacterized protein 99.7 3E-17 1E-21 143.2 12.2 119 419-569 2-120 (122)
10 3lqn_A CBS domain protein; csg 99.7 5.2E-17 1.8E-21 147.3 13.7 137 413-574 10-148 (150)
11 1ots_A Voltage-gated CLC-type 99.7 7.6E-17 2.6E-21 172.9 17.0 188 154-356 33-233 (465)
12 2o16_A Acetoin utilization pro 99.7 5.9E-17 2E-21 148.9 14.0 139 417-576 4-142 (160)
13 3fv6_A YQZB protein; CBS domai 99.7 7.2E-17 2.5E-21 148.1 14.4 134 412-574 11-149 (159)
14 3hf7_A Uncharacterized CBS-dom 99.7 4.3E-17 1.5E-21 144.4 12.2 124 418-570 2-128 (130)
15 3i8n_A Uncharacterized protein 99.7 2.9E-17 1E-21 145.3 10.4 123 415-568 3-128 (130)
16 3nqr_A Magnesium and cobalt ef 99.7 2.1E-17 7.1E-22 145.7 9.2 121 417-568 2-125 (127)
17 3gby_A Uncharacterized protein 99.7 3E-17 1E-21 144.8 9.8 124 416-569 3-126 (128)
18 3nd0_A SLL0855 protein; CLC fa 99.7 2.2E-16 7.6E-21 168.7 18.3 187 154-356 29-228 (466)
19 4ene_A CLC-EC1, H(+)/CL(-) exc 99.7 4.7E-16 1.6E-20 165.8 20.6 187 154-356 18-218 (446)
20 3lhh_A CBS domain protein; str 99.7 7.8E-17 2.7E-21 150.0 12.6 127 413-571 37-166 (172)
21 3jtf_A Magnesium and cobalt ef 99.7 3.5E-17 1.2E-21 144.7 9.5 122 416-570 3-127 (129)
22 3k6e_A CBS domain protein; str 99.7 8.7E-17 3E-21 147.2 12.3 134 415-574 12-147 (156)
23 3oco_A Hemolysin-like protein 99.7 1.3E-16 4.3E-21 145.5 13.3 129 412-572 14-146 (153)
24 3lfr_A Putative metal ION tran 99.7 2.7E-17 9.3E-22 146.8 8.6 126 417-572 2-130 (136)
25 2p9m_A Hypothetical protein MJ 99.7 1E-16 3.4E-21 143.1 11.8 127 414-569 4-136 (138)
26 1pbj_A Hypothetical protein; s 99.7 2.4E-16 8.1E-21 138.0 13.8 122 418-569 1-122 (125)
27 2rih_A Conserved protein with 99.7 3.2E-16 1.1E-20 140.5 14.1 123 417-569 4-128 (141)
28 2yzi_A Hypothetical protein PH 99.7 1.7E-16 5.9E-21 141.6 11.6 127 415-571 4-131 (138)
29 3ctu_A CBS domain protein; str 99.7 2.6E-16 9E-21 143.7 13.0 138 413-576 10-149 (156)
30 4gqw_A CBS domain-containing p 99.7 1.2E-16 4.1E-21 144.8 9.9 140 416-572 3-146 (152)
31 1o50_A CBS domain-containing p 99.7 2.9E-16 1E-20 143.7 12.2 138 414-570 12-154 (157)
32 1y5h_A Hypothetical protein RV 99.7 1.3E-16 4.5E-21 141.4 9.7 127 414-569 4-131 (133)
33 3fhm_A Uncharacterized protein 99.7 1.7E-16 6E-21 146.5 10.6 132 413-572 19-153 (165)
34 3k2v_A Putative D-arabinose 5- 99.7 2.8E-16 9.7E-21 142.4 11.7 120 417-565 27-148 (149)
35 3sl7_A CBS domain-containing p 99.7 3.4E-16 1.1E-20 146.3 12.2 140 417-573 3-160 (180)
36 1pvm_A Conserved hypothetical 99.7 5.1E-16 1.7E-20 146.1 13.2 128 418-572 9-137 (184)
37 2rc3_A CBS domain; in SITU pro 99.7 9.1E-16 3.1E-20 136.4 13.8 123 419-570 7-132 (135)
38 3kxr_A Magnesium transporter, 99.7 5.7E-16 2E-20 148.3 13.4 126 414-573 50-178 (205)
39 2d4z_A Chloride channel protei 99.6 5.6E-16 1.9E-20 152.4 12.1 147 415-570 10-247 (250)
40 1yav_A Hypothetical protein BS 99.6 6.5E-16 2.2E-20 141.6 11.5 136 414-574 10-147 (159)
41 2uv4_A 5'-AMP-activated protei 99.6 1.7E-15 5.9E-20 137.7 13.6 130 411-569 16-151 (152)
42 2pfi_A Chloride channel protei 99.6 1.4E-15 4.8E-20 139.7 13.1 139 415-572 10-150 (164)
43 2nyc_A Nuclear protein SNF4; b 99.6 1.8E-15 6.3E-20 135.7 13.6 133 416-569 6-141 (144)
44 3ocm_A Putative membrane prote 99.6 9.3E-16 3.2E-20 142.9 11.6 127 412-571 30-159 (173)
45 2emq_A Hypothetical conserved 99.6 7.9E-16 2.7E-20 140.5 10.8 134 414-572 7-142 (157)
46 3oi8_A Uncharacterized protein 99.6 6.3E-16 2.2E-20 141.4 8.8 120 413-564 33-155 (156)
47 2j9l_A Chloride channel protei 99.6 3.2E-15 1.1E-19 140.3 12.7 142 413-572 6-168 (185)
48 4fry_A Putative signal-transdu 99.6 4.2E-15 1.4E-19 135.8 12.8 125 418-571 7-137 (157)
49 2oux_A Magnesium transporter; 99.6 7.6E-15 2.6E-19 148.0 11.9 125 415-573 134-263 (286)
50 1vr9_A CBS domain protein/ACT 99.6 1.2E-14 4.1E-19 140.1 11.3 121 416-570 11-131 (213)
51 3l2b_A Probable manganase-depe 99.6 1.6E-14 5.4E-19 142.3 12.4 136 417-569 6-244 (245)
52 3ddj_A CBS domain-containing p 99.5 2.8E-14 9.5E-19 144.5 13.6 136 417-574 155-290 (296)
53 2yvy_A MGTE, Mg2+ transporter 99.5 2.5E-14 8.7E-19 143.6 12.7 125 414-572 131-260 (278)
54 3t4n_C Nuclear protein SNF4; C 99.5 6.5E-14 2.2E-18 143.6 12.4 132 417-569 186-320 (323)
55 2zy9_A Mg2+ transporter MGTE; 99.5 7.9E-14 2.7E-18 150.1 13.1 126 413-572 150-280 (473)
56 3ddj_A CBS domain-containing p 99.5 1.1E-13 3.9E-18 139.9 13.2 127 416-572 91-217 (296)
57 3pc3_A CG1753, isoform A; CBS, 99.5 1.1E-13 3.7E-18 151.5 11.6 132 413-570 379-512 (527)
58 3kh5_A Protein MJ1225; AMPK, A 99.5 5.3E-14 1.8E-18 140.8 7.4 132 418-567 148-279 (280)
59 3kh5_A Protein MJ1225; AMPK, A 99.4 5.6E-13 1.9E-17 133.3 14.0 123 417-569 83-205 (280)
60 2yzq_A Putative uncharacterize 99.4 7.6E-14 2.6E-18 140.0 7.5 135 417-568 125-278 (282)
61 2qrd_G Protein C1556.08C; AMPK 99.4 8.4E-13 2.9E-17 135.9 14.0 133 417-570 181-316 (334)
62 3usb_A Inosine-5'-monophosphat 99.4 2.4E-12 8E-17 139.4 12.9 121 416-569 111-234 (511)
63 2v8q_E 5'-AMP-activated protei 99.3 4.8E-12 1.6E-16 130.0 13.2 143 412-570 29-178 (330)
64 2v8q_E 5'-AMP-activated protei 99.3 1.5E-12 5.3E-17 133.7 9.4 131 419-570 191-324 (330)
65 2yzq_A Putative uncharacterize 99.3 3.4E-12 1.2E-16 127.9 11.2 121 416-564 58-179 (282)
66 3t4n_C Nuclear protein SNF4; C 99.3 9E-12 3.1E-16 127.5 13.8 128 418-570 114-249 (323)
67 4fxs_A Inosine-5'-monophosphat 99.3 1.4E-12 4.9E-17 140.6 6.5 119 418-568 89-208 (496)
68 1zfj_A Inosine monophosphate d 99.3 1.6E-11 5.6E-16 133.1 14.5 120 417-569 89-211 (491)
69 1me8_A Inosine-5'-monophosphat 99.3 6.1E-13 2.1E-17 144.2 1.4 129 412-570 90-222 (503)
70 4avf_A Inosine-5'-monophosphat 99.2 1.5E-12 5.2E-17 140.3 1.9 120 415-568 85-206 (490)
71 1vrd_A Inosine-5'-monophosphat 99.2 1.9E-12 6.6E-17 140.5 1.4 121 417-570 94-216 (494)
72 4af0_A Inosine-5'-monophosphat 99.2 2.5E-12 8.7E-17 135.3 1.9 114 421-568 141-257 (556)
73 2qrd_G Protein C1556.08C; AMPK 99.2 1.4E-10 5E-15 119.1 12.9 124 421-569 110-243 (334)
74 1jcn_A Inosine monophosphate d 99.0 5.3E-12 1.8E-16 137.6 -5.1 120 418-568 108-232 (514)
75 2cu0_A Inosine-5'-monophosphat 99.0 4.5E-11 1.5E-15 129.2 1.2 115 418-568 93-207 (486)
76 3ghd_A A cystathionine beta-sy 98.6 1.7E-07 5.9E-12 72.6 7.9 66 428-504 2-67 (70)
77 1vr9_A CBS domain protein/ACT 98.5 2.2E-07 7.7E-12 88.9 7.6 102 417-542 71-172 (213)
78 3ghd_A A cystathionine beta-sy 98.4 3.8E-07 1.3E-11 70.6 6.2 46 513-567 2-47 (70)
79 3fio_A A cystathionine beta-sy 98.4 1E-06 3.5E-11 67.9 7.9 66 428-504 2-67 (70)
80 4esy_A CBS domain containing m 98.3 3E-07 1E-11 84.5 4.8 57 493-566 17-73 (170)
81 2d4z_A Chloride channel protei 98.3 1.1E-06 3.8E-11 86.0 7.3 66 493-573 12-77 (250)
82 3lv9_A Putative transporter; C 98.2 2.3E-06 7.7E-11 76.5 7.2 62 492-570 21-85 (148)
83 3l2b_A Probable manganase-depe 98.2 1.2E-06 4E-11 85.6 5.1 60 493-569 6-65 (245)
84 3lhh_A CBS domain protein; str 98.1 2E-06 7E-11 79.1 5.9 61 493-568 41-102 (172)
85 3kpb_A Uncharacterized protein 98.1 2.5E-06 8.6E-11 73.2 5.8 58 495-569 2-59 (122)
86 3k6e_A CBS domain protein; str 98.1 3.2E-06 1.1E-10 76.5 6.2 61 494-569 15-75 (156)
87 3k2v_A Putative D-arabinose 5- 98.1 4.4E-06 1.5E-10 74.7 6.8 58 494-568 28-87 (149)
88 3fio_A A cystathionine beta-sy 98.1 5.3E-06 1.8E-10 63.7 6.2 47 513-568 2-48 (70)
89 2rih_A Conserved protein with 98.0 7.3E-06 2.5E-10 72.4 7.0 58 494-568 5-64 (141)
90 3nqr_A Magnesium and cobalt ef 98.0 2.6E-06 8.9E-11 74.0 3.8 59 494-567 3-62 (127)
91 2o16_A Acetoin utilization pro 98.0 6.8E-06 2.3E-10 74.5 6.6 59 494-569 5-63 (160)
92 3i8n_A Uncharacterized protein 98.0 3.7E-06 1.3E-10 73.3 4.6 61 493-568 5-66 (130)
93 3jtf_A Magnesium and cobalt ef 98.0 3.5E-06 1.2E-10 73.4 4.2 61 493-568 4-65 (129)
94 2yzi_A Hypothetical protein PH 98.0 9.6E-06 3.3E-10 71.2 6.7 56 493-565 6-61 (138)
95 3fhm_A Uncharacterized protein 98.0 1.1E-05 3.7E-10 73.5 6.7 65 492-570 22-86 (165)
96 3ctu_A CBS domain protein; str 98.0 9E-06 3.1E-10 73.2 6.1 62 493-569 14-75 (156)
97 1yav_A Hypothetical protein BS 97.9 8.9E-06 3E-10 73.5 6.0 59 493-568 13-73 (159)
98 3lqn_A CBS domain protein; csg 97.9 7.1E-06 2.4E-10 73.3 5.3 61 493-568 14-74 (150)
99 2p9m_A Hypothetical protein MJ 97.9 9.5E-06 3.3E-10 71.2 6.0 59 493-568 7-66 (138)
100 3lfr_A Putative metal ION tran 97.9 4.7E-06 1.6E-10 73.3 4.0 60 494-568 3-63 (136)
101 1pbj_A Hypothetical protein; s 97.9 1.6E-05 5.3E-10 68.4 6.8 60 416-476 63-122 (125)
102 3gby_A Uncharacterized protein 97.9 8.8E-06 3E-10 70.6 5.1 59 418-476 68-126 (128)
103 3hf7_A Uncharacterized CBS-dom 97.9 2.5E-05 8.5E-10 68.1 7.6 58 417-475 69-126 (130)
104 4fry_A Putative signal-transdu 97.9 2.3E-05 7.8E-10 70.5 7.4 62 416-478 76-137 (157)
105 4gqw_A CBS domain-containing p 97.9 2.1E-05 7E-10 70.1 7.0 61 417-477 84-144 (152)
106 2rc3_A CBS domain; in SITU pro 97.9 2.5E-05 8.4E-10 68.3 7.4 60 416-476 72-131 (135)
107 1o50_A CBS domain-containing p 97.9 2.1E-05 7.2E-10 70.8 7.0 59 492-568 14-73 (157)
108 2ef7_A Hypothetical protein ST 97.9 2E-05 6.8E-10 68.6 6.7 61 417-477 66-126 (133)
109 3kxr_A Magnesium transporter, 97.9 2.2E-05 7.5E-10 74.4 7.4 63 416-478 114-176 (205)
110 3sl7_A CBS domain-containing p 97.8 2E-05 6.9E-10 72.4 6.6 61 416-476 96-156 (180)
111 3ocm_A Putative membrane prote 97.8 2E-05 6.8E-10 72.6 6.5 62 493-569 35-97 (173)
112 2emq_A Hypothetical conserved 97.8 1.6E-05 5.4E-10 71.5 5.7 59 493-568 10-70 (157)
113 1y5h_A Hypothetical protein RV 97.8 1.3E-05 4.3E-10 69.9 4.7 55 494-565 8-62 (133)
114 2pfi_A Chloride channel protei 97.8 2E-05 6.9E-10 71.2 6.2 61 493-568 12-72 (164)
115 3oi8_A Uncharacterized protein 97.8 1.2E-05 4.1E-10 72.6 4.4 61 493-568 37-98 (156)
116 2nyc_A Nuclear protein SNF4; b 97.8 2.9E-05 1E-09 68.4 6.9 59 493-568 7-68 (144)
117 3oco_A Hemolysin-like protein 97.8 3.2E-05 1.1E-09 69.4 7.0 59 417-476 85-143 (153)
118 1pvm_A Conserved hypothetical 97.8 2.3E-05 8E-10 72.7 6.2 58 494-568 9-66 (184)
119 2j9l_A Chloride channel protei 97.8 2.7E-05 9.1E-10 72.0 5.9 65 493-570 10-78 (185)
120 3fv6_A YQZB protein; CBS domai 97.7 3.8E-05 1.3E-09 69.3 6.5 61 416-476 79-144 (159)
121 2uv4_A 5'-AMP-activated protei 97.7 4.6E-05 1.6E-09 68.2 6.8 59 417-475 86-150 (152)
122 3pc3_A CG1753, isoform A; CBS, 97.6 6.4E-05 2.2E-09 81.8 6.2 61 493-570 383-445 (527)
123 2oux_A Magnesium transporter; 97.5 0.00014 4.9E-09 72.5 6.8 62 416-477 199-260 (286)
124 2yvy_A MGTE, Mg2+ transporter 97.5 0.00011 3.9E-09 72.9 5.9 61 416-476 197-257 (278)
125 1me8_A Inosine-5'-monophosphat 97.4 3.1E-05 1.1E-09 83.6 1.5 61 416-476 159-221 (503)
126 3usb_A Inosine-5'-monophosphat 97.4 0.00054 1.8E-08 73.9 10.8 61 416-476 173-234 (511)
127 2zy9_A Mg2+ transporter MGTE; 97.3 0.00023 7.9E-09 76.2 6.9 61 416-476 217-277 (473)
128 1zfj_A Inosine monophosphate d 96.7 0.0073 2.5E-07 64.9 11.6 60 417-476 151-211 (491)
129 4fxs_A Inosine-5'-monophosphat 96.6 0.0011 3.9E-08 71.1 4.3 53 495-564 90-142 (496)
130 2cu0_A Inosine-5'-monophosphat 96.5 0.00083 2.8E-08 72.2 2.6 59 416-474 148-206 (486)
131 4af0_A Inosine-5'-monophosphat 96.5 0.00042 1.4E-08 73.3 0.0 57 417-473 199-255 (556)
132 4avf_A Inosine-5'-monophosphat 96.4 0.0021 7.3E-08 68.9 4.6 60 416-475 145-206 (490)
133 1vrd_A Inosine-5'-monophosphat 96.3 0.0024 8.1E-08 68.8 4.6 60 417-476 154-215 (494)
134 1jcn_A Inosine monophosphate d 95.2 0.0029 9.8E-08 68.5 -0.3 58 495-566 109-166 (514)
135 2kjf_A Carnocyclin-A; circular 27.5 71 0.0024 21.5 3.6 29 35-63 23-51 (60)
136 2l2t_A Receptor tyrosine-prote 25.6 59 0.002 21.9 3.0 22 160-181 11-32 (44)
137 2ksf_A Sensor protein KDPD; me 21.3 76 0.0026 25.7 3.6 46 123-169 53-98 (107)
No 1
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=100.00 E-value=5.4e-76 Score=657.35 Aligned_cols=497 Identities=21% Similarity=0.250 Sum_probs=379.8
Q ss_pred CCChHHHHHHHHhcCCccccCcccccchhhHHHHHHHHHHHhcCCccCcchHHHHHHHHHHHHHHH--hhc---CCHHHH
Q 007694 2 MHGLLEILNQIKQSSSLDRQGFDLVAGVFPTIKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSL--MME---NNRERK 76 (593)
Q Consensus 2 ~~g~pev~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~sG~s~G~Egp~v~iga~~~~~~~~--~~~---~~~~~~ 76 (593)
||||||++.+++...++ ..+++++|++++|++++++++++|+|+|||||++|+|+++|+.+++ +|+ .++.+|
T Consensus 79 GsGIp~v~~~l~g~~~~---~~~~~~~~~~~~K~~~~~l~igsG~s~GrEGP~vqiGa~ig~~~~~~~~f~~~~~~~~~~ 155 (632)
T 3org_A 79 GSGLPQMKSILSGFYDK---MRSALELRVLFAKALGLICAIGGGLPVGWEGPNVHIACIIAHQFYRLGVFKELCTDRALR 155 (632)
T ss_dssp BCSHHHHHHHTTTTHHH---HGGGGSHHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHH
T ss_pred CCCHHHHHHHHhCcccc---ccccccHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHHHHHhhhhhhccccCCHHHH
Confidence 89999999988553211 1246889999999999999999999999999999999999999998 776 456566
Q ss_pred HHHHHhhhHHHHHHhhhchHHHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHhhhcCCcc---ceecc--ccCC
Q 007694 77 IALVAAGAASGIASGFNAAVAGCFFAIETVLRPLRAENSPPFTTAMIILASVISSTVSTVLLGTQS---AFTVP--SYDL 151 (593)
Q Consensus 77 ~~l~~~g~aagiaa~F~aPi~G~lf~~E~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~---~f~~~--~~~~ 151 (593)
+++++||+|||+||+|||||||++|++|+++++|+.+++ |+.+++|++++++++.+.++.. .|... ....
T Consensus 156 r~ll~aGaaAG~aaaF~aPlaGvlFalE~~~~~~~~~~~-----~~~~~as~~a~~v~~~~~~~~~~~~~~~~~~~~~~~ 230 (632)
T 3org_A 156 LQTLAAACAVGLASSFGAPLGGVLYSIETIASFYLVQAF-----WKGVLSALSGAIVYELLYTTPLVEAFEGTNFDASDV 230 (632)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHTCSEEETTHH-----HHHHHHHHHHHHHTTC------------------CC
T ss_pred HHHHHHHHHHHHHHHhCCccHhHHHHHHHHHHHHhHHHH-----HHHHHHHHHHHHHHHHhccCccccccccccccccCC
Confidence 689999999999999999999999999999988776654 3478999999999887665332 12111 0113
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchHhhhhHHHHHHHHhhccccccc--chhhHHHHH
Q 007694 152 KSAAELPLYLILGMLCGVVSVVFTRLVAWFTKSFDFIKEKFGLPPVVCPALGGLGAGIIALRYPGILYW--GFTNVEEIL 229 (593)
Q Consensus 152 ~~~~~l~~~~llGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~iggl~~g~~~~~~p~~~~~--g~~~~~~~l 229 (593)
++..++ +++++|++||++|.+|++++.++.+++ +++..+.++++++.+++++++. +.+|+..+. +++.+++++
T Consensus 231 ~~~~~l-~~~~lGi~~Gl~g~~f~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--l~~p~~~g~~~~~~~i~~l~ 305 (632)
T 3org_A 231 SRTQTL-LYAILGALMGVLGALFIRCVRSIYELR--MRHYPGTNRYFLVGVVALFASA--LQYPFRLFALDPRATINDLF 305 (632)
T ss_dssp CCSCTH-HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHSSTTCCTHHHHHHHHHHHHH--HTTTC------CHHHHHHHH
T ss_pred CcHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhcchhHHHHHHHHHHHHHH--HHHHHHhcCCcHHHHHHHHH
Confidence 567888 999999999999999999998887652 2222234567788888877653 567877654 466777776
Q ss_pred hcCCCC--CcchHHHHHHHHHHHHHHHHHhhccCCccceehHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCcchHHHHH
Q 007694 230 HTGKTA--SAPGIWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIGAAVGAVFGGSAAEIINSAIPGNVAVAEPQAYAL 307 (593)
Q Consensus 230 ~~~~~~--~~~~~~~l~~~~~~k~~~t~~t~g~g~~gG~f~P~l~iGa~~G~~~g~~~~~~~~~~~p~~~~~~~~~~~a~ 307 (593)
++.... ....+..++.++++|+++|++|+|+|+|||+|+|++++||++|+++|.++..++ |. ..+|+.|++
T Consensus 306 ~~~~~~~~~~~~~~~l~~~~~~k~~~t~~s~g~g~pGGif~P~l~iGA~~G~~~g~~~~~~~----p~---~~~p~~~a~ 378 (632)
T 3org_A 306 KAVPLYQTDHFGWTELILMPIIKFILVALSIGLPLPAGVFVPSFLIGAGFGRLYGELMRVVF----GN---AIVPGSYAV 378 (632)
T ss_dssp SCC----------CCSSHHHHHHHHHHHHHTTSSSBCBCHHHHHHHHHHHHHHHHHHHHHHH----CT---TSCHHHHHH
T ss_pred cCCccccccchhHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHhC----Cc---ccchHHHHH
Confidence 542210 011222456778899999999999999999999999999999999998876543 43 147899999
Q ss_pred HHHHHHHHHhccchhHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccccccchhHHHhhccCCCCCCCccccchhh
Q 007694 308 VGMAATLASVCSVPLTSVLLLFELTRDYRILLPLMGAVGLAIWVPSVANQAKETDASDKRTLARGYSSLSPMEDKNEVLW 387 (593)
Q Consensus 308 ~G~aa~~a~~~~apls~~vi~~E~tg~~~~~~P~~ia~~ia~~v~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 387 (593)
+||||++++++|+|++++ |++||||++++++|+|+++++|+++++.+++ ++|+..++.++++.....
T Consensus 379 vGmaa~~~~v~~ap~t~v-i~~E~tg~~~~~lpl~ia~~~a~~v~~~~~~----~iY~~~~~~k~lp~l~~~-------- 445 (632)
T 3org_A 379 VGAAAFTAGVTRALSCAV-IIFEVTGQIRHLVPVLISVLLAVIVGNAFNR----SLYETLVLMKHLPYMPIL-------- 445 (632)
T ss_dssp HHHHHHHHHHSCCTTHHH-HHHHHTCCCSCSHHHHHHHHHHHHHHHHHCC----CHHHHHHHHTTCCEEEEE--------
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHhCChhHHHHHHHHHHHHHHHHHHhCC----CHHHHHHHhcCCCccccc--------
Confidence 999999999999999875 8999999999999999999999999999853 678888888887754110
Q ss_pred hccCCCCcccceecccccchhHHHHHHhhhhhhhhhhc--cCceEecCCCCHHHHHHHHH-hcCCcEEEEEeCCCeEEEE
Q 007694 388 RRTDGADELELSVVENAADSEAAEEMLLEELKVSRAMS--KDFVKVALTVTLKEAIESMK-DGQQNCVLVVNGEDFLEGI 464 (593)
Q Consensus 388 ~~~~~~~~~~l~~l~~~~~~~~~~~~~l~~i~v~~~M~--~~~~~v~~~~~v~~~~~~l~-~~~~~~~pVvd~~~~lvGi 464 (593)
+ ....++++++|+|+ +++.+++++++++|+.+.|. +++++.+||+|++++++|+
T Consensus 446 --------------~---------~~~~~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGi 502 (632)
T 3org_A 446 --------------R---------RDRSPEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGA 502 (632)
T ss_dssp --------------C---------TTCCTTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCE
T ss_pred --------------c---------ccccccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEE
Confidence 0 01126788999999 89999999999999999999 8999999999999999999
Q ss_pred EeHHHHHHHHhhccCCCCCC-------------------CCcccc-----------------ccccchhhhhccCccccC
Q 007694 465 LTYGDIKRCLSKLSSDNSKG-------------------DSIASD-----------------VNTCLVSSICTRGISYRG 508 (593)
Q Consensus 465 Vt~~dL~~~l~~~~~~~~~~-------------------~~~~~~-----------------~~~~~V~dim~~~~~~~~ 508 (593)
|+++|+++.+.++..+.... +....+ ....+++|+|++++
T Consensus 503 Vt~~DL~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~p---- 578 (632)
T 3org_A 503 ISRKEIVDRLQHVLEDVPEPIAGHRTLVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSP---- 578 (632)
T ss_dssp ESHHHHTTTTTTC-------------------------------------------------------CCSCCCCC----
T ss_pred EEHHHHHHHHHHHhhhcccccccccceeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCC----
Confidence 99999988765432100000 000000 01113677777765
Q ss_pred CCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHHHH
Q 007694 509 RERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREEVN 572 (593)
Q Consensus 509 ~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~~~ 572 (593)
.++++|+++.++.++|.+++.+++||+| +|+++|+||++|+++.+.++.+
T Consensus 579 -----itV~~~~~l~ea~~~M~~~~i~~lpVve---------~G~lvGIVT~~Dll~~~~~~~~ 628 (632)
T 3org_A 579 -----IVVTSYSLVRQLHFLFVMLMPSMIYVTE---------RGKLVGIVEREDVAYGYSNSLE 628 (632)
T ss_dssp -----CEEETTCBHHHHHHHHHHTCCSEEEEEE---------TTEEEEEEEGGGTEECCCC---
T ss_pred -----ceecCCCcHHHHHHHHHhcCCCEEEEEE---------CCEEEEEEehhhHHHHHhhhHH
Confidence 8999999999999999999999999994 6999999999999887665443
No 2
>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel, FAB complex, membrane protein; 2.51A {Escherichia coli} SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A 2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ...
Probab=100.00 E-value=2e-61 Score=519.11 Aligned_cols=343 Identities=26% Similarity=0.368 Sum_probs=297.3
Q ss_pred CCChHHHHHHHHhcCCccccCcccccchhhHHHHHHHHHHHhcCCccCcchHHHHHHHHHHHHHHHhhcC-CHHHHHHHH
Q 007694 2 MHGLLEILNQIKQSSSLDRQGFDLVAGVFPTIKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMEN-NRERKIALV 80 (593)
Q Consensus 2 ~~g~pev~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~sG~s~G~Egp~v~iga~~~~~~~~~~~~-~~~~~~~l~ 80 (593)
|||+||++++++... ++...|+.+.|++++++++++|+|+|||||++|+|+++|++++|+++. ++++|++++
T Consensus 106 GsGip~v~~~l~~~~-------~~~~~r~~~~k~~~~~lti~sG~s~GrEGP~vqiGa~ig~~l~~~~~l~~~~~~r~li 178 (465)
T 1ots_A 106 GSGIPEIEGALEDQR-------PVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRLKGDEARHTLL 178 (465)
T ss_dssp SCSHHHHHHHHTTCS-------CCCHHHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHH
T ss_pred CCChHHHHHHHhCCC-------CCCcHHHHHHHHHHHHHHHhcCCCcCCcchHHHHHHHHHHHHHHHhccCCHHHHHHHH
Confidence 799999999996642 123478999999999999999999999999999999999999999984 777777899
Q ss_pred HhhhHHHHHHhhhchHHHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHhhhcCCccceeccccCCCccchHHHH
Q 007694 81 AAGAASGIASGFNAAVAGCFFAIETVLRPLRAENSPPFTTAMIILASVISSTVSTVLLGTQSAFTVPSYDLKSAAELPLY 160 (593)
Q Consensus 81 ~~g~aagiaa~F~aPi~G~lf~~E~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~ 160 (593)
+||+|||+||+||||++|++|++|+++++++.+.. ..+++++||++++++++.++|+.+.|.++.++..++++++++
T Consensus 179 ~~GaaAGlaAaF~APlaGvlFalE~l~~~~~~~~~---~~~~~~~as~~a~~v~~~~~G~~~~f~~~~~~~~~~~~l~~~ 255 (465)
T 1ots_A 179 ATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLI---SIKAVFIGVIMSTIMYRIFNHEVALIDVGKLSDAPLNTLWLY 255 (465)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTTTTSCSSSCCCC---CHHHHHHHHHHHHHHHHHHSCSCCSSCCCCCCCCCGGGHHHH
T ss_pred HHHHHHHHHHHHCCchHHHHHHHHHHHHhcchHHH---HHHHHHHHHHHHHHHHHHHcCCCceeecCCCCCCCHHHHHHH
Confidence 99999999999999999999999999987775541 123478999999999999999999999887777778899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchHhhhhHHHHHHHHhhcccccccchhhHHHHHhcCCCCCcchH
Q 007694 161 LILGMLCGVVSVVFTRLVAWFTKSFDFIKEKFGLPPVVCPALGGLGAGIIALRYPGILYWGFTNVEEILHTGKTASAPGI 240 (593)
Q Consensus 161 ~llGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~iggl~~g~~~~~~p~~~~~g~~~~~~~l~~~~~~~~~~~ 240 (593)
+++|++||++|.+|++.+.+++++++++++...+++++++.++|+++|++.+++|+.+|+||+.+++++++. ...
T Consensus 256 illGi~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gl~~g~l~~~~P~~lG~G~~~i~~~~~~~-----~~~ 330 (465)
T 1ots_A 256 LILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPATSGGGFNLIPIATAGN-----FSM 330 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCGGGSSCSTTHHHHHHHTC-----SCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHHHHHHHHHHHHhHhhcCChHHHHHHHHcCC-----chH
Confidence 999999999999999999999998876542111122378899999999999999999999999999988752 235
Q ss_pred HHHHHHHHHHHHHHHHhhccCCccceehHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCcchHHHHHHHHHHHHHHhccc
Q 007694 241 WLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIGAAVGAVFGGSAAEIINSAIPGNVAVAEPQAYALVGMAATLASVCSV 320 (593)
Q Consensus 241 ~~l~~~~~~k~~~t~~t~g~g~~gG~f~P~l~iGa~~G~~~g~~~~~~~~~~~p~~~~~~~~~~~a~~G~aa~~a~~~~a 320 (593)
..++.++++|+++|++|+|+|+|||+|+|++++||++|+++|++++.+ +|. ...+|+.|+++||+|++++++|+
T Consensus 331 ~~l~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~~~~~~----~p~--~~~~~~~~alvGmaa~~a~v~ra 404 (465)
T 1ots_A 331 GMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVEL----FPQ--YHLEAGTFAIAGMGALLAASIRA 404 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSSBSHHHHHHHHHHHHHHHHHHHHHH----CGG--GTCCHHHHHHHHHTHHHHHTSCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHHHHHHHHHHHHHHHHH----CCc--ccccHHHHHHHHHHHHHHHHHHH
Confidence 667788999999999999999999999999999999999999887654 343 23589999999999999999999
Q ss_pred hhHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccccccchhHHH
Q 007694 321 PLTSVLLLFELTRDYRILLPLMGAVGLAIWVPSVANQAKETDASDKRT 368 (593)
Q Consensus 321 pls~~vi~~E~tg~~~~~~P~~ia~~ia~~v~~~~~~~~~~~~~~~~~ 368 (593)
|+|++++++|+||++++++|+|+++++|+++++.+++ +++|+.++
T Consensus 405 Plt~ivlv~Eltg~~~~llpl~ia~~iA~~v~~~~~~---~~iY~~~l 449 (465)
T 1ots_A 405 PLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGG---KPLYSAIL 449 (465)
T ss_dssp HHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHTTTC---CCHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhCC---CChHHHHH
Confidence 9999999999999999999999999999999988854 34455443
No 3
>4ene_A CLC-EC1, H(+)/CL(-) exchange transporter CLCA; membrane protein, coupled ION transporter, cell membrane, TR protein; HET: DMU MAL; 2.40A {Escherichia coli k-12} PDB: 1ots_A 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2fed_A 2fec_A 1otu_A 2htl_A 2ht2_A 3ejy_A 1ott_A 2h2s_A 4fg6_A 2ht4_A 4ftp_A 3ejz_A 2ht3_A 2htk_A ...
Probab=100.00 E-value=6.6e-61 Score=511.96 Aligned_cols=335 Identities=26% Similarity=0.384 Sum_probs=287.1
Q ss_pred CCChHHHHHHHHhcCCccccCcccccchhhHHHHHHHHHHHhcCCccCcchHHHHHHHHHHHHHHHhhcCC-HHHHHHHH
Q 007694 2 MHGLLEILNQIKQSSSLDRQGFDLVAGVFPTIKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMENN-RERKIALV 80 (593)
Q Consensus 2 ~~g~pev~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~sG~s~G~Egp~v~iga~~~~~~~~~~~~~-~~~~~~l~ 80 (593)
|||+||++.+++..+ ++..+|+.+.|++++++++++|+|+|||||++|+|+++|++++|+++.+ +++|++++
T Consensus 91 GsGip~v~~~l~~~~-------~~~~~r~~~~k~~~~~lti~~G~s~GrEGP~vqiGa~ig~~~~~~~~~~~~~~r~~ll 163 (446)
T 4ene_A 91 GSGIPEIEGALEDQR-------PVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRLKGDEARHTLL 163 (446)
T ss_dssp SCSHHHHHHHHHTCS-------CCCHHHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHH
T ss_pred CCCHHHHHHHHhCCC-------ccchHHHHHHHHHHHHHHHhcCCccCCcchHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 899999999997531 1234789999999999999999999999999999999999999999865 45545899
Q ss_pred HhhhHHHHHHhhhchHHHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHhhhcCCccceeccccCCCccchHHHH
Q 007694 81 AAGAASGIASGFNAAVAGCFFAIETVLRPLRAENSPPFTTAMIILASVISSTVSTVLLGTQSAFTVPSYDLKSAAELPLY 160 (593)
Q Consensus 81 ~~g~aagiaa~F~aPi~G~lf~~E~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~ 160 (593)
+||+|||+||+||||++|++|++|+++++++.... ..+++++||++|+++++.+.|+.+.|.++.++.++..+++++
T Consensus 164 ~aGaaAG~aaaF~aPlaGvlFalE~l~~~~~~~~~---~~~~~~~as~~a~~v~~~~~g~~~~~~~~~~~~~~~~~l~~~ 240 (446)
T 4ene_A 164 ATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLI---SIKAVFIGVIMSTIMYRIFNHEVALIDVGKLSDAPLNTLWLY 240 (446)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHTTSCSSSCCCC---CHHHHHHHHHHHHHHHHHTTTTCCSCCCCCCCCCCGGGHHHH
T ss_pred HHHHHHHHHHHhCCcchHHHHHHHHHHhhcchhHH---HHHHHHHHHHHHHHHHHHHcCCCceeecCCCCccCHHHHHHH
Confidence 99999999999999999999999999877665210 123478999999999999999999999988777778899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchHhhhhHHHHHHHHhhcccccccchhhHHHHHhcCCCCCcchH
Q 007694 161 LILGMLCGVVSVVFTRLVAWFTKSFDFIKEKFGLPPVVCPALGGLGAGIIALRYPGILYWGFTNVEEILHTGKTASAPGI 240 (593)
Q Consensus 161 ~llGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~iggl~~g~~~~~~p~~~~~g~~~~~~~l~~~~~~~~~~~ 240 (593)
+++|++||++|.+|++.+.+.+++++++++....++++...++|+++|++.+++|+.+|.||+.+++++++. ..+
T Consensus 241 illGi~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~l~~~~p~~~G~G~~~i~~~~~~~-----~~~ 315 (446)
T 4ene_A 241 LILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPATSGGGFNLIPIATAGN-----FSM 315 (446)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCGGGSSCCSTHHHHHHTTC-----SCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHhHhhcCCcHHHHHHHHcCC-----chH
Confidence 999999999999999999999988876542111111222345677888889999999999999999888642 235
Q ss_pred HHHHHHHHHHHHHHHHhhccCCccceehHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCcchHHHHHHHHHHHHHHhccc
Q 007694 241 WLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIGAAVGAVFGGSAAEIINSAIPGNVAVAEPQAYALVGMAATLASVCSV 320 (593)
Q Consensus 241 ~~l~~~~~~k~~~t~~t~g~g~~gG~f~P~l~iGa~~G~~~g~~~~~~~~~~~p~~~~~~~~~~~a~~G~aa~~a~~~~a 320 (593)
..++.++++|+++|++|+|+|+|||+|.|++++||++|+.+|..+..++ |. ...+|+.|+++||+|++++++|+
T Consensus 316 ~~L~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~~~~~~~----p~--~~~~~~~~a~vGmaa~~a~~~~a 389 (446)
T 4ene_A 316 GMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELF----PQ--YHLEAGTFAIAGMGALLAASIRA 389 (446)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCSSBSHHHHHHHHHHHHHHHHHHHHHHC----GG--GTCCHHHHHHHHHTHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHccCCCcchhHHHHHHHHHHHHHHHHHHHHhC----Cc--cccCHHHHHHHHHHHHHHHHHcc
Confidence 6677889999999999999999999999999999999999998876543 43 13589999999999999999999
Q ss_pred hhHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcc
Q 007694 321 PLTSVLLLFELTRDYRILLPLMGAVGLAIWVPSVANQ 357 (593)
Q Consensus 321 pls~~vi~~E~tg~~~~~~P~~ia~~ia~~v~~~~~~ 357 (593)
|+|++++++|+||++++++|+|+++++|+++++.+++
T Consensus 390 Plt~~vl~~Eltg~~~~~lpl~ia~~ia~~v~~~~~~ 426 (446)
T 4ene_A 390 PLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGG 426 (446)
T ss_dssp HHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCChhHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999998854
No 4
>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog, transport protein; 3.20A {Synechocystis} PDB: 3q17_A
Probab=100.00 E-value=3.3e-61 Score=515.36 Aligned_cols=340 Identities=25% Similarity=0.362 Sum_probs=297.9
Q ss_pred CCChHHHHHHHHhcCCccccCcccccchhhHHHHHHHHHHHhcCCccCcchHHHHHHHHHHHHHHHhhcCCHHHHHHHHH
Q 007694 2 MHGLLEILNQIKQSSSLDRQGFDLVAGVFPTIKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMENNRERKIALVA 81 (593)
Q Consensus 2 ~~g~pev~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~l~sG~s~G~Egp~v~iga~~~~~~~~~~~~~~~~~~~l~~ 81 (593)
|||+||++.+++... ++...|+...|++++++++++|+|+|||||++|+|+++|++++|+++.++++|+++++
T Consensus 102 GsGIp~v~~~l~g~~-------~~~~~~~~~~k~~~~~ltig~G~S~GrEGP~vqiGa~ig~~l~~~~~~~~~~~r~ll~ 174 (466)
T 3nd0_A 102 GSGIPQIEGHLEGKL-------PLVWQRVLPIKLVGGFLSLGAGMLAGFEGPTIQMGGSIGQMTGGWFKATQENQRILIA 174 (466)
T ss_dssp BCSHHHHHHHTTSSS-------CCCHHHHHHHHHHHHHHHHHTTCSCCTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CCCHHHHHHHHcCCC-------CCchHHHHHHHHHHHHHHHhcCCCCCCcchHHHHHHHHHHHHHHHcCCChhHHHHHHH
Confidence 899999999886442 2345689999999999999999999999999999999999999999988877889999
Q ss_pred hhhHHHHHHhhhchHHHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHhhhcCCccceeccccCCCccchHHHHH
Q 007694 82 AGAASGIASGFNAAVAGCFFAIETVLRPLRAENSPPFTTAMIILASVISSTVSTVLLGTQSAFTVPSYDLKSAAELPLYL 161 (593)
Q Consensus 82 ~g~aagiaa~F~aPi~G~lf~~E~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~ 161 (593)
||+|||+||+||||++|++|++|+++++++.+... .+++++||++|+++++.++|+.+.|.++.++.++..++++++
T Consensus 175 aGaAAGlaAaF~APlaGvlFalE~l~~~~~~~~~~---~~~~~~as~~a~~v~~~~~g~~~~f~~~~~~~~~~~~l~~~i 251 (466)
T 3nd0_A 175 VGAGAGLATAFNAPLAGVALIGEEMHPRFRSQTLA---YHSLLFGCVMATIILRMIRGQSAIISLTEFKRVPLDSLWMFI 251 (466)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHSSSCCCCSSCCTT---HHHHHHHHHHHHHHHHHHTCSSCSSCCTTCCCCCGGGHHHHH
T ss_pred HHHHHHHHHHhCCchHHHHHHHHhhhccccHHHHH---HHHHHHHHHHHHHHHHHHcCCCCceecCCCCCCCHHHHHHHH
Confidence 99999999999999999999999998877544322 345789999999999999999999999877777889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchHhhhhHHHHHHHHhhcccccccchhhHHHHHhcCCCCCcchHH
Q 007694 162 ILGMLCGVVSVVFTRLVAWFTKSFDFIKEKFGLPPVVCPALGGLGAGIIALRYPGILYWGFTNVEEILHTGKTASAPGIW 241 (593)
Q Consensus 162 llGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~iggl~~g~~~~~~p~~~~~g~~~~~~~l~~~~~~~~~~~~ 241 (593)
++|++||++|.+|++.+.+++++++++++ .++++++.++|+++|++.+++|+.+|.||+.+++++++. ..++
T Consensus 252 llGi~~Gl~g~lf~~~~~~~~~~~~~~~~---~~~~~~~~l~g~~~g~l~~~~p~~~G~G~~~i~~~~~~~-----~~~~ 323 (466)
T 3nd0_A 252 ILGILFGVMGYTFNRGLFKVLDWFDRLPP---LATKWKGFLLGSIIGILSLFPLPLTDGGDNAVLWAFNSQ-----SHFS 323 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCH---HHHHHHHHHHHHHHHHHTTSSSSCSSSSHHHHHHHTTSC-----CCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccc---ccHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHcCC-----ccHH
Confidence 99999999999999999999888765432 245677889999999999999999999999999888642 2356
Q ss_pred HHHHHHHHHHHHHHHhhccCCccceehHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCcchHHHHHHHHHHHHHHhccch
Q 007694 242 LLTQLAAAKVVATALCKGSGLVGGLYAPSLMIGAAVGAVFGGSAAEIINSAIPGNVAVAEPQAYALVGMAATLASVCSVP 321 (593)
Q Consensus 242 ~l~~~~~~k~~~t~~t~g~g~~gG~f~P~l~iGa~~G~~~g~~~~~~~~~~~p~~~~~~~~~~~a~~G~aa~~a~~~~ap 321 (593)
.++.++++|+++|++|+|+|+|||+|+|++++||++|+++|.++..+ +|.. ..+++.|+++||+|++++++|+|
T Consensus 324 ~L~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~~~~~~----~p~~--~~~~~~~a~vGmaa~~a~v~~aP 397 (466)
T 3nd0_A 324 TLILVFCGRFLLTLICYGSGAIGGIFAPMLGIASIVSVAMARHFHLL----FPSQ--IPEPAVMAIAGMGALVAATVRAP 397 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCBCCSHHHHHHHHHHHHHHHHHHHHHH----CTTT--CSSTHHHHHHTTSHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCceehHHHHHHHHHHHHHHHHHHHh----CCcc--ccCHHHHHHHHHHHHHHHHHhhH
Confidence 77889999999999999999999999999999999999999877654 4532 36899999999999999999999
Q ss_pred hHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccccccchhHHH
Q 007694 322 LTSVLLLFELTRDYRILLPLMGAVGLAIWVPSVANQAKETDASDKRT 368 (593)
Q Consensus 322 ls~~vi~~E~tg~~~~~~P~~ia~~ia~~v~~~~~~~~~~~~~~~~~ 368 (593)
+|++++++|+||++++++|+|+++++|+++++.+++ +++|+..+
T Consensus 398 lt~ivlv~Eltg~~~~~lpl~ia~~iA~~v~~~~~~---~~iY~~~l 441 (466)
T 3nd0_A 398 LTAILLTIEMTDNYFVILPLLVTCLVASVVAEALGG---KPIYTVLL 441 (466)
T ss_dssp HHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHTTSCC---CCHHHHHH
T ss_pred HHHHHHHHHHHCChHHHHHHHHHHHHHHHHHHHhCC---CChHHHHH
Confidence 999999999999999999999999999999988854 35566543
No 5
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.84 E-value=1.7e-20 Score=209.39 Aligned_cols=192 Identities=18% Similarity=0.071 Sum_probs=143.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc----CC-CcchHhhhhHHHHHHHH-hhcccccccchhhHHHH
Q 007694 155 AELPLYLILGMLCGVVSVVFTRLVAWFTKSFDFIKEKF----GL-PPVVCPALGGLGAGIIA-LRYPGILYWGFTNVEEI 228 (593)
Q Consensus 155 ~~l~~~~llGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~----~~-~~~~~~~iggl~~g~~~-~~~p~~~~~g~~~~~~~ 228 (593)
..+.+.+++|+++|+++++|...+.++.+++..+.+.. .+ .+++.+.+++++.+.+. .+.|+..|+|.++++..
T Consensus 9 r~~~~~~lvGi~~gl~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~a~GsGIp~v~~~ 88 (632)
T 3org_A 9 RLVCFLTLLGVTAALFIFAVDLAVHGLEELRMKISRLAGRFAGYILYVVSGVALCLLSTFWCAVLSTEAEGSGLPQMKSI 88 (632)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGCBCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHH
Confidence 55677789999999999999999999888765432211 11 12234566677777665 57799999999999887
Q ss_pred HhcCCCCCcchHHHHHHHHHHHHHHHHHhhccCCccceehHHHHHHHHHHHHHHH--HHHHHHhhhCCCCCCCcchHHHH
Q 007694 229 LHTGKTASAPGIWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIGAAVGAVFGG--SAAEIINSAIPGNVAVAEPQAYA 306 (593)
Q Consensus 229 l~~~~~~~~~~~~~l~~~~~~k~~~t~~t~g~g~~gG~f~P~l~iGa~~G~~~g~--~~~~~~~~~~p~~~~~~~~~~~a 306 (593)
++..... ... ..-...++.|++.+.+|+|+|.|.|+++|++++||++|+.+++ .++.... +..+...+.
T Consensus 89 l~g~~~~-~~~-~~~~~~~~~K~~~~~l~igsG~s~GrEGP~vqiGa~ig~~~~~~~~f~~~~~-------~~~~~r~ll 159 (632)
T 3org_A 89 LSGFYDK-MRS-ALELRVLFAKALGLICAIGGGLPVGWEGPNVHIACIIAHQFYRLGVFKELCT-------DRALRLQTL 159 (632)
T ss_dssp TTTTHHH-HGG-GGSHHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHTTSHHHHHHHH-------SHHHHHHHH
T ss_pred HhCcccc-ccc-cccHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHHHHHhhhhhhccccC-------CHHHHHHHH
Confidence 7542100 000 0112456789999999999999999999999999999998887 5542111 123567899
Q ss_pred HHHHHHHHHHhccchhHHHHHHHHHhCC-c--hhHHHHHHHHHHHHHHHHhh
Q 007694 307 LVGMAATLASVCSVPLTSVLLLFELTRD-Y--RILLPLMGAVGLAIWVPSVA 355 (593)
Q Consensus 307 ~~G~aa~~a~~~~apls~~vi~~E~tg~-~--~~~~P~~ia~~ia~~v~~~~ 355 (593)
.||+||++|++++||+++++|++|.... + ..+.|.++++++|.++.+.+
T Consensus 160 ~aGaaAG~aaaF~aPlaGvlFalE~~~~~~~~~~~~~~~~as~~a~~v~~~~ 211 (632)
T 3org_A 160 AAACAVGLASSFGAPLGGVLYSIETIASFYLVQAFWKGVLSALSGAIVYELL 211 (632)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHTCSEEETTHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHhCCccHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998653 3 56789999999998886654
No 6
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.72 E-value=3.4e-17 Score=148.31 Aligned_cols=126 Identities=15% Similarity=0.147 Sum_probs=112.5
Q ss_pred HHhhhhhhhhhhcc--CceEecCCCCHHHHHHHHHhcCCcEEEEEeCC-CeEEEEEeHHHHHHHHhhccCCCCCCCCccc
Q 007694 413 MLLEELKVSRAMSK--DFVKVALTVTLKEAIESMKDGQQNCVLVVNGE-DFLEGILTYGDIKRCLSKLSSDNSKGDSIAS 489 (593)
Q Consensus 413 ~~l~~i~v~~~M~~--~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~-~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~ 489 (593)
..+...+++++|++ ++.++++++++.++.+.|.+++++.+||+|++ ++++|+|+.+|+...+.+..
T Consensus 18 ~~l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~----------- 86 (148)
T 3lv9_A 18 FEFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN----------- 86 (148)
T ss_dssp CGGGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS-----------
T ss_pred hccCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC-----------
Confidence 34678899999998 99999999999999999999999999999987 89999999999998765432
Q ss_pred cccccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHH
Q 007694 490 DVNTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLRE 569 (593)
Q Consensus 490 ~~~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~ 569 (593)
..+++++| +++ .++++++++.+++++|.+++.+++||+|+ +|+++|+||++|+++.+..
T Consensus 87 ---~~~v~~~m-~~~---------~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~--------~g~~~Giit~~dil~~l~~ 145 (148)
T 3lv9_A 87 ---KIELEEIL-RDI---------IYISENLTIDKALERIRKEKLQLAIVVDE--------YGGTSGVVTIEDILEEIVG 145 (148)
T ss_dssp ---CCCGGGTC-BCC---------EEEETTSBHHHHHHHHHHHTCSEEEEECT--------TSSEEEEEEHHHHHHHHHH
T ss_pred ---CccHHHhc-CCC---------eEECCCCCHHHHHHHHHhcCCeEEEEEeC--------CCCEEEEEEHHHHHHHHhC
Confidence 24788999 555 89999999999999999999999999997 7999999999999998765
Q ss_pred H
Q 007694 570 E 570 (593)
Q Consensus 570 ~ 570 (593)
+
T Consensus 146 ~ 146 (148)
T 3lv9_A 146 E 146 (148)
T ss_dssp T
T ss_pred c
Confidence 4
No 7
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.72 E-value=3.7e-17 Score=145.06 Aligned_cols=128 Identities=23% Similarity=0.303 Sum_probs=112.2
Q ss_pred hhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccccccc
Q 007694 416 EELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCL 495 (593)
Q Consensus 416 ~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~~ 495 (593)
++++++++|++++.++++++++.++.+.|.+++.+.+||+| +++++|+++.+|+...+.+... ...+
T Consensus 2 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~------------~~~~ 68 (133)
T 2ef7_A 2 EEEIVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGKS------------LETK 68 (133)
T ss_dssp CCCBGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCC------------TTCB
T ss_pred CcccHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcCCC------------cccC
Confidence 45789999999999999999999999999999999999999 8999999999999887654321 1357
Q ss_pred hhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHHHHh
Q 007694 496 VSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREEVNH 573 (593)
Q Consensus 496 V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~~~~ 573 (593)
++++|.+++ .++++++++.++++.|.+++.+++||+|+ +|+++|+||++|+++.+.+..++
T Consensus 69 v~~~~~~~~---------~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~--------~g~~~Giit~~dll~~~~~~~~~ 129 (133)
T 2ef7_A 69 AEEFMTASL---------ITIREDSPITGALALMRQFNIRHLPVVDD--------KGNLKGIISIRDITRAIDDMFET 129 (133)
T ss_dssp GGGTSEECC---------CCEETTSBHHHHHHHHHHHTCSEEEEECT--------TSCEEEEEEHHHHHHHHHHHC--
T ss_pred HHHHcCCCC---------EEECCCCCHHHHHHHHHHcCCCEEEEECC--------CCeEEEEEEHHHHHHHHHHHHHH
Confidence 899998765 78999999999999999999999999997 78999999999999998876554
No 8
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.72 E-value=1.1e-17 Score=155.47 Aligned_cols=138 Identities=20% Similarity=0.279 Sum_probs=112.0
Q ss_pred HHhhhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccC-------CCCCCC
Q 007694 413 MLLEELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSS-------DNSKGD 485 (593)
Q Consensus 413 ~~l~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~-------~~~~~~ 485 (593)
..+.+++|+|+|++++.++++++++.++.+.|.+++++.+||+|++|+++|+||.+|+++....... ......
T Consensus 13 ~~l~~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~ 92 (170)
T 4esy_A 13 RAIRQVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEILSRAIPA 92 (170)
T ss_dssp HHHHTSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCH
T ss_pred HHHcCCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhhhhhccch
Confidence 4578899999999999999999999999999999999999999999999999999998764321110 000000
Q ss_pred ----CccccccccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehh
Q 007694 486 ----SIASDVNTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYD 561 (593)
Q Consensus 486 ----~~~~~~~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~ 561 (593)
.........+++++|++++ +++++++++.+|+++|.+++.+++||+| +|+++|+||++
T Consensus 93 ~~~~~~~~~~~~~~v~~im~~~~---------~tv~~~~~l~~a~~~m~~~~~~~lpVvd---------~g~lvGivt~~ 154 (170)
T 4esy_A 93 PEVEHLFETGRKLTASAVMTQPV---------VTAAPEDSVGSIADQMRRHGIHRIPVVQ---------DGVPVGIVTRR 154 (170)
T ss_dssp HHHHHHHHHHTTCBHHHHCBCCS---------CCBCTTSBHHHHHHHHHHTTCSEEEEEE---------TTEEEEEEEHH
T ss_pred hhHHhhhccccccchhhhcccCc---------ccCCcchhHHHHHHHHHHcCCcEEEEEE---------CCEEEEEEEHH
Confidence 0000112457899999876 8999999999999999999999999998 58999999999
Q ss_pred hHHHHHH
Q 007694 562 SIWNCLR 568 (593)
Q Consensus 562 di~~~~~ 568 (593)
|+++++.
T Consensus 155 Dil~~l~ 161 (170)
T 4esy_A 155 DLLKLLL 161 (170)
T ss_dssp HHTTTSC
T ss_pred HHHHHHH
Confidence 9998764
No 9
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.72 E-value=3e-17 Score=143.22 Aligned_cols=119 Identities=23% Similarity=0.288 Sum_probs=107.8
Q ss_pred hhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccccccchhh
Q 007694 419 KVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCLVSS 498 (593)
Q Consensus 419 ~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~~V~d 498 (593)
+++++|++++.++++++++.++.+.|.+++.+.+||+|++++++|+++.+|+.+.+.... .++++
T Consensus 2 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~---------------~~v~~ 66 (122)
T 3kpb_A 2 LVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQNK---------------KTIEE 66 (122)
T ss_dssp BHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHTTC---------------CBGGG
T ss_pred chHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHhcc---------------cCHHH
Confidence 689999999999999999999999999999999999998999999999999998765432 27889
Q ss_pred hhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHH
Q 007694 499 ICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLRE 569 (593)
Q Consensus 499 im~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~ 569 (593)
+|.+++ .++++++++.++++.|.+++.+++||+|+ +|+++|+||++|+++++.+
T Consensus 67 ~~~~~~---------~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~--------~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 67 IMTRNV---------ITAHEDEPVDHVAIKMSKYNISGVPVVDD--------YRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp TSBSSC---------CCEETTSBHHHHHHHHHHHTCSEEEEECT--------TCBEEEEEEHHHHHHHHC-
T ss_pred HhcCCC---------eEECCCCCHHHHHHHHHHhCCCeEEEECC--------CCCEEEEEeHHHHHHHhhc
Confidence 998765 78999999999999999999999999997 7999999999999998764
No 10
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.72 E-value=5.2e-17 Score=147.30 Aligned_cols=137 Identities=15% Similarity=0.140 Sum_probs=114.7
Q ss_pred HHhhhhhhhhhhc--cCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCcccc
Q 007694 413 MLLEELKVSRAMS--KDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASD 490 (593)
Q Consensus 413 ~~l~~i~v~~~M~--~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~ 490 (593)
..+..++++++|+ +++.++++++++.++.+.|.+++++.+||+|++++++|+|+.+|+.+.+...... ....
T Consensus 10 ~~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~------~~~~ 83 (150)
T 3lqn_A 10 DEFQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERI------EFER 83 (150)
T ss_dssp HHHHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSB------CGGG
T ss_pred HhhhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhccc------chhH
Confidence 4578999999999 4689999999999999999999999999999999999999999999886432210 0001
Q ss_pred ccccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHH
Q 007694 491 VNTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREE 570 (593)
Q Consensus 491 ~~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~ 570 (593)
....+++++|.+++ .++++++++.+++++|.+++. +||+|+ +|+++|+||++|+++.+.+.
T Consensus 84 ~~~~~v~~~m~~~~---------~~v~~~~~l~~a~~~~~~~~~--l~Vvd~--------~g~~~Giit~~dil~~l~~~ 144 (150)
T 3lqn_A 84 LEEMKVEQVMKQDI---------PVLKLEDSFAKALEMTIDHPF--ICAVNE--------DGYFEGILTRRAILKLLNKK 144 (150)
T ss_dssp GGGCBGGGTCBSSC---------CEEETTCBHHHHHHHHHHCSE--EEEECT--------TCBEEEEEEHHHHHHHHHHH
T ss_pred HhcCCHHHHhcCCC---------ceeCCCCCHHHHHHHHHhCCE--EEEECC--------CCcEEEEEEHHHHHHHHHHH
Confidence 23468999998765 899999999999999999987 999997 79999999999999999877
Q ss_pred HHhh
Q 007694 571 VNHR 574 (593)
Q Consensus 571 ~~~~ 574 (593)
.++.
T Consensus 145 ~~~~ 148 (150)
T 3lqn_A 145 VRQH 148 (150)
T ss_dssp C---
T ss_pred hHhh
Confidence 6544
No 11
>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel, FAB complex, membrane protein; 2.51A {Escherichia coli} SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A 2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ...
Probab=99.71 E-value=7.6e-17 Score=172.91 Aligned_cols=188 Identities=20% Similarity=0.269 Sum_probs=146.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC---CCcc----hHhhhhHHHHHHHHh-hcccccccchhhH
Q 007694 154 AAELPLYLILGMLCGVVSVVFTRLVAWFTKSFDFIKEKFG---LPPV----VCPALGGLGAGIIAL-RYPGILYWGFTNV 225 (593)
Q Consensus 154 ~~~l~~~~llGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~~---~~~~----~~~~iggl~~g~~~~-~~p~~~~~g~~~~ 225 (593)
...+.+.+++|+++|+++.+|.+++++..+++........ .++| ..+.++|++++.+.. +.|+..|+|.+++
T Consensus 33 ~~~~~~~~liGv~~Gl~~~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~~~p~a~GsGip~v 112 (465)
T 1ots_A 33 LAILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSGIPEI 112 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGSSCSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhCccccCCChHHH
Confidence 3456778999999999999999999999887654422211 1212 234455666666655 5788889999999
Q ss_pred HHHHhcCCCCCcchHHHHHHHHHHHHHHHHHhhccCCccceehHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCcchHHH
Q 007694 226 EEILHTGKTASAPGIWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIGAAVGAVFGGSAAEIINSAIPGNVAVAEPQAY 305 (593)
Q Consensus 226 ~~~l~~~~~~~~~~~~~l~~~~~~k~~~t~~t~g~g~~gG~f~P~l~iGa~~G~~~g~~~~~~~~~~~p~~~~~~~~~~~ 305 (593)
++.+++... .. + ....+.|++.+.+|+++|.|.|+|+|++++||++|+.+++.++. . +..+...+
T Consensus 113 ~~~l~~~~~--~~--~--~r~~~~k~~~~~lti~sG~s~GrEGP~vqiGa~ig~~l~~~~~l-------~--~~~~~r~l 177 (465)
T 1ots_A 113 EGALEDQRP--VR--W--WRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRL-------K--GDEARHTL 177 (465)
T ss_dssp HHHHTTCSC--CC--H--HHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHHHHTTC-------C--SHHHHHHH
T ss_pred HHHHhCCCC--CC--c--HHHHHHHHHHHHHHHhcCCCcCCcchHHHHHHHHHHHHHHHhcc-------C--CHHHHHHH
Confidence 988875432 11 1 24557799999999999999999999999999999999986531 0 22467899
Q ss_pred HHHHHHHHHHHhccchhHHHHHHHHHh-CCch--h--HHHHHHHHHHHHHHHHhhc
Q 007694 306 ALVGMAATLASVCSVPLTSVLLLFELT-RDYR--I--LLPLMGAVGLAIWVPSVAN 356 (593)
Q Consensus 306 a~~G~aa~~a~~~~apls~~vi~~E~t-g~~~--~--~~P~~ia~~ia~~v~~~~~ 356 (593)
..||+||++++++++|+++++|++|.. ++++ . +.|.++++++|+.+++.+.
T Consensus 178 i~~GaaAGlaAaF~APlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v~~~~~ 233 (465)
T 1ots_A 178 LATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIFN 233 (465)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTTTTSCSSSCCCCCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHCCchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999965 4443 5 8899999999999988763
No 12
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.71 E-value=5.9e-17 Score=148.89 Aligned_cols=139 Identities=19% Similarity=0.210 Sum_probs=115.0
Q ss_pred hhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccccccch
Q 007694 417 ELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCLV 496 (593)
Q Consensus 417 ~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~~V 496 (593)
.++++++|++++.++++++++.++.+.|.+.+.+.+||+|++++++|+|+.+|+...+.........+. ......++
T Consensus 4 ~~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~---~~~~~~~v 80 (160)
T 2o16_A 4 MIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGD---SLAFETPL 80 (160)
T ss_dssp CCBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC------------CCCBH
T ss_pred cCcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhccccccc---chhcccCH
Confidence 467999999999999999999999999999999999999988999999999999887654221000000 01124589
Q ss_pred hhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHHHHhhhh
Q 007694 497 SSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREEVNHRKS 576 (593)
Q Consensus 497 ~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~~~~~~~ 576 (593)
+++|.+++ .++++++++.+++++|.+.+.+.+||+| +|+++|+||++|+++.+.+.++.+.+
T Consensus 81 ~~im~~~~---------~~v~~~~~l~~a~~~m~~~~~~~lpVvd---------~g~lvGiit~~dil~~~~~~~~~~~~ 142 (160)
T 2o16_A 81 FEVMHTDV---------TSVAPQAGLKESAIYMQKHKIGCLPVVA---------KDVLVGIITDSDFVTIAINLLELQEE 142 (160)
T ss_dssp HHHSCSCE---------EEBCTTSBHHHHHHHHHHTTCSCEEEEE---------TTEEEEEECHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCC---------eEECCCCCHHHHHHHHHHhCCCEEEEEE---------CCEEEEEEEHHHHHHHHHHHhccccc
Confidence 99998765 8999999999999999999999999998 48999999999999999887765544
No 13
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.71 E-value=7.2e-17 Score=148.10 Aligned_cols=134 Identities=22% Similarity=0.258 Sum_probs=116.3
Q ss_pred HHHhhhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccc
Q 007694 412 EMLLEELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDV 491 (593)
Q Consensus 412 ~~~l~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~ 491 (593)
...+..++++++|+++ +++.+++++.++.+.|.+++++.+||+|++++++|+|+.+|+...+..... .
T Consensus 11 ~~~l~~~~v~~im~~~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-----------~ 78 (159)
T 3fv6_A 11 ADKLKKLQVKDFQSIP-VVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQE-----------L 78 (159)
T ss_dssp HHHHTTCBGGGSCBCC-CEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSCSC-----------T
T ss_pred HHHHhhCCHHHHcCCC-EEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhccCc-----------c
Confidence 3567889999999985 589999999999999999999999999988999999999999987643221 1
Q ss_pred cccchhhhhcc--CccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCC---eEEEEEehhhHHHH
Q 007694 492 NTCLVSSICTR--GISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQ---RIVAILHYDSIWNC 566 (593)
Q Consensus 492 ~~~~V~dim~~--~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~---~lvGiIt~~di~~~ 566 (593)
...+++++|.+ ++ .++++++++.+++++|.+++.+++||+|+ +| +++|+||++|++++
T Consensus 79 ~~~~v~~~m~~~~~~---------~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--------~g~~~~~vGiit~~dil~~ 141 (159)
T 3fv6_A 79 TSVPVHIIMTRMPNI---------TVCRREDYVMDIAKHLIEKQIDALPVIKD--------TDKGFEVIGRVTKTNMTKI 141 (159)
T ss_dssp TTCBGGGTSEETTSC---------CCBCTTSBHHHHHHHHHHHTCSEEEEEEE--------CSSSEEEEEEEEHHHHHHH
T ss_pred cCcCHHHHHcCCCCc---------EEECCCCCHHHHHHHHHHcCCcEEEEEeC--------CCcceeEEEEEEHHHHHHH
Confidence 24589999987 54 78999999999999999999999999997 66 99999999999999
Q ss_pred HHHHHHhh
Q 007694 567 LREEVNHR 574 (593)
Q Consensus 567 ~~~~~~~~ 574 (593)
+.+.....
T Consensus 142 l~~~~~~~ 149 (159)
T 3fv6_A 142 LVSLSENE 149 (159)
T ss_dssp HHHHHTTC
T ss_pred HHHHhhcc
Confidence 98766543
No 14
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.71 E-value=4.3e-17 Score=144.40 Aligned_cols=124 Identities=11% Similarity=0.126 Sum_probs=106.9
Q ss_pred hhhhhhhcc--CceEecCCCCHHHHHHHHHhcCCcEEEEEeC-CCeEEEEEeHHHHHHHHhhccCCCCCCCCcccccccc
Q 007694 418 LKVSRAMSK--DFVKVALTVTLKEAIESMKDGQQNCVLVVNG-EDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTC 494 (593)
Q Consensus 418 i~v~~~M~~--~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~-~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~ 494 (593)
++++++|++ ++.++++++++.++.+.|.+++++.+||+|+ +++++|+++.+|+++.+.+... ....
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~-----------~~~~ 70 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKE-----------FTKE 70 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSC-----------CCHH
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCc-----------cchh
Confidence 578999974 6889999999999999999999999999976 5899999999999988654321 1235
Q ss_pred chhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHH
Q 007694 495 LVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREE 570 (593)
Q Consensus 495 ~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~ 570 (593)
+++++|+ ++ .++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++.+..+
T Consensus 71 ~v~~~m~-~~---------~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~--------~g~lvGiit~~Dil~~l~g~ 128 (130)
T 3hf7_A 71 IMLRAAD-EI---------YFVPEGTPLSTQLVKFQRNKKKVGLVVDE--------YGDIQGLVTVEDILEEIVGD 128 (130)
T ss_dssp HHHHHSB-CC---------CEEETTCBHHHHHHHHHHHCCCEEEEECT--------TSCEEEEEEHHHHHHHHHC-
T ss_pred hHHHhcc-CC---------eEeCCCCcHHHHHHHHHhcCCeEEEEEcC--------CCCEEEEeeHHHHHHHHhCC
Confidence 7899984 33 78999999999999999999999999997 79999999999999987654
No 15
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.71 E-value=2.9e-17 Score=145.34 Aligned_cols=123 Identities=16% Similarity=0.225 Sum_probs=105.7
Q ss_pred hhhhhhhhhhcc--CceEecCCCCHHHHHHHHHhcCCcEEEEEeCC-CeEEEEEeHHHHHHHHhhccCCCCCCCCccccc
Q 007694 415 LEELKVSRAMSK--DFVKVALTVTLKEAIESMKDGQQNCVLVVNGE-DFLEGILTYGDIKRCLSKLSSDNSKGDSIASDV 491 (593)
Q Consensus 415 l~~i~v~~~M~~--~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~-~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~ 491 (593)
+.+++++++|++ ++.++++++++.++.+.|.+++++.+||+|++ ++++|+|+.+|+...+.+...
T Consensus 3 l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~------------ 70 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSG------------ 70 (130)
T ss_dssp ----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTT------------
T ss_pred cCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCC------------
Confidence 567899999995 56689999999999999999999999999987 899999999999988654321
Q ss_pred cccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHH
Q 007694 492 NTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLR 568 (593)
Q Consensus 492 ~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~ 568 (593)
..+++++|++ + .++++++++.++++.|.+++.+++||+|+ +|+++|+||++|+++.+.
T Consensus 71 -~~~v~~~m~~-~---------~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~--------~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 71 -QKQLGAVMRP-I---------QVVLNNTALPKVFDQMMTHRLQLALVVDE--------YGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp -TSBHHHHSEE-C---------CEEETTSCHHHHHHHHHHHTCCEEEEECT--------TSCEEEEEEHHHHHHHHH
T ss_pred -cCCHHHHhcC-C---------cCcCCCCcHHHHHHHHHHcCCeEEEEEcC--------CCCEEEEEEHHHHHHHHc
Confidence 3478999954 4 78999999999999999999999999997 799999999999998764
No 16
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.71 E-value=2.1e-17 Score=145.67 Aligned_cols=121 Identities=12% Similarity=0.196 Sum_probs=105.4
Q ss_pred hhhhhhhhccC--ceEecCCCCHHHHHHHHHhcCCcEEEEEeCC-CeEEEEEeHHHHHHHHhhccCCCCCCCCccccccc
Q 007694 417 ELKVSRAMSKD--FVKVALTVTLKEAIESMKDGQQNCVLVVNGE-DFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNT 493 (593)
Q Consensus 417 ~i~v~~~M~~~--~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~-~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~ 493 (593)
+++++++|+++ +.++++++++.++.+.|.+++++.+||+|++ ++++|+|+.+|+.+.+.+.. ..
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~-------------~~ 68 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDA-------------EA 68 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTC-------------CC
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccC-------------CC
Confidence 46799999954 8999999999999999999999999999987 89999999999987654322 13
Q ss_pred cchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHH
Q 007694 494 CLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLR 568 (593)
Q Consensus 494 ~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~ 568 (593)
.+++++|++ + .++++++++.+++++|.+++.+++||+|+ +|+++|+||++|+++.+.
T Consensus 69 ~~v~~~m~~-~---------~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--------~g~~~Giit~~dll~~l~ 125 (127)
T 3nqr_A 69 FSMDKVLRT-A---------VVVPESKRVDRMLKEFRSQRYHMAIVIDE--------FGGVSGLVTIEDILELIV 125 (127)
T ss_dssp CCHHHHCBC-C---------CEEETTCBHHHHHHHHHHTTCCEEEEECT--------TSCEEEEEEHHHHHHHC-
T ss_pred CCHHHHcCC-C---------eEECCCCcHHHHHHHHHhcCCeEEEEEeC--------CCCEEEEEEHHHHHHHHh
Confidence 578999965 3 68999999999999999999999999997 799999999999998764
No 17
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.70 E-value=3e-17 Score=144.82 Aligned_cols=124 Identities=13% Similarity=0.145 Sum_probs=109.5
Q ss_pred hhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccccccc
Q 007694 416 EELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCL 495 (593)
Q Consensus 416 ~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~~ 495 (593)
.+++++++|++++.++++++++.++.+.|.+++++.+||+|+ ++++|+|+.+|+.+.+.+... ...+
T Consensus 3 ~s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~~~~~------------~~~~ 69 (128)
T 3gby_A 3 ASVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKGWPT------------VKEK 69 (128)
T ss_dssp TTCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCSSSCC------------TTCB
T ss_pred cceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHhhCCc------------ccCc
Confidence 357899999999999999999999999999999999999998 999999999999876433221 1247
Q ss_pred hhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHH
Q 007694 496 VSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLRE 569 (593)
Q Consensus 496 V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~ 569 (593)
++++|.+++ .++++++++.++++.|.+++.+++||+|+ +|+++|+||++|+++.+.+
T Consensus 70 v~~~m~~~~---------~~v~~~~~l~~~~~~~~~~~~~~lpVvd~--------~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 70 LGEELLETV---------RSYRPGEQLFDNLISVAAAKCSVVPLADE--------DGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp CCGGGCBCC---------CCBCTTSBGGGSHHHHHHCSSSEEEEECT--------TCBEEEEEEHHHHHHHHHT
T ss_pred HHHHccCCC---------cEECCCCCHHHHHHHHHhCCCcEEEEECC--------CCCEEEEEEHHHHHHHHHh
Confidence 889998766 78999999999999999999999999997 7999999999999998764
No 18
>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog, transport protein; 3.20A {Synechocystis} PDB: 3q17_A
Probab=99.70 E-value=2.2e-16 Score=168.73 Aligned_cols=187 Identities=19% Similarity=0.259 Sum_probs=142.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-CCc--chHhh-hh---HHHHHHHH-hhcccccccchhhH
Q 007694 154 AAELPLYLILGMLCGVVSVVFTRLVAWFTKSFDFIKEKFG-LPP--VVCPA-LG---GLGAGIIA-LRYPGILYWGFTNV 225 (593)
Q Consensus 154 ~~~l~~~~llGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~~-~~~--~~~~~-ig---gl~~g~~~-~~~p~~~~~g~~~~ 225 (593)
...+...+++|+++|+.+.+|.+++++..+++....+... .++ |+.+. ++ +++.+.+. .+.|+..|+|.+++
T Consensus 29 ~~l~l~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~l~~~~~p~a~GsGIp~v 108 (466)
T 3nd0_A 29 PRTLVAAIVVGLITGVLGAGFKSAVNNMLQWRSQLAQILAPIPPLAWLVTALISGGMVALSFWLMKRFAPDTSGSGIPQI 108 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSCTHHHHHHHHHHHHHHHHHHHHHTTTCGGGSBCSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHCCCcCCCCHHHH
Confidence 3456778999999999999999999999888764432221 121 33333 22 22233233 45688889999999
Q ss_pred HHHHhcCCCCCcchHHHHHHHHHHHHHHHHHhhccCCccceehHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCcchHHH
Q 007694 226 EEILHTGKTASAPGIWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIGAAVGAVFGGSAAEIINSAIPGNVAVAEPQAY 305 (593)
Q Consensus 226 ~~~l~~~~~~~~~~~~~l~~~~~~k~~~t~~t~g~g~~gG~f~P~l~iGa~~G~~~g~~~~~~~~~~~p~~~~~~~~~~~ 305 (593)
+..+++... +.. ...+..|++.+.+|+++|.|.|+|+|++++||++|+.+++.++. +..+...+
T Consensus 109 ~~~l~g~~~---~~~---~~~~~~k~~~~~ltig~G~S~GrEGP~vqiGa~ig~~l~~~~~~----------~~~~~r~l 172 (466)
T 3nd0_A 109 EGHLEGKLP---LVW---QRVLPIKLVGGFLSLGAGMLAGFEGPTIQMGGSIGQMTGGWFKA----------TQENQRIL 172 (466)
T ss_dssp HHHTTSSSC---CCH---HHHHHHHHHHHHHHHHTTCSCCTHHHHHHHHHHHHHHHHHHTTC----------CHHHHHHH
T ss_pred HHHHcCCCC---Cch---HHHHHHHHHHHHHHHhcCCCCCCcchHHHHHHHHHHHHHHHcCC----------ChhHHHHH
Confidence 888875432 111 23456799999999999999999999999999999999986532 22467899
Q ss_pred HHHHHHHHHHHhccchhHHHHHHHHHh-CCc----hhHHHHHHHHHHHHHHHHhhc
Q 007694 306 ALVGMAATLASVCSVPLTSVLLLFELT-RDY----RILLPLMGAVGLAIWVPSVAN 356 (593)
Q Consensus 306 a~~G~aa~~a~~~~apls~~vi~~E~t-g~~----~~~~P~~ia~~ia~~v~~~~~ 356 (593)
..||+||.+++++++|+++++|++|.. +++ ..+.|.++++++|+.+++.+.
T Consensus 173 l~aGaAAGlaAaF~APlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v~~~~~ 228 (466)
T 3nd0_A 173 IAVGAGAGLATAFNAPLAGVALIGEEMHPRFRSQTLAYHSLLFGCVMATIILRMIR 228 (466)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHSSSCCCCSSCCTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCchHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999964 455 236699999999999988774
No 19
>4ene_A CLC-EC1, H(+)/CL(-) exchange transporter CLCA; membrane protein, coupled ION transporter, cell membrane, TR protein; HET: DMU MAL; 2.40A {Escherichia coli k-12} PDB: 1ots_A 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2fed_A 2fec_A 1otu_A 2htl_A 2ht2_A 3ejy_A 1ott_A 2h2s_A 4fg6_A 2ht4_A 4ftp_A 3ejz_A 2ht3_A 2htk_A ...
Probab=99.70 E-value=4.7e-16 Score=165.78 Aligned_cols=187 Identities=19% Similarity=0.193 Sum_probs=142.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcc---hHh----hhhHHHHHHHHh-hcccccccchhhH
Q 007694 154 AAELPLYLILGMLCGVVSVVFTRLVAWFTKSFDFIKEKFGLPPV---VCP----ALGGLGAGIIAL-RYPGILYWGFTNV 225 (593)
Q Consensus 154 ~~~l~~~~llGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~---~~~----~iggl~~g~~~~-~~p~~~~~g~~~~ 225 (593)
...+...+++|+++|+.+.+|..++++..+++...-.....++| +.+ .+++++.+.+.. +.|+.-|+|.+++
T Consensus 18 ~~~~~~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~a~GsGip~v 97 (446)
T 4ene_A 18 LAILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSGIPEI 97 (446)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGSSCSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCHHHH
Confidence 35567789999999999999999999998887544222222221 111 223444454444 4688899999999
Q ss_pred HHHHhcCCCCCcchHHHHHHHHHHHHHHHHHhhccCCccceehHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCcchH-H
Q 007694 226 EEILHTGKTASAPGIWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIGAAVGAVFGGSAAEIINSAIPGNVAVAEPQ-A 304 (593)
Q Consensus 226 ~~~l~~~~~~~~~~~~~l~~~~~~k~~~t~~t~g~g~~gG~f~P~l~iGa~~G~~~g~~~~~~~~~~~p~~~~~~~~~-~ 304 (593)
+..+++... ... ...++.|++.+.+|+++|.|.|+|+|++++||++|+.+++.++. +..+.. .
T Consensus 98 ~~~l~~~~~---~~~---~r~~~~k~~~~~lti~~G~s~GrEGP~vqiGa~ig~~~~~~~~~----------~~~~~r~~ 161 (446)
T 4ene_A 98 EGALEDQRP---VRW---WRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRL----------KGDEARHT 161 (446)
T ss_dssp HHHHHTCSC---CCH---HHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHHHHTTC----------CSHHHHHH
T ss_pred HHHHhCCCc---cch---HHHHHHHHHHHHHHHhcCCccCCcchHHHHHHHHHHHHHHHcCC----------CHHHHHHH
Confidence 988875321 111 23456799999999999999999999999999999999876532 123554 8
Q ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHh-CCc----hhHHHHHHHHHHHHHHHHhhc
Q 007694 305 YALVGMAATLASVCSVPLTSVLLLFELT-RDY----RILLPLMGAVGLAIWVPSVAN 356 (593)
Q Consensus 305 ~a~~G~aa~~a~~~~apls~~vi~~E~t-g~~----~~~~P~~ia~~ia~~v~~~~~ 356 (593)
+..||+||.+++++++|+++++|++|.. +++ ..+.|.++++++|..+++.+.
T Consensus 162 ll~aGaaAG~aaaF~aPlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v~~~~~ 218 (446)
T 4ene_A 162 LLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIFN 218 (446)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHTTSCSSSCCCCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999975 343 348899999999999988874
No 20
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.70 E-value=7.8e-17 Score=150.01 Aligned_cols=127 Identities=13% Similarity=0.146 Sum_probs=108.9
Q ss_pred HHhhhhhhhhhhc--cCceEecCCCCHHHHHHHHHhcCCcEEEEEeCC-CeEEEEEeHHHHHHHHhhccCCCCCCCCccc
Q 007694 413 MLLEELKVSRAMS--KDFVKVALTVTLKEAIESMKDGQQNCVLVVNGE-DFLEGILTYGDIKRCLSKLSSDNSKGDSIAS 489 (593)
Q Consensus 413 ~~l~~i~v~~~M~--~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~-~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~ 489 (593)
..+...+++++|+ +++.++++++++.++.+.|.+++++.+||+|++ ++++|+|+.+|++..+.+..
T Consensus 37 ~~l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~----------- 105 (172)
T 3lhh_A 37 FRLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGE----------- 105 (172)
T ss_dssp ------CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTTC-----------
T ss_pred hccCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhcC-----------
Confidence 3467899999999 778999999999999999999999999999987 89999999999998865431
Q ss_pred cccccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHH
Q 007694 490 DVNTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLRE 569 (593)
Q Consensus 490 ~~~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~ 569 (593)
..+++++| +++ .++++++++.+++++|.+++.+++||+|+ +|+++|+||++|+++.+..
T Consensus 106 ---~~~v~~im-~~~---------~~v~~~~~l~~a~~~m~~~~~~~~pVvd~--------~g~lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 106 ---RLELVDLV-KNC---------NFVPNSLSGMELLEHFRTTGSQMVFVVDE--------YGDLKGLVTLQDMMDALTG 164 (172)
T ss_dssp ---CCCGGGGC-BCC---------EEEETTCCHHHHHHHHHHHTCSEEEEECT--------TSCEEEEEEHHHHHHHHHT
T ss_pred ---cccHHHHh-cCC---------eEeCCCCCHHHHHHHHHHcCCeEEEEEeC--------CCCEEEEeeHHHHHHHHhC
Confidence 24789999 655 89999999999999999999999999997 7999999999999998875
Q ss_pred HH
Q 007694 570 EV 571 (593)
Q Consensus 570 ~~ 571 (593)
++
T Consensus 165 ~~ 166 (172)
T 3lhh_A 165 EF 166 (172)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 21
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.70 E-value=3.5e-17 Score=144.70 Aligned_cols=122 Identities=14% Similarity=0.152 Sum_probs=106.1
Q ss_pred hhhhhhhhhc--cCceEecCCCCHHHHHHHHHhcCCcEEEEEeCC-CeEEEEEeHHHHHHHHhhccCCCCCCCCcccccc
Q 007694 416 EELKVSRAMS--KDFVKVALTVTLKEAIESMKDGQQNCVLVVNGE-DFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVN 492 (593)
Q Consensus 416 ~~i~v~~~M~--~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~-~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~ 492 (593)
.+++++++|+ +++.++++++++.++.+.|.+++++.+||+|++ ++++|+|+.+|+.+.+...
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~--------------- 67 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEP--------------- 67 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCT---------------
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccC---------------
Confidence 4578999999 678899999999999999999999999999986 8999999999997764321
Q ss_pred ccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHH
Q 007694 493 TCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREE 570 (593)
Q Consensus 493 ~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~ 570 (593)
..+++++|++ + .++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++.+..+
T Consensus 68 ~~~v~~~m~~-~---------~~v~~~~~l~~~~~~m~~~~~~~~pVvd~--------~g~~~Giit~~Dil~~l~ge 127 (129)
T 3jtf_A 68 ALDIRSLVRP-A---------VFIPEVKRLNVLLREFRASRNHLAIVIDE--------HGGISGLVTMEDVLEQIVGD 127 (129)
T ss_dssp TSCGGGGCBC-C---------CEEETTCBHHHHHHHHHTSSCCEEEEECC---------CCEEEEEEHHHHHHHHHHT
T ss_pred CcCHHHHhCC-C---------eEeCCCCcHHHHHHHHHhcCCeEEEEEeC--------CCCEEEEEEHHHHHHHHhCC
Confidence 2468888865 3 78999999999999999999999999997 79999999999999988754
No 22
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.70 E-value=8.7e-17 Score=147.21 Aligned_cols=134 Identities=13% Similarity=0.092 Sum_probs=110.9
Q ss_pred hhhhhhhhhhcc--CceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCcccccc
Q 007694 415 LEELKVSRAMSK--DFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVN 492 (593)
Q Consensus 415 l~~i~v~~~M~~--~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~ 492 (593)
+-..+++++|++ ++.++.+++++.++.+.|.+++++.+||+|++++++|+++.+|+...+...... .....
T Consensus 12 ~l~~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~-------~~~~~ 84 (156)
T 3k6e_A 12 FLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLS-------QEIMA 84 (156)
T ss_dssp HHHTTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCC-------HHHHT
T ss_pred HhhccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccc-------ccccc
Confidence 334578999985 789999999999999999999999999999989999999999998876543320 00122
Q ss_pred ccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHHHH
Q 007694 493 TCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREEVN 572 (593)
Q Consensus 493 ~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~~~ 572 (593)
..+++++|.+++ .++++++++.+++++|.+++ .+||||+ +|+++|+||++|+++++...+.
T Consensus 85 ~~~v~~im~~~~---------~~v~~~~~l~~~~~~m~~~~--~lpVVd~--------~g~l~GiiT~~Dil~~~~~~~~ 145 (156)
T 3k6e_A 85 DTDIVHMTKTDV---------AVVSPDFTITEVLHKLVDES--FLPVVDA--------EGIFQGIITRKSILKAVNALLH 145 (156)
T ss_dssp TSBGGGTCBCSC---------CCBCTTCCHHHHHHHTTTSS--EEEEECT--------TSBEEEEEEHHHHHHHHHHHSC
T ss_pred ccCHHHhhcCCc---------eecccccHHHHHHHHHHHcC--CeEEEec--------CCEEEEEEEHHHHHHHHHHHhc
Confidence 458999998876 89999999999999998776 4999997 8999999999999999987654
Q ss_pred hh
Q 007694 573 HR 574 (593)
Q Consensus 573 ~~ 574 (593)
+.
T Consensus 146 ~~ 147 (156)
T 3k6e_A 146 DF 147 (156)
T ss_dssp C-
T ss_pred cc
Confidence 43
No 23
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.69 E-value=1.3e-16 Score=145.49 Aligned_cols=129 Identities=18% Similarity=0.157 Sum_probs=112.1
Q ss_pred HHHhhhhhhhhhhcc--CceEecCCCCHHHHHHHHHhcCCcEEEEE-eC-CCeEEEEEeHHHHHHHHhhccCCCCCCCCc
Q 007694 412 EMLLEELKVSRAMSK--DFVKVALTVTLKEAIESMKDGQQNCVLVV-NG-EDFLEGILTYGDIKRCLSKLSSDNSKGDSI 487 (593)
Q Consensus 412 ~~~l~~i~v~~~M~~--~~~~v~~~~~v~~~~~~l~~~~~~~~pVv-d~-~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~ 487 (593)
...+...+++++|++ ++.++++++++.++.+.|.+++++.+||+ |+ +++++|+|+.+|+...+....
T Consensus 14 ~~~l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~--------- 84 (153)
T 3oco_A 14 AFEMNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD--------- 84 (153)
T ss_dssp HHHHHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT---------
T ss_pred hcccCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC---------
Confidence 345788999999997 89999999999999999999999999999 64 489999999999998765432
Q ss_pred cccccccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHH
Q 007694 488 ASDVNTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCL 567 (593)
Q Consensus 488 ~~~~~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~ 567 (593)
..+++++| +++ .++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++.+
T Consensus 85 -----~~~v~~~m-~~~---------~~v~~~~~l~~~~~~m~~~~~~~lpVvd~--------~g~~vGivt~~dil~~l 141 (153)
T 3oco_A 85 -----KAKISTIM-RDI---------VSVPENMKVPDVMEEMSAHRVPMAIVIDE--------YGGTSGIITDKDVYEEL 141 (153)
T ss_dssp -----TSBGGGTC-BCC---------EEEETTSBHHHHHHHHHHTTCSCEEEECT--------TSCEEEEECHHHHHHHH
T ss_pred -----CCcHHHHh-CCC---------eEECCCCCHHHHHHHHHHcCCcEEEEEeC--------CCCEEEEeeHHHHHHHH
Confidence 24789999 655 89999999999999999999999999997 79999999999999998
Q ss_pred HHHHH
Q 007694 568 REEVN 572 (593)
Q Consensus 568 ~~~~~ 572 (593)
..++.
T Consensus 142 ~~~~~ 146 (153)
T 3oco_A 142 FGNLR 146 (153)
T ss_dssp HC---
T ss_pred hccCC
Confidence 86554
No 24
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.69 E-value=2.7e-17 Score=146.84 Aligned_cols=126 Identities=14% Similarity=0.163 Sum_probs=106.4
Q ss_pred hhhhhhhhc--cCceEecCCCCHHHHHHHHHhcCCcEEEEEeCC-CeEEEEEeHHHHHHHHhhccCCCCCCCCccccccc
Q 007694 417 ELKVSRAMS--KDFVKVALTVTLKEAIESMKDGQQNCVLVVNGE-DFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNT 493 (593)
Q Consensus 417 ~i~v~~~M~--~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~-~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~ 493 (593)
+++++++|+ +++.++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|+++.+.+.. ...
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~------------~~~ 69 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKAD------------GDS 69 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSS------------GGG
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhcc------------CCC
Confidence 467999999 678899999999999999999999999999987 79999999999987754221 124
Q ss_pred cchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHHHH
Q 007694 494 CLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREEVN 572 (593)
Q Consensus 494 ~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~~~ 572 (593)
.+++++|++ + .++++++++.+++++|.+++.+++||+|+ +|+++|+||++|+++.+..++.
T Consensus 70 ~~v~~~m~~-~---------~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~--------~g~lvGiit~~Dil~~l~~~~~ 130 (136)
T 3lfr_A 70 DDVKKLLRP-A---------TFVPESKRLNVLLREFRANHNHMAIVIDE--------YGGVAGLVTIEDVLEQIVGDIE 130 (136)
T ss_dssp CCGGGTCBC-C---------CEEETTCBHHHHHHHHHHHTCCEEEEECT--------TSCEEEEEEHHHHHTTC-----
T ss_pred cCHHHHcCC-C---------eEECCCCcHHHHHHHHHhcCCeEEEEEeC--------CCCEEEEEEHHHHHHHHhCCCc
Confidence 578999965 4 79999999999999999999999999997 7999999999999998876554
No 25
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.69 E-value=1e-16 Score=143.11 Aligned_cols=127 Identities=24% Similarity=0.362 Sum_probs=110.7
Q ss_pred HhhhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHH-HHHHhhccCCCCCCCCcccccc
Q 007694 414 LLEELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDI-KRCLSKLSSDNSKGDSIASDVN 492 (593)
Q Consensus 414 ~l~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL-~~~l~~~~~~~~~~~~~~~~~~ 492 (593)
.+.+.+++++|++++.++++++++.++.+.|.+++.+.+||+|++++++|+++.+|+ ...+.... ..
T Consensus 4 ~l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~------------~~ 71 (138)
T 2p9m_A 4 TLKNIKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKY------------TL 71 (138)
T ss_dssp -CTTCBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTTCC------------CS
T ss_pred ccccCCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhhcc------------cC
Confidence 356789999999999999999999999999999999999999988999999999999 77654321 12
Q ss_pred ccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcC-----CcccceeecchhhhhccCCeEEEEEehhhHHHHH
Q 007694 493 TCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKG-----IKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCL 567 (593)
Q Consensus 493 ~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~-----~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~ 567 (593)
..+++++|.+++ .++++++++.++++.|.+++ .+.+||+|+ +|+++|+||++|+++.+
T Consensus 72 ~~~v~~~m~~~~---------~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~--------~g~~~Giit~~dll~~~ 134 (138)
T 2p9m_A 72 ETTIGDVMTKDV---------ITIHEDASILEAIKKMDISGKKEEIINQLPVVDK--------NNKLVGIISDGDIIRTI 134 (138)
T ss_dssp SCBHHHHSCSSC---------CCEETTSBHHHHHHHHTCC-----CCCEEEEECT--------TSBEEEEEEHHHHHHHH
T ss_pred CcCHHHHhCCCc---------EEECCCCCHHHHHHHHHhcCCccccccEEEEECC--------CCeEEEEEEHHHHHHHH
Confidence 458999998765 78999999999999999999 999999997 78999999999999887
Q ss_pred HH
Q 007694 568 RE 569 (593)
Q Consensus 568 ~~ 569 (593)
.+
T Consensus 135 ~~ 136 (138)
T 2p9m_A 135 SK 136 (138)
T ss_dssp HH
T ss_pred Hh
Confidence 65
No 26
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.69 E-value=2.4e-16 Score=138.03 Aligned_cols=122 Identities=19% Similarity=0.286 Sum_probs=106.9
Q ss_pred hhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccccccchh
Q 007694 418 LKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCLVS 497 (593)
Q Consensus 418 i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~~V~ 497 (593)
++++++|++++.++++++++.++.+.|.+++.+.+||+| +++++|+++.+|+.+.+.+... ....+++
T Consensus 1 m~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~~~~-----------~~~~~v~ 68 (125)
T 1pbj_A 1 MRVEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEGDD-----------LAEVKVW 68 (125)
T ss_dssp -CHHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHHTCC-----------TTTSBHH
T ss_pred CCHHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhcCCc-----------ccccCHH
Confidence 478999999999999999999999999999999999999 8999999999999887654321 1245899
Q ss_pred hhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHH
Q 007694 498 SICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLRE 569 (593)
Q Consensus 498 dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~ 569 (593)
++|.+++ .++++++++.++++.|.+++.+.+||+| +|+++|+||++|+++.+.+
T Consensus 69 ~~m~~~~---------~~v~~~~~l~~~~~~~~~~~~~~l~Vvd---------~~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 69 EVMERDL---------VTISPRATIKEAAEKMVKNVVWRLLVEE---------DDEIIGVISATDILRAKMA 122 (125)
T ss_dssp HHCBCGG---------GEECTTSCHHHHHHHHHHHTCSEEEEEE---------TTEEEEEEEHHHHHHHHC-
T ss_pred HHcCCCC---------eEECCCCCHHHHHHHHHhcCCcEEEEEE---------CCEEEEEEEHHHHHHHHHh
Confidence 9998765 8999999999999999999999999999 4899999999999988753
No 27
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.68 E-value=3.2e-16 Score=140.51 Aligned_cols=123 Identities=15% Similarity=0.202 Sum_probs=108.8
Q ss_pred hhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCC--eEEEEEeHHHHHHHHhhccCCCCCCCCcccccccc
Q 007694 417 ELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGED--FLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTC 494 (593)
Q Consensus 417 ~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~--~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~ 494 (593)
.++++++|++++.++++++++.++.+.|.+++++.+||+|+++ +++|+|+.+|+.+.+.+... ...
T Consensus 4 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~~------------~~~ 71 (141)
T 2rih_A 4 AIRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLD------------LDG 71 (141)
T ss_dssp -CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTCC------------TTS
T ss_pred ceEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCCC------------CCC
Confidence 3679999999999999999999999999999999999999888 99999999999987654321 135
Q ss_pred chhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHH
Q 007694 495 LVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLRE 569 (593)
Q Consensus 495 ~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~ 569 (593)
+++++|.+++ .+++++ ++.+++++|.+++.+++||+|+ +|+++|+||++|+++....
T Consensus 72 ~v~~~m~~~~---------~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~--------~g~~~Giit~~dll~~~~~ 128 (141)
T 2rih_A 72 PAMPIANSPI---------TVLDTD-PVHVAAEKMRRHNIRHVVVVNK--------NGELVGVLSIRDLCFERAI 128 (141)
T ss_dssp BSGGGCBCCC---------EEETTS-BHHHHHHHHHHHTCSEEEEECT--------TSCEEEEEEHHHHHSCHHH
T ss_pred CHHHHcCCCC---------eEEcCC-CHHHHHHHHHHcCCeEEEEEcC--------CCcEEEEEEHHHHHHHHHH
Confidence 7899998766 899999 9999999999999999999997 7999999999999887664
No 28
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.68 E-value=1.7e-16 Score=141.63 Aligned_cols=127 Identities=22% Similarity=0.285 Sum_probs=110.4
Q ss_pred hhhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHH-HHhhccCCCCCCCCccccccc
Q 007694 415 LEELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKR-CLSKLSSDNSKGDSIASDVNT 493 (593)
Q Consensus 415 l~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~-~l~~~~~~~~~~~~~~~~~~~ 493 (593)
+..++++++|++++.++++++++.++.+.|.+++++.+||+|++++++|+|+.+|+.+ .+.+.. ...
T Consensus 4 l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~------------~~~ 71 (138)
T 2yzi_A 4 DMKAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGL------------PYD 71 (138)
T ss_dssp CTTSBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCC------------CTT
T ss_pred hhhhhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCC------------ccc
Confidence 4678899999999999999999999999999999999999998899999999999974 332211 123
Q ss_pred cchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHHH
Q 007694 494 CLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREEV 571 (593)
Q Consensus 494 ~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~~ 571 (593)
.+++++|.+++ .++++++++.++++.|.+++.+++ |+|+ +|+++|+||++|+++.+.++.
T Consensus 72 ~~v~~~m~~~~---------~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~--------~g~~~Giit~~dil~~~~~~~ 131 (138)
T 2yzi_A 72 IPVERIMTRNL---------ITANVNTPLGEVLRKMAEHRIKHI-LIEE--------EGKIVGIFTLSDLLEASRRRL 131 (138)
T ss_dssp SBGGGTCBCSC---------CEEETTSBHHHHHHHHHHHTCSEE-EEEE--------TTEEEEEEEHHHHHHHHHCCS
T ss_pred CCHHHHhhCCC---------eEECCCCcHHHHHHHHHhcCCCEE-EECC--------CCCEEEEEEHHHHHHHHHHHH
Confidence 57899998766 899999999999999999999999 9997 799999999999999887543
No 29
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.68 E-value=2.6e-16 Score=143.69 Aligned_cols=138 Identities=13% Similarity=0.091 Sum_probs=113.9
Q ss_pred HHhhhhhhhhhhc--cCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCcccc
Q 007694 413 MLLEELKVSRAMS--KDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASD 490 (593)
Q Consensus 413 ~~l~~i~v~~~M~--~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~ 490 (593)
..+...+++++|+ +++.++++++++.++.+.|.+++++.+||+|++++++|+|+.+|+.+.+...... ..+
T Consensus 10 ~~l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~-------~~~ 82 (156)
T 3ctu_A 10 ETFLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLS-------QEI 82 (156)
T ss_dssp HHHHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCC-------HHH
T ss_pred HHHHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhcccc-------ccc
Confidence 4567788999999 6889999999999999999999999999999899999999999999886543210 000
Q ss_pred ccccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHH
Q 007694 491 VNTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREE 570 (593)
Q Consensus 491 ~~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~ 570 (593)
....+++++|.+++ .++++++++.++++.|.+++ ++||+|+ +|+++|+||++|+++++.+.
T Consensus 83 ~~~~~v~~~m~~~~---------~~v~~~~~l~~a~~~~~~~~--~lpVvd~--------~g~~~Giit~~dil~~l~~~ 143 (156)
T 3ctu_A 83 MADTDIVHMTKTDV---------AVVSPDFTITEVLHKLVDES--FLPVVDA--------EGIFQGIITRKSILKAVNAL 143 (156)
T ss_dssp HTTSBGGGGCBCSC---------CCBCSSCCHHHHHHHTTTSS--EEEEECT--------TSBEEEEEETTHHHHHHHHH
T ss_pred cccCcHHHhccCCc---------eeeCCCCcHHHHHHHHHHcC--eEEEEcC--------CCeEEEEEEHHHHHHHHHHH
Confidence 12458999998765 78999999999999999886 6999997 79999999999999999877
Q ss_pred HHhhhh
Q 007694 571 VNHRKS 576 (593)
Q Consensus 571 ~~~~~~ 576 (593)
+++...
T Consensus 144 ~~~~~~ 149 (156)
T 3ctu_A 144 LHDFSK 149 (156)
T ss_dssp SCC---
T ss_pred HHhhch
Confidence 665444
No 30
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.67 E-value=1.2e-16 Score=144.81 Aligned_cols=140 Identities=21% Similarity=0.218 Sum_probs=109.3
Q ss_pred hhhhhhhhhcc--CceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCC--CCCCCccccc
Q 007694 416 EELKVSRAMSK--DFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDN--SKGDSIASDV 491 (593)
Q Consensus 416 ~~i~v~~~M~~--~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~--~~~~~~~~~~ 491 (593)
..++++++|++ ++.++++++++.++.+.|.+++++.+||+|++++++|+|+.+|+...+....... ..........
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 82 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKT 82 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHHTC----
T ss_pred ceEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHHHHHHHh
Confidence 35789999999 8999999999999999999999999999999899999999999975422110000 0000000011
Q ss_pred cccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHHH
Q 007694 492 NTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREEV 571 (593)
Q Consensus 492 ~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~~ 571 (593)
...+++++|.+++ .++++++++.+++++|.+++.+++||+|+ +|+++|+||++|+++.+.+..
T Consensus 83 ~~~~v~~~m~~~~---------~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~--------~g~~~Giit~~dil~~~~~~~ 145 (152)
T 4gqw_A 83 NGKLVGDLMTPAP---------LVVEEKTNLEDAAKILLETKYRRLPVVDS--------DGKLVGIITRGNVVRAALQIK 145 (152)
T ss_dssp -CCBHHHHSEESC---------CCEESSSBHHHHHHHHHHSSCCEEEEECT--------TSBEEEEEEHHHHHHHHHC--
T ss_pred ccccHHHhcCCCc---------eEECCCCcHHHHHHHHHHCCCCEEEEECC--------CCcEEEEEEHHHHHHHHHhcc
Confidence 2458999998866 78999999999999999999999999997 799999999999999987654
Q ss_pred H
Q 007694 572 N 572 (593)
Q Consensus 572 ~ 572 (593)
.
T Consensus 146 ~ 146 (152)
T 4gqw_A 146 R 146 (152)
T ss_dssp -
T ss_pred c
Confidence 4
No 31
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.67 E-value=2.9e-16 Score=143.66 Aligned_cols=138 Identities=19% Similarity=0.145 Sum_probs=112.2
Q ss_pred HhhhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcE-EEEEeCCCeEEEEEeHHHHHHHHhhc----cCCCCCCCCcc
Q 007694 414 LLEELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNC-VLVVNGEDFLEGILTYGDIKRCLSKL----SSDNSKGDSIA 488 (593)
Q Consensus 414 ~l~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~-~pVvd~~~~lvGiVt~~dL~~~l~~~----~~~~~~~~~~~ 488 (593)
....++++++|++++.++++++++.++.+.|.+++.+. +||+|++ +++|+|+.+|+.+.+... ......-....
T Consensus 12 ~~~~~~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~ 90 (157)
T 1o50_A 12 HMKVKDVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSM 90 (157)
T ss_dssp TCBHHHHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHHHHHHCCCC-------CC
T ss_pred hhccccHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHH
Confidence 45778999999999999999999999999999999999 9999988 999999999998875421 00000000000
Q ss_pred ccccccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHH
Q 007694 489 SDVNTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLR 568 (593)
Q Consensus 489 ~~~~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~ 568 (593)
......+++++|.+ + .++++++++.+++++|.+.+.+.+||+|+ +|+++|+||++|+++.+.
T Consensus 91 ~~~~~~~v~~im~~-~---------~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--------~g~~vGiit~~dll~~l~ 152 (157)
T 1o50_A 91 KRLIAKNASEIMLD-P---------VYVHMDTPLEEALKLMIDNNIQEMPVVDE--------KGEIVGDLNSLEILLALW 152 (157)
T ss_dssp CCCSSCBHHHHCBC-C---------CCBCTTSBHHHHHHHHHHHTCSEEEEECT--------TSCEEEEEEHHHHHHHHH
T ss_pred HHHcCCcHHHHcCC-C---------eEECCCCCHHHHHHHHHHCCCcEEEEEcC--------CCEEEEEEEHHHHHHHHH
Confidence 01234589999987 6 89999999999999999999999999997 789999999999999887
Q ss_pred HH
Q 007694 569 EE 570 (593)
Q Consensus 569 ~~ 570 (593)
++
T Consensus 153 ~~ 154 (157)
T 1o50_A 153 KG 154 (157)
T ss_dssp HS
T ss_pred Hh
Confidence 54
No 32
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.67 E-value=1.3e-16 Score=141.42 Aligned_cols=127 Identities=22% Similarity=0.270 Sum_probs=107.0
Q ss_pred HhhhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHH-HHhhccCCCCCCCCcccccc
Q 007694 414 LLEELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKR-CLSKLSSDNSKGDSIASDVN 492 (593)
Q Consensus 414 ~l~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~-~l~~~~~~~~~~~~~~~~~~ 492 (593)
.+..++++++|++++.++++++++.++.+.|.+++.+.+||+|++++++|+++.+|+.. .+.+... ..
T Consensus 4 ~~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~-----------~~ 72 (133)
T 1y5h_A 4 PFTMTTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLD-----------PN 72 (133)
T ss_dssp ----CCHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTCC-----------TT
T ss_pred hhhhcCHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCCC-----------cc
Confidence 34567899999999999999999999999999999999999998899999999999984 4433211 12
Q ss_pred ccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHH
Q 007694 493 TCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLRE 569 (593)
Q Consensus 493 ~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~ 569 (593)
..+++++|.+++ .++++++++.++++.|.+++.+++||+| +|+++|+||++|+++.+.+
T Consensus 73 ~~~v~~~m~~~~---------~~v~~~~~l~~~~~~m~~~~~~~l~Vvd---------~g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 73 TATAGELARDSI---------YYVDANASIQEMLNVMEEHQVRRVPVIS---------EHRLVGIVTEADIARHLPE 131 (133)
T ss_dssp TSBHHHHHTTCC---------CCEETTCCHHHHHHHHHHHTCSEEEEEE---------TTEEEEEEEHHHHHHTCC-
T ss_pred ccCHHHHhcCCC---------EEECCCCCHHHHHHHHHHcCCCEEEEEE---------CCEEEEEEEHHHHHHHHHh
Confidence 358999998766 8899999999999999999999999999 4799999999999987643
No 33
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.67 E-value=1.7e-16 Score=146.47 Aligned_cols=132 Identities=18% Similarity=0.282 Sum_probs=113.7
Q ss_pred HHhhhhhhhhhhcc---CceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccc
Q 007694 413 MLLEELKVSRAMSK---DFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIAS 489 (593)
Q Consensus 413 ~~l~~i~v~~~M~~---~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~ 489 (593)
..+..++++++|++ ++.++++++++.++.+.|.+++++.+||+|++++++|+|+.+|+.+.+..+..
T Consensus 19 ~~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~---------- 88 (165)
T 3fhm_A 19 FQGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGA---------- 88 (165)
T ss_dssp CSSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGG----------
T ss_pred HhhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCC----------
Confidence 34677899999996 78999999999999999999999999999999999999999999988655421
Q ss_pred cccccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHH
Q 007694 490 DVNTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLRE 569 (593)
Q Consensus 490 ~~~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~ 569 (593)
.....+++++|.+++ .++++++++.+++++|.+++.+++||+| +|+++|+||++|+++.+.+
T Consensus 89 ~~~~~~v~~~m~~~~---------~~v~~~~~l~~a~~~m~~~~~~~lpVvd---------~g~~~Giit~~dil~~~~~ 150 (165)
T 3fhm_A 89 ASLQQSVSVAMTKNV---------VRCQHNSTTDQLMEIMTGGRFRHVPVEE---------NGRLAGIISIGDVVKARIG 150 (165)
T ss_dssp GGGTSBGGGTSBSSC---------CCBCTTCBHHHHHHHHHHHTCSEEEEEE---------TTEEEEEEEHHHHHHHTTC
T ss_pred ccccCCHHHHhcCCC---------eEECCCCcHHHHHHHHHHcCCCEEEEEE---------CCEEEEEEEHHHHHHHHHH
Confidence 012458999998766 7899999999999999999999999999 4899999999999998865
Q ss_pred HHH
Q 007694 570 EVN 572 (593)
Q Consensus 570 ~~~ 572 (593)
+.+
T Consensus 151 ~~~ 153 (165)
T 3fhm_A 151 EIE 153 (165)
T ss_dssp C--
T ss_pred HHH
Confidence 543
No 34
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.66 E-value=2.8e-16 Score=142.41 Aligned_cols=120 Identities=21% Similarity=0.344 Sum_probs=107.0
Q ss_pred hhhhhhhhcc--CceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCcccccccc
Q 007694 417 ELKVSRAMSK--DFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTC 494 (593)
Q Consensus 417 ~i~v~~~M~~--~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~ 494 (593)
.++++++|++ ++.++++++++.++.+.|.+++++.+||+|++++++|+|+.+|+.+.+.+... ....
T Consensus 27 ~~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-----------~~~~ 95 (149)
T 3k2v_A 27 LLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTGVD-----------MRDA 95 (149)
T ss_dssp TSBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSSSC-----------CTTC
T ss_pred ccCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcCCC-----------cccC
Confidence 3689999999 99999999999999999999999999999989999999999999987654321 1245
Q ss_pred chhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHH
Q 007694 495 LVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWN 565 (593)
Q Consensus 495 ~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~ 565 (593)
+++++|.+++ .++++++++.+++++|.+++.+++||+|+ ++++|+||++|+++
T Consensus 96 ~v~~~m~~~~---------~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---------~~~~Giit~~dil~ 148 (149)
T 3k2v_A 96 SIADVMTRGG---------IRIRPGTLAVDALNLMQSRHITCVLVADG---------DHLLGVVHMHDLLR 148 (149)
T ss_dssp BHHHHSEESC---------CEECTTCBHHHHHHHHHHHTCSEEEEEET---------TEEEEEEEHHHHTC
T ss_pred cHHHHcCCCC---------eEECCCCCHHHHHHHHHHcCCCEEEEecC---------CEEEEEEEHHHhhc
Confidence 8999998866 89999999999999999999999999995 49999999999864
No 35
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.66 E-value=3.4e-16 Score=146.28 Aligned_cols=140 Identities=16% Similarity=0.195 Sum_probs=111.1
Q ss_pred hhhhhhhhcc--CceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCC-----CCCC--CC-
Q 007694 417 ELKVSRAMSK--DFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSD-----NSKG--DS- 486 (593)
Q Consensus 417 ~i~v~~~M~~--~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~-----~~~~--~~- 486 (593)
.++++++|++ ++.++++++++.++.+.|.+++++.+||+|++++++|+|+.+|+.+........ .... ..
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 82 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTW 82 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CC
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchh
Confidence 3678999999 899999999999999999999999999999999999999999997532111000 0000 00
Q ss_pred --------ccccccccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEE
Q 007694 487 --------IASDVNTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAIL 558 (593)
Q Consensus 487 --------~~~~~~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiI 558 (593)
........+++++|.+++ .++++++++.+++++|.+++.+++||+|+ +|+++|+|
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~m~~~~---------~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--------~g~~vGii 145 (180)
T 3sl7_A 83 KTFNELQKLISKTYGKVVGDLMTPSP---------LVVRDSTNLEDAARLLLETKFRRLPVVDA--------DGKLIGIL 145 (180)
T ss_dssp CSHHHHHHHHHTTTTCBHHHHSEESC---------CCEETTSBHHHHHHHHTTSTTCEEEEECT--------TCBEEEEE
T ss_pred hhhHHHHHHHhccccccHHHHhCCCc---------eEeCCCCcHHHHHHHHHHcCCCEEEEECC--------CCeEEEEE
Confidence 000112457999998866 78999999999999999999999999997 79999999
Q ss_pred ehhhHHHHHHHHHHh
Q 007694 559 HYDSIWNCLREEVNH 573 (593)
Q Consensus 559 t~~di~~~~~~~~~~ 573 (593)
|++|+++.+.+...+
T Consensus 146 t~~dil~~~~~~~~~ 160 (180)
T 3sl7_A 146 TRGNVVRAALQIKRN 160 (180)
T ss_dssp EHHHHHHHHHHHHHT
T ss_pred EHHHHHHHHHHHhhh
Confidence 999999998876554
No 36
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.66 E-value=5.1e-16 Score=146.06 Aligned_cols=128 Identities=16% Similarity=0.272 Sum_probs=111.9
Q ss_pred hhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccccccchh
Q 007694 418 LKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCLVS 497 (593)
Q Consensus 418 i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~~V~ 497 (593)
++++++|++++.++++++++.++.+.|.+++++.+||+|++++++|+++.+|+...+..... .....+++
T Consensus 9 ~~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~----------~~~~~~v~ 78 (184)
T 1pvm_A 9 MRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNK----------KPDEVPIR 78 (184)
T ss_dssp CBGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCC----------CGGGSBGG
T ss_pred cCHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhccc----------CcccCCHH
Confidence 78999999999999999999999999999999999999988999999999999887543211 01245899
Q ss_pred hhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHH-HHH
Q 007694 498 SICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLRE-EVN 572 (593)
Q Consensus 498 dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~-~~~ 572 (593)
++|.+++ .++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++.+.+ +..
T Consensus 79 ~im~~~~---------~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--------~g~~~Givt~~dll~~~~~~~~~ 137 (184)
T 1pvm_A 79 LVMRKPI---------PKVKSDYDVKDVAAYLSENGLERCAVVDD--------PGRVVGIVTLTDLSRYLSRASIT 137 (184)
T ss_dssp GTSBSSC---------CEEETTCBHHHHHHHHHHHTCSEEEEECT--------TCCEEEEEEHHHHTTTSCHHHHH
T ss_pred HHhCCCC---------cEECCCCCHHHHHHHHHHcCCcEEEEEcC--------CCeEEEEEEHHHHHHHHHhhhHH
Confidence 9998765 89999999999999999999999999997 7999999999999988766 543
No 37
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.66 E-value=9.1e-16 Score=136.40 Aligned_cols=123 Identities=20% Similarity=0.272 Sum_probs=106.5
Q ss_pred hhhhhhc---cCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccccccc
Q 007694 419 KVSRAMS---KDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCL 495 (593)
Q Consensus 419 ~v~~~M~---~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~~ 495 (593)
+++++|+ +++.++++++++.++.+.|.+++.+.+||+| +++++|+|+.+|+.+.+..... +....+
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~----------~~~~~~ 75 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSYLLDK----------PVKDTQ 75 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGGGSSS----------CGGGSB
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHHHcCC----------CcccCC
Confidence 8999999 8999999999999999999999999999998 8999999999999864332211 122458
Q ss_pred hhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHH
Q 007694 496 VSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREE 570 (593)
Q Consensus 496 V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~ 570 (593)
++++|.+++ .++++++++.+++++|.+++.+++||+| +|+++|+||++|+++.+.++
T Consensus 76 v~~~m~~~~---------~~v~~~~~l~~~~~~m~~~~~~~lpVvd---------~g~~~Giit~~dll~~~~~~ 132 (135)
T 2rc3_A 76 VKEIMTRQV---------AYVDLNNTNEDCMALITEMRVRHLPVLD---------DGKVIGLLSIGDLVKDAISQ 132 (135)
T ss_dssp GGGTSBCSC---------CCBCTTCBHHHHHHHHHHHTCSEEEEEE---------TTEEEEEEEHHHHHHHHHC-
T ss_pred HHHhccCCC---------eEECCCCcHHHHHHHHHHhCCCEEEEEe---------CCEEEEEEEHHHHHHHHHhc
Confidence 999998766 8899999999999999999999999998 48999999999999887643
No 38
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.66 E-value=5.7e-16 Score=148.33 Aligned_cols=126 Identities=17% Similarity=0.154 Sum_probs=111.2
Q ss_pred HhhhhhhhhhhccCceEecCCCCHHHHHHHHHhc---CCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCcccc
Q 007694 414 LLEELKVSRAMSKDFVKVALTVTLKEAIESMKDG---QQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASD 490 (593)
Q Consensus 414 ~l~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~---~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~ 490 (593)
.+...+++++|++++.++++++++.++++.|.+. +...+||+|++++++|+|+.+|+...
T Consensus 50 ~~~~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~----------------- 112 (205)
T 3kxr_A 50 QYSENEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKH----------------- 112 (205)
T ss_dssp HSCTTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTS-----------------
T ss_pred CCCcchHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhC-----------------
Confidence 3556789999999999999999999999999886 67899999999999999999998532
Q ss_pred ccccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHH
Q 007694 491 VNTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREE 570 (593)
Q Consensus 491 ~~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~ 570 (593)
....+++++|.+++ .++++++++.++++.|.+++.+.+||||+ +|+++|+||++|+++.+.++
T Consensus 113 ~~~~~v~~im~~~~---------~~v~~~~~l~~a~~~m~~~~~~~lpVVD~--------~g~lvGiIT~~Dil~~i~~e 175 (205)
T 3kxr_A 113 EPHEPLISLLSEDS---------RALTANTTLLDAAEAIEHSREIELPVIDD--------AGELIGRVTLRAATALVREH 175 (205)
T ss_dssp CTTSBGGGGCCSSC---------CCEETTSCHHHHHHHHHTSSCSEEEEECT--------TSBEEEEEEHHHHHHHHHHH
T ss_pred CCcchHHHHhcCCC---------eEECCCCCHHHHHHHHHhcCCCEEEEEcC--------CCeEEEEEEHHHHHHHHHHH
Confidence 11347999998766 89999999999999999999999999997 79999999999999999877
Q ss_pred HHh
Q 007694 571 VNH 573 (593)
Q Consensus 571 ~~~ 573 (593)
..+
T Consensus 176 ~~e 178 (205)
T 3kxr_A 176 YEA 178 (205)
T ss_dssp HC-
T ss_pred HHH
Confidence 654
No 39
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.65 E-value=5.6e-16 Score=152.40 Aligned_cols=147 Identities=13% Similarity=0.169 Sum_probs=109.2
Q ss_pred hhhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCC--CeEEEEEeHHHHHHHHhhccCCCCC---------
Q 007694 415 LEELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGE--DFLEGILTYGDIKRCLSKLSSDNSK--------- 483 (593)
Q Consensus 415 l~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~--~~lvGiVt~~dL~~~l~~~~~~~~~--------- 483 (593)
...++|+|+|+++++++.+++++.++.++|.+++++.+||||++ ++++|+|+++||...+.........
T Consensus 10 ~~~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~~ 89 (250)
T 2d4z_A 10 KYNIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEAD 89 (250)
T ss_dssp CSSCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCBC
T ss_pred cCCCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhccc
Confidence 35678999999999999999999999999999999999999974 6899999999999876432100000
Q ss_pred --------------CCCc---cccc------------------------------------------------------c
Q 007694 484 --------------GDSI---ASDV------------------------------------------------------N 492 (593)
Q Consensus 484 --------------~~~~---~~~~------------------------------------------------------~ 492 (593)
+... ..+. .
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (250)
T 2d4z_A 90 EEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFEE 169 (250)
T ss_dssp CC---------------------------------------------------------------------------CCS
T ss_pred ccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCccccc
Confidence 0000 0000 0
Q ss_pred ccch-------hhhhccCcccc--CCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhH
Q 007694 493 TCLV-------SSICTRGISYR--GRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSI 563 (593)
Q Consensus 493 ~~~V-------~dim~~~~~~~--~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di 563 (593)
+.+. .+.+...+++. .++.++++|.++++|.+++++|.+.+++++||++ +|+++||||++|+
T Consensus 170 ~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~---------~GrLVGIVTrkDl 240 (250)
T 2d4z_A 170 MLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS---------MGKLVGVVALAEI 240 (250)
T ss_dssp CCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE---------TTEEEEEEEHHHH
T ss_pred ccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE---------CCEEEEEEEHHHH
Confidence 0000 01233333332 3567789999999999999999999999999998 5999999999999
Q ss_pred HHHHHHH
Q 007694 564 WNCLREE 570 (593)
Q Consensus 564 ~~~~~~~ 570 (593)
++++...
T Consensus 241 ~kai~~~ 247 (250)
T 2d4z_A 241 QAAIEGS 247 (250)
T ss_dssp HHHHHC-
T ss_pred HHHHHHH
Confidence 9998743
No 40
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.64 E-value=6.5e-16 Score=141.61 Aligned_cols=136 Identities=14% Similarity=0.124 Sum_probs=112.7
Q ss_pred Hhhhhhhhhhhcc--CceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccc
Q 007694 414 LLEELKVSRAMSK--DFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDV 491 (593)
Q Consensus 414 ~l~~i~v~~~M~~--~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~ 491 (593)
.+..++++++|++ ++.++++++++.++.+.|.+++++.+||+|++++++|+|+.+|+...+...... .....
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~------~~~~~ 83 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERI------EFEKL 83 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSB------CGGGT
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhccc------chhhh
Confidence 3567899999998 899999999999999999999999999999889999999999998876442210 00011
Q ss_pred cccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHHH
Q 007694 492 NTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREEV 571 (593)
Q Consensus 492 ~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~~ 571 (593)
...+++++|.+++ .++++++++.+++++|.+.+. +||+|+ +|+++|+||++|+++.+.++.
T Consensus 84 ~~~~v~~~m~~~~---------~~v~~~~~l~~a~~~m~~~~~--lpVvd~--------~g~~vGiit~~dil~~~~~~~ 144 (159)
T 1yav_A 84 DQITVEEVMLTDI---------PRLHINDPIMKGFGMVINNGF--VCVEND--------EQVFEGIFTRRVVLKELNKHI 144 (159)
T ss_dssp TTSBHHHHSBCSC---------CEEETTSBHHHHHHHTTTCSE--EEEECT--------TCBEEEEEEHHHHHHHHHHHC
T ss_pred ccCCHHHhcCCCC---------ceEcCCCCHHHHHHHHHhCCE--EEEEeC--------CCeEEEEEEHHHHHHHHHHHH
Confidence 2458999998866 899999999999999998877 999997 799999999999999988766
Q ss_pred Hhh
Q 007694 572 NHR 574 (593)
Q Consensus 572 ~~~ 574 (593)
.+.
T Consensus 145 ~~~ 147 (159)
T 1yav_A 145 RSL 147 (159)
T ss_dssp ---
T ss_pred Hhh
Confidence 543
No 41
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.64 E-value=1.7e-15 Score=137.69 Aligned_cols=130 Identities=17% Similarity=0.210 Sum_probs=110.5
Q ss_pred HHHHhhhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCcccc
Q 007694 411 EEMLLEELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASD 490 (593)
Q Consensus 411 ~~~~l~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~ 490 (593)
....+..++++++ +++.++++++++.++.+.|.+++.+.+||+|++++++|+|+.+|+...+......
T Consensus 16 ~~~~l~~~~v~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~~~---------- 83 (152)
T 2uv4_A 16 MSKSLEELQIGTY--ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYN---------- 83 (152)
T ss_dssp HTSBHHHHTCSBC--SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCSSCC----------
T ss_pred HHhhHHHccCCcc--CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcchhhh----------
Confidence 3456788999998 7888999999999999999999999999999889999999999998876543210
Q ss_pred ccccchhhhhc------cCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHH
Q 007694 491 VNTCLVSSICT------RGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIW 564 (593)
Q Consensus 491 ~~~~~V~dim~------~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~ 564 (593)
....++.++|. +++ .++++++++.+++++|.+.+.+.+||+|+ +|+++|+||++|++
T Consensus 84 ~~~~~v~~~m~~~~~~~~~~---------~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--------~g~~vGiit~~dil 146 (152)
T 2uv4_A 84 NLDVSVTKALQHRSHYFEGV---------LKCYLHETLETIINRLVEAEVHRLVVVDE--------NDVVKGIVSLSDIL 146 (152)
T ss_dssp CTTSBGGGGGGTCCHHHHTC---------SEECTTSBHHHHHHHHHHHTCSEEEEECT--------TSBEEEEEEHHHHH
T ss_pred hhcchHHHHHhhhhcccCCC---------eEECCCCcHHHHHHHHHHcCCeEEEEECC--------CCeEEEEEEHHHHH
Confidence 11346888886 443 79999999999999999999999999997 79999999999999
Q ss_pred HHHHH
Q 007694 565 NCLRE 569 (593)
Q Consensus 565 ~~~~~ 569 (593)
+.+.+
T Consensus 147 ~~l~~ 151 (152)
T 2uv4_A 147 QALVL 151 (152)
T ss_dssp HHHC-
T ss_pred HHHHh
Confidence 88753
No 42
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.64 E-value=1.4e-15 Score=139.73 Aligned_cols=139 Identities=18% Similarity=0.260 Sum_probs=112.6
Q ss_pred hhhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeC--CCeEEEEEeHHHHHHHHhhccCCCCCCCCcccccc
Q 007694 415 LEELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNG--EDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVN 492 (593)
Q Consensus 415 l~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~--~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~ 492 (593)
...++++++|++++.++++++++.++.+.|.+++++.+||+|+ +++++|+|+.+|+...+........ +..
T Consensus 10 ~~~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~-------~~~ 82 (164)
T 2pfi_A 10 SHHVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRA-------PGH 82 (164)
T ss_dssp CCSCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC--------------CC
T ss_pred ccCCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccC-------Ccc
Confidence 4567899999999999999999999999999999999999996 6899999999999887654322100 012
Q ss_pred ccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHHHH
Q 007694 493 TCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREEVN 572 (593)
Q Consensus 493 ~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~~~ 572 (593)
..++.++|.++.. .+..+.++++++++.+++++|.+++.+++||+| +|+++|+||++|+++++.+...
T Consensus 83 ~~~v~~~m~~~~~---~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd---------~g~l~Giit~~dil~~~~~~~~ 150 (164)
T 2pfi_A 83 QQCLQDILARGCP---TEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS---------RGRAVGCVSWVEMKKAISNLTN 150 (164)
T ss_dssp CCBHHHHHHTTCC---CBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE---------TTEEEEEEEHHHHHHHHHHHHS
T ss_pred cchhhhhhccccc---ccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE---------CCEEEEEEEHHHHHHHHHhhhC
Confidence 3478899987520 011147899999999999999999999999999 4899999999999999887654
No 43
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.64 E-value=1.8e-15 Score=135.69 Aligned_cols=133 Identities=13% Similarity=0.212 Sum_probs=108.0
Q ss_pred hhhhhhh---hhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCcccccc
Q 007694 416 EELKVSR---AMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVN 492 (593)
Q Consensus 416 ~~i~v~~---~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~ 492 (593)
.+.++++ +|.+++.++++++++.++.+.|.+++++.+||+|++++++|+++.+|+.+.+..... +..
T Consensus 6 ~~~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~----------~~~ 75 (144)
T 2nyc_A 6 LKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIY----------NDL 75 (144)
T ss_dssp GGSBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC--------------C
T ss_pred hhcchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhccccc----------ccC
Confidence 3456677 888999999999999999999999999999999988999999999999887654221 012
Q ss_pred ccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHH
Q 007694 493 TCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLRE 569 (593)
Q Consensus 493 ~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~ 569 (593)
..+++++|.+.+.. ...+.++++++++.++++.|.+++.+++||+|+ +|+++|+||++|+++.+.+
T Consensus 76 ~~~v~~~m~~~~~~---~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~--------~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 76 SLSVGEALMRRSDD---FEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD--------VGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp CSBHHHHHHHCC---------CEECTTSBHHHHHHHHHHHTCSEEEEECT--------TSBEEEEEEHHHHHHHHHH
T ss_pred CccHHHHHhcCccc---cCCCeEECCCCcHHHHHHHHHHCCCCEEEEECC--------CCCEEEEEEHHHHHHHHHh
Confidence 35889998762100 012379999999999999999999999999997 7999999999999998754
No 44
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.63 E-value=9.3e-16 Score=142.86 Aligned_cols=127 Identities=13% Similarity=0.087 Sum_probs=109.1
Q ss_pred HHHhhhhhhhhhhcc--CceEecCCCCHHHHHHHHHhcCCcEEEEEeCC-CeEEEEEeHHHHHHHHhhccCCCCCCCCcc
Q 007694 412 EMLLEELKVSRAMSK--DFVKVALTVTLKEAIESMKDGQQNCVLVVNGE-DFLEGILTYGDIKRCLSKLSSDNSKGDSIA 488 (593)
Q Consensus 412 ~~~l~~i~v~~~M~~--~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~-~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~ 488 (593)
...+..++|+++|++ ++.++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|++..+.+..
T Consensus 30 ~l~l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~~---------- 99 (173)
T 3ocm_A 30 VLTLAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEG---------- 99 (173)
T ss_dssp HHHHTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS----------
T ss_pred HhccCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcCC----------
Confidence 345778999999974 68899999999999999999999999999986 89999999999998764432
Q ss_pred ccccccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHH
Q 007694 489 SDVNTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLR 568 (593)
Q Consensus 489 ~~~~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~ 568 (593)
..+++ ++ +++ .++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++.+.
T Consensus 100 ----~~~v~-~~-~~~---------~~v~~~~~l~~al~~m~~~~~~~~~Vvde--------~g~lvGiIT~~Dil~~l~ 156 (173)
T 3ocm_A 100 ----RVRRN-RL-RDP---------IIVHESIGILRLMDTLKRSRGQLVLVADE--------FGAIEGLVTPIDVFEAIA 156 (173)
T ss_dssp ----SCCGG-GS-BCC---------CEECGGGCHHHHHHHHHHSTTCCEEEECT--------TCCEEEEECHHHHHHHHH
T ss_pred ----cchhH-hc-CCC---------eEECCCCcHHHHHHHHHHcCCeEEEEEeC--------CCCEEEEEeHHHHHHHHh
Confidence 13566 44 433 78999999999999999999999999997 799999999999999887
Q ss_pred HHH
Q 007694 569 EEV 571 (593)
Q Consensus 569 ~~~ 571 (593)
.++
T Consensus 157 ~~i 159 (173)
T 3ocm_A 157 GEF 159 (173)
T ss_dssp CCC
T ss_pred CcC
Confidence 544
No 45
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.63 E-value=7.9e-16 Score=140.52 Aligned_cols=134 Identities=14% Similarity=0.132 Sum_probs=111.1
Q ss_pred Hhhhhhhhhhhcc--CceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccc
Q 007694 414 LLEELKVSRAMSK--DFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDV 491 (593)
Q Consensus 414 ~l~~i~v~~~M~~--~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~ 491 (593)
.+..++++++|++ ++.++++++++.++.+.|.+++++.+||+|++++++|+|+.+|+...+...... .....
T Consensus 7 ~l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~------~~~~~ 80 (157)
T 2emq_A 7 EFMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERI------EFERL 80 (157)
T ss_dssp ---CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSSSB------CGGGG
T ss_pred hHhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhccccc------chHHh
Confidence 3567899999997 889999999999999999999999999999889999999999998875432110 00012
Q ss_pred cccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHHH
Q 007694 492 NTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREEV 571 (593)
Q Consensus 492 ~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~~ 571 (593)
...+++++|.+++ .++++++++.++++.|.+++. +||+|+ +|+++|+||++|+++.+.+..
T Consensus 81 ~~~~v~~~m~~~~---------~~v~~~~~l~~a~~~m~~~~~--l~Vvd~--------~g~~~Giit~~dil~~~~~~~ 141 (157)
T 2emq_A 81 ETMKVEEVMNRNI---------PRLRLDDSLMKAVGLIVNHPF--VCVEND--------DGYFAGIFTRREVLKQLNKQL 141 (157)
T ss_dssp GTCBGGGTCBCCC---------CEEETTSBHHHHHHHHHHSSE--EEEECS--------SSSEEEEEEHHHHHHHHHHTT
T ss_pred cCCcHHHHhCCCC---------ceecCCCcHHHHHHHHhhCCE--EEEEcC--------CCeEEEEEEHHHHHHHHHHHh
Confidence 3458899998766 899999999999999999987 999997 789999999999999987654
Q ss_pred H
Q 007694 572 N 572 (593)
Q Consensus 572 ~ 572 (593)
.
T Consensus 142 ~ 142 (157)
T 2emq_A 142 H 142 (157)
T ss_dssp C
T ss_pred h
Confidence 4
No 46
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.62 E-value=6.3e-16 Score=141.37 Aligned_cols=120 Identities=13% Similarity=0.133 Sum_probs=106.0
Q ss_pred HHhhhhhhhhhhcc--CceEecCCCCHHHHHHHHHhcCCcEEEEEeCCC-eEEEEEeHHHHHHHHhhccCCCCCCCCccc
Q 007694 413 MLLEELKVSRAMSK--DFVKVALTVTLKEAIESMKDGQQNCVLVVNGED-FLEGILTYGDIKRCLSKLSSDNSKGDSIAS 489 (593)
Q Consensus 413 ~~l~~i~v~~~M~~--~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~-~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~ 489 (593)
..+...+++++|++ ++.++++++++.++.+.|.+++++.+||+|+++ +++|+|+.+|+...+.+.
T Consensus 33 ~~l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~------------ 100 (156)
T 3oi8_A 33 LDFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP------------ 100 (156)
T ss_dssp HHHTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG------------
T ss_pred hccCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC------------
Confidence 45778999999997 789999999999999999999999999999874 999999999997764321
Q ss_pred cccccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHH
Q 007694 490 DVNTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIW 564 (593)
Q Consensus 490 ~~~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~ 564 (593)
...+++++|++ + .++++++++.+++++|.+++.+++||+|+ +|+++|+||++|++
T Consensus 101 --~~~~v~~im~~-~---------~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~--------~g~~~Givt~~Dil 155 (156)
T 3oi8_A 101 --EQFHLKSILRP-A---------VFVPEGKSLTALLKEFREQRNHMAIVIDE--------YGGTSGLVTFEDII 155 (156)
T ss_dssp --GGCCHHHHCBC-C---------CEEETTSBHHHHHHHHHHTTCCEEEEECT--------TSSEEEEEEHHHHC
T ss_pred --CcccHHHHcCC-C---------EEECCCCCHHHHHHHHHhcCCeEEEEECC--------CCCEEEEEEHHHhc
Confidence 13578999975 4 78999999999999999999999999997 79999999999985
No 47
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.61 E-value=3.2e-15 Score=140.34 Aligned_cols=142 Identities=13% Similarity=0.147 Sum_probs=112.8
Q ss_pred HHhhhhhhhhhhccC----ceEe--cCCCCHHHHHHHHHhcCCcEEEEE--eCCCeEEEEEeHHHHHHHHhhccCCC--C
Q 007694 413 MLLEELKVSRAMSKD----FVKV--ALTVTLKEAIESMKDGQQNCVLVV--NGEDFLEGILTYGDIKRCLSKLSSDN--S 482 (593)
Q Consensus 413 ~~l~~i~v~~~M~~~----~~~v--~~~~~v~~~~~~l~~~~~~~~pVv--d~~~~lvGiVt~~dL~~~l~~~~~~~--~ 482 (593)
..+...+++++|+++ +.++ ++++++.++.+.|.+++++.+||+ |++++++|+|+.+|+...+....... .
T Consensus 6 ~~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~ 85 (185)
T 2j9l_A 6 EFAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGV 85 (185)
T ss_dssp ---CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCC
T ss_pred hhhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCc
Confidence 346788999999987 7788 999999999999999999999999 77899999999999998765421100 0
Q ss_pred CCC-----------CccccccccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccC
Q 007694 483 KGD-----------SIASDVNTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRK 551 (593)
Q Consensus 483 ~~~-----------~~~~~~~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~ 551 (593)
..+ .........+++++|.+++ .++++++++.+++++|.+++.+++||+| +
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~---------~~v~~~~~l~~a~~~m~~~~~~~l~Vvd---------~ 147 (185)
T 2j9l_A 86 VSTSIIYFTEHSPPLPPYTPPTLKLRNILDLSP---------FTVTDLTPMEIVVDIFRKLGLRQCLVTH---------N 147 (185)
T ss_dssp CTTCEEECSSSCCCCCTTCCCCEECGGGEESSC---------CEEETTSBHHHHHHHHHHHTCSEEEEEE---------T
T ss_pred cccceeecccCCcccccccccCccHHHhhCcCC---------eEeCCCCCHHHHHHHHHhCCCcEEEEEE---------C
Confidence 000 0000123457899998765 8999999999999999999999999998 4
Q ss_pred CeEEEEEehhhHHHHHHHHHH
Q 007694 552 QRIVAILHYDSIWNCLREEVN 572 (593)
Q Consensus 552 ~~lvGiIt~~di~~~~~~~~~ 572 (593)
|+++|+||++|+++.+.+...
T Consensus 148 g~~vGiit~~dll~~l~~~~~ 168 (185)
T 2j9l_A 148 GRLLGIITKKDVLKHIAQMAN 168 (185)
T ss_dssp TEEEEEEEHHHHHHHHHHHCC
T ss_pred CEEEEEEEHHHHHHHHHHhhc
Confidence 899999999999999876543
No 48
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.61 E-value=4.2e-15 Score=135.80 Aligned_cols=125 Identities=18% Similarity=0.266 Sum_probs=107.8
Q ss_pred hhhhhhhc------cCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccc
Q 007694 418 LKVSRAMS------KDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDV 491 (593)
Q Consensus 418 i~v~~~M~------~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~ 491 (593)
.+++|+|+ +++.++++++++.++++.|.+++++.+||+ ++++++|+++.+|+.+.+..... +.
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~-~~~~~~Givt~~dl~~~~~~~~~----------~~ 75 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVV-DGDDIAGIVTERDYARKVVLQER----------SS 75 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEE-SSSSEEEEEEHHHHHHHSGGGTC----------CS
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEe-eCCEEEEEEEHHHHHHHHHhccC----------Cc
Confidence 46999999 556899999999999999999999999995 58999999999999887654332 01
Q ss_pred cccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHHH
Q 007694 492 NTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREEV 571 (593)
Q Consensus 492 ~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~~ 571 (593)
...+++++|.+++ .++++++++.+++++|.+++.+++||+| +|+++|+||++|+++.+.++.
T Consensus 76 ~~~~v~~~m~~~~---------~~v~~~~~l~~~~~~m~~~~~~~lpVvd---------~g~~~Giit~~dil~~l~~~~ 137 (157)
T 4fry_A 76 KATRVEEIMTAKV---------RYVEPSQSTDECMALMTEHRMRHLPVLD---------GGKLIGLISIGDLVKSVIADQ 137 (157)
T ss_dssp SSCBHHHHSBSSC---------CCBCTTSBHHHHHHHHHHHTCSEEEEEE---------TTEEEEEEEHHHHHHHHHTTC
T ss_pred cccCHHHHcCCCC---------cEECCCCcHHHHHHHHHHcCCCEEEEEE---------CCEEEEEEEHHHHHHHHHHHH
Confidence 2468999998866 7899999999999999999999999998 489999999999999887543
No 49
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.57 E-value=7.6e-15 Score=148.02 Aligned_cols=125 Identities=18% Similarity=0.324 Sum_probs=111.2
Q ss_pred hhhhhhhhhhccCceEecCCCCHHHHHHHHHhc-----CCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccc
Q 007694 415 LEELKVSRAMSKDFVKVALTVTLKEAIESMKDG-----QQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIAS 489 (593)
Q Consensus 415 l~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~-----~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~ 489 (593)
....+++++|+++++++++++++.++.+.|.++ ++..+||+|++++++|+|+.+|+...
T Consensus 134 ~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~---------------- 197 (286)
T 2oux_A 134 YEDETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVN---------------- 197 (286)
T ss_dssp SCTTBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTS----------------
T ss_pred CChHHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcC----------------
Confidence 456789999999999999999999999999887 67889999999999999999998643
Q ss_pred cccccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHH
Q 007694 490 DVNTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLRE 569 (593)
Q Consensus 490 ~~~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~ 569 (593)
....+++++|.+++ .++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++.+.+
T Consensus 198 -~~~~~v~~im~~~~---------~~v~~~~~l~ea~~~m~~~~~~~lpVVd~--------~g~lvGiIT~~Dil~~i~~ 259 (286)
T 2oux_A 198 -DDDTLIADILNERV---------ISVHVGDDQEDVAQTIRDYDFLAVPVTDY--------DDHLLGIVTVDDIIDVIDD 259 (286)
T ss_dssp -CTTSBHHHHSBSCC---------CCEETTSBHHHHHHHHHHHTCSEEEEECT--------TCBEEEEEEHHHHHHHHHH
T ss_pred -CCCCcHHHHcCCCC---------eeecCCCCHHHHHHHHHHcCCcEEEEEcC--------CCeEEEEEEHHHHHHHHHH
Confidence 11358999998766 89999999999999999999999999997 7999999999999999987
Q ss_pred HHHh
Q 007694 570 EVNH 573 (593)
Q Consensus 570 ~~~~ 573 (593)
+..+
T Consensus 260 e~~e 263 (286)
T 2oux_A 260 EAAS 263 (286)
T ss_dssp HHHC
T ss_pred HhHH
Confidence 7653
No 50
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.56 E-value=1.2e-14 Score=140.09 Aligned_cols=121 Identities=19% Similarity=0.244 Sum_probs=107.1
Q ss_pred hhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccccccc
Q 007694 416 EELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCL 495 (593)
Q Consensus 416 ~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~~ 495 (593)
...+++++|.+++.++++++++.++.+.|.+++.+.+||+|++++++|+|+.+|+...+. ..+
T Consensus 11 ~~~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~~-----------------~~~ 73 (213)
T 1vr9_A 11 HHMKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLDL-----------------DSS 73 (213)
T ss_dssp --CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSCT-----------------TSB
T ss_pred cccCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhcC-----------------CCc
Confidence 345789999999999999999999999999999999999998899999999999865421 247
Q ss_pred hhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHH
Q 007694 496 VSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREE 570 (593)
Q Consensus 496 V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~ 570 (593)
++++|.+++ .++++++++.+++++|.+++.+++||+|+ +|+++|+||++|+++.+...
T Consensus 74 v~~im~~~~---------~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--------~g~lvGiit~~Dil~~~~~~ 131 (213)
T 1vr9_A 74 VFNKVSLPD---------FFVHEEDNITHALLLFLEHQEPYLPVVDE--------EMRLKGAVSLHDFLEALIEA 131 (213)
T ss_dssp SGGGCBCTT---------CCEETTSBHHHHHHHHHHCCCSEEEEECT--------TCBEEEEEEHHHHHHHHHHS
T ss_pred HHHHccCCC---------EEECCCCcHHHHHHHHHHhCCCEEEEEcC--------CCEEEEEEEHHHHHHHHHHH
Confidence 899998766 89999999999999999999999999997 69999999999999987643
No 51
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.56 E-value=1.6e-14 Score=142.31 Aligned_cols=136 Identities=21% Similarity=0.285 Sum_probs=103.2
Q ss_pred hhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCC---------------
Q 007694 417 ELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDN--------------- 481 (593)
Q Consensus 417 ~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~--------------- 481 (593)
..+++|+|++++.++++++++.++++.|.+++++.+||+|++++++|+++.+|+.+.+.......
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v~~~ 85 (245)
T 3l2b_A 6 KLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDIWDSNILAKSATSLDNILDT 85 (245)
T ss_dssp CCBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHHHHH
T ss_pred cCcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHHHHH
Confidence 35799999999999999999999999999999999999999899999999999998764322100
Q ss_pred --------------CCC----------------------------------------------CCc--------------
Q 007694 482 --------------SKG----------------------------------------------DSI-------------- 487 (593)
Q Consensus 482 --------------~~~----------------------------------------------~~~-------------- 487 (593)
..+ +..
T Consensus 86 l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~~~~~ 165 (245)
T 3l2b_A 86 LSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAKKNNI 165 (245)
T ss_dssp TTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHHHHTC
T ss_pred hCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHcCC
Confidence 000 000
Q ss_pred -----ccc--------ccccchhhhhc-cCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCe
Q 007694 488 -----ASD--------VNTCLVSSICT-RGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQR 553 (593)
Q Consensus 488 -----~~~--------~~~~~V~dim~-~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~ 553 (593)
..| ....+++++|+ +++ .++++++++.+++++|.+++++++||+|+ +|+
T Consensus 166 ~~i~t~~d~~~~~~~~~~~~~v~~im~~~~~---------~~~~~~~~~~~~~~~m~~~~~~~~pVvd~--------~~~ 228 (245)
T 3l2b_A 166 TVITTPHDSFTASRLIVQSLPVDYVMTKDNL---------VAVSTDDLVEDVKVTMSETRYSNYPVIDE--------NNK 228 (245)
T ss_dssp EEEECSSCHHHHHHHGGGGSBHHHHSBCTTC---------CCEETTSBHHHHHHHHHHHCCSEEEEECT--------TCB
T ss_pred eEEEeCCChHHHHHHHhcCCceeeEecCCcc---------EEECCCCcHHHHHHHHHhcCCceEEEEcC--------CCe
Confidence 000 01346778887 554 89999999999999999999999999997 799
Q ss_pred EEEEEehhhHHHHHHH
Q 007694 554 IVAILHYDSIWNCLRE 569 (593)
Q Consensus 554 lvGiIt~~di~~~~~~ 569 (593)
++|+||++|+++..++
T Consensus 229 ~~Giit~~dll~~~~~ 244 (245)
T 3l2b_A 229 VVGSIARFHLISTHKK 244 (245)
T ss_dssp EEEEEECC--------
T ss_pred EEEEEEHHHhhchhhc
Confidence 9999999999987653
No 52
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.55 E-value=2.8e-14 Score=144.45 Aligned_cols=136 Identities=17% Similarity=0.151 Sum_probs=115.8
Q ss_pred hhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccccccch
Q 007694 417 ELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCLV 496 (593)
Q Consensus 417 ~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~~V 496 (593)
..+++++|++++.++++++++.++.+.|.+++.+.+||+|++++++|+++.+|+.+.+.+....... ......++
T Consensus 155 ~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~-----~~~~~~~v 229 (296)
T 3ddj_A 155 IFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKAVDKLDP-----DYFYGKVV 229 (296)
T ss_dssp CCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHHHHTCT-----HHHHTCBH
T ss_pred cccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHHhhcCh-----hhhcCcCH
Confidence 4589999999999999999999999999999999999999999999999999999886532210000 01124589
Q ss_pred hhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHHHHhh
Q 007694 497 SSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREEVNHR 574 (593)
Q Consensus 497 ~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~~~~~ 574 (593)
+++|.+++ .++++++++.+++++|.+++.+++||+|+ +|+++|+||++|+++++.++..+.
T Consensus 230 ~~~m~~~~---------~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~--------~g~~~Giit~~Dil~~l~~~~~~~ 290 (296)
T 3ddj_A 230 KDVMVTNL---------VTIDELASVNRAAAEMIVKRIGSLLILNK--------DNTIRGIITERDLLIALHHILVME 290 (296)
T ss_dssp HHHSBCCC---------CBCCTTSBHHHHHHHHHHHTCSEEEEECT--------TSCEEEEEEHHHHHHHHHHHHHHH
T ss_pred HHHhCCCC---------eEECCCCcHHHHHHHHHHcCCCEEEEECC--------CCeEEEEEcHHHHHHHHHHHhcch
Confidence 99998866 89999999999999999999999999997 799999999999999998876544
No 53
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.54 E-value=2.5e-14 Score=143.63 Aligned_cols=125 Identities=23% Similarity=0.345 Sum_probs=107.4
Q ss_pred HhhhhhhhhhhccCceEecCCCCHHHHHHHHHhc-----CCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCcc
Q 007694 414 LLEELKVSRAMSKDFVKVALTVTLKEAIESMKDG-----QQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIA 488 (593)
Q Consensus 414 ~l~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~-----~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~ 488 (593)
.+...+++++|++++.++++++++.++.+.+.++ +...+||+|++++++|+|+.+|+...
T Consensus 131 ~~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~--------------- 195 (278)
T 2yvy_A 131 RYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA--------------- 195 (278)
T ss_dssp HSCTTBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS---------------
T ss_pred CCCcchHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC---------------
Confidence 4456789999999999999999999999999876 67899999988999999999998753
Q ss_pred ccccccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHH
Q 007694 489 SDVNTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLR 568 (593)
Q Consensus 489 ~~~~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~ 568 (593)
....+++++|.+++ .+|++++++.+++++|.+++.+.+||||+ +|+++|+||.+|+++.+.
T Consensus 196 --~~~~~v~~im~~~~---------~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--------~g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 196 --DPRTRVAEIMNPKV---------VYVRTDTDQEEVARLMADYDFTVLPVVDE--------EGRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp --CTTCBSTTTSBSSC---------CCEETTSBHHHHHHHHHHHTCSEEEEECT--------TSBEEEEEEHHHHHHHC-
T ss_pred --CCCCcHHHHhCCCC---------eEEeCCCCHHHHHHHHHhcCCCEEEEEeC--------CCeEEEEEEHHHHHHHHH
Confidence 01347899998765 89999999999999999999999999997 799999999999999887
Q ss_pred HHHH
Q 007694 569 EEVN 572 (593)
Q Consensus 569 ~~~~ 572 (593)
++..
T Consensus 257 ~e~~ 260 (278)
T 2yvy_A 257 AEAT 260 (278)
T ss_dssp ----
T ss_pred HHhH
Confidence 6654
No 54
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.50 E-value=6.5e-14 Score=143.58 Aligned_cols=132 Identities=13% Similarity=0.220 Sum_probs=111.8
Q ss_pred hhhhhhh---hccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccccc
Q 007694 417 ELKVSRA---MSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNT 493 (593)
Q Consensus 417 ~i~v~~~---M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~ 493 (593)
..+++++ |++++.++++++++.++.+.|.+++++.+||+|++++++|+|+.+|+.+.+..... +...
T Consensus 186 ~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~----------~~~~ 255 (323)
T 3t4n_C 186 KIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIY----------NDLS 255 (323)
T ss_dssp CSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHHTTHH----------HHTT
T ss_pred hCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHhhchh----------hhcc
Confidence 4578999 99999999999999999999999999999999999999999999999988754321 0124
Q ss_pred cchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHH
Q 007694 494 CLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLRE 569 (593)
Q Consensus 494 ~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~ 569 (593)
.+++++|.+.... ...+.++++++++.+++++|.+++.+++||+|+ +|+++|+||++|+++++..
T Consensus 256 ~~v~~~m~~~~~~---~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~--------~~~l~Giit~~Dil~~l~~ 320 (323)
T 3t4n_C 256 LSVGEALMRRSDD---FEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD--------VGRLVGVLTLSDILKYILL 320 (323)
T ss_dssp SBHHHHGGGSCTT---CCCCEEECTTCBHHHHHHHHHHSCCCEEEEECT--------TSBEEEEEEHHHHHHHHHH
T ss_pred CCHHHHHhhcccc---CCCCEEECCCCCHHHHHHHHHHhCCCEEEEECC--------CCcEEEEEEHHHHHHHHHh
Confidence 5899999873100 012489999999999999999999999999997 7999999999999998864
No 55
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.50 E-value=7.9e-14 Score=150.11 Aligned_cols=126 Identities=23% Similarity=0.340 Sum_probs=111.1
Q ss_pred HHhhhhhhhhhhccCceEecCCCCHHHHHHHHHhc-----CCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCc
Q 007694 413 MLLEELKVSRAMSKDFVKVALTVTLKEAIESMKDG-----QQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSI 487 (593)
Q Consensus 413 ~~l~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~-----~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~ 487 (593)
..+...+++++|++++.+++++++++++.+.++++ +...+||+|++++++|+|+.+|+...
T Consensus 150 l~~~~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~-------------- 215 (473)
T 2zy9_A 150 ARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA-------------- 215 (473)
T ss_dssp HTSCTTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS--------------
T ss_pred hcCCCCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC--------------
Confidence 34466789999999999999999999999999875 46889999998999999999998753
Q ss_pred cccccccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHH
Q 007694 488 ASDVNTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCL 567 (593)
Q Consensus 488 ~~~~~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~ 567 (593)
..+.+++++|++++ .+++++++++++.+.|.+++.+.+||||+ +|+++|+||.+|+++.+
T Consensus 216 ---~~~~~v~dim~~~~---------~~v~~~~~l~ea~~~m~~~~~~~lpVVDe--------~g~lvGiIT~~Dil~~i 275 (473)
T 2zy9_A 216 ---DPRTRVAEIMNPKV---------VYVRTDTDQEEVARLMADYDFTVLPVVDE--------EGRLVGIVTVDDVLDVL 275 (473)
T ss_dssp ---CTTSBGGGTSBSSC---------CCEESSSBHHHHHHHHHHHTCSEEEEECT--------TSBEEEEEEHHHHHHHH
T ss_pred ---CCCCcHHHHhCCCC---------eEEeCCCcHHHHHHHHHhcCCcEEEEEcC--------CCEEEEEEehHhhHHHH
Confidence 11358999998766 89999999999999999999999999997 79999999999999998
Q ss_pred HHHHH
Q 007694 568 REEVN 572 (593)
Q Consensus 568 ~~~~~ 572 (593)
.++..
T Consensus 276 ~~e~~ 280 (473)
T 2zy9_A 276 EAEAT 280 (473)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 87654
No 56
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.49 E-value=1.1e-13 Score=139.92 Aligned_cols=127 Identities=24% Similarity=0.246 Sum_probs=112.7
Q ss_pred hhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccccccc
Q 007694 416 EELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCL 495 (593)
Q Consensus 416 ~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~~ 495 (593)
...+++++|++++.++.+++++.++++.|.+++++.+||+|++++++|+++.+|+...+..... ..+
T Consensus 91 ~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~dl~~~~~~~~~-------------~~~ 157 (296)
T 3ddj_A 91 STTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYKDLDE-------------IFP 157 (296)
T ss_dssp HTSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHGGGGGGSCC-------------CCB
T ss_pred hcccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHhhhcccc-------------ccc
Confidence 3568999999999999999999999999999999999999999999999999999876543221 348
Q ss_pred hhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHHHH
Q 007694 496 VSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREEVN 572 (593)
Q Consensus 496 V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~~~ 572 (593)
++++|.+++ .++++++++.++++.|.+++.+.+||+|+ +|+++|+||++|+++.+.+...
T Consensus 158 v~~~m~~~~---------~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~--------~~~~~Givt~~dl~~~~~~~~~ 217 (296)
T 3ddj_A 158 VKVFMSTKV---------QTIYKEVRLDQAVKLMLRRGFRRLPVIDD--------DNKVVGIVTVVNAIKQLAKAVD 217 (296)
T ss_dssp HHHHSBCSC---------CCEETTSBHHHHHHHHHHHTCSEEEEECT--------TSCEEEEEEHHHHHHHHHHHHH
T ss_pred HHHhhcCCC---------eEECCCCCHHHHHHHHHHcCCCEEEEEcC--------CCEEEEEEEHHHHHHHHHHHHh
Confidence 999998766 88999999999999999999999999997 7999999999999998875443
No 57
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.47 E-value=1.1e-13 Score=151.48 Aligned_cols=132 Identities=11% Similarity=0.084 Sum_probs=111.6
Q ss_pred HHhhhhhhhhhhccCceEecCC-CCHHHHHHHHHhcCCcEEEEEe-CCCeEEEEEeHHHHHHHHhhccCCCCCCCCcccc
Q 007694 413 MLLEELKVSRAMSKDFVKVALT-VTLKEAIESMKDGQQNCVLVVN-GEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASD 490 (593)
Q Consensus 413 ~~l~~i~v~~~M~~~~~~v~~~-~~v~~~~~~l~~~~~~~~pVvd-~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~ 490 (593)
..+...+|+++|++++.++.++ +++.++++.|.+++++.+||+| ++++++|+|+.+||++.+.....
T Consensus 379 ~~l~~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~----------- 447 (527)
T 3pc3_A 379 HWWWSLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNR----------- 447 (527)
T ss_dssp CTTTTSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCC-----------
T ss_pred ccccCCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccC-----------
Confidence 3467889999999999999999 9999999999999999999999 78999999999999988655322
Q ss_pred ccccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHH
Q 007694 491 VNTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREE 570 (593)
Q Consensus 491 ~~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~ 570 (593)
....+|+++|.+++ .++++++++.+++++|.+++. +||||++. ..+++++|+||++|+++.+.+.
T Consensus 448 ~~~~~V~~im~~~~---------~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~----~~~g~lvGIVT~~Dll~~l~~~ 512 (527)
T 3pc3_A 448 QQSDPAIKALNKRV---------IRLNESEILGKLARVLEVDPS--VLILGKNP----AGKVELKALATKLDVTTFIAAG 512 (527)
T ss_dssp CTTSBGGGGEETTC---------CEEETTSBHHHHHHHHTTCSE--EEEEEECS----SSCEEEEEEEEHHHHHHHHHTC
T ss_pred cCCCcHHHHhcCCC---------eEECCCCcHHHHHHHHhhCCE--EEEEeCCc----ccCCeEEEEEEHHHHHHHHHhc
Confidence 12458999998876 899999999999999977765 79999610 0028999999999999998743
No 58
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.46 E-value=5.3e-14 Score=140.82 Aligned_cols=132 Identities=20% Similarity=0.260 Sum_probs=107.8
Q ss_pred hhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccccccchh
Q 007694 418 LKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCLVS 497 (593)
Q Consensus 418 i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~~V~ 497 (593)
.+++++|++++.++++++++.++.+.|.+++.+.+||+ ++++++|+|+.+|+.+.+.+.............+....+++
T Consensus 148 ~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~v~ 226 (280)
T 3kh5_A 148 EVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLLGSDWAFNHMQTGNVREITNVRME 226 (280)
T ss_dssp CBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHHTSHHHHHHHHSCCTHHHHHCBHH
T ss_pred CCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHHhhhhhhhhhcccchhhhhCCcHH
Confidence 47899999999999999999999999999999999999 57899999999999988643221000000000112346899
Q ss_pred hhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHH
Q 007694 498 SICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCL 567 (593)
Q Consensus 498 dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~ 567 (593)
++|.+++ .++++++++.+|++.|.+++.+++||+|+ +|+++|+||++|+++++
T Consensus 227 ~~m~~~~---------~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~--------~g~~~Givt~~dil~~l 279 (280)
T 3kh5_A 227 EIMKRDV---------ITAKEGDKLKKIAEIMVTNDIGALPVVDE--------NLRIKGIITEKDVLKYF 279 (280)
T ss_dssp HHSBSSC---------CCBCTTCBHHHHHHHHHHHTCCEEEEECT--------TCBEEEEEEHHHHGGGG
T ss_pred HHhcCCC---------EEECCCCCHHHHHHHHHHCCCCEEEEECC--------CCeEEEEEeHHHHHHhh
Confidence 9998766 89999999999999999999999999997 78999999999998754
No 59
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.45 E-value=5.6e-13 Score=133.30 Aligned_cols=123 Identities=22% Similarity=0.337 Sum_probs=109.3
Q ss_pred hhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccccccch
Q 007694 417 ELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCLV 496 (593)
Q Consensus 417 ~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~~V 496 (593)
+.+++++|++++.++++++++.++++.|.+++++.+||+|++++++|+++.+|+.+.+..... ...++
T Consensus 83 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~------------~~~~v 150 (280)
T 3kh5_A 83 NEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKID------------ENEVI 150 (280)
T ss_dssp TSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGSC------------TTCBS
T ss_pred hhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcCC------------CCCCH
Confidence 458999999999999999999999999999999999999999999999999999888654432 12378
Q ss_pred hhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHH
Q 007694 497 SSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLRE 569 (593)
Q Consensus 497 ~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~ 569 (593)
+++|.+++ .++++++++.++++.|.+++.+.+||++ +|+++|+||++|+++.+.+
T Consensus 151 ~~~m~~~~---------~~v~~~~~l~~~~~~~~~~~~~~~~Vv~---------~~~~~Givt~~dl~~~~~~ 205 (280)
T 3kh5_A 151 DDYITRDV---------IVATPGERLKDVARTMVRNGFRRLPVVS---------EGRLVGIITSTDFIKLLGS 205 (280)
T ss_dssp GGGCBCSC---------CCBCTTCBHHHHHHHHHHHTCSEEEEEE---------TTEEEEEEEHHHHHHHHTS
T ss_pred HHHhCCCC---------eEECCCCcHHHHHHHHHHcCCCEEEEEE---------CCEEEEEEEHHHHHHHHhh
Confidence 89998765 7899999999999999999999999995 6899999999999988753
No 60
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.45 E-value=7.6e-14 Score=139.98 Aligned_cols=135 Identities=19% Similarity=0.231 Sum_probs=106.2
Q ss_pred hhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHH------HHHhhcc---CC-------
Q 007694 417 ELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIK------RCLSKLS---SD------- 480 (593)
Q Consensus 417 ~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~------~~l~~~~---~~------- 480 (593)
..+++++|++++.++++++++.++.+.|.+++.+.+||+|++++++|+++.+|+. +.+..+. ..
T Consensus 125 ~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (282)
T 2yzq_A 125 GVEIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLRDSEIVRIMKSTELAASSEEEWILE 204 (282)
T ss_dssp GCBSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGGCGGGCC------------------
T ss_pred cCcHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhhhhhhhhhhccchhhhhhhhhhhcc
Confidence 5678999999999999999999999999999999999999889999999999997 4332000 00
Q ss_pred CCCCC---CccccccccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEE
Q 007694 481 NSKGD---SIASDVNTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAI 557 (593)
Q Consensus 481 ~~~~~---~~~~~~~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGi 557 (593)
..... ....+....+++++|.+++ .++++++++.+|+++|.+++.+++||+|+ +|+++|+
T Consensus 205 ~~~~~~~~~~~~~~~~~~v~~im~~~~---------~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--------~~~lvGi 267 (282)
T 2yzq_A 205 SHPTLLFEKFELQLPNKPVAEIMTRDV---------IVATPHMTVHEVALKMAKYSIEQLPVIRG--------EGDLIGL 267 (282)
T ss_dssp --------------CCCBGGGTCBSSC---------CCBCTTSBHHHHHHHHHHHTCSEEEEEET--------TTEEEEE
T ss_pred cchHHHHhHhhhhhccCCHHHhcCCCC---------ceeCCCCCHHHHHHHHHHcCcceeEEECC--------CCCEEEE
Confidence 00000 0001123468999998766 89999999999999999999999999996 6899999
Q ss_pred EehhhHHHHHH
Q 007694 558 LHYDSIWNCLR 568 (593)
Q Consensus 558 It~~di~~~~~ 568 (593)
||++|+++.+.
T Consensus 268 it~~Dil~~~~ 278 (282)
T 2yzq_A 268 IRDFDLLKVLV 278 (282)
T ss_dssp EEHHHHGGGGC
T ss_pred EeHHHHHHHHH
Confidence 99999987764
No 61
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.43 E-value=8.4e-13 Score=135.92 Aligned_cols=133 Identities=14% Similarity=0.188 Sum_probs=110.0
Q ss_pred hhhhhh---hhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccccc
Q 007694 417 ELKVSR---AMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNT 493 (593)
Q Consensus 417 ~i~v~~---~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~ 493 (593)
..++++ +|++++.++++++++.++.+.|.+++.+.+||+|++++++|+|+.+|+.+.+..... +...
T Consensus 181 ~~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~----------~~~~ 250 (334)
T 2qrd_G 181 RVPLNQMTIGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQDGDY----------SNLD 250 (334)
T ss_dssp CCBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHHHTTSCG----------GGGG
T ss_pred hCcHHHhCCcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHHhhcccc----------cccc
Confidence 356788 589999999999999999999999999999999988999999999999987654321 1124
Q ss_pred cchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHH
Q 007694 494 CLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREE 570 (593)
Q Consensus 494 ~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~ 570 (593)
.+++++|.+... . -..+.++++++++.+++++|.+++.+++||+|+ +|+++|+||++|+++.+.++
T Consensus 251 ~~v~~~m~~~~~--~-~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~--------~g~l~Giit~~dil~~~~~~ 316 (334)
T 2qrd_G 251 LSVGEALLKRPA--N-FDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDE--------NLKLEGILSLADILNYIIYD 316 (334)
T ss_dssp SBHHHHHTTCCT--T-CCCCCEECTTCBHHHHHHHHHHSCCCEEEEECT--------TCBEEEEEEHHHHHHHHHSC
T ss_pred CcHHHHHhcccc--c-CCCCEEECCCCcHHHHHHHHHHcCCCEEEEECC--------CCeEEEEEeHHHHHHHHHhc
Confidence 578999985100 0 012389999999999999999999999999997 78999999999999988644
No 62
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.36 E-value=2.4e-12 Score=139.42 Aligned_cols=121 Identities=19% Similarity=0.221 Sum_probs=106.3
Q ss_pred hhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeC--CCeEEEEEeHHHHHHHHhhccCCCCCCCCccccccc
Q 007694 416 EELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNG--EDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNT 493 (593)
Q Consensus 416 ~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~--~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~ 493 (593)
.-++.++.|.+++.++++++++.++.+.|.+++++.+||+|+ +++++|+|+.+|++.. . ..+
T Consensus 111 ~V~~~~~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~----~------------~~~ 174 (511)
T 3usb_A 111 KVKRSESGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFI----Q------------DYS 174 (511)
T ss_dssp HHHTSSSCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTC----C------------CSS
T ss_pred HhhccccccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhh----c------------cCC
Confidence 345567778889999999999999999999999999999998 8899999999998541 1 124
Q ss_pred cchhhhhcc-CccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHH
Q 007694 494 CLVSSICTR-GISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLRE 569 (593)
Q Consensus 494 ~~V~dim~~-~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~ 569 (593)
.+++++|++ ++ +++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++.+..
T Consensus 175 ~~V~~vM~~~~~---------vtv~~~~~l~eal~~m~~~~i~~lpVVDe--------~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 175 IKISDVMTKEQL---------ITAPVGTTLSEAEKILQKYKIEKLPLVDN--------NGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp SBHHHHCCCCCC---------CCEETTCCHHHHHHHHHHHTCSEEEEECT--------TSBEEEEEEHHHHHHHHHC
T ss_pred CcHHHhcccCCC---------EEECCCCCHHHHHHHHHHcCCCEEEEEeC--------CCCEeeeccHHHHHHhhhc
Confidence 589999997 54 89999999999999999999999999998 8999999999999988764
No 63
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.34 E-value=4.8e-12 Score=130.03 Aligned_cols=143 Identities=15% Similarity=0.132 Sum_probs=110.6
Q ss_pred HHHhhhhhhhhhh--ccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCC-CeEEEEEeHHHHHHHHhhcc--CCCCCCCC
Q 007694 412 EMLLEELKVSRAM--SKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGE-DFLEGILTYGDIKRCLSKLS--SDNSKGDS 486 (593)
Q Consensus 412 ~~~l~~i~v~~~M--~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~-~~lvGiVt~~dL~~~l~~~~--~~~~~~~~ 486 (593)
...+.+.+++|+| ++++.++++++++.++.+.|.+++++.+||+|++ ++++|+++.+|+...+.... ......+.
T Consensus 29 ~~~l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~~~~~~l 108 (330)
T 2v8q_E 29 TTFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSALVQIYEL 108 (330)
T ss_dssp HHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHTTTCCCG
T ss_pred HHHHHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccccchhHH
Confidence 4568889999999 7789999999999999999999999999999987 79999999999988754321 00000000
Q ss_pred cc--ccccccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHH
Q 007694 487 IA--SDVNTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIW 564 (593)
Q Consensus 487 ~~--~~~~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~ 564 (593)
.. ......+++++|.+++ .++++++++.++++.|.+++.+++||+|++ +|+++|+||.+|++
T Consensus 109 ~~~~~~~~~~~~~~im~~~~---------~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-------~~~~~Givt~~dl~ 172 (330)
T 2v8q_E 109 EEHKIETWREVYLQDSFKPL---------VCISPNASLFDAVSSLIRNKIHRLPVIDPE-------SGNTLYILTHKRIL 172 (330)
T ss_dssp GGCBHHHHHHHHSSSSCCCC---------CCBCTTSBHHHHHHHHHHHTCSCEEEECTT-------TCCEEEEECHHHHH
T ss_pred hhccHHHHHHHHhhcccCCc---------eEeCCCCCHHHHHHHHHHCCCCeEEEEeCC-------CCcEEEEEcHHHHH
Confidence 00 0000123445666655 889999999999999999999999999841 37899999999999
Q ss_pred HHHHHH
Q 007694 565 NCLREE 570 (593)
Q Consensus 565 ~~~~~~ 570 (593)
+.+...
T Consensus 173 ~~~~~~ 178 (330)
T 2v8q_E 173 KFLKLF 178 (330)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887643
No 64
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.34 E-value=1.5e-12 Score=133.73 Aligned_cols=131 Identities=14% Similarity=0.147 Sum_probs=105.1
Q ss_pred hhhhh--hc-cCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccccccc
Q 007694 419 KVSRA--MS-KDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCL 495 (593)
Q Consensus 419 ~v~~~--M~-~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~~ 495 (593)
+++++ |+ +++.++++++++.++.+.|.+++.+.+||+|++++++|+|+.+|+.+.+..... +....+
T Consensus 191 ~v~~~~v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~~~~~~~~~----------~~~~~~ 260 (330)
T 2v8q_E 191 SLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTY----------NNLDVS 260 (330)
T ss_dssp BHHHHTCSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTGGGGGSSCC----------CCCSSB
T ss_pred CHHHhcccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHHHHHhcccc----------ccccCc
Confidence 34444 55 788899999999999999999999999999988999999999999876543321 011347
Q ss_pred hhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHH
Q 007694 496 VSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREE 570 (593)
Q Consensus 496 V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~ 570 (593)
++++|.... ...+.+.++++++++.+++++|.+++.+++||+|+ +|+++|+||++|+++++.++
T Consensus 261 v~~~~~~~~---~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~--------~g~l~Giit~~Dil~~~~~~ 324 (330)
T 2v8q_E 261 VTKALQHRS---HYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDE--------HDVVKGIVSLSDILQALVLT 324 (330)
T ss_dssp HHHHGGGCC---SCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECT--------TSBEEEEEEHHHHHHHHHSS
T ss_pred HHHHHhccc---cccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcC--------CCcEEEEEeHHHHHHHHHhh
Confidence 888885210 00123489999999999999999999999999997 79999999999999887644
No 65
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.33 E-value=3.4e-12 Score=127.89 Aligned_cols=121 Identities=24% Similarity=0.278 Sum_probs=101.4
Q ss_pred hhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHH-HHhhccCCCCCCCCcccccccc
Q 007694 416 EELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKR-CLSKLSSDNSKGDSIASDVNTC 494 (593)
Q Consensus 416 ~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~-~l~~~~~~~~~~~~~~~~~~~~ 494 (593)
.+.+++++|.+++.++++++++.++.+.|.+.+.+.+||+|++++++|+++.+|+.+ .+..... ....
T Consensus 58 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~~~~-----------~~~~ 126 (282)
T 2yzq_A 58 DEEQLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKSEK-----------YKGV 126 (282)
T ss_dssp ------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCSG-----------GGGC
T ss_pred ccCCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhccCC-----------cccC
Confidence 357899999999999999999999999999999999999998899999999999988 6543210 1234
Q ss_pred chhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHH
Q 007694 495 LVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIW 564 (593)
Q Consensus 495 ~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~ 564 (593)
+++++|.+++ .++++++++.++.+.|.+++.+++||+|+ +++++|+||.+|++
T Consensus 127 ~v~~~m~~~~---------~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~--------~~~~~Giit~~dl~ 179 (282)
T 2yzq_A 127 EIEPYYQRYV---------SIVWEGTPLKAALKALLLSNSMALPVVDS--------EGNLVGIVDETDLL 179 (282)
T ss_dssp BSTTTSBSCC---------CCEETTSBHHHHHHHHHTCSSSEEEEECT--------TSCEEEEEEGGGGG
T ss_pred cHHHHhCCCC---------EEECCCCCHHHHHHHHHHcCCcEEEEEcC--------CCeEEEEEEHHHHh
Confidence 7888887665 78999999999999999999999999997 78999999999998
No 66
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.32 E-value=9e-12 Score=127.51 Aligned_cols=128 Identities=9% Similarity=0.161 Sum_probs=104.6
Q ss_pred hhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCe-----EEEEEeHHHHHHHHhhccCCCCCCCCcccccc
Q 007694 418 LKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDF-----LEGILTYGDIKRCLSKLSSDNSKGDSIASDVN 492 (593)
Q Consensus 418 i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~-----lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~ 492 (593)
+++.++|.+++.++++++++.++++.|.+++.+.+||+|++++ ++|+++.+|+.+.+...... .+..
T Consensus 114 ~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~--------~~~~ 185 (323)
T 3t4n_C 114 ERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRE--------THFL 185 (323)
T ss_dssp HHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGG--------GGGC
T ss_pred HHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCc--------hhhh
Confidence 4566778899999999999999999999999999999998775 99999999999886543221 0122
Q ss_pred ccchhhh---hccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHH
Q 007694 493 TCLVSSI---CTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLRE 569 (593)
Q Consensus 493 ~~~V~di---m~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~ 569 (593)
..+++++ |.+++ .++++++++.++.+.|.+++.+++||+|+ +|+++|+||++|+++.+.+
T Consensus 186 ~~~v~~~~~~m~~~~---------~~v~~~~~~~~~~~~m~~~~~~~~pVvd~--------~~~~~Giit~~dl~~~~~~ 248 (323)
T 3t4n_C 186 KIPIGDLNIITQDNM---------KSCQMTTPVIDVIQMLTQGRVSSVPIIDE--------NGYLINVYEAYDVLGLIKG 248 (323)
T ss_dssp CSBGGGTTCSBCTTC---------CCBCTTSBHHHHHHHHHHHTCSEEEEECT--------TCBEEEEEETTHHHHHHHT
T ss_pred hCcHHHcCCCCCCCc---------EEECCCCcHHHHHHHHHHcCCCEEEEECC--------CCeEEEEEeHHHHHHHHhh
Confidence 3578888 76655 88999999999999999999999999997 7999999999999998765
Q ss_pred H
Q 007694 570 E 570 (593)
Q Consensus 570 ~ 570 (593)
.
T Consensus 249 ~ 249 (323)
T 3t4n_C 249 G 249 (323)
T ss_dssp T
T ss_pred c
Confidence 4
No 67
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.30 E-value=1.4e-12 Score=140.62 Aligned_cols=119 Identities=17% Similarity=0.135 Sum_probs=91.2
Q ss_pred hhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccccccchh
Q 007694 418 LKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCLVS 497 (593)
Q Consensus 418 i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~~V~ 497 (593)
.+++++|++++.++++++++.++.+.|.+++++.+||+|++++++|+|+.+|++.. . ....+++
T Consensus 89 k~~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~----~------------~~~~~v~ 152 (496)
T 4fxs_A 89 KIFEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFV----T------------DLTKSVA 152 (496)
T ss_dssp HHCCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTC----C------------CTTSBGG
T ss_pred cccccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhc----c------------cCCCcHH
Confidence 45678899999999999999999999999999999999999999999999998521 0 1245899
Q ss_pred hhhc-cCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHH
Q 007694 498 SICT-RGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLR 568 (593)
Q Consensus 498 dim~-~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~ 568 (593)
|+|+ ++ +++++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++...
T Consensus 153 diM~p~~--------~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe--------~G~l~GiIT~~DIl~~~~ 208 (496)
T 4fxs_A 153 AVMTPKE--------RLATVKEGATGAEVQEKMHKARVEKILVVND--------EFQLKGMITAKDFHKAES 208 (496)
T ss_dssp GTSEEGG--------GCCEEECC----CGGGTCC---CCCEEEECT--------TSBCCEEECCC-----CC
T ss_pred HHhcCCC--------CCEEECCCCCHHHHHHHHHHcCCCEEEEEcC--------CCCEEEeehHhHHHHhhc
Confidence 9998 32 1389999999999999999999999999998 899999999999988653
No 68
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.29 E-value=1.6e-11 Score=133.13 Aligned_cols=120 Identities=20% Similarity=0.234 Sum_probs=106.6
Q ss_pred hhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEe--CCCeEEEEEeHHHHHHHHhhccCCCCCCCCcccccccc
Q 007694 417 ELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVN--GEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTC 494 (593)
Q Consensus 417 ~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd--~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~ 494 (593)
-.+++++|++++.++++++++.++.+.|.+++++.+||+| ++++++|+|+.+|++.. . ....
T Consensus 89 v~~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~--~--------------~~~~ 152 (491)
T 1zfj_A 89 VKRSENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFI--S--------------DYNA 152 (491)
T ss_dssp HHHHTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHC--S--------------CSSS
T ss_pred HhhHHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhh--c--------------cCCC
Confidence 3457899999999999999999999999999999999999 78999999999998753 0 1135
Q ss_pred chhhhhcc-CccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHH
Q 007694 495 LVSSICTR-GISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLRE 569 (593)
Q Consensus 495 ~V~dim~~-~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~ 569 (593)
+++++|++ ++ .++++++++.+++++|.+++.+.+||||+ +++++|+||++|+++.+.+
T Consensus 153 ~v~~im~~~~~---------~~v~~~~~l~~a~~~m~~~~~~~lpVVd~--------~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 153 PISEHMTSEHL---------VTAAVGTDLETAERILHEHRIEKLPLVDN--------SGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp BTTTSCCCSCC---------CCEETTCCHHHHHHHHHHTTCSEEEEECT--------TSBEEEEEEHHHHHHHHHC
T ss_pred cHHHHcCCCCC---------EEECCCCCHHHHHHHHHHcCCCEEEEEcC--------CCcEEEEEEHHHHHHHHhc
Confidence 78999986 55 78999999999999999999999999998 8999999999999998773
No 69
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.27 E-value=6.1e-13 Score=144.17 Aligned_cols=129 Identities=20% Similarity=0.181 Sum_probs=7.9
Q ss_pred HHHhhhhhhhhh-hccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCC---CeEEEEEeHHHHHHHHhhccCCCCCCCCc
Q 007694 412 EMLLEELKVSRA-MSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGE---DFLEGILTYGDIKRCLSKLSSDNSKGDSI 487 (593)
Q Consensus 412 ~~~l~~i~v~~~-M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~---~~lvGiVt~~dL~~~l~~~~~~~~~~~~~ 487 (593)
...+..++..+. |++++.++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|++.. ..
T Consensus 90 ~~~v~~V~~~e~gM~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~--~~---------- 157 (503)
T 1me8_A 90 AAMVHAVKNFKAGFVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID--LT---------- 157 (503)
T ss_dssp HHHHHHHHTTTC--------------------------------------------------------------------
T ss_pred HHHHhhhhhcccCcccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh--hc----------
Confidence 345566677777 99999999999999999999999999999999987 899999999999753 10
Q ss_pred cccccccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHH
Q 007694 488 ASDVNTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCL 567 (593)
Q Consensus 488 ~~~~~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~ 567 (593)
....+++|+|+++ .+++++++++++.+++++|.+++.+.+||||+ +++++|+||++|+++.+
T Consensus 158 ---~~~~~V~diM~~~-------~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe--------~g~lvGiIT~~Dil~~~ 219 (503)
T 1me8_A 158 ---QTETKVSDMMTPF-------SKLVTAHQDTKLSEANKIIWEKKLNALPIIDD--------DQHLRYIVFRKDYDRSQ 219 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---cccCcHHHHhCCC-------CCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcC--------CCeEEEEEEecHHHHhh
Confidence 1245899999875 11389999999999999999999999999997 79999999999999887
Q ss_pred HHH
Q 007694 568 REE 570 (593)
Q Consensus 568 ~~~ 570 (593)
...
T Consensus 220 ~~~ 222 (503)
T 1me8_A 220 VCH 222 (503)
T ss_dssp --C
T ss_pred hcc
Confidence 644
No 70
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.23 E-value=1.5e-12 Score=140.31 Aligned_cols=120 Identities=19% Similarity=0.183 Sum_probs=5.0
Q ss_pred hhhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCcccccccc
Q 007694 415 LEELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTC 494 (593)
Q Consensus 415 l~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~ 494 (593)
....+++++|.+++.++++++++.++.+.|.+++++.+||+| +++++|+|+.+|++... ..+.
T Consensus 85 ~~vk~~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~~~~----------------~~~~ 147 (490)
T 4avf_A 85 RKVKKHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLRVKP----------------NAGD 147 (490)
T ss_dssp HHHHHCCC------------------------------------------------------------------------
T ss_pred hhhcccccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhhhcc----------------ccCC
Confidence 334567889999999999999999999999999999999999 88999999999986321 1245
Q ss_pred chhhhhc-c-CccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHH
Q 007694 495 LVSSICT-R-GISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLR 568 (593)
Q Consensus 495 ~V~dim~-~-~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~ 568 (593)
+++++|+ + ++ +++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++...
T Consensus 148 ~V~~vMtp~~~~---------vtv~~~~~l~ea~~~m~~~~i~~lpVVDe--------~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 148 TVAAIMTPKDKL---------VTAREGTPLEEMKAKLYENRIEKMLVVDE--------NFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred cHHHHhccCCCC---------EEECCCCcHHHHHHHHHHcCCCEEEEEcC--------CCcEEEEEehHHhhhhcc
Confidence 8999998 3 34 89999999999999999999999999998 899999999999998764
No 71
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.21 E-value=1.9e-12 Score=140.47 Aligned_cols=121 Identities=25% Similarity=0.372 Sum_probs=8.1
Q ss_pred hhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccccccch
Q 007694 417 ELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCLV 496 (593)
Q Consensus 417 ~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~~V 496 (593)
-.++.++|++++.++++++++.++.+.|.+++++.+||+|++++++|+|+.+|++.. . ....++
T Consensus 94 v~~~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~--~--------------~~~~~v 157 (494)
T 1vrd_A 94 VKKTENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFE--K--------------NLSKKI 157 (494)
T ss_dssp HHTC----------------------------------------------------------------------------
T ss_pred hhhHhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhh--c--------------CCCCcH
Confidence 345789999999999999999999999999999999999988999999999999752 0 123588
Q ss_pred hhhhcc--CccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHH
Q 007694 497 SSICTR--GISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREE 570 (593)
Q Consensus 497 ~dim~~--~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~ 570 (593)
+++|++ ++ .++++++++.+++++|.+++.+.+||||+ +++++|+||++|+++.+..+
T Consensus 158 ~~im~~~~~~---------~~v~~~~~l~ea~~~m~~~~~~~lpVVd~--------~g~lvGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 158 KDLMTPREKL---------IVAPPDISLEKAKEILHQHRIEKLPLVSK--------DNKLVGLITIKDIMSVIEHP 216 (494)
T ss_dssp --------------------------------------------------------------------CHHHHTCT
T ss_pred HHHhCCCCCC---------eEECCCCCHHHHHHHHHHcCCcEEEEEcC--------CCeEEEEEEHHHHHhhhccc
Confidence 999986 55 89999999999999999999999999998 79999999999999887644
No 72
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.20 E-value=2.5e-12 Score=135.34 Aligned_cols=114 Identities=16% Similarity=0.178 Sum_probs=0.9
Q ss_pred hhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeC---CCeEEEEEeHHHHHHHHhhccCCCCCCCCccccccccchh
Q 007694 421 SRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNG---EDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCLVS 497 (593)
Q Consensus 421 ~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~---~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~~V~ 497 (593)
...|..+++++.|+.++.|+.+++.++++..+||+|+ +++++|+||.+|++.. ..+.+|+
T Consensus 141 e~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~-----------------d~~~~V~ 203 (556)
T 4af0_A 141 ENGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ-----------------DAETPIK 203 (556)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred ccCccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc-----------------ccceEhh
Confidence 4457788999999999999999999999999999987 5799999999998542 1245899
Q ss_pred hhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHH
Q 007694 498 SICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLR 568 (593)
Q Consensus 498 dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~ 568 (593)
++|+++. ++++++.++++|.++|.++++..+||||+ +++++|+||++|+.+...
T Consensus 204 evMT~~l---------vt~~~~~~leeA~~iL~~~kieklpVVd~--------~g~LvGlIT~kDi~k~~~ 257 (556)
T 4af0_A 204 SVMTTEV---------VTGSSPITLEKANSLLRETKKGKLPIVDS--------NGHLVSLVARSDLLKNQN 257 (556)
T ss_dssp -----------------------------------------------------------------------
T ss_pred hhcccce---------EEecCCCCHHHHHHHHHHccccceeEEcc--------CCcEEEEEEechhhhhhh
Confidence 9999865 89999999999999999999999999998 899999999999977543
No 73
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.16 E-value=1.4e-10 Score=119.07 Aligned_cols=124 Identities=10% Similarity=0.167 Sum_probs=101.5
Q ss_pred hhhhccCc--eEecCCCCHHHHHHHHHhcCCcEEEEEeCCC-e----EEEEEeHHHHHHHHhhccCCCCCCCCccccccc
Q 007694 421 SRAMSKDF--VKVALTVTLKEAIESMKDGQQNCVLVVNGED-F----LEGILTYGDIKRCLSKLSSDNSKGDSIASDVNT 493 (593)
Q Consensus 421 ~~~M~~~~--~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~-~----lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~ 493 (593)
+++|.+++ .++.+++++.++++.|.+++.+.+||+|+++ + ++|+++.+|+.+.+.....+ .+...
T Consensus 110 ~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~~--------~~~~~ 181 (334)
T 2qrd_G 110 RKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCKE--------TAMLR 181 (334)
T ss_dssp HHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCGG--------GGGCC
T ss_pred HhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhccc--------hhhhh
Confidence 45677776 8999999999999999999999999999765 3 99999999998876542110 01123
Q ss_pred cchhhh---hccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHH
Q 007694 494 CLVSSI---CTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLRE 569 (593)
Q Consensus 494 ~~V~di---m~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~ 569 (593)
.+++++ |.+++ .++++++++.++++.|.+++.+.+||+|+ +|+++|+||++|+++.+.+
T Consensus 182 ~~v~~l~~~m~~~~---------~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~--------~~~~~Giit~~dl~~~~~~ 243 (334)
T 2qrd_G 182 VPLNQMTIGTWSNL---------ATASMETKVYDVIKMLAEKNISAVPIVNS--------EGTLLNVYESVDVMHLIQD 243 (334)
T ss_dssp CBGGGSSCSBCSSC---------CCBCTTSBHHHHHHHHHHHTCSEEEEECT--------TCBEEEEEETHHHHHHHTT
T ss_pred CcHHHhCCcccCCc---------eEECCCCcHHHHHHHHHHcCCcEEEEEcC--------CCcEEEEEEHHHHHHHhhc
Confidence 467774 66655 78999999999999999999999999997 7899999999999987653
No 74
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.03 E-value=5.3e-12 Score=137.56 Aligned_cols=120 Identities=19% Similarity=0.225 Sum_probs=71.0
Q ss_pred hhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeC---CCeEEEEEeHHHHHHHHhhccCCCCCCCCcccccccc
Q 007694 418 LKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNG---EDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTC 494 (593)
Q Consensus 418 i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~---~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~ 494 (593)
.++.++|.+++.++++++++.++.+.|.+++++.+||+|+ +++++|+|+.+|+...... ....
T Consensus 108 ~~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~--------------~~~~ 173 (514)
T 1jcn_A 108 KNFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEK--------------DHTT 173 (514)
T ss_dssp HTCCTTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC-----------------------
T ss_pred hhhhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhc--------------cCCC
Confidence 4678999999999999999999999999999999999998 5899999999998653100 1235
Q ss_pred chhhhhcc--CccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHH
Q 007694 495 LVSSICTR--GISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLR 568 (593)
Q Consensus 495 ~V~dim~~--~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~ 568 (593)
+++++|.+ ++ .++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++.+.
T Consensus 174 ~v~~vm~~~~~~---------~tv~~~~~l~ea~~~m~~~~~~~lpVVd~--------~g~lvGiIt~~Dll~~~~ 232 (514)
T 1jcn_A 174 LLSEVMTPRIEL---------VVAPAGVTLKEANEILQRSKKGKLPIVND--------CDELVAIIARTDLKKNRD 232 (514)
T ss_dssp -------CCBCC---------CCEETTCCSTTTTTHHHHHTCSCCCEESS--------SSCCC----CCCCSSCCC
T ss_pred CHHHHhCCCCCC---------eEECCCCCHHHHHHHHHHcCCCcccEECC--------CCeEEEEEEHHHHHHHhh
Confidence 78999987 55 89999999999999999999999999997 899999999999887654
No 75
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.01 E-value=4.5e-11 Score=129.20 Aligned_cols=115 Identities=21% Similarity=0.325 Sum_probs=2.7
Q ss_pred hhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccccccchh
Q 007694 418 LKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCLVS 497 (593)
Q Consensus 418 i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~~V~ 497 (593)
....+.|..++.++++++++.++.+.|.+++++.+||+|+ ++++|+|+.+|++. . ...+++
T Consensus 93 ~~~~~~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~---~---------------~~~~v~ 153 (486)
T 2cu0_A 93 KRAERLIVEDVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAA---R---------------EGKLVK 153 (486)
T ss_dssp HTCC----------------------------------------------------------------------------
T ss_pred cchhhccccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhcc---C---------------CCCCHH
Confidence 3467889999999999999999999999999999999997 99999999999864 1 124788
Q ss_pred hhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHH
Q 007694 498 SICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLR 568 (593)
Q Consensus 498 dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~ 568 (593)
++|++++ .++++++++.+++++|.+++.+.+||||+ +++++|+||++|+++...
T Consensus 154 ~im~~~~---------~~v~~~~~l~eal~~m~~~~~~~lpVVde--------~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 154 ELMTKEV---------ITVPESIEVEEALKIMIENRIDRLPVVDE--------RGKLVGLITMSDLVARKK 207 (486)
T ss_dssp ----------------------------------------------------------------------C
T ss_pred HHccCCC---------eEECCcCcHHHHHHHHHHcCCCEEEEEec--------CCeEEEEEEHHHHHHhhh
Confidence 9998755 78999999999999999999999999997 799999999999998754
No 76
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.56 E-value=1.7e-07 Score=72.57 Aligned_cols=66 Identities=17% Similarity=0.180 Sum_probs=54.7
Q ss_pred ceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccccccchhhhhccCc
Q 007694 428 FVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCLVSSICTRGI 504 (593)
Q Consensus 428 ~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~~V~dim~~~~ 504 (593)
++++++++++.++.+.|.+++.+.+||+| +++++|++|.+|+.+.+..+.. +..+.+++|+|++++
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~~~~----------~~~~~~V~~iMt~~~ 67 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVVAKGK----------NPKEVKVEEIMTKNP 67 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTTTTC----------CGGGCBGGGTCEECT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHhcCC----------CcccCCHHHhcCCCC
Confidence 56899999999999999999999999998 5899999999999876443322 133568999999875
No 77
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.46 E-value=2.2e-07 Score=88.87 Aligned_cols=102 Identities=19% Similarity=0.111 Sum_probs=56.1
Q ss_pred hhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccccccch
Q 007694 417 ELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCLV 496 (593)
Q Consensus 417 ~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~~V 496 (593)
+.+++++|++++.++++++++.++.+.|.+++.+.+||+|++++++|+|+.+|+.+.+..... .
T Consensus 71 ~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~~~----------------~ 134 (213)
T 1vr9_A 71 DSSVFNKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEALA----------------M 134 (213)
T ss_dssp TSBSGGGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHSCC-----------------
T ss_pred CCcHHHHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHhc----------------C
Confidence 457999999999999999999999999999999999999988999999999999987654321 1
Q ss_pred hhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeec
Q 007694 497 SSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKR 542 (593)
Q Consensus 497 ~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~ 542 (593)
.+.+.+-. +.+.....++.++.+.|.+++.+.++|++.
T Consensus 135 ~~~~~~l~--------~~~~~~~~~l~~~~~~l~~~~~~~l~V~~~ 172 (213)
T 1vr9_A 135 DVPGIRFS--------VLLEDKPGELRKVVDALALSNINILSVITT 172 (213)
T ss_dssp ----------------------------------------------
T ss_pred CCCcEEEE--------EEeCCCCccHHHHHHHHHHCCCcEEEEEEE
Confidence 11111100 011123345999999999999999999865
No 78
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.41 E-value=3.8e-07 Score=70.61 Aligned_cols=46 Identities=9% Similarity=0.208 Sum_probs=42.4
Q ss_pred ceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHH
Q 007694 513 LLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCL 567 (593)
Q Consensus 513 ~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~ 567 (593)
+++++|++++.+|.++|.+++++++||+| +++++|++|.+|+++.+
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d---------~~~lvGIvT~~Di~~~~ 47 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME---------GDEILGVVTERDILDKV 47 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE---------TTEEEEEEEHHHHHHHT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE---------CCEEEEEEEHHHHHHHH
Confidence 47899999999999999999999999998 58999999999998654
No 79
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.37 E-value=1e-06 Score=67.86 Aligned_cols=66 Identities=18% Similarity=0.217 Sum_probs=54.7
Q ss_pred ceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhccCCCCCCCCccccccccchhhhhccCc
Q 007694 428 FVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCLVSSICTRGI 504 (593)
Q Consensus 428 ~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~~~~~~~~~~~~~~~~~~V~dim~~~~ 504 (593)
+.++++++++.++.+.|.+++++.+||+|+ ++++|+|+.+|+.+.+..+.. +....+++++|++++
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~~~~----------~~~~~~v~~im~~~~ 67 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVAKGK----------NPKEVKVEEIMTKNP 67 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTTTTC----------CGGGCBGGGTCEECT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHcCC----------CcccCCHHHhcCCCC
Confidence 567899999999999999999999999997 999999999999988644321 122458999998764
No 80
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.34 E-value=3e-07 Score=84.48 Aligned_cols=57 Identities=19% Similarity=0.257 Sum_probs=52.6
Q ss_pred ccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHH
Q 007694 493 TCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNC 566 (593)
Q Consensus 493 ~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~ 566 (593)
..+|+|+|++++ +++++++++.+|++.|.+++++++||+|+ +|+++|+||.+|+++.
T Consensus 17 ~~~V~diM~~~v---------~~v~~~~tl~~a~~~m~~~~~~~~pVvd~--------~g~lvGiit~~Dll~~ 73 (170)
T 4esy_A 17 QVPIRDILTSPV---------VTVREDDTLDAVAKTMLEHQIGCAPVVDQ--------NGHLVGIITESDFLRG 73 (170)
T ss_dssp TSBGGGGCCSCC---------CCEETTSBHHHHHHHHHHTTCSEEEEECT--------TSCEEEEEEGGGGGGG
T ss_pred CCCHHHhcCCCC---------cEECCcCcHHHHHHHHHHcCCeEEEEEcC--------CccEEEEEEHHHHHHH
Confidence 458999999876 89999999999999999999999999997 8999999999999764
No 81
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.27 E-value=1.1e-06 Score=85.99 Aligned_cols=66 Identities=9% Similarity=0.198 Sum_probs=57.7
Q ss_pred ccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHHHH
Q 007694 493 TCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREEVN 572 (593)
Q Consensus 493 ~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~~~ 572 (593)
..+|+|+|.+++ +++.+++++.++.++|.+++++.+||||+++ +++++|+||++|+++++.....
T Consensus 12 ~~~v~diMt~~v---------vtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~------~~~LvGiIt~~dl~~~l~~~~~ 76 (250)
T 2d4z_A 12 NIQVGDIMVRDV---------TSIASTSTYGDLLHVLRQTKLKFFPFVDTPD------TNTLLGSIDRTEVEGLLQRRIS 76 (250)
T ss_dssp SCBTTSSSBSSC---------CCEETTCBHHHHHHHHHHCCCSEEEEESCTT------TCBEEEEEEHHHHHHHHHHHHH
T ss_pred CCChHHhcCCCC---------eEECCCCCHHHHHHHHHhcCCCEEEEEecCC------CCeEEEEEEHHHHHHHHHHhhh
Confidence 468999999876 8999999999999999999999999999632 4789999999999998876654
Q ss_pred h
Q 007694 573 H 573 (593)
Q Consensus 573 ~ 573 (593)
.
T Consensus 77 ~ 77 (250)
T 2d4z_A 77 A 77 (250)
T ss_dssp T
T ss_pred h
Confidence 3
No 82
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.20 E-value=2.3e-06 Score=76.48 Aligned_cols=62 Identities=15% Similarity=0.342 Sum_probs=55.0
Q ss_pred cccchhhhhcc--CccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccC-CeEEEEEehhhHHHHHH
Q 007694 492 NTCLVSSICTR--GISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRK-QRIVAILHYDSIWNCLR 568 (593)
Q Consensus 492 ~~~~V~dim~~--~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~-~~lvGiIt~~di~~~~~ 568 (593)
...+++|+|.+ ++ .++++++++.+|.+.|.+++.+++||+|+ + ++++|+||.+|+++.+.
T Consensus 21 ~~~~v~diM~~~~~~---------~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--------~~~~lvGivt~~dl~~~~~ 83 (148)
T 3lv9_A 21 EEKKIREIMVPRTDM---------VCIYESDSEEKILAILKEEGVTRYPVCRK--------NKDDILGFVHIRDLYNQKI 83 (148)
T ss_dssp GTCBGGGTSEETTTC---------CCEETTCCHHHHHHHHHHSCCSEEEEESS--------STTSEEEEEEHHHHHHHHH
T ss_pred CCCCHHHccccHHHe---------EEECCCCCHHHHHHHHHHCCCCEEEEEcC--------CCCcEEEEEEHHHHHHHHh
Confidence 35689999997 55 88999999999999999999999999996 5 79999999999998875
Q ss_pred HH
Q 007694 569 EE 570 (593)
Q Consensus 569 ~~ 570 (593)
+.
T Consensus 84 ~~ 85 (148)
T 3lv9_A 84 NE 85 (148)
T ss_dssp HH
T ss_pred cC
Confidence 43
No 83
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.17 E-value=1.2e-06 Score=85.60 Aligned_cols=60 Identities=20% Similarity=0.321 Sum_probs=54.8
Q ss_pred ccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHH
Q 007694 493 TCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLRE 569 (593)
Q Consensus 493 ~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~ 569 (593)
..+|+|+|.+++ .++++++++.+|+++|.+++++++||+|+ +|+++|+||.+|+.+.+.+
T Consensus 6 ~~~v~~im~~~~---------~~v~~~~~~~~a~~~m~~~~~~~lpVvd~--------~~~l~Giit~~di~~~~~~ 65 (245)
T 3l2b_A 6 KLKVEDLEMDKI---------APLAPEVSLKMAWNIMRDKNLKSIPVADG--------NNHLLGMLSTSNITATYMD 65 (245)
T ss_dssp CCBGGGSCCBCC---------CCBCTTCBHHHHHHHHHHTTCSEEEEECT--------TCBEEEEEEHHHHHHHHHC
T ss_pred cCcHHHhcCCCC---------cEECCCCcHHHHHHHHHHcCCCEEEEEcC--------CCEEEEEEEHHHHHHHHHH
Confidence 458999998876 89999999999999999999999999997 7999999999999988753
No 84
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.14 E-value=2e-06 Score=79.07 Aligned_cols=61 Identities=11% Similarity=0.103 Sum_probs=51.9
Q ss_pred ccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccC-CeEEEEEehhhHHHHHH
Q 007694 493 TCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRK-QRIVAILHYDSIWNCLR 568 (593)
Q Consensus 493 ~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~-~~lvGiIt~~di~~~~~ 568 (593)
..+++|+|.+.. .+.++++++++.+|++.|.+++.+.+||+|+ + ++++|+||.+|+++...
T Consensus 41 ~~~v~diM~~~~-------~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~--------~~~~lvGivt~~dl~~~~~ 102 (172)
T 3lhh_A 41 ERTISSLMVPRS-------DIVFLDLNLPLDANLRTVMQSPHSRFPVCRN--------NVDDMVGIISAKQLLSESI 102 (172)
T ss_dssp --CTTTTSEEGG-------GCCCEETTSCHHHHHHHHHTCCCSEEEEESS--------STTSEEEEEEHHHHHHHHH
T ss_pred CCCHHHhCccHH-------HeEEEcCCCCHHHHHHHHHhCCCCEEEEEeC--------CCCeEEEEEEHHHHHHHHh
Confidence 468999998421 2378999999999999999999999999996 5 89999999999998765
No 85
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.13 E-value=2.5e-06 Score=73.23 Aligned_cols=58 Identities=21% Similarity=0.364 Sum_probs=52.7
Q ss_pred chhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHH
Q 007694 495 LVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLRE 569 (593)
Q Consensus 495 ~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~ 569 (593)
+++|+|.+++ .++++++++.++.+.|.+++.+.+||+|+ +++++|+||.+|+.+.+.+
T Consensus 2 ~v~~im~~~~---------~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--------~~~~~G~vt~~dl~~~~~~ 59 (122)
T 3kpb_A 2 LVKDILSKPP---------ITAHSNISIMEAAKILIKHNINHLPIVDE--------HGKLVGIITSWDIAKALAQ 59 (122)
T ss_dssp BHHHHCCSCC---------CCEETTSBHHHHHHHHHHHTCSCEEEECT--------TSBEEEEECHHHHHHHHHT
T ss_pred chHHhhCCCC---------EEeCCCCcHHHHHHHHHHcCCCeEEEECC--------CCCEEEEEEHHHHHHHHHh
Confidence 6788998866 88999999999999999999999999997 7999999999999987653
No 86
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.10 E-value=3.2e-06 Score=76.50 Aligned_cols=61 Identities=15% Similarity=0.178 Sum_probs=52.6
Q ss_pred cchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHH
Q 007694 494 CLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLRE 569 (593)
Q Consensus 494 ~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~ 569 (593)
.+++++|.+. .++.++++++++.+|+++|.+++++++||+|+ +++++|+||.+|+++++.+
T Consensus 15 ~~~~~iM~P~-------~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~--------~~~lvGiit~~Di~~~~~~ 75 (156)
T 3k6e_A 15 GQEETFLTPA-------KNLAVLIDTHNADHATLLLSQMTYTRVPVVTD--------EKQFVGTIGLRDIMAYQME 75 (156)
T ss_dssp TTGGGGEEET-------TSSCCEETTSBHHHHHHHHTTSSSSEEEEECC---------CBEEEEEEHHHHHHHHHH
T ss_pred ccHHHhCcch-------hHeEEECCcCCHHHHHHHHHHcCCcEEEEEcC--------CCcEEEEEEecchhhhhhh
Confidence 4678888863 24589999999999999999999999999997 7899999999999987754
No 87
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.09 E-value=4.4e-06 Score=74.69 Aligned_cols=58 Identities=14% Similarity=0.090 Sum_probs=53.1
Q ss_pred cchhhhhcc--CccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHH
Q 007694 494 CLVSSICTR--GISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLR 568 (593)
Q Consensus 494 ~~V~dim~~--~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~ 568 (593)
.+++|+|.+ ++ .++++++++.+|.+.|.+++.+.+||+|+ +|+++|+||.+|+.+.+.
T Consensus 28 ~~v~dim~~~~~~---------~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~--------~~~~~Givt~~dl~~~~~ 87 (149)
T 3k2v_A 28 LRVNDIMHTGDEI---------PHVGLQATLRDALLEITRKNLGMTAICDD--------DMNIIGIFTDGDLRRVFD 87 (149)
T ss_dssp SBGGGTSBCGGGS---------CEECTTCBHHHHHHHHHHHTSSEEEEECT--------TCBEEEEEEHHHHHHHHC
T ss_pred cCHHHHhcCCCCC---------eEECCCCcHHHHHHHHHhCCCcEEEEECC--------CCcEEEEecHHHHHHHHh
Confidence 489999987 55 89999999999999999999999999997 789999999999998764
No 88
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.08 E-value=5.3e-06 Score=63.72 Aligned_cols=47 Identities=9% Similarity=0.189 Sum_probs=43.2
Q ss_pred ceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHH
Q 007694 513 LLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLR 568 (593)
Q Consensus 513 ~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~ 568 (593)
+.++++++++.++++.|.+++.+.+||+| +++++|+||.+|+++.+.
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d---------~~~l~Givt~~dl~~~~~ 48 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME---------GDEILGVVTERDILDKVV 48 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE---------TTEEEEEEEHHHHHHHTT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEE---------CCEEEEEEEHHHHHHHHH
Confidence 36889999999999999999999999999 489999999999998764
No 89
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.03 E-value=7.3e-06 Score=72.37 Aligned_cols=58 Identities=12% Similarity=0.104 Sum_probs=52.6
Q ss_pred cchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCC--eEEEEEehhhHHHHHH
Q 007694 494 CLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQ--RIVAILHYDSIWNCLR 568 (593)
Q Consensus 494 ~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~--~lvGiIt~~di~~~~~ 568 (593)
.+++|+|.+++ .++++++++.++.+.|.+++.+.+||+|+ ++ +++|+||.+|+.+.+.
T Consensus 5 ~~v~~im~~~~---------~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--------~~~~~~~Givt~~dl~~~~~ 64 (141)
T 2rih_A 5 IRTSELLKRPP---------VSLPETATIREVATELAKNRVGLAVLTAR--------DNPKRPVAVVSERDILRAVA 64 (141)
T ss_dssp CBGGGGCCSCC---------EEEETTCBHHHHHHHHHHHTCSEEEEEET--------TEEEEEEEEEEHHHHHHHHH
T ss_pred eEHHHHhcCCC---------eEeCCCCcHHHHHHHHHHcCCCEEEEEcC--------CCcceeEEEEEHHHHHHHHh
Confidence 47889998766 89999999999999999999999999997 66 9999999999998764
No 90
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.03 E-value=2.6e-06 Score=73.96 Aligned_cols=59 Identities=17% Similarity=0.221 Sum_probs=51.3
Q ss_pred cchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccC-CeEEEEEehhhHHHHH
Q 007694 494 CLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRK-QRIVAILHYDSIWNCL 567 (593)
Q Consensus 494 ~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~-~~lvGiIt~~di~~~~ 567 (593)
.+++|+|.+. .++.++++++++.+|.+.|.+++.+++||+|+ + ++++|+||.+|+.+.+
T Consensus 3 ~~v~diM~~~-------~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--------~~~~~vGivt~~dl~~~~ 62 (127)
T 3nqr_A 3 QRVRDIMIPR-------SQMITLKRNQTLDECLDVIIESAHSRFPVISE--------DKDHIEGILMAKDLLPFM 62 (127)
T ss_dssp CBHHHHSEEG-------GGCCCEETTCCHHHHHHHHHHHCCSEEEEESS--------STTCEEEEEEGGGGGGGG
T ss_pred cCHHHhcccH-------HHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcC--------CCCcEEEEEEHHHHHHHH
Confidence 4789999864 12378999999999999999999999999997 5 7999999999998765
No 91
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.02 E-value=6.8e-06 Score=74.49 Aligned_cols=59 Identities=24% Similarity=0.344 Sum_probs=53.5
Q ss_pred cchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHH
Q 007694 494 CLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLRE 569 (593)
Q Consensus 494 ~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~ 569 (593)
.+++|+|.+++ .++++++++.+|+++|.+.+.+.+||+|+ +++++|+||.+|+++.+..
T Consensus 5 ~~v~dim~~~~---------~~v~~~~tl~~a~~~m~~~~~~~~pVvd~--------~~~lvGivt~~dl~~~~~~ 63 (160)
T 2o16_A 5 IKVEDMMTRHP---------HTLLRTHTLNDAKHLMEALDIRHVPIVDA--------NKKLLGIVSQRDLLAAQES 63 (160)
T ss_dssp CBGGGTSEESC---------CCBCTTSBHHHHHHHHHHHTCSEEEEECT--------TCBEEEEEEHHHHHHHHHH
T ss_pred CcHHHHhcCCC---------eEECCCCcHHHHHHHHHHcCCCEEEEEcC--------CCcEEEEEeHHHHHHHHHH
Confidence 47899998866 78999999999999999999999999997 7899999999999987654
No 92
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.01 E-value=3.7e-06 Score=73.28 Aligned_cols=61 Identities=8% Similarity=0.085 Sum_probs=52.1
Q ss_pred ccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccC-CeEEEEEehhhHHHHHH
Q 007694 493 TCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRK-QRIVAILHYDSIWNCLR 568 (593)
Q Consensus 493 ~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~-~~lvGiIt~~di~~~~~ 568 (593)
..+++|+|.+.. .+.++++++++.+|.+.|.+++.+++||+|+ + ++++|+||.+|+++...
T Consensus 5 ~~~v~~iM~~~~-------~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--------~~~~~~Givt~~dl~~~~~ 66 (130)
T 3i8n_A 5 DVPVTQVMTPRP-------VVFRVDATMTINEFLDKHKDTPFSRPLVYSE--------QKDNIIGFVHRLELFKMQQ 66 (130)
T ss_dssp --CCTTTSCCBC-------CCCEEETTSBHHHHHHHTTTCSCSCCEEESS--------STTCEEEECCHHHHHHHHH
T ss_pred cCCHhhCCCcHH-------HEEEEcCCCCHHHHHHHHHhCCCCEEEEEeC--------CCCcEEEEEEHHHHHHHHh
Confidence 458999998642 2368999999999999999999999999996 5 89999999999998765
No 93
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.00 E-value=3.5e-06 Score=73.36 Aligned_cols=61 Identities=13% Similarity=0.099 Sum_probs=52.1
Q ss_pred ccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccC-CeEEEEEehhhHHHHHH
Q 007694 493 TCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRK-QRIVAILHYDSIWNCLR 568 (593)
Q Consensus 493 ~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~-~~lvGiIt~~di~~~~~ 568 (593)
..+++|+|.+.. ++.++++++++.+|.+.|.+++.+++||+|+ + ++++|+||.+|+++...
T Consensus 4 ~~~v~diM~~~~-------~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--------~~~~~~Givt~~dl~~~~~ 65 (129)
T 3jtf_A 4 ERTVADIMVPRS-------RMDLLDISQPLPQLLATIIETAHSRFPVYED--------DRDNIIGILLAKDLLRYML 65 (129)
T ss_dssp CCBHHHHCEEGG-------GCCCEETTSCHHHHHHHHHHSCCSEEEEESS--------STTCEEEEEEGGGGGGGGT
T ss_pred CCCHHHhCccHH-------HeEEECCCCCHHHHHHHHHHcCCCEEEEEcC--------CCCcEEEEEEHHHHHhHhc
Confidence 458999998421 2378999999999999999999999999996 4 89999999999987653
No 94
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=97.98 E-value=9.6e-06 Score=71.22 Aligned_cols=56 Identities=21% Similarity=0.274 Sum_probs=51.1
Q ss_pred ccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHH
Q 007694 493 TCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWN 565 (593)
Q Consensus 493 ~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~ 565 (593)
..+++|+|.+++ .++++++++.+|.+.|.+++.+.+||+|+ +++++|+||.+|+++
T Consensus 6 ~~~v~~im~~~~---------~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--------~~~~~Givt~~dl~~ 61 (138)
T 2yzi_A 6 KAPIKVYMTKKL---------LGVKPSTSVQEASRLMMEFDVGSLVVIND--------DGNVVGFFTKSDIIR 61 (138)
T ss_dssp TSBGGGTCBCCC---------CEECTTSBHHHHHHHHHHHTCSEEEEECT--------TSCEEEEEEHHHHHH
T ss_pred hhhHHHHhcCCC---------eEECCCCcHHHHHHHHHHcCCCEEEEEcC--------CCcEEEEEeHHHHHH
Confidence 458899998766 89999999999999999999999999997 789999999999974
No 95
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=97.95 E-value=1.1e-05 Score=73.52 Aligned_cols=65 Identities=17% Similarity=0.231 Sum_probs=55.5
Q ss_pred cccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHHH
Q 007694 492 NTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLREE 570 (593)
Q Consensus 492 ~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~~ 570 (593)
...+|+|+|.+.. +++.++++++++.+|++.|.+++.+.+||+|+ +++++|+||.+|+++.+.+.
T Consensus 22 ~~~~v~dim~~~~------~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~--------~~~~~Givt~~dl~~~~~~~ 86 (165)
T 3fhm_A 22 MATFVKDLLDRKG------RDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDA--------DGVVLGIFTERDLVKAVAGQ 86 (165)
T ss_dssp SSCBHHHHHHHHC------SCCCEECTTSBHHHHHHHHHHHTCSEEEEECT--------TSCEEEEEEHHHHHHHHHHH
T ss_pred hhcCHHHHhccCC------CCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC--------CCeEEEEEEHHHHHHHHHhc
Confidence 3568999998620 11389999999999999999999999999997 78999999999999887654
No 96
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=97.95 E-value=9e-06 Score=73.16 Aligned_cols=62 Identities=15% Similarity=0.168 Sum_probs=53.0
Q ss_pred ccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHHH
Q 007694 493 TCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLRE 569 (593)
Q Consensus 493 ~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~~ 569 (593)
..+++|+|.+. +++.++++++++.+|.+.|.+++.+++||+|+ +|+++|+||.+|+.+.+.+
T Consensus 14 ~~~v~dim~p~-------~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~--------~~~~~Giit~~dl~~~~~~ 75 (156)
T 3ctu_A 14 LGQEETFLTPA-------KNLAVLIDTHNADHATLLLSQMTYTRVPVVTD--------EKQFVGTIGLRDIMAYQME 75 (156)
T ss_dssp HTTGGGGEEEG-------GGCCCEETTSBHHHHHHHHTTCSSSEEEEECC---------CBEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHcCcc-------cCceEECCCCCHHHHHHHHHHCCCceEeEECC--------CCEEEEEEcHHHHHHHHHh
Confidence 35789999842 12388999999999999999999999999997 7999999999999988764
No 97
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=97.95 E-value=8.9e-06 Score=73.48 Aligned_cols=59 Identities=15% Similarity=0.241 Sum_probs=53.2
Q ss_pred ccchhhhhcc--CccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHH
Q 007694 493 TCLVSSICTR--GISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLR 568 (593)
Q Consensus 493 ~~~V~dim~~--~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~ 568 (593)
..+++|+|.+ ++ .++++++++.+|++.|.+++.+.+||+|+ +++++|+||.+|+.+.+.
T Consensus 13 ~~~v~~im~~~~~~---------~~v~~~~~l~~a~~~m~~~~~~~~pVvd~--------~~~lvGivt~~dl~~~~~ 73 (159)
T 1yav_A 13 EATVGQFMIEADKV---------AHVQVGNNLEHALLVLTKTGYTAIPVLDP--------SYRLHGLIGTNMIMNSIF 73 (159)
T ss_dssp TCBHHHHSEEGGGS---------CCEETTCBHHHHHHHHHHHCCSEEEEECT--------TCBEEEEEEHHHHHHHHB
T ss_pred HhhHHHHhCCccce---------EEECCCCcHHHHHHHHHhCCCcEEEEECC--------CCCEEEEeEHHHHHHHhh
Confidence 4689999987 55 78999999999999999999999999997 789999999999987763
No 98
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=97.94 E-value=7.1e-06 Score=73.26 Aligned_cols=61 Identities=11% Similarity=0.182 Sum_probs=53.1
Q ss_pred ccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHH
Q 007694 493 TCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLR 568 (593)
Q Consensus 493 ~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~ 568 (593)
..+++|+|.+. .++.++++++++.+|++.|.+++.+++||+|+ +++++|+||.+|+++.+.
T Consensus 14 ~~~v~~im~~~-------~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~--------~~~~~Givt~~dl~~~~~ 74 (150)
T 3lqn_A 14 QIFVKDLMISS-------EKVAHVQIGNGLEHALLVLVKSGYSAIPVLDP--------MYKLHGLISTAMILDGIL 74 (150)
T ss_dssp HCBHHHHSEEG-------GGSCCBCTTSBHHHHHHHHHHHTCSEEEEECT--------TCBEEEEEEHHHHHHHTB
T ss_pred cCChhhcccCC-------CceEEECCCCcHHHHHHHHHHcCCcEEEEECC--------CCCEEEEEEHHHHHHHHH
Confidence 46899999852 11378999999999999999999999999997 799999999999988763
No 99
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=97.94 E-value=9.5e-06 Score=71.18 Aligned_cols=59 Identities=25% Similarity=0.396 Sum_probs=52.5
Q ss_pred ccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhH-HHHHH
Q 007694 493 TCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSI-WNCLR 568 (593)
Q Consensus 493 ~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di-~~~~~ 568 (593)
..+++++|.+++ .++++++++.++.+.|.+.+.+++||+|+ +++++|+||++|+ .+.+.
T Consensus 7 ~~~v~~im~~~~---------~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--------~~~~~Givt~~dl~~~~~~ 66 (138)
T 2p9m_A 7 NIKVKDVMTKNV---------ITAKRHEGVVEAFEKMLKYKISSLPVIDD--------ENKVIGIVTTTDIGYNLIR 66 (138)
T ss_dssp TCBGGGTSBCSC---------CCEETTSBHHHHHHHHHHHTCCEEEEECT--------TCBEEEEEEHHHHHHHHTT
T ss_pred cCCHHHhhcCCc---------eEECCCCcHHHHHHHHHHCCCcEEEEECC--------CCeEEEEEEHHHHHHHHHh
Confidence 458899998765 78999999999999999999999999997 7899999999999 77543
No 100
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=97.94 E-value=4.7e-06 Score=73.32 Aligned_cols=60 Identities=10% Similarity=0.082 Sum_probs=51.7
Q ss_pred cchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccC-CeEEEEEehhhHHHHHH
Q 007694 494 CLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRK-QRIVAILHYDSIWNCLR 568 (593)
Q Consensus 494 ~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~-~~lvGiIt~~di~~~~~ 568 (593)
.+++|+|.+.. ++.++++++++.+|+++|.+++.+++||+|+ + ++++|+||.+|+++.+.
T Consensus 3 ~~v~~iM~~~~-------~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~--------~~~~~vGivt~~dl~~~~~ 63 (136)
T 3lfr_A 3 LQVRDIMVPRS-------QMISIKATQTPREFLPAVIDAAHSRYPVIGE--------SHDDVLGVLLAKDLLPLIL 63 (136)
T ss_dssp CBHHHHSEEGG-------GCCCEETTCCHHHHHHHHHHHCCSEEEEESS--------STTCEEEEEEGGGGGGGGG
T ss_pred CChHhccccHH-------HEEEEcCCCCHHHHHHHHHhCCCCEEEEEcC--------CCCcEEEEEEHHHHHHHHH
Confidence 47899998421 2378999999999999999999999999996 5 79999999999987654
No 101
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=97.92 E-value=1.6e-05 Score=68.39 Aligned_cols=60 Identities=32% Similarity=0.381 Sum_probs=54.7
Q ss_pred hhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhh
Q 007694 416 EELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSK 476 (593)
Q Consensus 416 ~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~ 476 (593)
...+++++|.+++.++++++++.++.+.|.+++.+.+||+|+ ++++|+++.+|+.+.+.+
T Consensus 63 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 63 AEVKVWEVMERDLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKMA 122 (125)
T ss_dssp TTSBHHHHCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC-
T ss_pred cccCHHHHcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 467899999999999999999999999999999999999998 999999999999887643
No 102
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=97.91 E-value=8.8e-06 Score=70.61 Aligned_cols=59 Identities=14% Similarity=0.153 Sum_probs=54.7
Q ss_pred hhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhh
Q 007694 418 LKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSK 476 (593)
Q Consensus 418 i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~ 476 (593)
.+++++|.+++.++++++++.++.+.|.+++...+||+|++|+++|+|+++|+.+.+.+
T Consensus 68 ~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 68 EKLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp CBCCGGGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHHT
T ss_pred CcHHHHccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 56899999999999999999999999999999999999999999999999999988653
No 103
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=97.89 E-value=2.5e-05 Score=68.05 Aligned_cols=58 Identities=19% Similarity=0.218 Sum_probs=52.7
Q ss_pred hhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHh
Q 007694 417 ELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLS 475 (593)
Q Consensus 417 ~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~ 475 (593)
..+++++| +++.++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+.
T Consensus 69 ~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (130)
T 3hf7_A 69 KEIMLRAA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIV 126 (130)
T ss_dssp HHHHHHHS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred hhhHHHhc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHh
Confidence 46789999 66789999999999999999999999999999999999999999998754
No 104
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=97.88 E-value=2.3e-05 Score=70.53 Aligned_cols=62 Identities=16% Similarity=0.257 Sum_probs=56.7
Q ss_pred hhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhcc
Q 007694 416 EELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLS 478 (593)
Q Consensus 416 ~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~ 478 (593)
...+++++|++++.++++++++.++++.|.+++.+.+||+| +++++|+|+.+|+.+.+....
T Consensus 76 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~~ 137 (157)
T 4fry_A 76 KATRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQ 137 (157)
T ss_dssp SSCBHHHHSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTC
T ss_pred cccCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999 799999999999999876544
No 105
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=97.87 E-value=2.1e-05 Score=70.06 Aligned_cols=61 Identities=21% Similarity=0.274 Sum_probs=55.9
Q ss_pred hhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhc
Q 007694 417 ELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKL 477 (593)
Q Consensus 417 ~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~ 477 (593)
..++.++|.+++.++++++++.++++.|.+++.+.+||+|++++++|+|+.+|+.+.+.+.
T Consensus 84 ~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~~ 144 (152)
T 4gqw_A 84 GKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQI 144 (152)
T ss_dssp CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC-
T ss_pred cccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHhc
Confidence 4679999999999999999999999999999999999999899999999999999986553
No 106
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=97.87 E-value=2.5e-05 Score=68.31 Aligned_cols=60 Identities=17% Similarity=0.301 Sum_probs=55.3
Q ss_pred hhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhh
Q 007694 416 EELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSK 476 (593)
Q Consensus 416 ~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~ 476 (593)
...+++++|++++.++++++++.++++.|.+++.+.+||+| +++++|+|+.+|+.+.+.+
T Consensus 72 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 72 KDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp GGSBGGGTSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred ccCCHHHhccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHh
Confidence 46789999999999999999999999999999999999999 7999999999999987654
No 107
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.87 E-value=2.1e-05 Score=70.84 Aligned_cols=59 Identities=8% Similarity=0.070 Sum_probs=53.5
Q ss_pred cccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcc-cceeecchhhhhccCCeEEEEEehhhHHHHHH
Q 007694 492 NTCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQ-LPVIKRSRELQRRRKQRIVAILHYDSIWNCLR 568 (593)
Q Consensus 492 ~~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~-lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~ 568 (593)
...+++|+|.+++ .++++++++.+|++.|.+.+.+. +||+|+ + +++|+||.+|+++.+.
T Consensus 14 ~~~~v~~im~~~~---------~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~--------~-~~vGivt~~dl~~~~~ 73 (157)
T 1o50_A 14 KVKDVCKLISLKP---------TVVEEDTPIEEIVDRILEDPVTRTVYVARD--------N-KLVGMIPVMHLLKVSG 73 (157)
T ss_dssp BHHHHTTSSCCCC---------EEECTTCBHHHHHHHHHHSTTCCEEEEEET--------T-EEEEEEEHHHHHHHHH
T ss_pred ccccHhhcccCCC---------ceECCCCCHHHHHHHHHhCCCCccEEEEEC--------C-EEEEEEEHHHHHHHHh
Confidence 3568999998876 89999999999999999999999 999996 6 9999999999998765
No 108
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=97.87 E-value=2e-05 Score=68.64 Aligned_cols=61 Identities=21% Similarity=0.358 Sum_probs=55.9
Q ss_pred hhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhc
Q 007694 417 ELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKL 477 (593)
Q Consensus 417 ~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~ 477 (593)
..+++++|.+++.++++++++.++.+.|.+++.+.+||+|++|+++|+|+.+|+.+.+.+.
T Consensus 66 ~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~ 126 (133)
T 2ef7_A 66 ETKAEEFMTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDM 126 (133)
T ss_dssp TCBGGGTSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH
T ss_pred ccCHHHHcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHH
Confidence 4679999999999999999999999999999999999999889999999999999886543
No 109
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=97.87 E-value=2.2e-05 Score=74.43 Aligned_cols=63 Identities=16% Similarity=0.145 Sum_probs=57.6
Q ss_pred hhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhcc
Q 007694 416 EELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLS 478 (593)
Q Consensus 416 ~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~~ 478 (593)
...+++++|++++.++++++++.++.+.|.+++...+||+|++|+++|+||.+|+...+..+.
T Consensus 114 ~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e~ 176 (205)
T 3kxr_A 114 PHEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREHY 176 (205)
T ss_dssp TTSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHHH
T ss_pred CcchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHHH
Confidence 356799999999999999999999999999999999999999999999999999999876543
No 110
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=97.84 E-value=2e-05 Score=72.44 Aligned_cols=61 Identities=23% Similarity=0.240 Sum_probs=56.4
Q ss_pred hhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhh
Q 007694 416 EELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSK 476 (593)
Q Consensus 416 ~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~ 476 (593)
...+++++|++++.++++++++.++.+.|.+++.+.+||+|++|+++|+|+++|+.+.+.+
T Consensus 96 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~ 156 (180)
T 3sl7_A 96 YGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQ 156 (180)
T ss_dssp TTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred ccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHH
Confidence 4567999999999999999999999999999999999999999999999999999988654
No 111
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=97.84 E-value=2e-05 Score=72.57 Aligned_cols=62 Identities=19% Similarity=0.140 Sum_probs=53.2
Q ss_pred ccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccC-CeEEEEEehhhHHHHHHH
Q 007694 493 TCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRK-QRIVAILHYDSIWNCLRE 569 (593)
Q Consensus 493 ~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~-~~lvGiIt~~di~~~~~~ 569 (593)
..+|+++|++.. .++++++++++.+|+++|.+++.+.+||+|+ + ++++|+||.+|+++...+
T Consensus 35 ~~~v~diM~~~~-------~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~--------~~~~lvGivt~~Dl~~~~~~ 97 (173)
T 3ocm_A 35 ERSIRSIMTPRT-------DVSWVNIDDDAATIRQQLTAAPHSFFPVCRG--------SLDEVVGIGRAKDLVADLIT 97 (173)
T ss_dssp TSCSTTTSEEGG-------GCCCEETTSCHHHHHHHHHHSSCSEEEEESS--------STTSEEEEEEHHHHHHHHHH
T ss_pred CCCHHHhCCcHH-------HeEEEeCCCCHHHHHHHHHhCCCCEEEEEeC--------CCCCEEEEEEHHHHHHHHhc
Confidence 458999997521 2378999999999999999999999999986 4 799999999999988754
No 112
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=97.84 E-value=1.6e-05 Score=71.47 Aligned_cols=59 Identities=12% Similarity=0.232 Sum_probs=52.4
Q ss_pred ccchhhhhcc--CccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHH
Q 007694 493 TCLVSSICTR--GISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLR 568 (593)
Q Consensus 493 ~~~V~dim~~--~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~ 568 (593)
..+++|+|.+ ++ .++++++++.+|++.|.+++.+.+||+|+ +++++|+||.+|+.+.+.
T Consensus 10 ~~~v~~im~~~~~~---------~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--------~~~~~Givt~~dl~~~~~ 70 (157)
T 2emq_A 10 QMTVKPFLIPADKV---------AHVQPGNYLDHALLVLTKTGYSAIPVLDT--------SYKLHGLISMTMMMDAIL 70 (157)
T ss_dssp CCBSTTTCEEGGGS---------CCBCTTSBHHHHHHHHHHSSSSEEEEECT--------TCCEEEEEEHHHHHHHSB
T ss_pred hCcHHhhccCCccc---------eEECCCCcHHHHHHHHHHCCceEEEEEcC--------CCCEEEEeeHHHHHHHHh
Confidence 4588999986 44 78999999999999999999999999997 789999999999987654
No 113
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=97.83 E-value=1.3e-05 Score=69.93 Aligned_cols=55 Identities=20% Similarity=0.260 Sum_probs=50.3
Q ss_pred cchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHH
Q 007694 494 CLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWN 565 (593)
Q Consensus 494 ~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~ 565 (593)
.+++|+|.+++ .++++++++.++.+.|.+++.+.+||+|+ +++++|+||.+|+++
T Consensus 8 ~~v~~im~~~~---------~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--------~~~~~Givt~~dl~~ 62 (133)
T 1y5h_A 8 TTARDIMNAGV---------TCVGEHETLTAAAQYMREHDIGALPICGD--------DDRLHGMLTDRDIVI 62 (133)
T ss_dssp CCHHHHSEETC---------CCEETTSBHHHHHHHHHHHTCSEEEEECG--------GGBEEEEEEHHHHHH
T ss_pred cCHHHHhcCCc---------eEeCCCCCHHHHHHHHHHhCCCeEEEECC--------CCeEEEEEeHHHHHH
Confidence 48899998766 78999999999999999999999999987 689999999999984
No 114
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=97.83 E-value=2e-05 Score=71.25 Aligned_cols=61 Identities=18% Similarity=0.301 Sum_probs=53.5
Q ss_pred ccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHH
Q 007694 493 TCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLR 568 (593)
Q Consensus 493 ~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~ 568 (593)
..+++|+|.+++ .++++++++.+|++.|.+++.+++||+|+++ +++++|+||.+|+.+.+.
T Consensus 12 ~~~v~dim~~~~---------~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~------~~~~~Givt~~dl~~~~~ 72 (164)
T 2pfi_A 12 HVRVEHFMNHSI---------TTLAKDTPLEEVVKVVTSTDVTEYPLVESTE------SQILVGIVQRAQLVQALQ 72 (164)
T ss_dssp SCBHHHHCBCCC---------CCEETTCBHHHHHHHHHTCCCSEEEEESCTT------TCBEEEEEEHHHHHHHHH
T ss_pred CCCHHHHcCCCC---------eEECCCCcHHHHHHHHHhCCCCceeEEecCC------CCEEEEEEEHHHHHHHHH
Confidence 458999998866 7899999999999999999999999998411 589999999999998764
No 115
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=97.82 E-value=1.2e-05 Score=72.55 Aligned_cols=61 Identities=11% Similarity=0.156 Sum_probs=52.1
Q ss_pred ccchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccC-CeEEEEEehhhHHHHHH
Q 007694 493 TCLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRK-QRIVAILHYDSIWNCLR 568 (593)
Q Consensus 493 ~~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~-~~lvGiIt~~di~~~~~ 568 (593)
..+++|+|.+.. ++.++++++++.+|++.|.+++.+++||+|+ + ++++|+||.+|+++.+.
T Consensus 37 ~~~v~diM~~~~-------~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~--------~~~~lvGivt~~dl~~~~~ 98 (156)
T 3oi8_A 37 DLEVRDAMITRS-------RMNVLKENDSIERITAYVIDTAHSRFPVIGE--------DKDEVLGILHAKDLLKYMF 98 (156)
T ss_dssp TCBGGGTCEEGG-------GCCCEETTCCHHHHHHHHHHHCCSEEEEESS--------STTCEEEEEEGGGGGGGSS
T ss_pred CCCHhheeeeHH-------HeEEECCCCCHHHHHHHHHHCCCCEEEEEcC--------CCCcEEEEEEHHHHHHHHH
Confidence 468999998621 2378999999999999999999999999996 5 59999999999987643
No 116
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=97.81 E-value=2.9e-05 Score=68.40 Aligned_cols=59 Identities=8% Similarity=0.260 Sum_probs=51.0
Q ss_pred ccchhh---hhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHH
Q 007694 493 TCLVSS---ICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLR 568 (593)
Q Consensus 493 ~~~V~d---im~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~ 568 (593)
..++++ +|.+++ .++++++++.+|++.|.+++.+.+||+|+ +++++|+||.+|+.+.+.
T Consensus 7 ~~~v~~~~~~~~~~~---------~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--------~~~~~Givt~~dl~~~~~ 68 (144)
T 2nyc_A 7 KIPIGDLNIITQDNM---------KSCQMTTPVIDVIQMLTQGRVSSVPIIDE--------NGYLINVYEAYDVLGLIK 68 (144)
T ss_dssp GSBGGGSSCCBCSSC---------CCBCTTSBHHHHHHHHHHHTCSEEEEECT--------TCBEEEEEEHHHHHHHHH
T ss_pred hcchhhcCCCCCCCc---------eEECCCCcHHHHHHHHHHcCcceeeEEcC--------CCcEEEEEcHHHHHHHhc
Confidence 346677 665554 78999999999999999999999999997 789999999999988764
No 117
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=97.80 E-value=3.2e-05 Score=69.37 Aligned_cols=59 Identities=24% Similarity=0.313 Sum_probs=54.9
Q ss_pred hhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhh
Q 007694 417 ELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSK 476 (593)
Q Consensus 417 ~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~ 476 (593)
..+++++| +++.++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+..
T Consensus 85 ~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~ 143 (153)
T 3oco_A 85 KAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFG 143 (153)
T ss_dssp TSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC
T ss_pred CCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhc
Confidence 57899999 889999999999999999999999999999999999999999999988654
No 118
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=97.80 E-value=2.3e-05 Score=72.65 Aligned_cols=58 Identities=21% Similarity=0.111 Sum_probs=52.6
Q ss_pred cchhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHHHH
Q 007694 494 CLVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNCLR 568 (593)
Q Consensus 494 ~~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~~~ 568 (593)
.+++++|.+++ .++++++++.+|+++|.+++.+++||+|+ +|+++|+||.+|+++.+.
T Consensus 9 ~~v~~im~~~~---------~~v~~~~~l~ea~~~~~~~~~~~~pVvd~--------~g~~vGivt~~dl~~~~~ 66 (184)
T 1pvm_A 9 MRVEKIMNSNF---------KTVNWNTTVFDAVKIMNENHLYGLVVKDD--------NGNDVGLLSERSIIKRFI 66 (184)
T ss_dssp CBGGGTSBTTC---------CEEETTCBHHHHHHHHHHHTCCEEEEECT--------TSCEEEEEEHHHHHHHTG
T ss_pred cCHHHhcCCCC---------eEECCCCcHHHHHHHHHHcCCCEEEEEcC--------CCcEEEEEeHHHHHHHHh
Confidence 57899998766 89999999999999999999999999997 789999999999987654
No 119
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=97.76 E-value=2.7e-05 Score=72.02 Aligned_cols=65 Identities=14% Similarity=0.233 Sum_probs=54.1
Q ss_pred ccchhhhhccCccccCCCCcceEe--cCCCCHHHHHHHHHHcCCccccee--ecchhhhhccCCeEEEEEehhhHHHHHH
Q 007694 493 TCLVSSICTRGISYRGRERGLLTC--YPDTDLAIAKELMEAKGIKQLPVI--KRSRELQRRRKQRIVAILHYDSIWNCLR 568 (593)
Q Consensus 493 ~~~V~dim~~~~~~~~~~~~~~~v--~~~~~l~~a~~~~~~~~~~~lpVv--d~~~~~~~~~~~~lvGiIt~~di~~~~~ 568 (593)
..+++|+|.++. +..+.++ ++++++.+|++.|.+++.+.+||+ |+ +++++|+||.+|+++.+.
T Consensus 10 ~~~v~dim~~~~-----~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~--------~~~lvGiit~~dl~~~~~ 76 (185)
T 2j9l_A 10 KTLAMDVMKPRR-----NDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRE--------SQRLVGFVLRRDLIISIE 76 (185)
T ss_dssp CCBHHHHSBSCT-----TSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTT--------TCBEEEEEEHHHHHHHHH
T ss_pred cCcHHHHhcccc-----cCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECC--------CCeEEEEEEHHHHHHHHH
Confidence 468999998751 0113677 999999999999999999999999 55 789999999999998876
Q ss_pred HH
Q 007694 569 EE 570 (593)
Q Consensus 569 ~~ 570 (593)
..
T Consensus 77 ~~ 78 (185)
T 2j9l_A 77 NA 78 (185)
T ss_dssp HH
T ss_pred hh
Confidence 53
No 120
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=97.74 E-value=3.8e-05 Score=69.34 Aligned_cols=61 Identities=13% Similarity=0.184 Sum_probs=56.1
Q ss_pred hhhhhhhhhcc--CceEecCCCCHHHHHHHHHhcCCcEEEEEeCCC---eEEEEEeHHHHHHHHhh
Q 007694 416 EELKVSRAMSK--DFVKVALTVTLKEAIESMKDGQQNCVLVVNGED---FLEGILTYGDIKRCLSK 476 (593)
Q Consensus 416 ~~i~v~~~M~~--~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~---~lvGiVt~~dL~~~l~~ 476 (593)
...+++++|++ ++.++++++++.++++.|.+++.+.+||+|+++ +++|+|+.+|+.+.+.+
T Consensus 79 ~~~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 79 TSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp TTCBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHH
T ss_pred cCcCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHH
Confidence 45689999998 889999999999999999999999999999888 99999999999988654
No 121
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=97.73 E-value=4.6e-05 Score=68.19 Aligned_cols=59 Identities=25% Similarity=0.481 Sum_probs=53.1
Q ss_pred hhhhhhhhc------cCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHh
Q 007694 417 ELKVSRAMS------KDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLS 475 (593)
Q Consensus 417 ~i~v~~~M~------~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~ 475 (593)
..++.++|. +++.++++++++.++.+.|.+.+.+.+||+|++|+++|+|+.+|+.+.+.
T Consensus 86 ~~~v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l~ 150 (152)
T 2uv4_A 86 DVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALV 150 (152)
T ss_dssp TSBGGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHC
T ss_pred cchHHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 356888886 78899999999999999999999999999998899999999999988753
No 122
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.56 E-value=6.4e-05 Score=81.84 Aligned_cols=61 Identities=11% Similarity=0.208 Sum_probs=55.1
Q ss_pred ccchhhhhccCccccCCCCcceEecCC-CCHHHHHHHHHHcCCcccceee-cchhhhhccCCeEEEEEehhhHHHHHHHH
Q 007694 493 TCLVSSICTRGISYRGRERGLLTCYPD-TDLAIAKELMEAKGIKQLPVIK-RSRELQRRRKQRIVAILHYDSIWNCLREE 570 (593)
Q Consensus 493 ~~~V~dim~~~~~~~~~~~~~~~v~~~-~~l~~a~~~~~~~~~~~lpVvd-~~~~~~~~~~~~lvGiIt~~di~~~~~~~ 570 (593)
..+|+|+|.+++ +++.++ +++.+++++|.+++++++||+| + +++++|+||.+|+++.+.+.
T Consensus 383 ~~~V~diM~~~~---------vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~--------~g~lvGiVt~~Dll~~l~~~ 445 (527)
T 3pc3_A 383 SLAIAELELPAP---------PVILKSDATVGEAIALMKKHRVDQLPVVDQD--------DGSVLGVVGQETLITQIVSM 445 (527)
T ss_dssp TSBGGGGCCCCC---------SCCEETTCBHHHHHHHHHHHTCSEEEEECTT--------TCCEEEEEEHHHHHHHHHHH
T ss_pred CCcHHHhCcCCC---------eEEcCCCCcHHHHHHHHHHcCCCeEEEEECC--------CCEEEEEEEHHHHHHHHHhc
Confidence 568999999876 889999 9999999999999999999999 5 68999999999999887653
No 123
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.46 E-value=0.00014 Score=72.54 Aligned_cols=62 Identities=18% Similarity=0.283 Sum_probs=56.8
Q ss_pred hhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhhc
Q 007694 416 EELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKL 477 (593)
Q Consensus 416 ~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~~ 477 (593)
...+++++|++++.++++++++.++.+.|.+++...+||+|++|+++|+||.+|+...+...
T Consensus 199 ~~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~e 260 (286)
T 2oux_A 199 DDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDDE 260 (286)
T ss_dssp TTSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred CCCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 35679999999999999999999999999999999999999999999999999999886543
No 124
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.45 E-value=0.00011 Score=72.88 Aligned_cols=61 Identities=26% Similarity=0.280 Sum_probs=55.3
Q ss_pred hhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhh
Q 007694 416 EELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSK 476 (593)
Q Consensus 416 ~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~ 476 (593)
...+++++|++++.++++++++.++.+.|.+++...+||+|++|+++|+||.+|+...+..
T Consensus 197 ~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 197 PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp TTCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC--
T ss_pred CCCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHH
Confidence 3568999999999999999999999999999999999999999999999999999987644
No 125
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.43 E-value=3.1e-05 Score=83.62 Aligned_cols=61 Identities=23% Similarity=0.231 Sum_probs=0.0
Q ss_pred hhhhhhhhhccC--ceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhh
Q 007694 416 EELKVSRAMSKD--FVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSK 476 (593)
Q Consensus 416 ~~i~v~~~M~~~--~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~ 476 (593)
.+.+++++|+++ +.++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+.+..
T Consensus 159 ~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~ 221 (503)
T 1me8_A 159 TETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVC 221 (503)
T ss_dssp ---------------------------------------------------------------
T ss_pred ccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhc
Confidence 456799999987 9999999999999999999999999999999999999999999887543
No 126
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.41 E-value=0.00054 Score=73.94 Aligned_cols=61 Identities=23% Similarity=0.394 Sum_probs=56.3
Q ss_pred hhhhhhhhhcc-CceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhh
Q 007694 416 EELKVSRAMSK-DFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSK 476 (593)
Q Consensus 416 ~~i~v~~~M~~-~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~ 476 (593)
.+.+++++|++ +++++++++++.++.+.|.+++.+.+||+|++++++|+|+.+|+.+.+..
T Consensus 173 ~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 173 YSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp SSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred CCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhc
Confidence 35679999998 89999999999999999999999999999999999999999999988654
No 127
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.34 E-value=0.00023 Score=76.23 Aligned_cols=61 Identities=26% Similarity=0.280 Sum_probs=56.6
Q ss_pred hhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhh
Q 007694 416 EELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSK 476 (593)
Q Consensus 416 ~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~ 476 (593)
.+.+++++|++++.++++++++.++.+.|.+++...+||+|++|+++|+||.+|+.+.+.+
T Consensus 217 ~~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 217 PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp TTSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CCCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHH
Confidence 4578999999999999999999999999999999999999999999999999999987644
No 128
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.71 E-value=0.0073 Score=64.91 Aligned_cols=60 Identities=20% Similarity=0.327 Sum_probs=55.8
Q ss_pred hhhhhhhhcc-CceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhh
Q 007694 417 ELKVSRAMSK-DFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSK 476 (593)
Q Consensus 417 ~i~v~~~M~~-~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~ 476 (593)
+.+++++|++ ++.++++++++.++++.|.+++.+.+||+|++++++|++|++|+.+.+..
T Consensus 151 ~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 151 NAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp SSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred CCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhc
Confidence 5678999998 88999999999999999999999999999999999999999999998764
No 129
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=96.62 E-value=0.0011 Score=71.10 Aligned_cols=53 Identities=19% Similarity=0.315 Sum_probs=45.8
Q ss_pred chhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHH
Q 007694 495 LVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIW 564 (593)
Q Consensus 495 ~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~ 564 (593)
+++++|.+++ +++++++++.++.++|.+++++.+||+|+ +++++|+||.+|+.
T Consensus 90 ~~~~~m~~d~---------v~v~~~~tv~ea~~~m~~~~~s~~PVvd~--------~~~lvGiVt~rDL~ 142 (496)
T 4fxs_A 90 IFEAGVVTHP---------VTVRPEQTIADVMELTHYHGFAGFPVVTE--------NNELVGIITGRDVR 142 (496)
T ss_dssp HCCC--CBCC---------CCBCSSSBHHHHHHHHTSSCCCEEEEECS--------SSBEEEEEEHHHHT
T ss_pred ccccccccCc---------eEECCCCCHHHHHHHHHHcCCcEEEEEcc--------CCEEEEEEEHHHHh
Confidence 4456677655 89999999999999999999999999997 78999999999986
No 130
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.53 E-value=0.00083 Score=72.19 Aligned_cols=59 Identities=24% Similarity=0.344 Sum_probs=0.0
Q ss_pred hhhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHH
Q 007694 416 EELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCL 474 (593)
Q Consensus 416 ~~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l 474 (593)
...+++++|++++.++++++++.++++.|.+++.+.+||+|++++++|++|.+|+.+..
T Consensus 148 ~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~ 206 (486)
T 2cu0_A 148 EGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARK 206 (486)
T ss_dssp -----------------------------------------------------------
T ss_pred CCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhh
Confidence 35678999999899999999999999999999999999999999999999999998874
No 131
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=96.50 E-value=0.00042 Score=73.32 Aligned_cols=57 Identities=16% Similarity=0.307 Sum_probs=0.0
Q ss_pred hhhhhhhhccCceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHH
Q 007694 417 ELKVSRAMSKDFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRC 473 (593)
Q Consensus 417 ~i~v~~~M~~~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~ 473 (593)
+.+++++|+++++++++..+++++.++|.+++.+.+||||++++++|+||++|+.+.
T Consensus 199 ~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~ 255 (556)
T 4af0_A 199 ETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKN 255 (556)
T ss_dssp ---------------------------------------------------------
T ss_pred ceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhh
Confidence 467999999999999999999999999999999999999999999999999999775
No 132
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=96.37 E-value=0.0021 Score=68.91 Aligned_cols=60 Identities=23% Similarity=0.372 Sum_probs=0.0
Q ss_pred hhhhhhhhhc-c-CceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHh
Q 007694 416 EELKVSRAMS-K-DFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLS 475 (593)
Q Consensus 416 ~~i~v~~~M~-~-~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~ 475 (593)
.+.+++++|+ + ++.++++++++.++.+.|.+++.+.+||+|++++++|+||++|+++...
T Consensus 145 ~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 145 AGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp --------------------------------------------------------------
T ss_pred cCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 4568999999 4 6899999999999999999999999999999999999999999988753
No 133
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=96.32 E-value=0.0024 Score=68.80 Aligned_cols=60 Identities=18% Similarity=0.311 Sum_probs=5.2
Q ss_pred hhhhhhhhcc--CceEecCCCCHHHHHHHHHhcCCcEEEEEeCCCeEEEEEeHHHHHHHHhh
Q 007694 417 ELKVSRAMSK--DFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSK 476 (593)
Q Consensus 417 ~i~v~~~M~~--~~~~v~~~~~v~~~~~~l~~~~~~~~pVvd~~~~lvGiVt~~dL~~~l~~ 476 (593)
+.+++++|++ ++.++++++++.++.+.|.+++.+.+||+|++++++|+|+++|+.+.+..
T Consensus 154 ~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~ 215 (494)
T 1vrd_A 154 SKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEH 215 (494)
T ss_dssp -------------------------------------------------------CHHHHTC
T ss_pred CCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhcc
Confidence 4689999998 89999999999999999999999999999999999999999999988654
No 134
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=95.24 E-value=0.0029 Score=68.49 Aligned_cols=58 Identities=12% Similarity=0.094 Sum_probs=26.4
Q ss_pred chhhhhccCccccCCCCcceEecCCCCHHHHHHHHHHcCCcccceeecchhhhhccCCeEEEEEehhhHHHH
Q 007694 495 LVSSICTRGISYRGRERGLLTCYPDTDLAIAKELMEAKGIKQLPVIKRSRELQRRRKQRIVAILHYDSIWNC 566 (593)
Q Consensus 495 ~V~dim~~~~~~~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~lpVvd~~~~~~~~~~~~lvGiIt~~di~~~ 566 (593)
+++++|.+++ .++++++++.++.++|.+++.+.+||+|+++. +++++|+||.+|+.+.
T Consensus 109 ~~~~im~~~~---------~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~-----~~~lvGiVt~~Dl~~~ 166 (514)
T 1jcn_A 109 NFEQGFITDP---------VVLSPSHTVGDVLEAKMRHGFSGIPITETGTM-----GSKLVGIVTSRDIDFL 166 (514)
T ss_dssp TCCTTSCSSC---------CCCCC-----------------CEESCC-------------CCEECTTTTC--
T ss_pred hhhhccccCC---------EEECCCCCHHHHHHHHHhcCCCEEEEEeCCCc-----CCEEEEEEEHHHHHhh
Confidence 4567777655 78999999999999999999999999996200 2799999999998764
No 135
>2kjf_A Carnocyclin-A; circular bacteriocin, antimicrobial peptide, solution helical, saposin-fold, antibiotic, antimicrobial, bacteriocin; NMR {Carnobacterium maltaromaticum}
Probab=27.53 E-value=71 Score=21.54 Aligned_cols=29 Identities=14% Similarity=0.298 Sum_probs=25.6
Q ss_pred HHHHHHHHhcCCccCcchHHHHHHHHHHH
Q 007694 35 AIQAAVTLGTGCSLGPEGPSVDIGKSCAN 63 (593)
Q Consensus 35 ~~~~~~~l~sG~s~G~Egp~v~iga~~~~ 63 (593)
.+++++++.+|..+|..|-+...-++++-
T Consensus 23 tvgsiisilggvtvglsgvftavkaaiak 51 (60)
T 2kjf_A 23 TVGSIISILGGVTVGLSGVFTAVKAAIAK 51 (60)
T ss_dssp CHHHHHHHHCSSCTTTHHHHHHHHHHHHH
T ss_pred hhhHHHHhhcCceechhhHHHHHHHHHHH
Confidence 57899999999999999999988887764
No 136
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=25.57 E-value=59 Score=21.86 Aligned_cols=22 Identities=18% Similarity=0.303 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 007694 160 YLILGMLCGVVSVVFTRLVAWF 181 (593)
Q Consensus 160 ~~llGv~~Gl~g~~f~~~~~~~ 181 (593)
.+..||++|+++.+..-+..++
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~ 32 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAV 32 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEeehHHHHHHHHHHHHHHH
Confidence 4788888888887666554443
No 137
>2ksf_A Sensor protein KDPD; methods development, histidine kinase receptor, membrane domain, four-helical bundle, cell-free synthesis, ATP- binding; NMR {Escherichia coli}
Probab=21.28 E-value=76 Score=25.69 Aligned_cols=46 Identities=17% Similarity=0.256 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHhhhcCCccceeccccCCCccchHHHHHHHHHHHHH
Q 007694 123 IILASVISSTVSTVLLGTQSAFTVPSYDLKSAAELPLYLILGMLCGV 169 (593)
Q Consensus 123 ~~~a~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~llGv~~Gl 169 (593)
.+++++.+.+.++.++- .|.+++.-.+..++..+..+++.|++.+-
T Consensus 53 a~~aa~ls~l~~nffF~-~P~~sf~i~~~~~~vt~~v~l~val~~s~ 98 (107)
T 2ksf_A 53 SVVATVINVVSFDLFFI-APRGTLAVSDVQYLLTFAVMLTVGLVIGN 98 (107)
T ss_dssp CSHHHHHHHHHHHHTTS-CSSCTTCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhc-CCCccccccCHhHHHHHHHHHHHHHHHHH
Confidence 35778888888777663 35555543333223334444555544443
Done!