Query         007699
Match_columns 592
No_of_seqs    312 out of 2172
Neff          6.4 
Searched_HMMs 29240
Date          Mon Mar 25 08:17:28 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007699.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007699hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4grh_A Aminodeoxychorismate sy 100.0  4E-111  1E-115  910.5  39.8  450   82-585     2-455 (457)
  2 1k0e_A P-aminobenzoate synthas 100.0  7E-107  2E-111  879.9  48.4  444   89-584     7-452 (453)
  3 1i1q_A Anthranilate synthase c 100.0  1E-105  4E-110  882.9  53.2  463   86-588     8-515 (520)
  4 1qdl_A Protein (anthranilate s 100.0  2E-106  8E-111  869.0  42.6  417   91-584     3-420 (422)
  5 3h9m_A P-aminobenzoate synthet 100.0  2E-100  7E-105  821.9  43.4  398  116-588    29-430 (436)
  6 2fn0_A Salicylate synthetase,  100.0   2E-97  7E-102  803.4  42.2  422   93-583    12-435 (437)
  7 3log_A Isochorismate synthase/ 100.0 1.3E-96  5E-101  795.1  39.7  396  131-583    52-448 (451)
  8 3hwo_A Isochorismate synthase  100.0 2.8E-80 9.6E-85  659.4  27.3  267  299-585   124-393 (394)
  9 3os6_A Isochorismate synthase  100.0 5.1E-80 1.7E-84  659.0  28.1  270  299-588   116-394 (399)
 10 3bzm_A Menaquinone-specific is 100.0 8.1E-78 2.8E-82  650.3  36.3  320  232-584   107-429 (431)
 11 3gse_A Menaquinone-specific is 100.0 1.4E-78 4.8E-83  657.9  29.8  351  194-584    97-450 (458)
 12 3r75_A Anthranilate/para-amino 100.0 5.7E-70 1.9E-74  615.7  26.5  267  298-586   123-399 (645)
 13 3h9m_A P-aminobenzoate synthet  94.3       2   7E-05   46.1  18.7   73   72-155   160-242 (436)
 14 3hwo_A Isochorismate synthase   90.9      16 0.00056   38.6  19.8   75   71-155   126-212 (394)
 15 3os6_A Isochorismate synthase   90.1      17 0.00056   38.6  19.1   79   72-155   119-209 (399)
 16 1qdl_A Protein (anthranilate s  85.5      22 0.00076   37.9  16.6   73   72-155   156-238 (422)
 17 1k0e_A P-aminobenzoate synthas  84.8      28 0.00096   37.4  17.2   73   72-155   188-270 (453)
 18 4grh_A Aminodeoxychorismate sy  84.4      48  0.0017   35.7  18.9   73   72-155   189-273 (457)
 19 3bzm_A Menaquinone-specific is  74.0      96  0.0033   33.0  19.4   74   72-155   167-252 (431)
 20 3log_A Isochorismate synthase/  48.3 2.8E+02  0.0096   29.6  18.0   69   76-155   195-267 (451)
 21 1i1q_A Anthranilate synthase c  26.6 1.6E+02  0.0056   32.0   8.6   52  333-386    14-72  (520)
 22 2fn0_A Salicylate synthetase,   21.9 1.3E+02  0.0044   32.1   6.5   45  337-381    16-60  (437)

No 1  
>4grh_A Aminodeoxychorismate synthase; helix-sheet-helix sandwich, 4-amino-4-deoxychori PABA, transferase; HET: 15P CPS; 2.25A {Stenotrophomonas maltophilia}
Probab=100.00  E-value=4e-111  Score=910.51  Aligned_cols=450  Identities=29%  Similarity=0.433  Sum_probs=373.3

Q ss_pred             hcCCeEeEEEEEcCCCCCHHHHHHHhhccCCCCCCeEEEecCCCCCcccCCCceeEEEeCCceEEEEeCCeEEEEeCCCC
Q 007699           82 KRANLVPLYRCIFSDHLTPVVAYRCLVQEDDREAPSFLFESVEPGVRVSNVGRYSVVGAQPVMEVIVKDNNVTIMDHEKG  161 (592)
Q Consensus        82 ~~~n~~p~~~~i~~d~lTPv~~y~~L~~~~~~~~~sfLLESa~~g~~~~~~gRYS~IG~~P~~~i~~~~~~v~v~~~~~~  161 (592)
                      ..||+||+++++++|.  |+.+|.+|.+.   + .+|||||+.++   +.+|||||||++|..++.++++...+. .. .
T Consensus         2 ~~~~~~pv~~~l~~d~--~~~~~~~l~~~---~-~~~lLeS~~~~---~~~gRyS~ig~~P~~~~~~~~~~~~~~-~~-~   70 (457)
T 4grh_A            2 SHGTHAPLIHPLPHPI--DLLALQQHDPA---R-FPLLMESTASG---TAQGRWSLLLVAQGDGLRLDADGQVRD-QH-D   70 (457)
T ss_dssp             CCCCCCCEEEECSSCC--CHHHHHHHCGG---G-CCEEEEEECC------CCEEEEEEECCSCEEEECTTSCEEE-TT-C
T ss_pred             CCCCEEEEEEEccCCC--CHHHHHHHhCC---C-CeEEEecCCCC---CCCCCceEEEECCeeEEEEECCcEEEe-cc-c
Confidence            3579999999999987  58899999754   2 48999999986   889999999999999999887654432 11 1


Q ss_pred             ceeeeccCCcchHHHHhHhhcCCcc-cCCCCccccCceeeeeccccchhhhcccCCCCCCCCCCCCcccEEEEeeCeEEE
Q 007699          162 SLVEEVVDDPMEIPRKISEDWKPQI-IDELPEAFCGGWVGYFSYDTVRYVEKKKLPFSKAPHDDRSLADIHLGLYNDVLV  240 (592)
Q Consensus       162 ~~~~~~~~dpl~~lr~~~~~~~~~~-~~~lP~~F~GG~vGyfsYD~~~~~E~~~lP~~~~~~~~~~~Pd~~f~l~d~vIv  240 (592)
                         ....+||++.|+.++..++... ..+.++ |+||++||||||+++++|  ++|.  .+.++.++||+.|++|+++|+
T Consensus        71 ---~~~~~~~~~~l~~~~~~~~~~~~~~~~~p-f~gG~~Gy~~Yd~~~~~e--~~~~--~~~~~~~~Pd~~~~~~~~~iv  142 (457)
T 4grh_A           71 ---LVQPGTFLQALDRAWQHERLSHDGSHSLP-FRGGWALMLDYEVASQIE--PVLP--ARARGDGRPTALALRCPAAVL  142 (457)
T ss_dssp             ---CEECSCHHHHHHHHHHHTCCCCCSCCSSS-CCSEEEEEECGGGHHHHS--TTSC--CCCCTTCCCSEEEEEECEEEE
T ss_pred             ---eeCCCCHHHHHHHHHHhhcccccccCCCC-cccceEEeecccchhhhc--cCCC--CCCCCCCCCcEEEEecCEEEE
Confidence               1224799999999988665432 122332 999999999999999999  4553  345678899999999999999


Q ss_pred             EeCCCCEEEEEEeeccCccccHHHHHHHHHHHHHH-HHHccccCcccccCCCcCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 007699          241 FDHVEKKVYVIHWVRLDQHSSVQKAYAEGLEHLEK-LVARKVITRSIDLHTHHFGPPLKKSNMTSEAYKNAVLEAKEHIQ  319 (592)
Q Consensus       241 fDh~~~~l~li~~~~~~~~~~~~~~~~~~~~rl~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~y~~~V~~~~~~I~  319 (592)
                      |||.+++++++++..      .+    ..++++.. .+.. ..+ ....    .......+++++++|+++|++++++|+
T Consensus       143 ~Dh~~~~~~l~~~~~------~~----~~~~~~~~~~~~~-~~~-~~~~----~~~~~~~~~~~~~~y~~~V~~~~~~I~  206 (457)
T 4grh_A          143 HDHHNEASFVIAEAG------EQ----ALLDALVALASAA-LPE-AGQG----WQPPQAVGEDAPQRFTDGVRRVIEYLR  206 (457)
T ss_dssp             EESTTCCEEEEECTT------CH----HHHHHHHHTSSSC-CCC-SSCC----CCCCSEEEECCHHHHHHHHHHHHHHHH
T ss_pred             EECCCCeEEEEEccc------HH----HHHHHHHhhhhhc-ccc-cccc----ccccccccCCCHHHHHHHHHHHHHHHH
Confidence            999999999997631      11    12223332 1111 000 0000    011234567899999999999999999


Q ss_pred             cCCCceeeeeeEEeecCCC--CHHHHHHHHHHhCCCCeEEEEecCCeEEEeecCceeEEEECCEEEEEecCCCCCCCCCh
Q 007699          320 AGDIFQIVLSQRFERRTFA--DPFEVYRALRVVNPSPYMTYLQARGCILVASSPEILTRVKKNKIVNRPLAGTVRRGRTT  397 (592)
Q Consensus       320 ~Gdi~qvVLsrr~~~~~~~--~p~~ly~~Lr~~nPs~y~~~~~~~~~~~vgaSPE~l~~~~~~~v~t~plAGT~~rg~~~  397 (592)
                      +||+|||||||++......  ||+++|++||+.||+||+||+++++..|+|||||+|+++++++++|+|||||+|||.+ 
T Consensus       207 ~Gd~~qvvLsr~~~~~~~~~~dp~~ly~~Lr~~nPspy~~~~~~~~~~~vgaSPE~lv~~~~~~v~t~PiaGT~~Rg~~-  285 (457)
T 4grh_A          207 AGDVFQVNLSRRWNAQFAAPVSPQALYAQLRRANPAPFAGLFSAHGRHVVSSSPERLVSVHAGHAQTRPIAGTRPRFEG-  285 (457)
T ss_dssp             HTSCSEEEEEEEEEEECSSCCCHHHHHHHHHHHCCCSSEEEEEETTEEEEESSCEEEEEEETTEEECSCSSSSCCEEEC-
T ss_pred             cCCceEEEeeeEEEEecCCCCCHHHHHHHHHHhCCCCeEEEEECCCCEEEEEChhhhEEEECCEEEEEecCCCCCCCCC-
Confidence            9999999999999876655  9999999999999999999999999999999999999999999999999999999999 


Q ss_pred             HHHHHHHHHHhcChhhhhhHHHHHHHHHhhccCCCcCCceEecceeeeeeeCceeEEEEEEEEEeCCCCCHHHHHHhcCC
Q 007699          398 EEDEMLETQLLKDAKQCAEHVMLVDLGRNDVGKVARSGSVKVEKLMNVERYSHVMHISSTITGELQDRLSCWDALRAALP  477 (592)
Q Consensus       398 ~ed~~l~~~Ll~d~Ke~aEh~mvVDl~rndL~~v~~~gsV~V~~~~~v~~~~~v~HL~S~v~g~L~~~~~~~d~l~a~~P  477 (592)
                      ++|++++++|++|+||++||.||||++||||+++|.+|||+|+++|.||+|+|||||+|+|+|+|+++.+.+|+|+++||
T Consensus       286 ~eD~~l~~~Ll~d~Ke~aEh~miVDl~RndL~rvc~~gsV~V~~l~~ve~~~~V~HLvS~V~G~L~~~~~~~d~l~alfP  365 (457)
T 4grh_A          286 DDDAARIQELVGHPKERAEHVMLIDLERNDLGRICLPGTVVVDELMTVESYAHVHHIVSNVSGHLRPEVTPGEVIAATFP  365 (457)
T ss_dssp             CC-------------CCCEEEEECCTTCCSGGGTBCTTCCEEEEEEEEEETTEEEEEEEEEEEEBCTTCCHHHHHHHHCS
T ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhhcccCCCeEEeccceeEEEcCceEEEEeEEEEEECCCCCHHHHHHHhCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcchHHHHHHHHHhcCCCCCcceeeEEEEecCCceeEEEEeeeeEeecCccccccccchhhhcccCcEEEEEece
Q 007699          478 VGTVSGAPKVKAMELIDELEVNRRGPYSGGFGGVSFTGDMDIALALRTMVFQTGTRYDTMYSYKDARKRREWVAYLQAGA  557 (592)
Q Consensus       478 ~gavtGaPK~~AmeiI~~lE~~~Rg~Y~G~vG~i~~~G~~d~~v~IRt~~~~~~~~~~~~~~~~~~~~~~~~~~~l~AGa  557 (592)
                      +|||||+||++|||||+++|+.+||+|||+|||++++|++||+|+|||+++.                  ++.++++|||
T Consensus       366 ~gsvtGaPK~rAmeiI~elE~~~RG~Y~G~vG~i~~~G~~d~~V~IRt~~~~------------------~~~~~~~AGa  427 (457)
T 4grh_A          366 GGTITGCPKVRCMQIISELEQVPRGAYTGAFGWLNRDGDLDLNILIRTAEVD------------------GHEVSFRTGA  427 (457)
T ss_dssp             CSTTSEESHHHHHHHHHHHHCSCCTTTTCEEEEEETTSCEEEEECCSEEEEE------------------TTEEEEEEEE
T ss_pred             CccccCccHHHHHHHHHHhcCCCCcceEEEEEEEecCCCEEEEEEeeEEEEE------------------CCEEEEEeee
Confidence            9999999999999999999999999999999999999999999999999974                  4789999999


Q ss_pred             eccCCCCchHHHHHHHHHHHHHHHHHHH
Q 007699          558 GIVADSDPDDEHRECQNKAAGLARAIDL  585 (592)
Q Consensus       558 GIv~dS~p~~E~~Et~~K~~~l~~al~~  585 (592)
                      |||+||+|+.||+||++|+++|++||+.
T Consensus       428 GIV~dS~pe~E~~Et~~K~~~ll~al~~  455 (457)
T 4grh_A          428 GIVVDSDPDKELDETRAKARGLLRALGQ  455 (457)
T ss_dssp             EECTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred             EEeCCCChHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999853


No 2  
>1k0e_A P-aminobenzoate synthase component I; aminodeoxychorismate synthase, chorismate, glutamine, tryptophan, PABA synthase, lyase; HET: TRP; 2.00A {Escherichia coli} SCOP: d.161.1.1 PDB: 1k0g_A*
Probab=100.00  E-value=7.1e-107  Score=879.90  Aligned_cols=444  Identities=32%  Similarity=0.499  Sum_probs=374.5

Q ss_pred             EEEEEcCCCCCHHHHHHHhhccCCCCCCeEEEecCCCCCcccCCCceeEEEeCCceEEEEeCCeEEEEeCCCCceeeecc
Q 007699           89 LYRCIFSDHLTPVVAYRCLVQEDDREAPSFLFESVEPGVRVSNVGRYSVVGAQPVMEVIVKDNNVTIMDHEKGSLVEEVV  168 (592)
Q Consensus        89 ~~~~i~~d~lTPv~~y~~L~~~~~~~~~sfLLESa~~g~~~~~~gRYS~IG~~P~~~i~~~~~~v~v~~~~~~~~~~~~~  168 (592)
                      ..++++.+..+|+.+|.+|.+.    ..+|||||+..+   +.+|||||||++|..++..+++.+++...+  . .....
T Consensus         7 ~~~~l~~~~~~~~~~~~~l~~~----~~~~lLeS~~~~---~~~~r~S~ig~~p~~~~~~~~~~~~i~~~~--~-~~~~~   76 (453)
T 1k0e_A            7 AVITLLWRQDAAEFYFSRLSHL----PWAMLLHSGYAD---HPYSRFDIVVAEPICTLTTFGKETVVSESE--K-RTTTT   76 (453)
T ss_dssp             EEEEECCCTTHHHHHHTTTTTS----TTCEEEECTTCC---STTCCEEEEECSCSEEEEEETTEEEEEETT--E-EEEEC
T ss_pred             EEEEccCCCCCHHHHHHHhhCC----CCEEEEeCCCCC---CCCCceEEEEECCCEEEEEECCEEEEEcCC--c-eeecC
Confidence            4667888888898999998643    248999999986   789999999999999999999988876432  1 12234


Q ss_pred             CCcchHHHHhHhhcCCcccC--CCCccccCceeeeeccccchhhhcccCCCCCCCCCCCCcccEEEEeeCeEEEEeCCCC
Q 007699          169 DDPMEIPRKISEDWKPQIID--ELPEAFCGGWVGYFSYDTVRYVEKKKLPFSKAPHDDRSLADIHLGLYNDVLVFDHVEK  246 (592)
Q Consensus       169 ~dpl~~lr~~~~~~~~~~~~--~lP~~F~GG~vGyfsYD~~~~~E~~~lP~~~~~~~~~~~Pd~~f~l~d~vIvfDh~~~  246 (592)
                      ++|++.|+++++.++....+  ++|  |+||++||||||+++++|  ++|.  .+.++.++||+.|++|+++++|||.++
T Consensus        77 ~~~~~~l~~~~~~~~~~~~~~~~~p--f~gG~~Gy~~Yd~~~~~e--~l~~--~~~~~~~~Pd~~~~~~~~~iv~Dh~~~  150 (453)
T 1k0e_A           77 DDPLQVLQQVLDRADIRPTHNEDLP--FQGGALGLFGYDLGRRFE--SLPE--IAEQDIVLPDMAVGIYDWALIVDHQRH  150 (453)
T ss_dssp             SCHHHHHHHHHHHTTCCCCCCTTCS--CCSEEEEEECGGGGGGTS--CCCC--CSBCCCCCCSEEEEEESEEEEEETTTT
T ss_pred             CCHHHHHHHHHHhhcCCCCCccCCC--ccccEEEEEchhhhhhhh--cCCC--CCCCCCCCCcEEEEecCEEEEEECCCC
Confidence            79999999999988754322  444  999999999999999999  5663  245677899999999999999999999


Q ss_pred             EEEEEEeeccCccccHHHHHHHHHHHHHHHHHccccCcccccCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHcCCCcee
Q 007699          247 KVYVIHWVRLDQHSSVQKAYAEGLEHLEKLVARKVITRSIDLHTHHFGPPLKKSNMTSEAYKNAVLEAKEHIQAGDIFQI  326 (592)
Q Consensus       247 ~l~li~~~~~~~~~~~~~~~~~~~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~y~~~V~~~~~~I~~Gdi~qv  326 (592)
                      +++++++..      .+.    ..+.++.   ....+.. ..    .....+..++++++|+++|++++++|++||+|||
T Consensus       151 ~~~l~~~~~------~~~----~~~~l~~---~~~~~~~-~~----~~~~~~~~~~~~~~y~~~V~~~~~~I~~Gd~~qv  212 (453)
T 1k0e_A          151 TVSLLSHND------VNA----RRAWLES---QQFSPQE-DF----TLTSDWQSNMTREQYGEKFRQVQEYLHSGDCYQV  212 (453)
T ss_dssp             EEEEEESSC------HHH----HHHHHHH---CCCCCCC-CC----EECSCCEESSCHHHHHHHHHHHHHHHHTTSCSCE
T ss_pred             eEEEEEcCc------hHH----HHHHHHH---hhcCCCC-Cc----ccCccccccCCHHHHHHHHHHHHHHHHcCCceEE
Confidence            999987421      111    1112221   1111100 00    0012345788999999999999999999999999


Q ss_pred             eeeeEEeecCCCCHHHHHHHHHHhCCCCeEEEEecCCeEEEeecCceeEEEECCEEEEEecCCCCCCCCChHHHHHHHHH
Q 007699          327 VLSQRFERRTFADPFEVYRALRVVNPSPYMTYLQARGCILVASSPEILTRVKKNKIVNRPLAGTVRRGRTTEEDEMLETQ  406 (592)
Q Consensus       327 VLsrr~~~~~~~~p~~ly~~Lr~~nPs~y~~~~~~~~~~~vgaSPE~l~~~~~~~v~t~plAGT~~rg~~~~ed~~l~~~  406 (592)
                      ||||++..+...||+++|++||+.||+||+||+++++..++|+|||+|+++++++++|+|||||+|||.|+++|++++++
T Consensus       213 vLsr~~~~~~~~~~~~~y~~Lr~~np~py~~~~~~~~~~~~gaSPE~l~~~~~~~v~t~PiaGT~~Rg~~~~eD~~~~~~  292 (453)
T 1k0e_A          213 NLAQRFHATYSGDEWQAFLQLNQANRAPFSAFLRLEQGAILSLSPERFILCDNSEIQTRPIKGTLPRLPDPQEDSKQAVK  292 (453)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHHHCCTEEEEEECSSCEEEEEECCBCEEEETTEEEECCEEEEEEC-------------
T ss_pred             EeeeEEEccCCCCHHHHHHHHHHhCCCCEEEEEECCCCEEEEecchheEEEECCEEEEEecCCCCcCCCChHHhHHHHHH
Confidence            99999998888899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcChhhhhhHHHHHHHHHhhccCCCcCCceEecceeeeeeeCceeEEEEEEEEEeCCCCCHHHHHHhcCCCCCCCCcch
Q 007699          407 LLKDAKQCAEHVMLVDLGRNDVGKVARSGSVKVEKLMNVERYSHVMHISSTITGELQDRLSCWDALRAALPVGTVSGAPK  486 (592)
Q Consensus       407 Ll~d~Ke~aEh~mvVDl~rndL~~v~~~gsV~V~~~~~v~~~~~v~HL~S~v~g~L~~~~~~~d~l~a~~P~gavtGaPK  486 (592)
                      |++|+||++||.|||||+||||+++|.+|||+|+++|.||+|+|||||+|+|+|+|+++.+.+|+|+++||+|||||+||
T Consensus       293 Ll~~~Ke~aEh~miVDl~rndL~rv~~~GsV~V~~~~~ve~~~~V~HL~S~V~g~L~~~~~~~d~l~a~fP~gsvtGaPK  372 (453)
T 1k0e_A          293 LANSAKDRAENLMIVDLMRNDIGRVAVAGSVKVPELFVVEPFPAVHHLVSTITAQLPEQLHASDLLRAAFPGGSITGAPK  372 (453)
T ss_dssp             -CCCTTTTTHHHHHHHHHHHHHTTTSCTTCCEEEEEEEEEECSSEEEEEEEEEEECCTTSCHHHHHHHHCSCGGGTCSSH
T ss_pred             HhcCcHhHHHHHHHHHHHHHHhhcccCCCcEEeCCCceEEEeCCEEEeeeEEEEEECCCCCHHHHHHHcCCCccccChhH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCcceeeEEEEecCCceeEEEEeeeeEeecCccccccccchhhhcccCcEEEEEeceeccCCCCch
Q 007699          487 VKAMELIDELEVNRRGPYSGGFGGVSFTGDMDIALALRTMVFQTGTRYDTMYSYKDARKRREWVAYLQAGAGIVADSDPD  566 (592)
Q Consensus       487 ~~AmeiI~~lE~~~Rg~Y~G~vG~i~~~G~~d~~v~IRt~~~~~~~~~~~~~~~~~~~~~~~~~~~l~AGaGIv~dS~p~  566 (592)
                      ++||+||+++|+.+||+|||+|||++++|++||+|+|||+++.                  ++.++++||||||+||+|+
T Consensus       373 ~~AmeiI~elE~~~Rg~Y~G~vG~~~~~G~~d~~V~IRt~~~~------------------~~~~~~~aGaGIv~dS~pe  434 (453)
T 1k0e_A          373 VRAMEIIDELEPQRRNAWCGSIGYLSFCGNMDTSITIRTLTAI------------------NGQIFCSAGGGIVADSQEE  434 (453)
T ss_dssp             HHHHHHHHHHSSBCCTTTTSEEEEEETTSCEEEBCCCSEEEEE------------------TTEEEEEEEEEECTTCCHH
T ss_pred             HHHHHHHHHhcCCCCcceEEEEEEEecCCCEEEEEEeeEEEEE------------------CCEEEEEeCceEeCCCChH
Confidence            9999999999999999999999999999999999999999974                  4689999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 007699          567 DEHRECQNKAAGLARAID  584 (592)
Q Consensus       567 ~E~~Et~~K~~~l~~al~  584 (592)
                      .||+||++|+++|+++|+
T Consensus       435 ~E~~Et~~K~~~ll~al~  452 (453)
T 1k0e_A          435 AEYQETFDKVNRILKQLE  452 (453)
T ss_dssp             HHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            999999999999999984


No 3  
>1i1q_A Anthranilate synthase component I; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: d.161.1.1 PDB: 1i7q_A 1i7s_A*
Probab=100.00  E-value=1e-105  Score=882.89  Aligned_cols=463  Identities=31%  Similarity=0.436  Sum_probs=394.0

Q ss_pred             eEeEEEEEcCCCCCHHHHHHHhhccCCCCCCeEEEecCCCCCcccCCCceeEEEeCCceEEEEeCCeEEEEeCC-CC---
Q 007699           86 LVPLYRCIFSDHLTPVVAYRCLVQEDDREAPSFLFESVEPGVRVSNVGRYSVVGAQPVMEVIVKDNNVTIMDHE-KG---  161 (592)
Q Consensus        86 ~~p~~~~i~~d~lTPv~~y~~L~~~~~~~~~sfLLESa~~g~~~~~~gRYS~IG~~P~~~i~~~~~~v~v~~~~-~~---  161 (592)
                      +..+.+.++.+ .||+.+|.+|.+..   ..+|||||++++   +++|||||||++|..+|.++++.+++.... .+   
T Consensus         8 ~~~~~~~l~~~-~~p~~~~~~l~~~~---~~~~LLES~~~~---~~~~RyS~ig~~p~~~i~~~~~~~~i~~~~~~g~~~   80 (520)
T 1i1q_A            8 LELLTCDAAYR-ENPTALFHQVCGDR---PATLLLESADID---SKDDLKSLLLVDSALRITALGDTVTIQALSDNGASL   80 (520)
T ss_dssp             CEEEEEEECCC-SCHHHHHHHHHTTC---SSEEEEECCCGG---GCSSCEEEEEEEEEEEEEEETTEEEEEESSHHHHTH
T ss_pred             eEEEEEECCCC-CCHHHHHHHHhcCC---CCEEEEECCCCC---CCCCCeEEEEECCceEEEEECCEEEEEecCCCccch
Confidence            34455666554 89999999997432   248999999986   889999999999999999999998874211 00   


Q ss_pred             -------------------ceee--------------eccCCcchHHHHhHhhcCCcccCCCCccccCceeeeeccccch
Q 007699          162 -------------------SLVE--------------EVVDDPMEIPRKISEDWKPQIIDELPEAFCGGWVGYFSYDTVR  208 (592)
Q Consensus       162 -------------------~~~~--------------~~~~dpl~~lr~~~~~~~~~~~~~lP~~F~GG~vGyfsYD~~~  208 (592)
                                         ....              ...++|++.|+.+++.++....+++|. |+||   |||||+++
T Consensus        81 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~p~-f~GG---~~~Yd~~~  156 (520)
T 1i1q_A           81 LPLLDTALPAGVENDVLPAGRVLRFPPVSPLLDENARLCSLSVFDAFRLLQGVVNIPTQEREAM-FFGG---LFAYDLVA  156 (520)
T ss_dssp             HHHHHTTCCTTCEEEEETTEEEEECCCCCTTCCHHHHHTSCCTTHHHHHHHHTSBCCTTCTTSS-EEEE---EECGGGGG
T ss_pred             hhhhhhhcccceeeeccCcceeEEeccccccccccccccCCCHHHHHHHHHHHcCCCCccCCCc-eecc---hhhhHHHH
Confidence                               0000              012689999999999887654456665 8775   69999999


Q ss_pred             hhhcccCCCCCCCCCCCCcccEEEEeeCeEEEEeCCCCEEEEEEeeccCccccHHHHHHHHHHHHHHHHHccccCccccc
Q 007699          209 YVEKKKLPFSKAPHDDRSLADIHLGLYNDVLVFDHVEKKVYVIHWVRLDQHSSVQKAYAEGLEHLEKLVARKVITRSIDL  288 (592)
Q Consensus       209 ~~E~~~lP~~~~~~~~~~~Pd~~f~l~d~vIvfDh~~~~l~li~~~~~~~~~~~~~~~~~~~~rl~~l~~~~~~~~~~~~  288 (592)
                      ++|  ++|..   .++.++||+.|++|+++|+|||.+++++++.+...+.    +..++.+.++++.+......+... .
T Consensus       157 ~~e--~l~~~---~~~~~~Pd~~~~l~~~~lv~Dh~~~~~~l~~~~~~~~----~~~~~~~~~~l~~~~~~l~~~~~~-~  226 (520)
T 1i1q_A          157 GFE--ALPHL---EAGNNCPDYCFYLAETLMVIDHQKKSTRIQASLFTAS----DREKQRLNARLAYLSQQLTQPAPP-L  226 (520)
T ss_dssp             GTS--CCCCC---CCSSSCCSEEEEEEEEEEEEETTTTEEEEEEEECSCC----HHHHHHHHHHHHHHHHHHHSCCCC-C
T ss_pred             hhc--cCCCC---cCCCCCCCEEEEeeeEEEEEECCCCEEEEEEEecCCc----hHHHHHHHHHHHHHHHHhhccCCC-C
Confidence            999  46632   2456899999999999999999999999998764322    344555666666554431111100 0


Q ss_pred             CCCcCCCCCCCCCCChHHHHHHHHHHHHHHHcCCCceeeeeeEEeecCCCCHHHHHHHHHHhCCCCeEEEEecCCeEEEe
Q 007699          289 HTHHFGPPLKKSNMTSEAYKNAVLEAKEHIQAGDIFQIVLSQRFERRTFADPFEVYRALRVVNPSPYMTYLQARGCILVA  368 (592)
Q Consensus       289 ~~~~~~~~~~~~~~~~e~y~~~V~~~~~~I~~Gdi~qvVLsrr~~~~~~~~p~~ly~~Lr~~nPs~y~~~~~~~~~~~vg  368 (592)
                      .........+..++++++|+++|++++++|++||+|||||||++..... +|+++|++||+.||+||+||++.+++.|+|
T Consensus       227 ~~~~~~~~~~~~~~~~~~y~~~V~~~~~~I~~Gd~~qvvlsr~~~~~~~-~p~~~y~~Lr~~npspy~~~~~~~~~~~~g  305 (520)
T 1i1q_A          227 PVTPVPDMRCECNQSDDAFGAVVRQLQKAIRAGEIFQVVPSRRFSLPCP-SPLAAYYVLKKSNPSPYMFFMQDNDFTLFG  305 (520)
T ss_dssp             CCCCCTTCCCEESSCHHHHHHHHHHHHHHHHTTSCSEECCEEEEEEECS-CHHHHHHHHHHHSCCSEEEEEECSSCEEEE
T ss_pred             CcccccccccccCCCHHHHHHHHHHHHHHHHcCCCeEEeeeeeeccccC-CHHHHHHHHHHHCCCCeEEEEECCCcEEEE
Confidence            0000112235678899999999999999999999999999999988764 999999999999999999999999999999


Q ss_pred             ecCceeEEEE--CCEEEEEecCCCCCCCCCh------HHHHHHHHHHhcChhhhhhHHHHHHHHHhhccCCCcCCceEec
Q 007699          369 SSPEILTRVK--KNKIVNRPLAGTVRRGRTT------EEDEMLETQLLKDAKQCAEHVMLVDLGRNDVGKVARSGSVKVE  440 (592)
Q Consensus       369 aSPE~l~~~~--~~~v~t~plAGT~~rg~~~------~ed~~l~~~Ll~d~Ke~aEh~mvVDl~rndL~~v~~~gsV~V~  440 (592)
                      ||||+|++++  +++|+|+|||||+|||+++      ++|.+++++|++|+||++||.|||||+||||+++|.||||+|+
T Consensus       306 aSPE~ll~~~~~~~~v~t~PiaGT~~Rg~~~~~~~d~~eD~~l~~~Ll~d~Ke~aEh~miVDl~RndL~rv~~~gsV~V~  385 (520)
T 1i1q_A          306 ASPESSLKYDAASRQIEIYPIAGTRPRGRRADGTLDRDLDSRIELDMRTDHKELSEHLMLVDLARNDLARICTPGSRYVA  385 (520)
T ss_dssp             EESSCSEEEETTTTEEEECCEEEEEECCBCTTSCBCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHBCTTCCEEE
T ss_pred             eCchhheeEeccCCEEEEEeccCCCCCCCCcccccChhHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCCceeec
Confidence            9999999986  7899999999999999987      9999999999999999999999999999999999999999999


Q ss_pred             ceeeeeeeCceeEEEEEEEEEeCCCCCHHHHHHhcCCCCCCCCcchHHHHHHHHHhcCCCCCcceeeEEEEecCCceeEE
Q 007699          441 KLMNVERYSHVMHISSTITGELQDRLSCWDALRAALPVGTVSGAPKVKAMELIDELEVNRRGPYSGGFGGVSFTGDMDIA  520 (592)
Q Consensus       441 ~~~~v~~~~~v~HL~S~v~g~L~~~~~~~d~l~a~~P~gavtGaPK~~AmeiI~~lE~~~Rg~Y~G~vG~i~~~G~~d~~  520 (592)
                      ++|.||+|+|||||+|+|+|+|+++.+.+|+++++||+|||||+||++||+||+++|+.+||+|||+|||++++|++||+
T Consensus       386 ~~~~ve~~~~V~HLvS~V~g~L~~~~~~~d~l~a~fP~gsvtGaPK~rAmeiI~elE~~~RG~Y~G~vG~~~~~G~~d~~  465 (520)
T 1i1q_A          386 DLTKVDRYSYVMHLVSRVVGELRHDLDALHAYRACMNMGTLSGAPKVRAMQLIADAEGQRRGSYGGAVGYFTAHGDLDTC  465 (520)
T ss_dssp             EEEEEEECSSEEEEEEEEEEEBCTTCCHHHHHHHHCSCGGGSEESHHHHHHHHHHHHCSCCTTTTSEEEEEETTSCEEEE
T ss_pred             CcceEEEcCCEEEEEeEEEEEECCCCCHHHHHHHhCCCCccccccHHHHHHHHHHhcCCCCcceEEEEEEEecCCCEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeeeeEeecCccccccccchhhhcccCcEEEEEeceeccCCCCchHHHHHHHHHHHHHHHHHHHHHh
Q 007699          521 LALRTMVFQTGTRYDTMYSYKDARKRREWVAYLQAGAGIVADSDPDDEHRECQNKAAGLARAIDLAES  588 (592)
Q Consensus       521 v~IRt~~~~~~~~~~~~~~~~~~~~~~~~~~~l~AGaGIv~dS~p~~E~~Et~~K~~~l~~al~~a~~  588 (592)
                      |+|||+++.                  ++.++++||||||+||+|+.||+||++|+++|++||..++.
T Consensus       466 V~IRt~~~~------------------~~~~~~~AGaGIV~dS~pe~E~~Et~~K~~~ll~al~~a~~  515 (520)
T 1i1q_A          466 IVIRSALVE------------------NGIATVQAGAGIVLDSVPQSEADETRNKARAVLRAIATAHH  515 (520)
T ss_dssp             ECCSEEEEE------------------TTEEEEEEECCBCTTCCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             EEeeEEEEE------------------CCEEEEEeCcEEeCCCChHHHHHHHHHHHHHHHHHHHHhhh
Confidence            999999974                  46899999999999999999999999999999999998864


No 4  
>1qdl_A Protein (anthranilate synthase (TRPE-subunit)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: d.161.1.1
Probab=100.00  E-value=2.3e-106  Score=868.99  Aligned_cols=417  Identities=38%  Similarity=0.563  Sum_probs=366.6

Q ss_pred             EEE-cCCCCCHHHHHHHhhccCCCCCCeEEEecCCCCCcccCCCceeEEEeCCceEEEEeCCeEEEEeCCCCceeeeccC
Q 007699           91 RCI-FSDHLTPVVAYRCLVQEDDREAPSFLFESVEPGVRVSNVGRYSVVGAQPVMEVIVKDNNVTIMDHEKGSLVEEVVD  169 (592)
Q Consensus        91 ~~i-~~d~lTPv~~y~~L~~~~~~~~~sfLLESa~~g~~~~~~gRYS~IG~~P~~~i~~~~~~v~v~~~~~~~~~~~~~~  169 (592)
                      +++ ++|..||+.+|.+|.+..   ..+|||||+..+   +.+|||||||++|..++..                   .+
T Consensus         3 ~~~~~~d~~~p~~~~~~l~~~~---~~~~lLeS~~~~---~~~~r~s~ig~~p~~~~~~-------------------~~   57 (422)
T 1qdl_A            3 EVHPISEFASPFEVFKCIERDF---KVAGLLESIGGP---QYKARYSVIAWSTNGYLKI-------------------HD   57 (422)
T ss_dssp             EEEEGGGSCCHHHHHHHHHHHC---SEEEEEECC----------CEEEEEECSSCCEEE-------------------CS
T ss_pred             eEecCCccCCHHHHHHHHhcCC---CCEEEEECCCCC---CCCCceeEEEECCceEEEE-------------------CC
Confidence            344 578999999999997542   248999999886   7889999999999876543                   15


Q ss_pred             CcchHHHHhHhhcCCcccCCCCccccCceeeeeccccchhhhcccCCCCCCCCCCCCcccEEEEeeCeEEEEeCCCCEEE
Q 007699          170 DPMEIPRKISEDWKPQIIDELPEAFCGGWVGYFSYDTVRYVEKKKLPFSKAPHDDRSLADIHLGLYNDVLVFDHVEKKVY  249 (592)
Q Consensus       170 dpl~~lr~~~~~~~~~~~~~lP~~F~GG~vGyfsYD~~~~~E~~~lP~~~~~~~~~~~Pd~~f~l~d~vIvfDh~~~~l~  249 (592)
                      +|++.|+++++.+.... +++|  |+||++||||||+++++|  .+|.  .+.++.++||+.|++|+.+++|||.+++++
T Consensus        58 ~~~~~l~~~~~~~~~~~-~~lp--f~gg~~G~~~Yd~~~~~e--~~~~--~~~~~~~~P~~~~~~~~~~~~~d~~~~~~~  130 (422)
T 1qdl_A           58 DPVNILNGYLKDLKLAD-IPGL--FKGGMIGYISYDAVRFWE--KIRD--LKPAAEDWPYAEFFTPDNIIIYDHNEGKVY  130 (422)
T ss_dssp             CHHHHHHTTTTTCCCCC-CSSS--CSSEEEEEECGGGGGGTS--CCCC--CSCBSSCCCSEEEECCSEEEEEEGGGTEEE
T ss_pred             CHHHHHHHHHHhccCCC-cCCC--ccccEEEEEEHHHhhhhc--cccC--CCCCCCCCCCEEEEcCCEEEEEECCCCeEE
Confidence            89999999998877543 5565  999999999999999999  4553  235667899999999999999999999999


Q ss_pred             EEEeeccCccccHHHHHHHHHHHHHHHHHccccCcccccCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHcCCCceeeee
Q 007699          250 VIHWVRLDQHSSVQKAYAEGLEHLEKLVARKVITRSIDLHTHHFGPPLKKSNMTSEAYKNAVLEAKEHIQAGDIFQIVLS  329 (592)
Q Consensus       250 li~~~~~~~~~~~~~~~~~~~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~y~~~V~~~~~~I~~Gdi~qvVLs  329 (592)
                      ++.+...               .|    ....+. .       .....+..++++++|+++|++++++|++||+||||||
T Consensus       131 l~~~~~~---------------~l----~~~~~~-~-------~~~~~~~~~~~~~~y~~~V~~~~~~I~~Gd~~qvvLs  183 (422)
T 1qdl_A          131 VNADLSS---------------VG----GCGDIG-E-------FKVSFYDESLNKNSYERIVSESLEYIRSGYIFQVVLS  183 (422)
T ss_dssp             EESCCSC---------------SC----CSCSCC-C-------EEEEEEEEESCHHHHHHHHHHHHHHHHHTSCSEEEEE
T ss_pred             EEEccHH---------------Hh----hCcCcC-C-------ccccccccCCCHHHHHHHHHHHHHHHHcCCceEEEEe
Confidence            8764311               00    000000 0       0011234678999999999999999999999999999


Q ss_pred             eEEeecCCCCHHHHHHHHHHhCCCCeEEEEecCCeEEEeecCceeEEEECCEEEEEecCCCCCCCCChHHHHHHHHHHhc
Q 007699          330 QRFERRTFADPFEVYRALRVVNPSPYMTYLQARGCILVASSPEILTRVKKNKIVNRPLAGTVRRGRTTEEDEMLETQLLK  409 (592)
Q Consensus       330 rr~~~~~~~~p~~ly~~Lr~~nPs~y~~~~~~~~~~~vgaSPE~l~~~~~~~v~t~plAGT~~rg~~~~ed~~l~~~Ll~  409 (592)
                      |++......||+++|++||+.||+||+||++.++..|+|+|||+|+++++++++|+|||||+|||.|++||++++++|++
T Consensus       184 r~~~~~~~~~~~~~y~~Lr~~np~py~~~~~~~~~~~~gaSPE~l~~~~~~~v~t~PiaGT~~Rg~~~~eD~~~~~~Ll~  263 (422)
T 1qdl_A          184 RFYRYIFSGDPLRIYYNLRRINPSPYMFYLKFDEKYLIGSSPELLFRVQDNIVETYPIAGTRPRGADQEEDLKLELELMN  263 (422)
T ss_dssp             EEEEEEEEECTHHHHHHHHHHSCCSEEEEEEETTEEEEEEESCEEEEEETTEEEECCEEEEEECCSSHHHHHHHHHHHHT
T ss_pred             EEEEecCCCCHHHHHHHHHHhCccCEEEEEECCCCEEEEeCchheEEEECCEEEEEecCCCCCCCCChHHHHHHHHHHhc
Confidence            99998888899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChhhhhhHHHHHHHHHhhccCCCcCCceEecceeeeeeeCceeEEEEEEEEEeCCCCCHHHHHHhcCCCCCCCCcchHHH
Q 007699          410 DAKQCAEHVMLVDLGRNDVGKVARSGSVKVEKLMNVERYSHVMHISSTITGELQDRLSCWDALRAALPVGTVSGAPKVKA  489 (592)
Q Consensus       410 d~Ke~aEh~mvVDl~rndL~~v~~~gsV~V~~~~~v~~~~~v~HL~S~v~g~L~~~~~~~d~l~a~~P~gavtGaPK~~A  489 (592)
                      |+||++||.||||++||||+++|.+|+|+|+++|.||+|+|||||+|+|+|+|+++.+.+|+|+++||+|||||+||++|
T Consensus       264 s~Ke~aEh~miVDl~rndL~~v~~~GsV~V~~~~~ve~~~~V~HL~S~V~g~L~~~~~~~d~l~alfP~gsvtGaPK~rA  343 (422)
T 1qdl_A          264 SEKDKAEHLMLVDLARNDLGKVCVPGTVKVPELMYVEKYSHVQHIVSKVIGTLKKKYNALNVLSATFPAGTVSGAPKPMA  343 (422)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTBCTTCCEEEEEEEEEECSSEEEEEEEEEEEBCTTCCHHHHHHHHCSCGGGSEESHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHhhcCCCcEEeCCCceEEEcCceEEeeeEEEEEECCCCCHHHHHHHhCCCccccCccHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCcceeeEEEEecCCceeEEEEeeeeEeecCccccccccchhhhcccCcEEEEEeceeccCCCCchHHH
Q 007699          490 MELIDELEVNRRGPYSGGFGGVSFTGDMDIALALRTMVFQTGTRYDTMYSYKDARKRREWVAYLQAGAGIVADSDPDDEH  569 (592)
Q Consensus       490 meiI~~lE~~~Rg~Y~G~vG~i~~~G~~d~~v~IRt~~~~~~~~~~~~~~~~~~~~~~~~~~~l~AGaGIv~dS~p~~E~  569 (592)
                      ||||+++|+.+||+|||+|||++++|++||+|+|||+++.                  ++.++++||||||+||+|+.||
T Consensus       344 meiI~elE~~~RG~Y~G~vG~~~~~G~~d~~V~IRt~~~~------------------~~~~~~~aGaGIv~dS~pe~E~  405 (422)
T 1qdl_A          344 MNIIETLEEYKRGPYAGAVGFISADGNAEFAIAIRTAFLN------------------KELLRIHAGAGIVYDSNPESEY  405 (422)
T ss_dssp             HHHHHHHSSSBCTTTTEEEEEEETTSCEEEEEECSEEEEE------------------TTEEEEEEEEEECTTCCHHHHH
T ss_pred             HHHHHHhcCCCCCceeEEEEEEecCCCEEEEEEeeEEEEE------------------CCEEEEEEcceEeCCCChHHHH
Confidence            9999999999999999999999999999999999999974                  4689999999999999999999


Q ss_pred             HHHHHHHHHHHHHHH
Q 007699          570 RECQNKAAGLARAID  584 (592)
Q Consensus       570 ~Et~~K~~~l~~al~  584 (592)
                      +||++|+++|++||+
T Consensus       406 ~Et~~K~~~ll~al~  420 (422)
T 1qdl_A          406 FETEHKLKALKTAIG  420 (422)
T ss_dssp             HHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999999999985


No 5  
>3h9m_A P-aminobenzoate synthetase, component I; para-aminobenzoate synthetase, cytophaga hutchinsonii,YP_678417.1, CHU_1808; HET: PGE; 1.57A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00  E-value=2e-100  Score=821.90  Aligned_cols=398  Identities=24%  Similarity=0.375  Sum_probs=329.1

Q ss_pred             CeEEEecCCCCCccc-CCCcee-EEEeCCceEE-EEeCCeEEEEeCCCCceeeeccCCcchHHHHhHhhcCCcccCCCCc
Q 007699          116 PSFLFESVEPGVRVS-NVGRYS-VVGAQPVMEV-IVKDNNVTIMDHEKGSLVEEVVDDPMEIPRKISEDWKPQIIDELPE  192 (592)
Q Consensus       116 ~sfLLESa~~g~~~~-~~gRYS-~IG~~P~~~i-~~~~~~v~v~~~~~~~~~~~~~~dpl~~lr~~~~~~~~~~~~~lP~  192 (592)
                      ..+||||...+   . .+|||| ++|.+|..+| ..                  ..+||++.|++++..+          
T Consensus        29 ~~~lL~S~~~~---~~~~~ry~~l~a~g~~~~~~~~------------------~~~~~~~~l~~~~~~~----------   77 (436)
T 3h9m_A           29 HIAYLNPNGYT---AYPQGAFRHYLAFGSEAAIHVS------------------DATRVFETWNEIKKGY----------   77 (436)
T ss_dssp             EEEEEECTTCT---TSTTCSCCCEEEECCSEEEEEC------------------CTTSHHHHHHHHHHHS----------
T ss_pred             eEEEEeCCCCC---CCCCCCeeEEEEECcEEEEEEc------------------CCCCHHHHHHHHHHhc----------
Confidence            48999999875   6 789998 8899898763 21                  0258999999887653          


Q ss_pred             cccC-ceeeeeccccchhhhcccCCCCCCCCCCCCcccEEEEeeCeEEEEeCCCCEEEEEEeeccCccccHHHHHHHHHH
Q 007699          193 AFCG-GWVGYFSYDTVRYVEKKKLPFSKAPHDDRSLADIHLGLYNDVLVFDHVEKKVYVIHWVRLDQHSSVQKAYAEGLE  271 (592)
Q Consensus       193 ~F~G-G~vGyfsYD~~~~~E~~~lP~~~~~~~~~~~Pd~~f~l~d~vIvfDh~~~~l~li~~~~~~~~~~~~~~~~~~~~  271 (592)
                        .| |++||||||+++++|  ++|.  .+.++.++||+.|++|+.+|+|||.  +++++.    +   +.++.+    +
T Consensus        78 --~g~~~~Gy~~YD~~~~~E--~l~~--~~~~~~~~Pd~~~~~~~~~l~~d~~--~~~l~~----~---~~~~~~----~  138 (436)
T 3h9m_A           78 --TNEWIFVFASYDGKNSVE--QLHT--SKEAGIAFAAATFFIPEHVWEIQPD--GILIHK----G---SGSSLV----T  138 (436)
T ss_dssp             --TTSCEEEEECGGGGGGTS--SCCC--CSCBSSCCCSEEEEECSEEEEEETT--EEEEEE----S---SCHHHH----H
T ss_pred             --CCCeEEEEECcccccccc--cCCC--CCCCCcCCCcEEEEeeeEEEEEECC--EEEEEc----C---CHHHHH----H
Confidence              24 789999999999999  5763  3567889999999999999999985  777651    1   122222    2


Q ss_pred             HHHHHHHccccCcccccCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHcCCCceeeeeeEEeecCCCCHHHHHHHHHHhC
Q 007699          272 HLEKLVARKVITRSIDLHTHHFGPPLKKSNMTSEAYKNAVLEAKEHIQAGDIFQIVLSQRFERRTFADPFEVYRALRVVN  351 (592)
Q Consensus       272 rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~y~~~V~~~~~~I~~Gdi~qvVLsrr~~~~~~~~p~~ly~~Lr~~n  351 (592)
                      +|+.+...   ....      .....+.+++++++|+++|++++++|++||++||||||++......||+++|++||..|
T Consensus       139 ~l~~~~~~---~~~~------~~~~~~~~~~~~~~y~~~V~~~~~~I~~Gd~~qvvLsr~~~~~~~~dp~~~y~~Lr~~n  209 (436)
T 3h9m_A          139 EIQHAEPS---TPVQ------QSDIFVKQVVSKESYFNAFDELQQIIAQGDAYEINYCIPFTAKGNISPAATYQRLNKKT  209 (436)
T ss_dssp             HHHHC----------------CCCCCCEESSCHHHHHHHHHHHHHHHHTTSCSEEEEEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHhcccc---CCCc------cCCccccccCCHHHHHHHHHHHHHHHHcCCCcEEEEEEEEEecCCCCHHHHHHHHHHhC
Confidence            33322110   0000      11234567899999999999999999999999999999999888899999999999999


Q ss_pred             CCCeEEEEecCCeEEEeecCceeEEEECCEEEEEecCCCCCCCCChHHHHHHHHHHhcChhhhhhHHHHHHHHHhhccCC
Q 007699          352 PSPYMTYLQARGCILVASSPEILTRVKKNKIVNRPLAGTVRRGRTTEEDEMLETQLLKDAKQCAEHVMLVDLGRNDVGKV  431 (592)
Q Consensus       352 Ps~y~~~~~~~~~~~vgaSPE~l~~~~~~~v~t~plAGT~~rg~~~~ed~~l~~~Ll~d~Ke~aEh~mvVDl~rndL~~v  431 (592)
                      |+||+||++.++..|+|||||+|+++++++++|+|||||+|||.|+++|.+++++|++|+||++||.||||++||||+++
T Consensus       210 Pspy~~~~~~~~~~~vgaSPE~lv~~~~~~v~t~PiAGT~~Rg~~~~eD~~l~~~Ll~d~Ke~aEh~mvVDl~RndL~rv  289 (436)
T 3h9m_A          210 PMPFSVYYKFNTEYILSASPERFIKKTGDTIISQPIKGTSKRGKSKAEDEMLKQQLGTSEKEQSENTMIVDLVRNDLSRT  289 (436)
T ss_dssp             CCTTEEEEEETTEEEEECCCCEEEEEETTEEEECCBCCCC-------------------HHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCceEEEEECCCCEEEEEchHHheEEECCEEEEEecCCCCCCCcCHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcCCceEecceeeeeeeCceeEEEEEEEEEeCCCCCHHHHHHhcCCCCCCCCcchHHHHHHHHHhcCCCCCcceeeEEEE
Q 007699          432 ARSGSVKVEKLMNVERYSHVMHISSTITGELQDRLSCWDALRAALPVGTVSGAPKVKAMELIDELEVNRRGPYSGGFGGV  511 (592)
Q Consensus       432 ~~~gsV~V~~~~~v~~~~~v~HL~S~v~g~L~~~~~~~d~l~a~~P~gavtGaPK~~AmeiI~~lE~~~Rg~Y~G~vG~i  511 (592)
                      |.+|||+|+++|.||+|+|||||+|+|+|+|+++.+.+|+|+++||+|||||+||++||+||+++|+.+||+|||+|||+
T Consensus       290 ~~~gsV~V~~~~~ve~~~~V~HLvS~V~g~L~~~~~~~dll~alfP~gsvtGaPK~rAmeiI~elE~~~RG~Y~G~vG~i  369 (436)
T 3h9m_A          290 AVAGSVCVPELSGLYTFPNVHQLISTVQSTIDPACSSIDVIQQAFPMGSMTGAPKVNVMKFIDRIESMARGPFSGTVGYM  369 (436)
T ss_dssp             BCTTCCEEEEEEEEEECSSCEEEEEEEEEEBCTTSCHHHHHHHTCSCGGGSEESHHHHHHHHHHHSSSBCTTTTCEEEEE
T ss_pred             cCCCeEEeCCcceEEEcCceEEEEeEEEEEECCCCCHHHHHHHhCCCccccChhHHHHHHHHHHhcCCCCCceEEEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCceeEEEEeeeeEeecCccccccccchhhhcccCcEEEEEeceeccCCCCchHHHHHHHHHHHHHHHHHHHHHh
Q 007699          512 SFTGDMDIALALRTMVFQTGTRYDTMYSYKDARKRREWVAYLQAGAGIVADSDPDDEHRECQNKAAGLARAIDLAES  588 (592)
Q Consensus       512 ~~~G~~d~~v~IRt~~~~~~~~~~~~~~~~~~~~~~~~~~~l~AGaGIv~dS~p~~E~~Et~~K~~~l~~al~~a~~  588 (592)
                      +++|++||+|+|||+++.+                .++.++++||||||+||+|+.||+||++|+++|++||+.-++
T Consensus       370 ~~~G~~d~~V~IRt~~~~~----------------~~~~~~~~AGaGIVadS~Pe~E~~Et~~K~~all~al~~~~~  430 (436)
T 3h9m_A          370 DPHDNFDFNVLIRSIFYNS----------------ATQELFMEAGSAITSYAKAETEYEECLLKITPMIHILNNQEG  430 (436)
T ss_dssp             CTTSCEEEECCCSEEEEET----------------TTTEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHHTC----
T ss_pred             ecCCCEEEEEEeeEEEEEC----------------CCCEEEEEeeeeEcCCCChHHHHHHHHHHHHHHHHHHhhccc
Confidence            9999999999999999853                346899999999999999999999999999999999976654


No 6  
>2fn0_A Salicylate synthetase, IRP9; salicylate synthase, siderophore, transcription; 1.85A {Yersinia enterocolitica} SCOP: d.161.1.1 PDB: 2fn1_A*
Probab=100.00  E-value=2e-97  Score=803.41  Aligned_cols=422  Identities=24%  Similarity=0.320  Sum_probs=351.3

Q ss_pred             EcCCCCCHHHHHHHhhccCCCCCCeEEEecCCCCCcccCCCceeEEEeCCceEEEEeCCeEEE--EeCCCCceeeeccCC
Q 007699           93 IFSDHLTPVVAYRCLVQEDDREAPSFLFESVEPGVRVSNVGRYSVVGAQPVMEVIVKDNNVTI--MDHEKGSLVEEVVDD  170 (592)
Q Consensus        93 i~~d~lTPv~~y~~L~~~~~~~~~sfLLESa~~g~~~~~~gRYS~IG~~P~~~i~~~~~~v~v--~~~~~~~~~~~~~~d  170 (592)
                      +..+..||+.+|.+|..... ....|||||  .       +|| +||++|..++..+++...+  ...+  .......++
T Consensus        12 ~~~~~~tPl~~~~~l~~~~~-~~~~~l~es--~-------~~~-~ig~g~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~   78 (437)
T 2fn0_A           12 LALPEEQWLPTISGVLRQFA-EEECYVYER--P-------PCW-YLGKGCQARLHINADGTQATFIDDA--GEQKWAVDS   78 (437)
T ss_dssp             ----CTTHHHHHHHHHHHTT-TSCEEEEEE--T-------TEE-EEEESCSEEEEECTTSCCEEEEETT--EEEEECCSC
T ss_pred             ccCCCCCHHHHHHHHhcCCC-CCcEEEEEc--C-------CCE-EEEECCcEEEEEeCCEEEEEeecCC--ceeeeccCC
Confidence            55677899999999975421 124799998  2       378 6899999999988765544  3221  111111258


Q ss_pred             cchHHHHhHhhcCCcccCCCCccccCceeeeeccccchhhhcccCCCCCCCCCCCCcccEEEEeeCeEEEEeCCCCEEEE
Q 007699          171 PMEIPRKISEDWKPQIIDELPEAFCGGWVGYFSYDTVRYVEKKKLPFSKAPHDDRSLADIHLGLYNDVLVFDHVEKKVYV  250 (592)
Q Consensus       171 pl~~lr~~~~~~~~~~~~~lP~~F~GG~vGyfsYD~~~~~E~~~lP~~~~~~~~~~~Pd~~f~l~d~vIvfDh~~~~l~l  250 (592)
                      |++.++.+++.        .|. |.||++||||||+++++|  .++..     ..++||+.|++|+.++++||  +++++
T Consensus        79 ~~~~l~~~~~~--------~~~-~~~g~~G~~~yd~~~~~e--~~~~~-----~~~~p~~~~~lp~~~~~~d~--~~~~l  140 (437)
T 2fn0_A           79 IADCARRFMAH--------PQV-KGRRVYGQVGFNFAAHAR--GIAFN-----AGEWPLLTLTVPREELIFEK--GNVTV  140 (437)
T ss_dssp             HHHHHHHHHTS--------TTT-TTSCEEEEECTHHHHHHH--TCCCC-----CCSSCSEEEEECSEEEEEET--TEEEE
T ss_pred             HHHHHHHHHHh--------ccc-cCceEEEEEeeccchhhc--CCCcc-----CCCCCcEEEEeeeEEEEEEC--CEEEE
Confidence            99999887654        232 789999999999999999  45421     24689999999999999999  67777


Q ss_pred             EEeeccCccccHHHHHHHHHHHHHHHHHccccCcccccCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHcCCCceeeeee
Q 007699          251 IHWVRLDQHSSVQKAYAEGLEHLEKLVARKVITRSIDLHTHHFGPPLKKSNMTSEAYKNAVLEAKEHIQAGDIFQIVLSQ  330 (592)
Q Consensus       251 i~~~~~~~~~~~~~~~~~~~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~y~~~V~~~~~~I~~Gdi~qvVLsr  330 (592)
                      +.+.  +     +    .+.++++.++....+.....        .....++++++|+++|++++++|++||++||||||
T Consensus       141 ~~~~--~-----~----~~~~~~~~~l~~~~~~~~~~--------~~~~~~~~~~~y~~~V~~~~~~I~~Gd~~qvvLsr  201 (437)
T 2fn0_A          141 YADS--A-----D----GCRRLCEWVKEASTTTQNAP--------LAVDTALNGEAYKQQVARAVAEIRRGEYVKVIVSR  201 (437)
T ss_dssp             ECC--------------------------------CB--------CCCCTTTTHHHHHHHHHHHHHHHHTTSCSEEEEEE
T ss_pred             EEcC--c-----H----HHHHHHHHHHhccccCCCCC--------CcccccCCHHHHHHHHHHHHHHHHcCCCcEEEeee
Confidence            6431  1     0    11222332222111000000        01122679999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHHHHhCCCCeEEEEecCCeEEEeecCceeEEEECCEEEEEecCCCCCCCCChHHHHHHHHHHhcC
Q 007699          331 RFERRTFADPFEVYRALRVVNPSPYMTYLQARGCILVASSPEILTRVKKNKIVNRPLAGTVRRGRTTEEDEMLETQLLKD  410 (592)
Q Consensus       331 r~~~~~~~~p~~ly~~Lr~~nPs~y~~~~~~~~~~~vgaSPE~l~~~~~~~v~t~plAGT~~rg~~~~ed~~l~~~Ll~d  410 (592)
                      ++......+|+++|++||..||+||+||++.++..++|||||+|+++++++++|+|||||+|||.|+++|++++++|++|
T Consensus       202 ~~~~~~~~~~~~~y~~lr~~np~~y~~~~~~~~~~~~gaSPE~l~~~~~~~v~t~piaGT~~Rg~~~~eD~~l~~~Ll~d  281 (437)
T 2fn0_A          202 AIPLPSRIDMPATLLYGRQANTPVRSFMFRQEGREALGFSPELVMSVTGNKVVTEPLAGTRDRMGNPEHNKAKEAELLHD  281 (437)
T ss_dssp             EEECSSCCCHHHHHHHHHHTCCCSEEEEEEETTEEEEEEECSEEEEEETTEEEECCEEEEEECCSCHHHHHHHHHHHHHC
T ss_pred             EEeccCCCCHHHHHHHHHhhCCCCeEEEEEcCCCEEEEECchhheEEECCEEEEEeecCCCCCCCChHHHHHHHHHHhcC
Confidence            99988889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhHHHHHHHHHhhccCCCcCCceEecceeeeeeeCceeEEEEEEEEEeCCCCCHHHHHHhcCCCCCCCCcchHHHH
Q 007699          411 AKQCAEHVMLVDLGRNDVGKVARSGSVKVEKLMNVERYSHVMHISSTITGELQDRLSCWDALRAALPVGTVSGAPKVKAM  490 (592)
Q Consensus       411 ~Ke~aEh~mvVDl~rndL~~v~~~gsV~V~~~~~v~~~~~v~HL~S~v~g~L~~~~~~~d~l~a~~P~gavtGaPK~~Am  490 (592)
                      +||++||.||||++||||+++|.+|||+|+++|.||+|+|||||+|+|+|+|+++.+.+|+|+++||+|||||+||++||
T Consensus       282 ~Ke~aEh~mvVDl~rndL~~v~~~gsV~V~~~~~v~~~~~V~HL~S~V~g~L~~~~~~~d~l~al~P~gsvtGaPK~~Am  361 (437)
T 2fn0_A          282 SKEVLEHILSVKEAIAELEAVCLPGSVVVEDLMSVRQRGSVQHLGSGVSGQLAENKDAWDAFTVLFPSITASGIPKNAAL  361 (437)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHBCTTCCEEEEEEEEEEETTEEEEEEEEEEEBCTTCCHHHHHHHHCSCGGGSEESHHHHH
T ss_pred             cHhHHHHHHHHHHHHHHHhhhcCCCcEEeCCCceEEEcCceEEeeeEEEEEECCCCCHHHHHHHcCCCccccCccHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcceeeEEEEecCCceeEEEEeeeeEeecCccccccccchhhhcccCcEEEEEeceeccCCCCchHHHH
Q 007699          491 ELIDELEVNRRGPYSGGFGGVSFTGDMDIALALRTMVFQTGTRYDTMYSYKDARKRREWVAYLQAGAGIVADSDPDDEHR  570 (592)
Q Consensus       491 eiI~~lE~~~Rg~Y~G~vG~i~~~G~~d~~v~IRt~~~~~~~~~~~~~~~~~~~~~~~~~~~l~AGaGIv~dS~p~~E~~  570 (592)
                      +||+++|+.+||+|||+|||++++ ++||+|+|||+++.                  ++.++++||||||+||+|+.||+
T Consensus       362 eiI~elE~~~Rg~Y~G~vG~~~~~-~~d~~V~IRt~~~~------------------~~~~~l~aGaGIV~dS~pe~E~~  422 (437)
T 2fn0_A          362 NAIMQIEKTPRELYSGAILLLDDT-RFDAALVLRSVFQD------------------SQRCWIQAGAGIIAQSTPERELT  422 (437)
T ss_dssp             HHHHHHCCSCCTTTTCEEEEEETT-EEEEEECCSEEEEC------------------SSCEEEEEEEEECTTCCHHHHHH
T ss_pred             HHHHHhcCCCCCceeEEEEEEECC-CcEEEEEeeEEEEE------------------CCEEEEEeCceEcCCCChHHHHH
Confidence            999999999999999999999999 99999999999974                  46799999999999999999999


Q ss_pred             HHHHHHHHHHHHH
Q 007699          571 ECQNKAAGLARAI  583 (592)
Q Consensus       571 Et~~K~~~l~~al  583 (592)
                      ||++|+++|+++|
T Consensus       423 Et~~K~~~ll~~L  435 (437)
T 2fn0_A          423 ETREKLASIAPYL  435 (437)
T ss_dssp             HHHHHHTTTGGGC
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999999875


No 7  
>3log_A Isochorismate synthase/isochorismate-pyruvate LYA; salicylate, anthranilate, isochor synthase, isochorismate lyase, ION transport; 1.73A {Mycobacterium tuberculosis} SCOP: d.161.1.1 PDB: 3veh_A* 3st6_A* 3rv8_A* 2i6y_A 2g5f_A 3rv6_A* 3rv7_A* 3rv9_A*
Probab=100.00  E-value=1.3e-96  Score=795.08  Aligned_cols=396  Identities=23%  Similarity=0.273  Sum_probs=349.0

Q ss_pred             CCCceeEEEeCCceEEEEeCCeEEEEeCCCCceeeeccCCcchHHHHhHhhcCCcccCCCCccccCceeeeeccccchhh
Q 007699          131 NVGRYSVVGAQPVMEVIVKDNNVTIMDHEKGSLVEEVVDDPMEIPRKISEDWKPQIIDELPEAFCGGWVGYFSYDTVRYV  210 (592)
Q Consensus       131 ~~gRYS~IG~~P~~~i~~~~~~v~v~~~~~~~~~~~~~~dpl~~lr~~~~~~~~~~~~~lP~~F~GG~vGyfsYD~~~~~  210 (592)
                      +.||||| |++|.+.|.++++.+++...+ ........+||++.+++++..+        |. +.||++||||||+++++
T Consensus        52 ~~g~~s~-g~~~~a~i~~~~~~~~~~~~g-~~~~~~~~~~p~~~l~~~~~~~--------~~-~~~g~~Gy~~yd~~~~~  120 (451)
T 3log_A           52 CDGQWVL-AAGVQAMVELDSDELRVIRDG-VTRRQQWSGRPGAALGEAVDRL--------LL-ETDQAFGWVAFEFGVHR  120 (451)
T ss_dssp             ETTEEEE-EEEEEEEEEEETTEEEEEETT-EEEEECCCSCHHHHHHHHHHHH--------HH-HCSEEEEEECGGGGSGG
T ss_pred             cCCeEEE-EeCCeEEEEEECCEEEEEECC-eeEEEecCCCHHHHHHHHHhhC--------Cc-cCCcEEEEEChhHhHhh
Confidence            4679999 889999999999999987632 1112234579999999998764        33 67899999999999999


Q ss_pred             hcccCCCCCCCCCCCCcccEEEEeeCeEEEEeCCCCEEEEEEeeccCccccHHHHHHHHHHHHHHHHHccccCcccccCC
Q 007699          211 EKKKLPFSKAPHDDRSLADIHLGLYNDVLVFDHVEKKVYVIHWVRLDQHSSVQKAYAEGLEHLEKLVARKVITRSIDLHT  290 (592)
Q Consensus       211 E~~~lP~~~~~~~~~~~Pd~~f~l~d~vIvfDh~~~~l~li~~~~~~~~~~~~~~~~~~~~rl~~l~~~~~~~~~~~~~~  290 (592)
                      |  ++|..  ..  .++||++|++|+.+++|||  ++++++..   +     +.    .++++..++....+... .   
T Consensus       121 e--~l~~~--~~--~~~P~~~l~~p~~~iv~d~--~~~~l~~~---~-----~~----~l~~l~~~l~~~~~~~~-~---  176 (451)
T 3log_A          121 Y--GLQQR--LA--PHTPLARVFSPRTRIMVSE--KEIRLFDA---G-----IR----HREAIDRLLATGVREVP-Q---  176 (451)
T ss_dssp             G--TCGGG--SC--TTCEEEEEEEEEEEEEECS--SEEEEESC---C-----HH----HHHHHHHHHHHCCCCCC-C---
T ss_pred             c--ccccc--CC--CCCCeEEEEeeEEEEEEeC--CEEEEEcC---C-----HH----HHHHHHHHHhccCCCCC-C---
Confidence            9  45421  12  2689999999999999999  68888732   1     11    22334444443221110 0   


Q ss_pred             CcCCCCCCCCCCChHHHHHHHHHHHHHHHcCCCceeeeeeEEeecCCCCHHHHHHHHHHhCCCCeEEEEecCCeEEEeec
Q 007699          291 HHFGPPLKKSNMTSEAYKNAVLEAKEHIQAGDIFQIVLSQRFERRTFADPFEVYRALRVVNPSPYMTYLQARGCILVASS  370 (592)
Q Consensus       291 ~~~~~~~~~~~~~~e~y~~~V~~~~~~I~~Gdi~qvVLsrr~~~~~~~~p~~ly~~Lr~~nPs~y~~~~~~~~~~~vgaS  370 (592)
                          ......++++++|+++|++++++|++||++||||||++..+...||+.+|++||..||+||+||+++++..++|+|
T Consensus       177 ----~~~~~~~~~~~~y~~~V~~a~~~I~~Gd~~kVVLsr~~~~~~~~d~~~~y~~lr~~np~py~f~~~~~~~~~vGaS  252 (451)
T 3log_A          177 ----SRSVDVSDDPSGFRRRVAVAVDEIAAGRYHKVILSRCVEVPFAIDFPLTYRLGRRHNTPVRSFLLQLGGIRALGYS  252 (451)
T ss_dssp             ----CCCCCCCCCTTCHHHHHHHHHHHHHTTSCSEEEEEEEEECSSCBCHHHHHHHHHTTCCCSEEEEEEETTEEEEEEE
T ss_pred             ----CCcccccCCHHHHHHHHHHHHHHHHcCCceEEEeeeEEeccCCCCHHHHHHHHHhhCCCCeEEEEEcCCCceeccC
Confidence                1224567899999999999999999999999999999999888999999999999999999999999999999999


Q ss_pred             CceeEEEE-CCEEEEEecCCCCCCCCChHHHHHHHHHHhcChhhhhhHHHHHHHHHhhccCCCcCCceEecceeeeeeeC
Q 007699          371 PEILTRVK-KNKIVNRPLAGTVRRGRTTEEDEMLETQLLKDAKQCAEHVMLVDLGRNDVGKVARSGSVKVEKLMNVERYS  449 (592)
Q Consensus       371 PE~l~~~~-~~~v~t~plAGT~~rg~~~~ed~~l~~~Ll~d~Ke~aEh~mvVDl~rndL~~v~~~gsV~V~~~~~v~~~~  449 (592)
                      ||+|++++ +++++|+|||||+|||.++++|++++++|++|+||++||.||||++||||+++|.+|+|+|+++|.|++|+
T Consensus       253 PE~lv~~~~~~~v~t~PiAGT~~Rg~~~~eD~~l~~~Ll~d~Ke~aEh~mvVDl~rndL~~vc~~gsV~V~~~~~v~~~~  332 (451)
T 3log_A          253 PELVTAVRADGVVITEPLAGTRALGRGPAIDRLARDDLESNSKEIVEHAISVRSSLEEITDIAEPGSAAVIDFMTVRERG  332 (451)
T ss_dssp             CSEEEEECTTSEEEECCEEEEEECSSCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTBCTTCCEEEEEEEEEEET
T ss_pred             ccceEEEecCCEEEEEeCCCCcCCCCChHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCceEEEcC
Confidence            99999998 79999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeEEEEEEEEEeCCCCCHHHHHHhcCCCCCCCCcchHHHHHHHHHhcCCCCCcceeeEEEEecCCceeEEEEeeeeEee
Q 007699          450 HVMHISSTITGELQDRLSCWDALRAALPVGTVSGAPKVKAMELIDELEVNRRGPYSGGFGGVSFTGDMDIALALRTMVFQ  529 (592)
Q Consensus       450 ~v~HL~S~v~g~L~~~~~~~d~l~a~~P~gavtGaPK~~AmeiI~~lE~~~Rg~Y~G~vG~i~~~G~~d~~v~IRt~~~~  529 (592)
                      |||||+|+|+|+|+++.+.+|+|+++||+|||||+||++||++|+++|+.+||+|||+|||++++|++||+|+|||+++.
T Consensus       333 ~V~HL~S~V~G~L~~~~~~~dll~alfPtgavtGaPK~~AmeiI~elE~~~RG~Y~G~vG~i~~~G~~d~~V~IRt~~~~  412 (451)
T 3log_A          333 SVQHLGSTIRARLDPSSDRMAALEALFPAVTASGIPKAAGVEAIFRLDECPRGLYSGAVVMLSADGGLDAALTLRAAYQV  412 (451)
T ss_dssp             TEEEEEEEEEEEBCTTCCHHHHHHHTCSCGGGSEESHHHHHHHHHHHSCSCCTTTTSEEEEEETTSCEEEEECCSEEEEE
T ss_pred             cEEEEEEEEEEEECCCCCHHHHHHHhCCCccccCCChHHHHHHHHHhCCCCCccEEEEEEEEECCCCEEEEEEeeEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999974


Q ss_pred             cCccccccccchhhhcccCcEEEEEeceeccCCCCchHHHHHHHHHHHHHHHHH
Q 007699          530 TGTRYDTMYSYKDARKRREWVAYLQAGAGIVADSDPDDEHRECQNKAAGLARAI  583 (592)
Q Consensus       530 ~~~~~~~~~~~~~~~~~~~~~~~l~AGaGIv~dS~p~~E~~Et~~K~~~l~~al  583 (592)
                                        ++.++++||||||+||+|+.||+||++|+++|+++|
T Consensus       413 ------------------~~~~~l~AGaGIV~dS~Pe~E~~Et~~K~~~l~~~L  448 (451)
T 3log_A          413 ------------------GGRTWLRAGAGIIEESEPEREFEETCEKLSTLTPYL  448 (451)
T ss_dssp             ------------------TTEEEEEEEEEECTTCCHHHHHHHHHHHHTTTGGGC
T ss_pred             ------------------CCEEEEEEeeeEeCCCChHHHHHHHHHHHHHHHHHh
Confidence                              468999999999999999999999999999998765


No 8  
>3hwo_A Isochorismate synthase ENTC; chorismate-utilizing enzymes, siderophore, enterobactin, enterobactin biosynthesis, ION T iron, iron transport; HET: ISC; 2.30A {Escherichia coli}
Probab=100.00  E-value=2.8e-80  Score=659.39  Aligned_cols=267  Identities=23%  Similarity=0.296  Sum_probs=257.3

Q ss_pred             CCCCChHHHHHHHHHHHHHHHcCCCceeeeeeEEeecC--CCCHHHHHHHHHHhCCCCeEEEEec-CCeEEEeecCceeE
Q 007699          299 KSNMTSEAYKNAVLEAKEHIQAGDIFQIVLSQRFERRT--FADPFEVYRALRVVNPSPYMTYLQA-RGCILVASSPEILT  375 (592)
Q Consensus       299 ~~~~~~e~y~~~V~~~~~~I~~Gdi~qvVLsrr~~~~~--~~~p~~ly~~Lr~~nPs~y~~~~~~-~~~~~vgaSPE~l~  375 (592)
                      ...+++++|+++|++++++|++||++||||||++....  ..||+.+|++||..||+||+||++. ++..|+|+|||+|+
T Consensus       124 ~~~~~~~~y~~~V~~~~~~I~~Gd~~kVVLsr~~~~~~~~~~d~~~l~~~Lr~~np~~y~f~~~~~~~~~~vgaSPE~lv  203 (394)
T 3hwo_A          124 QAIPEQTTFEQMVARAAALTATPQVDKVVLSRLIDITTDAAIDSGVLLERLIAQNPVSYNFHVPLADGGVLLGASPELLL  203 (394)
T ss_dssp             EEESCHHHHHHHHHHHHHHHHSSSCSEEEEEEEEEEEESSCCCHHHHHHHHHHHCSSSEEEEEECSSSCEEEEEECCEEE
T ss_pred             ccCCCHHHHHHHHHHHHHHHHcCCCeEEEeeeEEEEecCCCCCHHHHHHHHHHhCCcceEEEEEcCCCCEEEEECchheE
Confidence            45689999999999999999999999999999987653  5799999999999999999999998 78899999999999


Q ss_pred             EEECCEEEEEecCCCCCCCCChHHHHHHHHHHhcChhhhhhHHHHHHHHHhhccCCCcCCceEecceeeeeeeCceeEEE
Q 007699          376 RVKKNKIVNRPLAGTVRRGRTTEEDEMLETQLLKDAKQCAEHVMLVDLGRNDVGKVARSGSVKVEKLMNVERYSHVMHIS  455 (592)
Q Consensus       376 ~~~~~~v~t~plAGT~~rg~~~~ed~~l~~~Ll~d~Ke~aEh~mvVDl~rndL~~v~~~gsV~V~~~~~v~~~~~v~HL~  455 (592)
                      ++++++++|+|||||++|+.++++|.+++++|++|+||++||.||||++||||+++|.  +|+|+++|.+++|++||||+
T Consensus       204 ~~~~~~v~t~PiAGT~~R~~~~~eD~~~~~~Ll~s~Ke~aEh~mvVDlirndL~~vc~--~v~V~~~~~v~~~~~V~HL~  281 (394)
T 3hwo_A          204 RKDGERFSSIPLAGSARRQPDEVLDREAGNRLLASEKDRHEHELVTQAMKEVLRERSS--ELHVPSSPQLITTPTLWHLA  281 (394)
T ss_dssp             EEETTEEEEECEEEEEECCSSTTTTTTHHHHHHHCHHHHHHHHHHHHHHHHHHHTTEE--EEECCSSCEEEECSSEEEEE
T ss_pred             EEeCCEEEEEeCCCCcCCCCChhHhHHHHHHHhcChhHHHHHHHHHHHHHHHHHhhCC--CceECCceEEEEcCcEEEEE
Confidence            9999999999999999999999999999999999999999999999999999999998  68899999999999999999


Q ss_pred             EEEEEEeCCCCCHHHHHHhcCCCCCCCCcchHHHHHHHHHhcCCCCCcceeeEEEEecCCceeEEEEeeeeEeecCcccc
Q 007699          456 STITGELQDRLSCWDALRAALPVGTVSGAPKVKAMELIDELEVNRRGPYSGGFGGVSFTGDMDIALALRTMVFQTGTRYD  535 (592)
Q Consensus       456 S~v~g~L~~~~~~~d~l~a~~P~gavtGaPK~~AmeiI~~lE~~~Rg~Y~G~vG~i~~~G~~d~~v~IRt~~~~~~~~~~  535 (592)
                      |+|+|+|+++.+.+|+++++||+|||||+||++||+||+++|+++||+|||+|||++.+|++||+|+|||+++.      
T Consensus       282 S~V~G~l~~~~~~~dll~al~PtgaVtGaPK~~AmeiI~elE~~~RG~Y~G~vG~~~~~G~~d~~V~IRt~~~~------  355 (394)
T 3hwo_A          282 TPFEGKANSQENALTLACLLHPTPALSGFPHQAATQVIAELEPFDRELFGGIVGWCDSEGNGEWVVTIRCAKLR------  355 (394)
T ss_dssp             CCEEEEECTTCCHHHHHHHHCSCTTTSEESHHHHHHHHHHHCSSCCTTTTSEEEEEETTSCEEEEECCSEEEEE------
T ss_pred             eEEEEEECCCCCHHHHHHHcCCCccccCchHHHHHHHHHHhcCCCCcceeEEEEEEecCCCEEEEEEEEEEEEE------
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999984      


Q ss_pred             ccccchhhhcccCcEEEEEeceeccCCCCchHHHHHHHHHHHHHHHHHHH
Q 007699          536 TMYSYKDARKRREWVAYLQAGAGIVADSDPDDEHRECQNKAAGLARAIDL  585 (592)
Q Consensus       536 ~~~~~~~~~~~~~~~~~l~AGaGIv~dS~p~~E~~Et~~K~~~l~~al~~  585 (592)
                                  ++.++++||||||+||+|+.||+||++|+++|++||++
T Consensus       356 ------------~~~~~l~AGaGIV~dS~Pe~E~~Et~~K~~~~l~alg~  393 (394)
T 3hwo_A          356 ------------ENQVRLFAGAGIVPASSPLGEWRETGVKLSTMLNVFGL  393 (394)
T ss_dssp             ------------TTEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred             ------------CCEEEEEeccEEcCCCChHHHHHHHHHHHHHHHHHhCC
Confidence                        46899999999999999999999999999999999863


No 9  
>3os6_A Isochorismate synthase DHBC; structural genomics, center for structural genomics of infec diseases, csgid, isomerase; HET: MSE 15P; 2.40A {Bacillus anthracis}
Probab=100.00  E-value=5.1e-80  Score=658.97  Aligned_cols=270  Identities=28%  Similarity=0.388  Sum_probs=256.7

Q ss_pred             CCCCChHHHHHHHHHHHHHHHcCCCceeeeeeEEeecC--CCCHHHHHHHHHHhCCCCeEEEEecC------CeEEEeec
Q 007699          299 KSNMTSEAYKNAVLEAKEHIQAGDIFQIVLSQRFERRT--FADPFEVYRALRVVNPSPYMTYLQAR------GCILVASS  370 (592)
Q Consensus       299 ~~~~~~e~y~~~V~~~~~~I~~Gdi~qvVLsrr~~~~~--~~~p~~ly~~Lr~~nPs~y~~~~~~~------~~~~vgaS  370 (592)
                      .+.+++++|++.|++++++|++||++||||||++....  ..||+.+|++||..||+||+||++++      +..|+|+|
T Consensus       116 ~~~~~~~~y~~~V~~~~~~I~~Gd~~kVVLsr~~~~~~~~~~d~~~l~~~Lr~~np~~y~f~~~~~~~~~~~~~~~vgaS  195 (399)
T 3os6_A          116 TPVPDHEVYMKGVKQGIEKIKDGDLKKIVLSRSLDVKSSGKIDKQKLLRELAEHNKHGYTFAVNLPKDENENSKTLIGAS  195 (399)
T ss_dssp             EEESCHHHHHHHHHHHHHHHHTTSCSEEEEEEEEEEEESSCCCHHHHHHHHHHTCSSSEEEEEEECCCCC--CEEEEEEE
T ss_pred             ecCCCHHHHHHHHHHHHHHHHcCCCeEEEeeeEEEEECCCCCCHHHHHHHHHHhCCCceEEEEECCCcccCCCCEEEEeC
Confidence            45689999999999999999999999999999988754  48999999999999999999999875      35799999


Q ss_pred             CceeEEEECCEEEEEecCCCCCCCCChHHHHHHHHHHhcChhhhhhHHHHHHHHHhhccCCCcCCceEecceeeeeeeCc
Q 007699          371 PEILTRVKKNKIVNRPLAGTVRRGRTTEEDEMLETQLLKDAKQCAEHVMLVDLGRNDVGKVARSGSVKVEKLMNVERYSH  450 (592)
Q Consensus       371 PE~l~~~~~~~v~t~plAGT~~rg~~~~ed~~l~~~Ll~d~Ke~aEh~mvVDl~rndL~~v~~~gsV~V~~~~~v~~~~~  450 (592)
                      ||+|+++++++|+|+|||||+|||.++++|++++++|++|+||++||.||||++||||+++|.  +++|+++|.+++|++
T Consensus       196 PE~lv~~~~~~v~t~PiAGT~~Rg~~~~eD~~~~~~Ll~s~Ke~aEh~mvVDlirndL~~vc~--~v~V~~~~~v~~~~~  273 (399)
T 3os6_A          196 PELLVSRHGMQVISNPLAGSRPRSDDPVEDKRRAEELLSSPKDLHEHAVVVEAVAAALRPYCH--TLYVPEKPSVIHSEA  273 (399)
T ss_dssp             CCEEEEEETTEEEECCEEEEEECCSSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHGGGEE--EEECCSSCEEEECSS
T ss_pred             cchheEEeCCEEEEEECCCCcCCCCChhHhHHHHHHHhcChHHHHHHHHHHHHHHHHHHhhCC--CceeCCceEEEEeCC
Confidence            999999999999999999999999999999999999999999999999999999999999998  478899999999999


Q ss_pred             eeEEEEEEEEEeCC-CCCHHHHHHhcCCCCCCCCcchHHHHHHHHHhcCCCCCcceeeEEEEecCCceeEEEEeeeeEee
Q 007699          451 VMHISSTITGELQD-RLSCWDALRAALPVGTVSGAPKVKAMELIDELEVNRRGPYSGGFGGVSFTGDMDIALALRTMVFQ  529 (592)
Q Consensus       451 v~HL~S~v~g~L~~-~~~~~d~l~a~~P~gavtGaPK~~AmeiI~~lE~~~Rg~Y~G~vG~i~~~G~~d~~v~IRt~~~~  529 (592)
                      ||||+|+|+|+|++ +.+.+|+++++||+|||||+||++||+||+++|+++||+|||+|||++.+|++||+|+|||+++.
T Consensus       274 v~HL~S~V~G~L~~~~~~~~dll~al~PtgavtGaPK~~AmeiI~elE~~~RG~Y~G~vG~~~~~G~~d~~V~IRt~~~~  353 (399)
T 3os6_A          274 MWHLSTEVKGELKNPNTSSLELAIALHPTPAVCGTPMEEAREAIQKIEPFDREFFTGMLGWSDLNGDGEWIVTIRCAEVQ  353 (399)
T ss_dssp             EEEEECCEEEEESCTTCCHHHHHHHHCSCTTTSEESHHHHHHHHHHHCSSCCTTTTCEEEEEETTSCEEEEECCSEEEEE
T ss_pred             EEEEEEEEEEEECCCCCCHHHHHHHcCCCccccChhHHHHHHHHHHhCCCCCcceEEEEEEEecCCCEEEEEEeeEEEEE
Confidence            99999999999997 99999999999999999999999999999999999999999999999999999999999999974


Q ss_pred             cCccccccccchhhhcccCcEEEEEeceeccCCCCchHHHHHHHHHHHHHHHHHHHHHh
Q 007699          530 TGTRYDTMYSYKDARKRREWVAYLQAGAGIVADSDPDDEHRECQNKAAGLARAIDLAES  588 (592)
Q Consensus       530 ~~~~~~~~~~~~~~~~~~~~~~~l~AGaGIv~dS~p~~E~~Et~~K~~~l~~al~~a~~  588 (592)
                                        ++.++++||||||+||+|+.||+||++|+++|++||++++.
T Consensus       354 ------------------~~~~~l~AGaGIV~dSdPe~E~~Et~~K~~~~l~al~~~~~  394 (399)
T 3os6_A          354 ------------------ENTLRLYAGAGVVAESKPEDELAETSAKFQTMLKALGLNDS  394 (399)
T ss_dssp             ------------------TTEEEEEEEEEECTTCCHHHHHHHHHHHTHHHHHHTTCC--
T ss_pred             ------------------CCEEEEEeccEEcCCCChHHHHHHHHHHHHHHHHHHhcChh
Confidence                              46899999999999999999999999999999999987654


No 10 
>3bzm_A Menaquinone-specific isochorismate synthase; isomerase, menaquinone biosynthesis; HET: CIT; 1.95A {Escherichia coli} SCOP: d.161.1.1 PDB: 2eua_A* 3bzn_A
Probab=100.00  E-value=8.1e-78  Score=650.31  Aligned_cols=320  Identities=24%  Similarity=0.288  Sum_probs=272.8

Q ss_pred             EEeeCeEEEEeCCCCEEEEEEeeccCccccHHHHHHHHHHHHHHHHHccccCcccccCCCcCCCCCCCCCCChHHHHHHH
Q 007699          232 LGLYNDVLVFDHVEKKVYVIHWVRLDQHSSVQKAYAEGLEHLEKLVARKVITRSIDLHTHHFGPPLKKSNMTSEAYKNAV  311 (592)
Q Consensus       232 f~l~d~vIvfDh~~~~l~li~~~~~~~~~~~~~~~~~~~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~y~~~V  311 (592)
                      |++|+..++.++..-.+++..+.  +  .+..+.+...++.++.+..  ..+.+ ...   .........+++++|++.|
T Consensus       107 ~~lP~~~~~~~~~~~~l~~~~~~--~--~~~~~~~~~~~~~~~~~~~--~~~~~-~~~---~~~~~~~~~~~~~~y~~~V  176 (431)
T 3bzm_A          107 LLLPRLEWRRCGGKATLRLTLFS--E--SSLQHDAIQAKEFIATLVS--IKPLP-GLH---LTTTREQHWPDKTGWTQLI  176 (431)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEEE--S--SCHHHHHHHHHHHHHHCCC--CCCCC-CCC---CCEEEEEEESCHHHHHHHH
T ss_pred             EEeceEEEEEECCeEEEEEEecc--c--chhHHHHHHHHHHHHhccc--CCCCC-ccc---ccceecccCCCHHHHHHHH
Confidence            88898888887755444443322  1  2233333333333332210  00000 000   0000123467999999999


Q ss_pred             HHHHHHHHcCCCceeeeeeEEeec--CCCCHHHHHHHHHHhCCCCeEEEEecC-CeEEEeecCceeEEEECCEEEEEecC
Q 007699          312 LEAKEHIQAGDIFQIVLSQRFERR--TFADPFEVYRALRVVNPSPYMTYLQAR-GCILVASSPEILTRVKKNKIVNRPLA  388 (592)
Q Consensus       312 ~~~~~~I~~Gdi~qvVLsrr~~~~--~~~~p~~ly~~Lr~~nPs~y~~~~~~~-~~~~vgaSPE~l~~~~~~~v~t~plA  388 (592)
                      ++++++|++||++||||||++...  ...||+.+|++||..||+||+||++++ +..|+|+|||+|++++++++.|+|||
T Consensus       177 ~~~~~~I~~G~~~kvvLsr~~~~~~~~~~~~~~~~~~lr~~np~~y~~~~~~~~~~~~~gaSPE~l~~~~~~~v~t~pla  256 (431)
T 3bzm_A          177 ELATKTIAEGELDKVVLARATDLHFASPVNAAAMMAASRRLNLNCYHFYMAFDGENAFLGSSPERLWRRRDKALRTEALA  256 (431)
T ss_dssp             HHHHHHHHHSSCCEEEEEEEEEEEESSCCCHHHHHHHHHHHSCSSEEEEEECSSSEEEEEEECCEEEEEETTEEEEEEEE
T ss_pred             HHHHHHHHcCCceEEEeccEEEEecCCCCCHHHHHHHhhHhCCCceEEEEEcCCCCEEEEcCccceEEEeCCEEEEEeec
Confidence            999999999999999999998753  568999999999999999999999986 57899999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhcChhhhhhHHHHHHHHHhhccCCCcCCceEecceeeeeeeCceeEEEEEEEEEeCCCCCH
Q 007699          389 GTVRRGRTTEEDEMLETQLLKDAKQCAEHVMLVDLGRNDVGKVARSGSVKVEKLMNVERYSHVMHISSTITGELQDRLSC  468 (592)
Q Consensus       389 GT~~rg~~~~ed~~l~~~Ll~d~Ke~aEh~mvVDl~rndL~~v~~~gsV~V~~~~~v~~~~~v~HL~S~v~g~L~~~~~~  468 (592)
                      ||+|||.++++|++++++|++|+||++||.||||++||||+++|.  +|+|+. |.|++|+|||||+|+|+|+|+++ +.
T Consensus       257 GT~~r~~~~~eD~~~~~~Ll~s~Ke~aEh~mvVDlirndL~~~~~--~v~V~~-~~v~~~~~v~HL~S~V~g~L~~~-~~  332 (431)
T 3bzm_A          257 GTVANNPDDKQAQQLGEWLMADDKNQRENMLVVEDICQRLQADTQ--TLDVLP-PQVLRLRKVQHLRRCIWTSLNKA-DD  332 (431)
T ss_dssp             EEEECCSSHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHTTBS--CCEECC-CEEEECSSEEEEEEEEEEEBSSC-CH
T ss_pred             CCCCCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhCC--ceEECC-cEEEEeCcEEEEeeEEEEEECCC-CH
Confidence            999999999999999999999999999999999999999999995  889955 99999999999999999999999 99


Q ss_pred             HHHHHhcCCCCCCCCcchHHHHHHHHHhcCCCCCcceeeEEEEecCCceeEEEEeeeeEeecCccccccccchhhhcccC
Q 007699          469 WDALRAALPVGTVSGAPKVKAMELIDELEVNRRGPYSGGFGGVSFTGDMDIALALRTMVFQTGTRYDTMYSYKDARKRRE  548 (592)
Q Consensus       469 ~d~l~a~~P~gavtGaPK~~AmeiI~~lE~~~Rg~Y~G~vG~i~~~G~~d~~v~IRt~~~~~~~~~~~~~~~~~~~~~~~  548 (592)
                      +|+++++||+|||||+||.+||++|+++|+++||+|||+|||++.+ ++||+|+|||+++.                  +
T Consensus       333 ~d~l~al~P~~avtGaPk~~A~~~I~~lE~~~RG~Y~G~vG~~~~~-~~d~~V~IRt~~~~------------------~  393 (431)
T 3bzm_A          333 VICLHQLQPTAAVAGLPRDLARQFIARHEPFTREWYAGSAGYLSLQ-QSEFCVSLRSAKIS------------------G  393 (431)
T ss_dssp             HHHHHHHSSCTTTTEESHHHHHHHHHHHCSSCCTTTTSEEEEECSS-EEEEEECCSEEEEE------------------T
T ss_pred             HHHHHHhCCCcccCCCcHHHHHHHHHHhcCCCCcceEEEEEEEECC-CCEEEEEEEEEEEE------------------C
Confidence            9999999999999999999999999999999999999999999986 89999999999984                  4


Q ss_pred             cEEEEEeceeccCCCCchHHHHHHHHHHHHHHHHHH
Q 007699          549 WVAYLQAGAGIVADSDPDDEHRECQNKAAGLARAID  584 (592)
Q Consensus       549 ~~~~l~AGaGIv~dS~p~~E~~Et~~K~~~l~~al~  584 (592)
                      +.++++||||||+||+|++||+||++|+++|+++|+
T Consensus       394 ~~~~l~aGaGIv~dS~pe~E~~Et~~K~~~ll~al~  429 (431)
T 3bzm_A          394 NVVRLYAGAGIVRGSDPEQEWQEIDNKAAGLRTLLQ  429 (431)
T ss_dssp             TEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             CEEEEEeCceecCCCChHHHHHHHHHHHHHHHHHhc
Confidence            689999999999999999999999999999999874


No 11 
>3gse_A Menaquinone-specific isochorismate synthase; MENF,yersinia P CO92, YPO2528, csgid, isomerase, structural genomics; 2.28A {Yersinia pestis} SCOP: d.161.1.0
Probab=100.00  E-value=1.4e-78  Score=657.92  Aligned_cols=351  Identities=23%  Similarity=0.260  Sum_probs=278.9

Q ss_pred             ccCceeeeeccccchhhhcccCCCCCCCCCCCCcccEEEEeeCeEEEEeCCCCEEEEEEeeccCccccHHHHHHHHHHHH
Q 007699          194 FCGGWVGYFSYDTVRYVEKKKLPFSKAPHDDRSLADIHLGLYNDVLVFDHVEKKVYVIHWVRLDQHSSVQKAYAEGLEHL  273 (592)
Q Consensus       194 F~GG~vGyfsYD~~~~~E~~~lP~~~~~~~~~~~Pd~~f~l~d~vIvfDh~~~~l~li~~~~~~~~~~~~~~~~~~~~rl  273 (592)
                      ++||    |+||......+ ...  .....|..+|.+.|++|...+......-.+.+..+  .+  .+..+....+++.|
T Consensus        97 ~~Gg----~~Fd~~~~~~~-~~~--~~~~~W~~f~~~~f~LP~~~l~~~~~~~~l~~n~~--~~--~~~~~~~~~~~~~l  165 (458)
T 3gse_A           97 IWGL----NAFEPVMVFGQ-LTD--NGLVSGKNAQASFLFLPRLEILRRGKKTSLTLNLS--SE--TSLQKDALQAITFI  165 (458)
T ss_dssp             EEEE----EEEEEECC----------------CCEEEEEEEEEEEEEEETTEEEEEEEEE--ES--SCHHHHHHHHHHHH
T ss_pred             EEEc----cccCCcccccc-ccc--ccccccccCCCEEEEcceEEEEEECCeEEEEEEEe--cC--CccHHHHHHHHHHH
Confidence            5666    89987432110 000  12355788999999999998887765444443332  22  12333333444444


Q ss_pred             HHHHHccccCcccccCCCcCCCCCCCCCCChHHHHHHHHHHHHHHHcCCCceeeeeeEEeec--CCCCHHHHHHHHHHhC
Q 007699          274 EKLVARKVITRSIDLHTHHFGPPLKKSNMTSEAYKNAVLEAKEHIQAGDIFQIVLSQRFERR--TFADPFEVYRALRVVN  351 (592)
Q Consensus       274 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~y~~~V~~~~~~I~~Gdi~qvVLsrr~~~~--~~~~p~~ly~~Lr~~n  351 (592)
                      +.+....  +.+ .+..   ........+++++|+++|++++++|++||++||||||++...  ...||+++|++||..|
T Consensus       166 ~~l~~~~--~~~-~~~~---~~~~~~~~~~~~~y~~~V~~~~~~I~~Gd~~kVvLsr~~~~~~~~~~~~~~~~~~lr~~n  239 (458)
T 3gse_A          166 DQLMAAR--ALP-VLNA---RIQHSSHTPGYPQWRNLIQQALNDIEQQKLDKVVLARTTTLTLNKPLSCAAFMAASRQVN  239 (458)
T ss_dssp             HTCCCCC--CCC-CCCC---EEEEEEEESCHHHHHHHHHHHHHHHC---CCEEEEEEEEEEEESSCCCHHHHHHHHHHHC
T ss_pred             HhccccC--CCC-CCcc---ccccCcCCCCHHHHHHHHHHHHHHHHcCCceEEEcccEEEEEeCCCCCHHHHHHHHHHhC
Confidence            4332110  000 0000   000123467999999999999999999999999999997654  4679999999999999


Q ss_pred             CCCeEEEEecC-CeEEEeecCceeEEEECCEEEEEecCCCCCCCCChHHHHHHHHHHhcChhhhhhHHHHHHHHHhhccC
Q 007699          352 PSPYMTYLQAR-GCILVASSPEILTRVKKNKIVNRPLAGTVRRGRTTEEDEMLETQLLKDAKQCAEHVMLVDLGRNDVGK  430 (592)
Q Consensus       352 Ps~y~~~~~~~-~~~~vgaSPE~l~~~~~~~v~t~plAGT~~rg~~~~ed~~l~~~Ll~d~Ke~aEh~mvVDl~rndL~~  430 (592)
                      |+||+||++++ +..|+|+|||+|++++++++.|+|||||++||.++++|.+++++|++|+||++||.||||++||||++
T Consensus       240 p~~y~f~~~~~~~~~~lgaSPE~lv~~~~~~v~T~piAGT~~Rg~~~~eD~~l~~~Ll~d~Ke~aEh~mvVD~irndL~~  319 (458)
T 3gse_A          240 HRCYHFMLRFDDRQAFLGSSPERLYLRQQLHLETEALAGTVSNLDSDPQAAVLADWLMHDEKNQRENLLVVDDICQRLQG  319 (458)
T ss_dssp             TTCEEEEEESSSSEEEEEEECCEEEEEETTEEEEEEEEEEEECCSSHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHGG
T ss_pred             CCceEEEEEcCCCcEEEEcCchheEEEECCEEEEEECCCCccCCCChHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHh
Confidence            99999999975 57899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcCCceEecceeeeeeeCceeEEEEEEEEEeCCCCCHHHHHHhcCCCCCCCCcchHHHHHHHHHhcCCCCCcceeeEEE
Q 007699          431 VARSGSVKVEKLMNVERYSHVMHISSTITGELQDRLSCWDALRAALPVGTVSGAPKVKAMELIDELEVNRRGPYSGGFGG  510 (592)
Q Consensus       431 v~~~gsV~V~~~~~v~~~~~v~HL~S~v~g~L~~~~~~~d~l~a~~P~gavtGaPK~~AmeiI~~lE~~~Rg~Y~G~vG~  510 (592)
                      +|.  +|+|+. |.|++|+|||||+|+|+|+|+++ +.+|+|+++||+|||||+||++||++|+++|+++||+|||+|||
T Consensus       320 ~~~--~v~V~~-~~v~~~~~V~HL~S~V~g~L~~~-~~~dll~al~PtgavtGaPK~~AmeiI~elE~~~RG~Y~G~vG~  395 (458)
T 3gse_A          320 GVT--AVDVMP-PEIIRLRKVQHLRRRICAQLSRA-SDTDCLQRLQPTAAVAGLPREAARQFIAKHELFSRGWYAGSAGY  395 (458)
T ss_dssp             GEE--EEEECC-CEEEECSSEEEEEEEEEEEESSC-CHHHHHHHHSSCHHHHEESHHHHHHHHHHHCCSCCTTTTSEEEE
T ss_pred             hCC--ceEECC-cEEEEeCcEEEEeeEEEEEECCC-CHHHHHHHhCCCCcCCcccHHHHHHHHHHhCCCCCceEEEEEEE
Confidence            996  799986 99999999999999999999999 99999999999999999999999999999999999999999999


Q ss_pred             EecCCceeEEEEeeeeEeecCccccccccchhhhcccCcEEEEEeceeccCCCCchHHHHHHHHHHHHHHHHHH
Q 007699          511 VSFTGDMDIALALRTMVFQTGTRYDTMYSYKDARKRREWVAYLQAGAGIVADSDPDDEHRECQNKAAGLARAID  584 (592)
Q Consensus       511 i~~~G~~d~~v~IRt~~~~~~~~~~~~~~~~~~~~~~~~~~~l~AGaGIv~dS~p~~E~~Et~~K~~~l~~al~  584 (592)
                      ++.+ ++||+|+|||+++.                  ++.++++||||||+||+|+.||+||++|+++|+++|+
T Consensus       396 i~~~-~~d~~V~IRt~~~~------------------~~~~~l~AGaGIV~dS~pe~E~~Et~~K~~~ll~al~  450 (458)
T 3gse_A          396 LSLK-RTEFSVALRSARVD------------------GQQIHLYAGAGIVAGSDAEQEWQEIDNKSAGLQSLLE  450 (458)
T ss_dssp             ECSS-EEEEEECCSEEEEE------------------TTEEEEEEEEEECTTCCHHHHHHHC------CGGGSE
T ss_pred             EECC-CCEEEEEEEEEEEE------------------CCEEEEEeeeeEcCCCChHHHHHHHHHHHHHHHHHhc
Confidence            9987 79999999999984                  4689999999999999999999999999999999874


No 12 
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=100.00  E-value=5.7e-70  Score=615.67  Aligned_cols=267  Identities=22%  Similarity=0.297  Sum_probs=244.5

Q ss_pred             CCCCCChHHHHHHHHHHH-HHHHcCCCceeeeeeEEeecCC----CCHHHHHHHHHHhCCCCe-EEEEecCCeEEEeecC
Q 007699          298 KKSNMTSEAYKNAVLEAK-EHIQAGDIFQIVLSQRFERRTF----ADPFEVYRALRVVNPSPY-MTYLQARGCILVASSP  371 (592)
Q Consensus       298 ~~~~~~~e~y~~~V~~~~-~~I~~Gdi~qvVLsrr~~~~~~----~~p~~ly~~Lr~~nPs~y-~~~~~~~~~~~vgaSP  371 (592)
                      +..++++++|.++|++++ ++|++||++||||||++.....    .||+++|++||+.||+|| +||++.++..|+||||
T Consensus       123 ~~~~~~~~~y~~~V~~~i~~~I~~Gd~~kvvLsr~~~~~~~~~~~~~~~~l~~~Lr~~~p~~y~~~~~~~~~~~~~gaSP  202 (645)
T 3r75_A          123 RHFDIDDEAYAEIVERVITDEIGTGAGSNFVIKRTLEGDLDDYSPAKALAVFKRLMRREVGAYWIFVIHTGERTFVGATP  202 (645)
T ss_dssp             EEESSCHHHHHHHHHHHHHHTGGGTSCSEEECCEEEEEECTTCCHHHHHHHHHHHHHHCCSCSEEEEEECSSEEEEEEES
T ss_pred             CcCCCCHHHHHHHHHHHHHHHHHCCCeEEEEeeeEEEEEcCCCCCCCHHHHHHHHHHHCCccceEEEEECCCCEEEEeCc
Confidence            345789999999999985 6999999999999999987654    378999999999999999 7888999999999999


Q ss_pred             ceeEEEECCEEEEEecCCCCCCCCChHHHHHHHHHHhcChhhhhhHHHHHHHHHhhccCCCcCCceEecceeeeeeeCce
Q 007699          372 EILTRVKKNKIVNRPLAGTVRRGRTTEEDEMLETQLLKDAKQCAEHVMLVDLGRNDVGKVARSGSVKVEKLMNVERYSHV  451 (592)
Q Consensus       372 E~l~~~~~~~v~t~plAGT~~rg~~~~ed~~l~~~Ll~d~Ke~aEh~mvVDl~rndL~~v~~~gsV~V~~~~~v~~~~~v  451 (592)
                      |+|+++++++++|+|||||++|+.+.++|+.+ .+|++|+||++||.||||++||||+++|.+|++.+.  +.+++++||
T Consensus       203 E~l~~~~~~~v~t~piaGT~~r~~~~~~~~~~-~~Ll~s~Ke~aEh~mvVDl~rndL~~v~~~g~~v~~--p~l~~~~~v  279 (645)
T 3r75_A          203 ERHLTLHEGCATMNPISGTYRYPQSGPTIDGI-NAFLGDRKESDELYMVLDEELKMMARICPAGGQVTG--PHLREMARL  279 (645)
T ss_dssp             CBCCEEETTEEEECCEEEEEECCTTCCCHHHH-HHHHTCHHHHHHHHHHHHHHHHHHHHHSTTCCEEEE--EEEEECSSE
T ss_pred             chheEEECCEEEEEeCCCCcCCCCCchhHHHH-HHHhhChHHHHHHHHHHHHHHHHHHhhcCCCCCccC--ceEEEECcE
Confidence            99999999999999999999999887666554 699999999999999999999999999999986432  345689999


Q ss_pred             eEEEEEEEEEeCCCCCHHHHHHhcCCCCCCCCcchHHHHHHHHHhcCCCCCcceeeEEEEecCC----ceeEEEEeeeeE
Q 007699          452 MHISSTITGELQDRLSCWDALRAALPVGTVSGAPKVKAMELIDELEVNRRGPYSGGFGGVSFTG----DMDIALALRTMV  527 (592)
Q Consensus       452 ~HL~S~v~g~L~~~~~~~d~l~a~~P~gavtGaPK~~AmeiI~~lE~~~Rg~Y~G~vG~i~~~G----~~d~~v~IRt~~  527 (592)
                      +||+|+|+|++  +.+.+|+|+++||+|||||+||++||++|+++|+.+||+|||+|||++++|    ++|++|+|||++
T Consensus       280 ~Hl~s~v~g~l--~~~~~d~l~al~P~gsvtGaPK~~A~~~I~~lE~~~Rg~Y~G~vG~i~~~g~G~~~~d~~V~IRt~~  357 (645)
T 3r75_A          280 AHTEYFIVGHT--EADVRDLLRETMFAPTVTGSPIESATRVIARHERAGRGYYSGIAALIGRDARGGRTLDSAILIRTAE  357 (645)
T ss_dssp             EEEEEEEEEEC--CCCHHHHHHHTCSCGGGSEESHHHHHHHHHHHCCSCCTTTTCEEEEEEECTTSCEEEEEEECCSEEE
T ss_pred             EEEEEEEEEEE--CCCHHHHHHHhCCCCccCCCCHHHHHHHHHHhcCCCCcceeEEEEEEecCCCCceeeeeeEEccEEE
Confidence            99999999998  468999999999999999999999999999999999999999999999988    678999999999


Q ss_pred             eecCccccccccchhhhcccCcEEEEEeceeccCCCCchHHHHHHHHHHHHHHHHHHHH
Q 007699          528 FQTGTRYDTMYSYKDARKRREWVAYLQAGAGIVADSDPDDEHRECQNKAAGLARAIDLA  586 (592)
Q Consensus       528 ~~~~~~~~~~~~~~~~~~~~~~~~~l~AGaGIv~dS~p~~E~~Et~~K~~~l~~al~~a  586 (592)
                      +.                 +++.++++||||||+||+|++||+||++|+++|++||++.
T Consensus       358 ~~-----------------~~~~~~l~aGaGIv~dS~pe~E~~Et~~K~~~~l~al~~~  399 (645)
T 3r75_A          358 ID-----------------RAGHVRIGVGSTLVRHSDAVSEVMETHAKVAALSNAFDPP  399 (645)
T ss_dssp             EE-----------------TTCEEEEEECCEECTTCCHHHHHHHHHHHHHHHHHHHSCC
T ss_pred             Ec-----------------cCCEEEEEeccEEeCCCChHHHHHHHHHHHHHHHHHhccC
Confidence            73                 3468999999999999999999999999999999999743


No 13 
>3h9m_A P-aminobenzoate synthetase, component I; para-aminobenzoate synthetase, cytophaga hutchinsonii,YP_678417.1, CHU_1808; HET: PGE; 1.57A {Cytophaga hutchinsonii atcc 33406}
Probab=94.27  E-value=2  Score=46.10  Aligned_cols=73  Identities=10%  Similarity=0.124  Sum_probs=50.2

Q ss_pred             CCHHHHHHHH-------hcCC--eEeEEEEEcCCC-CCHHHHHHHhhccCCCCCCeEEEecCCCCCcccCCCceeEEEeC
Q 007699           72 SDASGFSEAS-------KRAN--LVPLYRCIFSDH-LTPVVAYRCLVQEDDREAPSFLFESVEPGVRVSNVGRYSVVGAQ  141 (592)
Q Consensus        72 ~~~~~f~~~~-------~~~n--~~p~~~~i~~d~-lTPv~~y~~L~~~~~~~~~sfLLESa~~g~~~~~~gRYS~IG~~  141 (592)
                      ++.++|.+..       +.|.  -|-+.+++..+. .+|+.+|++|+..... ...|+|+-.          -+.++|+-
T Consensus       160 ~~~~~y~~~V~~~~~~I~~Gd~~qvvLsr~~~~~~~~dp~~~y~~Lr~~nPs-py~~~~~~~----------~~~~vgaS  228 (436)
T 3h9m_A          160 VSKESYFNAFDELQQIIAQGDAYEINYCIPFTAKGNISPAATYQRLNKKTPM-PFSVYYKFN----------TEYILSAS  228 (436)
T ss_dssp             SCHHHHHHHHHHHHHHHHTTSCSEEEEEEEEEEECCCCHHHHHHHHHHHSCC-TTEEEEEET----------TEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHHHcCCCcEEEEEEEEEecCCCCHHHHHHHHHHhCCC-ceEEEEECC----------CCEEEEEc
Confidence            4666555444       4564  345566655443 8999999999865432 336777641          37899999


Q ss_pred             CceEEEEeCCeEEE
Q 007699          142 PVMEVIVKDNNVTI  155 (592)
Q Consensus       142 P~~~i~~~~~~v~v  155 (592)
                      |..-+..+++.++.
T Consensus       229 PE~lv~~~~~~v~t  242 (436)
T 3h9m_A          229 PERFIKKTGDTIIS  242 (436)
T ss_dssp             CCEEEEEETTEEEE
T ss_pred             hHHheEEECCEEEE
Confidence            99999989988765


No 14 
>3hwo_A Isochorismate synthase ENTC; chorismate-utilizing enzymes, siderophore, enterobactin, enterobactin biosynthesis, ION T iron, iron transport; HET: ISC; 2.30A {Escherichia coli}
Probab=90.87  E-value=16  Score=38.56  Aligned_cols=75  Identities=15%  Similarity=0.172  Sum_probs=49.6

Q ss_pred             cCCHHHHHHHH-------hcCC--eEeEEEEEc---CCCCCHHHHHHHhhccCCCCCCeEEEecCCCCCcccCCCceeEE
Q 007699           71 ASDASGFSEAS-------KRAN--LVPLYRCIF---SDHLTPVVAYRCLVQEDDREAPSFLFESVEPGVRVSNVGRYSVV  138 (592)
Q Consensus        71 ~~~~~~f~~~~-------~~~n--~~p~~~~i~---~d~lTPv~~y~~L~~~~~~~~~sfLLESa~~g~~~~~~gRYS~I  138 (592)
                      .++.++|.+..       +.|+  -|-+.+++.   ....+|..+|++|+..... ...|+|+-..         -+.|+
T Consensus       126 ~~~~~~y~~~V~~~~~~I~~Gd~~kVVLsr~~~~~~~~~~d~~~l~~~Lr~~np~-~y~f~~~~~~---------~~~~v  195 (394)
T 3hwo_A          126 IPEQTTFEQMVARAAALTATPQVDKVVLSRLIDITTDAAIDSGVLLERLIAQNPV-SYNFHVPLAD---------GGVLL  195 (394)
T ss_dssp             ESCHHHHHHHHHHHHHHHHSSSCSEEEEEEEEEEEESSCCCHHHHHHHHHHHCSS-SEEEEEECSS---------SCEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHcCCCeEEEeeeEEEEecCCCCCHHHHHHHHHHhCCc-ceEEEEEcCC---------CCEEE
Confidence            35666665544       4564  344554443   2357999999999865422 3367777421         26799


Q ss_pred             EeCCceEEEEeCCeEEE
Q 007699          139 GAQPVMEVIVKDNNVTI  155 (592)
Q Consensus       139 G~~P~~~i~~~~~~v~v  155 (592)
                      |+-|..-+..+++.++.
T Consensus       196 gaSPE~lv~~~~~~v~t  212 (394)
T 3hwo_A          196 GASPELLLRKDGERFSS  212 (394)
T ss_dssp             EEECCEEEEEETTEEEE
T ss_pred             EECchheEEEeCCEEEE
Confidence            99999999999988764


No 15 
>3os6_A Isochorismate synthase DHBC; structural genomics, center for structural genomics of infec diseases, csgid, isomerase; HET: MSE 15P; 2.40A {Bacillus anthracis}
Probab=90.14  E-value=17  Score=38.60  Aligned_cols=79  Identities=16%  Similarity=0.200  Sum_probs=50.5

Q ss_pred             CCHHHHHHHH-------hcCC--eEeEEEEEcC---CCCCHHHHHHHhhccCCCCCCeEEEecCCCCCcccCCCceeEEE
Q 007699           72 SDASGFSEAS-------KRAN--LVPLYRCIFS---DHLTPVVAYRCLVQEDDREAPSFLFESVEPGVRVSNVGRYSVVG  139 (592)
Q Consensus        72 ~~~~~f~~~~-------~~~n--~~p~~~~i~~---d~lTPv~~y~~L~~~~~~~~~sfLLESa~~g~~~~~~gRYS~IG  139 (592)
                      ++.++|.+..       +.|.  -|-+.+++..   ...+|..+|++|+..... ...|+++-...+    ......|+|
T Consensus       119 ~~~~~y~~~V~~~~~~I~~Gd~~kVVLsr~~~~~~~~~~d~~~l~~~Lr~~np~-~y~f~~~~~~~~----~~~~~~~vg  193 (399)
T 3os6_A          119 PDHEVYMKGVKQGIEKIKDGDLKKIVLSRSLDVKSSGKIDKQKLLRELAEHNKH-GYTFAVNLPKDE----NENSKTLIG  193 (399)
T ss_dssp             SCHHHHHHHHHHHHHHHHTTSCSEEEEEEEEEEEESSCCCHHHHHHHHHHTCSS-SEEEEEEECCCC----C--CEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHcCCCeEEEeeeEEEEECCCCCCHHHHHHHHHHhCCC-ceEEEEECCCcc----cCCCCEEEE
Confidence            4666555443       4565  3444555432   348999999999865422 236888754321    112467999


Q ss_pred             eCCceEEEEeCCeEEE
Q 007699          140 AQPVMEVIVKDNNVTI  155 (592)
Q Consensus       140 ~~P~~~i~~~~~~v~v  155 (592)
                      +-|..-+..+++.++.
T Consensus       194 aSPE~lv~~~~~~v~t  209 (399)
T 3os6_A          194 ASPELLVSRHGMQVIS  209 (399)
T ss_dssp             EECCEEEEEETTEEEE
T ss_pred             eCcchheEEeCCEEEE
Confidence            9999989888888764


No 16 
>1qdl_A Protein (anthranilate synthase (TRPE-subunit)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: d.161.1.1
Probab=85.49  E-value=22  Score=37.87  Aligned_cols=73  Identities=18%  Similarity=0.183  Sum_probs=48.3

Q ss_pred             CCHHHHHHHH-------hcCC--eEeEEEEEcCC-CCCHHHHHHHhhccCCCCCCeEEEecCCCCCcccCCCceeEEEeC
Q 007699           72 SDASGFSEAS-------KRAN--LVPLYRCIFSD-HLTPVVAYRCLVQEDDREAPSFLFESVEPGVRVSNVGRYSVVGAQ  141 (592)
Q Consensus        72 ~~~~~f~~~~-------~~~n--~~p~~~~i~~d-~lTPv~~y~~L~~~~~~~~~sfLLESa~~g~~~~~~gRYS~IG~~  141 (592)
                      .+.++|.+..       +.|.  -|-+.+++... ..+|+.+|++|+..... ...|+|+-  +        .+.++|+-
T Consensus       156 ~~~~~y~~~V~~~~~~I~~Gd~~qvvLsr~~~~~~~~~~~~~y~~Lr~~np~-py~~~~~~--~--------~~~~~gaS  224 (422)
T 1qdl_A          156 LNKNSYERIVSESLEYIRSGYIFQVVLSRFYRYIFSGDPLRIYYNLRRINPS-PYMFYLKF--D--------EKYLIGSS  224 (422)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTSCSEEEEEEEEEEEEEECTHHHHHHHHHHSCC-SEEEEEEE--T--------TEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHcCCceEEEEeEEEEecCCCCHHHHHHHHHHhCcc-CEEEEEEC--C--------CCEEEEeC
Confidence            4556555443       4564  34455555433 36899999999865422 23677764  1        26899999


Q ss_pred             CceEEEEeCCeEEE
Q 007699          142 PVMEVIVKDNNVTI  155 (592)
Q Consensus       142 P~~~i~~~~~~v~v  155 (592)
                      |..-+..+++.++.
T Consensus       225 PE~l~~~~~~~v~t  238 (422)
T 1qdl_A          225 PELLFRVQDNIVET  238 (422)
T ss_dssp             SCEEEEEETTEEEE
T ss_pred             chheEEEECCEEEE
Confidence            99999988888764


No 17 
>1k0e_A P-aminobenzoate synthase component I; aminodeoxychorismate synthase, chorismate, glutamine, tryptophan, PABA synthase, lyase; HET: TRP; 2.00A {Escherichia coli} SCOP: d.161.1.1 PDB: 1k0g_A*
Probab=84.82  E-value=28  Score=37.45  Aligned_cols=73  Identities=11%  Similarity=0.109  Sum_probs=47.2

Q ss_pred             CCHHHHHHHH-------hcCC--eEeEEEEEcCC-CCCHHHHHHHhhccCCCCCCeEEEecCCCCCcccCCCceeEEEeC
Q 007699           72 SDASGFSEAS-------KRAN--LVPLYRCIFSD-HLTPVVAYRCLVQEDDREAPSFLFESVEPGVRVSNVGRYSVVGAQ  141 (592)
Q Consensus        72 ~~~~~f~~~~-------~~~n--~~p~~~~i~~d-~lTPv~~y~~L~~~~~~~~~sfLLESa~~g~~~~~~gRYS~IG~~  141 (592)
                      .+.++|.+..       +.|.  -|-+.+++... ..+|+.+|++|+..... ...|+|+-          +.+.++|+-
T Consensus       188 ~~~~~y~~~V~~~~~~I~~Gd~~qvvLsr~~~~~~~~~~~~~y~~Lr~~np~-py~~~~~~----------~~~~~~gaS  256 (453)
T 1k0e_A          188 MTREQYGEKFRQVQEYLHSGDCYQVNLAQRFHATYSGDEWQAFLQLNQANRA-PFSAFLRL----------EQGAILSLS  256 (453)
T ss_dssp             SCHHHHHHHHHHHHHHHHTTSCSCEEEEEEEEEEEESCHHHHHHHHHHHHCC-TEEEEEEC----------SSCEEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHcCCceEEEeeeEEEccCCCCHHHHHHHHHHhCCC-CEEEEEEC----------CCCEEEEec
Confidence            4566555443       4564  34445555432 24899999999865322 23677764          136799999


Q ss_pred             CceEEEEeCCeEEE
Q 007699          142 PVMEVIVKDNNVTI  155 (592)
Q Consensus       142 P~~~i~~~~~~v~v  155 (592)
                      |..-+..+++.++.
T Consensus       257 PE~l~~~~~~~v~t  270 (453)
T 1k0e_A          257 PERFILCDNSEIQT  270 (453)
T ss_dssp             CCBCEEEETTEEEE
T ss_pred             chheEEEECCEEEE
Confidence            99888888887764


No 18 
>4grh_A Aminodeoxychorismate synthase; helix-sheet-helix sandwich, 4-amino-4-deoxychori PABA, transferase; HET: 15P CPS; 2.25A {Stenotrophomonas maltophilia}
Probab=84.43  E-value=48  Score=35.66  Aligned_cols=73  Identities=19%  Similarity=0.225  Sum_probs=48.3

Q ss_pred             CCHHHHHHHH-------hcCC--eEeEEEEEc---CCCCCHHHHHHHhhccCCCCCCeEEEecCCCCCcccCCCceeEEE
Q 007699           72 SDASGFSEAS-------KRAN--LVPLYRCIF---SDHLTPVVAYRCLVQEDDREAPSFLFESVEPGVRVSNVGRYSVVG  139 (592)
Q Consensus        72 ~~~~~f~~~~-------~~~n--~~p~~~~i~---~d~lTPv~~y~~L~~~~~~~~~sfLLESa~~g~~~~~~gRYS~IG  139 (592)
                      .+.++|.+..       +.|.  -|-+.+++.   ...++|..+|++|+..... ...|+|+-.          .+.++|
T Consensus       189 ~~~~~y~~~V~~~~~~I~~Gd~~qvvLsr~~~~~~~~~~dp~~ly~~Lr~~nPs-py~~~~~~~----------~~~~vg  257 (457)
T 4grh_A          189 DAPQRFTDGVRRVIEYLRAGDVFQVNLSRRWNAQFAAPVSPQALYAQLRRANPA-PFAGLFSAH----------GRHVVS  257 (457)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTSCSEEEEEEEEEEECSSCCCHHHHHHHHHHHCCC-SSEEEEEET----------TEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHcCCceEEEeeeEEEEecCCCCCHHHHHHHHHHhCCC-CeEEEEECC----------CCEEEE
Confidence            4566555444       4564  445565553   2346999999999865432 236777641          278999


Q ss_pred             eCCceEEEEeCCeEEE
Q 007699          140 AQPVMEVIVKDNNVTI  155 (592)
Q Consensus       140 ~~P~~~i~~~~~~v~v  155 (592)
                      +-|..-+..+++.++.
T Consensus       258 aSPE~lv~~~~~~v~t  273 (457)
T 4grh_A          258 SSPERLVSVHAGHAQT  273 (457)
T ss_dssp             SSCEEEEEEETTEEEC
T ss_pred             EChhhhEEEECCEEEE
Confidence            9999888888877753


No 19 
>3bzm_A Menaquinone-specific isochorismate synthase; isomerase, menaquinone biosynthesis; HET: CIT; 1.95A {Escherichia coli} SCOP: d.161.1.1 PDB: 2eua_A* 3bzn_A
Probab=74.04  E-value=96  Score=32.98  Aligned_cols=74  Identities=15%  Similarity=0.188  Sum_probs=48.3

Q ss_pred             CCHHHHHHHH-------hcCCe--EeEEEEEc---CCCCCHHHHHHHhhccCCCCCCeEEEecCCCCCcccCCCceeEEE
Q 007699           72 SDASGFSEAS-------KRANL--VPLYRCIF---SDHLTPVVAYRCLVQEDDREAPSFLFESVEPGVRVSNVGRYSVVG  139 (592)
Q Consensus        72 ~~~~~f~~~~-------~~~n~--~p~~~~i~---~d~lTPv~~y~~L~~~~~~~~~sfLLESa~~g~~~~~~gRYS~IG  139 (592)
                      .+.++|.+..       +.|.+  |-+.+++.   ....+|..+|++|+.... ....|+|+-.         +...|||
T Consensus       167 ~~~~~y~~~V~~~~~~I~~G~~~kvvLsr~~~~~~~~~~~~~~~~~~lr~~np-~~y~~~~~~~---------~~~~~~g  236 (431)
T 3bzm_A          167 PDKTGWTQLIELATKTIAEGELDKVVLARATDLHFASPVNAAAMMAASRRLNL-NCYHFYMAFD---------GENAFLG  236 (431)
T ss_dssp             SCHHHHHHHHHHHHHHHHHSSCCEEEEEEEEEEEESSCCCHHHHHHHHHHHSC-SSEEEEEECS---------SSEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHcCCceEEEeccEEEEecCCCCCHHHHHHHhhHhCC-CceEEEEEcC---------CCCEEEE
Confidence            4666655444       45643  44555442   346899999999986532 2236777642         1367999


Q ss_pred             eCCceEEEEeCCeEEE
Q 007699          140 AQPVMEVIVKDNNVTI  155 (592)
Q Consensus       140 ~~P~~~i~~~~~~v~v  155 (592)
                      +-|..-+..+++.++.
T Consensus       237 aSPE~l~~~~~~~v~t  252 (431)
T 3bzm_A          237 SSPERLWRRRDKALRT  252 (431)
T ss_dssp             EECCEEEEEETTEEEE
T ss_pred             cCccceEEEeCCEEEE
Confidence            9999988888887764


No 20 
>3log_A Isochorismate synthase/isochorismate-pyruvate LYA; salicylate, anthranilate, isochor synthase, isochorismate lyase, ION transport; 1.73A {Mycobacterium tuberculosis} SCOP: d.161.1.1 PDB: 3veh_A* 3st6_A* 3rv8_A* 2i6y_A 2g5f_A 3rv6_A* 3rv7_A* 3rv9_A*
Probab=48.34  E-value=2.8e+02  Score=29.62  Aligned_cols=69  Identities=22%  Similarity=0.280  Sum_probs=45.1

Q ss_pred             HHHHHHhcCC--eEeEEEEEcCC-CCCHHHHHHHhhccCCCCCCeEEEecCCCCCcccCCCceeEEEeCCceEEEEe-CC
Q 007699           76 GFSEASKRAN--LVPLYRCIFSD-HLTPVVAYRCLVQEDDREAPSFLFESVEPGVRVSNVGRYSVVGAQPVMEVIVK-DN  151 (592)
Q Consensus        76 ~f~~~~~~~n--~~p~~~~i~~d-~lTPv~~y~~L~~~~~~~~~sfLLESa~~g~~~~~~gRYS~IG~~P~~~i~~~-~~  151 (592)
                      +.++..+.|.  -|-+.+++... ..+|..+|+.|+... .....|+|.-          +-+.++|+-|..-+..+ ++
T Consensus       195 ~a~~~I~~Gd~~kVVLsr~~~~~~~~d~~~~y~~lr~~n-p~py~f~~~~----------~~~~~vGaSPE~lv~~~~~~  263 (451)
T 3log_A          195 VAVDEIAAGRYHKVILSRCVEVPFAIDFPLTYRLGRRHN-TPVRSFLLQL----------GGIRALGYSPELVTAVRADG  263 (451)
T ss_dssp             HHHHHHHTTSCSEEEEEEEEECSSCBCHHHHHHHHHTTC-CCSEEEEEEE----------TTEEEEEEECSEEEEECTTS
T ss_pred             HHHHHHHcCCceEEEeeeEEeccCCCCHHHHHHHHHhhC-CCCeEEEEEc----------CCCceeccCccceEEEecCC
Confidence            4444445674  45566666443 368999999998543 2233677753          12679999999888887 66


Q ss_pred             eEEE
Q 007699          152 NVTI  155 (592)
Q Consensus       152 ~v~v  155 (592)
                      .++.
T Consensus       264 ~v~t  267 (451)
T 3log_A          264 VVIT  267 (451)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            6653


No 21 
>1i1q_A Anthranilate synthase component I; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: d.161.1.1 PDB: 1i7q_A 1i7s_A*
Probab=26.64  E-value=1.6e+02  Score=32.02  Aligned_cols=52  Identities=8%  Similarity=0.073  Sum_probs=41.5

Q ss_pred             eecCCCCHHHHHHHHHHhCCCCeEEEEec-------CCeEEEeecCceeEEEECCEEEEEe
Q 007699          333 ERRTFADPFEVYRALRVVNPSPYMTYLQA-------RGCILVASSPEILTRVKKNKIVNRP  386 (592)
Q Consensus       333 ~~~~~~~p~~ly~~Lr~~nPs~y~~~~~~-------~~~~~vgaSPE~l~~~~~~~v~t~p  386 (592)
                      ..+...+|..+|.+|+..  .|+.|+|+.       +.+.|+|+.|-.-++.+++.+....
T Consensus        14 ~l~~~~~p~~~~~~l~~~--~~~~~LLES~~~~~~~~RyS~ig~~p~~~i~~~~~~~~i~~   72 (520)
T 1i1q_A           14 DAAYRENPTALFHQVCGD--RPATLLLESADIDSKDDLKSLLLVDSALRITALGDTVTIQA   72 (520)
T ss_dssp             EECCCSCHHHHHHHHHTT--CSSEEEEECCCGGGCSSCEEEEEEEEEEEEEEETTEEEEEE
T ss_pred             ECCCCCCHHHHHHHHhcC--CCCEEEEECCCCCCCCCCeEEEEECCceEEEEECCEEEEEe
Confidence            345668999999999764  467888873       4578999999999999999987653


No 22 
>2fn0_A Salicylate synthetase, IRP9; salicylate synthase, siderophore, transcription; 1.85A {Yersinia enterocolitica} SCOP: d.161.1.1 PDB: 2fn1_A*
Probab=21.90  E-value=1.3e+02  Score=32.10  Aligned_cols=45  Identities=2%  Similarity=-0.071  Sum_probs=36.3

Q ss_pred             CCCHHHHHHHHHHhCCCCeEEEEecCCeEEEeecCceeEEEECCE
Q 007699          337 FADPFEVYRALRVVNPSPYMTYLQARGCILVASSPEILTRVKKNK  381 (592)
Q Consensus       337 ~~~p~~ly~~Lr~~nPs~y~~~~~~~~~~~vgaSPE~l~~~~~~~  381 (592)
                      ..+|+.+|.+|+...+.++.|+++.++..++|.-|-.-++.+++.
T Consensus        16 ~~tPl~~~~~l~~~~~~~~~~l~es~~~~~ig~g~~~~l~~~~~~   60 (437)
T 2fn0_A           16 EEQWLPTISGVLRQFAEEECYVYERPPCWYLGKGCQARLHINADG   60 (437)
T ss_dssp             CTTHHHHHHHHHHHTTTSCEEEEEETTEEEEEESCSEEEEECTTS
T ss_pred             CCCHHHHHHHHhcCCCCCcEEEEEcCCCEEEEECCcEEEEEeCCE
Confidence            459999999998776556677777777788999999988887753


Done!