BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007700
(592 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O96005|CLPT1_HUMAN Cleft lip and palate transmembrane protein 1 OS=Homo sapiens
GN=CLPTM1 PE=1 SV=1
Length = 669
Score = 478 bits (1230), Expect = e-134, Method: Compositional matrix adjust.
Identities = 258/603 (42%), Positives = 364/603 (60%), Gaps = 54/603 (8%)
Query: 9 AAGGGGGGQQQRQQQAG------------------GLGQTITGVI-RIAVFWYFASKFF- 48
AAGGG GQ G Q I GV+ RI + W +S F
Sbjct: 16 AAGGGSSGQVTSNGSIGRDPPAETQPQNPPAQPAPNAWQVIKGVLFRIFIIWAISSWFRR 75
Query: 49 --APKRPAGPESAQLMS--NLFQRGEYLDMWLYVSEHEKFNDFGNEGALIWHETNMPYAV 104
AP+ AGP A ++ NLF + +++ +Y+SEHE F DF AL W + ++ Y
Sbjct: 76 GPAPQDQAGPGGAPRVASRNLFPKDTLMNLHVYISEHEHFTDFNATSALFWEQHDLVYGD 135
Query: 105 WSRESTRTLSLKYYPT----EALKNNGSLYVHVFFARSGYPPDPNDPE-YQPLAVFGKTH 159
W+ +++ ++++ NGS+Y+HV+F +SG+ PDP Y+ LA +
Sbjct: 136 WTSGENSDGCYEHFAELDIPQSVQQNGSIYIHVYFTKSGFHPDPRQKALYRRLATVHMSR 195
Query: 160 SIVVYYPKSKADKRRSLLRNPKDSEEAQPLVQAVDDPQ--GDSEDDGPVEWISFWKPNIT 217
++ Y + + K ++LL ++ DP+ +ED GPVE IS W PNIT
Sbjct: 196 -MINKYKRRRFQKTKNLLTGETEA-----------DPEMIKRAEDYGPVEVISHWHPNIT 243
Query: 218 INLVDDFTRYPSNAAPPNIAPYLNVEPTTGNYFPTIFFNEFWLLRDKLIPINETVTELPL 277
IN+VDD T + + PP + Y+ + +G+Y+P I+FN++W L+ PINE++ LPL
Sbjct: 244 INIVDDHTPWVKGSVPPPLDQYVKFDAVSGDYYPIIYFNDYWNLQKDYYPINESLASLPL 303
Query: 278 NLEVGPISMTKWQLFLQIDQSFQIHRSY-GSMLEGEADE----LKRVFLEGNPYLLVITM 332
+ P+S+ +WQL+ QS + ++ G L ++DE +K LE NPYLL +T+
Sbjct: 304 RVSFCPLSLWRWQLYAA--QSTKSPWNFLGDELYEQSDEEQDSVKVALLETNPYLLALTI 361
Query: 333 VVSLLHSVFDFLAFKNDIQFWNKNKSMEGLSAKSVVVNFICQLIVFLYLLDNDTSWMILA 392
+VS++HSVF+FLAFKNDIQFWN +S+EGLS +SV +V LY+LDN+T++++
Sbjct: 362 IVSIVHSVFEFLAFKNDIQFWNSRQSLEGLSVRSVFFGVFQSFVVLLYILDNETNFVVQV 421
Query: 393 SSGVGCCIEFWKIGKAMHIEIDR----SGTIPMLRFRDRESYAGNKTKEYDDIAMKYLSG 448
S +G I+ WKI K M + +DR +G P L F+D+ +Y + TK YDD+A +YLS
Sbjct: 422 SVFIGVLIDLWKITKVMDVRLDREHRVAGIFPRLSFKDKSTYIESSTKVYDDMAFRYLSW 481
Query: 449 VLFFLAICSSIYSLMYERHKSWYSWILSSLTSCVYMFGFTMMCPQLFINYKLKSVAHLPW 508
+LF L C ++YSL+Y HK WYSW+LS L + FGF M PQLFINYKLKSVAHLPW
Sbjct: 482 ILFPLLGCYAVYSLLYLEHKGWYSWVLSMLYGFLLTFGFITMTPQLFINYKLKSVAHLPW 541
Query: 509 RQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFA 568
R +TYK LNT IDDLFAFVIKMP ++R+ RDD+VF IYLYQRWIY+VD TRVNEFG +
Sbjct: 542 RMLTYKALNTFIDDLFAFVIKMPVMYRIGCLRDDVVFFIYLYQRWIYRVDPTRVNEFGMS 601
Query: 569 GED 571
GED
Sbjct: 602 GED 604
>sp|Q2NL17|CLPT1_BOVIN Cleft lip and palate transmembrane protein 1 homolog OS=Bos taurus
GN=CLPTM1 PE=2 SV=1
Length = 670
Score = 474 bits (1219), Expect = e-132, Method: Compositional matrix adjust.
Identities = 255/605 (42%), Positives = 361/605 (59%), Gaps = 60/605 (9%)
Query: 9 AAGGGGGGQQQRQQQAG------------------GLGQTITGVI-RIAVFWYFASKFF- 48
AAGGG GQ G Q I GV+ RI + W +S F
Sbjct: 16 AAGGGSSGQVTSNGSVGRDPPAETQPQNPPPQPAPNAWQVIKGVLFRIFIIWAISSWFRR 75
Query: 49 --APKRPAGPESAQLMS--NLFQRGEYLDMWLYVSEHEKFNDFGNEGALIWHETNMPYAV 104
AP+ AGP A ++ NLF + +++ +Y+SEHE F DF AL W + ++ Y
Sbjct: 76 GPAPQDQAGPGGAPRVASRNLFPKDTLMNLHVYISEHEHFTDFNATSALFWEQQDLVYGD 135
Query: 105 WSRESTRTLSLKYYPT----EALKNNGSLYVHVFFARSGYPPDPNDPE-YQPLAVFGKTH 159
W+ +++ ++++ NGS+Y+HV+F +SG+ PDP Y+ LA +
Sbjct: 136 WTSGENSDGCYEHFAELDIPQSVQQNGSIYIHVYFTKSGFHPDPRQKALYRRLATVHMSR 195
Query: 160 SIVVYYPKSKADKRRSLLRNPKDSEEAQPLVQAVDDPQ--GDSEDDGPVEWISFWKPNIT 217
++ Y + + K ++LL ++ DP+ +ED GPVE IS W PNIT
Sbjct: 196 -MINKYKRRRFQKTKNLLTGETEA-----------DPEMIKRAEDYGPVEVISHWHPNIT 243
Query: 218 INLVDDFTRYPSNAAPPNIAPYLNVEPTTGNYFPTIFFNEFWLLRDKLIPINETVTELPL 277
IN+VDD T + + PP + Y+ + +G+Y+P I+FN++W L+ PINE++ LPL
Sbjct: 244 INIVDDHTPWVKGSVPPPLDQYVKFDAVSGDYYPIIYFNDYWNLQKDYYPINESLASLPL 303
Query: 278 NLEVGPISMTKWQLFLQIDQSFQIHRSYGSML--------EGEADELKRVFLEGNPYLLV 329
+ P+S+ +WQL+ + Q +S + L + E D +K LE NPYLL
Sbjct: 304 RVSFCPLSLWRWQLY-----AAQSAKSPWNFLGDELYEQSDEEQDSVKVALLETNPYLLA 358
Query: 330 ITMVVSLLHSVFDFLAFKNDIQFWNKNKSMEGLSAKSVVVNFICQLIVFLYLLDNDTSWM 389
+T++VS++HSVF+FLAFKNDIQFWN +S+EGLS +SV +V LY+LDN+T+++
Sbjct: 359 LTIIVSIVHSVFEFLAFKNDIQFWNSRQSLEGLSVRSVFFGVFQSFVVLLYILDNETNFV 418
Query: 390 ILASSGVGCCIEFWKIGKAMHIEIDR----SGTIPMLRFRDRESYAGNKTKEYDDIAMKY 445
+ S +G I+ WKI K M + +DR +G +P F+D+ +Y + TK YDD+A +Y
Sbjct: 419 VQVSVFIGVLIDLWKITKVMDVRLDREHKVAGLLPRPTFQDKSTYVESSTKVYDDMAFRY 478
Query: 446 LSGVLFFLAICSSIYSLMYERHKSWYSWILSSLTSCVYMFGFTMMCPQLFINYKLKSVAH 505
LS +LF L C ++YSL+Y HK WYSW+LS L + FGF M PQLFINYKLKSVAH
Sbjct: 479 LSWILFPLLGCYAVYSLLYLEHKGWYSWVLSMLYGFLLTFGFITMTPQLFINYKLKSVAH 538
Query: 506 LPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTRVNEF 565
LPWR +TYK LNT IDDLFAFVIKMP ++R+ RDD+VF IYLYQRWIY+VD TRVNEF
Sbjct: 539 LPWRMLTYKALNTFIDDLFAFVIKMPVMYRIGCLRDDVVFFIYLYQRWIYRVDPTRVNEF 598
Query: 566 GFAGE 570
G +GE
Sbjct: 599 GMSGE 603
>sp|Q8VBZ3|CLPT1_MOUSE Cleft lip and palate transmembrane protein 1 homolog OS=Mus
musculus GN=Clptm1 PE=1 SV=1
Length = 664
Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust.
Identities = 254/603 (42%), Positives = 363/603 (60%), Gaps = 54/603 (8%)
Query: 9 AAGGGGGGQQQRQQQAG------------------GLGQTITGVI-RIAVFWYFASKFF- 48
AAGGG GQ G Q I GV+ RI + W +S F
Sbjct: 16 AAGGGSSGQVTSNGSIGRDTPAETQPQNPPPQPAPNAWQVIKGVLFRIFIIWAISSWFRR 75
Query: 49 --APKRPAGPESAQLMS--NLFQRGEYLDMWLYVSEHEKFNDFGNEGALIWHETNMPYAV 104
+P+ +GP A ++ NLF + +++ +Y+SEHE F DF AL W + ++ Y
Sbjct: 76 GPSPQDQSGPGGAPRVASRNLFPKDTLMNLHVYISEHEHFTDFNATSALFWEQHDLVYGD 135
Query: 105 WSRESTRTLSLKYYPT----EALKNNGSLYVHVFFARSGYPPDPNDPE-YQPLAVFGKTH 159
W+ +++ ++++ NGS+Y+HV+F +SG+ PDP Y+ LA +
Sbjct: 136 WTSGENSDGCYEHFAELDIPQSVQQNGSIYIHVYFTKSGFHPDPRQKALYRRLATVHMSR 195
Query: 160 SIVVYYPKSKADKRRSLLRNPKDSEEAQPLVQAVDDPQ--GDSEDDGPVEWISFWKPNIT 217
++ Y + + K ++LL ++ DP+ +ED GPVE IS W PNIT
Sbjct: 196 -MINKYKRRRFQKTKNLLTGETEA-----------DPEMIKRAEDYGPVEVISHWHPNIT 243
Query: 218 INLVDDFTRYPSNAAPPNIAPYLNVEPTTGNYFPTIFFNEFWLLRDKLIPINETVTELPL 277
IN+VDD T + + PP + Y+ + +G+Y+P I+FN++W L+ PINE++ LPL
Sbjct: 244 INIVDDHTPWVKGSVPPPLDQYVKFDAVSGDYYPIIYFNDYWNLQKDYYPINESLASLPL 303
Query: 278 NLEVGPISMTKWQLFLQIDQSFQIHRSY-GSMLEGEADE----LKRVFLEGNPYLLVITM 332
+ P+S+ +WQL+ QS + ++ G L ++DE +K LE +PYLL +T+
Sbjct: 304 RVSFCPLSLWRWQLYAA--QSTKSPWNFLGDELYEQSDEEQDSVKVALLETSPYLLALTI 361
Query: 333 VVSLLHSVFDFLAFKNDIQFWNKNKSMEGLSAKSVVVNFICQLIVFLYLLDNDTSWMILA 392
+VS++HSVF+FLAFKNDIQFWN +S+EGLS +SV +V LY+LDN+T++++
Sbjct: 362 IVSIVHSVFEFLAFKNDIQFWNSRQSLEGLSVRSVFFGVFQSFVVLLYILDNETNFVVQV 421
Query: 393 SSGVGCCIEFWKIGKAMHIEIDR----SGTIPMLRFRDRESYAGNKTKEYDDIAMKYLSG 448
S +G I+ WKI K M + +DR +G P F+D+ +Y + TK YDD+A +YLS
Sbjct: 422 SVFIGVLIDLWKITKVMDVRLDREHRVAGIFPCPTFKDKSTYIESSTKVYDDMAFRYLSW 481
Query: 449 VLFFLAICSSIYSLMYERHKSWYSWILSSLTSCVYMFGFTMMCPQLFINYKLKSVAHLPW 508
+LF L C ++YSL+Y HK WYSW+LS L + FGF M PQLFINYKLKSVAHLPW
Sbjct: 482 ILFPLLGCYAVYSLLYLEHKGWYSWVLSMLYGFLLTFGFITMTPQLFINYKLKSVAHLPW 541
Query: 509 RQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFA 568
R +TYK LNT IDDLFAFVIKMP ++R+ RDD+VF IYLYQRWIY+VD TRVNEFG +
Sbjct: 542 RMLTYKALNTFIDDLFAFVIKMPVMYRIGCLRDDVVFFIYLYQRWIYRVDPTRVNEFGMS 601
Query: 569 GED 571
GED
Sbjct: 602 GED 604
>sp|Q6DEL2|CLPT1_DANRE Cleft lip and palate transmembrane protein 1 homolog OS=Danio rerio
GN=clptm1 PE=2 SV=1
Length = 631
Score = 467 bits (1201), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/569 (43%), Positives = 354/569 (62%), Gaps = 44/569 (7%)
Query: 29 QTITGVI-RIAVFWYFASKFFA------PKRPAGPESAQLMSNLFQRGEYLDMWLYVSEH 81
Q I GV+ RI + W +S F P PAG NLF + +D+++Y+S+
Sbjct: 52 QVIKGVLFRIFIIWAISSWFRRGPSTPDPNTPAGAPRVP-SRNLFPKDTLMDLYVYISQS 110
Query: 82 EKFNDFGNEGALIWHETNMPYAVWSRESTRTLSLKYYP----TEALKNNGSLYVHVFFAR 137
E F DF N L W++ ++ Y W+ + +YY +E++K NGS+Y+H++F +
Sbjct: 111 EIFTDFNNTEELFWYQQDLVYGEWTTGDSGDGCYEYYKELDLSESVKQNGSIYMHIYFTK 170
Query: 138 SGYPPDPNDP-EYQPLAVFGKTHSIVVYYPKSKADKRRSLLRNPKDSEEAQPLVQAVDDP 196
SG+ PDP +Y+ L+ T ++ Y + K K ++LL ++ DP
Sbjct: 171 SGFHPDPKRKGQYRRLSTVHATR-MLNKYKRRKFLKTKNLLTGETEA-----------DP 218
Query: 197 Q--GDSEDDGPVEWISFWKPNITINLVDDFTRYPSNAAPPNIAPYLNVEPTTGNYFPTIF 254
+ +E GPVE IS W PN+TIN+VDD T + + PP + ++ + +G+Y+P ++
Sbjct: 219 EMIKRAESHGPVEIISHWHPNLTINMVDDHTAWVKGSVPPPLDQHVKFDAVSGDYYPIVY 278
Query: 255 FNEFWLLRDKLIPINETVTELPLNLEVGPISMTKWQLFLQIDQSFQIHRSYGSML----- 309
FN++W L+ PIN+T+ LPL L P+S+ +WQL+ + Q RS + L
Sbjct: 279 FNDYWNLQKDYYPINDTLLNLPLRLTYCPLSLWRWQLY-----AAQSARSPWNFLGEDTY 333
Query: 310 ---EGEADELKRVFLEGNPYLLVITMVVSLLHSVFDFLAFKNDIQFWNKNKSMEGLSAKS 366
+ + D +K LE NPYLL +T+VVS++HS+F+FLAFKNDIQFWN +S+EGLS +S
Sbjct: 334 EQSDEDQDSVKVALLETNPYLLGLTIVVSIVHSIFEFLAFKNDIQFWNSRQSLEGLSVRS 393
Query: 367 VVVNFICQLIVFLYLLDNDTSWMILASSGVGCCIEFWKIGKAMHIEIDR----SGTIPML 422
++ L+V LY+LDN+T++++ S +G I+FWKI K M + +DR +G +P L
Sbjct: 394 IIFGVFQSLVVLLYILDNETNFVVQVSVFIGLLIDFWKITKVMDVRLDRENRIAGIVPRL 453
Query: 423 RFRDRESYAGNKTKEYDDIAMKYLSGVLFFLAICSSIYSLMYERHKSWYSWILSSLTSCV 482
F+D+ +Y + TK YDD+A KYLS +L+ L C ++YSL+Y HK WYSW+LS L +
Sbjct: 454 VFKDKSTYVESSTKIYDDMAFKYLSWLLYPLFGCYAVYSLLYVEHKGWYSWVLSMLYGFL 513
Query: 483 YMFGFTMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDD 542
FGF M PQLFINYK+KSVAHLPWR +TYK LNT IDDLFAFVIKMP ++R+ RDD
Sbjct: 514 LTFGFITMTPQLFINYKMKSVAHLPWRMLTYKALNTFIDDLFAFVIKMPMMYRIGCLRDD 573
Query: 543 LVFLIYLYQRWIYKVDKTRVNEFGFAGED 571
+VF IYLYQRWIY+VD RVNEFG +G D
Sbjct: 574 VVFFIYLYQRWIYRVDPNRVNEFGTSGVD 602
>sp|Q54RJ1|CNRB_DICDI CLPTM1-like membrane protein cnrB OS=Dictyostelium discoideum
GN=cnrB PE=3 SV=1
Length = 619
Score = 441 bits (1135), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/516 (45%), Positives = 323/516 (62%), Gaps = 40/516 (7%)
Query: 56 PESAQLMSNLFQRGEYLDMWLYVS-EHEKFNDFGNEGALIWHETNMPYAVWSRESTRTLS 114
P ++ ++N + G +M +Y+S +E D+ L+W + + Y + T +
Sbjct: 76 PSNSVRLANSWPEGIEFNMKVYLSTSNETVGDW-----LVWEQDKLSYDWKDSNTIPTKN 130
Query: 115 LKYYPTEALKNNGSLYVHVFFARSGYPPDPNDPEYQPLAVFGKTHSIVVYYPKSKADKRR 174
+ + T L+NNGSL+ H+ +R Y QP + K H ++VY PK K +
Sbjct: 131 ITFDTTPYLQNNGSLFAHIITSRRAYLN-------QPKSQLHKVHPLIVYLPKPKPKGKN 183
Query: 175 SLLRNPKDSEEAQPLVQAVDDPQGDSEDDGPVEWISFWKPNITINLVDDFTRYPSNAAPP 234
L KD E + P E IS+WKP ++++L+ D T YP ++ P
Sbjct: 184 LLEEKSKDEPEVE---------------YDPTELISYWKPTLSLHLIVDHTIYPPDSIPK 228
Query: 235 NIAPYLNVEPTTGNYFPTIFFNEFWLLRDKLIPINETVTELPLNLEVGPISMTKWQLFLQ 294
I Y N+ T G Y P I+ NEFWL R+ L P+NETV +L + + + + KWQL +Q
Sbjct: 229 EIVSYFNI--TNGFYSPIIYCNEFWLYREHLKPVNETVKQLSIEINYSSMGLFKWQLQIQ 286
Query: 295 IDQSFQIHRSYGSML------EGEADELKRVFLEGNPYLLVITMVVSLLHSVFDFLAFKN 348
+ +S + S+G DE KR+ + +P++L +T++VS+LH++F+FLAFKN
Sbjct: 287 MQKSLDMQESFGGGGNSAMGGASVGDEFKRMLTDNDPWILGLTLIVSVLHTIFEFLAFKN 346
Query: 349 DIQFWNKNKSMEGLSAKSVVVNFICQLIVFLYLLDNDTSWMILASSGVGCCIEFWKIGKA 408
DIQFW NKSMEGLS K++ +N +C I+FLYLLDN+TS+MILASSG G +EFWK+GKA
Sbjct: 347 DIQFWKNNKSMEGLSVKTITLNCVCMGIIFLYLLDNETSYMILASSGFGFLVEFWKLGKA 406
Query: 409 MHIEIDRSGTIPM---LRFRDRESYAGNKTKEYDDIAMKYLSGVLFFLAICSSIYSLMYE 465
M I+I ++P+ + F +++ Y KTK+YDD+AMKYLS +LF L I +SIYSL Y
Sbjct: 407 MTIKITWMTSLPLPKRIEFINKDEYMS-KTKQYDDMAMKYLSWLLFPLVIGTSIYSLYYH 465
Query: 466 RHKSWYSWILSSLTSCVYMFGFTMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFA 525
HKSWYSW++SSL VY F F MM PQLFINYKLKSV+HLPWR Y+ LNT IDDLFA
Sbjct: 466 EHKSWYSWVVSSLVRTVYTFEFIMMTPQLFINYKLKSVSHLPWRVFMYRALNTFIDDLFA 525
Query: 526 FVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTR 561
F+IKMP LHRLS RDD++F++YLYQRWIY VDK R
Sbjct: 526 FIIKMPLLHRLSCLRDDIIFIVYLYQRWIYPVDKKR 561
>sp|Q8BXA5|CLP1L_MOUSE Cleft lip and palate transmembrane protein 1-like protein OS=Mus
musculus GN=Clptm1l PE=2 SV=1
Length = 539
Score = 336 bits (862), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 181/456 (39%), Positives = 276/456 (60%), Gaps = 32/456 (7%)
Query: 124 KNNGSLYVHVFFARSGYPPDPNDPEYQPLAVFG-----KTHSIVVYYPKSKADKRRSLLR 178
+NNG+LY ++F +G P + + ++ K I + +S ++ +
Sbjct: 99 RNNGTLYAYIFLHHAGILPWQDGKQVHVVSTLTTYMIPKPEEINLLTGESATQQQIEAEK 158
Query: 179 NPKDSEEAQPLVQAVDDPQGDSEDDGPVEWISFWKPNITIN-LVDDFTRYPSNAAPPNIA 237
P + A+D+P +S W+P +T+N +VDDF + ++ P ++
Sbjct: 159 KPSN---------ALDEP------------VSHWRPRLTLNVMVDDFV-FDGSSLPADVH 196
Query: 238 PYLNVEP--TTGNYFPTIFFNEFWLLRDKLIPINETVTELPLNLEVGPISMTKWQLFLQI 295
Y+ + T +Y P +F ++ L+ IN + TELPL + IS+ + + ++ +
Sbjct: 197 RYMKMIQLGKTVHYLPILFIDQLSNRVKDLMVINRSTTELPLTVSYDKISLGRLRFWIHM 256
Query: 296 DQSFQIHRSYGSMLEGEADELKRVFLEGNPYLLVITMVVSLLHSVFDFLAFKNDIQFWNK 355
+ + +G E +ADELK +F++ N YLL +T V+ H +FDFLAFK+DI FW K
Sbjct: 257 QDAVYSLQQFG-FSEKDADELKGIFVDTNLYLLALTFFVAAFHLLFDFLAFKSDISFWKK 315
Query: 356 NKSMEGLSAKSVVVNFICQLIVFLYLLDNDTSWMILASSGVGCCIEFWKIGKAMHIEIDR 415
KSM G+S K+V+ +++FL+LLD TS ++L +GVG IE WK+ KA+ I +
Sbjct: 316 KKSMIGMSTKAVLWRCFSTVVIFLFLLDEQTSLLVLIPAGVGAAIELWKVKKALKITVAW 375
Query: 416 SGTIPMLRFRDRESYAGNKTKEYDDIAMKYLSGVLFFLAICSSIYSLMYERHKSWYSWIL 475
G P+ +F S + KT++YD AMKYLS +L+ L + ++YSL+ ++KSWYSW++
Sbjct: 376 RGLRPVFQF-GTHSESERKTEKYDAQAMKYLSYLLYPLCVGGAVYSLLNIKYKSWYSWLI 434
Query: 476 SSLTSCVYMFGFTMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHR 535
+S + VY FGF M PQLF+NYK+KSVAHLPW+ TYK NT IDD+FAF+I MPT HR
Sbjct: 435 NSFVNGVYAFGFLFMLPQLFVNYKMKSVAHLPWKAFTYKAFNTFIDDVFAFIITMPTSHR 494
Query: 536 LSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGED 571
L+ FRDD+VFL+YLYQRW+Y VDK+RVNEFG + E+
Sbjct: 495 LACFRDDVVFLVYLYQRWLYPVDKSRVNEFGESYEE 530
>sp|Q96KA5|CLP1L_HUMAN Cleft lip and palate transmembrane protein 1-like protein OS=Homo
sapiens GN=CLPTM1L PE=1 SV=1
Length = 538
Score = 335 bits (860), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 186/463 (40%), Positives = 278/463 (60%), Gaps = 28/463 (6%)
Query: 124 KNNGSLYVHVFFARSGYPPDPNDPEYQ---PLAVFGKTHSIVVYYPKSKADKRRSLLRNP 180
+NNG+LY ++F +G P + + PL + PK + +LL
Sbjct: 99 RNNGTLYAYIFLHHAGVLPWHDGKQVHLVSPLTTY--------MVPKPE---EINLLTGE 147
Query: 181 KDSEEAQPLVQAVDDPQGDSEDDGPVEWISFWKPNITINLVDDFTRYPSNAAPPNIAPYL 240
D+++ ++A P S D PV S W+P + +N++ D + ++ P ++ Y+
Sbjct: 148 SDTQQ----IEAEKKPT--SALDEPV---SHWRPRLALNVMADNFVFDGSSLPADVHRYM 198
Query: 241 NVEP--TTGNYFPTIFFNEFWLLRDKLIPINETVTELPLNLEVGPISMTKWQLFLQIDQS 298
+ T +Y P +F ++ L+ IN + TELPL + +S+ + + ++ + +
Sbjct: 199 KMIQLGKTVHYLPILFIDQLSNRVKDLMVINRSTTELPLTVSYDKVSLGRLRFWIHMQDA 258
Query: 299 FQIHRSYGSMLEGEADELKRVFLEGNPYLLVITMVVSLLHSVFDFLAFKNDIQFWNKNKS 358
+ +G E +ADE+K +F++ N Y L +T V+ H +FDFLAFKNDI FW K KS
Sbjct: 259 VYSLQQFG-FSEKDADEVKGIFVDTNLYFLALTFFVAAFHLLFDFLAFKNDISFWKKKKS 317
Query: 359 MEGLSAKSVVVNFICQLIVFLYLLDNDTSWMILASSGVGCCIEFWKIGKAMHIEIDRSGT 418
M G+S K+V+ +++FL+LLD TS ++L +GVG IE WK+ KA+ + I G
Sbjct: 318 MIGMSTKAVLWRCFSTVVIFLFLLDEQTSLLVLVPAGVGAAIELWKVKKALKMTIFWRGL 377
Query: 419 IPMLRFRDRESYAGNKTKEYDDIAMKYLSGVLFFLAICSSIYSLMYERHKSWYSWILSSL 478
+P +F S + KT+EYD AMKYLS +L+ L + ++YSL+ ++KSWYSW+++S
Sbjct: 378 MPEFQF-GTYSESERKTEEYDTQAMKYLSYLLYPLCVGGAVYSLLNIKYKSWYSWLINSF 436
Query: 479 TSCVYMFGFTMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSV 538
+ VY FGF M PQLF+NYKLKSVAHLPW+ TYK NT IDD+FAF+I MPT HRL+
Sbjct: 437 VNGVYAFGFLFMLPQLFVNYKLKSVAHLPWKAFTYKAFNTFIDDVFAFIITMPTSHRLAC 496
Query: 539 FRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGEDDKVSDGTETD 581
FRDD+VFL+YLYQRW+Y VDK RVNEFG + E +K + TD
Sbjct: 497 FRDDVVFLVYLYQRWLYPVDKRRVNEFGESYE-EKATRAPHTD 538
>sp|Q6DHU1|CLP1L_DANRE Cleft lip and palate transmembrane protein 1-like protein OS=Danio
rerio GN=clptm1l PE=2 SV=1
Length = 538
Score = 335 bits (860), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 183/450 (40%), Positives = 270/450 (60%), Gaps = 20/450 (4%)
Query: 124 KNNGSLYVHVFFARSGYPPDPNDPEYQPLAVFGKTHSIVVYYPKSKADKRRSLLRNPKDS 183
+ NG+LY VF ++G P DP L T+ + PK SL+ +
Sbjct: 98 RKNGTLYAMVFLHQAGVSP-WQDPHQVHLVTQLTTYML----PKPP---EISLITGQDEP 149
Query: 184 EEAQPLVQAVDDPQGDSEDDGPVEWISFWKPNITINLVDDFTRYPSNAAPPNIAPYLNVE 243
E+ Q+ DSE D PV S W+ +T+N+V + + A P ++ Y+ V
Sbjct: 150 EKPDQQKQS-----SDSELDRPV---SHWRSRLTLNVVSENFLFDREALPGDVHRYMRVY 201
Query: 244 PTTGN--YFPTIFFNEFWLLRDKLIPINETVTELPLNLEVGPISMTKWQLFLQIDQSFQI 301
+ Y P +F +E L+ IN + TELPL + I++ K + ++ + +
Sbjct: 202 QSGKKMIYLPLLFVDELSNRVKDLMEINSSSTELPLTITYDSIALGKLRFWIHMQDAVYS 261
Query: 302 HRSYGSMLEGEADELKRVFLEGNPYLLVITMVVSLLHSVFDFLAFKNDIQFWNKNKSMEG 361
+ +G E +ADE+K +F++ N Y L +T V+ H +FDFLAFKNDI FW KSM G
Sbjct: 262 LQQFG-FTEKDADEIKGIFVDTNLYFLALTFFVAAFHLLFDFLAFKNDISFWKHKKSMVG 320
Query: 362 LSAKSVVVNFICQLIVFLYLLDNDTSWMILASSGVGCCIEFWKIGKAMHIEIDRSGTIPM 421
+S+K+V+ +++FLYLLD TS ++L +G+G IE WK+ KA I + G P
Sbjct: 321 MSSKAVLWRCFSTIVIFLYLLDEQTSLLVLVPAGIGSLIEVWKVKKAFKIHVIWRGLTPT 380
Query: 422 LRFRDRESYAGNKTKEYDDIAMKYLSGVLFFLAICSSIYSLMYERHKSWYSWILSSLTSC 481
F + + +T+EYD +AMKYLS +L+ L + ++Y+L++ ++KSWYSWI++SL +
Sbjct: 381 FLFGKLDE-SEKRTEEYDTLAMKYLSYLLYPLCVGGAVYALVFVKYKSWYSWIINSLVNG 439
Query: 482 VYMFGFTMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRD 541
VY FGF M PQLF+NYKLKSVAHLPW+ YK NT IDD+FAF+I MPT HRL+ FRD
Sbjct: 440 VYAFGFLFMLPQLFVNYKLKSVAHLPWKAFMYKAFNTFIDDVFAFIITMPTSHRLACFRD 499
Query: 542 DLVFLIYLYQRWIYKVDKTRVNEFGFAGED 571
D+VFL+YLYQRW+Y VD++RVNE+G + ++
Sbjct: 500 DVVFLVYLYQRWLYPVDRSRVNEYGVSYDE 529
>sp|Q5R7B1|CLP1L_PONAB Cleft lip and palate transmembrane protein 1-like protein OS=Pongo
abelii GN=CLPTM1L PE=2 SV=1
Length = 538
Score = 333 bits (853), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 185/463 (39%), Positives = 276/463 (59%), Gaps = 28/463 (6%)
Query: 124 KNNGSLYVHVFFARSGYPPDPNDPEYQ---PLAVFGKTHSIVVYYPKSKADKRRSLLRNP 180
+NNG+LY ++F +G P + + PL + PK + +LL
Sbjct: 99 RNNGTLYAYIFLHHAGVLPWHDGKQVHLVSPLTTY--------MVPKPE---EINLLTGE 147
Query: 181 KDSEEAQPLVQAVDDPQGDSEDDGPVEWISFWKPNITINLVDDFTRYPSNAAPPNIAPYL 240
D+++ ++A P S D PV S W+P + +N++ D + ++ P ++ Y+
Sbjct: 148 SDTQQ----IEAEKKPT--SALDEPV---SHWRPRLALNVMADNFVFDGSSLPADVHRYM 198
Query: 241 NVEP--TTGNYFPTIFFNEFWLLRDKLIPINETVTELPLNLEVGPISMTKWQLFLQIDQS 298
+ T +Y P +F ++ L+ IN + TELPL + +S+ + + ++ + +
Sbjct: 199 KMIQLGKTVHYLPILFIDQLSNRVKDLMVINRSTTELPLTVSYDKVSLGRLRFWIHMQDA 258
Query: 299 FQIHRSYGSMLEGEADELKRVFLEGNPYLLVITMVVSLLHSVFDFLAFKNDIQFWNKNKS 358
+ +G E +ADE+K +F++ N Y L +T V+ H +FDFLAFKNDI FW K KS
Sbjct: 259 VYSLQQFG-FSEKDADEVKGIFVDTNLYFLALTFFVAAFHLLFDFLAFKNDISFWKKKKS 317
Query: 359 MEGLSAKSVVVNFICQLIVFLYLLDNDTSWMILASSGVGCCIEFWKIGKAMHIEIDRSGT 418
M G+S K+V+ +++FL+LLD TS ++L +GVG IE WK+ KA+ + I G
Sbjct: 318 MIGMSTKAVLWRCFSTVVIFLFLLDEQTSLLVLVPAGVGAAIELWKVKKALKMTILWRGL 377
Query: 419 IPMLRFRDRESYAGNKTKEYDDIAMKYLSGVLFFLAICSSIYSLMYERHKSWYSWILSSL 478
+P S + KT+EYD AMKYLS +L+ L + ++YSL+ ++KSWYSW+++S
Sbjct: 378 MPEFEL-GTYSESERKTEEYDTQAMKYLSYLLYPLCVGGAVYSLLNIKYKSWYSWLINSF 436
Query: 479 TSCVYMFGFTMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSV 538
+ VY FGF M PQLF+NYKLKSVAHLPW+ TYK NT IDD+FAF+I MPT HRL+
Sbjct: 437 VNGVYAFGFLFMLPQLFVNYKLKSVAHLPWKAFTYKAFNTFIDDVFAFIITMPTSHRLAC 496
Query: 539 FRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGEDDKVSDGTETD 581
FRDD+VFL+YLYQRW+Y VDK RVNEFG + E +K + TD
Sbjct: 497 FRDDVVFLVYLYQRWLYPVDKRRVNEFGESYE-EKAARAPHTD 538
>sp|A2VE61|CLP1L_BOVIN Cleft lip and palate transmembrane protein 1-like protein OS=Bos
taurus GN=CLPTM1L PE=2 SV=1
Length = 538
Score = 332 bits (852), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 184/453 (40%), Positives = 271/453 (59%), Gaps = 27/453 (5%)
Query: 124 KNNGSLYVHVFFARSGYPPDPNDPEYQPLAVFGKTHSIVVYYPKSKADKRRSLLRNPKDS 183
+NNG+LY +VF +G P ND + L S + Y + ++ L P
Sbjct: 99 RNNGTLYAYVFLHHAGVLP-WNDAKQVHLV------SPLTTYMVPRPEEVSLLAGGPAAQ 151
Query: 184 E---EAQPLVQAVDDPQGDSEDDGPVEWISFWKPNITINLVDDFTRYPSNAAPPNIAPYL 240
+ E +P A+D+P +S W+P +T+N++ D + + P ++ Y+
Sbjct: 152 QIEAEKRP-TSALDEP------------VSHWRPRLTLNVMVDNFVFDGASLPADVQRYM 198
Query: 241 NVEP--TTGNYFPTIFFNEFWLLRDKLIPINETVTELPLNLEVGPISMTKWQLFLQIDQS 298
+ T Y P +F ++ L+ IN + TELPL + IS+ + + ++ + +
Sbjct: 199 KMIQLGKTVQYLPILFIDQLSNRVKDLMVINRSSTELPLTVSYDKISLGRLRFWIHMQDA 258
Query: 299 FQIHRSYGSMLEGEADELKRVFLEGNPYLLVITMVVSLLHSVFDFLAFKNDIQFWNKNKS 358
+ +G E +ADE+K +F++ N Y L +T V+ H +FDFLAFKNDI FW K KS
Sbjct: 259 VYSLQQFG-FSEKDADEVKGIFVDTNLYFLALTFFVAAFHLLFDFLAFKNDISFWKKKKS 317
Query: 359 MEGLSAKSVVVNFICQLIVFLYLLDNDTSWMILASSGVGCCIEFWKIGKAMHIEIDRSGT 418
M G+S K+V+ +++FL+LLD TS +L +G+G IE WK+ KA+ + + G
Sbjct: 318 MIGMSTKAVLWRCFSTVVIFLFLLDEQTSLPVLVPAGIGAAIELWKVKKALKMTVIWRGL 377
Query: 419 IPMLRFRDRESYAGNKTKEYDDIAMKYLSGVLFFLAICSSIYSLMYERHKSWYSWILSSL 478
P +F S + +T+EYD AMKYLS +L+ L I +IYSL+ ++KSWYSW+++S
Sbjct: 378 WPTFQF-GTYSESERRTEEYDAQAMKYLSYLLYPLCIGGAIYSLLNIKYKSWYSWLINSF 436
Query: 479 TSCVYMFGFTMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSV 538
+ VY FGF M PQLF+NYK+KSVAHLPW+ TYK NT IDD+FAF+I MPT HRL+
Sbjct: 437 VNGVYAFGFLFMLPQLFVNYKMKSVAHLPWKAFTYKAFNTFIDDVFAFIITMPTSHRLAC 496
Query: 539 FRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGED 571
FRDD+VFL+YLYQRW+Y VDK+RVNEFG + ED
Sbjct: 497 FRDDVVFLVYLYQRWLYPVDKSRVNEFGESYED 529
>sp|Q5ZKJ0|CLP1L_CHICK Cleft lip and palate transmembrane protein 1-like protein OS=Gallus
gallus GN=CLPTM1L PE=2 SV=1
Length = 536
Score = 331 bits (848), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 180/456 (39%), Positives = 274/456 (60%), Gaps = 34/456 (7%)
Query: 124 KNNGSLYVHVFFARSGYPPDPNDPEYQ---PLAVFGKTHSIVVYYPKSKADKRRSLLRNP 180
+NNG+LY ++F +G P + + PL + PK + +LL
Sbjct: 100 RNNGTLYAYIFLHHAGVLPWHDGKQVHIVSPLTTY--------MVPKPE---EINLLTGE 148
Query: 181 KDSE--EAQPLVQAVDDPQGDSEDDGPVEWISFWKPNITIN-LVDDFTRYPSNAAPPNIA 237
++ EA+ A+D+P +S W+ +T+N +V+DF + ++ P ++
Sbjct: 149 STTQQIEAEKQTSALDEP------------VSHWRSRLTLNVMVEDFV-FDGSSLPADVH 195
Query: 238 PYLNVEP--TTGNYFPTIFFNEFWLLRDKLIPINETVTELPLNLEVGPISMTKWQLFLQI 295
Y+ + T +Y P +F ++ L+ IN + TELPL + IS+ K + ++ +
Sbjct: 196 RYMKMVQLGKTVHYLPILFIDQLSNRVKDLMVINRSTTELPLTVSYDKISLGKLRFWIHM 255
Query: 296 DQSFQIHRSYGSMLEGEADELKRVFLEGNPYLLVITMVVSLLHSVFDFLAFKNDIQFWNK 355
+ + +G E +ADE+K +F++ N Y L +T V+ H +FDFLAFKNDI FW K
Sbjct: 256 QDAVYSLQQFG-FSEKDADEVKGIFVDTNLYFLALTFFVAAFHLLFDFLAFKNDISFWKK 314
Query: 356 NKSMEGLSAKSVVVNFICQLIVFLYLLDNDTSWMILASSGVGCCIEFWKIGKAMHIEIDR 415
+SM G+S K+V+ +++FL+LLD TS ++L +G+G IE WK+ KA+ + +
Sbjct: 315 KRSMIGMSTKAVLWRCFSTVVIFLFLLDEQTSLLVLIPAGIGAVIELWKVKKALKMTVKW 374
Query: 416 SGTIPMLRFRDRESYAGNKTKEYDDIAMKYLSGVLFFLAICSSIYSLMYERHKSWYSWIL 475
G P ++F + KT+EYD AMKYLS +L+ L I + YSL+ ++KSWYSW++
Sbjct: 375 QGIRPKVQFGASND-SEKKTEEYDTQAMKYLSYLLYPLCIGGAAYSLLNVKYKSWYSWLI 433
Query: 476 SSLTSCVYMFGFTMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHR 535
+S + VY FGF M PQLF+NYK+KSVAHLPW+ TYK NT IDD+FAF+I MPT HR
Sbjct: 434 NSFVNGVYAFGFLFMLPQLFVNYKMKSVAHLPWKAFTYKAFNTFIDDIFAFIITMPTSHR 493
Query: 536 LSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGED 571
L+ FRDD+VFL+YLYQRW+Y VDK+RVNE+G + E+
Sbjct: 494 LACFRDDVVFLVYLYQRWLYPVDKSRVNEYGESYEE 529
>sp|Q2HCV1|PESC_CHAGB Pescadillo homolog OS=Chaetomium globosum (strain ATCC 6205 / CBS
148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=NOP7 PE=3
SV=1
Length = 660
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 17/86 (19%)
Query: 187 QPLVQAVDDPQGDSEDDGPVEWIS---------FWKPNITINLVDDFTRY------PSNA 231
+P+VQA + +GD ED+ + + + +P + V+D P A
Sbjct: 420 RPVVQAAMNEEGDGEDNQTSQKVGPNHRYPGRLYVQPQWVWDSVNDEELKSPELYGPGAA 479
Query: 232 APPNIAPYLNVEPTTGNYFPTIFFNE 257
PP+++P+ V+PT G Y PTI E
Sbjct: 480 LPPHLSPF--VKPTQGQYDPTIPLEE 503
>sp|Q767L8|MDC1_PIG Mediator of DNA damage checkpoint protein 1 OS=Sus scrofa GN=MDC1
PE=3 SV=1
Length = 2042
Score = 33.5 bits (75), Expect = 4.5, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 10/106 (9%)
Query: 142 PDPNDPEYQPLAVFGKTHSIVVYYPKSKADKRRSLLRNPKDSEEAQPLVQAVDDPQGDSE 201
P+PN P L T V P S+A + R+ + K SE P+V A +PQ +
Sbjct: 1188 PEPNIPTAPELQPSTPTDQPVAPEPLSRATRGRTPRASVKTSE---PVVPAAPEPQPSTP 1244
Query: 202 DDGPVEWISFWKPNITINLVDDFTRYPSNAAP-PNIAPYLNVEPTT 246
D PV P T+ T S P PNI + P+T
Sbjct: 1245 TDQPV------VPKPTLRAPRGRTHRSSVKTPEPNIPTAPELRPST 1284
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 238,344,416
Number of Sequences: 539616
Number of extensions: 10540882
Number of successful extensions: 27554
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 27463
Number of HSP's gapped (non-prelim): 38
length of query: 592
length of database: 191,569,459
effective HSP length: 123
effective length of query: 469
effective length of database: 125,196,691
effective search space: 58717248079
effective search space used: 58717248079
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)