Query 007702
Match_columns 592
No_of_seqs 591 out of 4398
Neff 8.3
Searched_HMMs 46136
Date Thu Mar 28 14:11:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007702.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007702hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 6.5E-33 1.4E-37 296.2 32.0 212 3-215 8-237 (485)
2 KOG0254 Predicted transporter 100.0 1.6E-30 3.5E-35 287.5 29.7 204 3-208 42-254 (513)
3 PF00083 Sugar_tr: Sugar (and 99.9 4E-29 8.7E-34 271.6 -8.3 302 9-327 3-329 (451)
4 TIGR00887 2A0109 phosphate:H+ 99.9 1.9E-24 4E-29 238.7 20.5 206 3-209 13-251 (502)
5 TIGR01299 synapt_SV2 synaptic 99.9 3.7E-23 8E-28 234.4 26.2 208 3-211 164-382 (742)
6 PRK10077 xylE D-xylose transpo 99.9 5.4E-24 1.2E-28 233.1 17.8 206 5-211 11-242 (479)
7 PRK10642 proline/glycine betai 99.9 1.4E-21 3E-26 215.2 20.7 187 6-193 16-222 (490)
8 COG2814 AraJ Arabinose efflux 99.9 2.7E-20 5.8E-25 194.0 22.4 228 2-237 9-236 (394)
9 TIGR00879 SP MFS transporter, 99.8 1.5E-20 3.2E-25 204.0 17.5 208 3-211 25-244 (481)
10 TIGR02332 HpaX 4-hydroxyphenyl 99.8 5.6E-20 1.2E-24 198.0 21.5 185 4-188 6-194 (412)
11 TIGR00898 2A0119 cation transp 99.8 1.3E-21 2.9E-26 215.9 8.6 179 27-211 110-291 (505)
12 KOG0255 Synaptic vesicle trans 99.8 2.1E-20 4.5E-25 207.4 12.9 171 34-210 111-281 (521)
13 TIGR00891 2A0112 putative sial 99.8 1.5E-18 3.2E-23 184.8 24.8 188 3-191 9-196 (405)
14 PRK11551 putative 3-hydroxyphe 99.8 2.7E-18 5.8E-23 184.0 25.8 189 2-192 11-199 (406)
15 PRK12307 putative sialic acid 99.8 9.1E-19 2E-23 188.8 21.8 183 5-190 17-199 (426)
16 PRK10406 alpha-ketoglutarate t 99.8 2.6E-18 5.6E-23 186.2 24.3 187 3-190 19-225 (432)
17 PRK14995 methyl viologen resis 99.8 1.7E-18 3.8E-23 190.8 23.1 186 1-188 1-187 (495)
18 KOG0253 Synaptic vesicle trans 99.8 8.4E-20 1.8E-24 183.4 10.8 204 5-213 77-280 (528)
19 TIGR00903 2A0129 major facilit 99.8 3.4E-18 7.3E-23 181.2 20.8 167 21-190 6-172 (368)
20 KOG1330 Sugar transporter/spin 99.8 5.2E-20 1.1E-24 191.3 5.9 187 1-188 28-214 (493)
21 PRK09952 shikimate transporter 99.8 8.7E-18 1.9E-22 182.4 22.9 187 5-193 21-229 (438)
22 PRK03545 putative arabinose tr 99.8 9E-18 1.9E-22 179.3 22.6 184 3-188 6-189 (390)
23 PRK15075 citrate-proton sympor 99.8 4.2E-18 9.1E-23 184.6 19.6 185 4-189 13-217 (434)
24 TIGR00893 2A0114 d-galactonate 99.8 6.4E-19 1.4E-23 185.9 12.1 172 15-188 3-174 (399)
25 TIGR00890 2A0111 Oxalate/Forma 99.8 4.9E-18 1.1E-22 178.5 17.6 176 9-188 7-182 (377)
26 PRK15403 multidrug efflux syst 99.8 2.4E-17 5.2E-22 177.6 22.6 181 6-188 16-196 (413)
27 PRK10213 nepI ribonucleoside t 99.8 2.7E-17 5.9E-22 176.0 22.7 185 2-188 16-200 (394)
28 TIGR00895 2A0115 benzoate tran 99.8 2.4E-17 5.3E-22 174.7 21.3 188 4-193 15-202 (398)
29 KOG0252 Inorganic phosphate tr 99.8 2.4E-18 5.2E-23 178.1 11.8 188 2-190 37-252 (538)
30 PRK10091 MFS transport protein 99.8 5.7E-17 1.2E-21 172.7 21.8 178 8-187 5-182 (382)
31 PRK15402 multidrug efflux syst 99.8 9E-17 1.9E-21 172.4 23.2 186 2-189 9-194 (406)
32 PRK11663 regulatory protein Uh 99.8 5.5E-17 1.2E-21 175.9 21.2 182 6-189 23-204 (434)
33 TIGR00710 efflux_Bcr_CflA drug 99.8 7.9E-17 1.7E-21 170.7 21.8 178 9-188 8-185 (385)
34 TIGR00711 efflux_EmrB drug res 99.7 3.2E-17 7E-22 179.6 19.4 180 7-188 3-182 (485)
35 TIGR00886 2A0108 nitrite extru 99.7 4E-17 8.6E-22 172.0 18.7 178 10-188 5-193 (366)
36 PRK03893 putative sialic acid 99.7 1.7E-16 3.7E-21 174.7 23.9 185 4-191 18-202 (496)
37 PRK10473 multidrug efflux syst 99.7 9.1E-17 2E-21 171.5 20.3 171 15-187 12-182 (392)
38 PRK10133 L-fucose transporter; 99.7 1.5E-16 3.2E-21 172.7 21.6 148 4-151 24-174 (438)
39 PF07690 MFS_1: Major Facilita 99.7 9.5E-17 2.1E-21 167.4 18.7 175 12-188 2-177 (352)
40 PRK11652 emrD multidrug resist 99.7 4.6E-16 9.9E-21 166.2 23.3 185 3-189 5-189 (394)
41 PRK09556 uhpT sugar phosphate 99.7 1E-16 2.2E-21 175.4 17.7 186 4-189 27-218 (467)
42 COG2271 UhpC Sugar phosphate p 99.7 2.9E-16 6.4E-21 162.0 16.9 187 3-189 26-212 (448)
43 PRK10642 proline/glycine betai 99.7 1.3E-15 2.9E-20 167.7 23.2 190 26-220 270-469 (490)
44 PRK10504 putative transporter; 99.7 1.3E-15 2.7E-20 166.8 22.0 180 6-187 10-189 (471)
45 TIGR00881 2A0104 phosphoglycer 99.7 1.5E-16 3.2E-21 167.4 14.0 175 13-188 2-176 (379)
46 TIGR00900 2A0121 H+ Antiporter 99.7 1.6E-15 3.4E-20 158.9 20.9 166 11-178 4-174 (365)
47 TIGR00894 2A0114euk Na(+)-depe 99.7 1.9E-16 4.1E-21 173.1 14.1 185 3-189 16-225 (465)
48 TIGR00883 2A0106 metabolite-pr 99.7 3.8E-16 8.3E-21 165.2 15.7 175 15-190 2-197 (394)
49 PRK03699 putative transporter; 99.7 2.5E-15 5.4E-20 160.8 21.9 175 3-178 4-178 (394)
50 PLN00028 nitrate transmembrane 99.7 3.6E-15 7.7E-20 163.7 23.6 183 4-187 34-223 (476)
51 PRK11273 glpT sn-glycerol-3-ph 99.7 1.7E-15 3.7E-20 165.1 20.7 182 5-189 28-214 (452)
52 PRK11043 putative transporter; 99.7 5.9E-15 1.3E-19 158.0 23.9 176 9-187 9-184 (401)
53 PRK09705 cynX putative cyanate 99.7 2.2E-15 4.7E-20 161.3 20.0 149 23-174 26-175 (393)
54 TIGR00885 fucP L-fucose:H+ sym 99.7 6.2E-15 1.3E-19 158.7 23.1 179 7-185 4-210 (410)
55 PRK11102 bicyclomycin/multidru 99.7 2.9E-15 6.4E-20 158.6 20.0 166 21-188 6-171 (377)
56 PRK12382 putative transporter; 99.6 1.1E-14 2.4E-19 155.4 22.1 166 7-174 16-190 (392)
57 PRK05122 major facilitator sup 99.6 1E-14 2.2E-19 155.9 21.2 167 6-174 15-190 (399)
58 PTZ00207 hypothetical protein; 99.6 2.1E-14 4.6E-19 158.8 23.6 200 3-208 25-232 (591)
59 TIGR00899 2A0120 sugar efflux 99.6 1.2E-14 2.5E-19 153.6 19.3 175 13-189 4-182 (375)
60 PRK09874 drug efflux system pr 99.6 3E-14 6.6E-19 152.4 21.9 176 9-187 17-197 (408)
61 TIGR00712 glpT glycerol-3-phos 99.6 1.4E-14 3E-19 157.3 19.4 183 5-189 26-212 (438)
62 PRK11195 lysophospholipid tran 99.6 3.9E-14 8.5E-19 151.6 21.5 179 1-189 1-179 (393)
63 PRK11646 multidrug resistance 99.6 5.9E-14 1.3E-18 150.6 22.8 172 12-186 16-188 (400)
64 PRK03633 putative MFS family t 99.6 4.6E-14 1E-18 150.2 21.4 150 1-150 1-150 (381)
65 PRK10054 putative transporter; 99.6 5.6E-14 1.2E-18 150.5 22.0 171 13-186 14-185 (395)
66 PRK15034 nitrate/nitrite trans 99.6 9.1E-14 2E-18 149.8 23.6 180 7-187 35-236 (462)
67 cd06174 MFS The Major Facilita 99.6 3.4E-14 7.4E-19 147.5 19.3 168 10-179 3-170 (352)
68 TIGR00806 rfc RFC reduced fola 99.6 7.2E-14 1.6E-18 148.4 21.8 177 7-188 28-207 (511)
69 TIGR00805 oat sodium-independe 99.6 5.7E-15 1.2E-19 166.9 11.6 180 6-186 33-283 (633)
70 TIGR00892 2A0113 monocarboxyla 99.6 5E-14 1.1E-18 153.7 18.7 178 5-185 18-196 (455)
71 TIGR00897 2A0118 polyol permea 99.6 3.7E-13 8.1E-18 144.4 22.4 171 13-185 20-195 (402)
72 TIGR00901 2A0125 AmpG-related 99.5 9.1E-14 2E-18 146.3 16.4 162 22-187 4-182 (356)
73 KOG2533 Permease of the major 99.5 1.1E-13 2.4E-18 150.3 16.6 184 5-188 44-232 (495)
74 PF06609 TRI12: Fungal trichot 99.5 4.3E-13 9.3E-18 147.7 20.3 168 11-182 49-216 (599)
75 KOG2532 Permease of the major 99.5 2.5E-13 5.4E-18 147.2 17.5 154 34-189 66-222 (466)
76 PRK10207 dipeptide/tripeptide 99.5 6.5E-13 1.4E-17 146.0 19.6 161 8-170 16-181 (489)
77 PRK10489 enterobactin exporter 99.5 4.9E-13 1.1E-17 144.1 17.9 173 13-188 24-201 (417)
78 PRK08633 2-acyl-glycerophospho 99.5 6.1E-13 1.3E-17 161.3 20.7 164 26-189 30-205 (1146)
79 TIGR00896 CynX cyanate transpo 99.5 6.1E-13 1.3E-17 140.0 17.1 149 23-173 17-165 (355)
80 TIGR00880 2_A_01_02 Multidrug 99.5 3.5E-13 7.5E-18 120.5 12.6 138 47-186 4-141 (141)
81 TIGR00924 yjdL_sub1_fam amino 99.5 1.5E-12 3.2E-17 142.9 20.1 164 9-174 13-183 (475)
82 PRK15011 sugar efflux transpor 99.5 4.6E-12 1E-16 135.5 21.2 176 9-187 18-198 (393)
83 KOG2615 Permease of the major 99.5 9.8E-13 2.1E-17 133.9 14.7 147 39-186 66-216 (451)
84 PRK11010 ampG muropeptide tran 99.5 9.4E-12 2E-16 137.2 23.8 174 10-188 16-199 (491)
85 COG2223 NarK Nitrate/nitrite t 99.5 1.5E-12 3.2E-17 135.0 16.1 181 5-189 13-199 (417)
86 PRK11902 ampG muropeptide tran 99.4 1.3E-11 2.8E-16 132.5 22.8 173 12-189 5-187 (402)
87 KOG3764 Vesicular amine transp 99.4 4.7E-13 1E-17 137.0 9.1 149 36-186 101-250 (464)
88 TIGR01299 synapt_SV2 synaptic 99.4 3.1E-11 6.7E-16 137.6 22.8 139 44-186 598-736 (742)
89 TIGR00902 2A0127 phenyl propri 99.4 2.6E-11 5.7E-16 129.2 19.7 158 11-172 9-168 (382)
90 PRK09584 tppB putative tripept 99.4 4.5E-11 9.8E-16 132.0 20.9 163 10-174 25-192 (500)
91 PRK11128 putative 3-phenylprop 99.4 3E-11 6.6E-16 128.6 18.7 166 14-186 12-181 (382)
92 PRK15011 sugar efflux transpor 99.3 1.2E-10 2.6E-15 124.6 22.1 153 29-185 240-392 (393)
93 PRK06814 acylglycerophosphoeth 99.3 3.6E-11 7.9E-16 145.8 20.3 176 9-187 18-198 (1140)
94 TIGR00889 2A0110 nucleoside tr 99.3 6.1E-11 1.3E-15 128.0 19.8 146 41-186 251-405 (418)
95 PRK09528 lacY galactoside perm 99.3 5.2E-11 1.1E-15 128.5 18.4 149 36-186 257-406 (420)
96 PRK15462 dipeptide/tripeptide 99.3 1.1E-10 2.4E-15 127.3 20.9 162 11-174 14-180 (493)
97 TIGR00882 2A0105 oligosacchari 99.3 1.4E-10 3E-15 124.1 21.5 174 10-188 6-188 (396)
98 COG0738 FucP Fucose permease [ 99.3 7.9E-11 1.7E-15 121.6 18.0 182 5-186 12-214 (422)
99 cd06174 MFS The Major Facilita 99.3 1.8E-10 3.8E-15 119.5 20.0 163 14-178 183-347 (352)
100 PRK10077 xylE D-xylose transpo 99.3 3E-10 6.5E-15 124.4 21.6 162 25-186 290-460 (479)
101 TIGR00890 2A0111 Oxalate/Forma 99.3 1.5E-10 3.3E-15 121.5 18.0 147 26-174 225-373 (377)
102 PRK09556 uhpT sugar phosphate 99.3 3.8E-10 8.2E-15 123.6 20.8 166 11-178 263-444 (467)
103 TIGR00792 gph sugar (Glycoside 99.2 9.4E-11 2E-15 126.8 15.7 169 19-187 12-198 (437)
104 PRK05122 major facilitator sup 99.2 5.1E-10 1.1E-14 119.7 21.1 156 25-184 235-390 (399)
105 TIGR01301 GPH_sucrose GPH fami 99.2 4.6E-10 1E-14 122.0 20.6 175 14-188 12-223 (477)
106 PRK11551 putative 3-hydroxyphe 99.2 6.3E-10 1.4E-14 119.2 21.5 153 24-178 238-391 (406)
107 TIGR00879 SP MFS transporter, 99.2 2.5E-10 5.5E-15 123.7 16.2 164 22-187 300-474 (481)
108 PRK12382 putative transporter; 99.2 8.8E-10 1.9E-14 117.6 20.0 156 24-183 234-389 (392)
109 PRK09874 drug efflux system pr 99.2 1.4E-09 3E-14 116.4 19.9 139 43-183 260-398 (408)
110 TIGR00899 2A0120 sugar efflux 99.2 2.1E-09 4.6E-14 113.4 20.9 151 30-184 224-374 (375)
111 PRK09528 lacY galactoside perm 99.2 1.9E-09 4E-14 116.4 20.7 170 13-187 17-195 (420)
112 PRK09952 shikimate transporter 99.2 4E-09 8.7E-14 114.6 23.1 157 29-186 274-435 (438)
113 PRK10489 enterobactin exporter 99.2 1.2E-09 2.7E-14 117.6 18.8 158 27-186 244-402 (417)
114 PRK03545 putative arabinose tr 99.1 4.8E-09 1E-13 111.9 22.3 155 27-185 227-382 (390)
115 TIGR00892 2A0113 monocarboxyla 99.1 2E-09 4.4E-14 117.5 18.8 151 24-176 259-414 (455)
116 TIGR00887 2A0109 phosphate:H+ 99.1 1.9E-09 4.2E-14 119.2 18.0 158 28-186 310-491 (502)
117 KOG2504 Monocarboxylate transp 99.1 4.3E-10 9.3E-15 123.5 12.2 179 7-188 47-226 (509)
118 TIGR00889 2A0110 nucleoside tr 99.1 5.4E-09 1.2E-13 112.9 20.2 168 11-188 7-184 (418)
119 TIGR00902 2A0127 phenyl propri 99.1 9E-09 2E-13 109.7 21.1 151 22-176 221-372 (382)
120 TIGR00883 2A0106 metabolite-pr 99.1 4.5E-09 9.7E-14 111.0 18.2 155 15-171 228-389 (394)
121 PRK03699 putative transporter; 99.1 8.6E-09 1.9E-13 110.3 20.5 162 14-178 213-375 (394)
122 TIGR02718 sider_RhtX_FptX side 99.1 2.1E-08 4.6E-13 107.0 23.3 177 8-186 3-187 (390)
123 PRK09705 cynX putative cyanate 99.1 8.4E-09 1.8E-13 110.4 20.2 161 24-188 223-386 (393)
124 TIGR00897 2A0118 polyol permea 99.1 1.6E-08 3.5E-13 108.5 21.8 161 17-181 233-399 (402)
125 PRK03633 putative MFS family t 99.1 1.3E-08 2.7E-13 108.4 20.7 149 23-176 217-365 (381)
126 TIGR00893 2A0114 d-galactonate 99.1 1E-08 2.2E-13 107.9 19.6 165 12-179 221-395 (399)
127 TIGR00891 2A0112 putative sial 99.0 5.3E-09 1.2E-13 111.2 17.5 138 28-167 261-400 (405)
128 PRK03893 putative sialic acid 99.0 7.8E-09 1.7E-13 113.8 18.9 143 28-172 297-442 (496)
129 PRK15075 citrate-proton sympor 99.0 2.8E-08 6.2E-13 107.8 22.3 123 24-146 256-384 (434)
130 PRK11273 glpT sn-glycerol-3-ph 99.0 3.5E-08 7.5E-13 107.7 21.4 159 25-185 272-438 (452)
131 TIGR00788 fbt folate/biopterin 99.0 1.5E-08 3.4E-13 111.0 18.2 176 7-187 27-212 (468)
132 PRK10406 alpha-ketoglutarate t 99.0 6.7E-08 1.4E-12 104.8 22.6 153 30-185 268-425 (432)
133 PRK08633 2-acyl-glycerophospho 99.0 2.1E-08 4.6E-13 121.8 20.4 158 28-186 255-413 (1146)
134 PF11700 ATG22: Vacuole efflux 99.0 5.8E-08 1.3E-12 106.1 21.4 169 15-186 292-470 (477)
135 COG2807 CynX Cyanate permease 99.0 5.1E-08 1.1E-12 99.6 19.2 169 6-177 12-180 (395)
136 PRK11663 regulatory protein Uh 98.9 4E-08 8.7E-13 106.6 19.5 169 15-185 252-426 (434)
137 TIGR00882 2A0105 oligosacchari 98.9 5.5E-08 1.2E-12 104.0 20.3 143 37-181 250-393 (396)
138 TIGR00895 2A0115 benzoate tran 98.9 3.6E-08 7.7E-13 104.4 18.6 135 15-149 259-393 (398)
139 PF05977 MFS_3: Transmembrane 98.9 4.7E-08 1E-12 108.0 20.0 160 13-174 17-181 (524)
140 PRK10504 putative transporter; 98.9 5.6E-08 1.2E-12 106.4 20.4 133 17-149 272-408 (471)
141 TIGR00898 2A0119 cation transp 98.9 1.7E-08 3.8E-13 111.4 16.5 135 47-186 361-497 (505)
142 PRK12307 putative sialic acid 98.9 7.5E-08 1.6E-12 103.8 21.0 136 26-163 251-388 (426)
143 TIGR00792 gph sugar (Glycoside 98.9 4.8E-08 1E-12 105.6 19.2 112 39-150 255-374 (437)
144 PF13347 MFS_2: MFS/sugar tran 98.9 4E-09 8.7E-14 114.2 10.6 159 27-185 23-200 (428)
145 KOG0569 Permease of the major 98.9 8.3E-08 1.8E-12 103.7 20.4 177 4-186 270-457 (485)
146 TIGR00900 2A0121 H+ Antiporter 98.9 4.2E-08 9.2E-13 102.5 17.8 123 27-149 232-356 (365)
147 COG2270 Permeases of the major 98.9 5.5E-08 1.2E-12 101.4 17.7 181 3-186 251-431 (438)
148 PF05977 MFS_3: Transmembrane 98.9 1.1E-07 2.4E-12 105.1 20.2 150 25-176 237-387 (524)
149 PF00083 Sugar_tr: Sugar (and 98.9 1.1E-10 2.4E-15 127.0 -3.8 120 437-592 196-316 (451)
150 TIGR00712 glpT glycerol-3-phos 98.9 6.4E-08 1.4E-12 105.2 17.6 155 30-186 276-436 (438)
151 PRK11128 putative 3-phenylprop 98.9 2.3E-07 4.9E-12 98.8 21.5 141 30-174 229-370 (382)
152 KOG2325 Predicted transporter/ 98.9 2.6E-08 5.7E-13 106.9 14.0 186 4-190 32-236 (488)
153 PRK11010 ampG muropeptide tran 98.9 2.4E-07 5.1E-12 102.3 21.8 156 28-186 245-405 (491)
154 TIGR00901 2A0125 AmpG-related 98.8 9E-08 1.9E-12 100.7 17.0 118 22-139 225-354 (356)
155 COG2271 UhpC Sugar phosphate p 98.8 1.3E-07 2.8E-12 98.6 17.2 175 7-183 253-434 (448)
156 PLN00028 nitrate transmembrane 98.8 1.2E-07 2.7E-12 104.1 18.1 152 28-184 275-433 (476)
157 PRK09669 putative symporter Ya 98.8 8.2E-08 1.8E-12 104.5 16.0 160 27-186 31-207 (444)
158 PRK15402 multidrug efflux syst 98.8 6E-07 1.3E-11 96.3 22.4 145 31-178 241-390 (406)
159 PF06813 Nodulin-like: Nodulin 98.8 2.8E-07 6E-12 91.7 18.0 162 21-187 17-185 (250)
160 PRK10054 putative transporter; 98.8 1.6E-07 3.5E-12 100.6 17.5 150 35-187 238-388 (395)
161 KOG0253 Synaptic vesicle trans 98.8 2.8E-08 6E-13 101.2 10.5 180 2-186 325-522 (528)
162 TIGR02718 sider_RhtX_FptX side 98.8 4.5E-07 9.8E-12 96.8 20.4 147 28-176 230-384 (390)
163 TIGR02332 HpaX 4-hydroxyphenyl 98.7 2.5E-07 5.4E-12 99.7 16.6 158 12-171 248-409 (412)
164 COG0477 ProP Permeases of the 98.7 8.6E-07 1.9E-11 88.6 19.3 164 11-174 7-176 (338)
165 PRK10429 melibiose:sodium symp 98.7 3.4E-07 7.3E-12 100.6 17.5 176 12-187 12-205 (473)
166 PRK06814 acylglycerophosphoeth 98.7 3.6E-07 7.8E-12 111.2 19.4 147 29-176 249-415 (1140)
167 PF05631 DUF791: Protein of un 98.7 1.8E-06 3.9E-11 89.0 20.8 154 32-186 60-219 (354)
168 PRK10213 nepI ribonucleoside t 98.7 2.4E-06 5.1E-11 91.6 22.2 143 28-174 239-382 (394)
169 PRK09848 glucuronide transport 98.7 9.6E-07 2.1E-11 96.2 19.3 124 27-150 249-382 (448)
170 TIGR00711 efflux_EmrB drug res 98.7 7.5E-07 1.6E-11 97.6 18.3 123 26-148 275-402 (485)
171 COG2814 AraJ Arabinose efflux 98.7 1.4E-06 3.1E-11 91.6 19.4 159 19-181 225-384 (394)
172 TIGR00710 efflux_Bcr_CflA drug 98.7 2.3E-06 5E-11 90.4 21.4 132 31-166 232-369 (385)
173 COG3104 PTR2 Dipeptide/tripept 98.7 3.7E-07 8E-12 97.3 14.7 166 10-177 25-200 (498)
174 PRK10091 MFS transport protein 98.7 2.4E-06 5.2E-11 91.0 21.2 147 28-178 222-371 (382)
175 TIGR00881 2A0104 phosphoglycer 98.6 5.1E-07 1.1E-11 94.8 15.2 149 15-165 225-379 (379)
176 PRK11195 lysophospholipid tran 98.6 2.7E-06 5.9E-11 91.1 21.0 140 30-171 230-370 (393)
177 TIGR00903 2A0129 major facilit 98.6 3.1E-06 6.8E-11 89.8 21.0 157 15-179 201-361 (368)
178 PF03825 Nuc_H_symport: Nucleo 98.6 2.9E-06 6.2E-11 91.0 20.7 174 11-187 7-183 (400)
179 KOG2563 Permease of the major 98.6 1.2E-06 2.6E-11 92.1 16.9 231 2-235 41-289 (480)
180 PRK11646 multidrug resistance 98.6 2.2E-06 4.7E-11 92.0 18.6 123 28-150 230-353 (400)
181 PF07690 MFS_1: Major Facilita 98.6 9.2E-07 2E-11 92.0 15.3 127 21-147 221-352 (352)
182 PRK11902 ampG muropeptide tran 98.6 5.1E-06 1.1E-10 89.1 21.3 144 29-178 233-385 (402)
183 KOG2504 Monocarboxylate transp 98.6 1E-06 2.3E-11 97.0 15.8 171 11-184 303-476 (509)
184 TIGR00896 CynX cyanate transpo 98.6 1.4E-06 3.1E-11 91.5 16.4 122 25-147 216-339 (355)
185 PRK14995 methyl viologen resis 98.6 2.9E-06 6.3E-11 93.8 18.9 118 30-147 284-404 (495)
186 TIGR01272 gluP glucose/galacto 98.6 5.8E-06 1.3E-10 85.7 19.8 152 13-169 147-301 (310)
187 PRK09669 putative symporter Ya 98.5 4.7E-06 1E-10 90.7 19.4 127 24-150 247-382 (444)
188 KOG0254 Predicted transporter 98.5 1.5E-06 3.2E-11 96.6 15.6 167 26-201 315-495 (513)
189 PRK10429 melibiose:sodium symp 98.5 6.3E-06 1.4E-10 90.5 20.4 128 22-149 247-386 (473)
190 PF01306 LacY_symp: LacY proto 98.5 2.1E-06 4.6E-11 91.1 15.3 166 15-186 234-403 (412)
191 PF11700 ATG22: Vacuole efflux 98.5 3.9E-06 8.5E-11 91.8 17.6 148 41-188 70-252 (477)
192 PF03825 Nuc_H_symport: Nucleo 98.5 1.3E-05 2.8E-10 86.0 21.2 171 14-186 215-398 (400)
193 PRK11102 bicyclomycin/multidru 98.5 1.8E-05 3.8E-10 83.7 21.8 116 31-147 220-340 (377)
194 PRK11462 putative transporter; 98.5 6.6E-06 1.4E-10 90.1 18.9 169 19-187 22-208 (460)
195 PRK10133 L-fucose transporter; 98.5 1.2E-05 2.7E-10 87.4 20.2 139 30-173 283-423 (438)
196 PF13347 MFS_2: MFS/sugar tran 98.4 4.9E-06 1.1E-10 90.1 16.8 138 12-150 231-378 (428)
197 PRK10473 multidrug efflux syst 98.4 1.3E-05 2.9E-10 85.4 19.9 114 31-146 229-343 (392)
198 TIGR00894 2A0114euk Na(+)-depe 98.4 5.3E-06 1.1E-10 90.8 17.1 167 11-180 266-447 (465)
199 TIGR00924 yjdL_sub1_fam amino 98.4 1.6E-05 3.4E-10 87.5 20.5 139 43-183 314-468 (475)
200 PRK15034 nitrate/nitrite trans 98.4 1.3E-05 2.9E-10 86.9 19.0 136 47-183 292-454 (462)
201 KOG4686 Predicted sugar transp 98.4 5.6E-06 1.2E-10 81.8 14.3 144 3-150 264-408 (459)
202 COG2223 NarK Nitrate/nitrite t 98.4 7.4E-06 1.6E-10 85.7 16.0 145 30-180 243-398 (417)
203 PRK11043 putative transporter; 98.4 4.4E-05 9.6E-10 81.6 22.7 118 28-146 225-347 (401)
204 KOG0252 Inorganic phosphate tr 98.4 3.3E-07 7.1E-12 96.2 4.4 181 6-198 304-506 (538)
205 PRK09848 glucuronide transport 98.3 1.5E-05 3.2E-10 86.8 17.2 114 28-141 31-157 (448)
206 PRK09584 tppB putative tripept 98.3 4.1E-05 8.9E-10 84.7 20.0 142 43-184 318-480 (500)
207 PF03137 OATP: Organic Anion T 98.3 1.6E-07 3.4E-12 104.2 -0.4 176 9-185 6-251 (539)
208 TIGR00886 2A0108 nitrite extru 98.2 1.3E-05 2.8E-10 84.3 13.7 113 29-142 249-365 (366)
209 PF06779 DUF1228: Protein of u 98.2 1.4E-05 3.1E-10 65.2 9.6 81 18-98 4-84 (85)
210 KOG2816 Predicted transporter 98.2 2.2E-05 4.7E-10 85.4 13.3 166 14-186 30-202 (463)
211 PF01306 LacY_symp: LacY proto 98.1 5E-05 1.1E-09 80.8 15.6 172 12-188 13-193 (412)
212 COG2211 MelB Na+/melibiose sym 98.1 8.1E-05 1.7E-09 80.1 16.9 175 14-188 20-212 (467)
213 KOG4686 Predicted sugar transp 98.1 1.6E-07 3.5E-12 92.4 -3.5 144 3-146 41-188 (459)
214 PRK11462 putative transporter; 98.1 0.0005 1.1E-08 75.3 23.2 124 24-147 246-378 (460)
215 PRK11652 emrD multidrug resist 98.1 0.00043 9.4E-09 73.8 21.4 118 31-149 233-353 (394)
216 COG2211 MelB Na+/melibiose sym 98.1 0.00023 5.1E-09 76.6 19.0 134 14-147 244-387 (467)
217 TIGR01301 GPH_sucrose GPH fami 98.1 0.0002 4.3E-09 78.3 18.6 143 45-187 309-475 (477)
218 COG2807 CynX Cyanate permease 98.1 0.00038 8.3E-09 71.7 19.2 157 22-182 224-384 (395)
219 PF05978 UNC-93: Ion channel r 98.1 0.00031 6.7E-09 64.8 16.9 108 44-152 40-147 (156)
220 TIGR00788 fbt folate/biopterin 98.0 4.6E-05 9.9E-10 83.7 13.2 116 34-149 281-406 (468)
221 TIGR00926 2A1704 Peptide:H+ sy 98.0 0.00014 2.9E-09 82.6 17.2 155 26-180 8-179 (654)
222 PRK10207 dipeptide/tripeptide 98.0 0.00027 5.8E-09 78.0 18.0 139 43-181 311-474 (489)
223 TIGR00885 fucP L-fucose:H+ sym 98.0 0.00048 1E-08 74.2 19.4 107 37-146 265-371 (410)
224 KOG0255 Synaptic vesicle trans 98.0 0.00042 9.1E-09 77.1 19.1 132 53-187 362-496 (521)
225 COG2270 Permeases of the major 97.9 0.00029 6.3E-09 74.1 16.3 171 41-211 58-253 (438)
226 PF03092 BT1: BT1 family; Int 97.9 0.00015 3.2E-09 78.7 14.9 157 26-185 10-177 (433)
227 KOG3762 Predicted transporter 97.9 5.7E-05 1.2E-09 81.1 10.7 158 19-178 384-542 (618)
228 TIGR01272 gluP glucose/galacto 97.9 1.6E-05 3.5E-10 82.3 6.0 97 90-186 6-117 (310)
229 KOG3626 Organic anion transpor 97.8 6.8E-05 1.5E-09 84.3 9.2 180 6-186 97-345 (735)
230 KOG3764 Vesicular amine transp 97.8 9.1E-05 2E-09 77.0 8.7 158 22-181 286-452 (464)
231 PF03209 PUCC: PUCC protein; 97.7 0.0025 5.4E-08 67.2 19.2 117 32-149 6-144 (403)
232 PF12832 MFS_1_like: MFS_1 lik 97.7 0.00028 6E-09 57.0 9.3 71 11-81 5-75 (77)
233 KOG2532 Permease of the major 97.7 0.00055 1.2E-08 74.7 13.7 170 8-182 260-446 (466)
234 KOG2533 Permease of the major 97.6 0.00047 1E-08 75.6 12.8 159 8-167 275-440 (495)
235 PRK15403 multidrug efflux syst 97.6 0.0054 1.2E-07 66.1 20.7 119 27-146 239-363 (413)
236 PF01770 Folate_carrier: Reduc 97.6 0.0016 3.5E-08 69.2 15.6 159 28-188 26-186 (412)
237 COG0738 FucP Fucose permease [ 97.5 0.0063 1.4E-07 63.8 18.0 157 13-174 243-400 (422)
238 PF03209 PUCC: PUCC protein; 97.5 0.014 3E-07 61.6 20.6 147 30-176 233-391 (403)
239 PTZ00207 hypothetical protein; 97.3 0.0033 7.1E-08 70.4 14.6 160 28-189 375-558 (591)
240 PF06609 TRI12: Fungal trichot 97.3 0.0078 1.7E-07 67.3 17.4 139 12-150 316-461 (599)
241 PRK15462 dipeptide/tripeptide 97.1 0.036 7.8E-07 61.0 19.2 140 43-182 310-477 (493)
242 KOG1237 H+/oligopeptide sympor 97.0 0.014 3.1E-07 65.2 14.8 161 24-189 56-248 (571)
243 KOG2816 Predicted transporter 96.4 0.023 5E-07 62.0 11.3 119 31-150 267-386 (463)
244 KOG3098 Uncharacterized conser 96.3 0.31 6.7E-06 52.9 19.1 104 41-145 279-403 (461)
245 KOG3098 Uncharacterized conser 96.3 0.073 1.6E-06 57.6 13.9 105 47-152 56-160 (461)
246 PF06963 FPN1: Ferroportin1 (F 96.2 0.13 2.8E-06 55.6 15.6 128 26-153 278-415 (432)
247 KOG0637 Sucrose transporter an 96.2 0.012 2.6E-07 62.6 7.1 123 28-150 54-199 (498)
248 KOG4332 Predicted sugar transp 96.2 0.01 2.2E-07 58.7 6.0 90 33-123 64-154 (454)
249 COG3104 PTR2 Dipeptide/tripept 96.1 0.17 3.7E-06 54.7 15.7 141 42-182 325-486 (498)
250 PRK03612 spermidine synthase; 96.0 0.6 1.3E-05 52.0 20.2 160 15-178 23-192 (521)
251 PF00854 PTR2: POT family; In 95.9 0.036 7.8E-07 58.8 9.6 104 72-177 2-117 (372)
252 PF02487 CLN3: CLN3 protein; 95.7 0.14 3.1E-06 54.5 12.8 138 9-151 250-392 (402)
253 KOG2615 Permease of the major 95.6 0.22 4.9E-06 52.1 13.1 118 33-150 289-408 (451)
254 TIGR00769 AAA ADP/ATP carrier 95.0 3.1 6.8E-05 45.6 20.7 125 29-153 26-188 (472)
255 PF02487 CLN3: CLN3 protein; 94.9 0.89 1.9E-05 48.5 15.6 135 46-186 64-198 (402)
256 KOG3574 Acetyl-CoA transporter 94.0 2.6 5.6E-05 44.4 16.0 141 8-151 33-190 (510)
257 KOG2563 Permease of the major 94.0 0.23 4.9E-06 53.1 8.6 100 36-135 296-400 (480)
258 KOG3762 Predicted transporter 93.7 0.036 7.9E-07 60.2 2.2 71 13-83 18-88 (618)
259 PF03092 BT1: BT1 family; Int 93.7 0.49 1.1E-05 51.4 11.0 148 38-186 252-415 (433)
260 TIGR00805 oat sodium-independe 90.8 1.3 2.9E-05 50.6 10.3 58 28-85 353-413 (633)
261 PF12832 MFS_1_like: MFS_1 lik 90.3 0.84 1.8E-05 36.7 5.9 58 525-592 8-65 (77)
262 KOG3810 Micronutrient transpor 85.7 1.2 2.7E-05 46.1 5.0 135 54-190 55-189 (433)
263 TIGR00939 2a57 Equilibrative N 85.4 5.9 0.00013 43.1 10.5 108 42-150 308-428 (437)
264 PF06963 FPN1: Ferroportin1 (F 83.6 71 0.0015 34.7 20.7 73 9-81 5-78 (432)
265 KOG1479 Nucleoside transporter 82.7 39 0.00083 36.2 14.8 106 20-127 32-149 (406)
266 TIGR00806 rfc RFC reduced fola 82.4 23 0.00049 39.0 13.2 97 42-138 299-397 (511)
267 TIGR00880 2_A_01_02 Multidrug 81.8 22 0.00047 30.3 11.1 46 41-86 87-132 (141)
268 PF13000 Acatn: Acetyl-coenzym 80.5 5.9 0.00013 43.3 7.8 144 10-153 4-177 (544)
269 KOG1330 Sugar transporter/spin 79.1 6.9 0.00015 42.3 7.8 104 33-136 275-391 (493)
270 PF03219 TLC: TLC ATP/ADP tran 78.9 1.1E+02 0.0024 33.8 18.0 101 53-153 71-203 (491)
271 PF01770 Folate_carrier: Reduc 77.5 59 0.0013 35.0 14.2 96 41-136 285-382 (412)
272 KOG2325 Predicted transporter/ 76.5 7.6 0.00016 42.6 7.3 63 101-165 395-457 (488)
273 KOG0637 Sucrose transporter an 76.1 8.8 0.00019 41.5 7.5 75 43-117 334-408 (498)
274 TIGR00939 2a57 Equilibrative N 75.0 75 0.0016 34.6 14.7 34 93-127 105-138 (437)
275 KOG4332 Predicted sugar transp 71.6 53 0.0012 33.3 11.1 132 42-177 283-425 (454)
276 KOG3880 Predicted small molecu 69.8 15 0.00032 37.8 7.0 140 5-149 250-397 (409)
277 KOG1479 Nucleoside transporter 69.2 25 0.00054 37.6 8.9 108 41-149 282-398 (406)
278 KOG3880 Predicted small molecu 66.4 12 0.00025 38.5 5.5 137 43-185 64-201 (409)
279 PF01733 Nucleoside_tran: Nucl 65.0 2.5 5.5E-05 43.6 0.6 103 46-148 187-302 (309)
280 PF03137 OATP: Organic Anion T 64.2 2.2 4.8E-05 47.7 0.0 78 505-590 290-370 (539)
281 KOG3626 Organic anion transpor 63.0 9.5 0.00021 43.8 4.7 66 515-589 390-456 (735)
282 TIGR01667 YCCS_YHJK integral m 60.1 2E+02 0.0043 33.5 14.7 46 68-113 54-100 (701)
283 KOG3097 Predicted membrane pro 58.2 88 0.0019 32.6 10.1 72 52-124 69-140 (390)
284 COG4262 Predicted spermidine s 57.2 2.6E+02 0.0056 29.6 15.6 85 37-121 39-132 (508)
285 TIGR01666 YCCS hypothetical me 57.0 1.8E+02 0.004 33.7 13.7 44 68-111 54-98 (704)
286 PF12805 FUSC-like: FUSC-like 55.6 2.4E+02 0.0051 28.6 14.0 37 75-111 3-40 (284)
287 TIGR00801 ncs2 uracil-xanthine 54.8 3E+02 0.0066 29.6 16.7 102 32-134 29-134 (415)
288 KOG3810 Micronutrient transpor 52.8 1E+02 0.0022 32.6 9.5 96 42-137 272-369 (433)
289 COG3202 ATP/ADP translocase [E 46.2 4.5E+02 0.0097 29.1 17.6 125 29-153 46-207 (509)
290 COG5336 Uncharacterized protei 42.8 66 0.0014 27.5 5.3 30 44-73 45-75 (116)
291 TIGR00930 2a30 K-Cl cotranspor 38.6 8E+02 0.017 29.8 16.6 13 196-208 554-566 (953)
292 PF07672 MFS_Mycoplasma: Mycop 37.0 33 0.00072 34.4 3.3 57 126-182 2-61 (267)
293 PF06570 DUF1129: Protein of u 32.6 4.5E+02 0.0098 25.1 11.8 18 159-176 174-191 (206)
294 PF07760 DUF1616: Protein of u 31.4 5.6E+02 0.012 26.0 11.3 54 97-153 22-75 (287)
295 PF11947 DUF3464: Protein of u 30.7 1.8E+02 0.004 26.6 6.7 80 63-146 56-146 (153)
296 PF04833 COBRA: COBRA-like pro 30.7 26 0.00057 32.4 1.3 12 413-424 20-31 (169)
297 PF04346 EutH: Ethanolamine ut 30.6 5.7E+02 0.012 26.9 11.0 71 42-113 48-121 (354)
298 PF10225 DUF2215: Uncharacteri 30.5 5.6E+02 0.012 25.5 10.9 7 118-124 56-62 (249)
299 COG3619 Predicted membrane pro 30.4 5.3E+02 0.012 25.3 15.4 67 4-70 10-84 (226)
300 PF04632 FUSC: Fusaric acid re 28.2 9.2E+02 0.02 27.3 17.2 14 178-191 485-498 (650)
301 PF10183 ESSS: ESSS subunit of 27.8 96 0.0021 26.5 4.2 31 157-187 55-85 (105)
302 TIGR00769 AAA ADP/ATP carrier 27.2 8.7E+02 0.019 26.7 19.3 71 102-174 274-345 (472)
303 TIGR00926 2A1704 Peptide:H+ sy 26.2 3.3E+02 0.0071 31.4 9.4 53 95-147 566-618 (654)
304 COG1230 CzcD Co/Zn/Cd efflux s 25.4 7.5E+02 0.016 25.4 16.0 76 2-83 21-99 (296)
305 COG1268 BioY Uncharacterized c 25.3 2.7E+02 0.0058 26.4 7.1 23 48-70 89-111 (184)
306 COG2233 UraA Xanthine/uracil p 25.0 9.3E+02 0.02 26.3 14.4 125 8-134 18-145 (451)
307 PRK03612 spermidine synthase; 22.4 7.8E+02 0.017 27.4 11.3 19 72-90 149-167 (521)
308 PRK07419 1,4-dihydroxy-2-napht 22.2 8.4E+02 0.018 25.1 10.7 14 117-130 134-147 (304)
309 PF00860 Xan_ur_permease: Perm 21.5 6.4E+02 0.014 26.8 10.1 96 34-133 27-129 (389)
310 PF06813 Nodulin-like: Nodulin 21.4 1.8E+02 0.004 29.0 5.4 57 525-592 9-66 (250)
311 PF07672 MFS_Mycoplasma: Mycop 20.2 9E+02 0.02 24.4 10.5 72 42-113 142-223 (267)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.5e-33 Score=296.20 Aligned_cols=212 Identities=34% Similarity=0.550 Sum_probs=184.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHcCC--Cc----hHHHHHHHHHHHHHHHHHhhHHhhhhhc
Q 007702 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIK--------KDLNL--GT----TVEGLVVAMSLIGATAITTCSGPISDWL 68 (592)
Q Consensus 3 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~--------~~~~~--s~----~~~gli~s~~~lg~~ig~~~~G~l~Dr~ 68 (592)
+..+.++.++++.+.+||....+++..+.+. +.++. +. ..++.+++++.+|.++|+++.++++||+
T Consensus 8 ~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~ 87 (485)
T KOG0569|consen 8 RLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRF 87 (485)
T ss_pred HHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4567778888888999999999988766543 33452 22 4578899999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHH
Q 007702 69 GRRPMLILSSVLYFVSGLVMLWS---PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFL 145 (592)
Q Consensus 69 GRK~~li~~~~l~~i~~~~~~~s---~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l 145 (592)
|||..++++.++..++.+++.++ +++.+++++|++.|+..|......+.|+.|++|.+.||....+.+++..+|.++
T Consensus 88 GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll 167 (485)
T KOG0569|consen 88 GRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILL 167 (485)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHH
Confidence 99999999999999998888775 789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhccCChhHHHh-cCcHHHHHHHHHHHhCCCCchHH
Q 007702 146 AYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVS-KGKMLEAKQVLQRLRGREDVSGE 215 (592)
Q Consensus 146 ~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~l~~-~~~~~ea~~~l~~l~~~~~~~~~ 215 (592)
+........+.+...|++.+.+..+++++.+ +.++++||||+||.. |++.+||++.++.+++.+|++.+
T Consensus 168 ~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l-~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~ 237 (485)
T KOG0569|consen 168 GQVLGLPSLLGTEDLWPYLLAFPLIPALLQL-ALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAE 237 (485)
T ss_pred HHHHccHHhcCCCcchHHHHHHHHHHHHHHH-HHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhH
Confidence 9777766677788899999999999888755 567899999999977 89999999999998877765433
No 2
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.98 E-value=1.6e-30 Score=287.54 Aligned_cols=204 Identities=39% Similarity=0.721 Sum_probs=179.6
Q ss_pred hhHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHcCCC---c----hHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHH
Q 007702 3 GAALVAIAATIGNFLQGWD--NATIAGAIVYIKKDLNLG---T----TVEGLVVAMSLIGATAITTCSGPISDWLGRRPM 73 (592)
Q Consensus 3 ~~~~~~~~~~l~~~~~g~~--~~~~~~~~~~i~~~~~~s---~----~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~ 73 (592)
...+..+.+.++.+..|++ .+..+++...+.+..... . .+.+++.+++.+|+.++++++|+++|++|||++
T Consensus 42 ~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~ 121 (513)
T KOG0254|consen 42 FVILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKT 121 (513)
T ss_pred ehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 3466778888899999997 667777777776654321 1 244899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHh
Q 007702 74 LILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (592)
Q Consensus 74 li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~ 153 (592)
++++.+++.++++++++++++.+++++|++.|+|.|+...++++|++|++|++.||...++.+....+|.+++++.....
T Consensus 122 l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~ 201 (513)
T KOG0254|consen 122 LLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGT 201 (513)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997666554
Q ss_pred HhcCCCchhHHHHHHHHHHHHHHHHHHhhccCChhHHHhcCcHHHHHHHHHHHhC
Q 007702 154 SLLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRG 208 (592)
Q Consensus 154 ~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~l~~~~~~~ea~~~l~~l~~ 208 (592)
.... .+||.++++..+++++..+. .+++||||+|+.++|+.+++++.++++++
T Consensus 202 ~~~~-~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g 254 (513)
T KOG0254|consen 202 SKVY-AGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRG 254 (513)
T ss_pred ccCC-ccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhC
Confidence 3332 58999999999999887666 89999999999999999999999998886
No 3
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.93 E-value=4e-29 Score=271.63 Aligned_cols=302 Identities=28% Similarity=0.448 Sum_probs=224.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHcCCCc---------hHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHH
Q 007702 9 IAATIGNFLQGWDNATIAGAIVYIK--KDLNLGT---------TVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILS 77 (592)
Q Consensus 9 ~~~~l~~~~~g~~~~~~~~~~~~i~--~~~~~s~---------~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~ 77 (592)
+++.++.+..|||...++...+... ..+..+. ...+++.+...+|..+|++++|+++||+|||++++++
T Consensus 3 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~ 82 (451)
T PF00083_consen 3 LIASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIIS 82 (451)
T ss_pred EeeHHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccc
Confidence 3456777999999999987776544 2232222 2468899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhc---cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhH
Q 007702 78 SVLYFVSGLVMLWSP---NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMS 154 (592)
Q Consensus 78 ~~l~~i~~~~~~~s~---~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~ 154 (592)
.++.++++++.++++ +++.++++|++.|++.|+..+..++|+.|.+|+++||+..++.+.+..+|.+++..+.....
T Consensus 83 ~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~ 162 (451)
T PF00083_consen 83 ALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVS 162 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999 99999999999999999999999999999999999999999999999999988866554442
Q ss_pred hcC-CCchhHHHHHHHHHHHHHHHHHHhhccCChhHHHhcCcHHHHHHHHHHHhCCCCchHHHHHHHHHHhcccchhhhH
Q 007702 155 LLA-SPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMALLVEGLGIGGETSIEE 233 (592)
Q Consensus 155 ~~~-~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~l~~~~~~~ea~~~l~~l~~~~~~~~~~~~i~~~l~~~~~~~~~~ 233 (592)
... ..+||+.+.+..+++++.+ +..+++||||+|+..|+|.+||++.++++++.+..+.+..+..+.
T Consensus 163 ~~~~~~~Wr~~~~~~~~~~l~~~-~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~----------- 230 (451)
T PF00083_consen 163 YYSDNWGWRILLIFGAIPSLLVL-LLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAE----------- 230 (451)
T ss_pred ccccccccccccccccccccccc-ccccccccccceecccccccccccccccccccccccccccccccc-----------
Confidence 222 3579999999988887644 556889999999999999999999999987775544443322211
Q ss_pred hhhCCCCCCCCCCCCCccccchhhcccc--cceeeeeccccCccccc-----hhhcccccccc-cCcchhhHHHHHhhcc
Q 007702 234 YIIGPGDELADGEEPTDEKDKIRLYGPE--EGLSWVAKPVTGQSSLA-----LVSRQGSLANQ-SVPLMDPLVTLFGSVH 305 (592)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~l~r~~--~~~~~~~~~lsG~~~v~-----~~~~~~~~~~~-~~~~~~~~v~l~gs~~ 305 (592)
.+...+.+.......+..+.+++. .+..+.+++++|.+.+. +....+. .++ ..+....++.+++++.
T Consensus 231 ----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~ 305 (451)
T PF00083_consen 231 ----KKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGI-SNSFLATLILGLVNFLGTLL 305 (451)
T ss_pred ----cccccccceeeeecccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccc
Confidence 000000000111122222223333 66888889899976654 1111111 111 2245555677777777
Q ss_pred c--cCCCCCCccccccCCCCcccc
Q 007702 306 E--KLPESGSMRSTLFPTFGSMFS 327 (592)
Q Consensus 306 ~--~id~~GRr~~~l~~~~gs~~~ 327 (592)
. ++||+|||++++++.+.+...
T Consensus 306 ~~~~~~~~GRr~~~i~~~~~~~~~ 329 (451)
T PF00083_consen 306 AIFLIDRFGRRKLLIIGLLLMAIC 329 (451)
T ss_pred cccccccccccccccccccccccc
Confidence 7 999999999999988885443
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.92 E-value=1.9e-24 Score=238.70 Aligned_cols=206 Identities=21% Similarity=0.285 Sum_probs=174.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHH
Q 007702 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDL-----NLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILS 77 (592)
Q Consensus 3 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~-----~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~ 77 (592)
..+.++++++++.+.++||...++.+.+.+..++ +.+..+.+++.+.+.+|.+++++++|+++||+|||++++++
T Consensus 13 ~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~ 92 (502)
T TIGR00887 13 QHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGME 92 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 4567788899999999999999999999887753 34456778999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcc------HHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHH
Q 007702 78 SVLYFVSGLVMLWSPN------VYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVF 151 (592)
Q Consensus 78 ~~l~~i~~~~~~~s~~------~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~ 151 (592)
.++++++.++++++++ ++.++++|++.|++.|...+..+.|++|++|++.||+.+++.+.+..+|.++++.+..
T Consensus 93 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~ 172 (502)
T TIGR00887 93 LIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVAL 172 (502)
T ss_pred HHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888765 7899999999999999999999999999999999999999999999999888866554
Q ss_pred HhHh---------------------cCCCchhHHHHHHHHHHHHHHHHHHhhccCChhHHHhcCcHH-HHHHHHHHHhCC
Q 007702 152 GMSL---------------------LASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKML-EAKQVLQRLRGR 209 (592)
Q Consensus 152 ~~~~---------------------~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~l~~~~~~~-ea~~~l~~l~~~ 209 (592)
.... ...++||++|.+.++++++. ++.++++||||||+..|+|.+ ++++.++++...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~-~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~ 251 (502)
T TIGR00887 173 IVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLA-LYFRLTIPETPRYTADVAKDVEQAASDMSAVLQV 251 (502)
T ss_pred HHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHH-HHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhcc
Confidence 3211 11247999998888877764 455788999999999888874 577777777653
No 5
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.91 E-value=3.7e-23 Score=234.42 Aligned_cols=208 Identities=22% Similarity=0.286 Sum_probs=185.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHH
Q 007702 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (592)
Q Consensus 3 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~ 82 (592)
..+.++++++++.+..+++...++.++|.+.++++++..+.+++.+++.+|.+++++++|+++||+|||+++++++++.+
T Consensus 164 ~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~ 243 (742)
T TIGR01299 164 FQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNG 243 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 35667788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHh-------
Q 007702 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL------- 155 (592)
Q Consensus 83 i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~------- 155 (592)
+++++++++++++.++++|++.|++.|+..++.+++++|++|++.||+..++.+.+..+|.++++.+......
T Consensus 244 i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~ 323 (742)
T TIGR01299 244 FFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQ 323 (742)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhc
Confidence 9999999999999999999999999999999999999999999999999999999999998888655433221
Q ss_pred ----cCCCchhHHHHHHHHHHHHHHHHHHhhccCChhHHHhcCcHHHHHHHHHHHhCCCC
Q 007702 156 ----LASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGRED 211 (592)
Q Consensus 156 ----~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~l~~~~~~~ea~~~l~~l~~~~~ 211 (592)
....+||+++++.+++.++ .++.++++||||+|+..+++.++|.+.+++++..+.
T Consensus 324 ~g~~~~~~gWR~l~~i~~lp~ll-~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~ 382 (742)
T TIGR01299 324 MGSAYQFHSWRVFVIVCAFPCVF-AIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNM 382 (742)
T ss_pred cccccccccHHHHHHHHHHHHHH-HHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCC
Confidence 1234799999888877665 456678899999999999999999999999987653
No 6
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.91 E-value=5.4e-24 Score=233.10 Aligned_cols=206 Identities=35% Similarity=0.647 Sum_probs=177.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------CCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHH
Q 007702 5 ALVAIAATIGNFLQGWDNATIAGAIVYIKKDL--------NLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLIL 76 (592)
Q Consensus 5 ~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~--------~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~ 76 (592)
...+++++++.+..+|+...+++..+.+++.| +.+..+.+++.+++.++.+++++++|+++||+|||+++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~ 90 (479)
T PRK10077 11 FSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKI 90 (479)
T ss_pred HHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 56777888899999999999999999999988 7788899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhh------------ccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHH
Q 007702 77 SSVLYFVSGLVMLWS------------PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMF 144 (592)
Q Consensus 77 ~~~l~~i~~~~~~~s------------~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~ 144 (592)
+.++++++.+.++++ +.++.++++|+++|++.|...+..+.+++|++|+++||+.+++.+.+..+|.+
T Consensus 91 ~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~ 170 (479)
T PRK10077 91 AAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQL 170 (479)
T ss_pred HHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHH
Confidence 999999988877763 23567889999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHhH------hcCCCchhHHHHHHHHHHHHHHHHHHhhccCChhHHHhcCcHHHHHHHHHHHhCCCC
Q 007702 145 LAYCMVFGMS------LLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGRED 211 (592)
Q Consensus 145 l~~~~~~~~~------~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~l~~~~~~~ea~~~l~~l~~~~~ 211 (592)
++++...... .....+||++|++.+++.++.. +..+++||+|+|+..+++.+++++.++++.+.++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~-~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~ 242 (479)
T PRK10077 171 VVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFL-MLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTL 242 (479)
T ss_pred HHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHH-HHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChh
Confidence 8865543322 1245699999998888777754 4567899999999888888888888887765543
No 7
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.88 E-value=1.4e-21 Score=215.16 Aligned_cols=187 Identities=19% Similarity=0.264 Sum_probs=155.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchH-HHH-----HHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHH
Q 007702 6 LVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTV-EGL-----VVAMSLIGATAITTCSGPISDWLGRRPMLILSSV 79 (592)
Q Consensus 6 ~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~-~gl-----i~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~ 79 (592)
..++.+++++++.+||...++...|.+.++|+.+.+. ..+ +.++.+++..+|+++.|+++||+|||++++++.+
T Consensus 16 ~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~ 95 (490)
T PRK10642 16 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIV 95 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 4566778899999999999999999999999754321 122 2477889999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccHHH--------HHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHH
Q 007702 80 LYFVSGLVMLWSPNVYV--------LCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVF 151 (592)
Q Consensus 80 l~~i~~~~~~~s~~~~~--------ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~ 151 (592)
+++++++++++++++.. ++++|+++|++.|+.++....+++|++|+++||+..++.+.+..+|..++..+..
T Consensus 96 l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~ 175 (490)
T PRK10642 96 IMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVV 175 (490)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999864 8899999999999999999999999999999999999999888888887754432
Q ss_pred HhH--h----cCCCchhHHHHHHHHHHHHHHHHHHhhccCChhHHHhc
Q 007702 152 GMS--L----LASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSK 193 (592)
Q Consensus 152 ~~~--~----~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~l~~~ 193 (592)
... . ....+||++|++.+++.++ .++..+.+||||+|...+
T Consensus 176 ~~~~~~~~~~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~esp~~~~~~ 222 (490)
T PRK10642 176 LISTIVGEANFLDWGWRIPFFIALPLGII-GLYLRHALEETPAFQQHV 222 (490)
T ss_pred HHHHhcCHHHhcCccHHHHHHHHHHHHHH-HHHHHHcCCCChhHHHHH
Confidence 221 1 2357999999887765554 444567899999986543
No 8
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.86 E-value=2.7e-20 Score=193.99 Aligned_cols=228 Identities=23% Similarity=0.260 Sum_probs=195.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHH
Q 007702 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLY 81 (592)
Q Consensus 2 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~ 81 (592)
++.+..++.+.++.|..+....++.+.+|.+.+++|++....|+.++.|.++..+++++...+.||+.||+.++....++
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lF 88 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALF 88 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH
Confidence 35577888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCch
Q 007702 82 FVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSW 161 (592)
Q Consensus 82 ~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~W 161 (592)
+++++++++++||+.++++|++.|++.|.+++....+.+++.|+++|++++++...+.++..+++ ..++..+.+..||
T Consensus 89 i~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~G--vPLGt~ig~~~GW 166 (394)
T COG2814 89 IVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLG--VPLGTFLGQLFGW 166 (394)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHh--ccHHHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999998 7778888889999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCChhHHHhcCcHHHHHHHHHHHhCCCCchHHHHHHHHHHhcccchhhhHhhhC
Q 007702 162 RLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMALLVEGLGIGGETSIEEYIIG 237 (592)
Q Consensus 162 r~~f~i~~i~~~~~~~l~~~~~pEsP~~l~~~~~~~ea~~~l~~l~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~ 237 (592)
|..|++.++++++.++..+..+| |+.. .+.+..+.++.++.+++.. .....+...+..++....++|+.-
T Consensus 167 R~~F~~ia~l~ll~~~~~~~~lP--~~~~-~~~~~~~~~~~~~~l~~p~---v~~~l~~t~l~~~g~F~~ftYi~P 236 (394)
T COG2814 167 RATFLAIAVLALLALLLLWKLLP--PSEI-SGSLPGPLRTLLRLLRRPG---VLLGLLATFLFMTGHFALYTYIRP 236 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC--CccC-CCCCCcchhHHHHHhcCch---HHHHHHHHHHHHcchhhhHHhHHH
Confidence 99999999999998888889999 2211 1112223333444444333 233445555667777788877653
No 9
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.85 E-value=1.5e-20 Score=203.96 Aligned_cols=208 Identities=38% Similarity=0.664 Sum_probs=175.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--------chHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHH
Q 007702 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLG--------TTVEGLVVAMSLIGATAITTCSGPISDWLGRRPML 74 (592)
Q Consensus 3 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s--------~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~l 74 (592)
+.+...+.+.++.++.+++...+++.++.+..+++.+ ..+.+++.+++.++..++.+++|+++||+|||+++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~ 104 (481)
T TIGR00879 25 KVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSL 104 (481)
T ss_pred HHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHH
Confidence 4456666777788899999999999999988888877 78999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHH-
Q 007702 75 ILSSVLYFVSGLVMLWS---PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV- 150 (592)
Q Consensus 75 i~~~~l~~i~~~~~~~s---~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~- 150 (592)
+++.++..++.++..+. .+++.++++|++.|++.+...+....+++|++|+++|++.+++.+.+..+|.++++.+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~ 184 (481)
T TIGR00879 105 LIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGS 184 (481)
T ss_pred HHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999998888654 34568999999999999999999999999999999999999999999999999996665
Q ss_pred HHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhccCChhHHHhcCcHHHHHHHHHHHhCCCC
Q 007702 151 FGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGRED 211 (592)
Q Consensus 151 ~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~l~~~~~~~ea~~~l~~l~~~~~ 211 (592)
.........+||++|++.++..++ .++..+++||+|+++..+++.+++.+.+++....++
T Consensus 185 ~~~~~~~~~~w~~~f~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (481)
T TIGR00879 185 GKVSLNNTLGWRIPLGLQLIPAGL-LFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSG 244 (481)
T ss_pred HhhcCCCCccHHHHHHHHHHHHHH-HHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCC
Confidence 113344567999999986655554 445677899999998877777777777766655443
No 10
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.85 E-value=5.6e-20 Score=197.98 Aligned_cols=185 Identities=20% Similarity=0.197 Sum_probs=167.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHH
Q 007702 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (592)
Q Consensus 4 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i 83 (592)
.+..++.++++++.+++|...++.+.|.+++++|++.++.+++.+++.+++.+++++.|+++||+|||+++.++.+++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 85 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGI 85 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHH
Confidence 57788888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHh----cCCC
Q 007702 84 SGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL----LASP 159 (592)
Q Consensus 84 ~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~----~~~~ 159 (592)
++++++++++++.+++.|++.|++.+...+....+++|++|+++|++.+++.+.+..+|..+++........ .+..
T Consensus 86 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~ 165 (412)
T TIGR02332 86 ASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALK 165 (412)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999888655433221 1346
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhccCChh
Q 007702 160 SWRLMLGVLSIPALLYFAFAVFFLPESPR 188 (592)
Q Consensus 160 ~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~ 188 (592)
+||+.|.+.+++.++..++.++++||+|+
T Consensus 166 gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 166 GWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred chhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 99999999888887777777788999985
No 11
>TIGR00898 2A0119 cation transport protein.
Probab=99.85 E-value=1.3e-21 Score=215.86 Aligned_cols=179 Identities=31% Similarity=0.489 Sum_probs=159.2
Q ss_pred HHHHHHHHHcCCC---chHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHH
Q 007702 27 GAIVYIKKDLNLG---TTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLL 103 (592)
Q Consensus 27 ~~~~~i~~~~~~s---~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l 103 (592)
+..+.+.+||+++ ..+.+++.+++.+|.++++++.|+++||+|||++++++.++.+++.++.+++++++.+++.|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 3456788899998 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhc
Q 007702 104 DGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFL 183 (592)
Q Consensus 104 ~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~ 183 (592)
.|++.+...+...+++.|++|+++|+...++.+.+..+|.++++.+.... .+||+.+++.+++.++.+++ .+++
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~~wr~~~~~~~i~~~~~~~~-~~~~ 263 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI-----PDWRWLQLAVSLPTFLFFLL-SWFV 263 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHH-HHhc
Confidence 99999999999999999999999999999999999999988875544322 14999999998888775544 5889
Q ss_pred cCChhHHHhcCcHHHHHHHHHHHhCCCC
Q 007702 184 PESPRWLVSKGKMLEAKQVLQRLRGRED 211 (592)
Q Consensus 184 pEsP~~l~~~~~~~ea~~~l~~l~~~~~ 211 (592)
||+|+|+..+++.+++.+.+++..+.+.
T Consensus 264 ~esp~~l~~~~~~~~a~~~l~~~~~~~~ 291 (505)
T TIGR00898 264 PESPRWLISQGRIEEALKILQRIAKING 291 (505)
T ss_pred CCChHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 9999999999999999999888775543
No 12
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.83 E-value=2.1e-20 Score=207.39 Aligned_cols=171 Identities=30% Similarity=0.520 Sum_probs=148.8
Q ss_pred HHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhh
Q 007702 34 KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVT 113 (592)
Q Consensus 34 ~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~ 113 (592)
+.++.+.....+..+++++|.++|++++|+++|++|||++++++.++.+++.++.++++|++.+++.|+++|++.++..+
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 44555668889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhccCChhHHHhc
Q 007702 114 LVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSK 193 (592)
Q Consensus 114 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~l~~~ 193 (592)
++.++++|+.++++|+...++.......|.+..++..+.. . +||+.+++..+++++.+++ +++.||||||+..+
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~~~~~~~~~~~~~~~~a~~~---~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~ 264 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTLGGFFFVGGLMLPAGAAYIT---R--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSK 264 (521)
T ss_pred HhHhhheeecCcchhhHHHHHHHHHHHHHHHHHHHHHHHH---h--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHc
Confidence 9999999999999999999995555555555443333222 1 9999999999999876554 67777999999999
Q ss_pred CcHHHHHHHHHHHhCCC
Q 007702 194 GKMLEAKQVLQRLRGRE 210 (592)
Q Consensus 194 ~~~~ea~~~l~~l~~~~ 210 (592)
++.+++.+.+++..+.+
T Consensus 265 g~~~~a~~~l~~~a~~n 281 (521)
T KOG0255|consen 265 GRIDEAIKILKKIAKLN 281 (521)
T ss_pred CchHHHHHHHHHHHhhc
Confidence 99999999999987644
No 13
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.82 E-value=1.5e-18 Score=184.81 Aligned_cols=188 Identities=21% Similarity=0.252 Sum_probs=164.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHH
Q 007702 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (592)
Q Consensus 3 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~ 82 (592)
+.+.....+.++++..+++...+++..|.++++++++..+.+++.+++.++..++.++.|.++||+|||++++++.++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~ 88 (405)
T TIGR00891 9 AQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFS 88 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 55777889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchh
Q 007702 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (592)
Q Consensus 83 i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr 162 (592)
++++++.++++++.+++.|++.|++.+...+....++.|++|+++|++.+++.+.+..+|..+++.+..........+||
T Consensus 89 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~ 168 (405)
T TIGR00891 89 AGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWR 168 (405)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHH
Confidence 99999999999999999999999999999999999999999999999999999999999998886544333222223599
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCChhHHH
Q 007702 163 LMLGVLSIPALLYFAFAVFFLPESPRWLV 191 (592)
Q Consensus 163 ~~f~i~~i~~~~~~~l~~~~~pEsP~~l~ 191 (592)
+.|.+.+++.++ .++..+.+||+|++..
T Consensus 169 ~~f~~~~~~~~~-~~~~~~~~~~~~~~~~ 196 (405)
T TIGR00891 169 ALFFISILPIIF-ALWLRKNIPEAEDWKE 196 (405)
T ss_pred HHHHHHHHHHHH-HHHHHHhCCCChhHHH
Confidence 999876665554 4455677899887653
No 14
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.82 E-value=2.7e-18 Score=183.97 Aligned_cols=189 Identities=24% Similarity=0.307 Sum_probs=169.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHH
Q 007702 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLY 81 (592)
Q Consensus 2 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~ 81 (592)
++.+..++.+++..+.++++....+...|.+.++++.+..+.+++.+.+.++..+++++.|+++||+|||++++.+.++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 90 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALF 90 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 35677888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCch
Q 007702 82 FVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSW 161 (592)
Q Consensus 82 ~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~W 161 (592)
.++.+++.++++++.+++.|++.|++.+...+....++.|++|+++|++.+++.+.+..+|..+++.+ .....+..+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~ 168 (406)
T PRK11551 91 GLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVI--GVLAAGDAAW 168 (406)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHccccCH
Confidence 99999999999999999999999999999999999999999999999999999999999999888544 3344566789
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCChhHHHh
Q 007702 162 RLMLGVLSIPALLYFAFAVFFLPESPRWLVS 192 (592)
Q Consensus 162 r~~f~i~~i~~~~~~~l~~~~~pEsP~~l~~ 192 (592)
|++|++.+++.++.+++..+++||+|++...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 199 (406)
T PRK11551 169 RHIFYVGGVGPLLLVPLLMRWLPESRAFAQA 199 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChhHHhc
Confidence 9999988877766666667788999887543
No 15
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.82 E-value=9.1e-19 Score=188.82 Aligned_cols=183 Identities=23% Similarity=0.314 Sum_probs=159.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHH
Q 007702 5 ALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVS 84 (592)
Q Consensus 5 ~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~ 84 (592)
...++.+.++++..+++.....+..|.+++++|++..+.+++.+++.++..+++++.|+++||+|||++++++.++.+++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~ 96 (426)
T PRK12307 17 KNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVG 96 (426)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 45567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHH
Q 007702 85 GLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLM 164 (592)
Q Consensus 85 ~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~ 164 (592)
.++++++++++.++++|++.|++.|..++....++.|++|+++|++.+++.+.+..+|.++++.+ .....+..+||++
T Consensus 97 ~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l--~~~l~~~~~w~~~ 174 (426)
T PRK12307 97 TGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYF--MPSFAEAYGWRAA 174 (426)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHH--HHHHcccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999887433 3344566799999
Q ss_pred HHHHHHHHHHHHHHHHhhccCChhHH
Q 007702 165 LGVLSIPALLYFAFAVFFLPESPRWL 190 (592)
Q Consensus 165 f~i~~i~~~~~~~l~~~~~pEsP~~l 190 (592)
|++..++.++ .++.....||++++.
T Consensus 175 f~i~~~~~~~-~~~~~~~~p~~~~~~ 199 (426)
T PRK12307 175 FFVGLLPVLL-VIYIRARAPESKEWE 199 (426)
T ss_pred HHHHHHHHHH-HHHHHHHCCCChHHH
Confidence 9875544333 333344568877653
No 16
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.81 E-value=2.6e-18 Score=186.16 Aligned_cols=187 Identities=22% Similarity=0.247 Sum_probs=152.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CCchHH---HHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHH
Q 007702 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLN---LGTTVE---GLVVAMSLIGATAITTCSGPISDWLGRRPMLIL 76 (592)
Q Consensus 3 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~---~s~~~~---gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~ 76 (592)
+.+..++.++++++++++|...++.+.|.+.++++ .+..+. +.+.+...++..+|++++|+++||+|||+++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 44566777889999999999999999999999985 344433 334455556666999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccHH--------HHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHH
Q 007702 77 SSVLYFVSGLVMLWSPNVY--------VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYC 148 (592)
Q Consensus 77 ~~~l~~i~~~~~~~s~~~~--------~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 148 (592)
+.++++++++++++++++. .+++.|+++|++.|..++....+++|++|+++||+..++.+.+..+|.+++..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988764 58899999999999999999999999999999999999988888888887754
Q ss_pred HHHHhHh------cCCCchhHHHHHHHHHHHHHHHHHHhhccCChhHH
Q 007702 149 MVFGMSL------LASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWL 190 (592)
Q Consensus 149 ~~~~~~~------~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~l 190 (592)
....... ....+||++|++.+++.++. ++....+||+|++.
T Consensus 179 ~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~-~~~~~~~~e~~~~~ 225 (432)
T PRK10406 179 VVVVLQQTLEDAELREWGWRIPFALGAVLAVVA-LWLRRQLDETSQQE 225 (432)
T ss_pred HHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH-HHHHhcCCCCchHH
Confidence 4322211 13579999999888877664 34466789998763
No 17
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.81 E-value=1.7e-18 Score=190.82 Aligned_cols=186 Identities=17% Similarity=0.186 Sum_probs=168.7
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHH
Q 007702 1 MNGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVL 80 (592)
Q Consensus 1 m~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l 80 (592)
|.|.+..++.++++.++...|..+++.++|.+.+++|.+.++.+|+.+.+.++..++.++.|+++||+|||++++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~ 80 (495)
T PRK14995 1 MFRQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTL 80 (495)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 67888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhc-CccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCC
Q 007702 81 YFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETA-PSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASP 159 (592)
Q Consensus 81 ~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~-p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~ 159 (592)
+.+++++++++++++.++++|+++|++.+...+.....+.+.+ |+++|++.+++......+|..++ +..+..+.+..
T Consensus 81 ~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~g--p~lgg~l~~~~ 158 (495)
T PRK14995 81 FGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFG--PLVGGILLEHF 158 (495)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhhccC
Confidence 9999999999999999999999999999998888877776665 67999999999999999999998 44556666778
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhccCChh
Q 007702 160 SWRLMLGVLSIPALLYFAFAVFFLPESPR 188 (592)
Q Consensus 160 ~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~ 188 (592)
+||++|++...+.++.+++..+++||.|.
T Consensus 159 gwr~~f~i~~~~~~~~~~l~~~~l~~~~~ 187 (495)
T PRK14995 159 YWGSVFLINVPIVLVVMGLTARYVPRQAG 187 (495)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999998877777766677778888753
No 18
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.81 E-value=8.4e-20 Score=183.37 Aligned_cols=204 Identities=23% Similarity=0.288 Sum_probs=177.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHH
Q 007702 5 ALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVS 84 (592)
Q Consensus 5 ~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~ 84 (592)
+.....+..+++-...-.-..+.+.|.....++++..+..++....+.|..+++..+|.++|++|||+.+.+..+..++.
T Consensus 77 ~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~ 156 (528)
T KOG0253|consen 77 WYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVF 156 (528)
T ss_pred hhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHH
Confidence 45566667777766666666667778888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHH
Q 007702 85 GLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLM 164 (592)
Q Consensus 85 ~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~ 164 (592)
.++.+.+||+..+++.|.+.|+|.|+ .|...++-.|..|..+|+..+.+. +.+.+|.++..++.++. ....||||.
T Consensus 157 ~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~v--m~~~gwr~~ 232 (528)
T KOG0253|consen 157 GVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGV--MSNFGWRYL 232 (528)
T ss_pred HHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHH--HHhhhHHHH
Confidence 99999999999999999999999999 788888899999999999988887 88999999886665543 345599999
Q ss_pred HHHHHHHHHHHHHHHHhhccCChhHHHhcCcHHHHHHHHHHHhCCCCch
Q 007702 165 LGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVS 213 (592)
Q Consensus 165 f~i~~i~~~~~~~l~~~~~pEsP~~l~~~~~~~ea~~~l~~l~~~~~~~ 213 (592)
....+.|..+ +....+++||||||+..+|+.++|.+.++++.+.|...
T Consensus 233 l~~~~~pl~~-~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~q 280 (528)
T KOG0253|consen 233 LFTSSTPLMF-AARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQ 280 (528)
T ss_pred HHHHHhHHHH-HHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCC
Confidence 8888866655 44667899999999999999999999999998877544
No 19
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.80 E-value=3.4e-18 Score=181.24 Aligned_cols=167 Identities=17% Similarity=0.115 Sum_probs=140.2
Q ss_pred HHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Q 007702 21 DNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIA 100 (592)
Q Consensus 21 ~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~ 100 (592)
....+++.+|.+++++|++..+.+++.+.+.+++.+++++.|+++||+|||++++.+.+....+.+.....++++.+++.
T Consensus 6 ~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (368)
T TIGR00903 6 IWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLAC 85 (368)
T ss_pred HHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 35667889999999999999999999999999999999999999999999998766555554544333334799999999
Q ss_pred HHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHH
Q 007702 101 RLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAV 180 (592)
Q Consensus 101 R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~ 180 (592)
|+++|++.+. .......++|++|+++|++++++.+.+..+|..+++.+. ..+.+..+||+.|++.++++++..++.+
T Consensus 86 R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~--~~l~~~~gWr~~f~~~~~l~~~~~~~~~ 162 (368)
T TIGR00903 86 QLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAG--LKIYTAGGLQLLIIPIAAVAAAGIILVL 162 (368)
T ss_pred HHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHccchHHHHHHHHHHHHHHHHHHH
Confidence 9999999986 455666679999999999999999999999999995443 4444577999999998888888777788
Q ss_pred hhccCChhHH
Q 007702 181 FFLPESPRWL 190 (592)
Q Consensus 181 ~~~pEsP~~l 190 (592)
+++||+|++.
T Consensus 163 ~~lp~~p~~~ 172 (368)
T TIGR00903 163 AALPALPFQA 172 (368)
T ss_pred HHcCCCCCCC
Confidence 8999999863
No 20
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.79 E-value=5.2e-20 Score=191.25 Aligned_cols=187 Identities=18% Similarity=0.264 Sum_probs=171.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHH
Q 007702 1 MNGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVL 80 (592)
Q Consensus 1 m~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l 80 (592)
|++..+.++++++.++++..|..++...++.++..||++++..|++.+++.+..++.+|++|+++|||+||+++.++..+
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~i 107 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFI 107 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHH
Confidence 45667888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCc
Q 007702 81 YFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS 160 (592)
Q Consensus 81 ~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~ 160 (592)
+.++.+.++++..+|+++++|-+.|+|.+.+.++++.+++|.+|..+|++..++++++..+|..+|++..-...-.+ ..
T Consensus 108 W~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~-~~ 186 (493)
T KOG1330|consen 108 WTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT-FW 186 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc-cc
Confidence 99999999999999999999999999999999999999999999999999999999999999998865443222222 23
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccCChh
Q 007702 161 WRLMLGVLSIPALLYFAFAVFFLPESPR 188 (592)
Q Consensus 161 Wr~~f~i~~i~~~~~~~l~~~~~pEsP~ 188 (592)
|||.|...+++++++.++..++.+|.+|
T Consensus 187 Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 187 WRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred eEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 9999999999999999999999999865
No 21
>PRK09952 shikimate transporter; Provisional
Probab=99.79 E-value=8.7e-18 Score=182.40 Aligned_cols=187 Identities=18% Similarity=0.226 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHc--CCCchHHHHHH-----HHHHHHHHHHHhhHHhhhhhcCchHHHHH
Q 007702 5 ALVAIAATIGNFLQGWDNATIAGAIVY-IKKDL--NLGTTVEGLVV-----AMSLIGATAITTCSGPISDWLGRRPMLIL 76 (592)
Q Consensus 5 ~~~~~~~~l~~~~~g~~~~~~~~~~~~-i~~~~--~~s~~~~gli~-----s~~~lg~~ig~~~~G~l~Dr~GRK~~li~ 76 (592)
......+.++++.++||...++...+. +.+++ +.++. .+++. ++.+++..+|+++.|+++||+|||+++++
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~ 99 (438)
T PRK09952 21 RRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLML 99 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHH
Confidence 346677888999999999999987764 56666 66665 45543 34556778999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccHH--------HHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHH
Q 007702 77 SSVLYFVSGLVMLWSPNVY--------VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYC 148 (592)
Q Consensus 77 ~~~l~~i~~~~~~~s~~~~--------~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 148 (592)
+.++++++++++++++++. .++++|+++|++.|..++....+++|++|+++||+..+..+.+..+|.+++..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~ 179 (438)
T PRK09952 100 TVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTG 179 (438)
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987 58889999999999999999999999999999999999999999999888754
Q ss_pred HHHHhHh------cCCCchhHHHHHHHHHHHHHHHHHHhhccCChhHHHhc
Q 007702 149 MVFGMSL------LASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSK 193 (592)
Q Consensus 149 ~~~~~~~------~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~l~~~ 193 (592)
+...... ....+||++|++.+++.++ .++....+||+|+|...+
T Consensus 180 ~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~-~~~l~~~~~es~~~~~~~ 229 (438)
T PRK09952 180 LVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI-ALWVRNGMEESAEFEQQQ 229 (438)
T ss_pred HHHHHHHhCCHHHhhccChHHHHHHHHHHHHH-HHHHHHhCCCChhHHHHH
Confidence 4322211 1357999999888777654 334456789999886443
No 22
>PRK03545 putative arabinose transporter; Provisional
Probab=99.79 E-value=9e-18 Score=179.25 Aligned_cols=184 Identities=18% Similarity=0.196 Sum_probs=158.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHH
Q 007702 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (592)
Q Consensus 3 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~ 82 (592)
+.+..++.+.++.+..........+.+|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++..
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 85 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFI 85 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 34555666666666666666666677899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchh
Q 007702 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (592)
Q Consensus 83 i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr 162 (592)
++++++.++++++.++++|+++|++.+...+....++.|++|+++|++.+++.+.+..+|..+++.. .....+..+||
T Consensus 86 ~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l--~~~l~~~~gw~ 163 (390)
T PRK03545 86 ASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPL--GRVIGQYLGWR 163 (390)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhH--HHHHHHHhcHH
Confidence 9999999999999999999999999999989999999999999999999999999999999888443 33444567999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCChh
Q 007702 163 LMLGVLSIPALLYFAFAVFFLPESPR 188 (592)
Q Consensus 163 ~~f~i~~i~~~~~~~l~~~~~pEsP~ 188 (592)
++|++.+++.++..++.++++||.|+
T Consensus 164 ~~f~~~~~~~~l~~~~~~~~~~~~~~ 189 (390)
T PRK03545 164 TTFLAIGGGALITLLLLIKLLPLLPS 189 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999988887766666666787653
No 23
>PRK15075 citrate-proton symporter; Provisional
Probab=99.78 E-value=4.2e-18 Score=184.62 Aligned_cols=185 Identities=19% Similarity=0.262 Sum_probs=145.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHH-HHHHHHH-----HHHHHHHhhHHhhhhhcCchHHHHHH
Q 007702 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEG-LVVAMSL-----IGATAITTCSGPISDWLGRRPMLILS 77 (592)
Q Consensus 4 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~g-li~s~~~-----lg~~ig~~~~G~l~Dr~GRK~~li~~ 77 (592)
++.....++++.+++++|...++.+.|.++++++.+..+.+ +..+... ++..+++++.|+++||+|||++++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 44578889999999999999999999999999998775543 3333322 23347889999999999999999999
Q ss_pred HHHHHHHHHHHHhhccHH--------HHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHH
Q 007702 78 SVLYFVSGLVMLWSPNVY--------VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCM 149 (592)
Q Consensus 78 ~~l~~i~~~~~~~s~~~~--------~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~ 149 (592)
.+++.+++++++++++++ .++++|+++|++.|...+....+++|++|+++|++.+++.+....+|..+++.+
T Consensus 93 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~ 172 (434)
T PRK15075 93 LSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALL 172 (434)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999877 468899999999999999999999999999999999999888777777666444
Q ss_pred HHHhH------hcCCCchhHHHHHHHHHHHHHHHHHHhhccCChhH
Q 007702 150 VFGMS------LLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRW 189 (592)
Q Consensus 150 ~~~~~------~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~ 189 (592)
..... ..+..+||++|++..++..+ ..+.....||++.+
T Consensus 173 g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~-~~~~~~~~~e~~~~ 217 (434)
T PRK15075 173 GYLLNQWLSPAQMAEWGWRIPFLIGCLIVPF-IFLIRRSLEETEEF 217 (434)
T ss_pred HHHHHHhCCHHHHhccchHHHHHHHHHHHHH-HHHHHHhcCCCHHH
Confidence 33321 12467999999875544322 22334456676544
No 24
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.78 E-value=6.4e-19 Score=185.91 Aligned_cols=172 Identities=19% Similarity=0.191 Sum_probs=153.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccH
Q 007702 15 NFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNV 94 (592)
Q Consensus 15 ~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~ 94 (592)
++...++...++...|.+.+++|++..+.+++.+++.++..++.++.|+++||+|||++++++.++..++.+++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 82 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAY 82 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCH
Confidence 45667788888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHH
Q 007702 95 YVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALL 174 (592)
Q Consensus 95 ~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~ 174 (592)
+.++++|++.|++.+...+....++.|++|+++|++.+++.+....+|..+++.+. ....+..+||++|++.+++.++
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~ 160 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLV--GWILIHFSWQWAFIIEGVLGII 160 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHH--HHHHHhCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999885443 3344566899999988888777
Q ss_pred HHHHHHhhccCChh
Q 007702 175 YFAFAVFFLPESPR 188 (592)
Q Consensus 175 ~~~l~~~~~pEsP~ 188 (592)
..++.+++.||+|+
T Consensus 161 ~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 161 WGVLWLKFIPDPPQ 174 (399)
T ss_pred HHHHhhheecCCCC
Confidence 66666677787754
No 25
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.78 E-value=4.9e-18 Score=178.55 Aligned_cols=176 Identities=19% Similarity=0.201 Sum_probs=147.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHH
Q 007702 9 IAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM 88 (592)
Q Consensus 9 ~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~ 88 (592)
+...+..+..+. ....++..|.+.+++|++..+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.+++
T Consensus 7 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~ 85 (377)
T TIGR00890 7 VGTVIMCFTSGY-VYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFY 85 (377)
T ss_pred HHHHHHHHHhhH-HhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHH
Confidence 333344444444 4467788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHH
Q 007702 89 LWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVL 168 (592)
Q Consensus 89 ~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~ 168 (592)
+++++++.++++|++.|++.+..++....++.|++| ++|++..++...+..+|..++... .....+..+||+.|++.
T Consensus 86 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~f~~~ 162 (377)
T TIGR00890 86 AIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPL--ITSVINLEGVPAAFIYM 162 (377)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHH--HHHHHhcccHHHHHHHH
Confidence 999999999999999999999988888888999987 579999999999988887765322 22333456999999998
Q ss_pred HHHHHHHHHHHHhhccCChh
Q 007702 169 SIPALLYFAFAVFFLPESPR 188 (592)
Q Consensus 169 ~i~~~~~~~l~~~~~pEsP~ 188 (592)
+++.++..++.++++++.|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~ 182 (377)
T TIGR00890 163 GIIFLLVIVLGAFLIGYPPG 182 (377)
T ss_pred HHHHHHHHHHHHHheecCch
Confidence 88887776666667766543
No 26
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.77 E-value=2.4e-17 Score=177.60 Aligned_cols=181 Identities=19% Similarity=0.326 Sum_probs=157.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHH
Q 007702 6 LVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG 85 (592)
Q Consensus 6 ~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~ 85 (592)
.....+.+..+....+...+.+.+|.+.++++.+....++..+++.++.+++.++.|+++||+|||++++++.+++++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 95 (413)
T PRK15403 16 FFPMALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLAC 95 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHH
Confidence 34445566666677788888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHH
Q 007702 86 LVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLML 165 (592)
Q Consensus 86 ~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f 165 (592)
+++.++++++.++++|+++|++.+...+....++.|.+|+++|++.+++......+|..+++.+. ..+.+..+||+.|
T Consensus 96 ~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg--~~l~~~~gw~~~f 173 (413)
T PRK15403 96 AATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSG--AALMHFVHWKVLF 173 (413)
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhcCHHHHH
Confidence 99999999999999999999999877777788999999999999999999999889988885443 3344567999999
Q ss_pred HHHHHHHHHHHHHHHhhccCChh
Q 007702 166 GVLSIPALLYFAFAVFFLPESPR 188 (592)
Q Consensus 166 ~i~~i~~~~~~~l~~~~~pEsP~ 188 (592)
++.+++.++.+++.++++||+++
T Consensus 174 ~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 174 AIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHHHHHHHhCCCCcc
Confidence 99888877766665677899854
No 27
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.77 E-value=2.7e-17 Score=176.04 Aligned_cols=185 Identities=16% Similarity=0.119 Sum_probs=160.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHH
Q 007702 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLY 81 (592)
Q Consensus 2 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~ 81 (592)
|+.+...+.+.++.+..........+.+|.+.+++|++..+.++..+++.++..++.++.|+++||+|||++++.+.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~ 95 (394)
T PRK10213 16 RPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLL 95 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHH
Confidence 34566666777777777777667777888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCch
Q 007702 82 FVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSW 161 (592)
Q Consensus 82 ~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~W 161 (592)
+++.+++.++++++.+++.|++.|++.|...+....++.|++|+++|++.+++......+|..+++. .+..+.+..+|
T Consensus 96 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~--l~~~l~~~~gw 173 (394)
T PRK10213 96 TLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAP--LGSFLGELIGW 173 (394)
T ss_pred HHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhhcCH
Confidence 9999999999999999999999999999999999999999999999999999999999999988844 44455566799
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCChh
Q 007702 162 RLMLGVLSIPALLYFAFAVFFLPESPR 188 (592)
Q Consensus 162 r~~f~i~~i~~~~~~~l~~~~~pEsP~ 188 (592)
|+.|++.++++++..++.+..+||+|.
T Consensus 174 ~~~f~~~~~l~~~~~l~~~~~~p~~~~ 200 (394)
T PRK10213 174 RNVFNAAAVMGVLCIFWIIKSLPSLPG 200 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCc
Confidence 999998887776655555556788753
No 28
>TIGR00895 2A0115 benzoate transport.
Probab=99.77 E-value=2.4e-17 Score=174.72 Aligned_cols=188 Identities=29% Similarity=0.361 Sum_probs=166.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHH
Q 007702 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (592)
Q Consensus 4 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i 83 (592)
.+...+.+.+..+..+++...++...|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||++++.+.++..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 94 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSV 94 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHH
Confidence 44566667778888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhH
Q 007702 84 SGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRL 163 (592)
Q Consensus 84 ~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~ 163 (592)
+.+++.++++++.+++.|++.|++.+...+....++.|.+|+++|++.+++.+.+..+|..+++.. .....+..+|++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~--~~~l~~~~g~~~ 172 (398)
T TIGR00895 95 FTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFL--AGWLIPVFGWRS 172 (398)
T ss_pred HHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHH--HHHHhhccccee
Confidence 999999999999999999999999999999999999999999999999999999999999888443 444556679999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCChhHHHhc
Q 007702 164 MLGVLSIPALLYFAFAVFFLPESPRWLVSK 193 (592)
Q Consensus 164 ~f~i~~i~~~~~~~l~~~~~pEsP~~l~~~ 193 (592)
.|++.+++.++..++.++++||+|++...+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (398)
T TIGR00895 173 LFYVGGIAPLLLLLLLMRFLPESIDFLVSK 202 (398)
T ss_pred ehhhhhhHHHHHHHHHHHhCCCCChHHHhc
Confidence 998887666666667778899998876544
No 29
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.76 E-value=2.4e-18 Score=178.08 Aligned_cols=188 Identities=22% Similarity=0.292 Sum_probs=156.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------CCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHH
Q 007702 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLN--------LGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPM 73 (592)
Q Consensus 2 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~--------~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~ 73 (592)
|+.+..+.++.++.|.++||...++...+.+...|- .++...+.+.++.++|.++|++++|+++|++|||++
T Consensus 37 w~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~v 116 (538)
T KOG0252|consen 37 WKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKV 116 (538)
T ss_pred HHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhh
Confidence 466788999999999999999999999998877652 456788999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhc-------cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHH
Q 007702 74 LILSSVLYFVSGLVMLWSP-------NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLA 146 (592)
Q Consensus 74 li~~~~l~~i~~~~~~~s~-------~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 146 (592)
+...++++++++++++++. -.+++.+.|++.|+|+|+-+|+..+..+|.+..+.||...+..-....+|.+.+
T Consensus 117 YG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG 196 (538)
T KOG0252|consen 117 YGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAG 196 (538)
T ss_pred hhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhc
Confidence 9999999999999887742 257888999999999999999999999999999999999887666666666655
Q ss_pred HHHHHHhHh-----cCC--------CchhHHHHHHHHHHHHHHHHHHhhccCChhHH
Q 007702 147 YCMVFGMSL-----LAS--------PSWRLMLGVLSIPALLYFAFAVFFLPESPRWL 190 (592)
Q Consensus 147 ~~~~~~~~~-----~~~--------~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~l 190 (592)
.++...... .+. .-||..|.+..+|+++.+ ...+.+|||++|-
T Consensus 197 ~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~l-y~Rl~M~Et~~Y~ 252 (538)
T KOG0252|consen 197 GIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVL-YFRLKMPETARYT 252 (538)
T ss_pred cHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH-HhhhcCCcchhHH
Confidence 444333211 111 149999999888888744 5578899999995
No 30
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.76 E-value=5.7e-17 Score=172.67 Aligned_cols=178 Identities=16% Similarity=0.240 Sum_probs=157.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHH
Q 007702 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLV 87 (592)
Q Consensus 8 ~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~ 87 (592)
+....++.+..+.......+.+|.+.+++|.+..+.+++.+.+.++..+++++.|+++||+|||+++.++.++.+++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l 84 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAM 84 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHH
Confidence 34556677778888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHH
Q 007702 88 MLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGV 167 (592)
Q Consensus 88 ~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i 167 (592)
++++++++.+++.|++.|++.+...+....++.|++|+++|++.+++...+..+|..+++. .+....+..+||++|++
T Consensus 85 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~--l~~~l~~~~gwr~~f~~ 162 (382)
T PRK10091 85 FTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIP--LGTYLSQEFSWRYTFLL 162 (382)
T ss_pred HHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhcc--HHHHHhhhccHHHHHHH
Confidence 9999999999999999999999988888999999999999999999988888888888743 34444556799999999
Q ss_pred HHHHHHHHHHHHHhhccCCh
Q 007702 168 LSIPALLYFAFAVFFLPESP 187 (592)
Q Consensus 168 ~~i~~~~~~~l~~~~~pEsP 187 (592)
.+++.++.++..++++||.+
T Consensus 163 ~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 163 IAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred HHHHHHHHHHHHHHhCCCCC
Confidence 88887776666667788864
No 31
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.75 E-value=9e-17 Score=172.42 Aligned_cols=186 Identities=20% Similarity=0.278 Sum_probs=161.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHH
Q 007702 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLY 81 (592)
Q Consensus 2 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~ 81 (592)
++.++..+.+.++.+...++...+.+.+|.+.++++.+..+.++..+.+.++..++.++.|+++||+|||++++++.++.
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 88 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFF 88 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 35677888888888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCch
Q 007702 82 FVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSW 161 (592)
Q Consensus 82 ~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~W 161 (592)
.++.++..++++++.+++.|++.|++.+...+..+.++.|.+|+++|++..++......+|..+++.. .....+..+|
T Consensus 89 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i--~~~l~~~~~w 166 (406)
T PRK15402 89 ILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLV--GAALIHVLPW 166 (406)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHccCc
Confidence 99999999999999999999999999998888899999999999999998888877777777777433 3334456799
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCChhH
Q 007702 162 RLMLGVLSIPALLYFAFAVFFLPESPRW 189 (592)
Q Consensus 162 r~~f~i~~i~~~~~~~l~~~~~pEsP~~ 189 (592)
|++|++.+++.++.++..++..||+++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (406)
T PRK15402 167 RGMFVLFAALAALSFFGLWRAMPETAGR 194 (406)
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCCCCcc
Confidence 9999988888777666666778887643
No 32
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.75 E-value=5.5e-17 Score=175.92 Aligned_cols=182 Identities=17% Similarity=0.189 Sum_probs=161.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHH
Q 007702 6 LVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG 85 (592)
Q Consensus 6 ~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~ 85 (592)
.+.+.+.++++...++...++..+|.+.+++|++..+.+++.+.+.++..++.++.|+++||+|||++++++.++.+++.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~ 102 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIIN 102 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHH
Confidence 45566778888888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHH
Q 007702 86 LVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLML 165 (592)
Q Consensus 86 ~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f 165 (592)
++++++++++.+++.|++.|++.|...+....++.|++|+++|++.+++.+.+..+|..+++.+. ....+..+||++|
T Consensus 103 ~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~--~~l~~~~gw~~~f 180 (434)
T PRK11663 103 ILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVV--GAIALHYGWRYGM 180 (434)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHcccHHHHH
Confidence 99999999999999999999999998899999999999999999999999999999998885433 3344567999999
Q ss_pred HHHHHHHHHHHHHHHhhccCChhH
Q 007702 166 GVLSIPALLYFAFAVFFLPESPRW 189 (592)
Q Consensus 166 ~i~~i~~~~~~~l~~~~~pEsP~~ 189 (592)
++.+++.++..++..+++||+|.+
T Consensus 181 ~~~~i~~~~~~~~~~~~~~~~p~~ 204 (434)
T PRK11663 181 MIAGIIAIVVGLFLCWRLRDKPQA 204 (434)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHhh
Confidence 988887766555666778998865
No 33
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.75 E-value=7.9e-17 Score=170.66 Aligned_cols=178 Identities=24% Similarity=0.333 Sum_probs=156.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHH
Q 007702 9 IAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM 88 (592)
Q Consensus 9 ~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~ 88 (592)
+.+....++.......+.+..|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||++++++.++.+++.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 87 (385)
T TIGR00710 8 LLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGL 87 (385)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 34444456667788888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHH
Q 007702 89 LWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVL 168 (592)
Q Consensus 89 ~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~ 168 (592)
.++++++.+++.|++.|++.+...+....++.|.+|+++|++..++.+....+|..+++.+ .....+..+||++|++.
T Consensus 88 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~--~~~l~~~~~~~~~~~~~ 165 (385)
T TIGR00710 88 ALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLL--GGYILVWLSWHAIFAFL 165 (385)
T ss_pred HHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHcCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998888444 33444567999999988
Q ss_pred HHHHHHHHHHHHhhccCChh
Q 007702 169 SIPALLYFAFAVFFLPESPR 188 (592)
Q Consensus 169 ~i~~~~~~~l~~~~~pEsP~ 188 (592)
+++.++..++.+++.||+++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~ 185 (385)
T TIGR00710 166 SLAGILLSALIFFILPETLP 185 (385)
T ss_pred HHHHHHHHHHHHHhCCCCCC
Confidence 88877766666677888754
No 34
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.75 E-value=3.2e-17 Score=179.64 Aligned_cols=180 Identities=21% Similarity=0.323 Sum_probs=163.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHH
Q 007702 7 VAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGL 86 (592)
Q Consensus 7 ~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~ 86 (592)
.++.++++.++..++....++..|.+.+++|.+..+.+++.+.+.++.+++.++.|+++||+|||++++++.+++.++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHH
Q 007702 87 VMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLG 166 (592)
Q Consensus 87 ~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~ 166 (592)
+++++++++.++++|+++|++.+...+....++.|++|+++|++..++......+|..+++ ..+....+..+||+.|+
T Consensus 83 ~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~--~~~~~l~~~~~w~~~f~ 160 (485)
T TIGR00711 83 LCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGP--TLGGWIIENYHWRWIFL 160 (485)
T ss_pred HHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhh--ccHhHhccCcCceehhh
Confidence 9999999999999999999999999999999999999999999999999999999998884 34455667789999999
Q ss_pred HHHHHHHHHHHHHHhhccCChh
Q 007702 167 VLSIPALLYFAFAVFFLPESPR 188 (592)
Q Consensus 167 i~~i~~~~~~~l~~~~~pEsP~ 188 (592)
+.+++.++..++..+++||+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~ 182 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRDKP 182 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCccc
Confidence 8888877766666777787543
No 35
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.75 E-value=4e-17 Score=171.96 Aligned_cols=178 Identities=24% Similarity=0.187 Sum_probs=143.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHH
Q 007702 10 AATIGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM 88 (592)
Q Consensus 10 ~~~l~~~~~g~~~~~~~~~~~~-i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~ 88 (592)
..+++.+........+.+..|. +++++|++..+.+++.+++.++.++++++.|+++||+|||++++++.++..++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~ 84 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA 84 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 4556666667777788888894 999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhc-cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHh--c------CCC
Q 007702 89 LWSP-NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL--L------ASP 159 (592)
Q Consensus 89 ~~s~-~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~--~------~~~ 159 (592)
++++ +++.+++.|++.|++.+. .+....+++|++|+++|++.+++......+|..+++.+...... . ...
T Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~ 163 (366)
T TIGR00886 85 GLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHL 163 (366)
T ss_pred HHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 9999 999999999999998654 46678899999999999999999887777776666444322111 0 234
Q ss_pred chhHHH-HHHHHHHHHHHHHHHhhccCChh
Q 007702 160 SWRLML-GVLSIPALLYFAFAVFFLPESPR 188 (592)
Q Consensus 160 ~Wr~~f-~i~~i~~~~~~~l~~~~~pEsP~ 188 (592)
+||+.| .+.+++..+..++..++.+|+|+
T Consensus 164 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (366)
T TIGR00886 164 AWGWAFVIVPAGILLLPALLIFFVGADTPP 193 (366)
T ss_pred cccchhHHHHHHHHHHHHHHHHHhcccCCc
Confidence 899999 44455555545555566777764
No 36
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.74 E-value=1.7e-16 Score=174.69 Aligned_cols=185 Identities=23% Similarity=0.305 Sum_probs=162.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHH
Q 007702 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (592)
Q Consensus 4 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i 83 (592)
.+..+..++++.+..+++....++.+|.+.+++|++..+.+++.+.+.++..++.++.|+++||+|||++++++.++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 97 (496)
T PRK03893 18 QWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSV 97 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 35577788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhH
Q 007702 84 SGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRL 163 (592)
Q Consensus 84 ~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~ 163 (592)
+.+++.++++++.+++.|++.|++.+...+....++.|.+|+++|++.+++...+..+|..+++... ....+..+||+
T Consensus 98 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~~l~~~~~w~~ 175 (496)
T PRK03893 98 GTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVY--SLVVPVWGWRA 175 (496)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhccCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999885443 44556779999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCChhHHH
Q 007702 164 MLGVLSIPALLYFAFAVFFLPESPRWLV 191 (592)
Q Consensus 164 ~f~i~~i~~~~~~~l~~~~~pEsP~~l~ 191 (592)
.|++..++.++ .++....+||++++..
T Consensus 176 ~f~~~~~~~~~-~~~~~~~~p~~~~~~~ 202 (496)
T PRK03893 176 LFFIGILPIIF-ALWLRKNLPEAEDWKE 202 (496)
T ss_pred HHHHHHHHHHH-HHHHHHhCCCchhhhh
Confidence 99875444433 4444567788877643
No 37
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.74 E-value=9.1e-17 Score=171.46 Aligned_cols=171 Identities=19% Similarity=0.278 Sum_probs=148.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccH
Q 007702 15 NFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNV 94 (592)
Q Consensus 15 ~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~ 94 (592)
.++.......+.+.+|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||+.++++.++..++.+++.+++++
T Consensus 12 ~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~ 91 (392)
T PRK10473 12 VLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETS 91 (392)
T ss_pred HHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcH
Confidence 33344444455578899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHH
Q 007702 95 YVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALL 174 (592)
Q Consensus 95 ~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~ 174 (592)
+.+++.|++.|++.+...+....++.|.+|+++|++..++.+....+|..+++.+ +....+..+||+.|++.+++.++
T Consensus 92 ~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i--~~~l~~~~g~~~~~~~~~~~~~i 169 (392)
T PRK10473 92 SLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVL--GHLIMLKFPWQSLFYTMAAMGIL 169 (392)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhCcChHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998888888877544 33344567999999998888777
Q ss_pred HHHHHHhhccCCh
Q 007702 175 YFAFAVFFLPESP 187 (592)
Q Consensus 175 ~~~l~~~~~pEsP 187 (592)
..++..+++||++
T Consensus 170 ~~~~~~~~~~~~~ 182 (392)
T PRK10473 170 VLLLSLFILKETR 182 (392)
T ss_pred HHHHHHHHcCCCC
Confidence 7777677788874
No 38
>PRK10133 L-fucose transporter; Provisional
Probab=99.74 E-value=1.5e-16 Score=172.74 Aligned_cols=148 Identities=16% Similarity=0.083 Sum_probs=134.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHH
Q 007702 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (592)
Q Consensus 4 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i 83 (592)
..+.+..+++..++.+++....++..|.++++++++..+.+++.+.+.+++.+++++.|+++||+|||++++++.+++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~ 103 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYAL 103 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 56667778888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH---HhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHH
Q 007702 84 SGLVM---LWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVF 151 (592)
Q Consensus 84 ~~~~~---~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~ 151 (592)
+.+++ .++++++.++++|+++|++.|...+....++.|+.|.++|...+++.+....+|..+++.+..
T Consensus 104 ~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~ 174 (438)
T PRK10133 104 GAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQ 174 (438)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99875 468899999999999999999999999999999887777777888999999999998866543
No 39
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.73 E-value=9.5e-17 Score=167.40 Aligned_cols=175 Identities=29% Similarity=0.484 Sum_probs=152.4
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHh
Q 007702 12 TIGNFLQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW 90 (592)
Q Consensus 12 ~l~~~~~g~~~~~~~~~~~-~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~ 90 (592)
+++.++.++....+.+.+| .+.+++|.+..+.+++.+++.++..++.++.|+++||+|||++++++.++.+++.++..+
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 5677888888888999999 899999999999999999999999999999999999999999999999999999777667
Q ss_pred hccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHH
Q 007702 91 SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSI 170 (592)
Q Consensus 91 s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i 170 (592)
+++++.+++.|++.|++.+...+....++.|++|+++|++.+++.+....+|..++ +..+..+.+..+||++|++.++
T Consensus 82 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g--~~l~~~l~~~~~~~~~~~~~~~ 159 (352)
T PF07690_consen 82 ASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILG--PLLGGFLISYFGWRWAFLISAI 159 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHH--HHHHHHCCCHCHHCCHHHHHHH
T ss_pred hhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcc--cchhhhhhhccccccccccccc
Confidence 78888999999999999999999999999999999999999999999999999998 4445555677799999999999
Q ss_pred HHHHHHHHHHhhccCChh
Q 007702 171 PALLYFAFAVFFLPESPR 188 (592)
Q Consensus 171 ~~~~~~~l~~~~~pEsP~ 188 (592)
+.++.+++..++++++|.
T Consensus 160 ~~~~~~il~~~~~~~~~~ 177 (352)
T PF07690_consen 160 LSLIAAILFILFLPEPPP 177 (352)
T ss_dssp HHHHHHHHHHCCC---ST
T ss_pred hhhhhhhhHhhhhhhccc
Confidence 888876655566665544
No 40
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.73 E-value=4.6e-16 Score=166.19 Aligned_cols=185 Identities=19% Similarity=0.214 Sum_probs=157.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHH
Q 007702 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (592)
Q Consensus 3 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~ 82 (592)
+.+.....+.+..+...+....+.+.+|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||++++++.++.+
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~ 84 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFI 84 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHH
Confidence 44555555555666666777778888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchh
Q 007702 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (592)
Q Consensus 83 i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr 162 (592)
++.+++.++++++.+++.|++.|++.+...+....+..|.+|.++|+..+++.+.+..+|..+++.. .....+..+||
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i--~~~l~~~~g~~ 162 (394)
T PRK11652 85 LGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLI--GGLLTTLFGWR 162 (394)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhccChH
Confidence 9999999999999999999999999998888888899999999999999999988888888887443 33444567999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCChhH
Q 007702 163 LMLGVLSIPALLYFAFAVFFLPESPRW 189 (592)
Q Consensus 163 ~~f~i~~i~~~~~~~l~~~~~pEsP~~ 189 (592)
++|++.+++.++..++..++.||+|..
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~~~~~~~~ 189 (394)
T PRK11652 163 ACYLFLLLLGAGVTFSMARWMPETRPA 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccCcc
Confidence 999988877776666666778987643
No 41
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.72 E-value=1e-16 Score=175.45 Aligned_cols=186 Identities=17% Similarity=-0.005 Sum_probs=157.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHH
Q 007702 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (592)
Q Consensus 4 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i 83 (592)
.+.+...++++++....+...++.+.|.+.+++|++..+.|++.+++.+++.++.++.|+++||+|||+++.++.++.++
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 106 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAI 106 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHH
Confidence 34466777888888888999999999999999999999999999999999999999999999999999999888888777
Q ss_pred HHHHHHh-----hccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhc-C
Q 007702 84 SGLVMLW-----SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL-A 157 (592)
Q Consensus 84 ~~~~~~~-----s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~-~ 157 (592)
++++.++ +++++.+++.|++.|++.+...+....+++|++|+++||+++++.+.+..+|..++..+....... .
T Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~ 186 (467)
T PRK09556 107 CMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFF 186 (467)
T ss_pred HHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhc
Confidence 7666654 689999999999999999999999999999999999999999999999999998886554322211 1
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHhhccCChhH
Q 007702 158 SPSWRLMLGVLSIPALLYFAFAVFFLPESPRW 189 (592)
Q Consensus 158 ~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~ 189 (592)
..+||..|.+.+++.++..++.+++.+++|..
T Consensus 187 ~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~ 218 (467)
T PRK09556 187 DGHVIGMFIFPSIIALIIGFIGLRYGSDSPEE 218 (467)
T ss_pred cCcchhHHHHHHHHHHHHHHHHHHhCCCChhh
Confidence 23699999888888777666666777777653
No 42
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.70 E-value=2.9e-16 Score=162.05 Aligned_cols=187 Identities=17% Similarity=0.164 Sum_probs=173.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHH
Q 007702 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (592)
Q Consensus 3 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~ 82 (592)
.++-+.+.+.+++..+++....++.+.|.+.++.+++.++.|++.+.+.+.+.++.++.|.++||.+.|..+..++++.+
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsa 105 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSA 105 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHH
Confidence 45667888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchh
Q 007702 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (592)
Q Consensus 83 i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr 162 (592)
+.+++++++++++.+.+.-++.|+..|.-.|.+...++.++|+++||+..++.+.+.++|..+.+.+........+.+||
T Consensus 106 i~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~ 185 (448)
T COG2271 106 IVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWR 185 (448)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchh
Confidence 99999999999999999999999999999999999999999999999999999999999998886655434455566999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCChhH
Q 007702 163 LMLGVLSIPALLYFAFAVFFLPESPRW 189 (592)
Q Consensus 163 ~~f~i~~i~~~~~~~l~~~~~pEsP~~ 189 (592)
..|++.+++++++.++.++.++++|.-
T Consensus 186 ~~f~~pgiiaiival~~~~~~rd~Pqs 212 (448)
T COG2271 186 AAFYFPGIIAIIVALILLFLLRDRPQS 212 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 999999999999999999999999864
No 43
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.70 E-value=1.3e-15 Score=167.69 Aligned_cols=190 Identities=16% Similarity=0.185 Sum_probs=139.1
Q ss_pred HHHHH-HHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHH---HHhhccHHHHHHHH
Q 007702 26 AGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLV---MLWSPNVYVLCIAR 101 (592)
Q Consensus 26 ~~~~~-~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~---~~~s~~~~~ll~~R 101 (592)
...+| ++++++|.+....+++.+...++..++.++.|+++||+|||++++++.++..++.+. ...+++...+++++
T Consensus 270 ~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (490)
T PRK10642 270 LTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGL 349 (490)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 33444 456778998887888888889999999999999999999999998887654433322 22345677888899
Q ss_pred HHHHhhhhhhhhHHHHHHHhhcCccccchhhHH-HHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHH
Q 007702 102 LLDGFGVGLAVTLVPLYISETAPSEIRGRLNTL-PQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAV 180 (592)
Q Consensus 102 ~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~-~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~ 180 (592)
++.|++.+...+..+.++.|.+|++.||...++ ++++..+|.+..++..+.. ....+|+.++++..+++++.+ +..
T Consensus 350 ~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~--~~~~~~~~~~~~~~~~~~i~~-~~~ 426 (490)
T PRK10642 350 LMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLV--ESTQNLMMPAYYLMVVAVIGL-ITG 426 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHH--HHhCCchHHHHHHHHHHHHHH-HHH
Confidence 999998888778888899999999999998886 5665555543332222221 122367888777777666644 445
Q ss_pred hhccCChhHHHhc-----CcHHHHHHHHHHHhCCCCchHHHHHHH
Q 007702 181 FFLPESPRWLVSK-----GKMLEAKQVLQRLRGREDVSGEMALLV 220 (592)
Q Consensus 181 ~~~pEsP~~l~~~-----~~~~ea~~~l~~l~~~~~~~~~~~~i~ 220 (592)
+++||||+|+.++ +|.+||++.+++++. +++.|++++.
T Consensus 427 ~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~~--~~~~~~~~i~ 469 (490)
T PRK10642 427 VTMKETANRPLKGATPAASDIQEAKEILVEHYD--NIEQKIDDID 469 (490)
T ss_pred HHhccccCCCCCCccccccchhhHHHHhhcccc--cccchhhhcc
Confidence 6779999998765 999999999999983 4455555444
No 44
>PRK10504 putative transporter; Provisional
Probab=99.69 E-value=1.3e-15 Score=166.82 Aligned_cols=180 Identities=19% Similarity=0.286 Sum_probs=158.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHH
Q 007702 6 LVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG 85 (592)
Q Consensus 6 ~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~ 85 (592)
...+.++++.++..++...+++.+|.+.+++|.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.+++.++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~ 89 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGS 89 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 34566778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHH
Q 007702 86 LVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLML 165 (592)
Q Consensus 86 ~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f 165 (592)
+++.++++++.+++.|+++|++.+...+....++.|.+|+++|+...++......+|..+++.+ .....+..+||+.|
T Consensus 90 ~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~--~g~l~~~~gw~~~f 167 (471)
T PRK10504 90 LFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPAL--GGLLVEYASWHWIF 167 (471)
T ss_pred HHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHH--HHHHHhhccHHHHH
Confidence 9889999999999999999999999999999999999999999999999999888998888444 44445667999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCh
Q 007702 166 GVLSIPALLYFAFAVFFLPESP 187 (592)
Q Consensus 166 ~i~~i~~~~~~~l~~~~~pEsP 187 (592)
.+.....++..++.....|+.+
T Consensus 168 ~~~~~~~~l~~~~~~~~~~~~~ 189 (471)
T PRK10504 168 LINIPVGIIGAIATLMLMPNYT 189 (471)
T ss_pred HHHHHHHHHHHHHHHHhCCCcc
Confidence 8887776666666666666653
No 45
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.69 E-value=1.5e-16 Score=167.36 Aligned_cols=175 Identities=19% Similarity=0.205 Sum_probs=155.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhc
Q 007702 13 IGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP 92 (592)
Q Consensus 13 l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~ 92 (592)
++++...++...++...|++.+++|++..+.+++.+++.++..++.++.|+++||+|||++++++.++..++.+++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 81 (379)
T TIGR00881 2 IGYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST 81 (379)
T ss_pred chhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh
Confidence 35677788888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHH
Q 007702 93 NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPA 172 (592)
Q Consensus 93 ~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~ 172 (592)
+++.+++.|++.|++.+...+....+++|++|+++|++.+++.+.+..+|..+++.. .........+||+.|++.+++.
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 160 (379)
T TIGR00881 82 SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPL-VLFGIAELYSWHWVFIVPGIIA 160 (379)
T ss_pred hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHH-HHHHHHhcCCchhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999888521 2223345679999999888877
Q ss_pred HHHHHHHHhhccCChh
Q 007702 173 LLYFAFAVFFLPESPR 188 (592)
Q Consensus 173 ~~~~~l~~~~~pEsP~ 188 (592)
++..++.+++.||+|+
T Consensus 161 ~~~~~~~~~~~~~~~~ 176 (379)
T TIGR00881 161 IIVSLICFLLLRDSPQ 176 (379)
T ss_pred HHHHHHHheeeCCCcc
Confidence 7766677778888764
No 46
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.69 E-value=1.6e-15 Score=158.91 Aligned_cols=166 Identities=12% Similarity=0.095 Sum_probs=144.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHh
Q 007702 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW 90 (592)
Q Consensus 11 ~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~ 90 (592)
+.++.++..+......+.+|.+..+++.+..+.+++.+++.++.+++.++.|+++||+|||++++++.++..++.++..+
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH
Confidence 34566777777778888888899999999999999999999999999999999999999999999999999988888888
Q ss_pred hc-----cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHH
Q 007702 91 SP-----NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLML 165 (592)
Q Consensus 91 s~-----~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f 165 (592)
++ +++.+++.|++.|++.+...+....+++|++|+++|++.+++.+....+|.++++.+ +..+.+..+||+.|
T Consensus 84 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l--~~~l~~~~g~~~~~ 161 (365)
T TIGR00900 84 VALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGI--GGLMYATLGIKWAI 161 (365)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHH--HHHHHHHhhHHHHH
Confidence 77 999999999999999999999999999999999999999999999999999988544 34444566999999
Q ss_pred HHHHHHHHHHHHH
Q 007702 166 GVLSIPALLYFAF 178 (592)
Q Consensus 166 ~i~~i~~~~~~~l 178 (592)
++.++..++..++
T Consensus 162 ~~~~~~~~~~~~~ 174 (365)
T TIGR00900 162 WVDAVGFAISALL 174 (365)
T ss_pred HHHHHHHHHHHHH
Confidence 8877766554433
No 47
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.69 E-value=1.9e-16 Score=173.08 Aligned_cols=185 Identities=16% Similarity=0.217 Sum_probs=160.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------HcCCCchHHHHHHHHHHHHHHHHHhh
Q 007702 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKK----------------------DLNLGTTVEGLVVAMSLIGATAITTC 60 (592)
Q Consensus 3 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~----------------------~~~~s~~~~gli~s~~~lg~~ig~~~ 60 (592)
.++.+...++++......|...++.+.+.+.+ +++++..+.|++.+.+.++++++.++
T Consensus 16 ~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~ 95 (465)
T TIGR00894 16 FRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQIP 95 (465)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHHcc
Confidence 45677788888888889999888888777766 78899999999999999999999999
Q ss_pred HHhhhhhcCchHHHHHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHH
Q 007702 61 SGPISDWLGRRPMLILSSVLYFVSGLVMLWS--PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFT 138 (592)
Q Consensus 61 ~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s--~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~ 138 (592)
.|+++||+|||+++.++.++.+++++++.++ .+++.+++.|+++|++.+...+....+++|++|+++|++.+++.+.+
T Consensus 96 ~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 175 (465)
T TIGR00894 96 VGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSG 175 (465)
T ss_pred hHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999988887554 56888999999999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHHHHHhHhcCC-CchhHHHHHHHHHHHHHHHHHHhhccCChhH
Q 007702 139 GSGGMFLAYCMVFGMSLLAS-PSWRLMLGVLSIPALLYFAFAVFFLPESPRW 189 (592)
Q Consensus 139 ~~~G~~l~~~~~~~~~~~~~-~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~ 189 (592)
..+|..+++.+. ..+.+. .+||++|++.+++.++..++.+++.||+|+.
T Consensus 176 ~~~g~~i~~~l~--~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~ 225 (465)
T TIGR00894 176 FQLGTFIFLPIS--GWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSI 225 (465)
T ss_pred HHHHHHHHHHHH--HHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCccc
Confidence 999999985544 334445 4999999999988887666666777788753
No 48
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.68 E-value=3.8e-16 Score=165.15 Aligned_cols=175 Identities=23% Similarity=0.330 Sum_probs=137.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCC--CchHHHHHHHH-----HHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHH
Q 007702 15 NFLQGWDNATIAGAIVYIKKDLNL--GTTVEGLVVAM-----SLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLV 87 (592)
Q Consensus 15 ~~~~g~~~~~~~~~~~~i~~~~~~--s~~~~gli~s~-----~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~ 87 (592)
.+.+.++...++...+++.+++.. ++...+...+. ..++..+++++.|+++||+|||++++++.++..++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~ 81 (394)
T TIGR00883 2 NAVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLL 81 (394)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 356788888888888888888653 34445444433 33444578899999999999999999999999999999
Q ss_pred HHhhccHH--------HHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHh----
Q 007702 88 MLWSPNVY--------VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL---- 155 (592)
Q Consensus 88 ~~~s~~~~--------~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~---- 155 (592)
+++++++. .+++.|+++|++.+...+..+.+++|.+|+++|++..++.+.+..+|.++++.+......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~ 161 (394)
T TIGR00883 82 IGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGD 161 (394)
T ss_pred HhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 99998865 588899999999999999999999999999999999999999999999888655433221
Q ss_pred --cCCCchhHHHHHHHHHHHHHHHHHHhhccCChhHH
Q 007702 156 --LASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWL 190 (592)
Q Consensus 156 --~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~l 190 (592)
....+||++|.+.+++.++. ++....+||+|++.
T Consensus 162 ~~~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 197 (394)
T TIGR00883 162 DALLEWGWRIPFLVSAVLVLIG-LYLRRNLEETPVFE 197 (394)
T ss_pred HHhhccchHHHHHHHHHHHHHH-HHHHHhcCCChhHH
Confidence 13568999998877665543 34456678887653
No 49
>PRK03699 putative transporter; Provisional
Probab=99.68 E-value=2.5e-15 Score=160.76 Aligned_cols=175 Identities=13% Similarity=0.099 Sum_probs=152.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHH
Q 007702 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (592)
Q Consensus 3 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~ 82 (592)
+++...+.++++.+..+.+...++..+|.+.+++|++..+.+++.+.+.++..++.++.|+++||+|||++++++.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 44566777888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchh
Q 007702 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (592)
Q Consensus 83 i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr 162 (592)
++.++..++++++.+++.|++.|++.|...+....++.|.+|+++|+..++..+....+|..+++.+. ........+||
T Consensus 84 i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~-~~l~~~~~gw~ 162 (394)
T PRK03699 84 LAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIA-AYLLARSIEWY 162 (394)
T ss_pred HHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccccHH
Confidence 99999999999999999999999999999888999999999999999999988877777777764332 22223456999
Q ss_pred HHHHHHHHHHHHHHHH
Q 007702 163 LMLGVLSIPALLYFAF 178 (592)
Q Consensus 163 ~~f~i~~i~~~~~~~l 178 (592)
++|.+.+++.++.+++
T Consensus 163 ~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 163 WVYACIGLVYVAIFIL 178 (394)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9998888777664433
No 50
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.68 E-value=3.6e-15 Score=163.69 Aligned_cols=183 Identities=17% Similarity=0.127 Sum_probs=147.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHH
Q 007702 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (592)
Q Consensus 4 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i 83 (592)
.........+..+...++.....+..|.+.+++|++..+.+++.+.+.+++.+++++.|+++||+|||+++.++.++.++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~ 113 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAP 113 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 34555566666777777777888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHh--Hh-----c
Q 007702 84 SGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGM--SL-----L 156 (592)
Q Consensus 84 ~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~--~~-----~ 156 (592)
+.++++++++++.+++.|++.|++.+... ....+++|++|+++||+.+++.+....+|..++..+.... .. .
T Consensus 114 ~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 192 (476)
T PLN00028 114 AVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAP 192 (476)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999887653 4566889999999999999998766666665553322111 11 1
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHhhccCCh
Q 007702 157 ASPSWRLMLGVLSIPALLYFAFAVFFLPESP 187 (592)
Q Consensus 157 ~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP 187 (592)
+..+||++|++.+++.++..++.+++.++.|
T Consensus 193 ~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p 223 (476)
T PLN00028 193 SFTAWRIAFFVPGLLHIIMGILVLTLGQDLP 223 (476)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHcCcCC
Confidence 1258999999998888776655555555554
No 51
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.68 E-value=1.7e-15 Score=165.10 Aligned_cols=182 Identities=17% Similarity=0.150 Sum_probs=150.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHH
Q 007702 5 ALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVS 84 (592)
Q Consensus 5 ~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~ 84 (592)
+.++..+++.....+.+...++..+|++.++ |++..+.+++.+++.++.++++++.|+++||+|||++++++.++.+++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~ 106 (452)
T PRK11273 28 WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAV 106 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHH
Confidence 4444555566666666766777888998888 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhc----cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHH-HHHHHHHHhHhcCCC
Q 007702 85 GLVMLWSP----NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMF-LAYCMVFGMSLLASP 159 (592)
Q Consensus 85 ~~~~~~s~----~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~-l~~~~~~~~~~~~~~ 159 (592)
.+++++++ +++.+++.|++.|++.|...+.....+.|++|+++|++.+++.+.+..+|.. .++....... ...
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~--~~~ 184 (452)
T PRK11273 107 MLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMA--WFN 184 (452)
T ss_pred HHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH--Hhc
Confidence 98887753 7888999999999999988888888899999999999999999888888763 3433222221 234
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhccCChhH
Q 007702 160 SWRLMLGVLSIPALLYFAFAVFFLPESPRW 189 (592)
Q Consensus 160 ~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~ 189 (592)
+||+.|++.+++.++..++.++++||+|+.
T Consensus 185 gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~ 214 (452)
T PRK11273 185 DWHAALYMPAFAAILVALFAFAMMRDTPQS 214 (452)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHccCCHhh
Confidence 999999998888777777778888998864
No 52
>PRK11043 putative transporter; Provisional
Probab=99.68 E-value=5.9e-15 Score=157.99 Aligned_cols=176 Identities=22% Similarity=0.240 Sum_probs=145.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHH
Q 007702 9 IAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM 88 (592)
Q Consensus 9 ~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~ 88 (592)
+.+.+..++..+....+.|.+|.++++++.+..+.+++.+++.++..++++++|+++||+|||+.++.+.++..++.+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 88 (401)
T PRK11043 9 VYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGM 88 (401)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHH
Confidence 33333344455667788888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHH
Q 007702 89 LWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVL 168 (592)
Q Consensus 89 ~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~ 168 (592)
.++++++.+++.|++.|++.+...+....++.|.+|+++++...+.......+|..+++.. .....+..+||++|++.
T Consensus 89 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i--~~~l~~~~g~~~~~~~~ 166 (401)
T PRK11043 89 LWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLL--GAWLLNHFGWQAIFATL 166 (401)
T ss_pred HHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhcCChHHHHHHH
Confidence 9999999999999999999888888888899999999999888888777777777777433 33444567999999988
Q ss_pred HHHHHHHHHHHHhhccCCh
Q 007702 169 SIPALLYFAFAVFFLPESP 187 (592)
Q Consensus 169 ~i~~~~~~~l~~~~~pEsP 187 (592)
+++.++..++. ++++|++
T Consensus 167 ~~~~~~~~~~~-~~~~~~~ 184 (401)
T PRK11043 167 FAITLLLILPT-LRLKPSK 184 (401)
T ss_pred HHHHHHHHHHH-HHcCCCC
Confidence 88777655443 4455543
No 53
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.67 E-value=2.2e-15 Score=161.28 Aligned_cols=149 Identities=17% Similarity=0.265 Sum_probs=131.4
Q ss_pred HHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Q 007702 23 ATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARL 102 (592)
Q Consensus 23 ~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~ 102 (592)
..+++++|.++++++++.++.+++.+.+.++..+++++.|+++||+|||++++.+.++++++.++++++++++.++++|+
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~ 105 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSAL 105 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHH
Confidence 56778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCC-CchhHHHHHHHHHHHH
Q 007702 103 LDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLAS-PSWRLMLGVLSIPALL 174 (592)
Q Consensus 103 l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~-~~Wr~~f~i~~i~~~~ 174 (592)
++|++.+...+..+.++.+.+| ++|++.++....+..+|..++..+. ..+.++ .+||+.+.+.+++.++
T Consensus 106 l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~--~~l~~~~~~w~~~~~~~~~~~~~ 175 (393)
T PRK09705 106 LGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAIT--PWLVQHSETWYQTLAWWALPAVV 175 (393)
T ss_pred HHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHH--HHHHHhcCCHHHHHHHHHHHHHH
Confidence 9999999999999999999997 7899999999988888888775433 333333 4899988766655444
No 54
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.67 E-value=6.2e-15 Score=158.66 Aligned_cols=179 Identities=15% Similarity=0.097 Sum_probs=152.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHH
Q 007702 7 VAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGL 86 (592)
Q Consensus 7 ~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~ 86 (592)
..+.+++..+..|+.....++..|.+++++|++..+.+++.+.+.++..+++++.|++.||+|||++++++.++++++.+
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~ 83 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAF 83 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 45677788899999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHh---hccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhc-------
Q 007702 87 VMLW---SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL------- 156 (592)
Q Consensus 87 ~~~~---s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~------- 156 (592)
++.. .++++.+++.|++.|++.|...+....++.+..|+++|++..++.+....+|..+++.+.......
T Consensus 84 l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~ 163 (410)
T TIGR00885 84 LFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQ 163 (410)
T ss_pred HHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchh
Confidence 8654 468999999999999999999999999999999999999999999999999999886655433211
Q ss_pred -----------------CCCchhHHHHHHHHHHHHHHHHHH-hhccC
Q 007702 157 -----------------ASPSWRLMLGVLSIPALLYFAFAV-FFLPE 185 (592)
Q Consensus 157 -----------------~~~~Wr~~f~i~~i~~~~~~~l~~-~~~pE 185 (592)
+..+||++|.+.+++.++.+++.. ...||
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~ 210 (410)
T TIGR00885 164 DVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPA 210 (410)
T ss_pred hhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 113699999888887666444332 22554
No 55
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.67 E-value=2.9e-15 Score=158.62 Aligned_cols=166 Identities=20% Similarity=0.340 Sum_probs=147.2
Q ss_pred HHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Q 007702 21 DNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIA 100 (592)
Q Consensus 21 ~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~ 100 (592)
....+.|.+|.+.+++|++..+.+++.+++.++..++.++.|+++||+|||+++.++.++.+++.+++.++++++.+++.
T Consensus 6 ~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 85 (377)
T PRK11102 6 AIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYM 85 (377)
T ss_pred HHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 34556788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHH
Q 007702 101 RLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAV 180 (592)
Q Consensus 101 R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~ 180 (592)
|++.|++.+...+....++.|.+|+++|++.+++.+....+|..+++.. .....+..+||++|++.+++.++..++..
T Consensus 86 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 86 RFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPII--GGWLLVWFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999888544 33444566899999988888777666667
Q ss_pred hhccCChh
Q 007702 181 FFLPESPR 188 (592)
Q Consensus 181 ~~~pEsP~ 188 (592)
+++||+++
T Consensus 164 ~~~~~~~~ 171 (377)
T PRK11102 164 FFIPETLP 171 (377)
T ss_pred HhCCccCc
Confidence 78888743
No 56
>PRK12382 putative transporter; Provisional
Probab=99.65 E-value=1.1e-14 Score=155.40 Aligned_cols=166 Identities=17% Similarity=0.220 Sum_probs=134.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHH
Q 007702 7 VAIAATIGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG 85 (592)
Q Consensus 7 ~~~~~~l~~~~~g~~~~~~~~~~~~-i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~ 85 (592)
.++.+.++.+..........+.+|. +.+++|++..+.+++.+.+.++..+++++.|+++||+|||++++.+.++..++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~ 95 (392)
T PRK12382 16 SLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAG 95 (392)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHH
Confidence 3444555566666667777777775 688999999999999999999999999999999999999999999988877665
Q ss_pred HHHHh--------hccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcC
Q 007702 86 LVMLW--------SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA 157 (592)
Q Consensus 86 ~~~~~--------s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~ 157 (592)
+.... .++++.++++|+++|++.+...+....++.|.+|+++|++++++.+.+..+|..+++.. +.....
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~--~~~l~~ 173 (392)
T PRK12382 96 LAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPL--GLLLHS 173 (392)
T ss_pred HHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHH--HHHHHh
Confidence 43321 35788999999999999999888888999999999999999999999888888888443 344445
Q ss_pred CCchhHHHHHHHHHHHH
Q 007702 158 SPSWRLMLGVLSIPALL 174 (592)
Q Consensus 158 ~~~Wr~~f~i~~i~~~~ 174 (592)
..+||+.+.+..+..++
T Consensus 174 ~~g~~~~~~~~~~~~~~ 190 (392)
T PRK12382 174 HFGFAALALTTMVLPLL 190 (392)
T ss_pred ccChHHHHHHHHHHHHH
Confidence 67899887665554443
No 57
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.64 E-value=1e-14 Score=155.92 Aligned_cols=167 Identities=19% Similarity=0.226 Sum_probs=140.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHH
Q 007702 6 LVAIAATIGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVS 84 (592)
Q Consensus 6 ~~~~~~~l~~~~~g~~~~~~~~~~~~-i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~ 84 (592)
.-+..+.+..++...+.....+.+|. +++++|.+..+.+++.+++.++..+++++.|.++||+|||++++.+.++++++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALS 94 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHH
Confidence 34455667777777888888888886 68899999999999999999999999999999999999999999999988887
Q ss_pred HHHHHhh--------ccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhc
Q 007702 85 GLVMLWS--------PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL 156 (592)
Q Consensus 85 ~~~~~~s--------~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~ 156 (592)
.+.+.++ .+++.+++.|++.|++.+...+....++.|..|+++|++.+++.+....+|..+++. .+..+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~--l~~~l~ 172 (399)
T PRK05122 95 GLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAP--LGVLLY 172 (399)
T ss_pred HHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHH--HHHHHH
Confidence 6665543 256789999999999999999999999999999999999999988888888887743 344445
Q ss_pred CCCchhHHHHHHHHHHHH
Q 007702 157 ASPSWRLMLGVLSIPALL 174 (592)
Q Consensus 157 ~~~~Wr~~f~i~~i~~~~ 174 (592)
+..+|++.+++..+..++
T Consensus 173 ~~~g~~~~~~~~~~~~~~ 190 (399)
T PRK05122 173 HWGGLAGLGLLIMLLALL 190 (399)
T ss_pred HcccHHHHHHHHHHHHHH
Confidence 567999998776665544
No 58
>PTZ00207 hypothetical protein; Provisional
Probab=99.64 E-value=2.1e-14 Score=158.83 Aligned_cols=200 Identities=15% Similarity=0.103 Sum_probs=149.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHH
Q 007702 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (592)
Q Consensus 3 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~ 82 (592)
++|+.+.+..+.....|. ...++...+.+++++|++..+.+++.++. ....+..+++|+++||+|||++++++.+++.
T Consensus 25 ~Rw~~lva~~~~~~~~g~-~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~ 102 (591)
T PTZ00207 25 RRFALLVLGAFCSICTSF-MYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFC 102 (591)
T ss_pred chHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 344444444443333333 44556677889999999999988888763 3444567789999999999999999999999
Q ss_pred HHHHHHHhh------ccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhc
Q 007702 83 VSGLVMLWS------PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL 156 (592)
Q Consensus 83 i~~~~~~~s------~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~ 156 (592)
+++++++++ ++++.+++.|++.|++.+...+.+...+.+++| ++||++.++...+..+|..+...+..... .
T Consensus 103 iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~-~ 180 (591)
T PTZ00207 103 LGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF-S 180 (591)
T ss_pred HHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 999999987 689999999999999999998999999999997 78999999999999999875432322222 1
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHhhc--cCChhHHHhcCcHHHHHHHHHHHhC
Q 007702 157 ASPSWRLMLGVLSIPALLYFAFAVFFL--PESPRWLVSKGKMLEAKQVLQRLRG 208 (592)
Q Consensus 157 ~~~~Wr~~f~i~~i~~~~~~~l~~~~~--pEsP~~l~~~~~~~ea~~~l~~l~~ 208 (592)
.+|+..|++.++++++..++.++++ |++|+|...+++.+++++.++++++
T Consensus 181 --~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~ 232 (591)
T PTZ00207 181 --DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRK 232 (591)
T ss_pred --HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhh
Confidence 3688888888888777666666655 4455665556555566666555443
No 59
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.63 E-value=1.2e-14 Score=153.57 Aligned_cols=175 Identities=20% Similarity=0.214 Sum_probs=142.3
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHH-HHHHHHHHHHHHHh
Q 007702 13 IGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLIL-SSVLYFVSGLVMLW 90 (592)
Q Consensus 13 l~~~~~g~~~~~~~~~~~~-i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~-~~~l~~i~~~~~~~ 90 (592)
+.++..++......+.+|. +++++|.+..+.+++.+.+.++..+..++.|.++||+|||+.+++ +.++..++.+++++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 83 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW 83 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh
Confidence 4577778888888887775 678999999999999999999999999999999999999887655 55566677788889
Q ss_pred hccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchh--hHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHH
Q 007702 91 SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRL--NTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVL 168 (592)
Q Consensus 91 s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~--~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~ 168 (592)
+++++.+++.|++.|.+.+...|....++.|..|++.|+.. .+.......+|..+++. ......+..+||++|++.
T Consensus 84 ~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~--~~~~l~~~~~~~~~f~~~ 161 (375)
T TIGR00899 84 NRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPP--LAFWLALGFGFTVMFLTA 161 (375)
T ss_pred cchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhh--HHHHHHHhcccHHHHHHH
Confidence 99999999999999888887888888889999988877654 56667777788888743 334445567999999998
Q ss_pred HHHHHHHHHHHHhhccCChhH
Q 007702 169 SIPALLYFAFAVFFLPESPRW 189 (592)
Q Consensus 169 ~i~~~~~~~l~~~~~pEsP~~ 189 (592)
+++.++..++.++++||.|++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~ 182 (375)
T TIGR00899 162 ALAFVLCGVLVWLFLPSYPRG 182 (375)
T ss_pred HHHHHHHHHHHHHhCCCcccC
Confidence 888777666667778998764
No 60
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.62 E-value=3e-14 Score=152.40 Aligned_cols=176 Identities=21% Similarity=0.217 Sum_probs=148.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchH-----HHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHH
Q 007702 9 IAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTV-----EGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (592)
Q Consensus 9 ~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~-----~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i 83 (592)
..+.++.++.++....+.+.+|.+.+++|++..+ .+++.+++.++..++.++.|+++||+|||++++.+.++..+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 96 (408)
T PRK09874 17 TVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGI 96 (408)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHH
Confidence 3456677778888888888999999999988643 48899999999999999999999999999999999999999
Q ss_pred HHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhH
Q 007702 84 SGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRL 163 (592)
Q Consensus 84 ~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~ 163 (592)
+.+++.++++++.+++.|++.|++.+ ..+....++.+.+|+++|++.+++.+....+|.++++.+. ..+.+..+||+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~l~~~~~~~~ 173 (408)
T PRK09874 97 VMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAG--GLLADSYGLRP 173 (408)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHH--HHHHHHhCHHH
Confidence 99998899999999999999999765 4567778899999999999999999998889988885443 34445668999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCh
Q 007702 164 MLGVLSIPALLYFAFAVFFLPESP 187 (592)
Q Consensus 164 ~f~i~~i~~~~~~~l~~~~~pEsP 187 (592)
.|++.+++.++..++.++++||.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~ 197 (408)
T PRK09874 174 VFFITASVLFLCFLVTLFCIRENF 197 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCc
Confidence 999888877776666667778764
No 61
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.62 E-value=1.4e-14 Score=157.33 Aligned_cols=183 Identities=16% Similarity=0.129 Sum_probs=150.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHH
Q 007702 5 ALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVS 84 (592)
Q Consensus 5 ~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~ 84 (592)
+..++.+.+++.....+...+....|++++ +|++.++.+++.+++.++..+++++.|+++||+|||++++++.++.+++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~ 104 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAV 104 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHH
Confidence 444555666667777766667777788775 5999999999999999999999999999999999999999999999998
Q ss_pred HHHHHhh----ccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCc
Q 007702 85 GLVMLWS----PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS 160 (592)
Q Consensus 85 ~~~~~~s----~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~ 160 (592)
.++.++. ++++.+.+.|++.|++.|...+....++.|++|+++||+.+++.+....+|..+++.+... ......+
T Consensus 105 ~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~-~~~~~~~ 183 (438)
T TIGR00712 105 MLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLL-GMAWFND 183 (438)
T ss_pred HHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHH-HHHHhhh
Confidence 8877664 4677888999999999999888888999999999999999999999888888776433322 1222458
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccCChhH
Q 007702 161 WRLMLGVLSIPALLYFAFAVFFLPESPRW 189 (592)
Q Consensus 161 Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~ 189 (592)
||..|++.+++.++..++.++++||+|+.
T Consensus 184 w~~~f~~~~~~~~i~~~~~~~~~~~~~~~ 212 (438)
T TIGR00712 184 WHAALYFPAICAIIVALFAFAMMRDTPQS 212 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCHHh
Confidence 99999998888887776777888998764
No 62
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.61 E-value=3.9e-14 Score=151.61 Aligned_cols=179 Identities=16% Similarity=0.177 Sum_probs=141.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHH
Q 007702 1 MNGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVL 80 (592)
Q Consensus 1 m~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l 80 (592)
|+|.+. .++++.++..+....+....+.+.++++.+....+++.+.+.+++.+..++.|+++||+|||++++++.++
T Consensus 1 ~~~~f~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~ 77 (393)
T PRK11195 1 MSKGFY---AIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGI 77 (393)
T ss_pred CCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHH
Confidence 455544 34556666666544455555667889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCc
Q 007702 81 YFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS 160 (592)
Q Consensus 81 ~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~ 160 (592)
.++++++++++++. ++.|+++|++.+...|...+++.|++|+++|++++++.+....+|..+++.+. ..+.+. .
T Consensus 78 ~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lg--G~l~~~-~ 151 (393)
T PRK11195 78 KLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLG--GALADP-H 151 (393)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH-H
Confidence 99988887777664 67899999999999999999999999999999999999999989988885544 333322 3
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccCChhH
Q 007702 161 WRLMLGVLSIPALLYFAFAVFFLPESPRW 189 (592)
Q Consensus 161 Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~ 189 (592)
|+.++.+.++..++ .++..+++||+|..
T Consensus 152 ~~~~~~i~~~~~~~-~~~~~~~l~~~~~~ 179 (393)
T PRK11195 152 AEAALAVCALIYLL-AALFNLFIPRLGAR 179 (393)
T ss_pred HHHHHHHHHHHHHH-HHHHHhcCCCCccc
Confidence 77777666555443 33455778887643
No 63
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.61 E-value=5.9e-14 Score=150.59 Aligned_cols=172 Identities=19% Similarity=0.262 Sum_probs=144.7
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHh
Q 007702 12 TIGNFLQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW 90 (592)
Q Consensus 12 ~l~~~~~g~~~~~~~~~~~-~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~ 90 (592)
..+.++.......+.+.++ ++.+++|++..+.|++.+...++..+..++.|+++||+|||++++++.++..++.+.+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~ 95 (400)
T PRK11646 16 LIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAI 95 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555555544 578899999999999999999999999999999999999999999999999999999999
Q ss_pred hccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHH
Q 007702 91 SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSI 170 (592)
Q Consensus 91 s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i 170 (592)
+++++.+++.|++.|++.+...+...+++.|.+|+++|++.+++.+....+|..+++... ..+. ..+||++|++.++
T Consensus 96 ~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~--g~l~-~~g~~~~f~~~~~ 172 (400)
T PRK11646 96 AHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLG--SWLL-QYDFRLVCATGAV 172 (400)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH-HhhHHHHHHHHHH
Confidence 999999999999999999988888899999999999999999999999999999985443 3333 5699999998887
Q ss_pred HHHHHHHHHHhhccCC
Q 007702 171 PALLYFAFAVFFLPES 186 (592)
Q Consensus 171 ~~~~~~~l~~~~~pEs 186 (592)
..++..++..+++||.
T Consensus 173 ~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 173 LFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHhCCcc
Confidence 7666555555666763
No 64
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.61 E-value=4.6e-14 Score=150.22 Aligned_cols=150 Identities=17% Similarity=0.126 Sum_probs=137.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHH
Q 007702 1 MNGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVL 80 (592)
Q Consensus 1 m~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l 80 (592)
|++.-..++.+.++.++.+.....+++.+|.+.+++|.+..+.|++.+.+.++..+++++.|+++||+|||+++..+.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~ 80 (381)
T PRK03633 1 MSTYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLI 80 (381)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 55555567777788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHH
Q 007702 81 YFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV 150 (592)
Q Consensus 81 ~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~ 150 (592)
.+++.++++++++++.++++|+++|++.+...+.....+.+..|+++|++.++..+....+|..+++.+.
T Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 150 (381)
T PRK03633 81 FAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLV 150 (381)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998888888888999999999999999999999998885443
No 65
>PRK10054 putative transporter; Provisional
Probab=99.61 E-value=5.6e-14 Score=150.53 Aligned_cols=171 Identities=12% Similarity=0.151 Sum_probs=142.5
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhh
Q 007702 13 IGNFLQGWDNATIAGAI-VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS 91 (592)
Q Consensus 13 l~~~~~g~~~~~~~~~~-~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s 91 (592)
++.++..+......+.+ +++++++|++..+.+++.+.+.++..+++++.|+++||+|||++++++.++..++.++..++
T Consensus 14 ~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~ 93 (395)
T PRK10054 14 ASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV 93 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH
Confidence 34455555555655544 46778999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHH
Q 007702 92 PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIP 171 (592)
Q Consensus 92 ~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~ 171 (592)
++++.+++.|++.|.+.+...+....+..|.+|+++|++..++......+|..+++.+.... . ..+|+.+|.+.++.
T Consensus 94 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l--~-~~g~~~~f~~~~~~ 170 (395)
T PRK10054 94 NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLL--V-MQSINLPFWLAAIC 170 (395)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH--H-HhccCcHHHHHHHH
Confidence 99999999999999888888888999999999999999999999999999999885554332 2 25899999988777
Q ss_pred HHHHHHHHHhhccCC
Q 007702 172 ALLYFAFAVFFLPES 186 (592)
Q Consensus 172 ~~~~~~l~~~~~pEs 186 (592)
.++..++..+++|+.
T Consensus 171 ~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 171 SAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHHHHHHHhcc
Confidence 766555555666665
No 66
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.61 E-value=9.1e-14 Score=149.81 Aligned_cols=180 Identities=13% Similarity=0.006 Sum_probs=145.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHH
Q 007702 7 VAIAATIGNFLQGWDNATIAGAIVYIKK-DLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG 85 (592)
Q Consensus 7 ~~~~~~l~~~~~g~~~~~~~~~~~~i~~-~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~ 85 (592)
.+....++.++.......+++..+.+.+ +++++.++.+++.+++.+++.+..++.|++.||+|.|+++.++.++..+.+
T Consensus 35 ~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~ 114 (462)
T PRK15034 35 NLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPC 114 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 4445566666666777788888888766 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhh-----ccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhH---h--
Q 007702 86 LVMLWS-----PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMS---L-- 155 (592)
Q Consensus 86 ~~~~~s-----~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~---~-- 155 (592)
+..+++ ++++.+++.|++.|++ |..++.....+++++|+++||+++++......+|..++..+..... +
T Consensus 115 ~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~ 193 (462)
T PRK15034 115 VWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFA 193 (462)
T ss_pred HHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 999987 8999999999999998 7788889999999999999999999997666666654433221100 0
Q ss_pred -----------cCCCchhHHHHHHHHHHHHHHHHHHhhccCCh
Q 007702 156 -----------LASPSWRLMLGVLSIPALLYFAFAVFFLPESP 187 (592)
Q Consensus 156 -----------~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP 187 (592)
.+..+||..+++..++.++..++.++++++.|
T Consensus 194 ~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~ 236 (462)
T PRK15034 194 FLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIA 236 (462)
T ss_pred HhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 01345888888888777776666677777654
No 67
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.60 E-value=3.4e-14 Score=147.47 Aligned_cols=168 Identities=27% Similarity=0.409 Sum_probs=150.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHH
Q 007702 10 AATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML 89 (592)
Q Consensus 10 ~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~ 89 (592)
.+.++.+..+++.....+..+.+.++++.+..+.+++.+...++..++.++.|+++||+|||+.++++.++..++.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence 45567778888888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHH
Q 007702 90 WSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLS 169 (592)
Q Consensus 90 ~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~ 169 (592)
++++++.+++.|++.|++.+...+....++.|++|+++|++.+++.+....+|..+++... ....+..+||+.+++.+
T Consensus 83 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~ 160 (352)
T cd06174 83 FASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLG--GLLAESLGWRWLFLILA 160 (352)
T ss_pred HhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHH--HHHHHHhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999985443 44445567999999888
Q ss_pred HHHHHHHHHH
Q 007702 170 IPALLYFAFA 179 (592)
Q Consensus 170 i~~~~~~~l~ 179 (592)
++.++..++.
T Consensus 161 ~~~~~~~~~~ 170 (352)
T cd06174 161 ILGLLLALLL 170 (352)
T ss_pred HHHHHHHHHH
Confidence 8777655443
No 68
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.60 E-value=7.2e-14 Score=148.41 Aligned_cols=177 Identities=15% Similarity=0.236 Sum_probs=147.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchH-HHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHH
Q 007702 7 VAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTV-EGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG 85 (592)
Q Consensus 7 ~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~-~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~ 85 (592)
..+.+|+-.|+.-+ ....+.+.|++.+++|++..+ .|.+.++++.++++..++.|+++||+|.|+++.++.+..++.+
T Consensus 28 ~~~~lC~fGF~~e~-R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t 106 (511)
T TIGR00806 28 LVLYLCFYGFMAQF-RPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVW 106 (511)
T ss_pred HHHHHHHHHHHHHh-hchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 33434444444444 455667888999999999998 9999999999999999999999999999999999999999999
Q ss_pred HHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHH
Q 007702 86 LVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLML 165 (592)
Q Consensus 86 ~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f 165 (592)
++.++++++..+.+.|++.|++.|... ....|+..++|+++|++++++...+..+|.++++.+.-. ....+||..+
T Consensus 107 ~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql---l~s~gWr~y~ 182 (511)
T TIGR00806 107 LLLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL---LVTLGWISYS 182 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhcCchhHH
Confidence 999999999999999999999999999 999999999999999999999999999999999655544 2345888765
Q ss_pred HH--HHHHHHHHHHHHHhhccCChh
Q 007702 166 GV--LSIPALLYFAFAVFFLPESPR 188 (592)
Q Consensus 166 ~i--~~i~~~~~~~l~~~~~pEsP~ 188 (592)
.+ .++.+.++.++.-+++|..++
T Consensus 183 ~Ln~Isl~s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 183 TLNIISLVFMTFSVFLALFLKRPKR 207 (511)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCch
Confidence 32 333444445566788885554
No 69
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.58 E-value=5.7e-15 Score=166.88 Aligned_cols=180 Identities=16% Similarity=0.175 Sum_probs=150.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHH
Q 007702 6 LVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG 85 (592)
Q Consensus 6 ~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~ 85 (592)
+.++.+++..+..+...+.++..++.++++|++++.+.|++.+.+.++++++.++.++++||+|||+.+.++.+++++++
T Consensus 33 ~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ 112 (633)
T TIGR00805 33 VFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGS 112 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHH
Confidence 34455566778888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhc---------------------------------------------------cHHHHHHHHHHHHhhhhhhhhH
Q 007702 86 LVMLWSP---------------------------------------------------NVYVLCIARLLDGFGVGLAVTL 114 (592)
Q Consensus 86 ~~~~~s~---------------------------------------------------~~~~ll~~R~l~G~~~g~~~~~ 114 (592)
+++++.+ .+..++++|+++|++.+..++.
T Consensus 113 ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~ 192 (633)
T TIGR00805 113 FLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPL 192 (633)
T ss_pred HHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhc
Confidence 9987753 2567789999999999999999
Q ss_pred HHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhc--CC------------------CchhHHHHHHHHHHHH
Q 007702 115 VPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL--AS------------------PSWRLMLGVLSIPALL 174 (592)
Q Consensus 115 ~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~--~~------------------~~Wr~~f~i~~i~~~~ 174 (592)
..+|+.|++|+++|++..++.+....+|..+++.+....... +. .+|+..|++.+++.++
T Consensus 193 ~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l 272 (633)
T TIGR00805 193 GISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALL 272 (633)
T ss_pred CchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999987665433211 10 0388889888888777
Q ss_pred HHHHHHhhccCC
Q 007702 175 YFAFAVFFLPES 186 (592)
Q Consensus 175 ~~~l~~~~~pEs 186 (592)
..++ ++++|+.
T Consensus 273 ~~v~-l~~~p~~ 283 (633)
T TIGR00805 273 TSIP-FFFFPKA 283 (633)
T ss_pred HHHH-HHhCccc
Confidence 5544 4556654
No 70
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.58 E-value=5e-14 Score=153.74 Aligned_cols=178 Identities=15% Similarity=0.081 Sum_probs=142.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHH
Q 007702 5 ALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVS 84 (592)
Q Consensus 5 ~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~ 84 (592)
|.++..+.++.+........++..++.+.+++|++..+.+++.+.+.++..++.++.|+++||+|||++++.+.++..++
T Consensus 18 w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~ 97 (455)
T TIGR00892 18 WVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLG 97 (455)
T ss_pred hHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHH
Confidence 44444444444433333445677788999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccHHHHHH-HHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhH
Q 007702 85 GLVMLWSPNVYVLCI-ARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRL 163 (592)
Q Consensus 85 ~~~~~~s~~~~~ll~-~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~ 163 (592)
+++++++++++.+++ .|++.|++.+...+....++.+++| ++|++..++.+.+..+|..+++. ....+.+..+||+
T Consensus 98 ~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~--l~~~l~~~~gwr~ 174 (455)
T TIGR00892 98 MILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAP--LNQYLFESFGWRG 174 (455)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHH--HHHHHHHHhChHH
Confidence 999999999988865 5799999998877777788889996 78999999999999998887743 3444445669999
Q ss_pred HHHHHHHHHHHHHHHHHhhccC
Q 007702 164 MLGVLSIPALLYFAFAVFFLPE 185 (592)
Q Consensus 164 ~f~i~~i~~~~~~~l~~~~~pE 185 (592)
+|++.+++.++..++.++..|+
T Consensus 175 ~f~~~~~~~~~~~v~~~~~~~~ 196 (455)
T TIGR00892 175 SFLILGGLLLHCCVCGALMRPV 196 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC
Confidence 9999888776655444444443
No 71
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.55 E-value=3.7e-13 Score=144.38 Aligned_cols=171 Identities=13% Similarity=0.061 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHH---
Q 007702 13 IGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML--- 89 (592)
Q Consensus 13 l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~--- 89 (592)
++.++.........+.++.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++..++++++.
T Consensus 20 l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~ 99 (402)
T TIGR00897 20 IGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFG 99 (402)
T ss_pred HHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 33333333333344445556688999999999999999999999999999999999999999999999988876553
Q ss_pred h-hccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHH-HHHHHHHHHhHhcCCCchhHHHHH
Q 007702 90 W-SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGM-FLAYCMVFGMSLLASPSWRLMLGV 167 (592)
Q Consensus 90 ~-s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~-~l~~~~~~~~~~~~~~~Wr~~f~i 167 (592)
+ .++++.+++.|++.|++.+...+....++.+.+|+++|++.+++.+....+|. .+++ .....+.+..+|+..++.
T Consensus 100 ~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~--~~~~~l~~~~g~~~~~~~ 177 (402)
T TIGR00897 100 LGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGS--YYSSYAIPAFGEMNTLWS 177 (402)
T ss_pred ccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhcccccchHHHHHH
Confidence 3 35788899999999999988888888889999999999999999999988886 4553 333334455675554443
Q ss_pred HHHHHHHHHHHHHhhccC
Q 007702 168 LSIPALLYFAFAVFFLPE 185 (592)
Q Consensus 168 ~~i~~~~~~~l~~~~~pE 185 (592)
.....++..++..++.++
T Consensus 178 ~~~~~~~~~~~~~~~~~~ 195 (402)
T TIGR00897 178 ALAFVLTGGVIALFSNKD 195 (402)
T ss_pred HHHHHHHHHHHHHhccCC
Confidence 333222223333444454
No 72
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.55 E-value=9.1e-14 Score=146.28 Aligned_cols=162 Identities=17% Similarity=0.183 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhc-----CchHHH-HHHHHHHHHHHHHHHhh---c
Q 007702 22 NATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL-----GRRPML-ILSSVLYFVSGLVMLWS---P 92 (592)
Q Consensus 22 ~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~-----GRK~~l-i~~~~l~~i~~~~~~~s---~ 92 (592)
...+++..|.+.+++|++.++.+++... .+...+ .+++|+++||+ ||||.+ +.+.++.+++.+..++. .
T Consensus 4 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~ 81 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPST 81 (356)
T ss_pred chhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcch
Confidence 3456778899999999999999999755 444444 89999999998 899974 66777777777777776 4
Q ss_pred cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCc--------hhHH
Q 007702 93 NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS--------WRLM 164 (592)
Q Consensus 93 ~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~--------Wr~~ 164 (592)
+++.+.+..++.+++.+...+...+++.|++|+++|++++++...+..+|.++++.+.. .+....+ ||.+
T Consensus 82 ~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~--~l~~~~g~~~~~~~~wr~~ 159 (356)
T TIGR00901 82 DLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLAL--VLASPEFANTGLITLWGYI 159 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHH--HHhhhcccccccccccHHH
Confidence 56667777788888888888889999999999999999999999999999998855443 3333334 9999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCh
Q 007702 165 LGVLSIPALLYFAFAVFFLPESP 187 (592)
Q Consensus 165 f~i~~i~~~~~~~l~~~~~pEsP 187 (592)
|++.+++.++..++.++..||++
T Consensus 160 f~i~ai~~l~~~~~~~~~~~e~~ 182 (356)
T TIGR00901 160 FFWTALLILPGLLVTLFLAKEPQ 182 (356)
T ss_pred HHHHHHHHHHHHHHHHHhccCCC
Confidence 99888877775555455578753
No 73
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.54 E-value=1.1e-13 Score=150.35 Aligned_cols=184 Identities=19% Similarity=0.155 Sum_probs=159.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHH
Q 007702 5 ALVAIAATIGNFLQGWDNATIAGAI-VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (592)
Q Consensus 5 ~~~~~~~~l~~~~~g~~~~~~~~~~-~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i 83 (592)
+.++..++..++....+...++.+. .-+.++.+....+.+.+.+++.++++++.++++.+.||++-.+.+..+.++.++
T Consensus 44 l~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~ 123 (495)
T KOG2533|consen 44 LFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGL 123 (495)
T ss_pred HHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHH
Confidence 4455566666666666665554432 225688888889999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHh----cCCC
Q 007702 84 SGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL----LASP 159 (592)
Q Consensus 84 ~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~----~~~~ 159 (592)
.+++..+.+|++.+++.|++.|+..+..+|....+++.++.+++||..++++.....+|..++.++.++... ....
T Consensus 124 ~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~ 203 (495)
T KOG2533|consen 124 FGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLA 203 (495)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcC
Confidence 998888899999999999999999999999999999999999999999999999999999999877777433 3356
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhccCChh
Q 007702 160 SWRLMLGVLSIPALLYFAFAVFFLPESPR 188 (592)
Q Consensus 160 ~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~ 188 (592)
+|||+|++.++++++..+++++++|+.|.
T Consensus 204 gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 204 GWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred CceeehhHHHHHHHHHHheEEEEecCChh
Confidence 99999999999999999999999999987
No 74
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.53 E-value=4.3e-13 Score=147.74 Aligned_cols=168 Identities=20% Similarity=0.265 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHh
Q 007702 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW 90 (592)
Q Consensus 11 ~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~ 90 (592)
.++......+.....+..++++..++|-+ ....|+.+...++..++.++.|.++|.+|||..++.+.++..+++++++.
T Consensus 49 ~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~at 127 (599)
T PF06609_consen 49 FSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCAT 127 (599)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhc
Confidence 33334444455555567788999999965 66789999999999999999999999999999999999999999999999
Q ss_pred hccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHH
Q 007702 91 SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSI 170 (592)
Q Consensus 91 s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i 170 (592)
++|...++++-.+.|++.|... +....++|+.|.|.|+...++...........+ +...-.+..+.+|||.|++..+
T Consensus 128 A~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~--~~ia~~~~~~~~WRw~~~~~~i 204 (599)
T PF06609_consen 128 AQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWIS--PLIAQLFAAHSGWRWIFYIFII 204 (599)
T ss_pred CCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhccc--HHHHHHhccCCCcchHHHHHHH
Confidence 9999999999999999987775 456668999999999877666554433333233 2222233446799999998888
Q ss_pred HHHHHHHHHHhh
Q 007702 171 PALLYFAFAVFF 182 (592)
Q Consensus 171 ~~~~~~~l~~~~ 182 (592)
...+.+++.+++
T Consensus 205 ~~~i~~vl~~~f 216 (599)
T PF06609_consen 205 WSGIALVLIFFF 216 (599)
T ss_pred HHHHHHHHHHHH
Confidence 776655544433
No 75
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.52 E-value=2.5e-13 Score=147.22 Aligned_cols=154 Identities=21% Similarity=0.354 Sum_probs=138.4
Q ss_pred HHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhc--cHHHHHHHHHHHHhhhhhh
Q 007702 34 KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP--NVYVLCIARLLDGFGVGLA 111 (592)
Q Consensus 34 ~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~--~~~~ll~~R~l~G~~~g~~ 111 (592)
.+|+++..+.+++.+.++.|+++++++.|+++||+|-|+++.++.++.++++++..++- +++.+++.|+++|++.|..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence 46888889999999999999999999999999999999999999999999999998874 5567899999999999999
Q ss_pred hhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCC-CchhHHHHHHHHHHHHHHHHHHhhccCChhH
Q 007702 112 VTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLAS-PSWRLMLGVLSIPALLYFAFAVFFLPESPRW 189 (592)
Q Consensus 112 ~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~-~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~ 189 (592)
+|+...+.+.++|+++|++..++...+..+|.+++ +...+.+.+. .||+.+|++.++.+++..++.+++..|+|..
T Consensus 146 ~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~--mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~ 222 (466)
T KOG2532|consen 146 FPAIGSILAKWAPPNERSTFIAILTAGSQLGTIIT--MPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK 222 (466)
T ss_pred HhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHH--HHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999998888888887 4445555555 8999999999999999888877888888875
No 76
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.51 E-value=6.5e-13 Score=146.01 Aligned_cols=161 Identities=12% Similarity=0.094 Sum_probs=131.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhh-cCchHHHHHHHHHHHHHH
Q 007702 8 AIAATIGNFLQGWDNATIAG-AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW-LGRRPMLILSSVLYFVSG 85 (592)
Q Consensus 8 ~~~~~l~~~~~g~~~~~~~~-~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr-~GRK~~li~~~~l~~i~~ 85 (592)
++.+++..+...+....+.+ ...++++++|++....+++.+.+.+...+..+++|+++|| +|||++++++.+++.++.
T Consensus 16 ~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~ 95 (489)
T PRK10207 16 FFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGY 95 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHH
Confidence 34444455555555554444 4556788999999999999999998888889999999999 999999999999999999
Q ss_pred HHHHhhccHHH-HHHHHHHHHhhhhhhhhHHHHHHHhhcCccc--cchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchh
Q 007702 86 LVMLWSPNVYV-LCIARLLDGFGVGLAVTLVPLYISETAPSEI--RGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (592)
Q Consensus 86 ~~~~~s~~~~~-ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~--Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr 162 (592)
++++++++... ++++|+++|++.|...+...++++|.+|+++ |+...++...+.++|.++++ ..+..+.+..|||
T Consensus 96 ~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~--~l~g~l~~~~gw~ 173 (489)
T PRK10207 96 FMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISL--SLAPVIADKFGYS 173 (489)
T ss_pred HHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHH--HHHHHHHHhhChH
Confidence 99999876444 5589999999999999999999999999874 47788889999999999884 4445555667999
Q ss_pred HHHHHHHH
Q 007702 163 LMLGVLSI 170 (592)
Q Consensus 163 ~~f~i~~i 170 (592)
+.|++..+
T Consensus 174 ~~F~i~~i 181 (489)
T PRK10207 174 VTYNLCGA 181 (489)
T ss_pred HHHHHHHH
Confidence 99988644
No 77
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.50 E-value=4.9e-13 Score=144.06 Aligned_cols=173 Identities=16% Similarity=0.159 Sum_probs=140.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHh--
Q 007702 13 IGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW-- 90 (592)
Q Consensus 13 l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~-- 90 (592)
++.+...+......+.+|.+.++++.+..+.+++.+.+.++..+++++.|+++||+|||++++++.++..++.+..++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~ 103 (417)
T PRK10489 24 IARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNA 103 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHH
Confidence 345556666677778888888999989999999999999999999999999999999999999988877776654432
Q ss_pred ---hccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHH
Q 007702 91 ---SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGV 167 (592)
Q Consensus 91 ---s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i 167 (592)
.++++.+++.|++.|++.+...+....++.|..|+++|++..++.+....+|..+++.+. ..+.+..+|++.|++
T Consensus 104 ~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~--g~l~~~~~~~~~~~~ 181 (417)
T PRK10489 104 FLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALG--GLLIAAGGVAWNYGL 181 (417)
T ss_pred HcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHH--HHHHHHHhhHHHHHH
Confidence 567889999999999999988888889999999999999999999999999998885443 333344589999887
Q ss_pred HHHHHHHHHHHHHhhccCChh
Q 007702 168 LSIPALLYFAFAVFFLPESPR 188 (592)
Q Consensus 168 ~~i~~~~~~~l~~~~~pEsP~ 188 (592)
.++..++.. +..+.+|++|+
T Consensus 182 ~~~~~~~~~-~~~~~l~~~~~ 201 (417)
T PRK10489 182 AAAGTFITL-LPLLRLPALPP 201 (417)
T ss_pred HHHHHHHHH-HHHHhCCCCCC
Confidence 776665543 44567787654
No 78
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.50 E-value=6.1e-13 Score=161.29 Aligned_cols=164 Identities=12% Similarity=0.046 Sum_probs=126.2
Q ss_pred HHHHHHHHHHcCCCc--hHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHH---hhccHHHHHHH
Q 007702 26 AGAIVYIKKDLNLGT--TVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML---WSPNVYVLCIA 100 (592)
Q Consensus 26 ~~~~~~i~~~~~~s~--~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~---~s~~~~~ll~~ 100 (592)
..+.+.+..+++.+. ...+++.+++.++.+++++++|+++||+|||++++++.++.+++.++.. ++++++.++++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 109 (1146)
T PRK08633 30 ILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAV 109 (1146)
T ss_pred HHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 344455666777654 4578999999999999999999999999999999999877666655444 35789999999
Q ss_pred HHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcC-------CCchhHHHHHHHHHHH
Q 007702 101 RLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA-------SPSWRLMLGVLSIPAL 173 (592)
Q Consensus 101 R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~-------~~~Wr~~f~i~~i~~~ 173 (592)
|++.|++.+...++..++++|++|+++|++++++.+.+..+|.++++.+........ ..+|++.+.+..+..+
T Consensus 110 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (1146)
T PRK08633 110 TFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVA 189 (1146)
T ss_pred HHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999866554332210 1245555544444444
Q ss_pred HHHHHHHhhccCChhH
Q 007702 174 LYFAFAVFFLPESPRW 189 (592)
Q Consensus 174 ~~~~l~~~~~pEsP~~ 189 (592)
+..++..+++||+|.+
T Consensus 190 ~~~~~~~~~~~~~~~~ 205 (1146)
T PRK08633 190 VLGLIFAYRLPKVPAA 205 (1146)
T ss_pred HHHHHHHhcCcCCCCC
Confidence 4344555677888754
No 79
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.49 E-value=6.1e-13 Score=139.98 Aligned_cols=149 Identities=19% Similarity=0.309 Sum_probs=125.7
Q ss_pred HHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Q 007702 23 ATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARL 102 (592)
Q Consensus 23 ~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~ 102 (592)
..+++.+|.+.+++|++.++.+++.+++.++..++.++.|+++||+|||++++++.++..++.+.+ .+++++.+++.|+
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~ 95 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTA 95 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHH
Confidence 456778999999999999999999999999999999999999999999999999999888888777 7789999999999
Q ss_pred HHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHH
Q 007702 103 LDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPAL 173 (592)
Q Consensus 103 l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~ 173 (592)
+.|++.+...+..+.++.|.+| ++|++.+++.+....+|..+++.+..........+||+.|.+.+++.+
T Consensus 96 ~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~ 165 (355)
T TIGR00896 96 LIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPAL 165 (355)
T ss_pred HHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 9999999988888888999886 689999999999888888887554332221112349999876665443
No 80
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.48 E-value=3.5e-13 Score=120.54 Aligned_cols=138 Identities=31% Similarity=0.450 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCcc
Q 007702 47 VAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSE 126 (592)
Q Consensus 47 ~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~ 126 (592)
.+.+.++..++.++.|++.||+|||+.+..+.++..++.+...++++++.+++.+++.|++.+...+....++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 34567888999999999999999999999999999999988888899999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhccCC
Q 007702 127 IRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (592)
Q Consensus 127 ~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEs 186 (592)
+|++..++.+....+|..+++.. .....+..+|++.+++.+++.++..++.+++.||+
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPL--GGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHh--HHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 99999999999999999888543 34445667899999888888777666666677764
No 81
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.48 E-value=1.5e-12 Score=142.86 Aligned_cols=164 Identities=9% Similarity=0.084 Sum_probs=138.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHH--cCCCchHHHHHHHHHHHHHHHHHhhHHhhhhh-cCchHHHHHHHHHHHHH
Q 007702 9 IAATIGNFLQGWDNATIAGAIVY-IKKD--LNLGTTVEGLVVAMSLIGATAITTCSGPISDW-LGRRPMLILSSVLYFVS 84 (592)
Q Consensus 9 ~~~~l~~~~~g~~~~~~~~~~~~-i~~~--~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr-~GRK~~li~~~~l~~i~ 84 (592)
..+.+..+...+....+.+.+|. +.++ +|++..+.+++.+.+.++..++++++|+++|| +|||++++++.++++++
T Consensus 13 ~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g 92 (475)
T TIGR00924 13 FTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLG 92 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHH
Confidence 44445666666666666666655 4555 89999999999999999999999999999999 89999999999999999
Q ss_pred HHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccc---cchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCch
Q 007702 85 GLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEI---RGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSW 161 (592)
Q Consensus 85 ~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~---Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~W 161 (592)
.++.+++++++.++++|++.|++.|...+....++++.+|+++ |+...++.+.+.++|..+++.+ .....+..+|
T Consensus 93 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l--~g~l~~~~g~ 170 (475)
T TIGR00924 93 HFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLL--AGVIAENYGY 170 (475)
T ss_pred HHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHH--HHHHHHhcCh
Confidence 9999999999999999999999999999999999999999764 8889999999999999999544 4444556689
Q ss_pred hHHHHHHHHHHHH
Q 007702 162 RLMLGVLSIPALL 174 (592)
Q Consensus 162 r~~f~i~~i~~~~ 174 (592)
++.|++.++..++
T Consensus 171 ~~~f~~~~~~~~~ 183 (475)
T TIGR00924 171 HVGFNLAAVGMVI 183 (475)
T ss_pred HHHHHHHHHHHHH
Confidence 9999887755444
No 82
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.46 E-value=4.6e-12 Score=135.51 Aligned_cols=176 Identities=19% Similarity=0.189 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCchHHHHHHHHH-HHHHHHHHhhHHhhhhhcCchHHHH-HHHHHHHHHH
Q 007702 9 IAATIGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMS-LIGATAITTCSGPISDWLGRRPMLI-LSSVLYFVSG 85 (592)
Q Consensus 9 ~~~~l~~~~~g~~~~~~~~~~~~-i~~~~~~s~~~~gli~s~~-~lg~~ig~~~~G~l~Dr~GRK~~li-~~~~l~~i~~ 85 (592)
....++.++.+.......+.++. ++++++++.++.|++.+.. .++..++.++.++ +||+|||+.++ .+.++..++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~ 96 (393)
T PRK15011 18 TAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLAC 96 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHH
Confidence 34455567777777766776654 7889999999999997765 4466666666666 99999998754 5556666777
Q ss_pred HHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCcccc--chhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhH
Q 007702 86 LVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIR--GRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRL 163 (592)
Q Consensus 86 ~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~R--g~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~ 163 (592)
++.+++++++.+++.+.+.|...+...+....++.+..|++.| +..+++.+.+.++|..++ +..+..+.+..|||.
T Consensus 97 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g--~~i~~~l~~~~gw~~ 174 (393)
T PRK15011 97 TLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIG--PPLAYALAMGFSFTV 174 (393)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHh--hHHHHHHHHhcChHH
Confidence 7788899998877665555544556677778888888777655 345577888888999988 444445555679999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCh
Q 007702 164 MLGVLSIPALLYFAFAVFFLPESP 187 (592)
Q Consensus 164 ~f~i~~i~~~~~~~l~~~~~pEsP 187 (592)
+|++.++..++..++.++++||.|
T Consensus 175 ~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 175 MYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhcCccC
Confidence 999888887776767677788875
No 83
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.46 E-value=9.8e-13 Score=133.88 Aligned_cols=147 Identities=22% Similarity=0.175 Sum_probs=116.3
Q ss_pred CchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHH
Q 007702 39 GTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLY 118 (592)
Q Consensus 39 s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~ 118 (592)
+..-.|++-+.+.++..+.++.+|.++|++|||+++++|++..+++.++.+++.|+..++++|++.|+..|-. .+.-++
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl-~v~rAi 144 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNL-SVIRAI 144 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch-HHHHHH
Confidence 4467899999999999999999999999999999999999999999999999999977777799999988765 677899
Q ss_pred HHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHH----HHHHHHHHHHHHHHHhhccCC
Q 007702 119 ISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLML----GVLSIPALLYFAFAVFFLPES 186 (592)
Q Consensus 119 i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f----~i~~i~~~~~~~l~~~~~pEs 186 (592)
++|++++|.|++.++.......+|.++|+.++..........=+++| ++..+++........+++|||
T Consensus 145 isdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpET 216 (451)
T KOG2615|consen 145 ISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPET 216 (451)
T ss_pred HHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 99999999999999999999999999996655443331111112222 222233332233456789998
No 84
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.45 E-value=9.4e-12 Score=137.17 Aligned_cols=174 Identities=17% Similarity=0.180 Sum_probs=138.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhc-----CchHH-HHHHHHHHHH
Q 007702 10 AATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL-----GRRPM-LILSSVLYFV 83 (592)
Q Consensus 10 ~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~-----GRK~~-li~~~~l~~i 83 (592)
.+.+..+..|......++.+|.+.++.|.+..+.+.+ +...+.. ++.+++|+++||+ |||+. ++++.++.++
T Consensus 16 ~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~ 93 (491)
T PRK11010 16 ILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLV 93 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHH
Confidence 4455566778888888899999999999998888886 3333333 6889999999999 99986 6677777777
Q ss_pred HHHHHHhh---ccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcC-CC
Q 007702 84 SGLVMLWS---PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA-SP 159 (592)
Q Consensus 84 ~~~~~~~s---~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~-~~ 159 (592)
+.+.+++. .+++.+.+.+++.|++.+...+...+++.|++|+++|++.+++.+.+..+|.+++..+. ..+.+ ..
T Consensus 94 ~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~--~~l~~~~~ 171 (491)
T PRK11010 94 AIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLA--LWLADRYL 171 (491)
T ss_pred HHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHH--HHHHhccc
Confidence 77777665 47888999999999999999999999999999999999999999999999999884443 33344 46
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhccCChh
Q 007702 160 SWRLMLGVLSIPALLYFAFAVFFLPESPR 188 (592)
Q Consensus 160 ~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~ 188 (592)
+||.+|++.+++.++.++ ..+++||+|+
T Consensus 172 GWr~~f~i~a~l~ll~~l-~~~~~~e~~~ 199 (491)
T PRK11010 172 GWQGMYWLMAALLIPCII-ATLLAPEPTD 199 (491)
T ss_pred CHHHHHHHHHHHHHHHHH-HHHhcCCCcc
Confidence 999999998887766544 3445788764
No 85
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.45 E-value=1.5e-12 Score=135.01 Aligned_cols=181 Identities=19% Similarity=0.218 Sum_probs=149.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHH
Q 007702 5 ALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVS 84 (592)
Q Consensus 5 ~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~ 84 (592)
...+....+......+.+..+++..+.+++++++|+.+.++++++..+...+.-++.|++.||+|.|++..++.++..+.
T Consensus 13 ~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP 92 (417)
T COG2223 13 RRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIP 92 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHH
Confidence 34444555555555666777888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhc---cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCc-
Q 007702 85 GLVMLWSP---NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS- 160 (592)
Q Consensus 85 ~~~~~~s~---~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~- 160 (592)
++..+++. +++++++.+++.|++.+ ..++...+++.++|++++|.++++.. .+++|..+..... .......+
T Consensus 93 ~~~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~--P~v~~~~g~ 168 (417)
T COG2223 93 CLGLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVA--PLVAVAFGF 168 (417)
T ss_pred HHHHHHHccCCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHH--HHHHHHHhh
Confidence 99999874 45699999999999754 45778889999999999999999988 7777776653332 22222334
Q ss_pred --hhHHHHHHHHHHHHHHHHHHhhccCChhH
Q 007702 161 --WRLMLGVLSIPALLYFAFAVFFLPESPRW 189 (592)
Q Consensus 161 --Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~ 189 (592)
|+....+..++.++..++.++++.+.|..
T Consensus 169 ~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~ 199 (417)
T COG2223 169 LAWRNVAGIYVVALAIAAVLAWLGMNDVPEH 199 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCChhh
Confidence 99999888888888888888999888875
No 86
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.44 E-value=1.3e-11 Score=132.49 Aligned_cols=173 Identities=17% Similarity=0.131 Sum_probs=140.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhc-----CchH-HHHHHHHHHHHHH
Q 007702 12 TIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL-----GRRP-MLILSSVLYFVSG 85 (592)
Q Consensus 12 ~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~-----GRK~-~li~~~~l~~i~~ 85 (592)
..-++.+|+..+.....+|.+-++.|++.++.|++..+... .+..+++|+++||+ |||| .++++.++.+++.
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~ 82 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASI 82 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHH
Confidence 44577889999999999999999999999999999777765 68899999999999 8876 6888888888877
Q ss_pred HHHHhh---ccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCC-Cch
Q 007702 86 LVMLWS---PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLAS-PSW 161 (592)
Q Consensus 86 ~~~~~s---~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~-~~W 161 (592)
+..++. .+++.+++..++.+++.+...+...+++.|++|+++|++.+++...+..+|..++..+. ..+.+. .+|
T Consensus 83 ~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~--~~l~~~~~gw 160 (402)
T PRK11902 83 AAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLA--LWLADRVLGW 160 (402)
T ss_pred HHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHH--HHHHhcccCH
Confidence 777776 35777888888888888888899999999999999999999999999899988884433 333343 599
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCChhH
Q 007702 162 RLMLGVLSIPALLYFAFAVFFLPESPRW 189 (592)
Q Consensus 162 r~~f~i~~i~~~~~~~l~~~~~pEsP~~ 189 (592)
|.+|++.++..++..+ ..+++||+++.
T Consensus 161 ~~~f~i~a~~~l~~~l-~~~~~~e~~~~ 187 (402)
T PRK11902 161 GNTYLLMAGLMLAGAL-TTLWAPEPEVP 187 (402)
T ss_pred HHHHHHHHHHHHHHHH-HHHhcCCCccc
Confidence 9999988887766443 45677887553
No 87
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.41 E-value=4.7e-13 Score=136.95 Aligned_cols=149 Identities=21% Similarity=0.248 Sum_probs=137.6
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHH
Q 007702 36 LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLV 115 (592)
Q Consensus 36 ~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~ 115 (592)
.+-++++.|++.++..+..++..++.|.+.||+|+|-+++++.+++.++++++++.+++++++++|.++|++.+...+..
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSG 180 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhh
Confidence 44456899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCccc-cchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhccCC
Q 007702 116 PLYISETAPSEI-RGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (592)
Q Consensus 116 ~~~i~E~~p~~~-Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEs 186 (592)
.+++++.+|.+. |++.+|....+.++|.+++ +.+++.+.+..|.+.+|.+.+++.++-..+.++.++.+
T Consensus 181 lamlAd~f~~d~er~~vmGialgfislG~lvg--PpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~ 250 (464)
T KOG3764|consen 181 LAMLADVFPEDNERGSVMGIALGFISLGVLVG--PPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPT 250 (464)
T ss_pred HHHHHHHcccchhhhHHHHHHHHHHhccceec--CCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcc
Confidence 999999999875 7999999999999999999 77788888888999999999999998887777777654
No 88
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.39 E-value=3.1e-11 Score=137.63 Aligned_cols=139 Identities=16% Similarity=0.029 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhc
Q 007702 44 GLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETA 123 (592)
Q Consensus 44 gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~ 123 (592)
.+...+..++.+++.+++|+++||+|||++++++.++.++++++.+++++...+++.+++.|++.++..++..++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34456677889999999999999999999999999999999999999988888888899999988888899999999999
Q ss_pred CccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhccCC
Q 007702 124 PSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (592)
Q Consensus 124 p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEs 186 (592)
|++.|++++++.+....+|.++++.+..... . .+...+|++.+++.++.+++ .+++||+
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~--~-~~~~~pf~i~a~~lll~~ll-~~~LPET 736 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFV--G-ITKAAPILFASAALACGGLL-ALKLPDT 736 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H-hhhHHHHHHHHHHHHHHHHH-HHhCCCC
Confidence 9999999999999999999999965543222 1 13466777777766664444 4567998
No 89
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.37 E-value=2.6e-11 Score=129.19 Aligned_cols=158 Identities=14% Similarity=0.038 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHH-HHHHHH-HHH
Q 007702 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSV-LYFVSG-LVM 88 (592)
Q Consensus 11 ~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~-l~~i~~-~~~ 88 (592)
+++.++......++..|.+|.+.+++|++..+.+++.+++.++..+++++.|+++||+||++....... ...+.. +..
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~ 88 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFS 88 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 556777777888889999999999999999999999999999999999999999999998554322221 111222 233
Q ss_pred HhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHH
Q 007702 89 LWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVL 168 (592)
Q Consensus 89 ~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~ 168 (592)
.++++++.+++.|++.|.+.+...|....+..+. .++|++..+......++|..+++ .....+.+..+||..|++.
T Consensus 89 ~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~--~l~g~l~~~~g~~~~f~~~ 164 (382)
T TIGR00902 89 AGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGS--ALFGGLIGMFDEQNILAIL 164 (382)
T ss_pred HhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHH--HHHHHHHHHcChhHHHHHH
Confidence 4678999999999999998888888887777664 57789999999999999999884 4444555667999999877
Q ss_pred HHHH
Q 007702 169 SIPA 172 (592)
Q Consensus 169 ~i~~ 172 (592)
.+..
T Consensus 165 ~~~~ 168 (382)
T TIGR00902 165 TAGL 168 (382)
T ss_pred HHHH
Confidence 6553
No 90
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.35 E-value=4.5e-11 Score=131.99 Aligned_cols=163 Identities=14% Similarity=0.168 Sum_probs=125.7
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhh-cCchHHHHHHHHHHHHHHHH
Q 007702 10 AATIGNFLQGWDNATIAG-AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW-LGRRPMLILSSVLYFVSGLV 87 (592)
Q Consensus 10 ~~~l~~~~~g~~~~~~~~-~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr-~GRK~~li~~~~l~~i~~~~ 87 (592)
.+++..+...+....+.. ...++.+++|++..+.+++.+.+........+++|+++|| +|||++++++.+++.++.++
T Consensus 25 ~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l 104 (500)
T PRK09584 25 LIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYAL 104 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 334444445454444444 4456778999999888888888776666667899999999 59999999999999999988
Q ss_pred HHhhc-cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccc--cchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHH
Q 007702 88 MLWSP-NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEI--RGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLM 164 (592)
Q Consensus 88 ~~~s~-~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~--Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~ 164 (592)
+++++ +.+.++++|++.|++.|...+....+++|++|++. |....++.+.+.++|.++++.+ ...+.+..+||+.
T Consensus 105 ~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i--~g~l~~~~g~~~~ 182 (500)
T PRK09584 105 VAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLA--TPWLAAKYGWSVA 182 (500)
T ss_pred HHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHH--HHHHHHhhCHHHH
Confidence 88874 56677788999999999988988899999998654 4457778888999999988544 4444566799999
Q ss_pred HHHHHHHHHH
Q 007702 165 LGVLSIPALL 174 (592)
Q Consensus 165 f~i~~i~~~~ 174 (592)
|++.++..++
T Consensus 183 F~i~~i~~~i 192 (500)
T PRK09584 183 FALSVVGMLI 192 (500)
T ss_pred HHHHHHHHHH
Confidence 9887654443
No 91
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.35 E-value=3e-11 Score=128.64 Aligned_cols=166 Identities=13% Similarity=0.039 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCch----HHHHHHHHHHHHHHHHHH
Q 007702 14 GNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRR----PMLILSSVLYFVSGLVML 89 (592)
Q Consensus 14 ~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK----~~li~~~~l~~i~~~~~~ 89 (592)
.++......+.+.|.+|.+.++++.+..+.|++.+++.++..+++++.|+++||+||| +.+.+..++. ......
T Consensus 12 ~~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~ 89 (382)
T PRK11128 12 SYFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWF 89 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHH
Confidence 3566667778888899988899999999999999999999999999999999999994 3333222222 222334
Q ss_pred hhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHH
Q 007702 90 WSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLS 169 (592)
Q Consensus 90 ~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~ 169 (592)
.+++++.+++.|++.|++.+...+...+++.++ .++|++..+..+....+|..++ +..+..+.+..+||.+|++.+
T Consensus 90 ~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~ig--p~lgg~l~~~~g~~~~f~~~~ 165 (382)
T PRK11128 90 GAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIG--SALTGKLVSWFGEQAILWILT 165 (382)
T ss_pred hcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHH--HHHHHHHHHHcChhHHHHHHH
Confidence 468899999999999999888888887777776 4568888888888888998888 444555566679999998777
Q ss_pred HHHHHHHHHHHhhccCC
Q 007702 170 IPALLYFAFAVFFLPES 186 (592)
Q Consensus 170 i~~~~~~~l~~~~~pEs 186 (592)
+..++.. +..++.||.
T Consensus 166 ~~~~~~~-~~~~~~~~~ 181 (382)
T PRK11128 166 AGVASML-LGQLLRPTI 181 (382)
T ss_pred HHHHHHH-HHHHccCCC
Confidence 6554433 334455664
No 92
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.33 E-value=1.2e-10 Score=124.62 Aligned_cols=153 Identities=16% Similarity=0.195 Sum_probs=122.1
Q ss_pred HHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhh
Q 007702 29 IVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGV 108 (592)
Q Consensus 29 ~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~ 108 (592)
..+++++++++..+.+++.+...++.+++.++.|+++||+|||+.+..+.+...+......+.++.+.+++.+++.+++.
T Consensus 240 p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 319 (393)
T PRK15011 240 PLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYI 319 (393)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 34567889999988999888888888889999999999999999888877766665555556778888888999999988
Q ss_pred hhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhccC
Q 007702 109 GLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPE 185 (592)
Q Consensus 109 g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pE 185 (592)
|...+..+.+..|.+|. +||..+++.+....+|..+++.+ .....+..+|+.+|++..++.++.+ +..+++||
T Consensus 320 g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l--~G~i~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 392 (393)
T PRK15011 320 GILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSL--AGIVAEIWNYHAVFWFALVMIIATL-FCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHH--HHHHHHHhhhHHHHHHHHHHHHHHH-HHHHhhcC
Confidence 88888888899999986 59999999888888898888544 3445556799999988777776644 44556565
No 93
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.33 E-value=3.6e-11 Score=145.85 Aligned_cols=176 Identities=14% Similarity=0.111 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCc-hHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHH---HHHHHHH
Q 007702 9 IAATIGNFLQGWDNATIAGAIV-YIKKDLNLGT-TVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLIL---SSVLYFV 83 (592)
Q Consensus 9 ~~~~l~~~~~g~~~~~~~~~~~-~i~~~~~~s~-~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~---~~~l~~i 83 (592)
+...++.+..++....+..... .+....+.+. ...++..+++.+..++.++++|.++||+|||+++.. ..++..+
T Consensus 18 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~ 97 (1140)
T PRK06814 18 WTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAA 97 (1140)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHH
Confidence 3334444544544444333333 2333443333 457888899999999999999999999999997643 2222233
Q ss_pred HHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhH
Q 007702 84 SGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRL 163 (592)
Q Consensus 84 ~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~ 163 (592)
..+...+.+++++++++|+++|++.+...|+..+++.+++|+++|++++++.+.+..+|.++++.+ ++.+....+|++
T Consensus 98 ~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l--~g~l~~~~~~~~ 175 (1140)
T PRK06814 98 LAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTII--GGLATISGNFVI 175 (1140)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHH--HHHHHhccccHH
Confidence 333333458999999999999999999999999999999999999999999999999999999544 444555679999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCh
Q 007702 164 MLGVLSIPALLYFAFAVFFLPESP 187 (592)
Q Consensus 164 ~f~i~~i~~~~~~~l~~~~~pEsP 187 (592)
.|++..+..++ .++..+++|+++
T Consensus 176 ~~~~~~~~~~~-~~~~~~~~~~~~ 198 (1140)
T PRK06814 176 LVALLMGIAVL-GWLASLFIPKTG 198 (1140)
T ss_pred HHHHHHHHHHH-HHHHHhhCCCCC
Confidence 98444444443 444556677654
No 94
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.33 E-value=6.1e-11 Score=128.03 Aligned_cols=146 Identities=13% Similarity=0.159 Sum_probs=121.1
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHhhhhhhhhHHH
Q 007702 41 TVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP----NVYVLCIARLLDGFGVGLAVTLVP 116 (592)
Q Consensus 41 ~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~----~~~~ll~~R~l~G~~~g~~~~~~~ 116 (592)
...+...++..++.+++.++.|+++||+|||++++++.++.+++..+..... +++.+++.+++.|++.+...+...
T Consensus 251 ~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~ 330 (418)
T TIGR00889 251 KNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGS 330 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678899999999999999999999999999999999999888876666532 246677889999999999889999
Q ss_pred HHHHhhcCccccchhhHHHH-HHHhhHHHHHHHHHHHhH-hcCC---CchhHHHHHHHHHHHHHHHHHHhhccCC
Q 007702 117 LYISETAPSEIRGRLNTLPQ-FTGSGGMFLAYCMVFGMS-LLAS---PSWRLMLGVLSIPALLYFAFAVFFLPES 186 (592)
Q Consensus 117 ~~i~E~~p~~~Rg~~~~~~~-~~~~~G~~l~~~~~~~~~-~~~~---~~Wr~~f~i~~i~~~~~~~l~~~~~pEs 186 (592)
.+++|.+|++.||+..++.+ +...+|..+++.+.-... .... .+|+..|.+.+++.++..++.++++||+
T Consensus 331 ~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 331 VFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999999997 567888888854443222 1111 4799999998888888888888899987
No 95
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.32 E-value=5.2e-11 Score=128.48 Aligned_cols=149 Identities=19% Similarity=0.203 Sum_probs=122.9
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHH
Q 007702 36 LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLV 115 (592)
Q Consensus 36 ~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~ 115 (592)
.+.+....+++.++..++..++.+++|+++||+|||+.+.++.++.+++.++.+++++.+.+++.+++.|++.+...+..
T Consensus 257 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 336 (420)
T PRK09528 257 PEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGV 336 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566778999999999999999999999999999999999999999988888889999999999999999998888888
Q ss_pred HHHHHhhcCccccchhhHH-HHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhccCC
Q 007702 116 PLYISETAPSEIRGRLNTL-PQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (592)
Q Consensus 116 ~~~i~E~~p~~~Rg~~~~~-~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEs 186 (592)
..++.|.+|++.|+...+. .++...+|..+++.. .+.+.+..||+.+|.+.+++.++..++.++.+++.
T Consensus 337 ~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~--~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 337 FKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTL--AGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHH--HHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 8999999999999887554 566677888887433 44555666899999988887776665655555544
No 96
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.32 E-value=1.1e-10 Score=127.31 Aligned_cols=162 Identities=15% Similarity=0.131 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhc-CchHHHHHHHHHHHHHHHHH
Q 007702 11 ATIGNFLQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL-GRRPMLILSSVLYFVSGLVM 88 (592)
Q Consensus 11 ~~l~~~~~g~~~~~~~~~~~-~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~-GRK~~li~~~~l~~i~~~~~ 88 (592)
+++..+...+....+...+| ++.+++|++..+.+.+.+.+.+...++++++|+++||+ |||++++++.++..++.++.
T Consensus 14 l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll 93 (493)
T PRK15462 14 VVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVL 93 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHH
Confidence 33344444444444444444 56778999999999999999999999999999999999 99999999999999998777
Q ss_pred Hhhc-cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCcc--ccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHH
Q 007702 89 LWSP-NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSE--IRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLML 165 (592)
Q Consensus 89 ~~s~-~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~--~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f 165 (592)
++.+ +...+.++..+.+++.|...+..+++++|.+|++ .|....++.....++|.++++.+ ...+.+..+|++.|
T Consensus 94 ~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l--~g~L~~~~Gw~~~F 171 (493)
T PRK15462 94 GASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIA--CGYAQEEYSWAMGF 171 (493)
T ss_pred HHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHH--HHHHHhhhChHHHH
Confidence 6543 2233444444555667777777788999999986 68889999999999999998544 44555667999999
Q ss_pred HHHHHHHHH
Q 007702 166 GVLSIPALL 174 (592)
Q Consensus 166 ~i~~i~~~~ 174 (592)
.+.++..++
T Consensus 172 ~iaaigm~l 180 (493)
T PRK15462 172 GLAAVGMIA 180 (493)
T ss_pred HHHHHHHHH
Confidence 876654433
No 97
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.32 E-value=1.4e-10 Score=124.07 Aligned_cols=174 Identities=18% Similarity=0.122 Sum_probs=123.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHH
Q 007702 10 AATIGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM 88 (592)
Q Consensus 10 ~~~l~~~~~g~~~~~~~~~~~~-i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~ 88 (592)
.+...+++.......+.+.+|. +.+++|.+..+.+++.+++.++..++.++.|+++||+|||+.++.+.+..+++....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~ 85 (396)
T TIGR00882 6 MFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPF 85 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 3344555555656666666654 567899999999999999999999999999999999999999998777665544322
Q ss_pred ---Hhhc-----cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCc
Q 007702 89 ---LWSP-----NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS 160 (592)
Q Consensus 89 ---~~s~-----~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~ 160 (592)
.+++ .+..+++.+++.|++.+...+....+..+..+. ++...+.......+|..+++.+. .... ..+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~g~~~g~~~~--g~l~-~~~ 160 (396)
T TIGR00882 86 FIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRN--SNFEYGKARMFGCVGWALCASIA--GILF-SID 160 (396)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhhh--cccccchhhhhcccHHHHHHHHH--hhhh-ccC
Confidence 1222 234456678888888888888888887776443 34455556666677777775442 3222 359
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccCChh
Q 007702 161 WRLMLGVLSIPALLYFAFAVFFLPESPR 188 (592)
Q Consensus 161 Wr~~f~i~~i~~~~~~~l~~~~~pEsP~ 188 (592)
||.+|++.+++.++..++.++..||+|.
T Consensus 161 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (396)
T TIGR00882 161 PQIVFWLGSGFALILMLLLMFAKPKAPS 188 (396)
T ss_pred chHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 9999998888877766555555666543
No 98
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.31 E-value=7.9e-11 Score=121.57 Aligned_cols=182 Identities=19% Similarity=0.135 Sum_probs=153.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHH
Q 007702 5 ALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVS 84 (592)
Q Consensus 5 ~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~ 84 (592)
.+..+.++.-.++.|+......+.+|.+++.|+++..+.+++...++.|+.+++++.|++.+|+|+|+.++++..+++++
T Consensus 12 ~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg 91 (422)
T COG0738 12 KLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVG 91 (422)
T ss_pred eeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 34566777788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH---hhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhc-----
Q 007702 85 GLVML---WSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL----- 156 (592)
Q Consensus 85 ~~~~~---~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~----- 156 (592)
++++. ...++..++++-++.|.|.|...+.+..|++.+.|++.-..-+++.|.+..+|..+++.+.-.....
T Consensus 92 ~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~ 171 (422)
T COG0738 92 AALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALT 171 (422)
T ss_pred HHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhc
Confidence 99885 5578999999999999999999999999999999998888899999999999999997665444331
Q ss_pred ------------CCCchhHHHHHHHHHHHHHHHHHH-hhccCC
Q 007702 157 ------------ASPSWRLMLGVLSIPALLYFAFAV-FFLPES 186 (592)
Q Consensus 157 ------------~~~~Wr~~f~i~~i~~~~~~~l~~-~~~pEs 186 (592)
....|+.+|...+...+++.+... .-.|+.
T Consensus 172 ~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~ 214 (422)
T COG0738 172 MSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDL 214 (422)
T ss_pred cCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcC
Confidence 022488888776666555443332 234554
No 99
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.29 E-value=1.8e-10 Score=119.52 Aligned_cols=163 Identities=28% Similarity=0.355 Sum_probs=138.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchH-HHHHHHHHHHHHHHHHHhh
Q 007702 14 GNFLQGWDNATIAGAIVYIKKD-LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRP-MLILSSVLYFVSGLVMLWS 91 (592)
Q Consensus 14 ~~~~~g~~~~~~~~~~~~i~~~-~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~-~li~~~~l~~i~~~~~~~s 91 (592)
..+........+....+.+.++ ++.+..+.+++.+...++..++.++.+++.||+|||+ .+.++.++..++.+...+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 262 (352)
T cd06174 183 AFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALA 262 (352)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 3444444445555555555554 4889999999999999999999999999999999999 9999999999999999999
Q ss_pred ccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHH
Q 007702 92 PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIP 171 (592)
Q Consensus 92 ~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~ 171 (592)
++.+.+.+..++.|++.+...+....++.|..|+++|++..++.+....+|..+++ .......+..+|+..+.+.+++
T Consensus 263 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~i~g~l~~~~~~~~~~~~~~~~ 340 (352)
T cd06174 263 PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGP--LLAGLLLDTGGYGGVFLILAAL 340 (352)
T ss_pred ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhcccCcchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998884 4445555677999999988888
Q ss_pred HHHHHHH
Q 007702 172 ALLYFAF 178 (592)
Q Consensus 172 ~~~~~~l 178 (592)
.++..++
T Consensus 341 ~~i~~i~ 347 (352)
T cd06174 341 ALLAALL 347 (352)
T ss_pred HHHHHHH
Confidence 7775544
No 100
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.27 E-value=3e-10 Score=124.43 Aligned_cols=162 Identities=16% Similarity=0.083 Sum_probs=118.8
Q ss_pred HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhh--cc-H-HHHHHH
Q 007702 25 IAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS--PN-V-YVLCIA 100 (592)
Q Consensus 25 ~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s--~~-~-~~ll~~ 100 (592)
.....|.+.+++|.+.....+......++.+++.++.++++||+|||+.++.+.++.+++.++.... ++ . ...+++
T Consensus 290 ~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~ 369 (479)
T PRK10077 290 VLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLS 369 (479)
T ss_pred HHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHH
Confidence 3445577778889887767777777888889999999999999999999999999988887776543 11 1 122223
Q ss_pred HHHHHhhhhh-hhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHH----hHhcCCCchhHHHHHHHHHHHHH
Q 007702 101 RLLDGFGVGL-AVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFG----MSLLASPSWRLMLGVLSIPALLY 175 (592)
Q Consensus 101 R~l~G~~~g~-~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~----~~~~~~~~Wr~~f~i~~i~~~~~ 175 (592)
-++.+++.+. ..+..+.+++|.+|+++|+..+++.+....+|.++++..... ....+..+|+..|++.++..++.
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (479)
T PRK10077 370 MLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLA 449 (479)
T ss_pred HHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHH
Confidence 3344444433 236678999999999999999999998888888776433211 12234668888888888777777
Q ss_pred HHHHHhhccCC
Q 007702 176 FAFAVFFLPES 186 (592)
Q Consensus 176 ~~l~~~~~pEs 186 (592)
+++.+++.||+
T Consensus 450 ~~~~~~~~~e~ 460 (479)
T PRK10077 450 ALFMWKFVPET 460 (479)
T ss_pred HHHHHhccccC
Confidence 77777788988
No 101
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.27 E-value=1.5e-10 Score=121.54 Aligned_cols=147 Identities=18% Similarity=0.103 Sum_probs=121.2
Q ss_pred HHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccH--HHHHHHHHH
Q 007702 26 AGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNV--YVLCIARLL 103 (592)
Q Consensus 26 ~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~--~~ll~~R~l 103 (592)
....+.+.++++.+..+.+++.+.+.++..++.++.|+++||+|||+.+.++.++..++.++..+.++. ..+++..++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (377)
T TIGR00890 225 IGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVAL 304 (377)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHH
Confidence 334455567889888889999999999999999999999999999999999999988888877776643 334566788
Q ss_pred HHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHH
Q 007702 104 DGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALL 174 (592)
Q Consensus 104 ~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~ 174 (592)
.|++.|...+..+.++.|.+|+++|++..++.+....+|..+++. ......+..+|+++|.+.+++.++
T Consensus 305 ~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~--~~g~l~~~~g~~~~f~~~~~~~~~ 373 (377)
T TIGR00890 305 VFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGL--IASHALTEIGFEYTFIVTGAFALT 373 (377)
T ss_pred HHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHH--HHHHHHhhhchhhHHHHHHHHHHH
Confidence 888888888888899999999999999999999999999988843 344455667899999877766554
No 102
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.25 E-value=3.8e-10 Score=123.63 Aligned_cols=166 Identities=17% Similarity=0.080 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHH--H
Q 007702 11 ATIGNFLQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGL--V 87 (592)
Q Consensus 11 ~~l~~~~~g~~~~~~~~~~~-~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~--~ 87 (592)
+++..+........+....| ++++++|++..+.++..+...++.+++.++.|+++||+|||+.+++...+..++.. .
T Consensus 263 ~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~ 342 (467)
T PRK09556 263 LCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGV 342 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHH
Confidence 34444444444434444455 56778999999999999999999999999999999999999887766544443332 2
Q ss_pred HHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhh-HHHHHHHHHHHhHhcC---------
Q 007702 88 MLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSG-GMFLAYCMVFGMSLLA--------- 157 (592)
Q Consensus 88 ~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~-G~~l~~~~~~~~~~~~--------- 157 (592)
....++.+.+.+.+++.|++..........+..|.+|++.||.+.++.+....+ |..+++.+. +...+
T Consensus 343 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~--G~i~~~~~~g~~~~ 420 (467)
T PRK09556 343 YQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGL--GMIADPTKNGTPIF 420 (467)
T ss_pred HHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhH--HHHhcccccccccc
Confidence 233456666777888888655444344446777999999999999999888775 656653332 22233
Q ss_pred ---CCchhHHHHHHHHHHHHHHHH
Q 007702 158 ---SPSWRLMLGVLSIPALLYFAF 178 (592)
Q Consensus 158 ---~~~Wr~~f~i~~i~~~~~~~l 178 (592)
..+|+..|.+..+..++.+++
T Consensus 421 ~~~~~~~~~~f~~~~~~~~~~~~~ 444 (467)
T PRK09556 421 GYTLTGWAGTFAALDIAAIGCICL 444 (467)
T ss_pred cccccChHHHHHHHHHHHHHHHHH
Confidence 457999998876666664433
No 103
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.25 E-value=9.4e-11 Score=126.79 Aligned_cols=169 Identities=16% Similarity=0.228 Sum_probs=129.8
Q ss_pred HHHHHHHHH-HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhh----cCch-HHHHHHHHHHHHHHHHHHhhc
Q 007702 19 GWDNATIAG-AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW----LGRR-PMLILSSVLYFVSGLVMLWSP 92 (592)
Q Consensus 19 g~~~~~~~~-~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr----~GRK-~~li~~~~l~~i~~~~~~~s~ 92 (592)
......+.+ ..+++.+++|+++...|++.++..+..++..++.|+++|| +||| +.++++.++.+++.+++.+.+
T Consensus 12 ~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~ 91 (437)
T TIGR00792 12 NFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTP 91 (437)
T ss_pred HHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCC
Confidence 333344443 5566888999999999999999999999999999999997 6874 467778888888888777765
Q ss_pred c------HHHHHHHHHHHHhhhhhhhhHHHHHHHhhc-CccccchhhHHHHHHHhhHHHHHHHHHHHhH--h---cCCCc
Q 007702 93 N------VYVLCIARLLDGFGVGLAVTLVPLYISETA-PSEIRGRLNTLPQFTGSGGMFLAYCMVFGMS--L---LASPS 160 (592)
Q Consensus 93 ~------~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~-p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~--~---~~~~~ 160 (592)
+ ...+++.+++.+++.+...+...++..|.. ++++|++..++.+.+..+|..++........ . .+..+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g 171 (437)
T TIGR00792 92 DFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFG 171 (437)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc
Confidence 3 456677788888888877777778888987 4688999999988888888766644332221 1 13568
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccCCh
Q 007702 161 WRLMLGVLSIPALLYFAFAVFFLPESP 187 (592)
Q Consensus 161 Wr~~f~i~~i~~~~~~~l~~~~~pEsP 187 (592)
||+++.+.+++.++..++.+++.||.|
T Consensus 172 ~~~~~~i~~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 172 WFMFALVLALIGVVSLIICFFGTKERY 198 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCEecC
Confidence 999999988888877777777888875
No 104
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.25 E-value=5.1e-10 Score=119.67 Aligned_cols=156 Identities=15% Similarity=0.142 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Q 007702 25 IAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLD 104 (592)
Q Consensus 25 ~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~ 104 (592)
.....+.+..+.+.+ ..++..+.+.++.+++.++.|++.||+|||+.+..+.++.+++.++..+.++.+.+++..++.
T Consensus 235 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (399)
T PRK05122 235 IATFITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALT 312 (399)
T ss_pred HHHHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 333444444455653 446667788889999999999999999999999999888888888888888888888899999
Q ss_pred HhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhcc
Q 007702 105 GFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLP 184 (592)
Q Consensus 105 G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~p 184 (592)
|++.+...+.....+.|.+|++.||+..++.+....+|..+++.+ .....+..+|+..|++.+++.++.+++.+++.+
T Consensus 313 G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~--~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 313 GFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPL--AGLVASWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999998888888888999999999999999999888888776433 334445668999998888777765555444433
No 105
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.24 E-value=4.6e-10 Score=121.98 Aligned_cols=175 Identities=13% Similarity=0.106 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhh----hcCchHHHHHH-HHHHHHHHHHH
Q 007702 14 GNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISD----WLGRRPMLILS-SVLYFVSGLVM 88 (592)
Q Consensus 14 ~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~D----r~GRK~~li~~-~~l~~i~~~~~ 88 (592)
..+..-+......+.++.+.+++|.+....+++..+..+..++.+++.|.++| |+|||+++++. .+..+++.+++
T Consensus 12 ~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll 91 (477)
T TIGR01301 12 VAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILI 91 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 33333444455555666677899999999999999999999999999999999 59999999875 55666666777
Q ss_pred HhhccHH-----------------HHHHHHHHHHhhhhhhhhHHHHHHHhhcCcccc--chhhHHHHHHHhhHHHHHHHH
Q 007702 89 LWSPNVY-----------------VLCIARLLDGFGVGLAVTLVPLYISETAPSEIR--GRLNTLPQFTGSGGMFLAYCM 149 (592)
Q Consensus 89 ~~s~~~~-----------------~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~R--g~~~~~~~~~~~~G~~l~~~~ 149 (592)
++++++. .++++-.+..++.....+...++++|.+|+++| +.+.++.+.+..+|.++++..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~ 171 (477)
T TIGR01301 92 GFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAA 171 (477)
T ss_pred HhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766542 223333344557777778888999999999876 578898889999999998776
Q ss_pred HHHhHhc-------C------CCchhHHHHHHHHHHHHHHHHHHhhccCChh
Q 007702 150 VFGMSLL-------A------SPSWRLMLGVLSIPALLYFAFAVFFLPESPR 188 (592)
Q Consensus 150 ~~~~~~~-------~------~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~ 188 (592)
....... . ..+.|..|++.++..++..++..+..+|.|.
T Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~ 223 (477)
T TIGR01301 172 GAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPL 223 (477)
T ss_pred HHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCC
Confidence 5432111 0 1267999999888888888888889999764
No 106
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.24 E-value=6.3e-10 Score=119.20 Aligned_cols=153 Identities=18% Similarity=0.085 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHH
Q 007702 24 TIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLL 103 (592)
Q Consensus 24 ~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l 103 (592)
.+....|.+.++.|.+....+++.+.+.++.+++.++.|+++||+|||+.+.++.+...++.++..+.++.+.+.+.-++
T Consensus 238 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (406)
T PRK11551 238 FLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFA 317 (406)
T ss_pred HHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 33445566777789999999999999999999999999999999999999998877777777777777888778888888
Q ss_pred HHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCC-CchhHHHHHHHHHHHHHHHH
Q 007702 104 DGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLAS-PSWRLMLGVLSIPALLYFAF 178 (592)
Q Consensus 104 ~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~-~~Wr~~f~i~~i~~~~~~~l 178 (592)
.|++.+...+..+.++.|.+|++.||+..++.+....+|..+++.+ ...+.+. .+|...+++.....++.+++
T Consensus 318 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~--~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 391 (406)
T PRK11551 318 AGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLL--AGQLLALGRSTVGVIGASIPVILVAALA 391 (406)
T ss_pred HHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhh--HhhhhccCCchHHHHHHHHHHHHHHHHH
Confidence 9998888888889999999999999999999999999999888444 3333333 35666665555555443333
No 107
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.20 E-value=2.5e-10 Score=123.71 Aligned_cols=164 Identities=18% Similarity=0.091 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHh-----hc----
Q 007702 22 NATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW-----SP---- 92 (592)
Q Consensus 22 ~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~-----s~---- 92 (592)
...+....|++.+++|.+....++......++.+++.++.|+++||+|||+.+.++.++.+++.++..+ .+
T Consensus 300 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (481)
T TIGR00879 300 INAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSK 379 (481)
T ss_pred CeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCccc
Confidence 334445667788889998888889999999999999999999999999999999998887777666652 12
Q ss_pred --cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHH
Q 007702 93 --NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSI 170 (592)
Q Consensus 93 --~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i 170 (592)
+...+....++.++......+....++.|.+|++.|+..+++.+....+|.++++.+ .....+..+|+++|++.++
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~--~~~~~~~~~~~~~f~~~~~ 457 (481)
T TIGR00879 380 SSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFL--FPTMLESIGVGGVFIFFGG 457 (481)
T ss_pred chhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhcCccceehhHHH
Confidence 222333333333322223345666788999999999999999999999998887433 3344455689999988888
Q ss_pred HHHHHHHHHHhhccCCh
Q 007702 171 PALLYFAFAVFFLPESP 187 (592)
Q Consensus 171 ~~~~~~~l~~~~~pEsP 187 (592)
++++.+++.+++.||++
T Consensus 458 ~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 458 LNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHHHHheecccCC
Confidence 88877777777788873
No 108
>PRK12382 putative transporter; Provisional
Probab=99.20 E-value=8.8e-10 Score=117.62 Aligned_cols=156 Identities=15% Similarity=0.119 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHH
Q 007702 24 TIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLL 103 (592)
Q Consensus 24 ~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l 103 (592)
.+....+.+.++.+.+ ..++..+.+.++.+++.++.|++.||+|||+.+..+.++.+++.++..+.++.+.+++..++
T Consensus 234 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (392)
T PRK12382 234 VIGTFVSLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAAL 311 (392)
T ss_pred HHHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 3334444444556654 34566677788888999999999999999999999999988888888888888888889999
Q ss_pred HHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhc
Q 007702 104 DGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFL 183 (592)
Q Consensus 104 ~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~ 183 (592)
.|++.+...+.....+.|.+|+++||+..++.+....+|..+++ .......+..+|+..|.+.+++.++..++.+++.
T Consensus 312 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~--~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 312 TGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSG--PLAGMLATSFGYPSVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred HHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhhc
Confidence 99999988888888999999999999999999999999988884 3444555667899999988887777665554443
No 109
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.17 E-value=1.4e-09 Score=116.41 Aligned_cols=139 Identities=19% Similarity=0.220 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhh
Q 007702 43 EGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISET 122 (592)
Q Consensus 43 ~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~ 122 (592)
.+.+.++..++..++.++.|+++||+|||+.+..+.++..++.+...+.++.+.+++.+++.|++.+...+....++.+.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYN 339 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence 45666777888889999999999999999999999888888887777788888888999999999999999999999999
Q ss_pred cCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhc
Q 007702 123 APSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFL 183 (592)
Q Consensus 123 ~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~ 183 (592)
.|++.||+..++.+....+|..+++ .......+..+|+.+|++.+++.++..++.++..
T Consensus 340 ~~~~~~g~~~~~~~~~~~~g~~~gp--~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 340 SSNQIAGRIFSYNQSFRDIGNVTGP--LMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred CCcccceeeehHHHHHHHHHHHhhH--HHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998899998884 4445556677899999988888777665554443
No 110
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.17 E-value=2.1e-09 Score=113.41 Aligned_cols=151 Identities=17% Similarity=0.244 Sum_probs=120.1
Q ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhh
Q 007702 30 VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVG 109 (592)
Q Consensus 30 ~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g 109 (592)
.++.+++|.+..+.+++.+...+...++.++.|++.||+|||+++.++.++..+..+...+.++.+.+++.+++.|++.|
T Consensus 224 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 303 (375)
T TIGR00899 224 LLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIG 303 (375)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667899999888988888777778888999999999999999988877766666666667788888888999999999
Q ss_pred hhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhcc
Q 007702 110 LAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLP 184 (592)
Q Consensus 110 ~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~p 184 (592)
...+....++.|..|.+ |+..+++.+....+|..+++. ......+..+|+..|++.+++.++..++ .++++
T Consensus 304 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~--~~g~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~ 374 (375)
T TIGR00899 304 ILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGS--VGGILAERWSYHAVYWFAIVMLIVALFC-LLLIK 374 (375)
T ss_pred HHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHH--HHHHHHHhccchhHHHHHHHHHHHHHHH-Hheec
Confidence 88888889999999864 669999998888888888843 3344445668999998888777664443 44444
No 111
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.17 E-value=1.9e-09 Score=116.40 Aligned_cols=170 Identities=19% Similarity=0.156 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHH--
Q 007702 13 IGNFLQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML-- 89 (592)
Q Consensus 13 l~~~~~g~~~~~~~~~~~-~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~-- 89 (592)
+.++..........+.++ ++++++|++..+.|++.+++.++..+++++.|+++||+|||++++++..+..++.....
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 96 (420)
T PRK09528 17 LFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIY 96 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444455444 56677999999999999999999999999999999999999999887666554433221
Q ss_pred -hhc-----cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhH
Q 007702 90 -WSP-----NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRL 163 (592)
Q Consensus 90 -~s~-----~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~ 163 (592)
.++ .+...++++++.|.+.....+....+..+. .+.+|...+..+....+|..+++.+. ..+. ..+|++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~~~~--g~l~-~~~~~~ 171 (420)
T PRK09528 97 VFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCAFIA--GILF-NINPQI 171 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHHHHH--HHHH-hcCchH
Confidence 111 111122233333333333333333333222 24567777777777788888775443 2222 248999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCh
Q 007702 164 MLGVLSIPALLYFAFAVFFLPESP 187 (592)
Q Consensus 164 ~f~i~~i~~~~~~~l~~~~~pEsP 187 (592)
+|++.+++.++.+++.++..||.|
T Consensus 172 ~f~~~~~~~~~~~~~~~~~~~~~~ 195 (420)
T PRK09528 172 NFWLGSGSALILLVLLFFAKPDAP 195 (420)
T ss_pred hHHHHHHHHHHHHHHHhccccccc
Confidence 998888777765555545555543
No 112
>PRK09952 shikimate transporter; Provisional
Probab=99.16 E-value=4e-09 Score=114.59 Aligned_cols=157 Identities=12% Similarity=0.119 Sum_probs=108.9
Q ss_pred HHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHh---h-ccHHHHHHHHHHH
Q 007702 29 IVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW---S-PNVYVLCIARLLD 104 (592)
Q Consensus 29 ~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~---s-~~~~~ll~~R~l~ 104 (592)
.+++++++|.+......+.....+..+++.++.|+++||+|||++++++.++.+++.+.... . ++.+.+++..++.
T Consensus 274 ~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 353 (438)
T PRK09952 274 LNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLA 353 (438)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 34567788888765555555666677888899999999999999999887766555433322 2 2344445566777
Q ss_pred HhhhhhhhhHHHHHHHhhcCccccchhhHHHH-HHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhc
Q 007702 105 GFGVGLAVTLVPLYISETAPSEIRGRLNTLPQ-FTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFL 183 (592)
Q Consensus 105 G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~-~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~ 183 (592)
+++.+...+..+++++|.+|++.|+...++.. ++..+|..+++.+..........+|+.++.+..++.++.++. .+.+
T Consensus 354 ~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~-~~~~ 432 (438)
T PRK09952 354 NIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMT-ALLM 432 (438)
T ss_pred HHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHH-HHHc
Confidence 88888888888999999999999998888754 344467666644433322222346888887777777665444 4556
Q ss_pred cCC
Q 007702 184 PES 186 (592)
Q Consensus 184 pEs 186 (592)
+|+
T Consensus 433 ~~~ 435 (438)
T PRK09952 433 KDN 435 (438)
T ss_pred ccc
Confidence 765
No 113
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.16 E-value=1.2e-09 Score=117.59 Aligned_cols=158 Identities=17% Similarity=0.119 Sum_probs=131.3
Q ss_pred HHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 007702 27 GAIVYIKKD-LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDG 105 (592)
Q Consensus 27 ~~~~~i~~~-~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G 105 (592)
...|.+.++ +|.+....+++.+...++.+++.++.+++.||.++++.+..+.++.+++.++..+.++++.++++.++.|
T Consensus 244 ~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 323 (417)
T PRK10489 244 VLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFG 323 (417)
T ss_pred HhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHH
Confidence 344544444 8999999999999999999999999999999988888888888888888888888888888888899999
Q ss_pred hhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhccC
Q 007702 106 FGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPE 185 (592)
Q Consensus 106 ~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pE 185 (592)
++.+...+....++.|.+|++.||+.+++......+|..+++ ...+.+.+..+++..+.+.+++.++..++....+|+
T Consensus 324 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~--~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (417)
T PRK10489 324 YLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGA--ALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGE 401 (417)
T ss_pred HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHH--HHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhccc
Confidence 998888788888999999999999999999988888988884 444455566788888887777777666666777787
Q ss_pred C
Q 007702 186 S 186 (592)
Q Consensus 186 s 186 (592)
.
T Consensus 402 ~ 402 (417)
T PRK10489 402 L 402 (417)
T ss_pred c
Confidence 6
No 114
>PRK03545 putative arabinose transporter; Provisional
Probab=99.14 E-value=4.8e-09 Score=111.94 Aligned_cols=155 Identities=11% Similarity=0.042 Sum_probs=120.3
Q ss_pred HHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHH-HHHHhhccHHHHHHHHHHHH
Q 007702 27 GAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG-LVMLWSPNVYVLCIARLLDG 105 (592)
Q Consensus 27 ~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~-~~~~~s~~~~~ll~~R~l~G 105 (592)
...+++.+++|.+....+++.+...++.+++.++.|+++||+|||+.++ +..+..++. ++..+.++.+.+.+..++.|
T Consensus 227 ~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g 305 (390)
T PRK03545 227 YIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWG 305 (390)
T ss_pred HHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 3445667778999999999999999999999999999999999887544 444444433 33455677888888888999
Q ss_pred hhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhccC
Q 007702 106 FGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPE 185 (592)
Q Consensus 106 ~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pE 185 (592)
++.+...+....++.+..| +.|++++++......+|..++ +.......+..+++..|++.+++.++.+++.++....
T Consensus 306 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G--~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
T PRK03545 306 IAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAG--ALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFRR 382 (390)
T ss_pred HHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHH--HHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHccc
Confidence 9887777777788888877 588999999888888888888 4445666678899999998888887766665555543
No 115
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.13 E-value=2e-09 Score=117.55 Aligned_cols=151 Identities=9% Similarity=0.023 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhc--CchHHHHHH--HHHHHHHHHHHHhhccHHHHHH
Q 007702 24 TIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL--GRRPMLILS--SVLYFVSGLVMLWSPNVYVLCI 99 (592)
Q Consensus 24 ~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~--GRK~~li~~--~~l~~i~~~~~~~s~~~~~ll~ 99 (592)
.....++.+.++++.+..+.+++.++..++.+++.++.|.++||. ++|+..+++ .++.+++.++..++++++.+++
T Consensus 259 ~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i 338 (455)
T TIGR00892 259 APIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVI 338 (455)
T ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH
Confidence 333444555567899999999999999999999999999999973 344434333 3334455555667788888999
Q ss_pred HHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCC-chhHHHHHHHHHHHHHH
Q 007702 100 ARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASP-SWRLMLGVLSIPALLYF 176 (592)
Q Consensus 100 ~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~-~Wr~~f~i~~i~~~~~~ 176 (592)
.+++.|++.+...+....++.|.+|++++|+..++.+....+|..+++ ...+...+.. +|+..|++.+++.++..
T Consensus 339 ~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp--~i~G~l~~~~g~~~~~f~~~~~~~li~~ 414 (455)
T TIGR00892 339 YCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGP--PLAGRLVDATKNYKYIFYASGSIVVSAG 414 (455)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccc--cceeeeehhcCCcchHHHHhhHHHHHHH
Confidence 999999999999999999999999999999999999999999999984 4444444444 69999988877665533
No 116
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.11 E-value=1.9e-09 Score=119.18 Aligned_cols=158 Identities=14% Similarity=0.128 Sum_probs=100.7
Q ss_pred HHHHHHHHcCCCchHHH------------HHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhc---
Q 007702 28 AIVYIKKDLNLGTTVEG------------LVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP--- 92 (592)
Q Consensus 28 ~~~~i~~~~~~s~~~~g------------li~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~--- 92 (592)
..|.+.++.|.+....+ ....+..++.+++.+++++++||+|||+.++++.++.+++.++.++..
T Consensus 310 ~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~ 389 (502)
T TIGR00887 310 NQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHL 389 (502)
T ss_pred ccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 35666677777543211 123344556777889999999999999999988888777665555431
Q ss_pred -cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcC--------CCchhH
Q 007702 93 -NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA--------SPSWRL 163 (592)
Q Consensus 93 -~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~--------~~~Wr~ 163 (592)
+...+.+.-+...++.....+..+.+.+|.+|++.|++..++.+....+|.++++.........+ ..++..
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 469 (502)
T TIGR00887 390 STHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGH 469 (502)
T ss_pred chhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchH
Confidence 11111111111222222234566788899999999999999999999999888754332221111 134556
Q ss_pred HHHHHHHHHHHHHHHHHhhccCC
Q 007702 164 MLGVLSIPALLYFAFAVFFLPES 186 (592)
Q Consensus 164 ~f~i~~i~~~~~~~l~~~~~pEs 186 (592)
.|++.+++.++..+ ..+++||+
T Consensus 470 ~~~i~~~~~~~~~i-~~~~lpEt 491 (502)
T TIGR00887 470 VLEIFALFMFLGIL-FTLLIPET 491 (502)
T ss_pred HHHHHHHHHHHHHH-HheEeccC
Confidence 77777777666544 45788998
No 117
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.10 E-value=4.3e-10 Score=123.52 Aligned_cols=179 Identities=13% Similarity=0.128 Sum_probs=144.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHH
Q 007702 7 VAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGL 86 (592)
Q Consensus 7 ~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~ 86 (592)
+++...+..+...--...++.+.+.+.++|+.+..+.+|+.++......+.+++.+.+.||+|.|++.+++.++..++.+
T Consensus 47 V~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~ 126 (509)
T KOG2504|consen 47 VVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLL 126 (509)
T ss_pred eeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHH
Confidence 33444444433333344455677889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccHHHHHHH-HHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHH
Q 007702 87 VMLWSPNVYVLCIA-RLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLML 165 (592)
Q Consensus 87 ~~~~s~~~~~ll~~-R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f 165 (592)
+..|+++++++++. -++.|+|.|+.+....+.+..+| .++|+.++++...+..+|.++- +...-.+.+..|||+.+
T Consensus 127 lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~--~~l~~~l~~~~G~r~~~ 203 (509)
T KOG2504|consen 127 LSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVF--PPLLKYLLSKYGWRGAL 203 (509)
T ss_pred HHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeH--HHHHHHHHHHhCcHHHH
Confidence 99999999887765 68899999999988888888665 5679999999988888888765 33344556778999999
Q ss_pred HHHHHHHHHHHHHHHhhccCChh
Q 007702 166 GVLSIPALLYFAFAVFFLPESPR 188 (592)
Q Consensus 166 ~i~~i~~~~~~~l~~~~~pEsP~ 188 (592)
++.+.+.+-.++......|.+|.
T Consensus 204 l~~~~~~l~~~~~~~~~rp~~~~ 226 (509)
T KOG2504|consen 204 LIFGGISLNVLVAGALLRPLSPP 226 (509)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcC
Confidence 99888887766666666665544
No 118
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.10 E-value=5.4e-09 Score=112.91 Aligned_cols=168 Identities=15% Similarity=0.035 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCc-hHHHHHHHHHHHHHHHHH
Q 007702 11 ATIGNFLQGWDNATI-AGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGR-RPMLILSSVLYFVSGLVM 88 (592)
Q Consensus 11 ~~l~~~~~g~~~~~~-~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GR-K~~li~~~~l~~i~~~~~ 88 (592)
+++..|.+....++. .+..+++.+++|++..+.|++.+++.++..+++++.|.++||+|| |+++.++.++..++..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~ 86 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFA 86 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 344555555555555 445567888899999999999999999999999999999999965 778888888888888888
Q ss_pred HhhccHHHHHHHHHHHHhhhhhhhhHHHHH----HH----hhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCc
Q 007702 89 LWSPNVYVLCIARLLDGFGVGLAVTLVPLY----IS----ETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS 160 (592)
Q Consensus 89 ~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~----i~----E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~ 160 (592)
.+.++++.+++.|++.|++.+...+..... .. |+.....|.+..+. +|..+++... ........
T Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G~------lG~~ig~~l~--g~l~~~~~ 158 (418)
T TIGR00889 87 AQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMGT------IGFIAAMWAV--SLLDIELS 158 (418)
T ss_pred HHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeehh------HHHHHHHHHH--HHhcccch
Confidence 888999999999999999776555544332 22 33333344444442 4455553322 22222334
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccCChh
Q 007702 161 WRLMLGVLSIPALLYFAFAVFFLPESPR 188 (592)
Q Consensus 161 Wr~~f~i~~i~~~~~~~l~~~~~pEsP~ 188 (592)
|+ +|++.++..++.++ ..+++||+|+
T Consensus 159 ~~-~f~~~~~~~~~~~~-~~~~~~e~~~ 184 (418)
T TIGR00889 159 NI-QLYITAGSSALLGV-FALTLPDIPV 184 (418)
T ss_pred hH-HHHHHHHHHHHHHH-HHhcCCCCCC
Confidence 54 45555555555443 4567898863
No 119
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.09 E-value=9e-09 Score=109.66 Aligned_cols=151 Identities=13% Similarity=0.128 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Q 007702 22 NATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIAR 101 (592)
Q Consensus 22 ~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R 101 (592)
...+....|.+.+++|.+....+++.+...++.+++.++++.+.||+|+|+.++++.++..+..+..+++++.+.+++.+
T Consensus 221 ~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q 300 (382)
T TIGR00902 221 HAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQ 300 (382)
T ss_pred HHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHH
Confidence 33333444544467999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHH-HHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHH
Q 007702 102 LLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQ-FTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYF 176 (592)
Q Consensus 102 ~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~-~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~ 176 (592)
++.|++.|...+....|+.+. |++.|++..++++ ....+|..++ ...++.+.+..++ ..|.+.++++++.+
T Consensus 301 ~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g--~~~~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T TIGR00902 301 ILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIF--TAFAGFIYPTLGA-GTFVFMAIIAAAAF 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 999999999999999999998 9999999999876 4566777777 4445555566676 55666666665543
No 120
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.08 E-value=4.5e-09 Score=111.04 Aligned_cols=155 Identities=23% Similarity=0.205 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHH--HHHHh-
Q 007702 15 NFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG--LVMLW- 90 (592)
Q Consensus 15 ~~~~g~~~~~~~~~~~~-i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~--~~~~~- 90 (592)
.+.............|. ++++++.+..+.+.+.+...++..++.++.|+++||+|||+.++...++..+.. +...+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 307 (394)
T TIGR00883 228 VIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALL 307 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33333434444444444 457789998899999999999999999999999999999998886655544333 22222
Q ss_pred -hccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHH-HHHHHhhHHHHHHHHHHHhHhcCCCc-hhHHHHH
Q 007702 91 -SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTL-PQFTGSGGMFLAYCMVFGMSLLASPS-WRLMLGV 167 (592)
Q Consensus 91 -s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~-~~~~~~~G~~l~~~~~~~~~~~~~~~-Wr~~f~i 167 (592)
.++.+.+++..++.|++.+...+....++.|.+|++.|++..++ .++...+|..+++. ....+.+..+ |+..++.
T Consensus 308 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~--~~g~l~~~~g~~~~~~~~ 385 (394)
T TIGR00883 308 DSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPY--IAAALVAMTGDWYAIGYY 385 (394)
T ss_pred cCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHH--HHHHHHHHcCcchhHHHH
Confidence 24667777788899999988989999999999999999999887 45556677777743 3344444445 8877655
Q ss_pred HHHH
Q 007702 168 LSIP 171 (592)
Q Consensus 168 ~~i~ 171 (592)
..+.
T Consensus 386 ~~~~ 389 (394)
T TIGR00883 386 LAAL 389 (394)
T ss_pred HHHH
Confidence 5443
No 121
>PRK03699 putative transporter; Provisional
Probab=99.08 E-value=8.6e-09 Score=110.27 Aligned_cols=162 Identities=15% Similarity=0.071 Sum_probs=124.4
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhc
Q 007702 14 GNFLQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP 92 (592)
Q Consensus 14 ~~~~~g~~~~~~~~~~~-~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~ 92 (592)
+.++..+....+....| ++++++|++..+.+++.+.+.++..++.++.|+++||+|||+.+....++..+..++....+
T Consensus 213 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~ 292 (394)
T PRK03699 213 AALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTD 292 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcC
Confidence 33333333334444444 45577899999999999999999999999999999999999999988887777777777777
Q ss_pred cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHH
Q 007702 93 NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPA 172 (592)
Q Consensus 93 ~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~ 172 (592)
+.+.+.+..++.|++.+..++....+..|..|. .++...+.......+|..+++ .......+..+|+..+++.+++.
T Consensus 293 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p--~~~G~l~~~~g~~~~~~~~~~~~ 369 (394)
T PRK03699 293 DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTF--VVTSPIVAHFGLQAALLTANGLY 369 (394)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHH--HHHHHHHHHhCchhhhhhhHHHH
Confidence 877777788889998888888888888888764 467777887778888888884 33444555678999998887777
Q ss_pred HHHHHH
Q 007702 173 LLYFAF 178 (592)
Q Consensus 173 ~~~~~l 178 (592)
++.+++
T Consensus 370 ~~~~~~ 375 (394)
T PRK03699 370 AVVFVM 375 (394)
T ss_pred HHHHHH
Confidence 665443
No 122
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.07 E-value=2.1e-08 Score=107.00 Aligned_cols=177 Identities=11% Similarity=-0.040 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHH--HHHHHHHHHHHHhhH-HhhhhhcCchHHHHHHHHHH-HH
Q 007702 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLV--VAMSLIGATAITTCS-GPISDWLGRRPMLILSSVLY-FV 83 (592)
Q Consensus 8 ~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli--~s~~~lg~~ig~~~~-G~l~Dr~GRK~~li~~~~l~-~i 83 (592)
.+.++..++.+|...+...+.+|.+.++.|.+.++.|++ .+...+...+.+++. ++..||+||||..++.+.+. .+
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 455667789999999999999999999999999999997 466677777777777 55799999999976665432 22
Q ss_pred HHHHHH-h--hcc-HHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCC
Q 007702 84 SGLVML-W--SPN-VYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASP 159 (592)
Q Consensus 84 ~~~~~~-~--s~~-~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~ 159 (592)
...... + ..+ ...++..-++.++..+...+..-.+..|..+++.++...+....+..+|.+++... ...+.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~--~~~l~~~~ 160 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAG--TLVLFGKF 160 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHH--HHHHHHHh
Confidence 222222 2 222 33344444555566666667777788888888888888888887778888887432 33444567
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhccCC
Q 007702 160 SWRLMLGVLSIPALLYFAFAVFFLPES 186 (592)
Q Consensus 160 ~Wr~~f~i~~i~~~~~~~l~~~~~pEs 186 (592)
+||.+|++.++..++..+..++..|+.
T Consensus 161 gw~~~f~~~a~l~~~~~~~~~~~~~~~ 187 (390)
T TIGR02718 161 GQRPAFLLVACVPLASLVCVLWLKDRA 187 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999888776555554454544
No 123
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.07 E-value=8.4e-09 Score=110.41 Aligned_cols=161 Identities=19% Similarity=0.220 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhc-cHHHHHHHHH
Q 007702 24 TIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP-NVYVLCIARL 102 (592)
Q Consensus 24 ~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~-~~~~ll~~R~ 102 (592)
.+....|.+..++|.+....+...+.+.++.+++.++.|++.||+|||+.++++..+..++.++..+.+ +...+. -+
T Consensus 223 ~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~ 300 (393)
T PRK09705 223 SLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW--AM 300 (393)
T ss_pred HHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH--HH
Confidence 344445555556899999999999999999999999999999999999999998888777766555433 322222 34
Q ss_pred HHHhhhhhhhhHHHHHHHhhcC-ccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCC-chhHHHHHHHHHHHHHHHHHH
Q 007702 103 LDGFGVGLAVTLVPLYISETAP-SEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASP-SWRLMLGVLSIPALLYFAFAV 180 (592)
Q Consensus 103 l~G~~~g~~~~~~~~~i~E~~p-~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~-~Wr~~f~i~~i~~~~~~~l~~ 180 (592)
+.|++.+...+.......+.++ ++.||+..++.+....++..+++.. ...+.+.. +|...|.+..+..++..+...
T Consensus 301 l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~--~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (393)
T PRK09705 301 VCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWF--SGVLRSISGNYLMDWAFHALCVVGLMIITL 378 (393)
T ss_pred HHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Confidence 6688888887877777777775 6789999999888888888777433 33333333 588888887777777666667
Q ss_pred hhccCChh
Q 007702 181 FFLPESPR 188 (592)
Q Consensus 181 ~~~pEsP~ 188 (592)
.+.||++.
T Consensus 379 ~~~~~~~~ 386 (393)
T PRK09705 379 RFAPARFP 386 (393)
T ss_pred Hhcccccc
Confidence 78888743
No 124
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.06 E-value=1.6e-08 Score=108.52 Aligned_cols=161 Identities=13% Similarity=0.076 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHH-HHHHHHHHHHHHHHh-----
Q 007702 17 LQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLI-LSSVLYFVSGLVMLW----- 90 (592)
Q Consensus 17 ~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li-~~~~l~~i~~~~~~~----- 90 (592)
.............|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+...++.+...+
T Consensus 233 ~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~ 312 (402)
T TIGR00897 233 INTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHF 312 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 33333444445567777789999988899999999999999999999999999998764 333334443333322
Q ss_pred hccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHH
Q 007702 91 SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSI 170 (592)
Q Consensus 91 s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i 170 (592)
.++++.+++..++.|++.+...+. ...+.|..| ++||+..++.+....+|..+++. ......+..+|+.++++.++
T Consensus 313 ~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~--i~g~l~~~~g~~~~~~~~a~ 388 (402)
T TIGR00897 313 GHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPA--IAVLFIGFFGAIGVVWIFAA 388 (402)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHH--HHHHHHhhcchHHHHHHHHH
Confidence 346677778888899888776554 455677655 58999999999999999988843 34455566789999998888
Q ss_pred HHHHHHHHHHh
Q 007702 171 PALLYFAFAVF 181 (592)
Q Consensus 171 ~~~~~~~l~~~ 181 (592)
+.++..++..|
T Consensus 389 ~~~i~~~~~~~ 399 (402)
T TIGR00897 389 LYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHH
Confidence 77665554433
No 125
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.06 E-value=1.3e-08 Score=108.44 Aligned_cols=149 Identities=14% Similarity=0.152 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Q 007702 23 ATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARL 102 (592)
Q Consensus 23 ~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~ 102 (592)
......+|.+.++.+.+....+++.+...++.+++.++.|+++||+|||+++..+.++..++.+... + ...+....+
T Consensus 217 ~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~ 293 (381)
T PRK03633 217 GSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALF 293 (381)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHH
Confidence 3333455666667899888899999999999999999999999999999999988888777665443 2 223345677
Q ss_pred HHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHH
Q 007702 103 LDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYF 176 (592)
Q Consensus 103 l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~ 176 (592)
+.|++.+...|....++.|..|+++++...+..+....+|..++ +...+...++.+|++.|.+.+++.++..
T Consensus 294 l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~ig--p~~~G~l~~~~g~~~~f~~~~~~~l~~~ 365 (381)
T PRK03633 294 ILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLG--PSFTAMLMQNYSDNLLFIMIASVSFIYL 365 (381)
T ss_pred HHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhCccHHHHHHHHHHHHHH
Confidence 77887777788888999999999888877777777888898888 4444555666789999988777776544
No 126
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.05 E-value=1e-08 Score=107.95 Aligned_cols=165 Identities=20% Similarity=0.174 Sum_probs=112.4
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHH--HHH------HHHHHH
Q 007702 12 TIGNFLQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPM--LIL------SSVLYF 82 (592)
Q Consensus 12 ~l~~~~~g~~~~~~~~~~~-~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~--li~------~~~l~~ 82 (592)
.+..+........+....| ++.++++.+..+.+++.+...++..++.++.|+++||+|||+. ... +.++..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (399)
T TIGR00893 221 ALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLS 300 (399)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHH
Confidence 3344444444444555455 4566789988899999999999999999999999999999961 111 111111
Q ss_pred HHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCc-h
Q 007702 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS-W 161 (592)
Q Consensus 83 i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~-W 161 (592)
+..+.....++.+..+...++.+++.+ ..+....+++|.+|++.||+..++.+....+|..++ +.......+..+ |
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~--~~i~g~l~~~~g~~ 377 (399)
T TIGR00893 301 LLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVG--PIVIGAIAATTGSF 377 (399)
T ss_pred HHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhh--hHHhhhhccCCCch
Confidence 111111122344444444445555554 678889999999999999999999999999999888 444455556666 9
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 007702 162 RLMLGVLSIPALLYFAFA 179 (592)
Q Consensus 162 r~~f~i~~i~~~~~~~l~ 179 (592)
+..|.+.+++.++..++.
T Consensus 378 ~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 378 AGALMVVAALALIGALSY 395 (399)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 999988777766655443
No 127
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.05 E-value=5.3e-09 Score=111.24 Aligned_cols=138 Identities=25% Similarity=0.258 Sum_probs=109.1
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHH-HHHhhccHHHHHHHHHHHHh
Q 007702 28 AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGL-VMLWSPNVYVLCIARLLDGF 106 (592)
Q Consensus 28 ~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~-~~~~s~~~~~ll~~R~l~G~ 106 (592)
..+++.++++.+..+.+++.+...++.+++.++.|+++||+|||+.+.++.++..+..+ .....++.+.+.+..++.|+
T Consensus 261 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (405)
T TIGR00891 261 LPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQM 340 (405)
T ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 34456778899999999999999999999999999999999999999888776644333 33345666777777788888
Q ss_pred hhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCc-hhHHHHH
Q 007702 107 GVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS-WRLMLGV 167 (592)
Q Consensus 107 ~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~-Wr~~f~i 167 (592)
+.+...+..+.++.|.+|++.||+..++.+....+|..+++.+ ...+.+..+ |+..+..
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~--~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 341 LVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPII--GALLAQRLDEYGTALAS 400 (405)
T ss_pred HHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHH--HHHHHHhccccchhHHh
Confidence 7777778888999999999999999999998888998888433 444455555 7666543
No 128
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.04 E-value=7.8e-09 Score=113.83 Aligned_cols=143 Identities=22% Similarity=0.202 Sum_probs=108.4
Q ss_pred HHHH-HHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhh--ccHHHHHHHHHHH
Q 007702 28 AIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS--PNVYVLCIARLLD 104 (592)
Q Consensus 28 ~~~~-i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s--~~~~~ll~~R~l~ 104 (592)
.+|. +++++|.+..+.+++.+.+.++.+++.++.|+++||+|||++++++.++..+..++.... .+.+.+.+..++.
T Consensus 297 ~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (496)
T PRK03893 297 LLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQ 376 (496)
T ss_pred HHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHH
Confidence 4444 446899999999999999999999999999999999999999998877766665544333 3344444555555
Q ss_pred HhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHH
Q 007702 105 GFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPA 172 (592)
Q Consensus 105 G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~ 172 (592)
++......+..+.++.|.+|++.||+.+++.+....+|..+++ .......+..+|+..+.+.++..
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp--~l~g~l~~~~g~~~~~~~~~~~~ 442 (496)
T PRK03893 377 QMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAP--ILGALIAQRLDLGTALASLSFSL 442 (496)
T ss_pred HHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHH--HHHHHHhccCChHHHHHHHHHHH
Confidence 4444344567788999999999999999999888889988884 44556667778988876555443
No 129
>PRK15075 citrate-proton symporter; Provisional
Probab=99.03 E-value=2.8e-08 Score=107.75 Aligned_cols=123 Identities=21% Similarity=0.155 Sum_probs=87.3
Q ss_pred HHHHHHHH-HHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHH-H---HhhccHHHHH
Q 007702 24 TIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLV-M---LWSPNVYVLC 98 (592)
Q Consensus 24 ~~~~~~~~-i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~-~---~~s~~~~~ll 98 (592)
.+....|. +++.+|++..+.++....+.++..++.++.|+++||+|||++++++.++..+..+. . ...+++..+.
T Consensus 256 ~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (434)
T PRK15075 256 LITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARML 335 (434)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHH
Confidence 34444454 55568999888888888899999999999999999999999988765554332221 1 1234454455
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHH-HHhhHHHHH
Q 007702 99 IARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQF-TGSGGMFLA 146 (592)
Q Consensus 99 ~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~-~~~~G~~l~ 146 (592)
+..++.|++.+...+....++.|.+|++.|+...++.+. +..++..++
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~ 384 (434)
T PRK15075 336 AVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFT 384 (434)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhH
Confidence 556667777777777777899999999999999988543 333334444
No 130
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.99 E-value=3.5e-08 Score=107.71 Aligned_cols=159 Identities=18% Similarity=0.100 Sum_probs=102.5
Q ss_pred HHHHHHH-HHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhc--CchHHH-HHHHHHHHHHHHHHHh--hccHHHHH
Q 007702 25 IAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL--GRRPML-ILSSVLYFVSGLVMLW--SPNVYVLC 98 (592)
Q Consensus 25 ~~~~~~~-i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~--GRK~~l-i~~~~l~~i~~~~~~~--s~~~~~ll 98 (592)
....+|. +++++|++....+++.+.+.++.+++.++.|+++||+ |||+.. +....+..++.+...+ ..+.+.+.
T Consensus 272 ~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 351 (452)
T PRK11273 272 ILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDM 351 (452)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHH
Confidence 3334444 5566889888889988999999999999999999999 556533 2222333333332222 33454455
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHH-HHHHHHHhHhcCCCchhHHHHHHHHHHHHHHH
Q 007702 99 IARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFL-AYCMVFGMSLLASPSWRLMLGVLSIPALLYFA 177 (592)
Q Consensus 99 ~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l-~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~ 177 (592)
+..++.|.+..........++.|.+|++.||+..++.+....+|..+ + +.......+..+|+..|++.++.+++.++
T Consensus 352 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g--~~v~g~l~~~~g~~~~f~~~~~~~~~~~~ 429 (452)
T PRK11273 352 ACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAA--SAIVGYTVDFFGWDGGFMVMIGGSILAVI 429 (452)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhh--hhhHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 55555565443333344567789999999999999998777666543 4 23334444566899999877776666544
Q ss_pred HHH-hhccC
Q 007702 178 FAV-FFLPE 185 (592)
Q Consensus 178 l~~-~~~pE 185 (592)
+.. +..+|
T Consensus 430 ~~~~~~~~~ 438 (452)
T PRK11273 430 LLIVVMIGE 438 (452)
T ss_pred HHHHHhccc
Confidence 443 33344
No 131
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.98 E-value=1.5e-08 Score=110.95 Aligned_cols=176 Identities=19% Similarity=0.134 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcC-----chHHHHHHHHHH
Q 007702 7 VAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLG-----RRPMLILSSVLY 81 (592)
Q Consensus 7 ~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~G-----RK~~li~~~~l~ 81 (592)
...++...++.+|..........+.+++++|++.++.+.+.+...+...+-.+ +|+++|+++ ||+.++++.++.
T Consensus 27 ~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~ 105 (468)
T TIGR00788 27 VLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLG 105 (468)
T ss_pred HHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHH
Confidence 34455556788888844444566678888999999999999999999998555 999999998 888888887776
Q ss_pred H-HHHHHHHhhccHHHHH-HHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHH---HHhhHHHHHHHHHHHhHhc
Q 007702 82 F-VSGLVMLWSPNVYVLC-IARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQF---TGSGGMFLAYCMVFGMSLL 156 (592)
Q Consensus 82 ~-i~~~~~~~s~~~~~ll-~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~---~~~~G~~l~~~~~~~~~~~ 156 (592)
. +.....+..++...+. +..++.+++.+....++-.+..|..+ +.+....+.... ...+|..++.. .++.+.
T Consensus 106 ~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~--l~G~l~ 182 (468)
T TIGR00788 106 SAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSL--LGGPLL 182 (468)
T ss_pred HHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHH--HHHHHH
Confidence 3 4433344445544444 47899999999999999999999999 555444333322 23367777633 334445
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHhhccCCh
Q 007702 157 ASPSWRLMLGVLSIPALLYFAFAVFFLPESP 187 (592)
Q Consensus 157 ~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP 187 (592)
+..+|+..|++.+++.++. ++..+++||.+
T Consensus 183 ~~~~~~~~f~~~a~l~ll~-~~~~~~~~E~~ 212 (468)
T TIGR00788 183 DKTLTRILFLITAALLLLQ-LFVSNLSKERR 212 (468)
T ss_pred HhcCcchHHHHHHHHHHHH-HHHHHhccccc
Confidence 6678999999888887775 44567788863
No 132
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.97 E-value=6.7e-08 Score=104.79 Aligned_cols=153 Identities=16% Similarity=0.128 Sum_probs=93.7
Q ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHH--h--hccHHHHHHHHHHHH
Q 007702 30 VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML--W--SPNVYVLCIARLLDG 105 (592)
Q Consensus 30 ~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~--~--s~~~~~ll~~R~l~G 105 (592)
+++.+++|.+..+.++..++..++..++.++.|+++||+|||+.++++.++.++..+... . .++....+..-++.+
T Consensus 268 ~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (432)
T PRK10406 268 KYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCAL 347 (432)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 446677899888888888888888889999999999999999988877665444332221 1 223332222223333
Q ss_pred hhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhh-HHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhcc
Q 007702 106 FGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSG-GMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLP 184 (592)
Q Consensus 106 ~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~-G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~p 184 (592)
++.+...+..+.+++|.+|++.|+...++.+....+ .....+.. .........|...+++.++..++.++ ..++++
T Consensus 348 ~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~--~~~l~~~g~~~~~~~~~~~~~~i~~~-~~~~l~ 424 (432)
T PRK10406 348 LIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYV--ALSLKSIGMETAFFWYVTLMAVVAFL-VSLMLH 424 (432)
T ss_pred HHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHH--HHHHHHhCCCcHHHHHHHHHHHHHHH-HHHHhh
Confidence 444445556778899999999999999997755443 12223222 22222222355555555555554433 334443
Q ss_pred C
Q 007702 185 E 185 (592)
Q Consensus 185 E 185 (592)
+
T Consensus 425 ~ 425 (432)
T PRK10406 425 R 425 (432)
T ss_pred h
Confidence 3
No 133
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.97 E-value=2.1e-08 Score=121.81 Aligned_cols=158 Identities=21% Similarity=0.225 Sum_probs=125.2
Q ss_pred HHHHHHHHcCCCch-HHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHh
Q 007702 28 AIVYIKKDLNLGTT-VEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGF 106 (592)
Q Consensus 28 ~~~~i~~~~~~s~~-~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~ 106 (592)
..+++...++++.. ..+++.+...++.+++.+++|+++||+++++++.++.++.+++.++..+.++++.++++.++.|+
T Consensus 255 ~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 334 (1146)
T PRK08633 255 FPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGF 334 (1146)
T ss_pred hHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 44556778999988 99999999999999999999999999999999999988888888888888888888899999999
Q ss_pred hhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhccCC
Q 007702 107 GVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (592)
Q Consensus 107 ~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEs 186 (592)
+.+...+...+++.+.+|++.||+.+++.++...+|.+++..+...... ...++...|++.+++.++..++.++.+|++
T Consensus 335 ~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (1146)
T PRK08633 335 SAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG-LGLSPAGLFYLIALVTLIGTLYTLLLLPDS 413 (1146)
T ss_pred HHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 9999988899999999999999999999998888888666444322222 234566666655555444444444445543
No 134
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.96 E-value=5.8e-08 Score=106.11 Aligned_cols=169 Identities=20% Similarity=0.167 Sum_probs=133.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCch--HHHHHHHHHHHHHHHHHHh--
Q 007702 15 NFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRR--PMLILSSVLYFVSGLVMLW-- 90 (592)
Q Consensus 15 ~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK--~~li~~~~l~~i~~~~~~~-- 90 (592)
.+.+|+ ..++.....+.+++++++..+...+.-+..+.+++|++++|++.||+|.| ++++++.+++.+..+.-.+
T Consensus 292 l~~dg~-~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~ 370 (477)
T PF11700_consen 292 LYSDGV-NTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGF 370 (477)
T ss_pred HHHHHH-HHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 333444 33444455667789999999999999999999999999999999999999 8999888888666555555
Q ss_pred ------hccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHH
Q 007702 91 ------SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLM 164 (592)
Q Consensus 91 ------s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~ 164 (592)
.++.+.+.+.-++.|+..|...+..-++.+|+.|+++.+...+++.+..-...++++.+.-...... .+-|+.
T Consensus 371 ~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~t-g~~r~g 449 (477)
T PF11700_consen 371 WPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDAT-GSQRYG 449 (477)
T ss_pred hhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhH
Confidence 5677889999999999999999999999999999999999999999999999999966543333222 247888
Q ss_pred HHHHHHHHHHHHHHHHhhccCC
Q 007702 165 LGVLSIPALLYFAFAVFFLPES 186 (592)
Q Consensus 165 f~i~~i~~~~~~~l~~~~~pEs 186 (592)
+....++.++.++ .+++++..
T Consensus 450 ~~~l~~lf~~gl~-ll~~v~~~ 470 (477)
T PF11700_consen 450 FLFLLVLFLIGLI-LLFFVDVE 470 (477)
T ss_pred HHHHHHHHHHHHH-HHhhccch
Confidence 7766666666443 34666654
No 135
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.96 E-value=5.1e-08 Score=99.64 Aligned_cols=169 Identities=21% Similarity=0.304 Sum_probs=141.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHH
Q 007702 6 LVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG 85 (592)
Q Consensus 6 ~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~ 85 (592)
+.+..+.+..+.---....++|.++.+++++|++.+..|+++++..++..+.+++..+++.|+|-++.+..++++..++.
T Consensus 12 ~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~ 91 (395)
T COG2807 12 LLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGI 91 (395)
T ss_pred HHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 33333444444444557788899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHH
Q 007702 86 LVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLML 165 (592)
Q Consensus 86 ~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f 165 (592)
++-... +.+.++.+-.+.|.+++......|..+-+.+|++ -+.+++++.....+|..++........... .+||..+
T Consensus 92 ~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~-~gW~~aL 168 (395)
T COG2807 92 LIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHS-GGWRGAL 168 (395)
T ss_pred HHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhh-ccHHHHH
Confidence 988887 7788899999999999999999999999999875 578999999999998888855544433222 5899999
Q ss_pred HHHHHHHHHHHH
Q 007702 166 GVLSIPALLYFA 177 (592)
Q Consensus 166 ~i~~i~~~~~~~ 177 (592)
.+-++++++.++
T Consensus 169 ~~WAl~allAl~ 180 (395)
T COG2807 169 GFWALLALLALL 180 (395)
T ss_pred HHHHHHHHHHHH
Confidence 888888877553
No 136
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.94 E-value=4e-08 Score=106.61 Aligned_cols=169 Identities=20% Similarity=0.105 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhc--C-chHHHHHHHHHHHHHHHH--H
Q 007702 15 NFLQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL--G-RRPMLILSSVLYFVSGLV--M 88 (592)
Q Consensus 15 ~~~~g~~~~~~~~~~~-~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~--G-RK~~li~~~~l~~i~~~~--~ 88 (592)
.+........+...+| ++.+++|++..+.++..+.+.++..++.++.|+++||+ + ||+......+...+.... .
T Consensus 252 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~ 331 (434)
T PRK11663 252 YVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWL 331 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHH
Confidence 3333333334444444 45577899999999999999999999999999999998 3 333322222221111111 1
Q ss_pred HhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHH
Q 007702 89 LWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVL 168 (592)
Q Consensus 89 ~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~ 168 (592)
....+...+.+..++.|++..........+++|.+|++.||..+++.+....+|..+++.+ .....+..+|+..|++.
T Consensus 332 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~--~g~l~~~~g~~~~f~~~ 409 (434)
T PRK11663 332 MPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYP--LAKVLEIWHWTGFFVVI 409 (434)
T ss_pred cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhccc--HHHHHHhcccHHHHHHH
Confidence 1123333333444444543332223345677899999999999999999999999988444 34455667899999988
Q ss_pred HHHHHHHHHHHHhhccC
Q 007702 169 SIPALLYFAFAVFFLPE 185 (592)
Q Consensus 169 ~i~~~~~~~l~~~~~pE 185 (592)
+++.++..++.+++.++
T Consensus 410 ~~~~~~~~~~~~~~~~~ 426 (434)
T PRK11663 410 SIAAGISALLLLPFLNA 426 (434)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 88877766555544443
No 137
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.94 E-value=5.5e-08 Score=104.04 Aligned_cols=143 Identities=20% Similarity=0.259 Sum_probs=116.3
Q ss_pred CCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHH
Q 007702 37 NLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVP 116 (592)
Q Consensus 37 ~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~ 116 (592)
+.+....+.+.++..+...++.++.|++.||+|||+.++++.++.++..++..++++.+.+++.+++.|++.+.......
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456678888888889999999999999999999999999999888888878888999889999999999877777777
Q ss_pred HHHHhhcCccccchhhHH-HHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHh
Q 007702 117 LYISETAPSEIRGRLNTL-PQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVF 181 (592)
Q Consensus 117 ~~i~E~~p~~~Rg~~~~~-~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~ 181 (592)
.++.+..|++.++...+. .+....+|..+++ ...+.+.+..||+.+|.+.+++.++..++..+
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~--~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLS--TLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHH--HhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 788899999999887766 5677788888873 34455556668999999888887776655444
No 138
>TIGR00895 2A0115 benzoate transport.
Probab=98.94 E-value=3.6e-08 Score=104.40 Aligned_cols=135 Identities=16% Similarity=0.045 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccH
Q 007702 15 NFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNV 94 (592)
Q Consensus 15 ~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~ 94 (592)
.+.............|++.++++.+..+.+++.+...++.+++.++.|+++||+|||+.++...+..++..++....++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (398)
T TIGR00895 259 YFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSP 338 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCH
Confidence 33434444445556678888999999999999999999999999999999999999955544444433333333335677
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHH
Q 007702 95 YVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCM 149 (592)
Q Consensus 95 ~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~ 149 (592)
+.+++..++.|++.+...+....++.|.+|++.||+..++.+....+|..+++.+
T Consensus 339 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~ 393 (398)
T TIGR00895 339 TLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPIL 393 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7778888999999999999999999999999999999999998888888887443
No 139
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.94 E-value=4.7e-08 Score=108.02 Aligned_cols=160 Identities=20% Similarity=0.215 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHh--
Q 007702 13 IGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW-- 90 (592)
Q Consensus 13 l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~-- 90 (592)
++.+...+...+...+.+.+..+..-++...+++.++..+..++.++++|.++||+.||++++.+.++..+..++.++
T Consensus 17 ~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~ 96 (524)
T PF05977_consen 17 IAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLA 96 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444555555566667889999999999999999999999999999999999999887665544433
Q ss_pred ---hccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHH
Q 007702 91 ---SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGV 167 (592)
Q Consensus 91 ---s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i 167 (592)
..+.+.+++.-++.|++.+...|...+++.|+.|+++...++++.+...++..++|+ ..++.+....|-.+.|.+
T Consensus 97 ~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGP--algG~Lva~~G~~~~f~i 174 (524)
T PF05977_consen 97 FFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGP--ALGGILVAFFGAAAAFLI 174 (524)
T ss_pred HhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccc--hHHHHHHHHHHHHHHHHH
Confidence 247889999999999999999999999999999999999999999988888888874 334444444466677776
Q ss_pred HHHHHHH
Q 007702 168 LSIPALL 174 (592)
Q Consensus 168 ~~i~~~~ 174 (592)
.++..++
T Consensus 175 nalsfl~ 181 (524)
T PF05977_consen 175 NALSFLI 181 (524)
T ss_pred HHHHHHH
Confidence 6655444
No 140
>PRK10504 putative transporter; Provisional
Probab=98.94 E-value=5.6e-08 Score=106.42 Aligned_cols=133 Identities=12% Similarity=0.154 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhh---c
Q 007702 17 LQGWDNATIAGAIVYIKK-DLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS---P 92 (592)
Q Consensus 17 ~~g~~~~~~~~~~~~i~~-~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s---~ 92 (592)
+............|++.+ .+|.+....++......++..++.++.|++.||+|||++++++.++..++.++..+. +
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (471)
T PRK10504 272 AGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLG 351 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccc
Confidence 333334444455666544 589999999999998889999999999999999999999999988888877666553 3
Q ss_pred cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHH
Q 007702 93 NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCM 149 (592)
Q Consensus 93 ~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~ 149 (592)
+.+.+.+.-++.|++.+...+....++.+..|++.||...++.++...+|..+++.+
T Consensus 352 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i 408 (471)
T PRK10504 352 WYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTI 408 (471)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHH
Confidence 444455667788888888888888999999999999999999998888888777444
No 141
>TIGR00898 2A0119 cation transport protein.
Probab=98.93 E-value=1.7e-08 Score=111.43 Aligned_cols=135 Identities=25% Similarity=0.260 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccH--HHHHHHHHHHHhhhhhhhhHHHHHHHhhcC
Q 007702 47 VAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNV--YVLCIARLLDGFGVGLAVTLVPLYISETAP 124 (592)
Q Consensus 47 ~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~--~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p 124 (592)
.....+..+++.++.+++.||+|||++++++.++.+++.++..+.++. +..++.-++.+++.+...+..+++.+|.+|
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 334456677888899999999999999999999988888887776543 455556677778888888889999999999
Q ss_pred ccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhccCC
Q 007702 125 SEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (592)
Q Consensus 125 ~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEs 186 (592)
++.|+..+++.+....+|.++++.+.. ....++..++.+.++..++..+ ..+++||+
T Consensus 441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~lpet 497 (505)
T TIGR00898 441 TVVRNLGVGVCSTMARVGSIISPFLVY----LGEKWLFLPLVLFGGLALLAGI-LTLFLPET 497 (505)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHhHHHH----HHHHHHhhHHHHHHHHHHHHHH-HHHcCcCC
Confidence 999999999999999999998865543 1234566777777777666544 45678998
No 142
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.93 E-value=7.5e-08 Score=103.80 Aligned_cols=136 Identities=15% Similarity=0.059 Sum_probs=96.4
Q ss_pred HHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhc--cHHHHHHHHHH
Q 007702 26 AGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP--NVYVLCIARLL 103 (592)
Q Consensus 26 ~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~--~~~~ll~~R~l 103 (592)
...+|.+.++.|.+....+.+.+...++..++.++.|++.||+|||+.+..+.++..++.+.....+ +...+.+..+.
T Consensus 251 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (426)
T PRK12307 251 FGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFG 330 (426)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHH
Confidence 3345655566788888889999999999999999999999999999999988877766655544333 22222222222
Q ss_pred HHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhH
Q 007702 104 DGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRL 163 (592)
Q Consensus 104 ~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~ 163 (592)
.+++..+..+..+.++.|.+|++.||+.+++.+....+|..+++.. ...+.+..++..
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~--~g~l~~~~g~~~ 388 (426)
T PRK12307 331 LMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMA--ATWLGITMGLGA 388 (426)
T ss_pred HHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHH--HHHHHHcccHHH
Confidence 2222233345667888999999999999999888888888887444 333444555544
No 143
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.93 E-value=4.8e-08 Score=105.64 Aligned_cols=112 Identities=16% Similarity=0.253 Sum_probs=93.1
Q ss_pred CchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHhhhhhhhhHHHH
Q 007702 39 GTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS-PNVYVLCIARLLDGFGVGLAVTLVPL 117 (592)
Q Consensus 39 s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s-~~~~~ll~~R~l~G~~~g~~~~~~~~ 117 (592)
+....+++.++..++.+++.+++++++||+|||+++.++.++.+++.++..+. ++.+.+++..++.|++.+...+..++
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567777888899999999999999999999999999998888887777665 45667777888999999999899999
Q ss_pred HHHhhcC-------ccccchhhHHHHHHHhhHHHHHHHHH
Q 007702 118 YISETAP-------SEIRGRLNTLPQFTGSGGMFLAYCMV 150 (592)
Q Consensus 118 ~i~E~~p-------~~~Rg~~~~~~~~~~~~G~~l~~~~~ 150 (592)
+++|..| ++.+|...++.++...+|..+++.+.
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~ 374 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLV 374 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999876 45679999999988888888775443
No 144
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.92 E-value=4e-09 Score=114.17 Aligned_cols=159 Identities=23% Similarity=0.308 Sum_probs=123.0
Q ss_pred HHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhh----hcCchHHHH-HHHHHHHHHHHHHHhh-c-------c
Q 007702 27 GAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISD----WLGRRPMLI-LSSVLYFVSGLVMLWS-P-------N 93 (592)
Q Consensus 27 ~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~D----r~GRK~~li-~~~~l~~i~~~~~~~s-~-------~ 93 (592)
...+++.+.+++++...|++..+..+..++..|+.|.++| |+|||+..+ ++.++..++.+++... | .
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 4566788889999999999999999999999999999999 899666555 6778888877777766 4 2
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHhhcC-ccccchhhHHHHHHHhhHHHHHHHHHHHhH--hcCC---CchhHHHHH
Q 007702 94 VYVLCIARLLDGFGVGLAVTLVPLYISETAP-SEIRGRLNTLPQFTGSGGMFLAYCMVFGMS--LLAS---PSWRLMLGV 167 (592)
Q Consensus 94 ~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p-~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~--~~~~---~~Wr~~f~i 167 (592)
...+++.-++..++.........++.+|+++ +++|.+..+.-+.+..+|.++......... .... .+|++...+
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 3345566666677777777777889999998 578999999999888888864433322221 1211 279999999
Q ss_pred HHHHHHHHHHHHHhhccC
Q 007702 168 LSIPALLYFAFAVFFLPE 185 (592)
Q Consensus 168 ~~i~~~~~~~l~~~~~pE 185 (592)
.+++.++..++..+..+|
T Consensus 183 ~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHhhhhhheeee
Confidence 999988888888888888
No 145
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.92 E-value=8.3e-08 Score=103.68 Aligned_cols=177 Identities=20% Similarity=0.154 Sum_probs=124.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHH
Q 007702 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (592)
Q Consensus 4 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i 83 (592)
...+.+++.++..+.|.+ .+......+-++-|++..++.+......+...+.++++..+.||+|||+.++++..++.+
T Consensus 270 ~~~i~~~v~~~qq~sGi~--ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~ 347 (485)
T KOG0569|consen 270 PLLIGIVVSFAQQFSGIN--AIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAV 347 (485)
T ss_pred HHHHHHHHHHHHHhcCcc--eeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 334444444444444443 333344567788899999899999999999999999999999999999999999999988
Q ss_pred HHHHHHhhc----cH----H-HHHHHHHHHH--hhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHH
Q 007702 84 SGLVMLWSP----NV----Y-VLCIARLLDG--FGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFG 152 (592)
Q Consensus 84 ~~~~~~~s~----~~----~-~ll~~R~l~G--~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~ 152 (592)
..+++...- .. . ..+++.++-. ++.|. -|+.+-+.+|++|++.|..++++..+...+..++.... .
T Consensus 348 ~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~-gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~--f 424 (485)
T KOG0569|consen 348 ALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGP-GPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFA--F 424 (485)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCC-CchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHH--H
Confidence 877776531 11 1 1123333333 33332 36778889999999999999999888877777655222 2
Q ss_pred hHhcCCCchhHHHHHHHHHHHHHHHHHHhhccCC
Q 007702 153 MSLLASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (592)
Q Consensus 153 ~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEs 186 (592)
....+..|= +.|.+..+++++.+++.++++|||
T Consensus 425 p~l~~~~g~-~~filF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 425 PPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred HHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCccc
Confidence 222222332 667777888888888889999999
No 146
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.92 E-value=4.2e-08 Score=102.52 Aligned_cols=123 Identities=18% Similarity=0.193 Sum_probs=108.5
Q ss_pred HHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhcc-HHHHHHHHHHH
Q 007702 27 GAIVYIKKD-LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPN-VYVLCIARLLD 104 (592)
Q Consensus 27 ~~~~~i~~~-~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~-~~~ll~~R~l~ 104 (592)
...|++.++ ++.+..+.+++.+...++.+++.++.+++.||+|||+.+..+.++.+++.++..+.++ ++.+++..++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAI 311 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHH
Confidence 455665554 8999999999999999999999999999999999999999888888888887777774 88888899999
Q ss_pred HhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHH
Q 007702 105 GFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCM 149 (592)
Q Consensus 105 G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~ 149 (592)
|++.+...+....++.|.+|++.||+..++.+....+|..+++.+
T Consensus 312 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~ 356 (365)
T TIGR00900 312 GVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLIL 356 (365)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998888887433
No 147
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.91 E-value=5.5e-08 Score=101.45 Aligned_cols=181 Identities=20% Similarity=0.233 Sum_probs=144.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHH
Q 007702 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (592)
Q Consensus 3 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~ 82 (592)
+.-+..+..+-..+.+|.+. .+.....+-+.++|++..+..++.....+.+++|+++.|+|.||+|-|+++.++.+++.
T Consensus 251 ~~~i~~FLiA~~~~~DGv~t-il~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~ 329 (438)
T COG2270 251 RKNLVLFLIARFFYIDGVNT-ILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILS 329 (438)
T ss_pred ccchHHHHHHHHHHHhhHHH-HHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHH
Confidence 34455666666667777743 44444555667999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchh
Q 007702 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (592)
Q Consensus 83 i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr 162 (592)
+.++...+...-..+.+.-++.|+..|+..+.+-.|.++..|+++-++..+++.+.....+++++........... +-|
T Consensus 330 ~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg-~~r 408 (438)
T COG2270 330 IAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITG-SSR 408 (438)
T ss_pred HHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhc-chh
Confidence 9998888877777777888999999999999999999999999999999999999999999999766544433333 356
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCC
Q 007702 163 LMLGVLSIPALLYFAFAVFFLPES 186 (592)
Q Consensus 163 ~~f~i~~i~~~~~~~l~~~~~pEs 186 (592)
..+....++..+.+ +.++.+|+.
T Consensus 409 ~g~~~i~vll~iGl-~~L~~v~~~ 431 (438)
T COG2270 409 AGVLSIIVLLLIGL-LLLLRVKVP 431 (438)
T ss_pred hHHHHHHHHHHhhH-hhEEeecCC
Confidence 66655555554433 445666654
No 148
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.88 E-value=1.1e-07 Score=105.13 Aligned_cols=150 Identities=23% Similarity=0.238 Sum_probs=127.9
Q ss_pred HHHHHHHH-HHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHH
Q 007702 25 IAGAIVYI-KKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLL 103 (592)
Q Consensus 25 ~~~~~~~i-~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l 103 (592)
+...+|.+ ++.+|.++...|++.+++.+|+++|+++.+.+.+++++++.+..+.++++++.+..+++++.+..++.-++
T Consensus 237 ~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l 316 (524)
T PF05977_consen 237 VWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFL 316 (524)
T ss_pred HHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 33455655 56789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHH
Q 007702 104 DGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYF 176 (592)
Q Consensus 104 ~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~ 176 (592)
.|++.....+...+.+.+..|++.||+.++++++....+..++. ..++.+.+..|-+..+.+.++..++..
T Consensus 317 ~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGs--ll~G~la~~~g~~~al~~a~~~lll~~ 387 (524)
T PF05977_consen 317 AGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGS--LLWGFLADHFGVRTALLIAGAALLLSA 387 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHH--HHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 99999988888889999999999999999999988888888873 345555666788888876665544433
No 149
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.87 E-value=1.1e-10 Score=126.95 Aligned_cols=120 Identities=31% Similarity=0.491 Sum_probs=90.2
Q ss_pred EEEeecCCCCcccccccccCCCCCCCChHHHHHhhhcccchhhhhhhhccCCCCCCcccCcccccCCCChHHHhhh-chh
Q 007702 437 IYLHQEGVPGSRRGSLVSVPGYDVPEEGEYIQAAALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEA-GVK 515 (592)
Q Consensus 437 ~wL~~~gr~~eA~~sl~~l~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~ 515 (592)
.||++|||.|||+++++++++.+ .++++.++.....+ +.++.+.+|++++++ .++
T Consensus 196 ~wL~~~~~~~~A~~~l~~~~~~~--~~~~~~~~~~~~~~----------------------~~~~~~~~~~~l~~~~~~~ 251 (451)
T PF00083_consen 196 RWLLSKGRDEEAEKVLRKLRGKE--IEDEEIEEIKAEKK----------------------ESQESKASWRDLFRNKKYR 251 (451)
T ss_pred ceecccccccccccccccccccc--cccccccccccccc----------------------cccccceeeeecccccccc
Confidence 59999999999999999998732 11111111111000 111111578888884 579
Q ss_pred HHHHHHHHHHHHHHhhcccchhhchHHHHHHcCchhhhhccCCCCchhHHHHHHHHHHHHhhhHhHHHHHhhhcCCC
Q 007702 516 RALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRR 592 (592)
Q Consensus 516 r~l~i~~~~~~~qQ~sGin~i~~Y~~~i~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~a~~lvd~~GRR 592 (592)
|++++++.++++|+++|++.+.+|.+.+++..|. +++ ...+.+.++..+++++++.+++||+|||
T Consensus 252 ~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~---------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~GRr 316 (451)
T PF00083_consen 252 KRLLIALLLQFFQQFSGINFIFYYSPSIFENAGI---------SNS---FLATLILGLVNFLGTLLAIFLIDRFGRR 316 (451)
T ss_pred cccccccccccccccccccccccccccccccccc---------ccc---cccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999998885 122 5667777788889999999999999998
No 150
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.87 E-value=6.4e-08 Score=105.15 Aligned_cols=155 Identities=16% Similarity=0.082 Sum_probs=102.1
Q ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHH---HHHHHHHh--hccHHHHHHHHHHH
Q 007702 30 VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF---VSGLVMLW--SPNVYVLCIARLLD 104 (592)
Q Consensus 30 ~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~---i~~~~~~~--s~~~~~ll~~R~l~ 104 (592)
.++++..|.+....++..+.+.++.+++.++.|+++||+|+++....+.++.. ++.+.... ..+.+...+.-++.
T Consensus 276 ~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (438)
T TIGR00712 276 TYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVI 355 (438)
T ss_pred HHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 44556679998889999999999999999999999999975432222322221 22222222 22334333444455
Q ss_pred HhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhH-HHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhc
Q 007702 105 GFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGG-MFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFL 183 (592)
Q Consensus 105 G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G-~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~ 183 (592)
|++...........+.|.+|++.||...++.+....+| ..++ +...+...+..+|...+.+..+..++.+++.++.+
T Consensus 356 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~g--p~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 433 (438)
T TIGR00712 356 GFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAA--SAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM 433 (438)
T ss_pred HHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhc--chhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 55432222223356789999999999999988776655 4555 33344445566899999888877777777778888
Q ss_pred cCC
Q 007702 184 PES 186 (592)
Q Consensus 184 pEs 186 (592)
||.
T Consensus 434 ~~~ 436 (438)
T TIGR00712 434 IGE 436 (438)
T ss_pred hhc
Confidence 885
No 151
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.87 E-value=2.3e-07 Score=98.85 Aligned_cols=141 Identities=16% Similarity=0.129 Sum_probs=111.2
Q ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhh
Q 007702 30 VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVG 109 (592)
Q Consensus 30 ~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g 109 (592)
+.+.++.|.+....+.+.+...++..+..++.|++.||+|+|+++..+.++..++.+...++++.+.+++..++.|++.+
T Consensus 229 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 308 (382)
T PRK11128 229 AIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFT 308 (382)
T ss_pred HHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 33446789998889999998889999999999999999999999999999988888888888999999999999999999
Q ss_pred hhhhHHHHHHHhhcCccccchhhHHHH-HHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHH
Q 007702 110 LAVTLVPLYISETAPSEIRGRLNTLPQ-FTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALL 174 (592)
Q Consensus 110 ~~~~~~~~~i~E~~p~~~Rg~~~~~~~-~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~ 174 (592)
...+....++.+. +++++++..++.+ +...+|..++ +..++.+.+..++ .++++.+++.++
T Consensus 309 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig--~~i~G~l~~~~g~-~~~~~~~~~~~~ 370 (382)
T PRK11128 309 VCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIM--TVLSGFLYQHLGA-GVFWVMALVALP 370 (382)
T ss_pred HHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhccH-HHHHHHHHHHHH
Confidence 9888888898887 5555688888765 4455666666 3444555556566 455555555544
No 152
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.86 E-value=2.6e-08 Score=106.89 Aligned_cols=186 Identities=23% Similarity=0.303 Sum_probs=146.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH-HcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCc-hHHHHHHHHH
Q 007702 4 AALVAIAATIGNFLQGWDNATIAGAI-VYIKK-DLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGR-RPMLILSSVL 80 (592)
Q Consensus 4 ~~~~~~~~~l~~~~~g~~~~~~~~~~-~~i~~-~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GR-K~~li~~~~l 80 (592)
.|..+.++.+..|+.+....++.+.. ||+++ |.+.+.+-.|+++++..+|.++++++.|..+.|.|. |+.++.+.++
T Consensus 32 ~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii 111 (488)
T KOG2325|consen 32 NWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLI 111 (488)
T ss_pred chHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHH
Confidence 35566677778888888877776644 44443 356666889999999999999999999999999986 8889999999
Q ss_pred HHHHHHHH-Hhh---c-cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHh
Q 007702 81 YFVSGLVM-LWS---P-NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL 155 (592)
Q Consensus 81 ~~i~~~~~-~~s---~-~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~ 155 (592)
.++++++. ... + ..+.++++|++.|+|.|.. +..-.|+++....++|.++++....+..+|..+|+.+.....-
T Consensus 112 ~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~ 190 (488)
T KOG2325|consen 112 AIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTP 190 (488)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhh
Confidence 99999888 332 3 5788999999999998765 6678899999999999999999888888999888666554432
Q ss_pred cCCCc-----------hhHHHHHHHHHHHHHHHHHHhhccCChhHH
Q 007702 156 LASPS-----------WRLMLGVLSIPALLYFAFAVFFLPESPRWL 190 (592)
Q Consensus 156 ~~~~~-----------Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~l 190 (592)
....| +..+-|+.++..++.+++..+++.|.++--
T Consensus 191 Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~ 236 (488)
T KOG2325|consen 191 LGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGI 236 (488)
T ss_pred hcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCc
Confidence 22222 445667888888888888888899986643
No 153
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.86 E-value=2.4e-07 Score=102.32 Aligned_cols=156 Identities=12% Similarity=0.116 Sum_probs=115.2
Q ss_pred HHHHHHHHcCCCchHHHHHHH-HHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHH---Hhh-ccHHHHHHHHH
Q 007702 28 AIVYIKKDLNLGTTVEGLVVA-MSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM---LWS-PNVYVLCIARL 102 (592)
Q Consensus 28 ~~~~i~~~~~~s~~~~gli~s-~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~---~~s-~~~~~ll~~R~ 102 (592)
..+++.+++|++..+.+++.. ...++.++|.++.|+++||+|||+.++++.++.+++.++. ... ++.+.+.+.-+
T Consensus 245 ~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~ 324 (491)
T PRK11010 245 TTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVF 324 (491)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 445667789999999999874 5668999999999999999999998887766655544332 232 45555555667
Q ss_pred HHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhh
Q 007702 103 LDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFF 182 (592)
Q Consensus 103 l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~ 182 (592)
+..++.|...+...++..+.+|++.++...++.+....+|..++.. ..+...+..||+..|.+.++++++.+++.. +
T Consensus 325 l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~--~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~-~ 401 (491)
T PRK11010 325 FENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGP--VAGWFVEAHGWPTFYLFSVAAAVPGLLLLL-V 401 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhChHHHHHHHHHHHHHHHHHHH-H
Confidence 7677777777777889999999999999999998888888776532 344445566899999888888777554443 3
Q ss_pred ccCC
Q 007702 183 LPES 186 (592)
Q Consensus 183 ~pEs 186 (592)
++++
T Consensus 402 ~~~~ 405 (491)
T PRK11010 402 CRQT 405 (491)
T ss_pred HHhc
Confidence 3443
No 154
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.84 E-value=9e-08 Score=100.66 Aligned_cols=118 Identities=15% Similarity=0.185 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHcCCCchHHHHHHHHHH-HHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhh---------
Q 007702 22 NATIAGAIVYIKKDLNLGTTVEGLVVAMSL-IGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS--------- 91 (592)
Q Consensus 22 ~~~~~~~~~~i~~~~~~s~~~~gli~s~~~-lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s--------- 91 (592)
........|.+.+++|.+..+.+.+.++.. ++.+++.+++|++.||+|||+.++++.++..++..+..+.
T Consensus 225 ~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (356)
T TIGR00901 225 DSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGI 304 (356)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence 333444455555558999988888877655 6788999999999999999999999988888776655543
Q ss_pred --ccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHH
Q 007702 92 --PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTG 139 (592)
Q Consensus 92 --~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~ 139 (592)
++.+.+++..++.+++.+...+...+++.|.+|+++||+..++.+...
T Consensus 305 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 354 (356)
T TIGR00901 305 TFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLS 354 (356)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHH
Confidence 456777888899999999999999999999999999999999876554
No 155
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.83 E-value=1.3e-07 Score=98.60 Aligned_cols=175 Identities=19% Similarity=0.118 Sum_probs=129.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhc--CchHHHHHHHHH-HH
Q 007702 7 VAIAATIGNFLQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL--GRRPMLILSSVL-YF 82 (592)
Q Consensus 7 ~~~~~~l~~~~~g~~~~~~~~~~~-~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~--GRK~~li~~~~l-~~ 82 (592)
.++.++++++........+.-..| ++.+..|.+...+++..+.+-++.+.|++++|+++||+ |||.+.-+...+ ..
T Consensus 253 ~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~ 332 (448)
T COG2271 253 LIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLIT 332 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 345566677777777766666554 57778899999999999999999999999999999996 777666544444 44
Q ss_pred HHHHHHHhhc--cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhh-HHHHHHHHHHHhHhcCCC
Q 007702 83 VSGLVMLWSP--NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSG-GMFLAYCMVFGMSLLASP 159 (592)
Q Consensus 83 i~~~~~~~s~--~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~-G~~l~~~~~~~~~~~~~~ 159 (592)
++.+..-.++ |+++..++-++.|+.+-+..-+.-....|+.|++--|.+.|+..++.-+ |..++..+ .....+..
T Consensus 333 ~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~--~g~i~d~~ 410 (448)
T COG2271 333 ASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLP--LGYIADTW 410 (448)
T ss_pred HHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCc--ceeeEecC
Confidence 4444444455 4588888889999988777777788889999999999999999888777 66665222 22334557
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhc
Q 007702 160 SWRLMLGVLSIPALLYFAFAVFFL 183 (592)
Q Consensus 160 ~Wr~~f~i~~i~~~~~~~l~~~~~ 183 (592)
+|...|.+..+.+++..++...+.
T Consensus 411 gW~g~Fi~~~~~a~l~~lll~~~~ 434 (448)
T COG2271 411 GWDGGFIVLSIAALLAILLLLPVW 434 (448)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHH
Confidence 999999888777776555444443
No 156
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.82 E-value=1.2e-07 Score=104.13 Aligned_cols=152 Identities=16% Similarity=0.041 Sum_probs=104.9
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCch-------HHHHHHHHHHHHHHHHHHhhccHHHHHHH
Q 007702 28 AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRR-------PMLILSSVLYFVSGLVMLWSPNVYVLCIA 100 (592)
Q Consensus 28 ~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK-------~~li~~~~l~~i~~~~~~~s~~~~~ll~~ 100 (592)
..+++.+++|++....+.+.+++.++.+++.++.|+++||+||| ..+.+..++..+..++....++.+..++.
T Consensus 275 ~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~ 354 (476)
T PLN00028 275 IAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVV 354 (476)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 33456778899999999999999999999999999999999876 23333333333334444555666666666
Q ss_pred HHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHH
Q 007702 101 RLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAV 180 (592)
Q Consensus 101 R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~ 180 (592)
-++.+++.+...+....++.++. ++.||...++...+..+|..+++.+. . .....+|+..|++.+++.++..++ .
T Consensus 355 ~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~-~--~~~~~~y~~~f~~~~~~~~i~~~~-~ 429 (476)
T PLN00028 355 MILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLF-F--TGSSYSTETGISLMGVMIIACTLP-V 429 (476)
T ss_pred HHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHH-H--hcCCccHhhHHHHHHHHHHHHHHH-H
Confidence 66667766666566666667765 46899999998887777777764332 1 223457999998888777765444 3
Q ss_pred hhcc
Q 007702 181 FFLP 184 (592)
Q Consensus 181 ~~~p 184 (592)
++++
T Consensus 430 ~~~~ 433 (476)
T PLN00028 430 AFIH 433 (476)
T ss_pred Hhee
Confidence 4443
No 157
>PRK09669 putative symporter YagG; Provisional
Probab=98.81 E-value=8.2e-08 Score=104.48 Aligned_cols=160 Identities=13% Similarity=0.171 Sum_probs=117.2
Q ss_pred HHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhh----cCc-hHHHHHHHHHHHHHHHHHHhhcc------HH
Q 007702 27 GAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW----LGR-RPMLILSSVLYFVSGLVMLWSPN------VY 95 (592)
Q Consensus 27 ~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr----~GR-K~~li~~~~l~~i~~~~~~~s~~------~~ 95 (592)
....++.+++|++....|++.++..+..++..|+.|.++|| +|| |+.++++.++.+++.++..+.|+ ++
T Consensus 31 ~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~ 110 (444)
T PRK09669 31 FLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKII 110 (444)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHH
Confidence 35567889999999999999999999999999999999998 787 45566777777777766555543 45
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHhhc-CccccchhhHHHHHHHhhHHHHHHHHHHH--hHhc---CCCchhHHHHHHH
Q 007702 96 VLCIARLLDGFGVGLAVTLVPLYISETA-PSEIRGRLNTLPQFTGSGGMFLAYCMVFG--MSLL---ASPSWRLMLGVLS 169 (592)
Q Consensus 96 ~ll~~R~l~G~~~g~~~~~~~~~i~E~~-p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~--~~~~---~~~~Wr~~f~i~~ 169 (592)
.+++.-++.+.+.........++.+|+. ++++|+++.++...+..+|..++...... .... ...+|+..+.+.+
T Consensus 111 ~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ 190 (444)
T PRK09669 111 YACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMG 190 (444)
T ss_pred HHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 5555666666666666666668899998 46889999888888888877766443222 1121 1358998888888
Q ss_pred HHHHHHHHHHHhhccCC
Q 007702 170 IPALLYFAFAVFFLPES 186 (592)
Q Consensus 170 i~~~~~~~l~~~~~pEs 186 (592)
++.++..++.++..+|.
T Consensus 191 ii~~v~~~~~~~~~~e~ 207 (444)
T PRK09669 191 LLGVVLFFCCFFMTKER 207 (444)
T ss_pred HHHHHHHHHHhCCeEEe
Confidence 87776666666666664
No 158
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.81 E-value=6e-07 Score=96.30 Aligned_cols=145 Identities=12% Similarity=0.014 Sum_probs=108.0
Q ss_pred HHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhh-----ccHHHHHHHHHHHH
Q 007702 31 YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS-----PNVYVLCIARLLDG 105 (592)
Q Consensus 31 ~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s-----~~~~~ll~~R~l~G 105 (592)
++.++++.++.+.++......++..++.++.|+++||+|+|+.+.++.++..++.++..+. ++++.+++.-++.|
T Consensus 241 ~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g 320 (406)
T PRK15402 241 ILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYA 320 (406)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHH
Confidence 3567789998888888888888999999999999999999999999888877776666543 35667778888999
Q ss_pred hhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHH
Q 007702 106 FGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAF 178 (592)
Q Consensus 106 ~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l 178 (592)
++.+...+........ .++++||+..+..++...+|..++ ........+..+|....+...+..++.+++
T Consensus 321 ~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 390 (406)
T PRK15402 321 FGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVG--IELSKHAYLGGGNGLFNLFNLANGLLWLLL 390 (406)
T ss_pred HHHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHH--HHHHHhcccCCchHHHHHHHHHHHHHHHHH
Confidence 9998877766555543 445899999999999888888877 344444555556665554444444443333
No 159
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.80 E-value=2.8e-07 Score=91.70 Aligned_cols=162 Identities=17% Similarity=0.195 Sum_probs=119.4
Q ss_pred HHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhh-------cc
Q 007702 21 DNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS-------PN 93 (592)
Q Consensus 21 ~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s-------~~ 93 (592)
....++...|.+++.+|++.++...+.+.-.+|..+| ++.|.+.|++|.+.+++++.+...++..++..+ ++
T Consensus 17 t~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~ 95 (250)
T PF06813_consen 17 TTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLP 95 (250)
T ss_pred cccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccc
Confidence 4556666778899999999999999999999999875 888999999999999999999999998877653 46
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHH
Q 007702 94 VYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPAL 173 (592)
Q Consensus 94 ~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~ 173 (592)
+|.+.+..++.|.+.+...+.+.....+.+| ++||.+.++.-....++..+-..+. . .......-...+.+...+.+
T Consensus 96 ~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~-~-~~f~~~~~~fll~la~~~~~ 172 (250)
T PF06813_consen 96 VWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIY-S-AFFGDDPSSFLLFLAVLPAV 172 (250)
T ss_pred hHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHH-H-HHcCCChHHHHHHHHHHHHH
Confidence 7888888889888887777777777778898 5799999998888777765542222 2 22223333444434344444
Q ss_pred HHHHHHHhhccCCh
Q 007702 174 LYFAFAVFFLPESP 187 (592)
Q Consensus 174 ~~~~l~~~~~pEsP 187 (592)
+ .++..+++...|
T Consensus 173 v-~l~~~~~vr~~~ 185 (250)
T PF06813_consen 173 V-CLVAMFFVRPVP 185 (250)
T ss_pred H-HHHHhhheeccC
Confidence 4 334444544433
No 160
>PRK10054 putative transporter; Provisional
Probab=98.79 E-value=1.6e-07 Score=100.62 Aligned_cols=150 Identities=11% Similarity=0.150 Sum_probs=114.9
Q ss_pred HcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHhhhhhhhh
Q 007702 35 DLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS-PNVYVLCIARLLDGFGVGLAVT 113 (592)
Q Consensus 35 ~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s-~~~~~ll~~R~l~G~~~g~~~~ 113 (592)
+.+.+....+++.+...+......++.|.+.||+++|+.+.++.++..++.+...++ ++++.+++..++.|++.+...|
T Consensus 238 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p 317 (395)
T PRK10054 238 DSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAP 317 (395)
T ss_pred ccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHh
Confidence 445555667777777777777777889999999999999999988888887777664 5777777888999999988888
Q ss_pred HHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhccCCh
Q 007702 114 LVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESP 187 (592)
Q Consensus 114 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP 187 (592)
....++.+..|++.|+...+..+ ...+|..++ +..++.+.+..+....|++.++...+..++...-+.|.|
T Consensus 318 ~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~G--p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (395)
T PRK10054 318 GEYMLIDHIAPPGMKASYFSAQS-LGWLGAAIN--PLVSGVILTTLPPWSLFVILALAIVAAWLLMLKGMRARP 388 (395)
T ss_pred hHHHHHHHhCCcccceehHhHHH-HHHHHHHHH--HHHHHHHHHHcChhhHHHHHHHHHHHHHHHHHhccccCc
Confidence 88899999999999999887654 444677777 444455556668788887776666665656556666655
No 161
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.79 E-value=2.8e-08 Score=101.19 Aligned_cols=180 Identities=16% Similarity=0.116 Sum_probs=118.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC---------------c-hHHHH-HHHHHHHHHHHHHhhHHhh
Q 007702 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLG---------------T-TVEGL-VVAMSLIGATAITTCSGPI 64 (592)
Q Consensus 2 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s---------------~-~~~gl-i~s~~~lg~~ig~~~~G~l 64 (592)
||..+..+..++++-...|..-.+..-+-..-..+++. . +.... =.-+..+.-.-|.++.+.+
T Consensus 325 rkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~i 404 (528)
T KOG0253|consen 325 RKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVI 404 (528)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHH
Confidence 45667777777777777666554443332221212211 1 00000 1122334556788999999
Q ss_pred hhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHH
Q 007702 65 SDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMF 144 (592)
Q Consensus 65 ~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~ 144 (592)
.||+|||++|..+.+++.+..++...+.+.....+.-+..-+++.+.+.++++|..|++|+..|+...|.......+|.+
T Consensus 405 verlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI 484 (528)
T KOG0253|consen 405 VERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGI 484 (528)
T ss_pred HHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhh
Confidence 99999999999999999999888877654433344444444556667778889999999999999999999999999999
Q ss_pred HHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhcc-CC
Q 007702 145 LAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLP-ES 186 (592)
Q Consensus 145 l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~p-Es 186 (592)
+++.+. + ....+-..+..+.+.+.++..+. ..++| |+
T Consensus 485 ~~p~iA--~--~~e~s~sl~i~vy~~~~ilagIa-vcffPiEt 522 (528)
T KOG0253|consen 485 FSPVIA--M--RAELSTSLPIFVYGALFILAGIA-VCFFPIET 522 (528)
T ss_pred hhhHHH--H--HhccceeehHHHHHHHHHHHHHH-heeeeecc
Confidence 996555 2 12223345555667766665544 44455 76
No 162
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.78 E-value=4.5e-07 Score=96.76 Aligned_cols=147 Identities=14% Similarity=-0.031 Sum_probs=107.4
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHH-HHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHh------hccHHHHHHH
Q 007702 28 AIVYIKKDLNLGTTVEGLVVAMSL-IGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW------SPNVYVLCIA 100 (592)
Q Consensus 28 ~~~~i~~~~~~s~~~~gli~s~~~-lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~------s~~~~~ll~~ 100 (592)
..+.+.++.|++.++.+++..... ++..++.++.|++.||+|+|+.+.++.++.++..+.... .++...++..
T Consensus 230 ~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSC 309 (390)
T ss_pred HhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHH
Confidence 344444568999999999888775 466778999999999999999998877765333322221 2334444555
Q ss_pred HHHHHhhhhhhhhHHHHHHHhhcCc-cccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHH
Q 007702 101 RLLDGFGVGLAVTLVPLYISETAPS-EIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYF 176 (592)
Q Consensus 101 R~l~G~~~g~~~~~~~~~i~E~~p~-~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~ 176 (592)
.++.+++.|...+....++.+..++ +.+|+..++.+....+|..+++. ..+...+..||+..|.+.+++.++..
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~--~~G~l~~~~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 310 SAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASS--IAGYLTDRFGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 6667777888878888887777776 88999999999999999998844 44445556688888887776665533
No 163
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.73 E-value=2.5e-07 Score=99.73 Aligned_cols=158 Identities=15% Similarity=0.028 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc--CCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHH-HHHHHHHHHHHHHHH
Q 007702 12 TIGNFLQGWDNATIAGAIVYIKKDL--NLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPM-LILSSVLYFVSGLVM 88 (592)
Q Consensus 12 ~l~~~~~g~~~~~~~~~~~~i~~~~--~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~-li~~~~l~~i~~~~~ 88 (592)
.+.++........+...+|.+.+++ +.+..+.+++.+...++..+|.++.|+++||++||+. ++...++.+++.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~ 327 (412)
T TIGR02332 248 TLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLA 327 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHH
Confidence 3444444444555555666666664 5667788999999999999999999999999997775 344443444433222
Q ss_pred HhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCC-chhHHHHH
Q 007702 89 LWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASP-SWRLMLGV 167 (592)
Q Consensus 89 ~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~-~Wr~~f~i 167 (592)
...++....+++-++.+++.....+...+...|.+|++.|+...++.+....+|..+++.+ .....+.. +|+..+++
T Consensus 328 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~--~g~i~~~~g~~~~~~~~ 405 (412)
T TIGR02332 328 SATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFL--IGILKDATGSFNSGLWF 405 (412)
T ss_pred HhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhh--cccccccCCCCchhHHH
Confidence 2233322222222233333333334444556788999999999999999999999888433 33344444 59988876
Q ss_pred HHHH
Q 007702 168 LSIP 171 (592)
Q Consensus 168 ~~i~ 171 (592)
.++.
T Consensus 406 ~~~~ 409 (412)
T TIGR02332 406 VAAL 409 (412)
T ss_pred HHHH
Confidence 5543
No 164
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.73 E-value=8.6e-07 Score=88.64 Aligned_cols=164 Identities=26% Similarity=0.396 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCc--hHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHH
Q 007702 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGT--TVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM 88 (592)
Q Consensus 11 ~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~--~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~ 88 (592)
.....+...++........+.+..+++.+. ...++..+.+.++..++.++.|.++||+|||+.++.+.....++.++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 86 (338)
T COG0477 7 LALAALLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLL 86 (338)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHH
Confidence 344455555667777777888888887766 478999999999999999999999999999988888887766666777
Q ss_pred Hhhcc--HHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCc-cccchhhHHHHH-HHhhHHHHHHHHHHHhHhcCCCchhHH
Q 007702 89 LWSPN--VYVLCIARLLDGFGVGLAVTLVPLYISETAPS-EIRGRLNTLPQF-TGSGGMFLAYCMVFGMSLLASPSWRLM 164 (592)
Q Consensus 89 ~~s~~--~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~-~~Rg~~~~~~~~-~~~~G~~l~~~~~~~~~~~~~~~Wr~~ 164 (592)
.+..+ .+.+++.|++.|++.+...+....++.|..|. +.|+...+.... ...+|..+++............+||..
T Consensus 87 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (338)
T COG0477 87 ALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAA 166 (338)
T ss_pred HhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH
Confidence 77766 89999999999999999999999999999998 678888888777 466777776533222211145689997
Q ss_pred HHHHHHHHHH
Q 007702 165 LGVLSIPALL 174 (592)
Q Consensus 165 f~i~~i~~~~ 174 (592)
|.+.......
T Consensus 167 ~~~~~~~~~~ 176 (338)
T COG0477 167 FLLAALLGLL 176 (338)
T ss_pred HHHHHHHHHH
Confidence 7666555543
No 165
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.72 E-value=3.4e-07 Score=100.58 Aligned_cols=176 Identities=13% Similarity=0.144 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhh----hcCc-hHHHHHHHHHHHHHH
Q 007702 12 TIGNFLQGWDNATIAG-AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISD----WLGR-RPMLILSSVLYFVSG 85 (592)
Q Consensus 12 ~l~~~~~g~~~~~~~~-~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~D----r~GR-K~~li~~~~l~~i~~ 85 (592)
.++.+...+....+.+ ...++.+.+|++....|.+..+..+.-++..++.|.++| |+|| |+.++++.++++++.
T Consensus 12 g~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~ 91 (473)
T PRK10429 12 GFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVL 91 (473)
T ss_pred ccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHH
Confidence 3444545555555555 445677888999999999999999999999999999999 6698 666677888877776
Q ss_pred HHHHhhcc------HHHHHHHHHHHHhhhhhhhhHHHHHHHhhc-CccccchhhHHHHHHHhhHHHHHHHHHHHh--Hhc
Q 007702 86 LVMLWSPN------VYVLCIARLLDGFGVGLAVTLVPLYISETA-PSEIRGRLNTLPQFTGSGGMFLAYCMVFGM--SLL 156 (592)
Q Consensus 86 ~~~~~s~~------~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~-p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~--~~~ 156 (592)
+++...++ +..+++.-++.+++.....+...++++|+. ++++|.++.++...+..+|.++........ ...
T Consensus 92 ~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g 171 (473)
T PRK10429 92 FLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVG 171 (473)
T ss_pred HHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 66654331 334555566667777777777778899999 589999999987776666644442222111 111
Q ss_pred ---CCCchhHHHHHHHHHHHHHHHHHHhhccCCh
Q 007702 157 ---ASPSWRLMLGVLSIPALLYFAFAVFFLPESP 187 (592)
Q Consensus 157 ---~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP 187 (592)
+..+|+....+.+++.++..++.++..+|.+
T Consensus 172 ~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~ 205 (473)
T PRK10429 172 GGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVY 205 (473)
T ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHcCceecC
Confidence 1236888877777776665666666677753
No 166
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.72 E-value=3.6e-07 Score=111.17 Aligned_cols=147 Identities=13% Similarity=0.060 Sum_probs=113.6
Q ss_pred HHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhh-----------------
Q 007702 29 IVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS----------------- 91 (592)
Q Consensus 29 ~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s----------------- 91 (592)
.+++++.+|.+....+++.+.+.+|.++|.++.|++++++++++.+.++.++..++.+...+.
T Consensus 249 p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 328 (1140)
T PRK06814 249 PLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVF 328 (1140)
T ss_pred HHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhh
Confidence 344566789999999999999999999999999999998887777766666665555544442
Q ss_pred ---ccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHH
Q 007702 92 ---PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVL 168 (592)
Q Consensus 92 ---~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~ 168 (592)
++.+.+++.-++.|++.+...+...+++.+.+|++.||+.+++.++...+|..+++.+.... .....++...+++.
T Consensus 329 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l-~~~~~~~~~~~~~~ 407 (1140)
T PRK06814 329 LSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALL-QALGFSIPWIILFI 407 (1140)
T ss_pred hcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHH-HHhccCHHHHHHHH
Confidence 67777888889999999999999999999999999999999999999999888886543222 22234566666555
Q ss_pred HHHHHHHH
Q 007702 169 SIPALLYF 176 (592)
Q Consensus 169 ~i~~~~~~ 176 (592)
+++.++..
T Consensus 408 ~~~~~~~~ 415 (1140)
T PRK06814 408 ALANLIVA 415 (1140)
T ss_pred HHHHHHHH
Confidence 54444433
No 167
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.70 E-value=1.8e-06 Score=89.01 Aligned_cols=154 Identities=17% Similarity=0.176 Sum_probs=103.1
Q ss_pred HHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhh
Q 007702 32 IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLA 111 (592)
Q Consensus 32 i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~ 111 (592)
+-+++|++..+.+.+....+...++..++.|.++||+|||+.-++.+++++++++. -.+++++.++++|++.|++....
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~-k~~~~~~~L~~GRvlgGiaTSLL 138 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT-KHSSNYPVLLLGRVLGGIATSLL 138 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-HhccccHHHHHHHHHHHHHHHHH
Confidence 34689999999999999999999999999999999999999999999999999964 45688999999999999999988
Q ss_pred hhHHHHH-HHhhc----CccccchhhHHHH-HHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhccC
Q 007702 112 VTLVPLY-ISETA----PSEIRGRLNTLPQ-FTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPE 185 (592)
Q Consensus 112 ~~~~~~~-i~E~~----p~~~Rg~~~~~~~-~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pE 185 (592)
.+.--++ +.|.- |++..+...+... +...+-.+++.++.-...-....+-..||....++.++..+++....+|
T Consensus 139 fS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~E 218 (354)
T PF05631_consen 139 FSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPE 218 (354)
T ss_pred HHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccc
Confidence 8876554 56653 2222222222111 1111111111111111111112244778877666666666665566677
Q ss_pred C
Q 007702 186 S 186 (592)
Q Consensus 186 s 186 (592)
.
T Consensus 219 N 219 (354)
T PF05631_consen 219 N 219 (354)
T ss_pred c
Confidence 5
No 168
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.68 E-value=2.4e-06 Score=91.58 Aligned_cols=143 Identities=13% Similarity=0.012 Sum_probs=107.8
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHH-HHHHHHHHHhhccHHHHHHHHHHHHh
Q 007702 28 AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVL-YFVSGLVMLWSPNVYVLCIARLLDGF 106 (592)
Q Consensus 28 ~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l-~~i~~~~~~~s~~~~~ll~~R~l~G~ 106 (592)
..|.+.+++|++....+++.+.+.++..++.++.+++.||.+ |+.++.+.++ ..+..++..+.++.+.+.+..++.|+
T Consensus 239 ~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~ 317 (394)
T PRK10213 239 IRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGL 317 (394)
T ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 346677888999988999999999999999999999999964 4444444444 34444555566777888888999999
Q ss_pred hhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHH
Q 007702 107 GVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALL 174 (592)
Q Consensus 107 ~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~ 174 (592)
+.+...+....++.+..| +.+++..+.......+|..++ +..++...+..+++.++...++..++
T Consensus 318 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G--~~l~G~l~~~~g~~~~~~~~~~~~~~ 382 (394)
T PRK10213 318 TFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCG--AAIGGYALDNIGLTSPLMLSGTLMLL 382 (394)
T ss_pred HHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHH--HHHHHHHHhccChhhHHHHHHHHHHH
Confidence 999998988989999887 446677777667777888777 44445556667888888776655444
No 169
>PRK09848 glucuronide transporter; Provisional
Probab=98.68 E-value=9.6e-07 Score=96.18 Aligned_cols=124 Identities=19% Similarity=0.283 Sum_probs=96.0
Q ss_pred HHHHH-HHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhc--cHHHHHHHHHH
Q 007702 27 GAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP--NVYVLCIARLL 103 (592)
Q Consensus 27 ~~~~~-i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~--~~~~ll~~R~l 103 (592)
...++ ++..+|.+....++......++.+++.++.+++.||+|+|+++.++.++.+++.++..+.+ +++.+++..++
T Consensus 249 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l 328 (448)
T PRK09848 249 ASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAI 328 (448)
T ss_pred hhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHH
Confidence 33444 3445676555555555555677888999999999999999999999998888887777654 56777777888
Q ss_pred HHhhhhhhhhHHHHHHHhhcCcc-------ccchhhHHHHHHHhhHHHHHHHHH
Q 007702 104 DGFGVGLAVTLVPLYISETAPSE-------IRGRLNTLPQFTGSGGMFLAYCMV 150 (592)
Q Consensus 104 ~G~~~g~~~~~~~~~i~E~~p~~-------~Rg~~~~~~~~~~~~G~~l~~~~~ 150 (592)
.|++.+...+...++.+|..|.+ .+|...++.++...+|..++..+.
T Consensus 329 ~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~ 382 (448)
T PRK09848 329 ASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIP 382 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998754 358888898888888888775443
No 170
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.67 E-value=7.5e-07 Score=97.61 Aligned_cols=123 Identities=16% Similarity=0.239 Sum_probs=104.0
Q ss_pred HHHHH-HHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHh----hccHHHHHHH
Q 007702 26 AGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW----SPNVYVLCIA 100 (592)
Q Consensus 26 ~~~~~-~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~----s~~~~~ll~~ 100 (592)
...+| ++++.+|.+..+.++......++..++.++.|++.||+|||+.+.++.++.+++.+++.+ ..+++.+.+.
T Consensus 275 ~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (485)
T TIGR00711 275 FYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALP 354 (485)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHH
Confidence 33444 455668999999999999999999999999999999999999999999888888877763 2356667777
Q ss_pred HHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHH
Q 007702 101 RLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYC 148 (592)
Q Consensus 101 R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 148 (592)
-++.|++.+...+.......+..|+++||.+.++.++...+|..+++.
T Consensus 355 ~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~ 402 (485)
T TIGR00711 355 QFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTA 402 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 889999999888877888889999999999999999998888888743
No 171
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.67 E-value=1.4e-06 Score=91.57 Aligned_cols=159 Identities=16% Similarity=0.104 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhh-ccHHHH
Q 007702 19 GWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS-PNVYVL 97 (592)
Q Consensus 19 g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s-~~~~~l 97 (592)
+-....+...-|++++..|++.+..+++.-.+.++..+|..+.|+++|| +.|+.++...++.++..+...+. ++.+..
T Consensus 225 ~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~ 303 (394)
T COG2814 225 TGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALA 303 (394)
T ss_pred cchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHH
Confidence 3334556667899999999999999999999999999999999999999 99999999888877777666655 455566
Q ss_pred HHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHH
Q 007702 98 CIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFA 177 (592)
Q Consensus 98 l~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~ 177 (592)
++.-++.|+..+.......+-+++ .-|+.+....++++...++|..++ ...+....++.++....++.+++.++.++
T Consensus 304 ~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~G--A~lGG~v~~~~g~~~~~~~~a~l~~~a~~ 380 (394)
T COG2814 304 LALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALG--AALGGLVLDALGYAATGWVGAALLLLALL 380 (394)
T ss_pred HHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHH--HHHHHHHHHhhchHHHHHHHHHHHHHHHH
Confidence 666666777666555554555555 346789999999999999999888 44455556668999999998888877665
Q ss_pred HHHh
Q 007702 178 FAVF 181 (592)
Q Consensus 178 l~~~ 181 (592)
+.++
T Consensus 381 ~~~~ 384 (394)
T COG2814 381 LALL 384 (394)
T ss_pred HHHH
Confidence 5443
No 172
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.67 E-value=2.3e-06 Score=90.42 Aligned_cols=132 Identities=17% Similarity=0.265 Sum_probs=99.6
Q ss_pred HHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhh-----ccHHHHHHHHHHHH
Q 007702 31 YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS-----PNVYVLCIARLLDG 105 (592)
Q Consensus 31 ~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s-----~~~~~ll~~R~l~G 105 (592)
++.++++.++...+++.+...++..++.++.|++.||+|||+.+..+.++..++.+++.+. +....+++.-++.|
T Consensus 232 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 311 (385)
T TIGR00710 232 VYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVG 311 (385)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 4566899999999999999999999999999999999999999998888877776666543 23445566677889
Q ss_pred hhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHh-hHHHHHHHHHHHhHhcCCCchhHHHH
Q 007702 106 FGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGS-GGMFLAYCMVFGMSLLASPSWRLMLG 166 (592)
Q Consensus 106 ~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~-~G~~l~~~~~~~~~~~~~~~Wr~~f~ 166 (592)
++.+...+....+..|..| +.||...++.+.... +|.+.++... ...+..+|...+.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~---~~~~~~~~~~~~~ 369 (385)
T TIGR00710 312 IGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS---LIHGNTAWPMSLS 369 (385)
T ss_pred HHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH---hccccChHHHHHH
Confidence 9999888988899999887 578999998776544 4555554322 2233344554443
No 173
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.66 E-value=3.7e-07 Score=97.34 Aligned_cols=166 Identities=17% Similarity=0.162 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHcC----CCchHHHHHHHHHHHHHHHHHhhHHhhhhhc-CchHHHHHHHHHHHH
Q 007702 10 AATIGNFLQGWDNATIAG-AIVYIKKDLN----LGTTVEGLVVAMSLIGATAITTCSGPISDWL-GRRPMLILSSVLYFV 83 (592)
Q Consensus 10 ~~~l~~~~~g~~~~~~~~-~~~~i~~~~~----~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~-GRK~~li~~~~l~~i 83 (592)
.+...-+...++...+.. ...|+..+++ ++.+.+.-+.+.|..-.-+.++++|+++||+ |+|++++.+.+++.+
T Consensus 25 ~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~i 104 (498)
T COG3104 25 LIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAI 104 (498)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Confidence 334445555555544444 3346777777 8888887777777777777889999999995 999999999999999
Q ss_pred HHHHHHhhc--cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccc--cchhhHHHHHHHhhHHHHHHHHHHHhHhcCCC
Q 007702 84 SGLVMLWSP--NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEI--RGRLNTLPQFTGSGGMFLAYCMVFGMSLLASP 159 (592)
Q Consensus 84 ~~~~~~~s~--~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~--Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~ 159 (592)
+.++.+.+. ....+.++-.+.++|.|..=+....+++|+.|+++ |-...++..++.++|.++++.+ ........
T Consensus 105 Gh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i--~~~~~~~~ 182 (498)
T COG3104 105 GHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPII--TGLLAINY 182 (498)
T ss_pred HHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHH--HHHHHHhh
Confidence 999999884 78888999999999999999999999999999754 5567778888999999999544 45556677
Q ss_pred chhHHHHHHHHHHHHHHH
Q 007702 160 SWRLMLGVLSIPALLYFA 177 (592)
Q Consensus 160 ~Wr~~f~i~~i~~~~~~~ 177 (592)
+|...|.+.++-..+.++
T Consensus 183 g~~~gF~~aavGm~~gl~ 200 (498)
T COG3104 183 GWHVGFGLAAVGMIIGLV 200 (498)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 899999887776665443
No 174
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.66 E-value=2.4e-06 Score=90.95 Aligned_cols=147 Identities=11% Similarity=0.081 Sum_probs=103.3
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHh
Q 007702 28 AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW-SPNVYVLCIARLLDGF 106 (592)
Q Consensus 28 ~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~-s~~~~~ll~~R~l~G~ 106 (592)
..|++.+.+|.+....+++.+...++.+++.++.|++.||+|+|+.+.++.++.+++.++... .++.+..++..++.++
T Consensus 222 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 301 (382)
T PRK10091 222 IKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCA 301 (382)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 446677778999999999999999999999999999999999999999988888877765543 4555666666666676
Q ss_pred hhhhhhhHHH-HHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcC-CCchhHHHHHHHHHHHHHHHH
Q 007702 107 GVGLAVTLVP-LYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA-SPSWRLMLGVLSIPALLYFAF 178 (592)
Q Consensus 107 ~~g~~~~~~~-~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~-~~~Wr~~f~i~~i~~~~~~~l 178 (592)
+.+...+... ....+..|++.++... .+....+|..+++. ......+ ..+|+..+.+.++..++....
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~--~~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 371 (382)
T PRK10091 302 GLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAY--CGGMMLTLGLAYNYVALPAALLSFAAMSS 371 (382)
T ss_pred HHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHH--HhHHHHHcccCcchHHHHHHHHHHHHHHH
Confidence 6554444333 3344444555555443 35566788888743 3343334 467888888776666554433
No 175
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.64 E-value=5.1e-07 Score=94.77 Aligned_cols=149 Identities=20% Similarity=0.102 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcC-chHHHH-HHHHH-HHHHHHHHHh
Q 007702 15 NFLQGWDNATIAGAI-VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLG-RRPMLI-LSSVL-YFVSGLVMLW 90 (592)
Q Consensus 15 ~~~~g~~~~~~~~~~-~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~G-RK~~li-~~~~l-~~i~~~~~~~ 90 (592)
.+........+.... +++.+.++.+..+.+++.+.+.++.+++.++.|+++||++ ||+..+ ..... ..++......
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (379)
T TIGR00881 225 YVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWL 304 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Confidence 333333333333333 4456778999999999999999999999999999999863 333322 22212 2222222222
Q ss_pred --hccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHH
Q 007702 91 --SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLML 165 (592)
Q Consensus 91 --s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f 165 (592)
..+...+++..++.|+......+....++.|.+|++.||+..++.+....+|..+++ .....+.+..||++.|
T Consensus 305 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~--~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 305 NPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAG--LPLGYLADGFGWAGAF 379 (379)
T ss_pred CcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhh--hhHHHHHHhhcccccC
Confidence 234555666677777766666666778899999999999999999999999988874 3344455666777653
No 176
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.64 E-value=2.7e-06 Score=91.08 Aligned_cols=140 Identities=11% Similarity=0.042 Sum_probs=105.8
Q ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhh
Q 007702 30 VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVG 109 (592)
Q Consensus 30 ~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g 109 (592)
+++++.+|.+..+.|++.+...+|.++++++.+++.||+++|+++..+. +.++..++..+.++++.+++.-++.|++.+
T Consensus 230 ~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~g 308 (393)
T PRK11195 230 AWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQHSLLPAYPLLILIGALGG 308 (393)
T ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHhhh
Confidence 4566778999999999999999999999999999999999998888775 444444555667777777778888999998
Q ss_pred hhhhHHHHHHHhhcCccc-cchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHH
Q 007702 110 LAVTLVPLYISETAPSEI-RGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIP 171 (592)
Q Consensus 110 ~~~~~~~~~i~E~~p~~~-Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~ 171 (592)
...+...+.+.+..|++. +|+..++.+....+|..++..+.... ......++..|...+.+
T Consensus 309 ~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 370 (393)
T PRK11195 309 FFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLL 370 (393)
T ss_pred hhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHH
Confidence 888878888888777665 79999999999999988885443322 22223444444444443
No 177
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.63 E-value=3.1e-06 Score=89.83 Aligned_cols=157 Identities=17% Similarity=0.098 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCc---hHHHHH-HHHHHHHHHHHHHh
Q 007702 15 NFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGR---RPMLIL-SSVLYFVSGLVMLW 90 (592)
Q Consensus 15 ~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GR---K~~li~-~~~l~~i~~~~~~~ 90 (592)
.+........+...+|.+.++.+.+.. .+...++..++..++ .++++||+.| |+.... ..++..+..+..++
T Consensus 201 ~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~ 276 (368)
T TIGR00903 201 LGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAF 276 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 333333344444556665567777654 566666655555555 4667777654 443332 34444444444455
Q ss_pred hccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHH
Q 007702 91 SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSI 170 (592)
Q Consensus 91 s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i 170 (592)
+.+....++.-++.|++....++..+.+.+|.+|++.||+..++.+....+|.+.++...... . .+-...|.+.++
T Consensus 277 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~-~---~~~~~~f~~~~~ 352 (368)
T TIGR00903 277 ELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLF-I---SSAEAYFTFLAI 352 (368)
T ss_pred ccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHH-h---cCHHHHHHHHHH
Confidence 555445455556777777777788889999999999999999999999999987775444222 2 166777777777
Q ss_pred HHHHHHHHH
Q 007702 171 PALLYFAFA 179 (592)
Q Consensus 171 ~~~~~~~l~ 179 (592)
+.++.++..
T Consensus 353 ~~~i~~~~~ 361 (368)
T TIGR00903 353 LITIAFAIA 361 (368)
T ss_pred HHHHHHHHH
Confidence 777655443
No 178
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.63 E-value=2.9e-06 Score=90.96 Aligned_cols=174 Identities=20% Similarity=0.206 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcC-chHHHHHHHHHHHHHHHHHH
Q 007702 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLG-RRPMLILSSVLYFVSGLVML 89 (592)
Q Consensus 11 ~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~G-RK~~li~~~~l~~i~~~~~~ 89 (592)
++.-+|++.+..+.+.|.++.+-++.|++..++|++.++..+..+++++++|.++||++ +|+.+.+..++.++..+...
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~ 86 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLA 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 44556666777777888888888889999999999999999999999999999999986 67777777777777777777
Q ss_pred hhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHH--HhHhcCCCchhHHHHH
Q 007702 90 WSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVF--GMSLLASPSWRLMLGV 167 (592)
Q Consensus 90 ~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~--~~~~~~~~~Wr~~f~i 167 (592)
+.++++.+++.-++..+......|..-++..+.... ++.--+-.-+++++|..++..... .....+..+....+++
T Consensus 87 ~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i 164 (400)
T PF03825_consen 87 FSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--RGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYI 164 (400)
T ss_pred HhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--ccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHH
Confidence 788888888887777777777777766666666652 222223334455566555432211 1111112223344555
Q ss_pred HHHHHHHHHHHHHhhccCCh
Q 007702 168 LSIPALLYFAFAVFFLPESP 187 (592)
Q Consensus 168 ~~i~~~~~~~l~~~~~pEsP 187 (592)
.++..++.. ...+.+|+.|
T Consensus 165 ~~~~~~ll~-~~~l~lp~~~ 183 (400)
T PF03825_consen 165 AAILSLLLA-GFALFLPKTP 183 (400)
T ss_pred HHHHHHHHH-HHHHhCCCCc
Confidence 554444322 3345678877
No 179
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.63 E-value=1.2e-06 Score=92.11 Aligned_cols=231 Identities=14% Similarity=0.129 Sum_probs=160.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHH
Q 007702 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLY 81 (592)
Q Consensus 2 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~ 81 (592)
+|+|+++++.++-++.++..+..+++...+....|+ +....-|..-+|.+.++...+.+-|+.|++|-|..++++..+.
T Consensus 41 ~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln 119 (480)
T KOG2563|consen 41 PRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLN 119 (480)
T ss_pred hhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHH
Confidence 478999999999999999999999998889999999 7778889999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhc------cHH--HHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHh
Q 007702 82 FVSGLVMLWSP------NVY--VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (592)
Q Consensus 82 ~i~~~~~~~s~------~~~--~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~ 153 (592)
.+++.+-..+. .++ ....+..+.+.+.-.....-+-..+-|+|+++|..+.++-.++..+|..+++++.-..
T Consensus 120 ~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppil 199 (480)
T KOG2563|consen 120 GIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPIL 199 (480)
T ss_pred HHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcccee
Confidence 99998887752 334 5667777777776666555556677899999999999987777777777764433221
Q ss_pred H----hcCCCchhH--HHHHHHHHHHHHHHHHHhhccCChhH---HHh-cCcHHHHHHHHHHHhCCCCchHHHHHHHHHH
Q 007702 154 S----LLASPSWRL--MLGVLSIPALLYFAFAVFFLPESPRW---LVS-KGKMLEAKQVLQRLRGREDVSGEMALLVEGL 223 (592)
Q Consensus 154 ~----~~~~~~Wr~--~f~i~~i~~~~~~~l~~~~~pEsP~~---l~~-~~~~~ea~~~l~~l~~~~~~~~~~~~i~~~l 223 (592)
. ..++..|-. +|+....+..+.+++..++.++.|+. ..+ +.+..+-.+.+++..+.. +-.+..+.-++
T Consensus 200 V~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~~~~f~~si~~~~~n~--~F~il~~~ygi 277 (480)
T KOG2563|consen 200 VPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQDASFPKSIKSCFKNR--QFIILAICYGI 277 (480)
T ss_pred cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhhcCcHHHHHHHHHcCc--cHHHHHHHHhh
Confidence 1 112345655 35544555444445555555554332 211 111112333444443332 23455556666
Q ss_pred hcccchhhhHhh
Q 007702 224 GIGGETSIEEYI 235 (592)
Q Consensus 224 ~~~~~~~~~~~~ 235 (592)
+.+..+++...+
T Consensus 278 ~~g~F~~l~~~l 289 (480)
T KOG2563|consen 278 GLGLFNSLSTLL 289 (480)
T ss_pred hHHHHHHHHHHh
Confidence 666666665544
No 180
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.59 E-value=2.2e-06 Score=92.04 Aligned_cols=123 Identities=12% Similarity=0.007 Sum_probs=96.2
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhh-hcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHh
Q 007702 28 AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISD-WLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGF 106 (592)
Q Consensus 28 ~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~D-r~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~ 106 (592)
..|.+.++.+.++...+++.+...++...+....+.+.| |++.++.++.+.++..++.++.+++++++.+++..++.|+
T Consensus 230 ~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~ 309 (400)
T PRK11646 230 MLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYI 309 (400)
T ss_pred hhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 455554554446677888877777766655555566655 5676777788888888888888888888888788888888
Q ss_pred hhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHH
Q 007702 107 GVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV 150 (592)
Q Consensus 107 ~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~ 150 (592)
+.+...|...+++.+.+|+++||+..++.++...+|..+++...
T Consensus 310 g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~ 353 (400)
T PRK11646 310 GSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGG 353 (400)
T ss_pred HHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccch
Confidence 88888888899999999999999999999999999988885443
No 181
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.59 E-value=9.2e-07 Score=91.98 Aligned_cols=127 Identities=26% Similarity=0.322 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHH-HHHcCCC-chHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhc---cHH
Q 007702 21 DNATIAGAIVYI-KKDLNLG-TTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP---NVY 95 (592)
Q Consensus 21 ~~~~~~~~~~~i-~~~~~~s-~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~---~~~ 95 (592)
.........|.+ .++++.+ ..+.+++.++..++..++.++.|+++||+|+|+.+.+......+..+...+.. +..
T Consensus 221 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (352)
T PF07690_consen 221 VFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPV 300 (352)
T ss_dssp HHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHH
T ss_pred HHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 333355556654 8889999 78899999999999999999999999999999888888888777777666543 457
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHH
Q 007702 96 VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAY 147 (592)
Q Consensus 96 ~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~ 147 (592)
..++.-++.|++.+...+....++.|.+|+++||+..++.+....+|..++|
T Consensus 301 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 301 WLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 7777888999999999999999999999999999999999999998888773
No 182
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.58 E-value=5.1e-06 Score=89.09 Aligned_cols=144 Identities=17% Similarity=0.137 Sum_probs=97.8
Q ss_pred HHHHHHHcCCCchHHHHHHHHH-HHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHH---Hhh-ccHHHHHHHHH-
Q 007702 29 IVYIKKDLNLGTTVEGLVVAMS-LIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM---LWS-PNVYVLCIARL- 102 (592)
Q Consensus 29 ~~~i~~~~~~s~~~~gli~s~~-~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~---~~s-~~~~~ll~~R~- 102 (592)
.+++.+++|++..+.+++.+.. .++.+++.++.|++.||+|||+.+.++.++.++..+.. ++. ++.+.+++.-+
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 312 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGI 312 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 3556778999999899988665 45688999999999999999999887777766554433 343 45555555443
Q ss_pred ---HHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHH
Q 007702 103 ---LDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAF 178 (592)
Q Consensus 103 ---l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l 178 (592)
..|++.+...+....++.+.+|.+.++. .+....+|..++. ..++.+.+..||+..|.+.++++++.+++
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~--~~~G~l~~~~G~~~~f~~~~~~~~~~~~~ 385 (402)
T PRK11902 313 ENLCGGMGTAAFVALLMALCNRSFSATQYAL----LSALASVGRVYVG--PTSGYLVEAYGWPGFYLMTVVIALPGLAL 385 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHH----HHHHHHHHHHHHH--HHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 4555566666777777777777666544 3333344544332 23455567789999998888777665433
No 183
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.58 E-value=1e-06 Score=96.97 Aligned_cols=171 Identities=14% Similarity=0.118 Sum_probs=139.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcC--chHHHHHHHHHHHHHHHHH
Q 007702 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLG--RRPMLILSSVLYFVSGLVM 88 (592)
Q Consensus 11 ~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~G--RK~~li~~~~l~~i~~~~~ 88 (592)
..++..+......+....+|.+.+..+.+..+.+.+.++..+..+++.++.|+++|+.. ++.+..++.++.+++.+.+
T Consensus 303 ~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~ 382 (509)
T KOG2504|consen 303 LALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFL 382 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHH
Confidence 33444444444455555778888899999999999999999999999999999999988 5666667777888888899
Q ss_pred HhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCC-chhHHHHH
Q 007702 89 LWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASP-SWRLMLGV 167 (592)
Q Consensus 89 ~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~-~Wr~~f~i 167 (592)
.++++++.+...-++.|++.|......+..+.|+.+.++-..+.++..++.+++.+++ +.+...+.+.. +|...|++
T Consensus 383 p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~g--pPiag~~~d~tg~Y~~~f~~ 460 (509)
T KOG2504|consen 383 PFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVG--PPIAGLLYDITGNYDHAFYF 460 (509)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcC--cccceeeeeccCCeeeehhh
Confidence 9999999999999999999999999999999999999999999999999999999888 44444555544 49999998
Q ss_pred HHHHHHHHHHHHHhhcc
Q 007702 168 LSIPALLYFAFAVFFLP 184 (592)
Q Consensus 168 ~~i~~~~~~~l~~~~~p 184 (592)
.++..++.. +.++..|
T Consensus 461 ~g~~~~~s~-~~~~~~~ 476 (509)
T KOG2504|consen 461 CGLCFLLSA-VLLLILR 476 (509)
T ss_pred cChHHHHHH-HHHHHhH
Confidence 888877654 3344444
No 184
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.57 E-value=1.4e-06 Score=91.49 Aligned_cols=122 Identities=18% Similarity=0.163 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhc-CchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHH
Q 007702 25 IAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL-GRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLL 103 (592)
Q Consensus 25 ~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~-GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l 103 (592)
+...+|.+.++.|.+....+.+.+...++.+++.++.|+++||+ +||+.+.++.++.+++.++..+.++...+. .-++
T Consensus 216 ~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l 294 (355)
T TIGR00896 216 LIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALV 294 (355)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHH
Confidence 33455666667899999999999999999999999999999999 577777788888888777777665433322 3567
Q ss_pred HHhhhhhhhhHHHHHHHhhcC-ccccchhhHHHHHHHhhHHHHHH
Q 007702 104 DGFGVGLAVTLVPLYISETAP-SEIRGRLNTLPQFTGSGGMFLAY 147 (592)
Q Consensus 104 ~G~~~g~~~~~~~~~i~E~~p-~~~Rg~~~~~~~~~~~~G~~l~~ 147 (592)
.|++.|...+.....+.+..+ ++.++...++.+....+|..+++
T Consensus 295 ~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp 339 (355)
T TIGR00896 295 LGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGP 339 (355)
T ss_pred HHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999888887777765554 56678888887777777766663
No 185
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.56 E-value=2.9e-06 Score=93.76 Aligned_cols=118 Identities=16% Similarity=0.072 Sum_probs=102.2
Q ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHh
Q 007702 30 VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW---SPNVYVLCIARLLDGF 106 (592)
Q Consensus 30 ~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~---s~~~~~ll~~R~l~G~ 106 (592)
.+++..+|.++.+.++....+.++..++.++.|++.||+|||+.+..+.++..++.++..+ .++.+...+..++.|+
T Consensus 284 ~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~ 363 (495)
T PRK14995 284 QELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGF 363 (495)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Confidence 3567778999999999999999999999999999999999999999888888777665543 2456666778899999
Q ss_pred hhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHH
Q 007702 107 GVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAY 147 (592)
Q Consensus 107 ~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~ 147 (592)
+.|...+.....+.+..|++++|...++.++...+|..++.
T Consensus 364 g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ 404 (495)
T PRK14995 364 SAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGI 404 (495)
T ss_pred hHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHH
Confidence 99999888888999999999999999999999888888773
No 186
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.55 E-value=5.8e-06 Score=85.66 Aligned_cols=152 Identities=10% Similarity=0.022 Sum_probs=106.9
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHH--HcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHH
Q 007702 13 IGNFLQG-WDNATIAGAIVYIKK--DLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML 89 (592)
Q Consensus 13 l~~~~~g-~~~~~~~~~~~~i~~--~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~ 89 (592)
++.|.+- ......+....++.+ .+|++..+.++..+.+..+.++|.++.+++.||+|+|+++.++.++..++.++..
T Consensus 147 ~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~ 226 (310)
T TIGR01272 147 LGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAA 226 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 3444433 333333334445543 3689999999999999999999999999999999999999988888888776666
Q ss_pred hhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHH
Q 007702 90 WSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLS 169 (592)
Q Consensus 90 ~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~ 169 (592)
..++...+ .+-++.|++.+..+|.......+..|++ .+...++. ....+|..+.+ ...+...+..+.+..|++..
T Consensus 227 ~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P--~l~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 227 LTHGYVAM-WFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVP--LLQGSLADCLGIQLAFALPV 301 (310)
T ss_pred HcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHH--HHHHHHHHhccchHHHHHHH
Confidence 55544333 3556889999999999999888888764 34555554 34456666663 33344445567777776433
No 187
>PRK09669 putative symporter YagG; Provisional
Probab=98.53 E-value=4.7e-06 Score=90.71 Aligned_cols=127 Identities=17% Similarity=0.195 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHh--hccHHHHHHHH
Q 007702 24 TIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW--SPNVYVLCIAR 101 (592)
Q Consensus 24 ~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~--s~~~~~ll~~R 101 (592)
..+...+++.+..--.....+.+.....+..+++.+++++++||+|+|+.+.++.++.++..+...+ .++.+.+++..
T Consensus 247 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (444)
T PRK09669 247 TRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALN 326 (444)
T ss_pred HHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHH
Confidence 3333444443332223344555666677888899999999999999999999888776654443333 34677778888
Q ss_pred HHHHhhhhhhhhHHHHHHHhhcCc-------cccchhhHHHHHHHhhHHHHHHHHH
Q 007702 102 LLDGFGVGLAVTLVPLYISETAPS-------EIRGRLNTLPQFTGSGGMFLAYCMV 150 (592)
Q Consensus 102 ~l~G~~~g~~~~~~~~~i~E~~p~-------~~Rg~~~~~~~~~~~~G~~l~~~~~ 150 (592)
++.|++.+...+...++++|..+. +..|...+...+...+|..+++.+.
T Consensus 327 ~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~ 382 (444)
T PRK09669 327 ILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVV 382 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999862 2335667777777777777764443
No 188
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.53 E-value=1.5e-06 Score=96.56 Aligned_cols=167 Identities=18% Similarity=0.063 Sum_probs=106.2
Q ss_pred HHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhcc------------
Q 007702 26 AGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPN------------ 93 (592)
Q Consensus 26 ~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~------------ 93 (592)
....+.+-+..+.+... .+...+..+...+++.++..+.||+|||+.++.+.+.+.++.++.+....
T Consensus 315 ~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~ 393 (513)
T KOG0254|consen 315 FYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGA 393 (513)
T ss_pred EeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccch
Confidence 33445566666666543 45555555666777778899999999999999999999998887775311
Q ss_pred -HHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHH
Q 007702 94 -VYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPA 172 (592)
Q Consensus 94 -~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~ 172 (592)
+..+...-+.......+..++.+.+.+|++|.+.|+++.++......+..++.. .. ........++...|.+.+..+
T Consensus 394 ~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~-~~-~~~~~~~~~~~~~f~~f~~~~ 471 (513)
T KOG0254|consen 394 GWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLIS-FF-FPFITEALGIGGTFGYFGGIC 471 (513)
T ss_pred hHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHH-HH-HHHHHHhccccchHHHHHHHH
Confidence 112222222222223333466668899999999999999987766555554331 11 111112222455666666666
Q ss_pred HHHHH-HHHhhccCChhHHHhcCcHHHHHH
Q 007702 173 LLYFA-FAVFFLPESPRWLVSKGKMLEAKQ 201 (592)
Q Consensus 173 ~~~~~-l~~~~~pEsP~~l~~~~~~~ea~~ 201 (592)
.+..+ +.++++||| |++..|..+
T Consensus 472 ~~~~~~fv~~~~pET------kg~sleei~ 495 (513)
T KOG0254|consen 472 LLSLIIFVFFFVPET------KGLTLEEIN 495 (513)
T ss_pred HHHHHHHheEEcccC------CCCcHHHHH
Confidence 65565 678899999 777766443
No 189
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.53 E-value=6.3e-06 Score=90.54 Aligned_cols=128 Identities=16% Similarity=0.139 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHh-----hccHHH
Q 007702 22 NATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW-----SPNVYV 96 (592)
Q Consensus 22 ~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~-----s~~~~~ 96 (592)
....+...+++.+...-+....+++.++..++.+++.+++++++||+|+|+.++++.++.+++.+...+ ..+.+.
T Consensus 247 ~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (473)
T PRK10429 247 SNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALL 326 (473)
T ss_pred HHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHH
Confidence 334444444544444334556677777777889999999999999999999999888877766655432 345667
Q ss_pred HHHHHHHHHhhhhhhhhHHHHHHHhhcCc-------cccchhhHHHHHHHhhHHHHHHHH
Q 007702 97 LCIARLLDGFGVGLAVTLVPLYISETAPS-------EIRGRLNTLPQFTGSGGMFLAYCM 149 (592)
Q Consensus 97 ll~~R~l~G~~~g~~~~~~~~~i~E~~p~-------~~Rg~~~~~~~~~~~~G~~l~~~~ 149 (592)
+++.-++.|++.+...+..+++++|..+. +..|...++..+..-+|..+++.+
T Consensus 327 ~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i 386 (473)
T PRK10429 327 IVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFF 386 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 77777889999999999999999999662 233557788777777777776443
No 190
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.51 E-value=2.1e-06 Score=91.14 Aligned_cols=166 Identities=14% Similarity=0.229 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCC---CchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhh
Q 007702 15 NFLQGWDNATIAGAIVYIKKDLNL---GTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS 91 (592)
Q Consensus 15 ~~~~g~~~~~~~~~~~~i~~~~~~---s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s 91 (592)
.+.+.+|+... .+++..|+- ++...|.+.++..+.-++.-.+++++.+|+|.|+.++++.+++.+=.+.++++
T Consensus 234 ~~Y~vfdqqf~----~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~ 309 (412)
T PF01306_consen 234 AIYDVFDQQFP----IYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFA 309 (412)
T ss_dssp HHHHHHHHHHH----HHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHH----HHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhh
Confidence 45555655422 233333332 33668888898888889999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHH-HHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHH
Q 007702 92 PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTL-PQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSI 170 (592)
Q Consensus 92 ~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~-~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i 170 (592)
++.+.+.+.+.+.|+..+.......-|+++.+|++..++.-.+ .++...+|..+. ....+...+..|.+..|++.+.
T Consensus 310 ~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~--s~~~G~lyd~~G~~~tylimg~ 387 (412)
T PF01306_consen 310 TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIIL--SPLAGYLYDRIGFQHTYLIMGL 387 (412)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHH--hhhHHhhHhhcCcHHHHHHHHH
Confidence 9999999999999999999999999999999999987665555 355566666654 4445566677799999999888
Q ss_pred HHHHHHHHHHhhccCC
Q 007702 171 PALLYFAFAVFFLPES 186 (592)
Q Consensus 171 ~~~~~~~l~~~~~pEs 186 (592)
+.++..++..+.++..
T Consensus 388 iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 388 IVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHHHHHHHHS--S
T ss_pred HHHHHHHHheeeecCC
Confidence 8887777777777654
No 191
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.50 E-value=3.9e-06 Score=91.82 Aligned_cols=148 Identities=17% Similarity=0.267 Sum_probs=111.4
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHH-HHHHHHHHHHHHHHhh-c-cHHHHHHHHHHHHhhhhhhhhHHHH
Q 007702 41 TVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLI-LSSVLYFVSGLVMLWS-P-NVYVLCIARLLDGFGVGLAVTLVPL 117 (592)
Q Consensus 41 ~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li-~~~~l~~i~~~~~~~s-~-~~~~ll~~R~l~G~~~g~~~~~~~~ 117 (592)
+..++..++..+-.++..|+.|.++|+-|+||.++ +..++.+++++++.+. + +++...+.-++.-++.+.......+
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888889999999999999999998666555 4555566677777664 3 4555555556666777777788889
Q ss_pred HHHhhcCcccc--------------------------chhhHHHHHHHhhHHHHHHHHHHHhHhcCC------CchhHHH
Q 007702 118 YISETAPSEIR--------------------------GRLNTLPQFTGSGGMFLAYCMVFGMSLLAS------PSWRLML 165 (592)
Q Consensus 118 ~i~E~~p~~~R--------------------------g~~~~~~~~~~~~G~~l~~~~~~~~~~~~~------~~Wr~~f 165 (592)
|+.|+++++.+ ++..+.-...+.+|.++..++.+....... .+-|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999999988 999998888888888777555555433222 2468888
Q ss_pred HHHHHHHHHHHHHHHhhccCChh
Q 007702 166 GVLSIPALLYFAFAVFFLPESPR 188 (592)
Q Consensus 166 ~i~~i~~~~~~~l~~~~~pEsP~ 188 (592)
.+.++.-++..+..++++||.|+
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCC
Confidence 88888888878888888998875
No 192
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.50 E-value=1.3e-05 Score=86.01 Aligned_cols=171 Identities=20% Similarity=0.262 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcC-CCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhh-
Q 007702 14 GNFLQGWDNATIAGAIVYIKKDLN-LGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS- 91 (592)
Q Consensus 14 ~~~~~g~~~~~~~~~~~~i~~~~~-~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s- 91 (592)
..++.+.....+....+..-++.+ .+....+.+.++..++=++.-.+.+++..|+|.|++++++.+.+++=..+.++.
T Consensus 215 ~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~ 294 (400)
T PF03825_consen 215 AAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFS 294 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 345556556666666666666766 666777777777777777888899999999999999999999999988888876
Q ss_pred ccHHHHH----HHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHH-HhhHHHHHHHHHHHhHhcCC------Cc
Q 007702 92 PNVYVLC----IARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFT-GSGGMFLAYCMVFGMSLLAS------PS 160 (592)
Q Consensus 92 ~~~~~ll----~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~-~~~G~~l~~~~~~~~~~~~~------~~ 160 (592)
++.+... +..++.|+..|........|+.+.+|++.|+++.+++... ..+|..++.... +.+.+. ..
T Consensus 295 ~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~ig--G~l~~~~g~~~~~~ 372 (400)
T PF03825_consen 295 DPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIG--GWLYDAFGARGMFD 372 (400)
T ss_pred CCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHH--HHHHHHhcchhhhh
Confidence 5544333 3356799999999999999999999999999999987754 567777774333 333332 24
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccCC
Q 007702 161 WRLMLGVLSIPALLYFAFAVFFLPES 186 (592)
Q Consensus 161 Wr~~f~i~~i~~~~~~~l~~~~~pEs 186 (592)
|...+.+.++..++..++.+++.+|+
T Consensus 373 ~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 373 WSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 56666666666666565555666654
No 193
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.48 E-value=1.8e-05 Score=83.73 Aligned_cols=116 Identities=13% Similarity=0.093 Sum_probs=83.1
Q ss_pred HHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHh----hccHHHHHHHHHHHHh
Q 007702 31 YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW----SPNVYVLCIARLLDGF 106 (592)
Q Consensus 31 ~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~----s~~~~~ll~~R~l~G~ 106 (592)
++.+.+|.+..+.+++.+...++.+++.++.|++.||+|||+.+.++.++..+..+.... ..+++.+.++-.+.+.
T Consensus 220 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (377)
T PRK11102 220 VYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVG 299 (377)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 456778999999999999999999999999999999999999999888765544333222 2244444444445555
Q ss_pred hhhhhhhHHHHHHHhhcCccccchhhHHHHHH-HhhHHHHHH
Q 007702 107 GVGLAVTLVPLYISETAPSEIRGRLNTLPQFT-GSGGMFLAY 147 (592)
Q Consensus 107 ~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~-~~~G~~l~~ 147 (592)
+.+...+....++.|..| +.||...++.+.. ..+|..++.
T Consensus 300 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~ 340 (377)
T PRK11102 300 CVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGA 340 (377)
T ss_pred HHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHH
Confidence 555555556667778776 7899988886654 345555553
No 194
>PRK11462 putative transporter; Provisional
Probab=98.48 E-value=6.6e-06 Score=90.07 Aligned_cols=169 Identities=12% Similarity=0.116 Sum_probs=121.1
Q ss_pred HHHHHHHHH-HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhh----cCchHHH-HHHHHHHHHHHHHHHhhc
Q 007702 19 GWDNATIAG-AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW----LGRRPML-ILSSVLYFVSGLVMLWSP 92 (592)
Q Consensus 19 g~~~~~~~~-~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr----~GRK~~l-i~~~~l~~i~~~~~~~s~ 92 (592)
+.....++. .+.++....|+++...|.+..+.-+--++.-|+.|.++|| +|||+.. +++.+.++++.+++...|
T Consensus 22 ~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p 101 (460)
T PRK11462 22 HIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTP 101 (460)
T ss_pred hHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCC
Confidence 333333443 4556788899999999999999999999999999999995 7986555 467678887776665554
Q ss_pred c------HHHHHHHHHHHHhhhhhhhhHHHHHHHhhcC-ccccchhhHHHHHHHhhHHHHHHHHHHHhH--hc---CCCc
Q 007702 93 N------VYVLCIARLLDGFGVGLAVTLVPLYISETAP-SEIRGRLNTLPQFTGSGGMFLAYCMVFGMS--LL---ASPS 160 (592)
Q Consensus 93 ~------~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p-~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~--~~---~~~~ 160 (592)
. +..+++.-++..++.........++.+|+++ +++|.++.++...+..+|..+++....... .. ...+
T Consensus 102 ~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g 181 (460)
T PRK11462 102 DLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLG 181 (460)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhh
Confidence 2 3445555556677777777777789999998 789999999999998888776644432221 11 1237
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccCCh
Q 007702 161 WRLMLGVLSIPALLYFAFAVFFLPESP 187 (592)
Q Consensus 161 Wr~~f~i~~i~~~~~~~l~~~~~pEsP 187 (592)
|+....+.+++.++..+++++..+|.+
T Consensus 182 ~~~~~~i~~ii~~i~~~i~~~~~kE~~ 208 (460)
T PRK11462 182 FQGGIAVLSVVAFMMLAFCFFTTKERV 208 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcceecc
Confidence 888887777777666656566667753
No 195
>PRK10133 L-fucose transporter; Provisional
Probab=98.46 E-value=1.2e-05 Score=87.39 Aligned_cols=139 Identities=6% Similarity=-0.134 Sum_probs=100.9
Q ss_pred HHH-HHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhh
Q 007702 30 VYI-KKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGV 108 (592)
Q Consensus 30 ~~i-~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~ 108 (592)
+++ ++.+|+++...++..+.+.++.++|.++.+++.||+|||+++..+.++..++.++..+.++.. .++.-++.|++.
T Consensus 283 ~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~ 361 (438)
T PRK10133 283 RYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFM 361 (438)
T ss_pred HHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHH
Confidence 453 456899999999999999999999999999999999999999998888777766666666543 245567899999
Q ss_pred hhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCc-hhHHHHHHHHHHH
Q 007702 109 GLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS-WRLMLGVLSIPAL 173 (592)
Q Consensus 109 g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~-Wr~~f~i~~i~~~ 173 (592)
+..+|.......+..|.+ -+...++..... +|..+++ .......+..+ -|..|++..+..+
T Consensus 362 ~~i~P~~~s~a~~~~~~~-~~~as~l~~~~~-~g~~~~~--~i~G~l~~~~g~~~~~~~v~~~~~~ 423 (438)
T PRK10133 362 SIQYPTIFSLGIKNLGQD-TKYGSSFIVMTI-IGGGIVT--PVMGFVSDAAGNIPTAELIPALCFA 423 (438)
T ss_pred HHHHHHHHHHHHcccchh-hccchhHHhHHh-ccchHHH--HHHHHHHHhccchHHHHHHHHHHHH
Confidence 999999999999988764 556666665443 3444432 22223334444 6777755444433
No 196
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.45 E-value=4.9e-06 Score=90.09 Aligned_cols=138 Identities=17% Similarity=0.192 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHh
Q 007702 12 TIGNFLQGWDNATIAGAIVYIKKD-LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW 90 (592)
Q Consensus 12 ~l~~~~~g~~~~~~~~~~~~i~~~-~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~ 90 (592)
.+..++........+...+++.++ ++.+ ...+.+..+..++..++.+++++++||+|+|+++..+.++.+++.++..+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~ 309 (428)
T PF13347_consen 231 LLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFF 309 (428)
T ss_pred HHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHH
Confidence 334444555555555556665544 5544 67788888999999999999999999999999999999999999998888
Q ss_pred hc--cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCc-------cccchhhHHHHHHHhhHHHHHHHHH
Q 007702 91 SP--NVYVLCIARLLDGFGVGLAVTLVPLYISETAPS-------EIRGRLNTLPQFTGSGGMFLAYCMV 150 (592)
Q Consensus 91 s~--~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~-------~~Rg~~~~~~~~~~~~G~~l~~~~~ 150 (592)
.+ +.+.+++.-++.|++.+...+...++++|+.+. +..|...++..+...+|..++..+.
T Consensus 310 ~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~ 378 (428)
T PF13347_consen 310 LGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIV 378 (428)
T ss_pred HHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHH
Confidence 76 999999999999999999999999999999873 3348888888888888887775543
No 197
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.45 E-value=1.3e-05 Score=85.37 Aligned_cols=114 Identities=14% Similarity=0.191 Sum_probs=79.4
Q ss_pred HHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhh
Q 007702 31 YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGL 110 (592)
Q Consensus 31 ~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~ 110 (592)
++.+++|.+..+.+.+.+...++.+++.++.+++.||+|||+.++++.++..++.++..+.++.+..++.-.+.+++.+.
T Consensus 229 ~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 308 (392)
T PRK10473 229 LLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSV 308 (392)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678899998899999999999999999999999999999999999998888888877766555444444444444444
Q ss_pred hhhHHHHHHHhhcCcccc-chhhHHHHHHHhhHHHHH
Q 007702 111 AVTLVPLYISETAPSEIR-GRLNTLPQFTGSGGMFLA 146 (592)
Q Consensus 111 ~~~~~~~~i~E~~p~~~R-g~~~~~~~~~~~~G~~l~ 146 (592)
..+. .+..+..|.++| |...++..+...+|..++
T Consensus 309 ~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~ 343 (392)
T PRK10473 309 GFGV--AMSQALGPFSLRAGVASSTLGIAQVCGSSLW 343 (392)
T ss_pred HhHH--HHHHHhccCcccccHHHHHHHHHHHHHHHHH
Confidence 3332 344556676555 334444443334444333
No 198
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.44 E-value=5.3e-06 Score=90.76 Aligned_cols=167 Identities=16% Similarity=0.194 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHH--------HHHHHHH
Q 007702 11 ATIGNFLQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPML--------ILSSVLY 81 (592)
Q Consensus 11 ~~l~~~~~g~~~~~~~~~~~-~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~l--------i~~~~l~ 81 (592)
..+..+...+....+...+| ++.+.+|.+..+.++..++..++..++.++.|+++||+++|+.. ..+..+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 345 (465)
T TIGR00894 266 IWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGL 345 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH
Confidence 33444444444444444444 46677899999999999999999999999999999998754321 1111111
Q ss_pred --HHHHHHHHh-hccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCC
Q 007702 82 --FVSGLVMLW-SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLAS 158 (592)
Q Consensus 82 --~i~~~~~~~-s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~ 158 (592)
.+..+.... ..+....++.-++.+.+.+...+.......|..|. .+|..+++.+....+|.++++.+. ....+.
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~--g~~~~~ 422 (465)
T TIGR00894 346 GPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLA--GNILSQ 422 (465)
T ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhh--heeeCC
Confidence 111111122 23444444444555555555555544555677765 899999999999998888885332 332222
Q ss_pred ---CchhHHHHHHHHHHHHHHHHHH
Q 007702 159 ---PSWRLMLGVLSIPALLYFAFAV 180 (592)
Q Consensus 159 ---~~Wr~~f~i~~i~~~~~~~l~~ 180 (592)
.+|+..|.+.++..++..++..
T Consensus 423 ~~~~~~~~~f~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 423 DSKNVWLIVFLIMAFVNILCVIFYL 447 (465)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHee
Confidence 3599999888877776554433
No 199
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.43 E-value=1.6e-05 Score=87.46 Aligned_cols=139 Identities=11% Similarity=0.046 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHHHHhhHHh----hhhh-cCchHHH--HHHHHHHHHHHHHHHh---------hccHHHHHHHHHHHHh
Q 007702 43 EGLVVAMSLIGATAITTCSGP----ISDW-LGRRPML--ILSSVLYFVSGLVMLW---------SPNVYVLCIARLLDGF 106 (592)
Q Consensus 43 ~gli~s~~~lg~~ig~~~~G~----l~Dr-~GRK~~l--i~~~~l~~i~~~~~~~---------s~~~~~ll~~R~l~G~ 106 (592)
.+++.+...+..++.+++..+ +.+| .+.+... .++.++.+++.+..++ ..+++++++..++.|+
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 667777777777777777554 4443 2333433 6788888887777664 4589999999999999
Q ss_pred hhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhc
Q 007702 107 GVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFL 183 (592)
Q Consensus 107 ~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~ 183 (592)
|.....|....++++.+|++.||+.+++......+|..++..+... .....+|...|...++..++..++.++..
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATF--GAVPQGVTGVFGKIGLVTLLVGVVMALMV 468 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhcccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988444332 22345788888777777666555544443
No 200
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.42 E-value=1.3e-05 Score=86.90 Aligned_cols=136 Identities=15% Similarity=0.078 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHh-h-----ccHHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 007702 47 VAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW-S-----PNVYVLCIARLLDGFGVGLAVTLVPLYIS 120 (592)
Q Consensus 47 ~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~-s-----~~~~~ll~~R~l~G~~~g~~~~~~~~~i~ 120 (592)
..+..+...+..+++|+++||+|+|++++++.++.+++.+.... . .+++.+++.-+...++.|.....+.-++.
T Consensus 292 ~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip 371 (462)
T PRK15034 292 AFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIA 371 (462)
T ss_pred HHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhH
Confidence 33455777888899999999999999999998877776643222 2 24555555554444444544455555666
Q ss_pred hhcCc---------------------cccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHH
Q 007702 121 ETAPS---------------------EIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFA 179 (592)
Q Consensus 121 E~~p~---------------------~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~ 179 (592)
..+|. ++-|...++......+|.++.+.. ++.......++...|++..+..+++.++.
T Consensus 372 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~-~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 450 (462)
T PRK15034 372 VIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQA-FGMSLNMTGSPVGAMKVFLIFYIVCVLLT 450 (462)
T ss_pred HHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHH-HHHHHHHcCCcHHHHHHHHHHHHHHHHHH
Confidence 66663 134566777777777766665422 22222223457777877777777766666
Q ss_pred Hhhc
Q 007702 180 VFFL 183 (592)
Q Consensus 180 ~~~~ 183 (592)
+++.
T Consensus 451 w~~y 454 (462)
T PRK15034 451 WLVY 454 (462)
T ss_pred HHHh
Confidence 6554
No 201
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.41 E-value=5.6e-06 Score=81.82 Aligned_cols=144 Identities=13% Similarity=0.146 Sum_probs=109.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHH
Q 007702 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (592)
Q Consensus 3 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~ 82 (592)
...+++..+|+.+....+.....++ ..+++.||+++...+.+.+....-.++.+++.|.++|++|++...+.+.++..
T Consensus 264 ppfw~~~iicv~yyva~fPFi~lg~--~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~t 341 (459)
T KOG4686|consen 264 PPFWVLVIICVLYYVAWFPFITLGP--MFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILT 341 (459)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhH--HHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHH
Confidence 3456667777777666665555544 34889999999999999998888889999999999999999999888877665
Q ss_pred HHH-HHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHH
Q 007702 83 VSG-LVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV 150 (592)
Q Consensus 83 i~~-~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~ 150 (592)
+.. ....|+ ++.=.++-.+.|+.........+..++-+.|.++-|++-++.|...++|..+.+++.
T Consensus 342 l~~H~~l~Ft--~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iia 408 (459)
T KOG4686|consen 342 LLGHSGLFFT--FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIA 408 (459)
T ss_pred HHHhhhHHhh--hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhh
Confidence 443 333332 222234556778877776666777888899999999999999999999988775443
No 202
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.41 E-value=7.4e-06 Score=85.67 Aligned_cols=145 Identities=19% Similarity=0.245 Sum_probs=106.2
Q ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhc-------cH----HHHH
Q 007702 30 VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP-------NV----YVLC 98 (592)
Q Consensus 30 ~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~-------~~----~~ll 98 (592)
-+++.+|+++....+.+.+.+.+...+.-+..|+++||+|.++++.+...+++++.++..+.+ +. ..++
T Consensus 243 ~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 322 (417)
T COG2223 243 MYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFL 322 (417)
T ss_pred HHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHH
Confidence 457889999999999999999999999999999999999999999999999888887777653 33 3344
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHH
Q 007702 99 IARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAF 178 (592)
Q Consensus 99 ~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l 178 (592)
...+..|+|.|..+-..|. ++|. +-|...++....+.+|.+.-+.. ++.......++...|++...+.++.+++
T Consensus 323 ~l~~~~G~GnGsvfk~Ip~----if~~-~~G~v~G~vga~G~lGGf~lp~~-~g~~~~~tg~~~~~f~~~~~~~~~a~v~ 396 (417)
T COG2223 323 ALFVFAGLGNGSVFKMIPV----IFPK-ETGAVTGIVGAIGGLGGFFLPLA-FGVSLDLTGSYTGAFMLLLAFYLVALVL 396 (417)
T ss_pred HHHHHhccCcchheeechH----HHHh-hhhHHHHHHHHhccccccchhHH-HHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 5566666666666554444 4444 56778888888888886554322 2323323336899998888877776654
Q ss_pred HH
Q 007702 179 AV 180 (592)
Q Consensus 179 ~~ 180 (592)
.+
T Consensus 397 ~~ 398 (417)
T COG2223 397 TW 398 (417)
T ss_pred HH
Confidence 43
No 203
>PRK11043 putative transporter; Provisional
Probab=98.41 E-value=4.4e-05 Score=81.62 Aligned_cols=118 Identities=19% Similarity=0.140 Sum_probs=89.3
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHH---Hh--hccHHHHHHHHH
Q 007702 28 AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM---LW--SPNVYVLCIARL 102 (592)
Q Consensus 28 ~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~---~~--s~~~~~ll~~R~ 102 (592)
..|.+.+++|.+..+.++......++..+|.++.+.+.||+|+|+.+....++.+++.+.. .+ .++++.+++.-.
T Consensus 225 ~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (401)
T PRK11043 225 GSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFC 304 (401)
T ss_pred HhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHH
Confidence 4556667789999889988888888999999999999999999998766655554443322 12 345666666677
Q ss_pred HHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHH
Q 007702 103 LDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLA 146 (592)
Q Consensus 103 l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 146 (592)
+.|++.+...+....+..+..| ++||+..++.+.....+...+
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~ 347 (401)
T PRK11043 305 VMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLA 347 (401)
T ss_pred HHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHH
Confidence 8888888888888888878776 579999999887665555555
No 204
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.35 E-value=3.3e-07 Score=96.21 Aligned_cols=181 Identities=15% Similarity=0.136 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHH--------HH-HHHHHHHHHHHhhHHhhhhhcCchHHHHH
Q 007702 6 LVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGL--------VV-AMSLIGATAITTCSGPISDWLGRRPMLIL 76 (592)
Q Consensus 6 ~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gl--------i~-s~~~lg~~ig~~~~G~l~Dr~GRK~~li~ 76 (592)
..++..+..+|+.-+.....+.....+-+..++.+..... .. -+...+.+.|..+...+.|++|||++.+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 5566777777777777766666777788877764421111 11 12223334466778888999999999999
Q ss_pred HHHHHHHHHHHHHhhcc--------HHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHH
Q 007702 77 SSVLYFVSGLVMLWSPN--------VYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYC 148 (592)
Q Consensus 77 ~~~l~~i~~~~~~~s~~--------~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 148 (592)
+.+++.+..+..+...+ .....+..++.-+|-+ +...++.+|.+|++.|+..-++..+.+-.|.+++..
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn---~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~ 460 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPN---ATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAF 460 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCC---ceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHH
Confidence 99999999999888766 1223333344444332 344567799999999999999999999999998843
Q ss_pred HHHHhHhcC-----CCchhHHHHHHHHHHHHHHHHHHhhccCChhHHHhcCcHHH
Q 007702 149 MVFGMSLLA-----SPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLE 198 (592)
Q Consensus 149 ~~~~~~~~~-----~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~l~~~~~~~e 198 (592)
.. ..... ..+.|..+++.+.+.++.. +..+++||| |+|..|
T Consensus 461 ~F--~~~t~~~yp~~~g~~~v~~i~~~~~~~gi-~~T~l~pEt------k~~~le 506 (538)
T KOG0252|consen 461 GF--LYLTDHNYPPNIGVRNVFIILAGCMLLGI-LFTLLIPET------KGKSLE 506 (538)
T ss_pred Hh--hHhhhccCCccccchHHHHHHHHHHHHhH-heeEEeecc------cccCHH
Confidence 33 33333 4578999998888887744 556778899 666554
No 205
>PRK09848 glucuronide transporter; Provisional
Probab=98.33 E-value=1.5e-05 Score=86.84 Aligned_cols=114 Identities=12% Similarity=0.199 Sum_probs=80.9
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhc----CchHHH-HHHHHHHHHHHHHHHhh-----cc--HH
Q 007702 28 AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL----GRRPML-ILSSVLYFVSGLVMLWS-----PN--VY 95 (592)
Q Consensus 28 ~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~----GRK~~l-i~~~~l~~i~~~~~~~s-----~~--~~ 95 (592)
..+++++.+|++..+.|++.++..+..++..++.|.++||. |||+.. +++.++..+..++.... ++ .+
T Consensus 31 l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (448)
T PRK09848 31 LLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVV 110 (448)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHH
Confidence 44678888999999999999999999999999999999996 777755 55655555444443221 11 23
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHhhcCc-cccchhhHHHHHHHhh
Q 007702 96 VLCIARLLDGFGVGLAVTLVPLYISETAPS-EIRGRLNTLPQFTGSG 141 (592)
Q Consensus 96 ~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~-~~Rg~~~~~~~~~~~~ 141 (592)
.+++.-++.+++.+...+...++..|..+. ++|....+.-+.+..+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~ 157 (448)
T PRK09848 111 YAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASL 157 (448)
T ss_pred HHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHH
Confidence 344455667777777776666777777654 6788887776654343
No 206
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.30 E-value=4.1e-05 Score=84.74 Aligned_cols=142 Identities=14% Similarity=0.070 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHHHhhH----HhhhhhcCchHHHHHHHHHHHHHHHHHHhhcc---------HHHHHHHHHHHHhhhh
Q 007702 43 EGLVVAMSLIGATAITTCS----GPISDWLGRRPMLILSSVLYFVSGLVMLWSPN---------VYVLCIARLLDGFGVG 109 (592)
Q Consensus 43 ~gli~s~~~lg~~ig~~~~----G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~---------~~~ll~~R~l~G~~~g 109 (592)
.+++.++..+..++..++. +++.+|++..+.+.++.++.+++.++.+++.+ .+++++..++.|++.+
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 4555666665555555555 66677777778888999999999888776644 5678889999999999
Q ss_pred hhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhH---hc-----CCCchhHHHHHHHHHHHHHHHHHHh
Q 007702 110 LAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMS---LL-----ASPSWRLMLGVLSIPALLYFAFAVF 181 (592)
Q Consensus 110 ~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~---~~-----~~~~Wr~~f~i~~i~~~~~~~l~~~ 181 (592)
...|....++.+.+|++.||+.++...+...+|..++....-... .. ...+....|...++..++..++.+.
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998888888777633321110 00 0113567777666665554444444
Q ss_pred hcc
Q 007702 182 FLP 184 (592)
Q Consensus 182 ~~p 184 (592)
..|
T Consensus 478 ~~~ 480 (500)
T PRK09584 478 TAP 480 (500)
T ss_pred HHH
Confidence 333
No 207
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.26 E-value=1.6e-07 Score=104.24 Aligned_cols=176 Identities=17% Similarity=0.204 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHH
Q 007702 9 IAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM 88 (592)
Q Consensus 9 ~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~ 88 (592)
+..++..+.++...+.+...++.+++.|++++++.|++.+.+-++.++..++..++..|..|-+.+-++.++++++++++
T Consensus 6 ~~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~ 85 (539)
T PF03137_consen 6 VFLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLF 85 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHH
Confidence 34455555567777777888899999999999999999999999999999999999999888888888999999998887
Q ss_pred Hh--------------------------h------------------------ccHHHHHHHHHHHHhhhhhhhhHHHHH
Q 007702 89 LW--------------------------S------------------------PNVYVLCIARLLDGFGVGLAVTLVPLY 118 (592)
Q Consensus 89 ~~--------------------------s------------------------~~~~~ll~~R~l~G~~~g~~~~~~~~~ 118 (592)
++ . .-+..++++.++.|+|....+++..+|
T Consensus 86 ~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tY 165 (539)
T PF03137_consen 86 ALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITY 165 (539)
T ss_dssp ------------------------------------------------------------------SSS-----------
T ss_pred hccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeee
Confidence 73 0 014778889999999999999999999
Q ss_pred HHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHh-------cC---------CC----chhHHHHHHHHHHHHHHHH
Q 007702 119 ISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL-------LA---------SP----SWRLMLGVLSIPALLYFAF 178 (592)
Q Consensus 119 i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~-------~~---------~~----~Wr~~f~i~~i~~~~~~~l 178 (592)
+-|..+++.-+...++......+|..+|+++...... .+ ++ .|..-|.+.+++.++..+.
T Consensus 166 iDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aip 245 (539)
T PF03137_consen 166 IDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIP 245 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998988888666533210 00 11 3777777777776665544
Q ss_pred HHhhccC
Q 007702 179 AVFFLPE 185 (592)
Q Consensus 179 ~~~~~pE 185 (592)
+++.|+
T Consensus 246 -l~~FPk 251 (539)
T PF03137_consen 246 -LFFFPK 251 (539)
T ss_dssp -------
T ss_pred -HHcCCc
Confidence 344443
No 208
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.24 E-value=1.3e-05 Score=84.26 Aligned_cols=113 Identities=16% Similarity=0.180 Sum_probs=85.8
Q ss_pred HHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHh--hc--cHHHHHHHHHHH
Q 007702 29 IVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW--SP--NVYVLCIARLLD 104 (592)
Q Consensus 29 ~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~--s~--~~~~ll~~R~l~ 104 (592)
..++++.++.+..+.+++.+...++.+++.++.|+++||+|||+.+..+.++..++.++..+ .+ +.+.+++.-++.
T Consensus 249 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (366)
T TIGR00886 249 AMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVAL 328 (366)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHH
Confidence 34566778999999999999999999999999999999999998888777766666555543 22 555555555556
Q ss_pred HhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhH
Q 007702 105 GFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGG 142 (592)
Q Consensus 105 G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G 142 (592)
++..|...+....+++|.+| +++|...++.+....+|
T Consensus 329 ~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 329 FFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 66666666667777888887 68999999877665554
No 209
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.18 E-value=1.4e-05 Score=65.24 Aligned_cols=81 Identities=12% Similarity=0.147 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHH
Q 007702 18 QGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVL 97 (592)
Q Consensus 18 ~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~l 97 (592)
.|+..+.+.|.+|.+.++.+++.++.+++.+...+|+.+|++....+.++..+++.+..+.++..+..+.+++.++++.+
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 57788899999999999999999999999999999999999999999999888999999999999999999999887655
Q ss_pred H
Q 007702 98 C 98 (592)
Q Consensus 98 l 98 (592)
.
T Consensus 84 ~ 84 (85)
T PF06779_consen 84 S 84 (85)
T ss_pred h
Confidence 3
No 210
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.15 E-value=2.2e-05 Score=85.36 Aligned_cols=166 Identities=20% Similarity=0.291 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCc-hHHHHHHHHH----HHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHH
Q 007702 14 GNFLQGWDNATIAGAIVYIKKDLNLGT-TVEGLVVAMS----LIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM 88 (592)
Q Consensus 14 ~~~~~g~~~~~~~~~~~~i~~~~~~s~-~~~gli~s~~----~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~ 88 (592)
-.|..+.......+..++....++.+. ...+...... .+..++.+++.|.++||+|||..+....+...+..++.
T Consensus 30 ~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~ 109 (463)
T KOG2816|consen 30 YMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCL 109 (463)
T ss_pred HHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHH
Confidence 333334434334444444455554433 2333333333 56777889999999999999999999999999988888
Q ss_pred HhhccHHHHHHHHHHHHhhh--hhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHH
Q 007702 89 LWSPNVYVLCIARLLDGFGV--GLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLG 166 (592)
Q Consensus 89 ~~s~~~~~ll~~R~l~G~~~--g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~ 166 (592)
.+.. +++++ +.++.. +.....+.+|+++....+.|....++.......+..++ +..+.......+.-.+|.
T Consensus 110 ~~~~--~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~--p~~~~~~~~~~~~a~~f~ 182 (463)
T KOG2816|consen 110 LFQG--YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIG--PALGGYLVKFLGIALVFL 182 (463)
T ss_pred HHHH--HHHhh---hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHH--HHHHHHHHHhcCchHHHH
Confidence 7776 33333 444433 33456677899999999999999999988777777777 444444445567888898
Q ss_pred HHHHHHHHHHHHHHhhccCC
Q 007702 167 VLSIPALLYFAFAVFFLPES 186 (592)
Q Consensus 167 i~~i~~~~~~~l~~~~~pEs 186 (592)
+..+..++..+..++++||+
T Consensus 183 ia~~~~~~~~~y~~~~l~Es 202 (463)
T KOG2816|consen 183 IAAASGILSLLYMLLFLPES 202 (463)
T ss_pred HHHHHHHHHHHHHhhccccc
Confidence 98888888888889999998
No 211
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.15 E-value=5e-05 Score=80.77 Aligned_cols=172 Identities=17% Similarity=0.183 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHH--HHHHHH
Q 007702 12 TIGNFLQGWDNATIAGAIVYIK-KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF--VSGLVM 88 (592)
Q Consensus 12 ~l~~~~~g~~~~~~~~~~~~i~-~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~--i~~~~~ 88 (592)
++..+.+.+.+++..+..+..- ++-|++.++.|.+.++..+..++.+++.|.++||+|.||-+++...+.. .+.+..
T Consensus 13 s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~ 92 (412)
T PF01306_consen 13 SLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFI 92 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 4445555556777777776655 4589999999999999999999999999999999997776654433322 232222
Q ss_pred -Hhhc----cH-HHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchh
Q 007702 89 -LWSP----NV-YVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (592)
Q Consensus 89 -~~s~----~~-~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr 162 (592)
.+.| |. ...+++-+..|++.....|+.-+|+....-. .+.--|-.-+++++|..++..+. +.+.+ .+-.
T Consensus 93 ~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr~--~~feYG~~R~wGSig~ai~s~~~--G~L~~-i~p~ 167 (412)
T PF01306_consen 93 YVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVSRR--NGFEYGRARMWGSIGFAIASLLA--GILFN-INPN 167 (412)
T ss_dssp HTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHHH--HSS-HHHHHHHHHHHHHHHHHHH--HHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHH--hcCCcchHHHHhhHHHHHHHHHh--heeee-eCcc
Confidence 2222 22 2233333334444444555555555444322 12222223345555555543222 22221 2446
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCChh
Q 007702 163 LMLGVLSIPALLYFAFAVFFLPESPR 188 (592)
Q Consensus 163 ~~f~i~~i~~~~~~~l~~~~~pEsP~ 188 (592)
..|++..+.+++..++.++..|+.|+
T Consensus 168 ~~fwi~s~~~~il~lll~~~~~~~~~ 193 (412)
T PF01306_consen 168 IIFWIASAAAIILLLLLLLLKPDVPP 193 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHSS---SSS
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcCch
Confidence 67777776666655555555555443
No 212
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.13 E-value=8.1e-05 Score=80.14 Aligned_cols=175 Identities=15% Similarity=0.223 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhh----cCchH-HHHHHHHHHHHHHHH
Q 007702 14 GNFLQGWDNATIAGAI-VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW----LGRRP-MLILSSVLYFVSGLV 87 (592)
Q Consensus 14 ~~~~~g~~~~~~~~~~-~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr----~GRK~-~li~~~~l~~i~~~~ 87 (592)
+.+............+ -++...+|+++...|.+..+.-+--++.-|+.|.+.|| +||+| .++++.+..++.+.+
T Consensus 20 gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l 99 (467)
T COG2211 20 GDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVL 99 (467)
T ss_pred hhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHH
Confidence 3444444444444433 45778899999999999999999999999999999995 78554 556677888888888
Q ss_pred HHhhcc------HHHHHHHHHHHHhhhhhhhhHHHHHHHhhcC-ccccchhhHHHHHHHhhHHHHHHHHHHHh-H-hcC-
Q 007702 88 MLWSPN------VYVLCIARLLDGFGVGLAVTLVPLYISETAP-SEIRGRLNTLPQFTGSGGMFLAYCMVFGM-S-LLA- 157 (592)
Q Consensus 88 ~~~s~~------~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p-~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~-~-~~~- 157 (592)
+..+++ ....++.-.+.+++.........++.+|+.+ +++|.++.+.-+.+..+|.++........ . ...
T Consensus 100 ~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~ 179 (467)
T COG2211 100 LFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGG 179 (467)
T ss_pred HHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 888763 4455566677777777776667788889887 68899999999999999976664433222 2 222
Q ss_pred --CCchhHHHHHHHHHHHHHHHHHHhhccCChh
Q 007702 158 --SPSWRLMLGVLSIPALLYFAFAVFFLPESPR 188 (592)
Q Consensus 158 --~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~ 188 (592)
..+|+..-++.+++.++.++++++-..|.+.
T Consensus 180 ~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~ 212 (467)
T COG2211 180 DKALGYQGTALVLGVIGVILLLFCFFNVKERVV 212 (467)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence 3489999999999988888888888888654
No 213
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.12 E-value=1.6e-07 Score=92.41 Aligned_cols=144 Identities=14% Similarity=0.059 Sum_probs=119.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhh-cCchHHHHHHHHHH
Q 007702 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW-LGRRPMLILSSVLY 81 (592)
Q Consensus 3 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr-~GRK~~li~~~~l~ 81 (592)
++...++..|+-.|...+.....+....+++++.+++.++..++-++|..-..+-+++.|++.|| +|-|..-++-++..
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv 120 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFV 120 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHH
Confidence 45666777777777777777777777788899999999899999999999999999999999997 68888777777777
Q ss_pred HHHHHHHHh---hccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHH
Q 007702 82 FVSGLVMLW---SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLA 146 (592)
Q Consensus 82 ~i~~~~~~~---s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 146 (592)
.++.++++. ++.+|+++++|++.|+|.-....+-..|+.-++..|+-+..+++......+|..+-
T Consensus 121 ~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvN 188 (459)
T KOG4686|consen 121 FLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVN 188 (459)
T ss_pred HHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceee
Confidence 788777764 68999999999999998877777778899999999999998888776666776543
No 214
>PRK11462 putative transporter; Provisional
Probab=98.11 E-value=0.0005 Score=75.30 Aligned_cols=124 Identities=17% Similarity=0.178 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhc--cHHHHHHHH
Q 007702 24 TIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP--NVYVLCIAR 101 (592)
Q Consensus 24 ~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~--~~~~ll~~R 101 (592)
..+....++.+...-.....+.+...+.++.+++.+++++++||+|+|+++..+.++.++..++..+.+ +...+++.-
T Consensus 246 ~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (460)
T PRK11462 246 VRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFI 325 (460)
T ss_pred HHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHH
Confidence 333344444444332334456677788889999999999999999999988766555544444443332 233344555
Q ss_pred HHHHhhhhhhhhHHHHHHHhhcCc-----ccc--chhhHHHHHHHhhHHHHHH
Q 007702 102 LLDGFGVGLAVTLVPLYISETAPS-----EIR--GRLNTLPQFTGSGGMFLAY 147 (592)
Q Consensus 102 ~l~G~~~g~~~~~~~~~i~E~~p~-----~~R--g~~~~~~~~~~~~G~~l~~ 147 (592)
++.|++.+...+....+++|...- ..| |...+...+..-+|..++.
T Consensus 326 ~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~ 378 (460)
T PRK11462 326 FVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGG 378 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 667887777777667777777662 233 4444554455555555553
No 215
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.08 E-value=0.00043 Score=73.79 Aligned_cols=118 Identities=18% Similarity=0.123 Sum_probs=87.0
Q ss_pred HHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHH-HHHHHHHh--hccHHHHHHHHHHHHhh
Q 007702 31 YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF-VSGLVMLW--SPNVYVLCIARLLDGFG 107 (592)
Q Consensus 31 ~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~-i~~~~~~~--s~~~~~ll~~R~l~G~~ 107 (592)
++.+.+|.+..+.+++.....++..++.++.+++.||++++........+.. +..+...+ ..+.+.+.+..++.|++
T Consensus 233 ~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 312 (394)
T PRK11652 233 LMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFG 312 (394)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence 4555689999889999888899999999999999999984333322222222 21111122 23566777788999999
Q ss_pred hhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHH
Q 007702 108 VGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCM 149 (592)
Q Consensus 108 ~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~ 149 (592)
.+...+....+..|.+| +.+|...++.+....+|..++..+
T Consensus 313 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~ 353 (394)
T PRK11652 313 AGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALL 353 (394)
T ss_pred HHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987 578999999888888888887433
No 216
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.07 E-value=0.00023 Score=76.63 Aligned_cols=134 Identities=20% Similarity=0.216 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhc
Q 007702 14 GNFLQGWDNATIAGAIVYIK-KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP 92 (592)
Q Consensus 14 ~~~~~g~~~~~~~~~~~~i~-~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~ 92 (592)
..++........+....++. -..+.+.....+.......+.+++.++...+++|+|+|+++.++.++.+++.++..+.+
T Consensus 244 ~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~ 323 (467)
T COG2211 244 MNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP 323 (467)
T ss_pred HHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc
Confidence 33444444444444444432 23444556666777777788888899999999999999999999999999999998875
Q ss_pred --cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCc-----ccc--chhhHHHHHHHhhHHHHHH
Q 007702 93 --NVYVLCIARLLDGFGVGLAVTLVPLYISETAPS-----EIR--GRLNTLPQFTGSGGMFLAY 147 (592)
Q Consensus 93 --~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~-----~~R--g~~~~~~~~~~~~G~~l~~ 147 (592)
+.+.+++..++.+++.+...+..+++++|+..- ..| |...+...++.=+|..++.
T Consensus 324 ~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~ 387 (467)
T COG2211 324 AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAG 387 (467)
T ss_pred CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHH
Confidence 788889999999999999999999998877542 223 6666776666667766654
No 217
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.07 E-value=0.0002 Score=78.32 Aligned_cols=143 Identities=8% Similarity=-0.038 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHHHHhhHHhhhhhcCc-hHHHHHHHHHHHHHHHHHHhhcc---------------------HHHHHHHHH
Q 007702 45 LVVAMSLIGATAITTCSGPISDWLGR-RPMLILSSVLYFVSGLVMLWSPN---------------------VYVLCIARL 102 (592)
Q Consensus 45 li~s~~~lg~~ig~~~~G~l~Dr~GR-K~~li~~~~l~~i~~~~~~~s~~---------------------~~~ll~~R~ 102 (592)
+....+.+...+.+++..++.+++|+ |++..++.++.+++.+...+.++ .+..++.-.
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFA 388 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHH
Confidence 44445555555777788899999995 77778888888877776665432 366777888
Q ss_pred HHHhhhhhhhhHHHHHHHhhcCcc--ccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHH
Q 007702 103 LDGFGVGLAVTLVPLYISETAPSE--IRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAV 180 (592)
Q Consensus 103 l~G~~~g~~~~~~~~~i~E~~p~~--~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~ 180 (592)
+.|+..+....+-++++++..|++ ..|..+++.+.+..+.+++..+...........+-..++.+.++..++..++.+
T Consensus 389 ~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~ 468 (477)
T TIGR01301 389 ILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLAL 468 (477)
T ss_pred HhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999964 449999999999999998876433221111122446677788888888888888
Q ss_pred hhccCCh
Q 007702 181 FFLPESP 187 (592)
Q Consensus 181 ~~~pEsP 187 (592)
+.+|.+|
T Consensus 469 ~~~~~~~ 475 (477)
T TIGR01301 469 ILLPRPR 475 (477)
T ss_pred HhCCCCC
Confidence 9999864
No 218
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.06 E-value=0.00038 Score=71.74 Aligned_cols=157 Identities=22% Similarity=0.256 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhc-CchHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Q 007702 22 NATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL-GRRPMLILSSVLYFVSGLVMLWSPNVYVLCIA 100 (592)
Q Consensus 22 ~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~-GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~ 100 (592)
.+.+-..+|.+..|-|++..+.|+..+...+.....++....+++|. .+|+..+..++++.++.+.+.+.|.-..++-
T Consensus 224 ~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw- 302 (395)
T COG2807 224 YYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW- 302 (395)
T ss_pred HHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-
Confidence 34445577889999999999999999999999999999999999964 7888888888888888888878765433333
Q ss_pred HHHHHhhhhhhhhHHHHHHHhhcCcc-ccchhhHHHHHHHhhHHHHHHHHH-HHhHh-cCCCchhHHHHHHHHHHHHHHH
Q 007702 101 RLLDGFGVGLAVTLVPLYISETAPSE-IRGRLNTLPQFTGSGGMFLAYCMV-FGMSL-LASPSWRLMLGVLSIPALLYFA 177 (592)
Q Consensus 101 R~l~G~~~g~~~~~~~~~i~E~~p~~-~Rg~~~~~~~~~~~~G~~l~~~~~-~~~~~-~~~~~Wr~~f~i~~i~~~~~~~ 177 (592)
-++.|++.|..++.+..++..-++.. +-+...++.| .+|..++.+-. +.+.+ ....+|+.+........++..+
T Consensus 303 ~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQ---g~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i 379 (395)
T COG2807 303 ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQ---GVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLI 379 (395)
T ss_pred HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhh---hhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHH
Confidence 48999999999999999998887754 4466666655 44554443222 22333 3345899999887777776555
Q ss_pred HHHhh
Q 007702 178 FAVFF 182 (592)
Q Consensus 178 l~~~~ 182 (592)
..+..
T Consensus 380 ~Gl~a 384 (395)
T COG2807 380 FGLRA 384 (395)
T ss_pred HHhhc
Confidence 54443
No 219
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.05 E-value=0.00031 Score=64.82 Aligned_cols=108 Identities=22% Similarity=0.206 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhc
Q 007702 44 GLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETA 123 (592)
Q Consensus 44 gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~ 123 (592)
..-.++......+.+++.+.+.+++|.|+.++++.+.+.+-.+.. +-++.+.++.+-.+.|++.+..++....|+.+..
T Consensus 40 ~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s 118 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYS 118 (156)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcC
Confidence 334455666677888889999999999999999999988665543 5677888999999999999999999999999999
Q ss_pred CccccchhhHHHHHHHhhHHHHHHHHHHH
Q 007702 124 PSEIRGRLNTLPQFTGSGGMFLAYCMVFG 152 (592)
Q Consensus 124 p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~ 152 (592)
.++.|++..++.-.....+.++|.+..+.
T Consensus 119 ~~~~~~~~~~ifw~i~~~s~i~G~~~~~~ 147 (156)
T PF05978_consen 119 TEETIGRNTGIFWAIFQSSLIFGNLFLFF 147 (156)
T ss_pred CHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998887666666666666444433
No 220
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.04 E-value=4.6e-05 Score=83.65 Aligned_cols=116 Identities=13% Similarity=0.083 Sum_probs=99.0
Q ss_pred HHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhh----------ccHHHHHHHHHH
Q 007702 34 KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS----------PNVYVLCIARLL 103 (592)
Q Consensus 34 ~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s----------~~~~~ll~~R~l 103 (592)
..+|.++...|++.+...++.+++..+.+.+.+|++.|+++.++.++.+++.+...+. ++.+.++..-++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 4678899999999999999999999999999999999999999999998887554311 333455566788
Q ss_pred HHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHH
Q 007702 104 DGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCM 149 (592)
Q Consensus 104 ~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~ 149 (592)
.+++.+........++++.+|++.+|...++.+...++|..++...
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~ 406 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFL 406 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999889998888543
No 221
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.03 E-value=0.00014 Score=82.63 Aligned_cols=155 Identities=14% Similarity=0.150 Sum_probs=117.1
Q ss_pred HHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhh-cCchHHHHHHHHHHHHHHHHHHhhcc--------HHH
Q 007702 26 AGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW-LGRRPMLILSSVLYFVSGLVMLWSPN--------VYV 96 (592)
Q Consensus 26 ~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr-~GRK~~li~~~~l~~i~~~~~~~s~~--------~~~ 96 (592)
.....++.+.++++.+....+...+....-+.++++|.++|+ +||+++++++.+++.++.++.+++.. ...
T Consensus 8 aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~ 87 (654)
T TIGR00926 8 TILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLL 87 (654)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHH
Confidence 345566778899998888888888888888889999999997 69999999999999999888776421 234
Q ss_pred HHHHHHHHHhhhhhhhhHHHHHHHhhcCccc---cchhhHHHHHHHhhHHHHHHHHHHHhH-h----cCCCchhHHHHHH
Q 007702 97 LCIARLLDGFGVGLAVTLVPLYISETAPSEI---RGRLNTLPQFTGSGGMFLAYCMVFGMS-L----LASPSWRLMLGVL 168 (592)
Q Consensus 97 ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~---Rg~~~~~~~~~~~~G~~l~~~~~~~~~-~----~~~~~Wr~~f~i~ 168 (592)
.+++-.+..+|.|+.-+...+...|.+++++ |-....++..++++|.+++..+.-... . ....+|...|.+.
T Consensus 88 ~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~ 167 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVP 167 (654)
T ss_pred HHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHH
Confidence 6677788888999999999999999998654 445666677778888877744432221 1 1245799999988
Q ss_pred HHHHHHHHHHHH
Q 007702 169 SIPALLYFAFAV 180 (592)
Q Consensus 169 ~i~~~~~~~l~~ 180 (592)
++..++.+++.+
T Consensus 168 ~i~m~ia~lvf~ 179 (654)
T TIGR00926 168 AILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHHH
Confidence 888777655443
No 222
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.99 E-value=0.00027 Score=78.05 Aligned_cols=139 Identities=13% Similarity=0.135 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHHHHhhHHhhhhhcCchHH-------HHHHHHHHHHHHHHHH-----hh-----ccHHHHHHHHHHHH
Q 007702 43 EGLVVAMSLIGATAITTCSGPISDWLGRRPM-------LILSSVLYFVSGLVML-----WS-----PNVYVLCIARLLDG 105 (592)
Q Consensus 43 ~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~-------li~~~~l~~i~~~~~~-----~s-----~~~~~ll~~R~l~G 105 (592)
.+++.+...+..++.+++.+.+.||+|+|+. +.++.++.+++.+..+ ++ .++++++..-++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 3556666667787888889999999999973 6677777666654321 21 35677888899999
Q ss_pred hhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcC--------CCchhHHHHHHHHHHHHHHH
Q 007702 106 FGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA--------SPSWRLMLGVLSIPALLYFA 177 (592)
Q Consensus 106 ~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~--------~~~Wr~~f~i~~i~~~~~~~ 177 (592)
+|.+...+....++.+.+|++.+|.++++.++...+|..++..+.-...... .....+.|...++..++..+
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v 470 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAV 470 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999888888888743332111100 11345666666665555444
Q ss_pred HHHh
Q 007702 178 FAVF 181 (592)
Q Consensus 178 l~~~ 181 (592)
+.++
T Consensus 471 ~~~~ 474 (489)
T PRK10207 471 VMAL 474 (489)
T ss_pred HHHH
Confidence 4333
No 223
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.97 E-value=0.00048 Score=74.24 Aligned_cols=107 Identities=7% Similarity=-0.097 Sum_probs=81.1
Q ss_pred CCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHH
Q 007702 37 NLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVP 116 (592)
Q Consensus 37 ~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~ 116 (592)
+.+....+...+.+..+..+|.++++++.||+++|+++.++.++.++..++..+.++... ++.-++.|++.+..+|...
T Consensus 265 ~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~ 343 (410)
T TIGR00885 265 GMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIY 343 (410)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHH
Confidence 444455566777777888999999999999999999999999999998888888777544 4566778888888889999
Q ss_pred HHHHhhcCccccchhhHHHHHHHhhHHHHH
Q 007702 117 LYISETAPSEIRGRLNTLPQFTGSGGMFLA 146 (592)
Q Consensus 117 ~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 146 (592)
....+..+++.+.....+ ..+. +|..+.
T Consensus 344 sl~~~~~g~~~~~~s~~l-~~~~-~Gga~~ 371 (410)
T TIGR00885 344 GIALKGLGQDTKYGAAGL-VMAI-IGGGIV 371 (410)
T ss_pred HHHHhhhhhhhhhhHHHH-HHHH-hccchH
Confidence 999999987765333333 2333 555555
No 224
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.95 E-value=0.00042 Score=77.05 Aligned_cols=132 Identities=27% Similarity=0.308 Sum_probs=98.6
Q ss_pred HHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHH---HHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccc
Q 007702 53 GATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVY---VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRG 129 (592)
Q Consensus 53 g~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~---~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg 129 (592)
.........+.+.|++|||..+..+.++..++.++.++.+... ...+...+..++.+..+.+.+.+.+|..|+..|.
T Consensus 362 ~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~ 441 (521)
T KOG0255|consen 362 VELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRN 441 (521)
T ss_pred HHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 3444555567899999999999999999999999999876543 3566667777777778888899999999999999
Q ss_pred hhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhccCCh
Q 007702 130 RLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESP 187 (592)
Q Consensus 130 ~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP 187 (592)
.+.+.......+|.++++.+.+.... ....+.... .+....+..++..+++||+.
T Consensus 442 ~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~--~~~~~~l~~~~~~~~lpet~ 496 (521)
T KOG0255|consen 442 TAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLIL--FGWLALLLGLLSLLLLPETK 496 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHH--HHHHHHHHHHHHHhcCcccC
Confidence 99999999999999998766644322 222222222 34444454556668999983
No 225
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.95 E-value=0.00029 Score=74.05 Aligned_cols=171 Identities=15% Similarity=0.202 Sum_probs=116.2
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHH-HHHHHHHHHHHHHHhhcc--H-HHHHHHHHHHHhhhhhhhhHHH
Q 007702 41 TVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLI-LSSVLYFVSGLVMLWSPN--V-YVLCIARLLDGFGVGLAVTLVP 116 (592)
Q Consensus 41 ~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li-~~~~l~~i~~~~~~~s~~--~-~~ll~~R~l~G~~~g~~~~~~~ 116 (592)
+..+...++..+-.++-+++.|-++|+.|+||..+ ....+.+++.++..++++ + +..++.-.+..++........-
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 56788888888888899999999999999666555 445556666677777654 4 4444556677777777777788
Q ss_pred HHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHh-c---------------CCCchhHHHHHHHHHHHHHHHHHH
Q 007702 117 LYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL-L---------------ASPSWRLMLGVLSIPALLYFAFAV 180 (592)
Q Consensus 117 ~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~-~---------------~~~~Wr~~f~i~~i~~~~~~~l~~ 180 (592)
+++.++.+++.-++..++-....-+|..+..+.++.... . +...-|..+.+.++..++..+..+
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~ 217 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMI 217 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHH
Confidence 999999999888888777666666676665444433321 1 334578888888888877777777
Q ss_pred hhccCChhH-----HHhcCcHHHHHHHHHHHhCCCC
Q 007702 181 FFLPESPRW-----LVSKGKMLEAKQVLQRLRGRED 211 (592)
Q Consensus 181 ~~~pEsP~~-----l~~~~~~~ea~~~l~~l~~~~~ 211 (592)
+..|+.|+- -.-++..+|-++.++.++++++
T Consensus 218 ~~v~~~~~~~~~~~~~l~~g~k~L~~t~k~i~~~~~ 253 (438)
T COG2270 218 LNVHDAEKISSPPPTALRNGFKELKSTFKEIRGRKN 253 (438)
T ss_pred hcccccccccccchHHHHHHHHHHHHHHHHHhcccc
Confidence 777766531 0112334445555566555553
No 226
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.94 E-value=0.00015 Score=78.73 Aligned_cols=157 Identities=23% Similarity=0.263 Sum_probs=118.2
Q ss_pred HHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcC-----chHHHHHHHHHHHHHHHHHHhh----ccHHH
Q 007702 26 AGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLG-----RRPMLILSSVLYFVSGLVMLWS----PNVYV 96 (592)
Q Consensus 26 ~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~G-----RK~~li~~~~l~~i~~~~~~~s----~~~~~ 96 (592)
....+++++++++++.+...+.+...+...+ .++.|.++|-+- ||+-++++.++..++.+..+.. .+...
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 3466789999999999888888887776655 677899999863 6666667777776666655553 34666
Q ss_pred HHHHHHHHHhhhhhhhhHHHHHHHhhcC--ccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHH
Q 007702 97 LCIARLLDGFGVGLAVTLVPLYISETAP--SEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALL 174 (592)
Q Consensus 97 ll~~R~l~G~~~g~~~~~~~~~i~E~~p--~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~ 174 (592)
..+.-++..++......++-++..|... ++.||...+.......+|.+++.. +.+...+..+++..|.+.+++..+
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~--l~G~l~~~~~~~~~f~i~~~~~~l 166 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSL--LSGPLLDSFGPQGVFLISAALPLL 166 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHH--hhhhhhhcCCCeEEehHHHHHHHH
Confidence 6677788888888888888899999984 334788888888888889888843 344556667888899888888777
Q ss_pred HHHHHHhhccC
Q 007702 175 YFAFAVFFLPE 185 (592)
Q Consensus 175 ~~~l~~~~~pE 185 (592)
..+..++..+|
T Consensus 167 ~~~~~~~~~~e 177 (433)
T PF03092_consen 167 MLIVALFLLEE 177 (433)
T ss_pred HHHHHHHhhhh
Confidence 66666677666
No 227
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.92 E-value=5.7e-05 Score=81.13 Aligned_cols=158 Identities=19% Similarity=0.167 Sum_probs=123.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHH
Q 007702 19 GWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLC 98 (592)
Q Consensus 19 g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll 98 (592)
|...+.+...+=--.++.+-.+...|........|-++.-++++.+..++|+-+++.+++....+=.+...+..|.|+.+
T Consensus 384 G~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vL 463 (618)
T KOG3762|consen 384 GAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVL 463 (618)
T ss_pred HHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchhee
Confidence 33333333333334567776677788777777888888899999999999999999999998888888888889999999
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHH-HhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHH
Q 007702 99 IARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFT-GSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFA 177 (592)
Q Consensus 99 ~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~-~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~ 177 (592)
-.-+++|+..+..+.++..|++..+||+.|..+.++.+.. ..+|-.+|. ..++......+=|..|.+.++.+++.++
T Consensus 464 Pieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gs--lIGG~~v~~fg~~ttf~~~giAcl~~l~ 541 (618)
T KOG3762|consen 464 PIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGS--LIGGFVVERFGARTTFRIFGIACLVTLA 541 (618)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhh--hhhhhhheeehhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999987753 445555553 3344555667778888877777666544
Q ss_pred H
Q 007702 178 F 178 (592)
Q Consensus 178 l 178 (592)
+
T Consensus 542 ~ 542 (618)
T KOG3762|consen 542 L 542 (618)
T ss_pred H
Confidence 3
No 228
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.89 E-value=1.6e-05 Score=82.29 Aligned_cols=97 Identities=15% Similarity=0.015 Sum_probs=76.4
Q ss_pred hhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcC------------
Q 007702 90 WSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA------------ 157 (592)
Q Consensus 90 ~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~------------ 157 (592)
...+++.++++-++.|.|.+...+.+..|++++.|++.+.+.+++.+.+..+|.++++.+........
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 45789999999999999999999999999999999999999999999999999999977765544221
Q ss_pred --CCchhHHHHHHHHHHHHHHHHH-HhhccCC
Q 007702 158 --SPSWRLMLGVLSIPALLYFAFA-VFFLPES 186 (592)
Q Consensus 158 --~~~Wr~~f~i~~i~~~~~~~l~-~~~~pEs 186 (592)
...|+++|++.+++.++..++. +.-+||.
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~ 117 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAFLPLPEL 117 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Confidence 1479999986666544434332 2334654
No 229
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.80 E-value=6.8e-05 Score=84.26 Aligned_cols=180 Identities=17% Similarity=0.210 Sum_probs=147.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHH
Q 007702 6 LVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG 85 (592)
Q Consensus 6 ~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~ 85 (592)
..++++++..+.++...+.+...+..+.+.|++++++.|++.+.+-+|..+...+..+..-|.-|-+.+-++.+++++++
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 34566777788888888888888999999999999999999999999999999999999999888888889999999999
Q ss_pred HHHHhh--------------------c--------------------------------cHHHHHHHHHHHHhhhhhhhh
Q 007702 86 LVMLWS--------------------P--------------------------------NVYVLCIARLLDGFGVGLAVT 113 (592)
Q Consensus 86 ~~~~~s--------------------~--------------------------------~~~~ll~~R~l~G~~~g~~~~ 113 (592)
+++++- + -+.+++++.++.|+|....++
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 988740 0 023677889999999999999
Q ss_pred HHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhH--hcCC-----------C----chhHHHHHHHHHHHHHH
Q 007702 114 LVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMS--LLAS-----------P----SWRLMLGVLSIPALLYF 176 (592)
Q Consensus 114 ~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~--~~~~-----------~----~Wr~~f~i~~i~~~~~~ 176 (592)
+...|+-|....+.-....++......+|-++|++++-... ..+. + .|..-|++.+.+.++..
T Consensus 257 lGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a 336 (735)
T KOG3626|consen 257 LGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA 336 (735)
T ss_pred CCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988876664432 1111 1 37778888888877766
Q ss_pred HHHHhhccCC
Q 007702 177 AFAVFFLPES 186 (592)
Q Consensus 177 ~l~~~~~pEs 186 (592)
+. +|++|..
T Consensus 337 ~p-~f~fPk~ 345 (735)
T KOG3626|consen 337 VP-LFFFPKE 345 (735)
T ss_pred HH-HHhCccc
Confidence 55 4555543
No 230
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.76 E-value=9.1e-05 Score=76.95 Aligned_cols=158 Identities=16% Similarity=0.158 Sum_probs=119.6
Q ss_pred HHHHHHHHHH-HHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcC--chHHHHHHHHHHHHHHHHHHhhccHHHHH
Q 007702 22 NATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLG--RRPMLILSSVLYFVSGLVMLWSPNVYVLC 98 (592)
Q Consensus 22 ~~~~~~~~~~-i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~G--RK~~li~~~~l~~i~~~~~~~s~~~~~ll 98 (592)
.+..-|.++. +.+.+..+..+.|+..--..+.+.+++.+.|.++||++ |-.....+.++..+++....+++++..++
T Consensus 286 lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~ 365 (464)
T KOG3764|consen 286 LAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLW 365 (464)
T ss_pred HHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHh
Confidence 3334444444 56667755567787777788899999999999999999 65555566666677777888899999999
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHhhcCc---c---ccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHH
Q 007702 99 IARLLDGFGVGLAVTLVPLYISETAPS---E---IRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPA 172 (592)
Q Consensus 99 ~~R~l~G~~~g~~~~~~~~~i~E~~p~---~---~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~ 172 (592)
+-++..+++.+...+.......++... + .-|..-++.+.++++|..++ +.++.......|++|...+.++..
T Consensus 366 vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~G--P~~gg~iv~~iGF~wl~~iig~~n 443 (464)
T KOG3764|consen 366 VPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIG--PTFGGSLVEAIGFEWLMTIIGILN 443 (464)
T ss_pred hhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhcc--ccccchheeehhHHHHHHHHHHHH
Confidence 999999999888877655544444433 3 45777888889999999998 666777788889999988888888
Q ss_pred HHHHHHHHh
Q 007702 173 LLYFAFAVF 181 (592)
Q Consensus 173 ~~~~~l~~~ 181 (592)
+++..++.+
T Consensus 444 ~iyapvl~l 452 (464)
T KOG3764|consen 444 LIYAPVLLL 452 (464)
T ss_pred HHHHHHHHH
Confidence 776655433
No 231
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.75 E-value=0.0025 Score=67.15 Aligned_cols=117 Identities=21% Similarity=0.181 Sum_probs=91.4
Q ss_pred HHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcC-----chHHHHHH-HHHHHHHHHHHHhh-----c--------
Q 007702 32 IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLG-----RRPMLILS-SVLYFVSGLVMLWS-----P-------- 92 (592)
Q Consensus 32 i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~G-----RK~~li~~-~~l~~i~~~~~~~s-----~-------- 92 (592)
+..|++++....+..+++..+.+.+ .+..|+.+|+.+ ||..+++. .+++..+..+..++ .
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap~-R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAPL-RVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHH-HHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 5678999999999999998887664 788999999999 88777654 55555554444431 2
Q ss_pred cH---HHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHH
Q 007702 93 NV---YVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCM 149 (592)
Q Consensus 93 ~~---~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~ 149 (592)
.+ ....+.-++.|++.+...+...++++|.+|+++|++..++...+..+|..++.+.
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~ 144 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIV 144 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 22 2334456778889988889999999999999999999999999999999988543
No 232
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.72 E-value=0.00028 Score=56.97 Aligned_cols=71 Identities=17% Similarity=0.162 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHH
Q 007702 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLY 81 (592)
Q Consensus 11 ~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~ 81 (592)
+...+++.....+.+.|.++...++.|++..+.|++.++..+...++++++|.++||+|+++.++....++
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34445555566667777777778889999999999999999999999999999999999999888766554
No 233
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.67 E-value=0.00055 Score=74.71 Aligned_cols=170 Identities=19% Similarity=0.220 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCc---------hHHHHHH
Q 007702 8 AIAATIGNFLQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGR---------RPMLILS 77 (592)
Q Consensus 8 ~~~~~l~~~~~g~~~~~~~~~~~-~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GR---------K~~li~~ 77 (592)
++++.++.+...+...++....| |+++.+|.+..+.|++.++..+...+..+++|.++||.=+ |..-.++
T Consensus 260 vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~ 339 (466)
T KOG2532|consen 260 VWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIA 339 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHH
Confidence 44555556666666555555554 5788899999999999999999999999999999998855 2222233
Q ss_pred HHHHHHHHHHHHhhcc--H----HHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHH
Q 007702 78 SVLYFVSGLVMLWSPN--V----YVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVF 151 (592)
Q Consensus 78 ~~l~~i~~~~~~~s~~--~----~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~ 151 (592)
....+++.++.++.+. . ..+.++-.+.|+..++.+.. ..+. .|++-+.++++.+....+..++++.+.-
T Consensus 340 ~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~----~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg 414 (466)
T KOG2532|consen 340 FGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKN----HQDI-APQHAGFVMGIINFVGALAGFIAPLLVG 414 (466)
T ss_pred HHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhh----hhhc-cchHHHHHHHHHHHHHHHHHHHHHHhee
Confidence 3344444444455442 1 11222223333333333221 2222 4566789999999999998888854432
Q ss_pred HhHhc-CCCchhHHHHHHHHHHHHHHHHHHhh
Q 007702 152 GMSLL-ASPSWRLMLGVLSIPALLYFAFAVFF 182 (592)
Q Consensus 152 ~~~~~-~~~~Wr~~f~i~~i~~~~~~~l~~~~ 182 (592)
..... +...||++|.+.+++.++..++..++
T Consensus 415 ~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 415 IIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred eEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 22211 23489999999988887766443333
No 234
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.65 E-value=0.00047 Score=75.60 Aligned_cols=159 Identities=13% Similarity=0.080 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHhhHHhhhhh----cCchHHHHHHHHHHH
Q 007702 8 AIAATIGNFLQGWDNATIAGAIVYIKKD-LNLGTTVEGLVVAMSLIGATAITTCSGPISDW----LGRRPMLILSSVLYF 82 (592)
Q Consensus 8 ~~~~~l~~~~~g~~~~~~~~~~~~i~~~-~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr----~GRK~~li~~~~l~~ 82 (592)
++..++..+........+...+|.+.++ .+.+..+.+++...+.++.+++.+++|+++|| ..+|..++..+.++.
T Consensus 275 vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~ 354 (495)
T KOG2533|consen 275 VWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYA 354 (495)
T ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3445566666677777777788877766 56888999999999999999999999999999 778887777777766
Q ss_pred HHH-HHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhH-HHHHHHhhHHHHHHHHHHHhHhcCCCc
Q 007702 83 VSG-LVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNT-LPQFTGSGGMFLAYCMVFGMSLLASPS 160 (592)
Q Consensus 83 i~~-~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~-~~~~~~~~G~~l~~~~~~~~~~~~~~~ 160 (592)
+.. +...+..+......+-+....+.+...+++...+++...++.|..... ....+.+.+..+++ ..+.....+...
T Consensus 355 ~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~-~~~~~~~ap~y~ 433 (495)
T KOG2533|consen 355 IIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISG-QLFRSLDAPRYG 433 (495)
T ss_pred HHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhh-hhcccccCcchh
Confidence 555 444445444444444455555566666777777777776666544333 33333333333321 222222333457
Q ss_pred hhHHHHH
Q 007702 161 WRLMLGV 167 (592)
Q Consensus 161 Wr~~f~i 167 (592)
|-..|..
T Consensus 434 ~~~~f~~ 440 (495)
T KOG2533|consen 434 WGAVFYM 440 (495)
T ss_pred hhhHHHH
Confidence 7777743
No 235
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.63 E-value=0.0054 Score=66.12 Aligned_cols=119 Identities=8% Similarity=0.022 Sum_probs=73.5
Q ss_pred HHHHH-HHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHH-----hhccHHHHHHH
Q 007702 27 GAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML-----WSPNVYVLCIA 100 (592)
Q Consensus 27 ~~~~~-i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~-----~s~~~~~ll~~ 100 (592)
...|. +++.+|.+..+.++.......+..++..+.+.+.++.++++.+.....+..++.++.. ..++++.+++.
T Consensus 239 ~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~ 318 (413)
T PRK15403 239 AVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLG 318 (413)
T ss_pred HhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHH
Confidence 34454 5566799999999988888888888888888876554444443332333333332222 12344445677
Q ss_pred HHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHH
Q 007702 101 RLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLA 146 (592)
Q Consensus 101 R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~ 146 (592)
.++.++|.+...+......- ......+|+..++.......+..++
T Consensus 319 ~~l~~~G~~~~~p~~~~~al-~~~~~~~G~a~a~~~~~~~~~~~~~ 363 (413)
T PRK15403 319 TSLYAFGIGLIFPTLFRFTL-FSNNLPKGTVSASLNMVILMVMAVS 363 (413)
T ss_pred HHHHHHHHHHHhHHHHHHHh-ccCCCCCcHHHHHHHHHHHHHHHHH
Confidence 88888888888777664332 2223347888887776665555554
No 236
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.61 E-value=0.0016 Score=69.15 Aligned_cols=159 Identities=15% Similarity=0.198 Sum_probs=119.6
Q ss_pred HHHHHHHH-cCCCchHHH-HHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 007702 28 AIVYIKKD-LNLGTTVEG-LVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDG 105 (592)
Q Consensus 28 ~~~~i~~~-~~~s~~~~g-li~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G 105 (592)
..|++... .|++..+.. -+.-+..=.++...++...+.|.++.|++++++.+..++..++..+.++...+-+..++-|
T Consensus 26 l~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg 105 (412)
T PF01770_consen 26 LTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYG 105 (412)
T ss_pred chHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHH
Confidence 44555554 677764432 2333444455667778889999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhccC
Q 007702 106 FGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPE 185 (592)
Q Consensus 106 ~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pE 185 (592)
++.+.. .+.++|+--..|+++--++.+......-+|.+++.+++-.+......+++....+......+ .++..+++|.
T Consensus 106 ~~~a~e-vay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~-a~~~~~fLP~ 183 (412)
T PF01770_consen 106 LATAAE-VAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSL-ALLIALFLPM 183 (412)
T ss_pred HHHHHH-HHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHHHcCC
Confidence 988764 56678888888888888888888888888888887666665555667788887665554444 4445577787
Q ss_pred Chh
Q 007702 186 SPR 188 (592)
Q Consensus 186 sP~ 188 (592)
.++
T Consensus 184 ~~~ 186 (412)
T PF01770_consen 184 PKR 186 (412)
T ss_pred CCc
Confidence 654
No 237
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.51 E-value=0.0063 Score=63.83 Aligned_cols=157 Identities=13% Similarity=0.085 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhh
Q 007702 13 IGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS 91 (592)
Q Consensus 13 l~~~~~g~~~~~~~~~~~~-i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s 91 (592)
++.|++--........++. +.+..+++..+.....+.+..+.++|-+++.++..|+-..|.+...+++.++.++..+++
T Consensus 243 l~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~ 322 (422)
T COG0738 243 LAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALI 322 (422)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444443334444444444 444488888999999999999999999999999999999999999999999988989999
Q ss_pred ccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHH
Q 007702 92 PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIP 171 (592)
Q Consensus 92 ~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~ 171 (592)
++...+. +-++.|+..++.+|...+...+..| ++-....++.-++...|.++- ...+...+..+-...+....++
T Consensus 323 ~g~v~~~-~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~~l~maivGGAiiP---~l~G~i~d~~g~~~~~~~~pll 397 (422)
T COG0738 323 GGVVALY-ALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSGLLVMAIVGGAIIP---PLQGVIADMFGIQLTFLIVPLL 397 (422)
T ss_pred cChHHHH-HHHHHHHHhHHHHHHHHHHHHhccC-ccccccceeeeeheecchHHH---HHHHHHHHhhhhHHHHHHHHHH
Confidence 8855444 5677899999999999999999999 444444555444544554443 3344445555655555533444
Q ss_pred HHH
Q 007702 172 ALL 174 (592)
Q Consensus 172 ~~~ 174 (592)
+.+
T Consensus 398 c~l 400 (422)
T COG0738 398 CYL 400 (422)
T ss_pred HHH
Confidence 433
No 238
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.50 E-value=0.014 Score=61.63 Aligned_cols=147 Identities=12% Similarity=0.059 Sum_probs=115.4
Q ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhh-hcCchHHHHHHHHHHHHHHHHHHh---hccHHHHHHHHHHHH
Q 007702 30 VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISD-WLGRRPMLILSSVLYFVSGLVMLW---SPNVYVLCIARLLDG 105 (592)
Q Consensus 30 ~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~D-r~GRK~~li~~~~l~~i~~~~~~~---s~~~~~ll~~R~l~G 105 (592)
||=.+.||++..+.+.+.+....|..+|-.+.|++.. |.+.|+.-.+++.+.+++..+..+ ..+.+.+...-++.|
T Consensus 233 Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G 312 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLG 312 (403)
T ss_pred CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 5566779999999999999999999999999999877 678888888888888777655544 357888999999999
Q ss_pred hhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHh-----Hhc---CCCchhHHHHHHHHHHHHHH
Q 007702 106 FGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGM-----SLL---ASPSWRLMLGVLSIPALLYF 176 (592)
Q Consensus 106 ~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~-----~~~---~~~~Wr~~f~i~~i~~~~~~ 176 (592)
++.|.+.......+.+..++++-|..++.+.....+...++....-.. ... ...+|-.+|.+.++..++.+
T Consensus 313 ~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~ 391 (403)
T PF03209_consen 313 LGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAAL 391 (403)
T ss_pred HhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998877776666653333221 112 23467778877766655543
No 239
>PTZ00207 hypothetical protein; Provisional
Probab=97.34 E-value=0.0033 Score=70.45 Aligned_cols=160 Identities=13% Similarity=0.158 Sum_probs=109.9
Q ss_pred HHHHHHHHc-CCCc-hH-HHHHHHHHHHHHHHHHhhHHhhhhh---------cCchHHHHHHHHHHHHHHHHHHhhccHH
Q 007702 28 AIVYIKKDL-NLGT-TV-EGLVVAMSLIGATAITTCSGPISDW---------LGRRPMLILSSVLYFVSGLVMLWSPNVY 95 (592)
Q Consensus 28 ~~~~i~~~~-~~s~-~~-~gli~s~~~lg~~ig~~~~G~l~Dr---------~GRK~~li~~~~l~~i~~~~~~~s~~~~ 95 (592)
-+.+|.+.+ |.+. +. ..++++++.++..+|-+.+|.++.. +-|--.+.+..+ +.++.++++++-...
T Consensus 375 N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~ 453 (591)
T PTZ00207 375 NARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKA 453 (591)
T ss_pred cHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCcc
Confidence 445666777 6523 22 2337888889999999998888732 222223334444 666666666654436
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcC------C------CchhH
Q 007702 96 VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA------S------PSWRL 163 (592)
Q Consensus 96 ~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~------~------~~Wr~ 163 (592)
.+.+.-++.|++.|..+++.+..++|+|- ++-|+.-.+......+|.++-....++..... . .=.|.
T Consensus 454 ~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~ 532 (591)
T PTZ00207 454 ALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVM 532 (591)
T ss_pred HhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHh
Confidence 88999999999999999999999999999 88888888777777888776544444432211 0 11788
Q ss_pred HHHHHHHHHHHHHHHHHhhccCChhH
Q 007702 164 MLGVLSIPALLYFAFAVFFLPESPRW 189 (592)
Q Consensus 164 ~f~i~~i~~~~~~~l~~~~~pEsP~~ 189 (592)
+|.+.+.++++.+++.....-++.++
T Consensus 533 ~~~v~~~~~~~g~~~s~~l~~R~r~~ 558 (591)
T PTZ00207 533 PLAFLLGLSFLAFITSTYVHLQYRRL 558 (591)
T ss_pred HHHHHHHHHHHHHHHHhheeeehHHH
Confidence 99998888888777665555566444
No 240
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.34 E-value=0.0078 Score=67.27 Aligned_cols=139 Identities=18% Similarity=0.096 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHcCCCc---hHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHH-HHHHHHHHHHHH
Q 007702 12 TIGNFLQGWDNATIAGAIVYI-KKDLNLGT---TVEGLVVAMSLIGATAITTCSGPISDWLGRRPML-ILSSVLYFVSGL 86 (592)
Q Consensus 12 ~l~~~~~g~~~~~~~~~~~~i-~~~~~~s~---~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~l-i~~~~l~~i~~~ 86 (592)
.+..|..|..........|.. ..-|+-+. ...++....+.++.++|+.+.|.+.-+++|-|.. +++.+++.++.-
T Consensus 316 lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~G 395 (599)
T PF06609_consen 316 LVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCG 395 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHH
Confidence 345555555555555555553 33455443 3567888888999999999999999888765544 567666665544
Q ss_pred HHHhh--ccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHH
Q 007702 87 VMLWS--PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV 150 (592)
Q Consensus 87 ~~~~s--~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~ 150 (592)
+++.. +|....+..-++.|++.|.......+...-..|++.-|...++....-.+|..+++.+.
T Consensus 396 ama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy 461 (599)
T PF06609_consen 396 AMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIY 461 (599)
T ss_pred HHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 44432 45555667788999999998888888778888999999999988777777776664443
No 241
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.09 E-value=0.036 Score=61.01 Aligned_cols=140 Identities=11% Similarity=0.052 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHHHHhhHHhhhhhcCc--hH-----HHHHHHHHHHHHHHHHHhh---------ccHHHHHHHHHHHHh
Q 007702 43 EGLVVAMSLIGATAITTCSGPISDWLGR--RP-----MLILSSVLYFVSGLVMLWS---------PNVYVLCIARLLDGF 106 (592)
Q Consensus 43 ~gli~s~~~lg~~ig~~~~G~l~Dr~GR--K~-----~li~~~~l~~i~~~~~~~s---------~~~~~ll~~R~l~G~ 106 (592)
.+++.++..+..++.+|+.+.+=.|.+| |. =+.+++++.+++.+++.++ .+.+++++.-++.++
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~ 389 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGF 389 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 5677888888888888887777566532 21 1567777777776666431 256778888999999
Q ss_pred hhhhhhhHHHHHHHhhcCccccchhhHHHHHH-HhhHHHHHHHHHHHhHhc----------CCCchhHHHHHHHHHHHHH
Q 007702 107 GVGLAVTLVPLYISETAPSEIRGRLNTLPQFT-GSGGMFLAYCMVFGMSLL----------ASPSWRLMLGVLSIPALLY 175 (592)
Q Consensus 107 ~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~-~~~G~~l~~~~~~~~~~~----------~~~~Wr~~f~i~~i~~~~~ 175 (592)
|-=...|+..+.+++++|++.||+.++.+.+. ..+|..++..+.-..... +...+...|...++..++.
T Consensus 390 gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 390 AELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998763 467776653332222100 0124556677666666555
Q ss_pred -HHHHHhh
Q 007702 176 -FAFAVFF 182 (592)
Q Consensus 176 -~~l~~~~ 182 (592)
.++.+.+
T Consensus 470 ~~~~~~~~ 477 (493)
T PRK15462 470 VGVVLMIW 477 (493)
T ss_pred HHHHHHHH
Confidence 3433333
No 242
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=96.96 E-value=0.014 Score=65.23 Aligned_cols=161 Identities=17% Similarity=0.213 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhc-CchHHHHHHHHHHHHHHHHHHhhcc---------
Q 007702 24 TIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL-GRRPMLILSSVLYFVSGLVMLWSPN--------- 93 (592)
Q Consensus 24 ~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~-GRK~~li~~~~l~~i~~~~~~~s~~--------- 93 (592)
.....+.++..+++.+...+.-.++.+.-...+.+++.+.++|-| ||-+++.++.+++.++.++..++..
T Consensus 56 ~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~ 135 (571)
T KOG1237|consen 56 LVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMC 135 (571)
T ss_pred chhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc
Confidence 346678889999999887777788888777888889999999975 9999999999999888655543211
Q ss_pred ----------------HHHHHHHHHHHHhhhhhhhhHHHHHHHhhcC---ccc-cc--hhhHHHHHHHhhHHHHHHHHHH
Q 007702 94 ----------------VYVLCIARLLDGFGVGLAVTLVPLYISETAP---SEI-RG--RLNTLPQFTGSGGMFLAYCMVF 151 (592)
Q Consensus 94 ----------------~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p---~~~-Rg--~~~~~~~~~~~~G~~l~~~~~~ 151 (592)
...+..+..+..+|.|+.-+....+-+|-++ ++. +. ..+.++.+...+|.+++ ...
T Consensus 136 ~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a--~t~ 213 (571)
T KOG1237|consen 136 KFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLA--QTV 213 (571)
T ss_pred cCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHH--HHH
Confidence 2356666777778999988999999999888 322 23 56677778888888887 444
Q ss_pred HhHhcCCCchhHHHHHHHHHHHHHHHHHHhhccCChhH
Q 007702 152 GMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRW 189 (592)
Q Consensus 152 ~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~ 189 (592)
.....+..+|.+.|.+..+...+.+ ..|++-+|.|
T Consensus 214 ~vyiq~~~~w~lgf~i~~~~~~lai---~iF~~g~~~y 248 (571)
T KOG1237|consen 214 LVYIQDNVGWKLGFGIPTVLNALAI---LIFLPGFPFY 248 (571)
T ss_pred HHhhhhcccceeeccHHHHHHHHHH---HHHHcCceeE
Confidence 4445567899999987777665533 3344444444
No 243
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.42 E-value=0.023 Score=62.00 Aligned_cols=119 Identities=12% Similarity=0.158 Sum_probs=99.8
Q ss_pred HHHHHcCCCchHHHHHHHHHHHHHHHHHhhHH-hhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhh
Q 007702 31 YIKKDLNLGTTVEGLVVAMSLIGATAITTCSG-PISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVG 109 (592)
Q Consensus 31 ~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G-~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g 109 (592)
+++..|+++..+.+.+.+...+...++.++.. .+...+|-|+.+.++++...+..++.+++.+.|+++...++.++. +
T Consensus 267 yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~-~ 345 (463)
T KOG2816|consen 267 YLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA-G 345 (463)
T ss_pred EEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh-c
Confidence 45677899999999888887777777777666 777888999999999999999999999999999999988887764 4
Q ss_pred hhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHH
Q 007702 110 LAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV 150 (592)
Q Consensus 110 ~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~ 150 (592)
...|...+.++-+..++++|+..++....-.+..++++.+.
T Consensus 346 ~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~ 386 (463)
T KOG2816|consen 346 IVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALY 386 (463)
T ss_pred chhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHH
Confidence 55677888999999999999999998888887777775443
No 244
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.34 E-value=0.31 Score=52.88 Aligned_cols=104 Identities=19% Similarity=0.185 Sum_probs=75.9
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHhhh---hhcCchHHHHHHHHHHHHHHHHHHhh------------------ccHHHHHH
Q 007702 41 TVEGLVVAMSLIGATAITTCSGPIS---DWLGRRPMLILSSVLYFVSGLVMLWS------------------PNVYVLCI 99 (592)
Q Consensus 41 ~~~gli~s~~~lg~~ig~~~~G~l~---Dr~GRK~~li~~~~l~~i~~~~~~~s------------------~~~~~ll~ 99 (592)
...++..-...+|..++..+.+.++ +++||++.+.++.++..++.++...+ +++...++
T Consensus 279 ~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~i 358 (461)
T KOG3098|consen 279 YLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALI 358 (461)
T ss_pred hHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHH
Confidence 3444445555566666667777776 46899999999999988887776542 24667777
Q ss_pred HHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHH
Q 007702 100 ARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFL 145 (592)
Q Consensus 100 ~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l 145 (592)
.-++.|++-+...+..+.++.... ++.|..+.++.-+-..++..+
T Consensus 359 i~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v 403 (461)
T KOG3098|consen 359 IGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCV 403 (461)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999 666777777655555555443
No 245
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.27 E-value=0.073 Score=57.64 Aligned_cols=105 Identities=21% Similarity=0.232 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCcc
Q 007702 47 VAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSE 126 (592)
Q Consensus 47 ~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~ 126 (592)
.++......+.+++++.+.|.+|.|..++++...+....+...+-+ -+.++++-.+.|+|.+..++.--.|++|.++++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N-~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPN-SYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcc-hHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 6677777888999999999999999999999999988877666555 556677889999999999999999999999999
Q ss_pred ccchhhHHHHHHHhhHHHHHHHHHHH
Q 007702 127 IRGRLNTLPQFTGSGGMFLAYCMVFG 152 (592)
Q Consensus 127 ~Rg~~~~~~~~~~~~G~~l~~~~~~~ 152 (592)
.+.+..++.-.....+.++|.+..+.
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~ 160 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFI 160 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhhee
Confidence 99999988777777777776444433
No 246
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.23 E-value=0.13 Score=55.56 Aligned_cols=128 Identities=17% Similarity=0.158 Sum_probs=92.6
Q ss_pred HHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHH---HHHHhhc-------cHH
Q 007702 26 AGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG---LVMLWSP-------NVY 95 (592)
Q Consensus 26 ~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~---~~~~~s~-------~~~ 95 (592)
.+.+..+.+.-|+++...|..-+...+..+.|+++..++.+|+|..+.=+++...-.+.- +...+.+ +..
T Consensus 278 ~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~ 357 (432)
T PF06963_consen 278 GGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAY 357 (432)
T ss_pred cHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHH
Confidence 333333444449999999999999999999999999999999999998888876543322 2222322 334
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHh
Q 007702 96 VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (592)
Q Consensus 96 ~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~ 153 (592)
.++.+-.+.=+|.=.+..+..-++-|..|+++||..++.-....++--++.+.+....
T Consensus 358 ~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 358 LLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4444555555666666777888899999999999999998877777777765555443
No 247
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.17 E-value=0.012 Score=62.61 Aligned_cols=123 Identities=15% Similarity=0.189 Sum_probs=90.7
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhh----cCchHHHHHHHH-HHHHHHHHHHhhccH--------
Q 007702 28 AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW----LGRRPMLILSSV-LYFVSGLVMLWSPNV-------- 94 (592)
Q Consensus 28 ~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr----~GRK~~li~~~~-l~~i~~~~~~~s~~~-------- 94 (592)
.++.+.+..|++....+.+--...+...+.+++.|..+|| |||||.+++... +..++.++..++.++
T Consensus 54 y~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~ 133 (498)
T KOG0637|consen 54 YLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNE 133 (498)
T ss_pred cccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCc
Confidence 4455677889888777777777777888889999999995 898888776544 455666777775443
Q ss_pred ---------HHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccch-hhHHHHHHHhhHHHHHHHHH
Q 007702 95 ---------YVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGR-LNTLPQFTGSGGMFLAYCMV 150 (592)
Q Consensus 95 ---------~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~-~~~~~~~~~~~G~~l~~~~~ 150 (592)
..++++-.+.=++.-.....+-++++|.+..+.+-+ +++++.++..+|..++|...
T Consensus 134 ~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g 199 (498)
T KOG0637|consen 134 RKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALG 199 (498)
T ss_pred ccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecc
Confidence 333344444445555666778899999998877766 99999999999998886554
No 248
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.15 E-value=0.01 Score=58.73 Aligned_cols=90 Identities=21% Similarity=0.306 Sum_probs=65.1
Q ss_pred HHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhhh
Q 007702 33 KKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAV 112 (592)
Q Consensus 33 ~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~ 112 (592)
-+.++....+++.+...-+-..++...+.|.++|+.|||+.-+.-++.++++++ .-.++.|-.++++|++.|+..+..+
T Consensus 64 YstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGGiaTsLLF 142 (454)
T KOG4332|consen 64 YSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGGIATSLLF 142 (454)
T ss_pred ehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhhHHHHHHH
Confidence 344555555555544444444455566778999999999988777777777654 4567899999999999999998887
Q ss_pred hHHHH-HHHhhc
Q 007702 113 TLVPL-YISETA 123 (592)
Q Consensus 113 ~~~~~-~i~E~~ 123 (592)
..--. +++|.-
T Consensus 143 SaFEsWliaEHn 154 (454)
T KOG4332|consen 143 SAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHhh
Confidence 76654 567765
No 249
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.13 E-value=0.17 Score=54.73 Aligned_cols=141 Identities=14% Similarity=0.148 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHHHHHhhHHhhhhhcCch---H----HHHHHHHHHHHHHHHHHhh----------ccHHHHHHHHHHH
Q 007702 42 VEGLVVAMSLIGATAITTCSGPISDWLGRR---P----MLILSSVLYFVSGLVMLWS----------PNVYVLCIARLLD 104 (592)
Q Consensus 42 ~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK---~----~li~~~~l~~i~~~~~~~s----------~~~~~ll~~R~l~ 104 (592)
..++..+...+..++.+++...+--+.++| + -+-++.++++.+.+++... -+.++++..-+++
T Consensus 325 p~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~ 404 (498)
T COG3104 325 PPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQ 404 (498)
T ss_pred CHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHH
Confidence 356777777777777777777776664444 2 2335555555555555443 2578889999999
Q ss_pred HhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhH----hcCCCchhHHHHHHHHHHHHHHHHHH
Q 007702 105 GFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMS----LLASPSWRLMLGVLSIPALLYFAFAV 180 (592)
Q Consensus 105 G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~----~~~~~~Wr~~f~i~~i~~~~~~~l~~ 180 (592)
+++-=+..|+...+++..+|+...+..++++-+....|..++..+.-... ..+...-...|+..+...++..+...
T Consensus 405 s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~ 484 (498)
T COG3104 405 SFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLL 484 (498)
T ss_pred HHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988887743332111 12222344555555555555444333
Q ss_pred hh
Q 007702 181 FF 182 (592)
Q Consensus 181 ~~ 182 (592)
..
T Consensus 485 ~~ 486 (498)
T COG3104 485 LL 486 (498)
T ss_pred Hh
Confidence 33
No 250
>PRK03612 spermidine synthase; Provisional
Probab=96.05 E-value=0.6 Score=51.95 Aligned_cols=160 Identities=14% Similarity=0.032 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHH---HHHHH--
Q 007702 15 NFLQGWDNATIAGAI-VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV---SGLVM-- 88 (592)
Q Consensus 15 ~~~~g~~~~~~~~~~-~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i---~~~~~-- 88 (592)
.|+.|+....+-... -.+..-+|-+....+.+++++.+|..+|+.+++.+.++.-|+...+ -..+..+ +..+.
T Consensus 23 ~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~-e~~i~l~~~~~~~ll~~ 101 (521)
T PRK03612 23 VFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAV-ELLLALLGGLSALILYA 101 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 333444433333322 2345567878888999999999999999999998874433332221 1111111 11111
Q ss_pred --Hhhc-cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCc-hhHH
Q 007702 89 --LWSP-NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS-WRLM 164 (592)
Q Consensus 89 --~~s~-~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~-Wr~~ 164 (592)
.+.. ....++..-++.++..|+..|...-+..+... +.-|...+-......+|.++|.+.... .+....| .+..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~-vLlp~lG~~~t~ 179 (521)
T PRK03612 102 AFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPF-LLLPRLGLIRTA 179 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHH-HHHHhcchHHHH
Confidence 1111 11223344566778888887776665544322 112445566666677777777544322 2333334 3444
Q ss_pred HHHHHHHHHHHHHH
Q 007702 165 LGVLSIPALLYFAF 178 (592)
Q Consensus 165 f~i~~i~~~~~~~l 178 (592)
+ +.+++.++..++
T Consensus 180 ~-~~a~l~~~~a~~ 192 (521)
T PRK03612 180 A-LTGSLNLLAALV 192 (521)
T ss_pred H-HHHHHHHHHHHH
Confidence 4 444444443433
No 251
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.93 E-value=0.036 Score=58.83 Aligned_cols=104 Identities=16% Similarity=0.237 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHHHHHHhh--c-------cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccc---cchhhHHHHHHH
Q 007702 72 PMLILSSVLYFVSGLVMLWS--P-------NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEI---RGRLNTLPQFTG 139 (592)
Q Consensus 72 ~~li~~~~l~~i~~~~~~~s--~-------~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~---Rg~~~~~~~~~~ 139 (592)
|+++++.+++.+|.++..++ + +.+.++++-++.++|.|+.=|....+.+|.++++. |.....++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 57888999999998885443 2 23678888999999999999999999999999763 455666778889
Q ss_pred hhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHH
Q 007702 140 SGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFA 177 (592)
Q Consensus 140 ~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~ 177 (592)
++|.+++. .......++.+|.+.|++.++..++..+
T Consensus 82 n~G~~~~~--~~~~~i~~~~~~~~~f~i~~~~~~~~~~ 117 (372)
T PF00854_consen 82 NIGSLFSP--TLVPYIQQNYGWFLGFGIPAIGMLLALI 117 (372)
T ss_dssp HHHHHHHH--HCCCHHHHCS-HHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhc--ccchhhccccchhhhhhHHHHHHHHHHH
Confidence 99998883 3334445678999999988877766443
No 252
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.71 E-value=0.14 Score=54.48 Aligned_cols=138 Identities=17% Similarity=0.133 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHH--HHHH--
Q 007702 9 IAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVL--YFVS-- 84 (592)
Q Consensus 9 ~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l--~~i~-- 84 (592)
+-+.+.++...+.+..+.+.+. +..++.-.....-+...+|.+|..++---...+ |+ |+..+.+.+- ..+.
T Consensus 250 iPL~lVY~aEY~InqGv~~tl~-fp~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~ 324 (402)
T PF02487_consen 250 IPLFLVYFAEYFINQGVAPTLL-FPNSFFSPRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLL 324 (402)
T ss_pred HHHHHHHHHHHHHHhchHHHhc-CCccCCCHHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHH
Confidence 3344555555554444433321 112233334677888888888888875433222 33 3333333222 2222
Q ss_pred -HHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHH
Q 007702 85 -GLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVF 151 (592)
Q Consensus 85 -~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~ 151 (592)
....-+.++.|.+++.-+..|+..|..+.-+...+.|-.|+++|...++...++-++|.+++.++..
T Consensus 325 l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l 392 (402)
T PF02487_consen 325 LQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGL 392 (402)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 2222345889999999999999999999999999999999999999999999999999998855543
No 253
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.55 E-value=0.22 Score=52.09 Aligned_cols=118 Identities=18% Similarity=0.201 Sum_probs=101.9
Q ss_pred HHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcC--chHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhh
Q 007702 33 KKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLG--RRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGL 110 (592)
Q Consensus 33 ~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~G--RK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~ 110 (592)
...|+.++.+.|-+.+...++.++.+....+..|+.. -+-.+..++.++.-..++...++....+.++-.+-.++.+.
T Consensus 289 ~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~ 368 (451)
T KOG2615|consen 289 HGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTAS 368 (451)
T ss_pred cCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHH
Confidence 3668899999999999888888888888888889887 77777777777777777778888888888899999999888
Q ss_pred hhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHH
Q 007702 111 AVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV 150 (592)
Q Consensus 111 ~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~ 150 (592)
..+....++....|.++||.++|+.....+++-.+++...
T Consensus 369 ~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~ 408 (451)
T KOG2615|consen 369 VVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVS 408 (451)
T ss_pred hhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhh
Confidence 9999999999999999999999999999999999996554
No 254
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.00 E-value=3.1 Score=45.56 Aligned_cols=125 Identities=7% Similarity=0.081 Sum_probs=86.1
Q ss_pred HHHHHHHcCCC-----chHHHHHHHHHHHHHHHH-HhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhh--cc-------
Q 007702 29 IVYIKKDLNLG-----TTVEGLVVAMSLIGATAI-TTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS--PN------- 93 (592)
Q Consensus 29 ~~~i~~~~~~s-----~~~~gli~s~~~lg~~ig-~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s--~~------- 93 (592)
+-.+++.+.++ .....++-+...+...+. .++.+.+++|++|++.+-+....+++..+++++. |+
T Consensus 26 LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~ 105 (472)
T TIGR00769 26 LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPT 105 (472)
T ss_pred HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCc
Confidence 44567776663 246677777666666555 8889999999999999988777776665555543 11
Q ss_pred ----------------------HHHHHHHHHHHHhhhhhhhh-HHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHH
Q 007702 94 ----------------------VYVLCIARLLDGFGVGLAVT-LVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV 150 (592)
Q Consensus 94 ----------------------~~~ll~~R~l~G~~~g~~~~-~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~ 150 (592)
.|...+.-+...+-.....+ .-+.++.|++..++-.+..++..++.++|.++++...
T Consensus 106 ~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~ 185 (472)
T TIGR00769 106 ALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTI 185 (472)
T ss_pred HHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12222223333444444444 6678999999999999999999999999999986555
Q ss_pred HHh
Q 007702 151 FGM 153 (592)
Q Consensus 151 ~~~ 153 (592)
...
T Consensus 186 ~~~ 188 (472)
T TIGR00769 186 KYF 188 (472)
T ss_pred HHH
Confidence 443
No 255
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.86 E-value=0.89 Score=48.52 Aligned_cols=135 Identities=13% Similarity=0.142 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCc
Q 007702 46 VVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPS 125 (592)
Q Consensus 46 i~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~ 125 (592)
+.-+-.+-..+..+++.++.+|+.-+.=+.+..++..++.++.+++++++.=+++-++.+++.|..-.....+.+ .+|+
T Consensus 64 Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~~ 142 (402)
T PF02487_consen 64 VLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FYGK 142 (402)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hcCc
Confidence 444444555666677888888887666667777888889999999999999899999999998887666655543 5554
Q ss_pred cccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhccCC
Q 007702 126 EIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (592)
Q Consensus 126 ~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEs 186 (592)
. ..+-+..+...+.++++....++.. ...+-|..+.+...++++.++..++.+|.+
T Consensus 143 ~----~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~ 198 (402)
T PF02487_consen 143 S----SLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSP 198 (402)
T ss_pred c----ccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 2 2333344444455555444433333 344567777777776665554444555543
No 256
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=94.04 E-value=2.6 Score=44.42 Aligned_cols=141 Identities=21% Similarity=0.194 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhh-----hcCchHHHHHH-HHHH
Q 007702 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISD-----WLGRRPMLILS-SVLY 81 (592)
Q Consensus 8 ~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~D-----r~GRK~~li~~-~~l~ 81 (592)
+..+.+-+.++|...+... .+|.+.+.-|.|.+..+...-.+.= .---+++.++.| |+||||.-++- ..+.
T Consensus 33 illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~P--~sLKllWaPiVDs~y~k~~GrrksWvvp~q~ll 109 (510)
T KOG3574|consen 33 ILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYWP--FSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLL 109 (510)
T ss_pred HHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhhH--HHHHHHHHhhhHHHHHHhhccccceeeehHHHH
Confidence 3455566788999998888 8899888778777666554433211 123467888888 99999875432 2222
Q ss_pred HHHHHHHHh-----------hccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHH
Q 007702 82 FVSGLVMLW-----------SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV 150 (592)
Q Consensus 82 ~i~~~~~~~-----------s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~ 150 (592)
...+...+. .|+...+...-++.-|..+.-..++=.+.-.+..+++-|.+.+...++...|.++++.+.
T Consensus 110 G~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 110 GLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred HHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhccee
Confidence 222222222 234444444445555555555555556666777888888888888888888888875544
Q ss_pred H
Q 007702 151 F 151 (592)
Q Consensus 151 ~ 151 (592)
+
T Consensus 190 L 190 (510)
T KOG3574|consen 190 L 190 (510)
T ss_pred e
Confidence 3
No 257
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=93.95 E-value=0.23 Score=53.11 Aligned_cols=100 Identities=16% Similarity=0.064 Sum_probs=69.0
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcC-chHHHHHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHhhhhh
Q 007702 36 LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLG-RRPMLILSSVLYFVSGLVMLWS----PNVYVLCIARLLDGFGVGL 110 (592)
Q Consensus 36 ~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~G-RK~~li~~~~l~~i~~~~~~~s----~~~~~ll~~R~l~G~~~g~ 110 (592)
-|.+....|.+.....++.++++.++|.+.||.. -|.++++......++++..... ...+.++....+.|++..+
T Consensus 296 sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~ 375 (480)
T KOG2563|consen 296 SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTG 375 (480)
T ss_pred ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcC
Confidence 3445567899999999999999999999999974 5556666666655554222221 2335566667778888888
Q ss_pred hhhHHHHHHHhhcCccccchhhHHH
Q 007702 111 AVTLVPLYISETAPSEIRGRLNTLP 135 (592)
Q Consensus 111 ~~~~~~~~i~E~~p~~~Rg~~~~~~ 135 (592)
.+|+..-+..|..-|..-+...|+.
T Consensus 376 ~~Pig~ElgvE~TyPv~E~tSsGll 400 (480)
T KOG2563|consen 376 YLPIGFELGVETTYPVAEGTSSGLL 400 (480)
T ss_pred CCCcceeeeeeeccccCCcccceeE
Confidence 8888888888876555444444443
No 258
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=93.73 E-value=0.036 Score=60.18 Aligned_cols=71 Identities=20% Similarity=0.172 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHH
Q 007702 13 IGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (592)
Q Consensus 13 l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i 83 (592)
+.++..+...+.+-|.++.+-+++|+++.+.|.++.+-.+..+++.+++|+++||+-+||.++++.++..+
T Consensus 18 ~f~~~~~~~~g~l~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v 88 (618)
T KOG3762|consen 18 LFYLFFGARFGSLFPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSV 88 (618)
T ss_pred eeeeeeeecccccchHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHH
Confidence 33444455566677888889999999999999999999999999999999999999877777766655443
No 259
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=93.67 E-value=0.49 Score=51.43 Aligned_cols=148 Identities=13% Similarity=0.096 Sum_probs=95.0
Q ss_pred CCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhh----------ccHHHHHHHHHHHHhh
Q 007702 38 LGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS----------PNVYVLCIARLLDGFG 107 (592)
Q Consensus 38 ~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s----------~~~~~ll~~R~l~G~~ 107 (592)
+++...+.+..+..++.++|..+.....-+..-|+++.++.++.++..+....- ++.+..+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 667777777788888888888888888778888999988888877766543321 1112223334555666
Q ss_pred hhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhH---hc---CCCchhHHHHHHHHHHHHHHHHHHh
Q 007702 108 VGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMS---LL---ASPSWRLMLGVLSIPALLYFAFAVF 181 (592)
Q Consensus 108 ~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~---~~---~~~~Wr~~f~i~~i~~~~~~~l~~~ 181 (592)
.+..+-....+++|++|+..-|...++.....++|..++..+..... .. +..+-.+..++..+..++ .+...+
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll-~l~ll~ 410 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLL-PLPLLF 410 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHH-HHHHHH
Confidence 66666677788999999999999888877777777766644443321 11 111223334444454543 334455
Q ss_pred hccCC
Q 007702 182 FLPES 186 (592)
Q Consensus 182 ~~pEs 186 (592)
++|+.
T Consensus 411 lLp~~ 415 (433)
T PF03092_consen 411 LLPPQ 415 (433)
T ss_pred HcCCC
Confidence 67765
No 260
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=90.84 E-value=1.3 Score=50.59 Aligned_cols=58 Identities=10% Similarity=0.084 Sum_probs=44.8
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHHH-HHHHHHhhHHhhhhhcC--chHHHHHHHHHHHHHH
Q 007702 28 AIVYIKKDLNLGTTVEGLVVAMSLI-GATAITTCSGPISDWLG--RRPMLILSSVLYFVSG 85 (592)
Q Consensus 28 ~~~~i~~~~~~s~~~~gli~s~~~l-g~~ig~~~~G~l~Dr~G--RK~~li~~~~l~~i~~ 85 (592)
...+++..+|++..+.+++.+...+ +.++|.++.|+++||++ .|+++.++.++.+++.
T Consensus 353 lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~ 413 (633)
T TIGR00805 353 LPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSY 413 (633)
T ss_pred HHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHH
Confidence 3445777899999999999988776 67899999999999998 4566666665555553
No 261
>PF12832 MFS_1_like: MFS_1 like family
Probab=90.34 E-value=0.84 Score=36.68 Aligned_cols=58 Identities=22% Similarity=0.251 Sum_probs=45.1
Q ss_pred HHHHHhhcccchhhchHHHHHHcCchhhhhccCCCCchhHHHHHHHHHHHHhhhHhHHHHHhhhcCCC
Q 007702 525 QILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRR 592 (592)
Q Consensus 525 ~~~qQ~sGin~i~~Y~~~i~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~a~~lvd~~GRR 592 (592)
..+-.+++...+..|.|..+++.|+ +....-++..+..+..+++..+...++||+|||
T Consensus 8 ~yf~~f~~~g~~~Pfl~~~~~~~Gl----------~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~ 65 (77)
T PF12832_consen 8 FYFFYFAALGCLYPFLPLYLKQLGL----------SPSQIGILSAIRPLIRFLAPPLWGFLADKFGKR 65 (77)
T ss_pred HHHHHHHHHHHHHhhhhHhhhhcCC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 3445677878889999999999886 344455566667777888888999999999986
No 262
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=85.71 E-value=1.2 Score=46.10 Aligned_cols=135 Identities=15% Similarity=0.161 Sum_probs=97.6
Q ss_pred HHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhH
Q 007702 54 ATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNT 133 (592)
Q Consensus 54 ~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~ 133 (592)
+.+.-.+.=.+.|..--||++++-.+..++..++..+.++++.+=+.-++-|...+.. .+.++|+-+..+++++-+..+
T Consensus 55 YLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaE-IAYysYIYs~Vd~~~Yqrvt~ 133 (433)
T KOG3810|consen 55 YLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAE-IAYYSYIYSKVDPEMYKRVTG 133 (433)
T ss_pred HHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHH-HhhhheeeeecCHHHHHHHHH
Confidence 3444455557899999999999999999999999999999998888888888766544 456788888899999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhccCChhHH
Q 007702 134 LPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWL 190 (592)
Q Consensus 134 ~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP~~l 190 (592)
..-...-.|.+.+.+..-.+...+..++...=.+... +..+..+..+++|..||-+
T Consensus 134 y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~-~~~ia~~~A~fLP~v~rSl 189 (433)
T KOG3810|consen 134 YCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLA-EVTIAVLLALFLPRVKRSL 189 (433)
T ss_pred HhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHH-HHHHHHHHHhhCCCCchhh
Confidence 9888888888888666555544444455544433333 2233444567777766443
No 263
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=85.41 E-value=5.9 Score=43.07 Aligned_cols=108 Identities=18% Similarity=0.090 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHHHHHhhHHhhhhhcCch--HHHHHHH--HHHHHHHHHHHhh---------ccHHHHHHHHHHHHhhh
Q 007702 42 VEGLVVAMSLIGATAITTCSGPISDWLGRR--PMLILSS--VLYFVSGLVMLWS---------PNVYVLCIARLLDGFGV 108 (592)
Q Consensus 42 ~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK--~~li~~~--~l~~i~~~~~~~s---------~~~~~ll~~R~l~G~~~ 108 (592)
..-+...++++|-.+|-.+..+.. .-.+| ..++.+. ++++...+++..- ++-+..++.-++.|+..
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltn 386 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSN 386 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhh
Confidence 445667788888888887654431 11223 3332221 1222222333221 35566677789999999
Q ss_pred hhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHH
Q 007702 109 GLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV 150 (592)
Q Consensus 109 g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~ 150 (592)
|...+.+..+..+..++++|..+..+..++..+|..+|....
T Consensus 387 Gy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 387 GYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988888888888775443
No 264
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=83.56 E-value=71 Score=34.67 Aligned_cols=73 Identities=15% Similarity=0.117 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc-hHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHH
Q 007702 9 IAATIGNFLQGWDNATIAGAIVYIKKDLNLGT-TVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLY 81 (592)
Q Consensus 9 ~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~-~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~ 81 (592)
..++.+.++..+..-+...+.+.+..+...++ -..+...-+-.+..++..+..|...||..|.+++..+.+..
T Consensus 5 ~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Q 78 (432)
T PF06963_consen 5 WRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQ 78 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHH
Confidence 45667778888888888887777666654322 22333333344556677778889999999999988776654
No 265
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=82.72 E-value=39 Score=36.19 Aligned_cols=106 Identities=11% Similarity=-0.059 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHH---HHHHHHHHhh-----
Q 007702 20 WDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLY---FVSGLVMLWS----- 91 (592)
Q Consensus 20 ~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~---~i~~~~~~~s----- 91 (592)
+.+..+..+.+++.+.+.-... .......+.+.+.+..++...+--+..-|....++..++ ++..+.+.++
T Consensus 32 lpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~~~il~i~~l~~~~v~~~ 110 (406)
T KOG1479|consen 32 LPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSLIAILFIVTLDLALVKTD 110 (406)
T ss_pred cchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 3455555667788877765444 444445555555555544444444333222222222222 1111222221
Q ss_pred ----ccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccc
Q 007702 92 ----PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEI 127 (592)
Q Consensus 92 ----~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~ 127 (592)
..+...++.-.+.+++.|......+...++ +|++.
T Consensus 111 ~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~y 149 (406)
T KOG1479|consen 111 TWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEY 149 (406)
T ss_pred CccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHH
Confidence 234555566667777777666555555544 45554
No 266
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=82.45 E-value=23 Score=38.98 Aligned_cols=97 Identities=16% Similarity=0.123 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHHHHHhhHHhhhhhcCch--HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 007702 42 VEGLVVAMSLIGATAITTCSGPISDWLGRR--PMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYI 119 (592)
Q Consensus 42 ~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK--~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i 119 (592)
.-|.+-++..+..++.++..|++-.++.|- ..+-+.+++.+..-+++.+++|.|...++-++-+.......+++..-+
T Consensus 299 yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~i 378 (511)
T TIGR00806 299 YNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQI 378 (511)
T ss_pred cCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777888888999999997766442 333344444555567777889999999999999988888888888888
Q ss_pred HhhcCccccchhhHHHHHH
Q 007702 120 SETAPSEIRGRLNTLPQFT 138 (592)
Q Consensus 120 ~E~~p~~~Rg~~~~~~~~~ 138 (592)
+.....+.-|...|+..+.
T Consensus 379 A~~L~~~~~aLvFGiNtfv 397 (511)
T TIGR00806 379 ASSLSKELCALVFGINTFV 397 (511)
T ss_pred HHHhcccceEEEEecHHHH
Confidence 8887777778877775543
No 267
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=81.79 E-value=22 Score=30.33 Aligned_cols=46 Identities=20% Similarity=0.309 Sum_probs=33.7
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHH
Q 007702 41 TVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGL 86 (592)
Q Consensus 41 ~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~ 86 (592)
...+.......++..++..+.+.+.|..|.+..+.+..++..++.+
T Consensus 87 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (141)
T TIGR00880 87 VALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFI 132 (141)
T ss_pred HHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHH
Confidence 4556677778888888889999999888887777666555544433
No 268
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=80.46 E-value=5.9 Score=43.28 Aligned_cols=144 Identities=15% Similarity=0.144 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCchHHHHHHHH---HHHHHHHHHhhHHhhhhhcCchHHHHHH------H
Q 007702 10 AATIGNFLQGWDNATIAGAIVYIKKD--LNLGTTVEGLVVAM---SLIGATAITTCSGPISDWLGRRPMLILS------S 78 (592)
Q Consensus 10 ~~~l~~~~~g~~~~~~~~~~~~i~~~--~~~s~~~~gli~s~---~~lg~~ig~~~~G~l~Dr~GRK~~li~~------~ 78 (592)
.+.+-++++|...+...+..|.+.++ -+.+.++.+.+.-+ |.+=..-..++=.....|+||||.-++= .
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~ 83 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSGI 83 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHHHH
Confidence 45567889999988876788888877 66776665543321 2222222233333345589999986542 2
Q ss_pred HHHHHHHHH----------HHhh-------c--cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHH
Q 007702 79 VLYFVSGLV----------MLWS-------P--NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTG 139 (592)
Q Consensus 79 ~l~~i~~~~----------~~~s-------~--~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~ 139 (592)
.+..++.-+ -.+. + +...+.+.-++.=+..+--..++=.+.-.+..++.++.+.+...++.
T Consensus 84 ~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~ 163 (544)
T PF13000_consen 84 LMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTVGQ 163 (544)
T ss_pred HHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHhHh
Confidence 222222222 0000 0 01111122211111111111222234445667888888888888888
Q ss_pred hhHHHHHHHHHHHh
Q 007702 140 SGGMFLAYCMVFGM 153 (592)
Q Consensus 140 ~~G~~l~~~~~~~~ 153 (592)
+.|.++++.....+
T Consensus 164 ~~Gyfls~tvFlal 177 (544)
T PF13000_consen 164 TAGYFLSFTVFLAL 177 (544)
T ss_pred hhhHHHHHHHHHhh
Confidence 88888886655443
No 269
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=79.14 E-value=6.9 Score=42.34 Aligned_cols=104 Identities=16% Similarity=0.124 Sum_probs=59.2
Q ss_pred HHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhc-------CchHHHHHHHHHHHHHHHHHHh-----hccHHHHHHH
Q 007702 33 KKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL-------GRRPMLILSSVLYFVSGLVMLW-----SPNVYVLCIA 100 (592)
Q Consensus 33 ~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~-------GRK~~li~~~~l~~i~~~~~~~-----s~~~~~ll~~ 100 (592)
.+--+.+....-++..++..+..+|.+++|.++|++ +|.++=.+.+.+.+..++.+.+ ..+...+.+.
T Consensus 275 ~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~i 354 (493)
T KOG1330|consen 275 YELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLI 354 (493)
T ss_pred HHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHH
Confidence 333344555666777888889999999999999983 3333333333322222222111 2233334444
Q ss_pred HHHHHhhhhhhh-hHHHHHHHhhcCccccchhhHHHH
Q 007702 101 RLLDGFGVGLAV-TLVPLYISETAPSEIRGRLNTLPQ 136 (592)
Q Consensus 101 R~l~G~~~g~~~-~~~~~~i~E~~p~~~Rg~~~~~~~ 136 (592)
-++.|....... +...-...|+.|++.|..+.++-.
T Consensus 355 l~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~ 391 (493)
T KOG1330|consen 355 LFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDT 391 (493)
T ss_pred HHHHHHHHHhcccccccceeeEecCcccccHHHHHHH
Confidence 455555443332 233345688999999988777643
No 270
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=78.87 E-value=1.1e+02 Score=33.82 Aligned_cols=101 Identities=12% Similarity=0.141 Sum_probs=64.0
Q ss_pred HHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhh---------ccH----------------------HHHHHHH
Q 007702 53 GATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS---------PNV----------------------YVLCIAR 101 (592)
Q Consensus 53 g~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s---------~~~----------------------~~ll~~R 101 (592)
++++...+...++++++|.+++-+....+....+++++. ++. |.+.+.-
T Consensus 71 ~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfY 150 (491)
T PF03219_consen 71 VAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFY 150 (491)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 445556778899999999998887777666655555441 111 1111111
Q ss_pred HHHHhhhhhhhh-HHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHh
Q 007702 102 LLDGFGVGLAVT-LVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (592)
Q Consensus 102 ~l~G~~~g~~~~-~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~ 153 (592)
++.-+-.....+ .-+.+..|+++.++-.+.-++..++.++|.+++.......
T Consensus 151 v~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~ 203 (491)
T PF03219_consen 151 VMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYF 203 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222222222 3467889999999989999999999999888775444433
No 271
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=77.53 E-value=59 Score=35.01 Aligned_cols=96 Identities=17% Similarity=0.090 Sum_probs=69.0
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHH--HHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHH
Q 007702 41 TVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLIL--SSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLY 118 (592)
Q Consensus 41 ~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~--~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~ 118 (592)
.--|.+-++..+.++++++..|++..++.+-.-+.+ ..++.+...+++.++++.|...++-++.+...-...+++..-
T Consensus 285 vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~q 364 (412)
T PF01770_consen 285 VYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQ 364 (412)
T ss_pred ccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456888888888899999999999777766444443 344455566777888999999888888887777777777666
Q ss_pred HHhhcCccccchhhHHHH
Q 007702 119 ISETAPSEIRGRLNTLPQ 136 (592)
Q Consensus 119 i~E~~p~~~Rg~~~~~~~ 136 (592)
++.....+.-|...|+..
T Consensus 365 IA~~l~~e~yaLVFGiNt 382 (412)
T PF01770_consen 365 IAKNLSEERYALVFGINT 382 (412)
T ss_pred HHHhccccceeeeeeeHH
Confidence 666666665565555533
No 272
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=76.46 E-value=7.6 Score=42.56 Aligned_cols=63 Identities=11% Similarity=0.042 Sum_probs=45.7
Q ss_pred HHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHH
Q 007702 101 RLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLML 165 (592)
Q Consensus 101 R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f 165 (592)
-++.|.+.........++-+|+..|+.++...+.++....++..++++....... ..|.|+..
T Consensus 395 i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~--~~g~~~v~ 457 (488)
T KOG2325|consen 395 IVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFT--LSGPRPVW 457 (488)
T ss_pred hheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHH--hcCccHHH
Confidence 3456666655566677888999999999999999999999999999655444433 33444443
No 273
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=76.11 E-value=8.8 Score=41.46 Aligned_cols=75 Identities=15% Similarity=-0.019 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHH
Q 007702 43 EGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPL 117 (592)
Q Consensus 43 ~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~ 117 (592)
-.|-..++.+...+.+...-.+++|+|-|+.++.+...+.++..+.+..++.+.....|-..|+-.+....+-+.
T Consensus 334 G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~ 408 (498)
T KOG0637|consen 334 GCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYG 408 (498)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHH
Confidence 344555666667778888999999999777788787778888888888899888888998888655554443333
No 274
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=75.01 E-value=75 Score=34.56 Aligned_cols=34 Identities=12% Similarity=-0.026 Sum_probs=24.0
Q ss_pred cHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccc
Q 007702 93 NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEI 127 (592)
Q Consensus 93 ~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~ 127 (592)
.++..++.-++.|++.+........+.+ .+|++.
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~~ 138 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPSTY 138 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHHH
Confidence 4566667778888888888777776666 566553
No 275
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=71.60 E-value=53 Score=33.25 Aligned_cols=132 Identities=15% Similarity=0.107 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHHHHHhhHHhhhhhcCch--HHHHHHHHHHHHHHHHHHh----hc---cHHHHHHHHHHHHhhhhhhh
Q 007702 42 VEGLVVAMSLIGATAITTCSGPISDWLGRR--PMLILSSVLYFVSGLVMLW----SP---NVYVLCIARLLDGFGVGLAV 112 (592)
Q Consensus 42 ~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK--~~li~~~~l~~i~~~~~~~----s~---~~~~ll~~R~l~G~~~g~~~ 112 (592)
--|.+.+.+++..++|+-+...+..|-..| +.+.+..++.+....+... +| +...=+++-++.-.+.|..+
T Consensus 283 PhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfw 362 (454)
T KOG4332|consen 283 PHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFW 362 (454)
T ss_pred CchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcc
Confidence 358888999999999988887776654332 3444444443333222222 22 22223455566667889999
Q ss_pred hHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHhHhc--CCCchhHHHHHHHHHHHHHHH
Q 007702 113 TLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL--ASPSWRLMLGVLSIPALLYFA 177 (592)
Q Consensus 113 ~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~--~~~~Wr~~f~i~~i~~~~~~~ 177 (592)
|...-+-+...|.+.|...+.++-.-..+ +.. +.+.-... ...+-|.+|.+.++...+..+
T Consensus 363 PSimkmRsqyIPEearstimNfFRvPLni--fvC--lvLynlh~~~~p~~tr~mf~icS~~~~~a~i 425 (454)
T KOG4332|consen 363 PSIMKMRSQYIPEEARSTIMNFFRVPLNI--FVC--LVLYNLHVDAFPTTTRNMFGICSAFLFVASI 425 (454)
T ss_pred hHHHHHHHhhCCHHHHhhhhhheechhhH--hhh--hhheecccccCccccchhhhhhHHHHHHHHH
Confidence 99999999999999998877765433322 211 11111111 123567888877776655433
No 276
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=69.83 E-value=15 Score=37.82 Aligned_cols=140 Identities=16% Similarity=0.211 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCc-hHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHH------HHH
Q 007702 5 ALVAIAATIGNFLQGWDNATIAGAIVY-IKKDLNLGT-TVEGLVVAMSLIGATAITTCSGPISDWLGRRPM------LIL 76 (592)
Q Consensus 5 ~~~~~~~~l~~~~~g~~~~~~~~~~~~-i~~~~~~s~-~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~------li~ 76 (592)
....+=+++.++...+-+..+...+-+ =.+.+.++. .+.=|....|.+|..+.-- +-++=|-+. +-.
T Consensus 250 l~~MvPL~~VY~~EY~INQGl~ell~F~c~~g~sls~~sqYRwyqvlYQlGVFiSRS-----S~~~~~~p~l~~LailQ~ 324 (409)
T KOG3880|consen 250 LKYMVPLALVYFAEYFINQGLAELLLFPCSHGFSLSKDSQYRWYQVLYQLGVFISRS-----SINLFTMPYLWLLAILQF 324 (409)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhEEeccccCCccchhhcchhhheeeeeeEEEEec-----cceEEechHHHHHHHHHH
Confidence 334444455555555544444332211 023334433 3456777777777654321 112212221 112
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHH
Q 007702 77 SSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCM 149 (592)
Q Consensus 77 ~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~ 149 (592)
-.+++.+...+..+.|+++..++.-+.-|+-.|..+.-..--+.+-.+++.|-.+++.....-++|..++..+
T Consensus 325 vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~l 397 (409)
T KOG3880|consen 325 VNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLL 397 (409)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHH
Confidence 2333444555566789999999999999999999988888778888899999999999888888888887444
No 277
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=69.21 E-value=25 Score=37.59 Aligned_cols=108 Identities=15% Similarity=0.085 Sum_probs=74.7
Q ss_pred hHHHHHHHH-HHHHHHHHHhhHHhhhhhcCchHHHHHHHH-HHHHHHHHHH-------hhccHHHHHHHHHHHHhhhhhh
Q 007702 41 TVEGLVVAM-SLIGATAITTCSGPISDWLGRRPMLILSSV-LYFVSGLVML-------WSPNVYVLCIARLLDGFGVGLA 111 (592)
Q Consensus 41 ~~~gli~s~-~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~-l~~i~~~~~~-------~s~~~~~ll~~R~l~G~~~g~~ 111 (592)
...-+++.+ +++...+|.+.+.++-+. +||...+.+.+ +..+-.+.+. +-.+-+++++.-.+.|+..|-.
T Consensus 282 ~y~~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYl 360 (406)
T KOG1479|consen 282 WYALLLVFLSFNVFDLIGSILAALLTWP-DPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYL 360 (406)
T ss_pred hhHHHHHHHHhHHHHHhhhhhhhcccCC-CCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchH
Confidence 344455566 899999997777777665 34444333322 2222222211 1234566777888999999999
Q ss_pred hhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHH
Q 007702 112 VTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCM 149 (592)
Q Consensus 112 ~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~ 149 (592)
..+...+..+..|++++-.+..+..++...|..+|...
T Consensus 361 tsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~ 398 (406)
T KOG1479|consen 361 TSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLL 398 (406)
T ss_pred hhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 99999999999999999888888888888888777433
No 278
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=66.45 E-value=12 Score=38.52 Aligned_cols=137 Identities=17% Similarity=0.112 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhh
Q 007702 43 EGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISET 122 (592)
Q Consensus 43 ~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~ 122 (592)
.|.+.-.-.+-..+..+.+..+.||+---+=+.+..++.+.+.++.+++++.++-+++-.+..++.|.--..-..+.+ .
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss-~ 142 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSS-R 142 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhc-c
Confidence 344444445556666777778888764333345556677788888899999999999988888887765433332222 2
Q ss_pred cCcc-ccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHHHHHHHHhhccC
Q 007702 123 APSE-IRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPE 185 (592)
Q Consensus 123 ~p~~-~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~~pE 185 (592)
.|+. .-+.-. +.....++|......+......+-|..+.+...++++.++..++.+++
T Consensus 143 Y~~~~i~~WSS-----GTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~ 201 (409)
T KOG3880|consen 143 YPSIVIAGWSS-----GTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKS 201 (409)
T ss_pred CCCceeccccC-----CCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCC
Confidence 2221 111111 111122233222222222234567777777777776655444444443
No 279
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=65.02 E-value=2.5 Score=43.56 Aligned_cols=103 Identities=21% Similarity=0.106 Sum_probs=3.9
Q ss_pred HHHHHHHHHHHHHhhHHhhhhhc-CchHHHHHHH--HHHHHHHHHHH----------hhccHHHHHHHHHHHHhhhhhhh
Q 007702 46 VVAMSLIGATAITTCSGPISDWL-GRRPMLILSS--VLYFVSGLVML----------WSPNVYVLCIARLLDGFGVGLAV 112 (592)
Q Consensus 46 i~s~~~lg~~ig~~~~G~l~Dr~-GRK~~li~~~--~l~~i~~~~~~----------~s~~~~~ll~~R~l~G~~~g~~~ 112 (592)
...++++|-.+|-.+.++.--+. .+|+.++.+. ++++...+++. +-++-+..++.-++.|+..|...
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 45678888888888777642111 3444333221 11211112221 12344666777889999999999
Q ss_pred hHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHH
Q 007702 113 TLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYC 148 (592)
Q Consensus 113 ~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~ 148 (592)
+.+..+..+..++++|..+..+..++..+|..+|..
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ 302 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSV 302 (309)
T ss_dssp HHHH--------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988888888888888777643
No 280
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=64.17 E-value=2.2 Score=47.68 Aligned_cols=78 Identities=14% Similarity=0.103 Sum_probs=0.0
Q ss_pred ChHHHhh--h-chhHHHHHHHHHHHHHHhhcccchhhchHHHHHHcCchhhhhccCCCCchhHHHHHHHHHHHHhhhHhH
Q 007702 505 SWAALLE--A-GVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGV 581 (592)
Q Consensus 505 ~~~~l~~--~-~~~r~l~i~~~~~~~qQ~sGin~i~~Y~~~i~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 581 (592)
..+++++ + =.+.++.+...+...-+..+++.+..|.|+.+|+ ..++++..++++.+++.-....+++++
T Consensus 290 ~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~--------QF~~sas~A~~l~G~v~ip~~~~G~ll 361 (539)
T PF03137_consen 290 SIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLES--------QFGLSASQASLLTGIVSIPGAALGILL 361 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HhCCCHHHHHHHHhhhhcchhheehhe
Confidence 3455554 2 2344677777778888888899999999999986 234667777777777766677788889
Q ss_pred HHHHhhhcC
Q 007702 582 AMKLMDVAG 590 (592)
Q Consensus 582 a~~lvd~~G 590 (592)
+.+++.|+.
T Consensus 362 GG~ivkk~k 370 (539)
T PF03137_consen 362 GGYIVKKFK 370 (539)
T ss_dssp ---------
T ss_pred EEEEEEEec
Confidence 999998874
No 281
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=63.02 E-value=9.5 Score=43.81 Aligned_cols=66 Identities=18% Similarity=0.188 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhchHHHHHH-cCchhhhhccCCCCchhHHHHHHHHHHHHhhhHhHHHHHhhhc
Q 007702 515 KRALLVGVGIQILQQFSGINGVLYYTPQILEQ-AGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVA 589 (592)
Q Consensus 515 ~r~l~i~~~~~~~qQ~sGin~i~~Y~~~i~~~-~G~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~a~~lvd~~ 589 (592)
..++.+.+.+.-.-|...++...-|.|..+|+ .| +++..+.++++.+.-....++++++.+++.|+
T Consensus 390 ~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg---------~sas~An~l~G~i~vp~~~~Gi~lGG~iikkf 456 (735)
T KOG3626|consen 390 SNPIFMLVVLASVIESLAITGYITFLPKYLETQFG---------ISASLANILTGSIGVPAAAVGIFLGGLIIKKF 456 (735)
T ss_pred cCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcC---------CCHHHHHHHhhhhhhhhhhhhhhccceeeeee
Confidence 34677888888888999999999999999986 44 45555556666655555566777777777765
No 282
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=60.10 E-value=2e+02 Score=33.47 Aligned_cols=46 Identities=17% Similarity=0.184 Sum_probs=31.8
Q ss_pred cCchHHHHHHHHHHHHHHHHHHhhc-cHHHHHHHHHHHHhhhhhhhh
Q 007702 68 LGRRPMLILSSVLYFVSGLVMLWSP-NVYVLCIARLLDGFGVGLAVT 113 (592)
Q Consensus 68 ~GRK~~li~~~~l~~i~~~~~~~s~-~~~~ll~~R~l~G~~~g~~~~ 113 (592)
-||.+-++++.++++++++...+.. ..+.+..+-++.+|+.++...
T Consensus 54 ~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~mlga 100 (701)
T TIGR01667 54 TGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILLGA 100 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 4778889999999988888777654 445555556666666555443
No 283
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=58.22 E-value=88 Score=32.65 Aligned_cols=72 Identities=15% Similarity=0.158 Sum_probs=52.9
Q ss_pred HHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcC
Q 007702 52 IGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAP 124 (592)
Q Consensus 52 lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p 124 (592)
+..+..+++.+.+..++|-|+++.++...+...-.. -+-+.+..++-+-++.|++.+..+..--+|+++...
T Consensus 69 ~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~-Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 69 LSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAA-NLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-hcchhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 344566677778899999999999888777655332 234678888889999999999877666666665543
No 284
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=57.23 E-value=2.6e+02 Score=29.57 Aligned_cols=85 Identities=20% Similarity=0.199 Sum_probs=55.7
Q ss_pred CCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHH-----HHHHh----hccHHHHHHHHHHHHhh
Q 007702 37 NLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG-----LVMLW----SPNVYVLCIARLLDGFG 107 (592)
Q Consensus 37 ~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~-----~~~~~----s~~~~~ll~~R~l~G~~ 107 (592)
|-..-+.+++++.|.+...+|+..+-++.|.--.-+.+.+-.++..++. +-..| .++-+.+.+.-.+.|.-
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~L 118 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVL 118 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 3344678999999999999999998888775332222222222222211 11122 34667788888999999
Q ss_pred hhhhhhHHHHHHHh
Q 007702 108 VGLAVTLVPLYISE 121 (592)
Q Consensus 108 ~g~~~~~~~~~i~E 121 (592)
+|...|....++..
T Consensus 119 VG~EiPL~mrml~~ 132 (508)
T COG4262 119 VGAEIPLLMRMLQR 132 (508)
T ss_pred HhcchHHHHHHHHH
Confidence 99999988877654
No 285
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=56.95 E-value=1.8e+02 Score=33.69 Aligned_cols=44 Identities=11% Similarity=0.271 Sum_probs=30.0
Q ss_pred cCchHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHhhhhhh
Q 007702 68 LGRRPMLILSSVLYFVSGLVMLWS-PNVYVLCIARLLDGFGVGLA 111 (592)
Q Consensus 68 ~GRK~~li~~~~l~~i~~~~~~~s-~~~~~ll~~R~l~G~~~g~~ 111 (592)
-||.+-++++.+++.++++...+. +..+.+..+-++.+|+.++.
T Consensus 54 ~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ml 98 (704)
T TIGR01666 54 TGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIML 98 (704)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 478888888888888887777665 45555555555666655544
No 286
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=55.61 E-value=2.4e+02 Score=28.58 Aligned_cols=37 Identities=19% Similarity=0.270 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHhhhhhh
Q 007702 75 ILSSVLYFVSGLVMLW-SPNVYVLCIARLLDGFGVGLA 111 (592)
Q Consensus 75 i~~~~l~~i~~~~~~~-s~~~~~ll~~R~l~G~~~g~~ 111 (592)
+.+.+++++++++..+ .++.+.+.+.-++.+|+.++.
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml 40 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGML 40 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 3444444344444444 445555555556666655554
No 287
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=54.83 E-value=3e+02 Score=29.60 Aligned_cols=102 Identities=16% Similarity=0.079 Sum_probs=60.1
Q ss_pred HHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhh
Q 007702 32 IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLA 111 (592)
Q Consensus 32 i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~ 111 (592)
+.... ++..+...+++...+...+++++-+....+.-|=++.......+....+......++...+.+-++.|+.....
T Consensus 29 v~~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~i~~~~~~~~~~~~~~~~g~~i~~gl~~~ll 107 (415)
T TIGR00801 29 VGLAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAFVSPMIAIGSGLGIPAIMGALIATGLVYTLL 107 (415)
T ss_pred Hhccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 44555 88888999999999999999999988765432223333333233222222222334555555555566554443
Q ss_pred hhH----HHHHHHhhcCccccchhhHH
Q 007702 112 VTL----VPLYISETAPSEIRGRLNTL 134 (592)
Q Consensus 112 ~~~----~~~~i~E~~p~~~Rg~~~~~ 134 (592)
... ...++...+|+...+.....
T Consensus 108 ~~~~~~~~~~~i~~~~Pp~v~g~iv~~ 134 (415)
T TIGR00801 108 SLLIKKLGPRWLMKLFPPVVTGPVVML 134 (415)
T ss_pred HHHHHHhhHHHHHhcCCchhHHHhHHH
Confidence 322 22355888999887765443
No 288
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=52.76 E-value=1e+02 Score=32.58 Aligned_cols=96 Identities=19% Similarity=0.167 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHH--HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 007702 42 VEGLVVAMSLIGATAITTCSGPISDWLGRRPML--ILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYI 119 (592)
Q Consensus 42 ~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~l--i~~~~l~~i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~~~~~~i 119 (592)
.-|.+=++..+..+++.+..|++.-.+.|..-+ .++++..+...+++..+++.|...++-++-........+++..-+
T Consensus 272 yNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~i 351 (433)
T KOG3810|consen 272 YNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQI 351 (433)
T ss_pred hcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHH
Confidence 345566777788888999999998776665433 344444455556666778888888777777777777777777777
Q ss_pred HhhcCccccchhhHHHHH
Q 007702 120 SETAPSEIRGRLNTLPQF 137 (592)
Q Consensus 120 ~E~~p~~~Rg~~~~~~~~ 137 (592)
++....+.-|...|+..+
T Consensus 352 A~nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 352 ARNLSSELFGLVFGINTF 369 (433)
T ss_pred HHhhhhhhheeeeehHHH
Confidence 877777777877776543
No 289
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=46.17 E-value=4.5e+02 Score=29.06 Aligned_cols=125 Identities=11% Similarity=0.122 Sum_probs=79.0
Q ss_pred HHHHHHHcCCC---chHHHHHHHHHHH-HHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhh---------ccH-
Q 007702 29 IVYIKKDLNLG---TTVEGLVVAMSLI-GATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS---------PNV- 94 (592)
Q Consensus 29 ~~~i~~~~~~s---~~~~gli~s~~~l-g~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s---------~~~- 94 (592)
+-.++..+-++ +....++=+..-+ ++.+..++...+.+++-|.+++-+-+..+....+++++. +++
T Consensus 46 lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~ 125 (509)
T COG3202 46 LRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPE 125 (509)
T ss_pred HHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHH
Confidence 34456666554 3445555555555 667778889999999999999887777766666666541 110
Q ss_pred ----------------------HHHHHHHHHHHhhhhhhhh-HHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHH
Q 007702 95 ----------------------YVLCIARLLDGFGVGLAVT-LVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVF 151 (592)
Q Consensus 95 ----------------------~~ll~~R~l~G~~~g~~~~-~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~ 151 (592)
|...+.-++.=+-.....+ .-.....|++..++-.+..++..+..+++.+++.....
T Consensus 126 ~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~ 205 (509)
T COG3202 126 FSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTS 205 (509)
T ss_pred HHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222222222222 33466789999999999999999999999888855554
Q ss_pred Hh
Q 007702 152 GM 153 (592)
Q Consensus 152 ~~ 153 (592)
..
T Consensus 206 ~~ 207 (509)
T COG3202 206 WL 207 (509)
T ss_pred HH
Confidence 43
No 290
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=42.79 E-value=66 Score=27.48 Aligned_cols=30 Identities=17% Similarity=0.276 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHhhHHhhhhhc-CchHH
Q 007702 44 GLVVAMSLIGATAITTCSGPISDWL-GRRPM 73 (592)
Q Consensus 44 gli~s~~~lg~~ig~~~~G~l~Dr~-GRK~~ 73 (592)
..-.+.=+++.++.....||+.|+| |-+|.
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPw 75 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPW 75 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcH
Confidence 3344555566666666778999986 45543
No 291
>TIGR00930 2a30 K-Cl cotransporter.
Probab=38.56 E-value=8e+02 Score=29.75 Aligned_cols=13 Identities=31% Similarity=0.084 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHhC
Q 007702 196 MLEAKQVLQRLRG 208 (592)
Q Consensus 196 ~~ea~~~l~~l~~ 208 (592)
...|++.+.++..
T Consensus 554 ~~~a~~~ll~l~~ 566 (953)
T TIGR00930 554 YSLALYSLLRLEE 566 (953)
T ss_pred HHHHHHHHHhccC
Confidence 4556666666653
No 292
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=37.04 E-value=33 Score=34.36 Aligned_cols=57 Identities=9% Similarity=0.236 Sum_probs=39.2
Q ss_pred cccchhhHHHHHHHhhHHHHHHHHHHHh---HhcCCCchhHHHHHHHHHHHHHHHHHHhh
Q 007702 126 EIRGRLNTLPQFTGSGGMFLAYCMVFGM---SLLASPSWRLMLGVLSIPALLYFAFAVFF 182 (592)
Q Consensus 126 ~~Rg~~~~~~~~~~~~G~~l~~~~~~~~---~~~~~~~Wr~~f~i~~i~~~~~~~l~~~~ 182 (592)
++|+....+...+..+|.+++.++.... ......+|++++.+.+++.++.+++..++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5678888888889999998886664433 11223479999988887776655544443
No 293
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=32.56 E-value=4.5e+02 Score=25.14 Aligned_cols=18 Identities=22% Similarity=-0.007 Sum_probs=8.1
Q ss_pred CchhHHHHHHHHHHHHHH
Q 007702 159 PSWRLMLGVLSIPALLYF 176 (592)
Q Consensus 159 ~~Wr~~f~i~~i~~~~~~ 176 (592)
.+-+.+.++..+++++.+
T Consensus 174 inp~l~~~~~iiig~i~~ 191 (206)
T PF06570_consen 174 INPVLPPWVYIIIGVIAF 191 (206)
T ss_pred CCcCCCHHHHHHHHHHHH
Confidence 344444444445554433
No 294
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=31.45 E-value=5.6e+02 Score=26.00 Aligned_cols=54 Identities=19% Similarity=0.212 Sum_probs=30.7
Q ss_pred HHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHHHHHHHh
Q 007702 97 LCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (592)
Q Consensus 97 ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~~~~~~ 153 (592)
.-..|.+.|+-.=.+ ...+++++-++|.+.+ ...+--+..++|..++.++..+.
T Consensus 22 ~~~lr~~~g~~~vlf-~PGy~l~~~lfp~~~~--l~~~er~~ls~glSi~~~~~~g~ 75 (287)
T PF07760_consen 22 IPPLRVILGFPFVLF-LPGYALVAALFPRKHD--LDGIERLALSVGLSIAIVPLIGL 75 (287)
T ss_pred hhHHHHHHHHHHHHH-hccHHHHHHHccCcCC--CcHHHHHHHHHHHHHHHHHHHHH
Confidence 345677777655333 4567778888885443 33444455556655554444443
No 295
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=30.72 E-value=1.8e+02 Score=26.62 Aligned_cols=80 Identities=19% Similarity=0.216 Sum_probs=46.7
Q ss_pred hhhhhcCchHHHHHHHHHHHHHHHHHHh-----------hccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchh
Q 007702 63 PISDWLGRRPMLILSSVLYFVSGLVMLW-----------SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRL 131 (592)
Q Consensus 63 ~l~Dr~GRK~~li~~~~l~~i~~~~~~~-----------s~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~ 131 (592)
.++||.-||-.+..+ +..+++...+.. .|++..+++.-++.|+|. ..+.|..++-.-.++.-|.+
T Consensus 56 ~Vs~RM~rRm~~~~G-iP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSl 131 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVG-IPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSL 131 (153)
T ss_pred HHHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCc
Confidence 457787666544443 333333222221 245566666555555442 34456666767778888999
Q ss_pred hHHHHHHHhhHHHHH
Q 007702 132 NTLPQFTGSGGMFLA 146 (592)
Q Consensus 132 ~~~~~~~~~~G~~l~ 146 (592)
.|+-++-.+++-+.-
T Consensus 132 lG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 132 LGWEEFKRNWGRMWE 146 (153)
T ss_pred ccHHHHHHhHHHHHH
Confidence 998888777776543
No 296
>PF04833 COBRA: COBRA-like protein; InterPro: IPR006918 In Arabidopsis thaliana (Mouse-ear cress) members of the family are all extracellular glycosyl-phosphatidyl inositol-anchored proteins (GPI-linked) []. The type example of the family is COBRA (Q94KT8 from SWISSPROT) and the family is generally annotated as COBRA-like (COBL). COBRA is involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. It may act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface. Some members of this family are annotated as phytochelatin synthase, but these annotations are incorrect [].
Probab=30.68 E-value=26 Score=32.44 Aligned_cols=12 Identities=50% Similarity=1.736 Sum_probs=10.9
Q ss_pred ceeEEEeecccc
Q 007702 413 GWQLAWKWTERE 424 (592)
Q Consensus 413 ~~~l~~~~~~~~ 424 (592)
||.|.|.|.++|
T Consensus 20 gW~L~W~W~~~E 31 (169)
T PF04833_consen 20 GWNLGWTWAKKE 31 (169)
T ss_pred CceEeeEEcCCE
Confidence 899999999865
No 297
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=30.57 E-value=5.7e+02 Score=26.86 Aligned_cols=71 Identities=17% Similarity=0.261 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHH---HHHHHHHhhccHHHHHHHHHHHHhhhhhhhh
Q 007702 42 VEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF---VSGLVMLWSPNVYVLCIARLLDGFGVGLAVT 113 (592)
Q Consensus 42 ~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~---i~~~~~~~s~~~~~ll~~R~l~G~~~g~~~~ 113 (592)
+.|.+.....+...+ .++.+++...+|--+.+..++++.. --.+....+.|......+-++.|.-.|....
T Consensus 48 m~GI~~laP~la~~l-~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIv 121 (354)
T PF04346_consen 48 MAGIMALAPVLAAFL-SPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGATIV 121 (354)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcccEE
Confidence 445555555454444 4556788899999999999887753 3345566677777777676777766665433
No 298
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=30.47 E-value=5.6e+02 Score=25.53 Aligned_cols=7 Identities=29% Similarity=0.458 Sum_probs=5.1
Q ss_pred HHHhhcC
Q 007702 118 YISETAP 124 (592)
Q Consensus 118 ~i~E~~p 124 (592)
..+...|
T Consensus 56 ~~~k~lP 62 (249)
T PF10225_consen 56 QLSKLLP 62 (249)
T ss_pred HHHHHcc
Confidence 4678888
No 299
>COG3619 Predicted membrane protein [Function unknown]
Probab=30.43 E-value=5.3e+02 Score=25.31 Aligned_cols=67 Identities=15% Similarity=0.229 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCc
Q 007702 4 AALVAIAATIGNFLQGWDNATIAGAIVY--------IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGR 70 (592)
Q Consensus 4 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~--------i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GR 70 (592)
..+.++.+..+.+.+.+.....+..... +.-+..-.+...........+..++|......+..|..|
T Consensus 10 l~l~~lLa~~aGfvDa~~f~~~gg~F~s~~TGN~v~~gi~l~~~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 10 LRLGLLLALVAGFVDAFGFLHLGGVFVSFMTGNLVLLGIELAEGDAALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhcCchhhheeccHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3455566666666666655333322111 111222223444555556666666675555555555554
No 300
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=28.17 E-value=9.2e+02 Score=27.35 Aligned_cols=14 Identities=29% Similarity=0.489 Sum_probs=9.1
Q ss_pred HHHhhccCChhHHH
Q 007702 178 FAVFFLPESPRWLV 191 (592)
Q Consensus 178 l~~~~~pEsP~~l~ 191 (592)
...++.|.+|.+..
T Consensus 485 ~~~li~p~~~~~~~ 498 (650)
T PF04632_consen 485 VFRLIRPFSPEWRR 498 (650)
T ss_pred HHHHHCCCChhHHH
Confidence 34556788887753
No 301
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=27.82 E-value=96 Score=26.46 Aligned_cols=31 Identities=13% Similarity=0.202 Sum_probs=24.4
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHhhccCCh
Q 007702 157 ASPSWRLMLGVLSIPALLYFAFAVFFLPESP 187 (592)
Q Consensus 157 ~~~~Wr~~f~i~~i~~~~~~~l~~~~~pEsP 187 (592)
+..+|..++++...++++.+.+.+.+.|++.
T Consensus 55 d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 55 DWEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 3458999998887777777777788889874
No 302
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=27.16 E-value=8.7e+02 Score=26.71 Aligned_cols=71 Identities=11% Similarity=0.038 Sum_probs=43.7
Q ss_pred HHHHhhhhhhhhHHHHHHHhhcCc-cccchhhHHHHHHHhhHHHHHHHHHHHhHhcCCCchhHHHHHHHHHHHH
Q 007702 102 LLDGFGVGLAVTLVPLYISETAPS-EIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALL 174 (592)
Q Consensus 102 ~l~G~~~g~~~~~~~~~i~E~~p~-~~Rg~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~Wr~~f~i~~i~~~~ 174 (592)
++.|+.........-..+.|.+|. +.|...++..+...++..++. ..+........||.....+.-+..++
T Consensus 274 i~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~--~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 274 IAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTM--MLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 334445555555555677888884 567888887776665555443 22235566677999877655554443
No 303
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=26.23 E-value=3.3e+02 Score=31.37 Aligned_cols=53 Identities=15% Similarity=0.033 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHHHHHHHhhHHHHHH
Q 007702 95 YVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAY 147 (592)
Q Consensus 95 ~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~~~~~~~~G~~l~~ 147 (592)
++.+.--++.+.+-........-+...-+|++.|..+.++.....++|.++..
T Consensus 566 ~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~ 618 (654)
T TIGR00926 566 LWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVV 618 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445556665555555556667778999999999998888888888773
No 304
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=25.42 E-value=7.5e+02 Score=25.38 Aligned_cols=76 Identities=16% Similarity=0.228 Sum_probs=47.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhh---cCchHHHHHHH
Q 007702 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW---LGRRPMLILSS 78 (592)
Q Consensus 2 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr---~GRK~~li~~~ 78 (592)
+|+.+..+.+.+++++.=+..+..+..+..+...+|.-....++..+..... ++..-.++ ||.||.=+++.
T Consensus 21 ~r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~~------~a~r~~~~~~TfGy~R~eiLaa 94 (296)
T COG1230 21 ERRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAIK------LARRPATKRFTFGYKRLEILAA 94 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHHH------HhcCCCCCCCCccHhHHHHHHH
Confidence 5677778888888887777777777777778888887666555555443222 22222222 67777666555
Q ss_pred HHHHH
Q 007702 79 VLYFV 83 (592)
Q Consensus 79 ~l~~i 83 (592)
++.++
T Consensus 95 ~~nav 99 (296)
T COG1230 95 FLNAL 99 (296)
T ss_pred HHHHH
Confidence 55443
No 305
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=25.34 E-value=2.7e+02 Score=26.42 Aligned_cols=23 Identities=17% Similarity=0.179 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHhhHHhhhhhcCc
Q 007702 48 AMSLIGATAITTCSGPISDWLGR 70 (592)
Q Consensus 48 s~~~lg~~ig~~~~G~l~Dr~GR 70 (592)
.-|.++..+.+.+.|++.||.-+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 45778889999999999999875
No 306
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=25.01 E-value=9.3e+02 Score=26.32 Aligned_cols=125 Identities=13% Similarity=0.124 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHH
Q 007702 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLV 87 (592)
Q Consensus 8 ~~~~~l~~~~~g~~~~~~~~~~~~i~~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~ 87 (592)
.+.+.+-.++..|...+..|.+ +-..++++..+...+++...+.+.+++++--....+.|-|-....++-...++.++
T Consensus 18 ~~~lglQH~lamfg~~V~VPli--vg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i 95 (451)
T COG2233 18 LLLLGLQHLLAMFGATVLVPLL--VGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMI 95 (451)
T ss_pred HHHHHHHHHHHHHhcchHhhHH--hccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHH
Confidence 3444555555555544443322 56788999999999999999999999988766444445444444444444444433
Q ss_pred HHh-h--ccHHHHHHHHHHHHhhhhhhhhHHHHHHHhhcCccccchhhHH
Q 007702 88 MLW-S--PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTL 134 (592)
Q Consensus 88 ~~~-s--~~~~~ll~~R~l~G~~~g~~~~~~~~~i~E~~p~~~Rg~~~~~ 134 (592)
... . ......+.+-+..|+..-...+.....+..++||-.-|....+
T Consensus 96 ~~~~~~g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG~Vi~~ 145 (451)
T COG2233 96 AIGGTTGDGIAALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTGPVVLV 145 (451)
T ss_pred HHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeEeee
Confidence 333 3 2366676677777766655544444488899999888775554
No 307
>PRK03612 spermidine synthase; Provisional
Probab=22.41 E-value=7.8e+02 Score=27.41 Aligned_cols=19 Identities=21% Similarity=0.298 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 007702 72 PMLILSSVLYFVSGLVMLW 90 (592)
Q Consensus 72 ~~li~~~~l~~i~~~~~~~ 90 (592)
+++.+..+..++++++.++
T Consensus 149 ~ly~~ntlGa~~G~l~~~~ 167 (521)
T PRK03612 149 TVLAADYLGALVGGLAFPF 167 (521)
T ss_pred hhHhHHhHHHHHHHHHHHH
Confidence 3444555555555555444
No 308
>PRK07419 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Provisional
Probab=22.24 E-value=8.4e+02 Score=25.06 Aligned_cols=14 Identities=21% Similarity=0.216 Sum_probs=7.9
Q ss_pred HHHHhhcCccccch
Q 007702 117 LYISETAPSEIRGR 130 (592)
Q Consensus 117 ~~i~E~~p~~~Rg~ 130 (592)
.|...=+|-+.||.
T Consensus 134 ~YT~gP~~l~y~gL 147 (304)
T PRK07419 134 LYQGPPFRLGYQGL 147 (304)
T ss_pred eccCCCcccCCCCc
Confidence 34444456677775
No 309
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=21.51 E-value=6.4e+02 Score=26.77 Aligned_cols=96 Identities=14% Similarity=0.117 Sum_probs=44.3
Q ss_pred HHcCCCchHHHHHHHHHHHHHHHHHhhHHhhhhhcCchHHHHHHHHHHHHHHHHHHhh------ccHHHHHHHHHHHHhh
Q 007702 34 KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS------PNVYVLCIARLLDGFG 107 (592)
Q Consensus 34 ~~~~~s~~~~gli~s~~~lg~~ig~~~~G~l~Dr~GRK~~li~~~~l~~i~~~~~~~s------~~~~~ll~~R~l~G~~ 107 (592)
..+|. ..+...+.+...+.+.+++++-+. +.|.|..+.-+.-...++....... ..+...+.+-++.|+.
T Consensus 27 ~~~g~-~~~~~~li~at~l~sgi~Tllq~~---~~g~~lpl~~G~s~~~~~~~~~~~g~~~~~~~~~~~~~g~~~i~gi~ 102 (389)
T PF00860_consen 27 AAFGL-DADTAALISATFLVSGIATLLQGL---PAGHRLPLVPGPSFAFIFAFMIVIGMAESGGYGLQAALGAVLISGIL 102 (389)
T ss_dssp S------------HHHHHHHHHHHHHHHHH---HTTT-----EEE-GGGHHHHHGGG-----HHHHHHHHHHHHHHHHHH
T ss_pred hcccc-cchhhHHHHHHHHHHHHHHHHHHh---cCCCceecccccchhhhhhhhcccccccchhhchhhhhhHHHHHHHH
Confidence 33566 444447778888888999998888 7788888876655554443332222 3444555555555554
Q ss_pred hhhhhhHHH-HHHHhhcCccccchhhH
Q 007702 108 VGLAVTLVP-LYISETAPSEIRGRLNT 133 (592)
Q Consensus 108 ~g~~~~~~~-~~i~E~~p~~~Rg~~~~ 133 (592)
.-....... -.+.+++|+..++....
T Consensus 103 ~~~l~~~g~~~~l~~~~pp~v~g~v~~ 129 (389)
T PF00860_consen 103 FILLGLTGLRKRLRRLFPPVVKGAVVL 129 (389)
T ss_dssp HHHHHTT-SH-HHHHH--HHHHHHHHH
T ss_pred HHHHHHhchHHHHHHHhChhheEeeEe
Confidence 433322222 26778888877664443
No 310
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=21.36 E-value=1.8e+02 Score=28.98 Aligned_cols=57 Identities=25% Similarity=0.128 Sum_probs=38.9
Q ss_pred HHHHHhhccc-chhhchHHHHHHcCchhhhhccCCCCchhHHHHHHHHHHHHhhhHhHHHHHhhhcCCC
Q 007702 525 QILQQFSGIN-GVLYYTPQILEQAGVEVLLSNLGISSESASFLISAFTTFLMLPCIGVAMKLMDVAGRR 592 (592)
Q Consensus 525 ~~~qQ~sGin-~i~~Y~~~i~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~a~~lvd~~GRR 592 (592)
...|-.+|.+ ....|+|++-++.|. +++..-.++...++-..++ +++.++.|++|-|
T Consensus 9 ~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~----------sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~ 66 (250)
T PF06813_consen 9 IWVQLCSGTTYTFSAYSPQLKSRLGY----------SQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPW 66 (250)
T ss_pred HHHHHhcCcccchhhhhHHHHHHhCC----------CHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchH
Confidence 3456677764 466899998888876 4555555565555555544 6778899998854
No 311
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=20.23 E-value=9e+02 Score=24.39 Aligned_cols=72 Identities=18% Similarity=0.167 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHHhhHHhhhhhc-CchHHHH----HHHHHHHHHHHHHH-hhc----cHHHHHHHHHHHHhhhhhh
Q 007702 42 VEGLVVAMSLIGATAITTCSGPISDWL-GRRPMLI----LSSVLYFVSGLVML-WSP----NVYVLCIARLLDGFGVGLA 111 (592)
Q Consensus 42 ~~gli~s~~~lg~~ig~~~~G~l~Dr~-GRK~~li----~~~~l~~i~~~~~~-~s~----~~~~ll~~R~l~G~~~g~~ 111 (592)
......-++..|.++|.+..|+..... -||+.+. .+.++++++.++.. +.+ ++..+++.-++.|++.=+.
T Consensus 142 ~~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~Wgi 221 (267)
T PF07672_consen 142 IIPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGI 221 (267)
T ss_pred hhHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhh
Confidence 345566677777788888888888754 4555443 22333444443321 121 3566777777777765444
Q ss_pred hh
Q 007702 112 VT 113 (592)
Q Consensus 112 ~~ 113 (592)
.+
T Consensus 222 Q~ 223 (267)
T PF07672_consen 222 QG 223 (267)
T ss_pred hH
Confidence 33
Done!