Query 007703
Match_columns 592
No_of_seqs 227 out of 1359
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 08:23:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007703.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007703hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 9E-207 3E-211 1661.8 47.8 540 50-592 1-541 (555)
2 1pj3_A NAD-dependent malic enz 100.0 7E-206 3E-210 1658.8 47.3 541 50-592 3-546 (564)
3 1o0s_A NAD-ME, NAD-dependent m 100.0 5E-206 2E-210 1664.6 45.7 544 46-592 33-578 (605)
4 3nv9_A Malic enzyme; rossmann 100.0 4E-121 1E-125 976.9 31.2 382 129-583 56-449 (487)
5 2a9f_A Putative malic enzyme ( 100.0 6E-113 2E-117 903.8 17.2 362 121-564 23-391 (398)
6 1vl6_A Malate oxidoreductase; 100.0 2E-107 5E-112 860.9 22.3 354 121-560 27-388 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 2.9E-86 1E-90 710.0 26.5 384 122-588 22-420 (439)
8 3gvp_A Adenosylhomocysteinase 98.9 2.3E-08 8E-13 107.5 15.5 169 252-460 111-318 (435)
9 3h9u_A Adenosylhomocysteinase; 98.8 1.9E-08 6.4E-13 108.3 11.4 130 298-462 171-311 (436)
10 1x13_A NAD(P) transhydrogenase 98.2 1.8E-06 6.1E-11 91.4 7.5 219 166-450 26-295 (401)
11 3n58_A Adenosylhomocysteinase; 97.8 0.00044 1.5E-08 75.1 17.2 128 298-460 207-345 (464)
12 3ond_A Adenosylhomocysteinase; 97.7 7.4E-05 2.5E-09 81.6 9.8 132 298-463 225-366 (488)
13 1l7d_A Nicotinamide nucleotide 97.1 0.0055 1.9E-07 64.0 14.0 225 167-449 20-296 (384)
14 4dio_A NAD(P) transhydrogenase 96.9 0.00082 2.8E-08 71.8 6.1 110 328-456 187-322 (405)
15 3k92_A NAD-GDH, NAD-specific g 96.6 0.039 1.3E-06 59.4 15.6 178 253-450 126-329 (424)
16 3aoe_E Glutamate dehydrogenase 96.5 0.021 7E-07 61.4 13.2 186 253-462 123-332 (419)
17 4fcc_A Glutamate dehydrogenase 96.5 0.15 5.2E-06 55.2 19.6 183 252-450 140-354 (450)
18 3p2y_A Alanine dehydrogenase/p 96.4 0.003 1E-07 67.0 5.8 104 329-450 182-305 (381)
19 3d4o_A Dipicolinate synthase s 96.4 0.02 6.8E-07 57.4 11.3 121 310-460 134-255 (293)
20 1a4i_A Methylenetetrahydrofola 95.8 0.018 6.3E-07 59.4 8.1 96 309-449 143-239 (301)
21 3r3j_A Glutamate dehydrogenase 95.8 0.53 1.8E-05 51.1 19.5 190 253-462 145-368 (456)
22 3jyo_A Quinate/shikimate dehyd 95.7 0.02 6.9E-07 57.9 7.8 88 315-422 111-205 (283)
23 3l07_A Bifunctional protein fo 95.6 0.028 9.7E-07 57.5 8.4 83 311-431 141-224 (285)
24 3aog_A Glutamate dehydrogenase 95.6 0.18 6E-06 54.6 14.9 176 253-450 140-344 (440)
25 2yfq_A Padgh, NAD-GDH, NAD-spe 95.5 0.13 4.5E-06 55.2 13.6 178 253-450 116-326 (421)
26 2bma_A Glutamate dehydrogenase 95.3 0.28 9.6E-06 53.4 15.2 179 254-450 159-372 (470)
27 3p2o_A Bifunctional protein fo 95.2 0.047 1.6E-06 55.9 8.5 84 310-431 139-223 (285)
28 3tri_A Pyrroline-5-carboxylate 95.1 0.11 3.6E-06 51.9 10.6 98 331-451 3-102 (280)
29 3ngx_A Bifunctional protein fo 95.1 0.045 1.5E-06 55.9 8.0 81 310-430 131-212 (276)
30 1b0a_A Protein (fold bifunctio 95.0 0.041 1.4E-06 56.5 7.4 95 309-448 137-232 (288)
31 3don_A Shikimate dehydrogenase 94.9 0.027 9.4E-07 56.9 5.8 86 315-422 101-186 (277)
32 4a5o_A Bifunctional protein fo 94.9 0.059 2E-06 55.2 8.2 83 311-431 141-224 (286)
33 2egg_A AROE, shikimate 5-dehyd 94.8 0.023 7.8E-07 57.5 4.8 87 316-422 125-215 (297)
34 2tmg_A Protein (glutamate dehy 94.6 0.68 2.3E-05 49.6 15.9 178 254-450 115-319 (415)
35 4a26_A Putative C-1-tetrahydro 94.6 0.064 2.2E-06 55.3 7.7 86 308-431 142-230 (300)
36 1c1d_A L-phenylalanine dehydro 94.6 0.53 1.8E-05 49.4 14.8 168 254-454 91-269 (355)
37 4e12_A Diketoreductase; oxidor 94.5 0.074 2.5E-06 52.8 7.7 97 332-452 5-124 (283)
38 1v8b_A Adenosylhomocysteinase; 94.5 0.16 5.6E-06 55.3 11.0 124 305-462 234-357 (479)
39 1edz_A 5,10-methylenetetrahydr 94.5 0.031 1.1E-06 58.0 4.9 112 313-449 150-277 (320)
40 1v9l_A Glutamate dehydrogenase 94.4 0.3 1E-05 52.5 12.4 177 254-450 116-325 (421)
41 1bgv_A Glutamate dehydrogenase 94.1 1.2 4.1E-05 48.2 16.4 179 254-450 136-350 (449)
42 2rir_A Dipicolinate synthase, 94.0 0.15 5.3E-06 51.0 8.8 110 322-460 148-257 (300)
43 1gpj_A Glutamyl-tRNA reductase 93.8 0.34 1.1E-05 50.9 11.3 102 328-450 164-269 (404)
44 2c2x_A Methylenetetrahydrofola 93.7 0.13 4.5E-06 52.6 7.7 98 309-449 136-234 (281)
45 3oj0_A Glutr, glutamyl-tRNA re 93.6 0.031 1.1E-06 49.6 2.5 71 331-422 21-91 (144)
46 3d64_A Adenosylhomocysteinase; 93.4 0.17 5.9E-06 55.4 8.6 110 309-450 258-367 (494)
47 2dpo_A L-gulonate 3-dehydrogen 93.4 0.2 6.9E-06 51.4 8.6 195 331-581 6-226 (319)
48 1leh_A Leucine dehydrogenase; 93.3 0.12 4.1E-06 54.3 6.9 159 259-450 93-264 (364)
49 1pjc_A Protein (L-alanine dehy 93.1 0.17 5.8E-06 52.3 7.5 96 329-449 165-269 (361)
50 2o4c_A Erythronate-4-phosphate 93.0 0.71 2.4E-05 48.8 12.2 187 299-530 81-280 (380)
51 3fbt_A Chorismate mutase and s 93.0 0.14 4.8E-06 52.0 6.5 49 316-375 107-155 (282)
52 3tnl_A Shikimate dehydrogenase 92.9 0.16 5.5E-06 52.3 7.0 50 315-375 138-187 (315)
53 3o8q_A Shikimate 5-dehydrogena 92.8 0.15 5E-06 51.6 6.5 97 262-375 50-159 (281)
54 3t4e_A Quinate/shikimate dehyd 92.8 0.16 5.4E-06 52.3 6.8 49 316-375 133-181 (312)
55 1gtm_A Glutamate dehydrogenase 92.5 0.77 2.6E-05 49.1 11.8 114 254-379 115-250 (419)
56 3pwz_A Shikimate dehydrogenase 92.5 0.16 5.3E-06 51.1 6.1 98 262-375 44-153 (272)
57 3u62_A Shikimate dehydrogenase 92.3 0.088 3E-06 52.4 3.9 125 262-421 42-176 (253)
58 3tum_A Shikimate dehydrogenase 92.2 0.22 7.5E-06 50.1 6.8 48 316-374 110-157 (269)
59 1mld_A Malate dehydrogenase; o 92.2 0.48 1.7E-05 48.2 9.3 101 333-450 2-120 (314)
60 3mw9_A GDH 1, glutamate dehydr 92.1 0.66 2.3E-05 51.0 10.8 179 253-450 136-352 (501)
61 1hyh_A L-hicdh, L-2-hydroxyiso 92.1 0.19 6.5E-06 50.5 6.1 102 332-451 2-126 (309)
62 2ewd_A Lactate dehydrogenase,; 92.0 0.29 9.8E-06 49.5 7.4 98 332-451 5-125 (317)
63 2ekl_A D-3-phosphoglycerate de 92.0 1.2 4.1E-05 45.4 12.0 121 298-448 90-233 (313)
64 3u95_A Glycoside hydrolase, fa 92.0 0.26 9E-06 53.4 7.5 45 427-475 140-184 (477)
65 2d5c_A AROE, shikimate 5-dehyd 91.9 0.21 7.1E-06 48.9 6.1 81 316-422 102-182 (263)
66 3dtt_A NADP oxidoreductase; st 91.7 0.42 1.4E-05 46.3 7.9 109 325-450 13-127 (245)
67 1pzg_A LDH, lactate dehydrogen 91.7 0.28 9.6E-06 50.3 7.0 106 332-452 10-137 (331)
68 2eez_A Alanine dehydrogenase; 91.6 0.44 1.5E-05 49.3 8.5 97 328-449 163-268 (369)
69 1p77_A Shikimate 5-dehydrogena 91.4 0.22 7.5E-06 49.4 5.7 49 315-375 103-151 (272)
70 3ce6_A Adenosylhomocysteinase; 91.4 1.2 4.2E-05 48.6 12.0 107 323-461 266-373 (494)
71 3oet_A Erythronate-4-phosphate 91.3 0.93 3.2E-05 48.0 10.6 120 298-450 83-213 (381)
72 1nyt_A Shikimate 5-dehydrogena 91.1 0.34 1.2E-05 47.9 6.7 49 315-375 103-151 (271)
73 2gcg_A Glyoxylate reductase/hy 90.1 2 6.9E-05 43.8 11.6 140 279-448 80-247 (330)
74 2v6b_A L-LDH, L-lactate dehydr 90.1 0.15 5.1E-06 51.6 3.1 104 333-451 2-120 (304)
75 1ldn_A L-lactate dehydrogenase 90.1 0.38 1.3E-05 48.9 6.1 105 332-450 7-126 (316)
76 3fef_A Putative glucosidase LP 89.9 0.41 1.4E-05 51.7 6.5 106 329-450 3-149 (450)
77 2i6t_A Ubiquitin-conjugating e 89.8 0.64 2.2E-05 47.3 7.5 101 332-451 15-129 (303)
78 1lu9_A Methylene tetrahydromet 89.8 1.4 4.9E-05 43.5 9.9 81 281-375 64-152 (287)
79 2dbq_A Glyoxylate reductase; D 89.7 3.3 0.00011 42.4 12.9 93 326-448 145-241 (334)
80 1b8p_A Protein (malate dehydro 89.5 0.42 1.4E-05 48.8 6.0 111 332-450 6-136 (329)
81 2hk9_A Shikimate dehydrogenase 89.4 0.67 2.3E-05 45.9 7.2 84 316-422 114-197 (275)
82 1a5z_A L-lactate dehydrogenase 89.3 0.63 2.2E-05 47.2 7.0 99 333-452 2-121 (319)
83 2g1u_A Hypothetical protein TM 89.2 0.65 2.2E-05 41.5 6.3 37 327-375 15-51 (155)
84 1o6z_A MDH, malate dehydrogena 89.1 0.45 1.5E-05 48.1 5.8 103 333-450 2-122 (303)
85 2hjr_A Malate dehydrogenase; m 88.9 0.32 1.1E-05 49.8 4.6 128 332-477 15-160 (328)
86 3phh_A Shikimate dehydrogenase 88.7 1.9 6.4E-05 43.5 9.9 100 316-449 107-212 (269)
87 1obb_A Maltase, alpha-glucosid 88.6 0.61 2.1E-05 50.8 6.7 127 331-475 3-177 (480)
88 1t2d_A LDH-P, L-lactate dehydr 88.5 0.45 1.6E-05 48.7 5.3 102 332-452 5-131 (322)
89 4g2n_A D-isomer specific 2-hyd 88.3 2.6 8.9E-05 43.8 11.0 192 298-529 116-336 (345)
90 2zyd_A 6-phosphogluconate dehy 88.3 0.94 3.2E-05 48.9 7.9 103 328-450 12-116 (480)
91 3rui_A Ubiquitin-like modifier 88.1 0.49 1.7E-05 49.5 5.3 37 328-375 31-67 (340)
92 3ba1_A HPPR, hydroxyphenylpyru 88.1 2.6 8.8E-05 43.5 10.7 108 310-450 124-254 (333)
93 1wwk_A Phosphoglycerate dehydr 87.9 2.6 8.8E-05 42.8 10.4 108 310-448 103-233 (307)
94 4e21_A 6-phosphogluconate dehy 87.8 1.7 5.8E-05 45.2 9.2 97 329-450 20-118 (358)
95 3k5p_A D-3-phosphoglycerate de 87.7 3.6 0.00012 44.0 11.8 193 297-529 101-322 (416)
96 3d1l_A Putative NADP oxidoredu 87.6 0.45 1.5E-05 46.1 4.5 99 327-450 6-105 (266)
97 2ph5_A Homospermidine synthase 87.6 3 0.0001 45.6 11.3 98 331-448 13-115 (480)
98 1xdw_A NAD+-dependent (R)-2-hy 87.4 3.4 0.00012 42.3 11.1 137 279-448 73-235 (331)
99 3i83_A 2-dehydropantoate 2-red 87.4 0.78 2.7E-05 46.1 6.2 99 332-451 3-109 (320)
100 2zqz_A L-LDH, L-lactate dehydr 87.3 0.47 1.6E-05 48.8 4.6 106 331-450 9-128 (326)
101 3jtm_A Formate dehydrogenase, 87.3 3.4 0.00012 43.0 11.1 174 298-503 108-309 (351)
102 2vhw_A Alanine dehydrogenase; 87.3 0.54 1.9E-05 49.0 5.1 95 328-447 165-268 (377)
103 1guz_A Malate dehydrogenase; o 87.1 1.1 3.9E-05 45.1 7.3 100 333-450 2-121 (310)
104 2rcy_A Pyrroline carboxylate r 87.0 3 0.0001 39.9 9.9 93 331-452 4-96 (262)
105 2hmt_A YUAA protein; RCK, KTN, 86.9 0.43 1.5E-05 40.8 3.4 103 329-450 4-108 (144)
106 1ez4_A Lactate dehydrogenase; 86.7 0.58 2E-05 47.9 4.9 105 332-450 6-124 (318)
107 3h8v_A Ubiquitin-like modifier 86.6 0.71 2.4E-05 47.1 5.4 38 327-375 32-69 (292)
108 1nvt_A Shikimate 5'-dehydrogen 86.6 0.55 1.9E-05 46.7 4.6 49 314-375 111-159 (287)
109 1z82_A Glycerol-3-phosphate de 86.5 0.62 2.1E-05 47.0 4.9 95 331-452 14-116 (335)
110 2p4q_A 6-phosphogluconate dehy 86.4 1.2 3.9E-05 48.5 7.3 99 332-450 11-112 (497)
111 3lk7_A UDP-N-acetylmuramoylala 86.4 0.65 2.2E-05 49.2 5.3 121 328-487 6-126 (451)
112 2i99_A MU-crystallin homolog; 86.4 1.9 6.5E-05 43.5 8.4 114 316-457 122-237 (312)
113 3d0o_A L-LDH 1, L-lactate dehy 86.4 0.71 2.4E-05 47.0 5.3 107 330-450 5-126 (317)
114 3kkj_A Amine oxidase, flavin-c 86.1 0.66 2.3E-05 40.9 4.3 31 333-375 4-34 (336)
115 1npy_A Hypothetical shikimate 86.1 0.95 3.3E-05 45.3 6.0 48 316-375 105-152 (271)
116 1y6j_A L-lactate dehydrogenase 86.1 0.8 2.7E-05 46.7 5.5 98 332-450 8-126 (318)
117 3gt0_A Pyrroline-5-carboxylate 86.0 1.4 4.9E-05 42.3 7.1 99 332-451 3-101 (247)
118 4hy3_A Phosphoglycerate oxidor 86.0 2.4 8E-05 44.6 9.2 178 309-529 133-339 (365)
119 2d0i_A Dehydrogenase; structur 86.0 3.3 0.00011 42.4 10.1 91 327-448 142-236 (333)
120 1qp8_A Formate dehydrogenase; 85.9 7 0.00024 39.6 12.4 118 297-448 70-211 (303)
121 4dgs_A Dehydrogenase; structur 85.8 4 0.00014 42.3 10.7 120 310-462 130-273 (340)
122 1s6y_A 6-phospho-beta-glucosid 85.7 0.48 1.6E-05 51.0 3.8 127 332-473 8-175 (450)
123 1sc6_A PGDH, D-3-phosphoglycer 85.7 7.7 0.00026 41.0 13.0 120 297-448 90-234 (404)
124 2j6i_A Formate dehydrogenase; 85.7 3 0.0001 43.5 9.7 144 279-449 88-259 (364)
125 1omo_A Alanine dehydrogenase; 85.6 2.6 8.9E-05 42.9 9.1 112 316-458 112-229 (322)
126 4gsl_A Ubiquitin-like modifier 85.6 0.72 2.5E-05 51.8 5.2 37 328-375 323-359 (615)
127 1txg_A Glycerol-3-phosphate de 85.5 1.3 4.5E-05 43.9 6.6 94 333-450 2-107 (335)
128 3hdj_A Probable ornithine cycl 85.5 3.2 0.00011 42.4 9.7 101 330-460 120-227 (313)
129 2cuk_A Glycerate dehydrogenase 85.4 5.3 0.00018 40.6 11.2 117 298-449 87-231 (311)
130 1lld_A L-lactate dehydrogenase 85.3 0.58 2E-05 46.6 4.0 103 331-451 7-128 (319)
131 4huj_A Uncharacterized protein 84.9 0.88 3E-05 43.3 4.9 93 332-451 24-117 (220)
132 1smk_A Malate dehydrogenase, g 84.9 1.4 4.9E-05 44.9 6.8 104 332-450 9-128 (326)
133 1ks9_A KPA reductase;, 2-dehyd 84.8 1.5 5E-05 42.4 6.4 97 333-451 2-101 (291)
134 1jw9_B Molybdopterin biosynthe 84.4 0.79 2.7E-05 45.0 4.4 38 328-376 28-65 (249)
135 2raf_A Putative dinucleotide-b 84.2 2.2 7.5E-05 40.4 7.3 80 327-451 15-94 (209)
136 1u8x_X Maltose-6'-phosphate gl 84.0 0.77 2.6E-05 49.8 4.5 126 331-473 28-194 (472)
137 3vku_A L-LDH, L-lactate dehydr 84.0 0.97 3.3E-05 46.7 5.0 107 330-450 8-128 (326)
138 1ur5_A Malate dehydrogenase; o 83.9 1.4 4.9E-05 44.5 6.2 104 332-450 3-122 (309)
139 3k96_A Glycerol-3-phosphate de 83.9 2.8 9.7E-05 43.3 8.5 103 331-451 29-137 (356)
140 3evt_A Phosphoglycerate dehydr 83.8 2.6 8.9E-05 43.4 8.2 189 298-529 83-301 (324)
141 3vh1_A Ubiquitin-like modifier 83.8 0.86 2.9E-05 51.0 4.8 38 327-375 323-360 (598)
142 3gvi_A Malate dehydrogenase; N 83.8 1.5 5.1E-05 45.2 6.3 106 329-450 5-127 (324)
143 1pgj_A 6PGDH, 6-PGDH, 6-phosph 83.7 1.3 4.3E-05 47.8 6.0 98 333-450 3-106 (478)
144 1dxy_A D-2-hydroxyisocaproate 83.7 7.8 0.00027 39.7 11.6 120 298-449 90-235 (333)
145 1zud_1 Adenylyltransferase THI 83.6 0.65 2.2E-05 45.7 3.4 37 328-375 25-61 (251)
146 2pi1_A D-lactate dehydrogenase 83.1 5.4 0.00019 41.1 10.2 139 299-470 87-251 (334)
147 2yq5_A D-isomer specific 2-hyd 82.8 12 0.00041 38.8 12.7 121 298-450 92-239 (343)
148 1x7d_A Ornithine cyclodeaminas 82.8 2.9 9.9E-05 43.3 8.1 114 316-458 116-238 (350)
149 1j4a_A D-LDH, D-lactate dehydr 82.8 8.9 0.0003 39.2 11.6 123 297-450 91-238 (333)
150 1hdo_A Biliverdin IX beta redu 82.6 3.3 0.00011 37.2 7.4 98 331-447 3-111 (206)
151 3gvx_A Glycerate dehydrogenase 82.5 6.3 0.00022 39.9 10.3 176 310-530 85-282 (290)
152 1x0v_A GPD-C, GPDH-C, glycerol 82.5 2.8 9.4E-05 42.1 7.6 110 331-451 8-128 (354)
153 2d4a_B Malate dehydrogenase; a 82.4 1.2 4.2E-05 45.2 5.0 96 333-450 1-119 (308)
154 1oju_A MDH, malate dehydrogena 82.3 1.5 5.2E-05 44.5 5.6 104 333-450 2-121 (294)
155 3hg7_A D-isomer specific 2-hyd 82.2 2.6 8.9E-05 43.5 7.4 176 310-530 103-303 (324)
156 2xxj_A L-LDH, L-lactate dehydr 81.9 0.65 2.2E-05 47.2 2.7 104 332-450 1-119 (310)
157 3h5n_A MCCB protein; ubiquitin 81.6 1.1 3.7E-05 46.6 4.3 38 327-375 114-151 (353)
158 2w2k_A D-mandelate dehydrogena 81.3 9.4 0.00032 39.3 11.2 96 326-448 158-257 (348)
159 4gwg_A 6-phosphogluconate dehy 81.3 3.1 0.0001 45.3 7.9 99 332-450 5-106 (484)
160 1hyu_A AHPF, alkyl hydroperoxi 81.3 1.4 4.7E-05 47.5 5.1 98 262-374 135-243 (521)
161 2nac_A NAD-dependent formate d 81.2 5.8 0.0002 42.0 9.8 165 326-528 186-356 (393)
162 4fgw_A Glycerol-3-phosphate de 81.0 2.1 7E-05 45.5 6.3 97 332-438 35-142 (391)
163 2iz1_A 6-phosphogluconate dehy 80.9 3.5 0.00012 44.2 8.1 100 331-450 5-106 (474)
164 2g76_A 3-PGDH, D-3-phosphoglyc 80.8 6.3 0.00021 40.7 9.7 119 299-448 112-256 (335)
165 2pgd_A 6-phosphogluconate dehy 80.6 3.1 0.00011 44.7 7.6 99 332-450 3-104 (482)
166 2izz_A Pyrroline-5-carboxylate 80.4 3 0.0001 42.0 7.0 100 331-451 22-122 (322)
167 1gdh_A D-glycerate dehydrogena 80.2 6.4 0.00022 40.1 9.4 122 298-448 89-239 (320)
168 3nep_X Malate dehydrogenase; h 80.0 1.1 3.7E-05 46.0 3.6 104 333-450 2-121 (314)
169 3pp8_A Glyoxylate/hydroxypyruv 80.0 2.6 8.8E-05 43.2 6.4 191 298-529 86-301 (315)
170 3tl2_A Malate dehydrogenase; c 79.8 1.3 4.4E-05 45.4 4.1 107 329-450 6-130 (315)
171 2h78_A Hibadh, 3-hydroxyisobut 79.6 1.5 5.3E-05 43.2 4.5 32 332-375 4-35 (302)
172 1y8q_A Ubiquitin-like 1 activa 79.5 1.6 5.5E-05 45.1 4.7 37 328-375 33-69 (346)
173 3p7m_A Malate dehydrogenase; p 79.4 1.2 4.3E-05 45.6 3.9 106 330-450 4-125 (321)
174 4ina_A Saccharopine dehydrogen 79.3 2.3 7.9E-05 44.6 5.9 86 332-435 2-98 (405)
175 3ggo_A Prephenate dehydrogenas 79.1 4.1 0.00014 41.2 7.5 93 332-447 34-128 (314)
176 3pef_A 6-phosphogluconate dehy 79.0 2.3 7.8E-05 41.8 5.5 32 332-375 2-33 (287)
177 3vrd_B FCCB subunit, flavocyto 78.9 2.2 7.4E-05 43.3 5.4 35 331-375 2-36 (401)
178 3c24_A Putative oxidoreductase 78.6 3.3 0.00011 40.6 6.5 91 332-450 12-104 (286)
179 3doj_A AT3G25530, dehydrogenas 78.6 1.8 6.2E-05 43.3 4.7 35 329-375 19-53 (310)
180 3gg9_A D-3-phosphoglycerate de 78.6 7.1 0.00024 40.6 9.3 161 326-529 155-325 (352)
181 1yj8_A Glycerol-3-phosphate de 78.5 2.7 9.1E-05 43.1 6.0 108 332-451 22-145 (375)
182 1jay_A Coenzyme F420H2:NADP+ o 78.1 0.96 3.3E-05 42.0 2.3 94 333-451 2-101 (212)
183 3b1f_A Putative prephenate deh 78.0 3.3 0.00011 40.5 6.3 96 331-449 6-103 (290)
184 3hn2_A 2-dehydropantoate 2-red 78.0 4 0.00014 40.7 7.0 102 332-451 3-107 (312)
185 2x5o_A UDP-N-acetylmuramoylala 77.7 5.5 0.00019 41.9 8.3 111 328-474 2-112 (439)
186 3ip1_A Alcohol dehydrogenase, 77.7 8.6 0.00029 39.7 9.6 95 316-433 198-304 (404)
187 3qha_A Putative oxidoreductase 77.4 2.1 7.1E-05 42.6 4.7 33 331-375 15-47 (296)
188 2vns_A Metalloreductase steap3 77.4 1.9 6.4E-05 41.0 4.2 94 329-451 26-119 (215)
189 3pqe_A L-LDH, L-lactate dehydr 77.4 1.3 4.4E-05 45.7 3.3 106 331-450 5-125 (326)
190 3gpi_A NAD-dependent epimerase 77.3 1.8 6.1E-05 41.7 4.1 97 330-447 2-109 (286)
191 1y7t_A Malate dehydrogenase; N 77.3 1.5 5.1E-05 44.2 3.7 110 332-450 5-133 (327)
192 4egb_A DTDP-glucose 4,6-dehydr 77.2 6.8 0.00023 38.5 8.3 106 329-447 22-149 (346)
193 3i6i_A Putative leucoanthocyan 77.1 1.1 3.9E-05 44.6 2.7 102 328-444 7-117 (346)
194 4dll_A 2-hydroxy-3-oxopropiona 76.8 2 6.8E-05 43.3 4.4 34 330-375 30-63 (320)
195 1yb4_A Tartronic semialdehyde 76.6 3.4 0.00012 40.2 5.9 30 332-373 4-33 (295)
196 3pdu_A 3-hydroxyisobutyrate de 76.5 2 6.9E-05 42.2 4.3 32 332-375 2-33 (287)
197 2uyy_A N-PAC protein; long-cha 76.4 3.1 0.00011 41.2 5.7 32 332-375 31-62 (316)
198 3k6j_A Protein F01G10.3, confi 76.3 2.5 8.7E-05 45.7 5.3 36 487-522 232-267 (460)
199 1mx3_A CTBP1, C-terminal bindi 75.7 12 0.00041 38.7 10.1 209 278-528 88-333 (347)
200 4e5n_A Thermostable phosphite 75.3 8.8 0.0003 39.4 8.8 195 298-529 89-317 (330)
201 2g5c_A Prephenate dehydrogenas 74.9 4.9 0.00017 39.0 6.5 97 332-450 2-99 (281)
202 3e8x_A Putative NAD-dependent 74.9 5.4 0.00018 37.2 6.6 97 327-447 17-131 (236)
203 3l6d_A Putative oxidoreductase 74.4 3.4 0.00012 41.3 5.4 36 328-375 6-41 (306)
204 1up7_A 6-phospho-beta-glucosid 74.3 3.9 0.00013 43.5 6.1 124 332-473 3-164 (417)
205 3fi9_A Malate dehydrogenase; s 74.1 4.4 0.00015 42.1 6.3 107 329-450 6-129 (343)
206 3kb6_A D-lactate dehydrogenase 74.0 13 0.00044 38.3 9.7 111 326-471 136-252 (334)
207 3o38_A Short chain dehydrogena 73.9 3.5 0.00012 39.5 5.1 76 328-422 19-112 (266)
208 1bg6_A N-(1-D-carboxylethyl)-L 73.9 8.2 0.00028 38.4 8.0 94 332-448 5-110 (359)
209 2qrj_A Saccharopine dehydrogen 73.8 7.7 0.00026 41.3 8.1 71 331-433 214-289 (394)
210 2q1w_A Putative nucleotide sug 73.8 9 0.00031 37.8 8.2 104 328-447 18-137 (333)
211 1tt5_B Ubiquitin-activating en 73.4 2.2 7.4E-05 45.8 3.8 37 328-375 37-73 (434)
212 3cky_A 2-hydroxymethyl glutara 73.3 2.8 9.7E-05 41.0 4.4 32 332-375 5-36 (301)
213 3abi_A Putative uncharacterize 73.3 2.2 7.4E-05 43.7 3.7 89 332-448 17-109 (365)
214 3qsg_A NAD-binding phosphogluc 73.1 17 0.00058 36.4 10.1 34 331-375 24-57 (312)
215 3pdi_B Nitrogenase MOFE cofact 73.0 1.8 6.3E-05 46.4 3.2 182 159-420 177-384 (458)
216 1vpd_A Tartronate semialdehyde 72.8 2.3 8E-05 41.5 3.6 32 332-375 6-37 (299)
217 2pzm_A Putative nucleotide sug 72.4 7 0.00024 38.5 7.0 103 327-447 16-136 (330)
218 4hb9_A Similarities with proba 71.9 3.3 0.00011 41.2 4.5 32 332-375 2-33 (412)
219 3d1c_A Flavin-containing putat 71.7 3.4 0.00012 40.8 4.6 35 331-376 4-38 (369)
220 1hye_A L-lactate/malate dehydr 71.4 6.7 0.00023 39.6 6.7 102 333-450 2-125 (313)
221 3r6d_A NAD-dependent epimerase 71.0 2.5 8.7E-05 39.1 3.3 94 332-445 6-106 (221)
222 1y8q_B Anthracycline-, ubiquit 70.3 3.2 0.00011 46.9 4.4 37 328-375 14-50 (640)
223 2x0j_A Malate dehydrogenase; o 70.0 5.4 0.00018 40.6 5.7 104 333-450 2-121 (294)
224 4id9_A Short-chain dehydrogena 69.8 9.4 0.00032 37.5 7.3 97 327-447 15-126 (347)
225 3dhn_A NAD-dependent epimerase 69.3 5.7 0.00019 36.6 5.3 96 332-446 5-111 (227)
226 3fwz_A Inner membrane protein 69.2 2.3 7.8E-05 37.3 2.4 32 332-375 8-39 (140)
227 4aj2_A L-lactate dehydrogenase 69.0 2.3 7.9E-05 44.0 2.8 108 328-450 16-139 (331)
228 4a9w_A Monooxygenase; baeyer-v 69.0 3.8 0.00013 39.8 4.2 34 331-376 3-36 (357)
229 3vtz_A Glucose 1-dehydrogenase 68.8 13 0.00043 36.1 7.9 79 326-422 9-92 (269)
230 3m2p_A UDP-N-acetylglucosamine 68.5 13 0.00043 36.2 7.8 93 332-447 3-109 (311)
231 3fbs_A Oxidoreductase; structu 68.2 4.6 0.00016 38.3 4.5 32 332-375 3-34 (297)
232 2z2v_A Hypothetical protein PH 68.2 2.5 8.5E-05 43.9 2.8 120 330-479 15-137 (365)
233 3s2u_A UDP-N-acetylglucosamine 67.7 6.9 0.00024 39.8 5.9 40 404-448 85-124 (365)
234 1lss_A TRK system potassium up 67.4 5.7 0.0002 33.5 4.5 33 331-375 4-36 (140)
235 4ezb_A Uncharacterized conserv 66.9 5.9 0.0002 39.9 5.2 33 332-375 25-57 (317)
236 3ldh_A Lactate dehydrogenase; 66.9 2.5 8.5E-05 43.9 2.5 106 330-450 20-141 (330)
237 3ic5_A Putative saccharopine d 66.8 5.9 0.0002 32.4 4.3 83 331-435 5-91 (118)
238 2zbw_A Thioredoxin reductase; 66.5 5 0.00017 39.1 4.5 34 331-376 5-38 (335)
239 3f8d_A Thioredoxin reductase ( 66.5 5.2 0.00018 38.3 4.5 33 331-375 15-47 (323)
240 3hyw_A Sulfide-quinone reducta 66.5 4 0.00014 42.5 3.9 34 332-375 3-36 (430)
241 3nrc_A Enoyl-[acyl-carrier-pro 66.2 8.5 0.00029 37.4 6.0 79 328-423 23-115 (280)
242 4b4u_A Bifunctional protein fo 66.0 16 0.00055 37.7 8.2 84 310-431 158-242 (303)
243 2bka_A CC3, TAT-interacting pr 65.9 15 0.00051 34.1 7.4 102 329-447 16-132 (242)
244 3lzw_A Ferredoxin--NADP reduct 65.6 5.5 0.00019 38.4 4.5 33 331-375 7-39 (332)
245 2cvz_A Dehydrogenase, 3-hydrox 65.6 5.5 0.00019 38.5 4.5 30 333-375 3-32 (289)
246 3oz2_A Digeranylgeranylglycero 65.5 5.1 0.00018 39.4 4.3 31 333-375 6-36 (397)
247 2yjz_A Metalloreductase steap4 68.8 1.3 4.5E-05 42.0 0.0 92 329-450 17-108 (201)
248 1i36_A Conserved hypothetical 65.2 10 0.00036 36.2 6.4 30 333-374 2-31 (264)
249 2z1m_A GDP-D-mannose dehydrata 65.2 11 0.00039 36.6 6.7 77 330-422 2-86 (345)
250 2pv7_A T-protein [includes: ch 65.1 16 0.00053 36.3 7.8 32 332-375 22-54 (298)
251 3fg2_P Putative rubredoxin red 65.0 5.6 0.00019 40.7 4.7 36 332-377 2-37 (404)
252 3alj_A 2-methyl-3-hydroxypyrid 65.0 5.7 0.00019 40.0 4.7 38 328-377 8-45 (379)
253 3llv_A Exopolyphosphatase-rela 64.6 6.1 0.00021 34.1 4.2 34 330-375 5-38 (141)
254 1n2s_A DTDP-4-, DTDP-glucose o 64.5 6.8 0.00023 37.6 4.9 86 333-447 2-104 (299)
255 3itj_A Thioredoxin reductase 1 64.2 5 0.00017 38.8 3.9 33 331-375 22-54 (338)
256 2ywl_A Thioredoxin reductase r 64.1 6.7 0.00023 35.0 4.5 32 332-375 2-33 (180)
257 3klj_A NAD(FAD)-dependent dehy 64.1 6.4 0.00022 40.6 4.9 37 330-378 8-44 (385)
258 1ygy_A PGDH, D-3-phosphoglycer 64.1 17 0.00059 39.5 8.5 120 298-447 88-232 (529)
259 2q7v_A Thioredoxin reductase; 64.1 5.5 0.00019 38.8 4.3 33 331-375 8-40 (325)
260 3fpc_A NADP-dependent alcohol 64.1 6.3 0.00021 39.7 4.8 50 314-375 151-200 (352)
261 2nvu_B Maltose binding protein 63.4 5.2 0.00018 45.4 4.4 35 330-375 410-444 (805)
262 3h8l_A NADH oxidase; membrane 63.3 5.7 0.0002 40.5 4.3 36 332-376 2-37 (409)
263 4b8w_A GDP-L-fucose synthase; 62.9 9.9 0.00034 36.1 5.7 93 328-447 3-113 (319)
264 5mdh_A Malate dehydrogenase; o 62.8 2.9 9.8E-05 43.2 2.0 110 332-450 4-132 (333)
265 3lxd_A FAD-dependent pyridine 62.7 6.6 0.00023 40.3 4.7 38 330-377 8-45 (415)
266 2jae_A L-amino acid oxidase; o 62.6 6.1 0.00021 41.1 4.5 42 324-377 4-45 (489)
267 3dme_A Conserved exported prot 62.6 7 0.00024 38.1 4.7 33 331-375 4-36 (369)
268 1pqw_A Polyketide synthase; ro 62.5 18 0.00061 32.9 7.1 50 314-375 22-72 (198)
269 2dq4_A L-threonine 3-dehydroge 62.1 9.3 0.00032 38.3 5.6 93 308-420 143-240 (343)
270 3c85_A Putative glutathione-re 62.0 8 0.00028 35.0 4.7 37 328-375 36-72 (183)
271 1e6u_A GDP-fucose synthetase; 61.8 9 0.00031 37.1 5.3 87 331-447 3-107 (321)
272 1ryi_A Glycine oxidase; flavop 61.7 7.3 0.00025 38.7 4.7 35 331-377 17-51 (382)
273 3nix_A Flavoprotein/dehydrogen 61.6 9.3 0.00032 38.6 5.5 35 331-377 5-39 (421)
274 3r9u_A Thioredoxin reductase; 61.5 7.2 0.00025 37.2 4.5 33 331-375 4-37 (315)
275 3cty_A Thioredoxin reductase; 61.3 7.2 0.00025 37.9 4.5 33 331-375 16-48 (319)
276 1uzm_A 3-oxoacyl-[acyl-carrier 61.2 17 0.00059 34.5 7.0 78 326-422 10-92 (247)
277 3ek2_A Enoyl-(acyl-carrier-pro 61.0 7.6 0.00026 36.8 4.5 38 326-375 9-49 (271)
278 3ehe_A UDP-glucose 4-epimerase 61.0 26 0.0009 33.8 8.4 95 333-447 3-114 (313)
279 2x3n_A Probable FAD-dependent 60.9 7.2 0.00025 39.3 4.5 34 331-376 6-39 (399)
280 3ado_A Lambda-crystallin; L-gu 60.8 7.3 0.00025 40.1 4.6 32 331-374 6-37 (319)
281 2gf3_A MSOX, monomeric sarcosi 60.6 7.4 0.00025 38.6 4.5 35 332-378 4-38 (389)
282 1tt5_A APPBP1, amyloid protein 60.4 4.9 0.00017 44.2 3.4 38 327-375 28-65 (531)
283 2q0l_A TRXR, thioredoxin reduc 60.4 7.8 0.00027 37.3 4.5 33 332-375 2-34 (311)
284 1y56_B Sarcosine oxidase; dehy 60.4 7.2 0.00025 38.8 4.4 34 331-376 5-38 (382)
285 3ab1_A Ferredoxin--NADP reduct 60.3 8 0.00027 38.3 4.7 34 331-376 14-47 (360)
286 1id1_A Putative potassium chan 60.3 8.9 0.0003 33.8 4.5 34 330-375 2-35 (153)
287 2xdo_A TETX2 protein; tetracyc 60.3 7.2 0.00025 39.6 4.4 36 329-376 24-59 (398)
288 2vou_A 2,6-dihydroxypyridine h 60.3 8.6 0.00029 39.0 5.0 34 330-375 4-37 (397)
289 1trb_A Thioredoxin reductase; 60.3 5.6 0.00019 38.4 3.5 34 330-375 4-37 (320)
290 3c96_A Flavin-containing monoo 60.1 8.1 0.00028 39.4 4.8 35 331-376 4-38 (410)
291 2vdc_G Glutamate synthase [NAD 60.0 8.3 0.00028 40.9 5.0 34 330-375 121-154 (456)
292 3rp8_A Flavoprotein monooxygen 59.8 8 0.00027 39.2 4.7 36 329-376 21-56 (407)
293 2d8a_A PH0655, probable L-thre 59.8 8.9 0.00031 38.5 5.0 48 314-374 153-200 (348)
294 3k7m_X 6-hydroxy-L-nicotine ox 59.7 8.1 0.00028 39.2 4.7 32 333-376 3-34 (431)
295 2c20_A UDP-glucose 4-epimerase 59.7 16 0.00055 35.4 6.7 99 332-447 2-118 (330)
296 3cgv_A Geranylgeranyl reductas 59.7 7 0.00024 38.9 4.2 34 331-376 4-37 (397)
297 3e48_A Putative nucleoside-dip 59.7 14 0.00048 35.3 6.2 97 333-447 2-106 (289)
298 2ahr_A Putative pyrroline carb 59.7 6.2 0.00021 37.8 3.6 90 332-450 4-93 (259)
299 3enk_A UDP-glucose 4-epimerase 59.2 24 0.00082 34.4 7.8 97 331-447 5-129 (341)
300 1yvv_A Amine oxidase, flavin-c 59.2 7.7 0.00026 37.7 4.3 33 332-376 3-35 (336)
301 3axb_A Putative oxidoreductase 59.0 9.4 0.00032 39.2 5.1 37 327-374 19-55 (448)
302 1f0y_A HCDH, L-3-hydroxyacyl-C 58.8 8.4 0.00029 38.0 4.5 32 332-375 16-47 (302)
303 2gag_B Heterotetrameric sarcos 58.6 10 0.00034 37.9 5.1 36 331-376 21-56 (405)
304 3ef6_A Toluene 1,2-dioxygenase 58.5 8.7 0.0003 39.5 4.7 37 332-378 3-39 (410)
305 3gg2_A Sugar dehydrogenase, UD 58.2 8 0.00028 41.3 4.5 32 332-375 3-34 (450)
306 3tpc_A Short chain alcohol deh 58.2 23 0.0008 33.6 7.4 77 328-422 4-92 (257)
307 1zk7_A HGII, reductase, mercur 57.9 8.9 0.0003 40.0 4.7 33 331-375 4-36 (467)
308 2p5y_A UDP-glucose 4-epimerase 57.8 17 0.00057 35.2 6.4 98 333-447 2-117 (311)
309 4eqs_A Coenzyme A disulfide re 57.8 8.3 0.00028 40.3 4.5 34 333-376 2-35 (437)
310 2uzz_A N-methyl-L-tryptophan o 57.7 8.1 0.00028 38.2 4.2 35 332-378 3-37 (372)
311 3qy9_A DHPR, dihydrodipicolina 57.7 24 0.00081 34.8 7.5 21 332-352 4-24 (243)
312 2x4g_A Nucleoside-diphosphate- 57.3 22 0.00077 34.5 7.3 97 332-447 14-126 (342)
313 2o7s_A DHQ-SDH PR, bifunctiona 57.2 13 0.00043 40.4 5.9 36 328-375 361-396 (523)
314 4hv4_A UDP-N-acetylmuramate--L 57.1 8.9 0.0003 41.2 4.7 107 331-474 22-130 (494)
315 1vdc_A NTR, NADPH dependent th 56.8 8 0.00027 37.6 3.9 33 330-374 7-39 (333)
316 3dfz_A SIRC, precorrin-2 dehyd 56.8 8.2 0.00028 37.8 4.0 36 328-375 28-63 (223)
317 1c0p_A D-amino acid oxidase; a 56.7 11 0.00037 37.5 4.9 34 331-376 6-39 (363)
318 2yy7_A L-threonine dehydrogena 56.6 8.6 0.00029 37.0 4.1 98 332-446 3-117 (312)
319 2oln_A NIKD protein; flavoprot 56.5 9.3 0.00032 38.4 4.5 36 331-378 4-39 (397)
320 3hhp_A Malate dehydrogenase; M 56.5 12 0.0004 38.3 5.3 103 333-450 2-121 (312)
321 3dje_A Fructosyl amine: oxygen 56.4 9.5 0.00033 39.0 4.6 37 331-378 6-42 (438)
322 2c5a_A GDP-mannose-3', 5'-epim 56.4 35 0.0012 34.3 8.7 99 330-447 28-145 (379)
323 1k0i_A P-hydroxybenzoate hydro 56.4 10 0.00036 38.0 4.8 33 332-376 3-35 (394)
324 3ew7_A LMO0794 protein; Q8Y8U8 56.4 32 0.0011 31.1 7.7 91 333-447 2-103 (221)
325 3uog_A Alcohol dehydrogenase; 56.4 21 0.00072 36.1 7.1 44 319-374 178-221 (363)
326 2gv8_A Monooxygenase; FMO, FAD 56.1 8.6 0.00029 39.9 4.2 36 330-375 5-40 (447)
327 2gqw_A Ferredoxin reductase; f 56.0 12 0.0004 38.6 5.2 38 331-378 7-44 (408)
328 3cmm_A Ubiquitin-activating en 55.8 10 0.00034 45.0 5.2 37 328-375 24-60 (1015)
329 4ej6_A Putative zinc-binding d 55.6 24 0.00082 35.9 7.4 91 306-420 159-262 (370)
330 3grf_A Ornithine carbamoyltran 55.5 36 0.0012 35.3 8.7 136 263-417 91-240 (328)
331 3uox_A Otemo; baeyer-villiger 55.5 11 0.00038 40.9 5.2 35 330-376 8-42 (545)
332 2eq6_A Pyruvate dehydrogenase 55.4 9.2 0.00031 40.1 4.4 35 330-376 5-39 (464)
333 3sx6_A Sulfide-quinone reducta 55.3 10 0.00036 39.2 4.7 36 332-376 5-40 (437)
334 2r9z_A Glutathione amide reduc 55.3 10 0.00034 39.9 4.7 33 331-375 4-36 (463)
335 2xve_A Flavin-containing monoo 55.3 9.8 0.00034 40.1 4.6 38 332-375 3-40 (464)
336 4ep1_A Otcase, ornithine carba 55.3 56 0.0019 34.1 10.1 131 269-421 121-257 (340)
337 3iwa_A FAD-dependent pyridine 55.2 9.7 0.00033 39.8 4.5 37 331-377 3-39 (472)
338 1dxl_A Dihydrolipoamide dehydr 55.2 11 0.00039 39.1 5.0 33 331-375 6-38 (470)
339 2q1s_A Putative nucleotide sug 54.9 18 0.00063 36.2 6.4 103 328-447 29-151 (377)
340 2dkn_A 3-alpha-hydroxysteroid 54.7 14 0.00049 34.2 5.1 69 333-423 3-74 (255)
341 3urh_A Dihydrolipoyl dehydroge 54.6 10 0.00034 40.0 4.5 34 331-376 25-58 (491)
342 2hqm_A GR, grase, glutathione 54.6 9.8 0.00034 40.0 4.5 35 330-376 10-44 (479)
343 3ktd_A Prephenate dehydrogenas 54.5 21 0.00072 36.8 6.8 89 332-447 9-101 (341)
344 3r1i_A Short-chain type dehydr 54.4 30 0.001 33.7 7.6 78 327-422 28-120 (276)
345 4ap3_A Steroid monooxygenase; 54.3 10 0.00035 41.2 4.6 35 330-376 20-54 (549)
346 3n74_A 3-ketoacyl-(acyl-carrie 54.3 9.5 0.00033 36.2 3.9 78 327-422 5-94 (261)
347 3i3l_A Alkylhalidase CMLS; fla 54.2 15 0.00052 40.4 6.0 37 329-377 21-57 (591)
348 3sc6_A DTDP-4-dehydrorhamnose 54.2 8.3 0.00028 36.8 3.5 84 332-447 6-106 (287)
349 4gbj_A 6-phosphogluconate dehy 54.2 18 0.00063 36.1 6.2 31 332-374 6-36 (297)
350 3s5w_A L-ornithine 5-monooxyge 54.1 8.8 0.0003 39.6 3.9 39 331-377 30-69 (463)
351 2dtx_A Glucose 1-dehydrogenase 54.1 48 0.0016 31.8 8.9 76 328-422 5-85 (264)
352 3ijp_A DHPR, dihydrodipicolina 53.9 27 0.00091 35.6 7.3 92 332-445 22-118 (288)
353 3i1j_A Oxidoreductase, short c 53.9 26 0.00088 32.8 6.8 38 327-375 10-47 (247)
354 3ec7_A Putative dehydrogenase; 53.7 6.8 0.00023 39.9 3.0 88 329-434 21-108 (357)
355 1hdc_A 3-alpha, 20 beta-hydrox 53.7 13 0.00045 35.5 4.8 37 328-375 2-38 (254)
356 3tzq_B Short-chain type dehydr 53.7 12 0.00041 36.1 4.6 78 327-422 7-96 (271)
357 2cul_A Glucose-inhibited divis 53.6 11 0.00039 35.5 4.3 33 331-375 3-35 (232)
358 3m6i_A L-arabinitol 4-dehydrog 53.5 15 0.00052 36.9 5.5 58 305-374 155-212 (363)
359 3nrn_A Uncharacterized protein 53.5 12 0.00041 38.1 4.8 32 333-376 2-33 (421)
360 2wpf_A Trypanothione reductase 53.4 14 0.00049 39.2 5.5 32 331-373 7-38 (495)
361 3h28_A Sulfide-quinone reducta 53.3 11 0.00039 38.8 4.6 35 332-376 3-37 (430)
362 3ka7_A Oxidoreductase; structu 53.2 12 0.00041 37.8 4.7 32 333-376 2-33 (425)
363 3un1_A Probable oxidoreductase 53.0 33 0.0011 32.9 7.6 76 329-422 26-107 (260)
364 1tzb_A Glucose-6-phosphate iso 52.9 34 0.0012 34.1 7.9 64 331-435 37-101 (302)
365 1o5i_A 3-oxoacyl-(acyl carrier 52.7 43 0.0015 31.8 8.3 77 327-422 15-92 (249)
366 2qae_A Lipoamide, dihydrolipoy 52.7 12 0.0004 39.1 4.7 33 331-375 2-34 (468)
367 2zcu_A Uncharacterized oxidore 52.5 11 0.00037 35.8 4.0 98 333-447 1-104 (286)
368 1rsg_A FMS1 protein; FAD bindi 52.4 4.5 0.00015 42.9 1.4 25 329-353 6-30 (516)
369 1fl2_A Alkyl hydroperoxide red 52.3 11 0.00038 36.2 4.1 32 332-375 2-33 (310)
370 3k31_A Enoyl-(acyl-carrier-pro 52.3 17 0.00058 35.7 5.5 81 326-422 25-119 (296)
371 2yqu_A 2-oxoglutarate dehydrog 52.2 12 0.00041 38.9 4.6 33 332-376 2-34 (455)
372 3h7a_A Short chain dehydrogena 52.2 27 0.00092 33.4 6.8 77 328-422 4-94 (252)
373 3v76_A Flavoprotein; structura 52.2 11 0.00037 39.5 4.3 35 331-377 27-61 (417)
374 4gcm_A TRXR, thioredoxin reduc 52.2 12 0.00041 36.3 4.3 32 332-375 7-38 (312)
375 3uko_A Alcohol dehydrogenase c 52.1 25 0.00086 35.7 6.9 45 319-374 182-226 (378)
376 1sb8_A WBPP; epimerase, 4-epim 52.1 13 0.00045 36.7 4.7 101 329-447 25-153 (352)
377 3sxp_A ADP-L-glycero-D-mannohe 52.1 25 0.00084 34.9 6.7 108 327-447 6-138 (362)
378 3tpf_A Otcase, ornithine carba 52.0 90 0.0031 32.0 11.0 134 263-419 82-222 (307)
379 1mo9_A ORF3; nucleotide bindin 51.8 11 0.00038 40.2 4.4 35 330-376 42-76 (523)
380 1yqd_A Sinapyl alcohol dehydro 51.7 28 0.00095 35.3 7.1 49 314-374 171-219 (366)
381 3ruf_A WBGU; rossmann fold, UD 51.6 9.4 0.00032 37.6 3.5 101 329-447 23-151 (351)
382 4a2c_A Galactitol-1-phosphate 51.6 37 0.0013 33.7 7.9 55 308-374 139-193 (346)
383 3qvo_A NMRA family protein; st 51.5 17 0.00058 34.0 5.1 101 329-447 21-125 (236)
384 3k30_A Histamine dehydrogenase 51.4 14 0.00049 41.0 5.3 34 331-376 391-424 (690)
385 4g6h_A Rotenone-insensitive NA 51.3 6.4 0.00022 42.3 2.4 32 332-375 43-74 (502)
386 4gde_A UDP-galactopyranose mut 51.3 14 0.00048 38.2 4.9 23 331-353 10-32 (513)
387 1ges_A Glutathione reductase; 51.2 10 0.00036 39.5 4.0 33 331-375 4-36 (450)
388 1zmd_A Dihydrolipoyl dehydroge 51.1 12 0.00042 39.0 4.5 34 331-376 6-39 (474)
389 2a8x_A Dihydrolipoyl dehydroge 51.0 12 0.00041 39.0 4.4 33 331-375 3-35 (464)
390 2ew2_A 2-dehydropantoate 2-red 51.0 13 0.00046 35.9 4.5 99 332-451 4-112 (316)
391 1pl8_A Human sorbitol dehydrog 51.0 19 0.00066 36.2 5.8 49 314-374 156-204 (356)
392 2a87_A TRXR, TR, thioredoxin r 50.8 11 0.00037 37.1 3.8 34 330-375 13-46 (335)
393 4dry_A 3-oxoacyl-[acyl-carrier 50.6 13 0.00045 36.3 4.3 79 326-422 28-122 (281)
394 1w4x_A Phenylacetone monooxyge 50.6 15 0.0005 39.5 5.1 36 329-376 14-49 (542)
395 1m6i_A Programmed cell death p 50.5 15 0.00051 39.0 5.1 38 330-377 10-47 (493)
396 2zb4_A Prostaglandin reductase 50.5 26 0.00089 35.2 6.6 56 309-375 137-195 (357)
397 3dqp_A Oxidoreductase YLBE; al 50.4 27 0.00091 32.0 6.2 94 333-447 2-106 (219)
398 3p19_A BFPVVD8, putative blue 50.4 16 0.00055 35.4 4.9 82 326-422 11-98 (266)
399 3fys_A Protein DEGV; fatty aci 50.3 12 0.0004 38.5 4.1 153 157-365 16-178 (315)
400 1ebd_A E3BD, dihydrolipoamide 50.1 12 0.0004 39.0 4.1 32 332-375 4-35 (455)
401 3cgb_A Pyridine nucleotide-dis 50.0 11 0.00038 39.7 3.9 63 306-378 8-73 (480)
402 1rkx_A CDP-glucose-4,6-dehydra 50.0 26 0.0009 34.5 6.5 102 329-447 7-132 (357)
403 2nu8_A Succinyl-COA ligase [AD 49.8 31 0.0011 34.5 7.0 86 331-443 7-93 (288)
404 3ntd_A FAD-dependent pyridine 49.8 16 0.00056 38.8 5.3 36 332-377 2-37 (565)
405 3e03_A Short chain dehydrogena 49.7 48 0.0017 31.9 8.2 37 328-375 3-39 (274)
406 1onf_A GR, grase, glutathione 49.5 13 0.00043 39.5 4.3 33 332-376 3-35 (500)
407 2qa2_A CABE, polyketide oxygen 49.5 14 0.00048 39.4 4.7 34 330-375 11-44 (499)
408 2e4g_A Tryptophan halogenase; 49.5 13 0.00044 40.0 4.4 38 331-377 25-62 (550)
409 2weu_A Tryptophan 5-halogenase 49.4 10 0.00036 39.8 3.6 37 332-377 3-39 (511)
410 1xq6_A Unknown protein; struct 49.3 18 0.00061 33.3 4.8 101 329-447 2-133 (253)
411 4eez_A Alcohol dehydrogenase 1 49.3 37 0.0013 33.7 7.5 47 316-374 150-196 (348)
412 2aqj_A Tryptophan halogenase, 49.3 14 0.00047 39.5 4.5 37 331-376 5-41 (538)
413 3mz0_A Inositol 2-dehydrogenas 49.2 7.9 0.00027 38.9 2.6 86 332-435 3-88 (344)
414 4a5l_A Thioredoxin reductase; 49.2 12 0.00043 35.8 3.9 32 332-375 5-36 (314)
415 2qcu_A Aerobic glycerol-3-phos 49.1 14 0.00047 39.2 4.5 34 331-376 3-36 (501)
416 3l8k_A Dihydrolipoyl dehydroge 49.1 15 0.00051 38.4 4.7 34 331-376 4-37 (466)
417 3gwf_A Cyclohexanone monooxyge 49.0 11 0.00039 40.8 3.9 36 330-376 7-42 (540)
418 3o0h_A Glutathione reductase; 49.0 15 0.00053 38.5 4.8 33 331-375 26-58 (484)
419 1lvl_A Dihydrolipoamide dehydr 49.0 13 0.00046 38.8 4.3 33 331-375 5-37 (458)
420 4gqa_A NAD binding oxidoreduct 48.8 24 0.00082 36.3 6.2 103 319-435 13-119 (412)
421 1kyq_A Met8P, siroheme biosynt 48.7 10 0.00035 38.3 3.2 36 328-375 10-45 (274)
422 1q1r_A Putidaredoxin reductase 48.7 16 0.00055 37.9 4.9 37 331-377 4-40 (431)
423 4b63_A L-ornithine N5 monooxyg 48.6 10 0.00035 40.5 3.5 42 334-375 42-85 (501)
424 3oig_A Enoyl-[acyl-carrier-pro 48.6 26 0.00089 33.3 6.0 79 328-422 4-98 (266)
425 1dlj_A UDP-glucose dehydrogena 48.5 15 0.00051 38.3 4.6 30 333-375 2-31 (402)
426 2q2v_A Beta-D-hydroxybutyrate 48.4 13 0.00046 35.3 3.9 37 328-375 1-37 (255)
427 3ihm_A Styrene monooxygenase A 48.4 13 0.00044 38.6 4.1 32 332-375 23-54 (430)
428 2wm3_A NMRA-like family domain 48.4 7.6 0.00026 37.5 2.2 99 331-448 5-115 (299)
429 3euw_A MYO-inositol dehydrogen 48.3 9.6 0.00033 38.2 3.0 80 332-434 5-86 (344)
430 2v3a_A Rubredoxin reductase; a 48.3 13 0.00045 37.6 4.0 35 331-375 4-38 (384)
431 2bry_A NEDD9 interacting prote 48.2 15 0.00052 39.1 4.7 37 330-378 91-127 (497)
432 4hkt_A Inositol 2-dehydrogenas 48.2 12 0.00041 37.3 3.7 81 332-434 4-84 (331)
433 3qj4_A Renalase; FAD/NAD(P)-bi 47.9 11 0.00037 37.2 3.3 35 332-375 2-36 (342)
434 1f8f_A Benzyl alcohol dehydrog 47.6 38 0.0013 34.2 7.3 50 314-374 174-223 (371)
435 4a7p_A UDP-glucose dehydrogena 47.6 34 0.0012 36.6 7.2 33 331-375 8-40 (446)
436 1ek6_A UDP-galactose 4-epimera 47.6 19 0.00066 35.2 5.0 101 332-447 3-132 (348)
437 1v59_A Dihydrolipoamide dehydr 47.5 16 0.00056 38.0 4.8 34 331-376 5-38 (478)
438 3lad_A Dihydrolipoamide dehydr 47.5 17 0.00058 37.9 4.8 33 331-375 3-35 (476)
439 3c4n_A Uncharacterized protein 47.5 17 0.00059 37.0 4.8 35 332-376 37-71 (405)
440 1wly_A CAAR, 2-haloacrylate re 47.4 30 0.001 34.3 6.4 50 314-375 129-179 (333)
441 2fzw_A Alcohol dehydrogenase c 47.4 36 0.0012 34.3 7.2 45 319-374 179-223 (373)
442 2d1y_A Hypothetical protein TT 47.4 27 0.00093 33.2 5.9 79 328-422 3-88 (256)
443 2fwm_X 2,3-dihydro-2,3-dihydro 47.4 59 0.002 30.7 8.3 77 328-422 4-85 (250)
444 2o23_A HADH2 protein; HSD17B10 47.3 21 0.00071 33.6 5.0 78 327-422 8-97 (265)
445 2bc0_A NADH oxidase; flavoprot 47.2 18 0.0006 38.2 5.0 37 331-376 35-71 (490)
446 3rd5_A Mypaa.01249.C; ssgcid, 47.2 13 0.00045 36.2 3.7 77 328-422 13-97 (291)
447 1p0f_A NADP-dependent alcohol 47.1 37 0.0013 34.3 7.2 45 319-374 180-224 (373)
448 1rpn_A GDP-mannose 4,6-dehydra 47.0 33 0.0011 33.3 6.6 105 328-447 11-138 (335)
449 3ko8_A NAD-dependent epimerase 46.9 54 0.0018 31.4 8.0 94 333-447 2-113 (312)
450 2qa1_A PGAE, polyketide oxygen 46.8 15 0.00051 39.2 4.4 24 329-352 9-32 (500)
451 3c4a_A Probable tryptophan hyd 46.8 17 0.00059 36.6 4.6 20 333-352 2-21 (381)
452 3slg_A PBGP3 protein; structur 46.8 73 0.0025 31.5 9.2 101 328-447 21-141 (372)
453 3gaf_A 7-alpha-hydroxysteroid 46.6 33 0.0011 32.7 6.4 38 327-375 8-45 (256)
454 3uxy_A Short-chain dehydrogena 46.5 39 0.0013 32.6 7.0 37 328-375 25-61 (266)
455 1ojt_A Surface protein; redox- 46.5 17 0.00057 38.3 4.6 34 331-376 6-39 (482)
456 3ihg_A RDME; flavoenzyme, anth 46.4 15 0.0005 39.1 4.2 34 331-376 5-38 (535)
457 4fs3_A Enoyl-[acyl-carrier-pro 46.4 19 0.00066 34.7 4.7 36 328-375 3-41 (256)
458 3pxx_A Carveol dehydrogenase; 46.4 33 0.0011 32.8 6.4 37 328-375 7-43 (287)
459 2ehd_A Oxidoreductase, oxidore 46.3 28 0.00096 32.2 5.7 34 331-375 5-38 (234)
460 2cdc_A Glucose dehydrogenase g 46.3 46 0.0016 33.6 7.7 33 331-375 181-213 (366)
461 1nff_A Putative oxidoreductase 46.0 16 0.00055 35.0 4.1 78 327-422 3-92 (260)
462 2nm0_A Probable 3-oxacyl-(acyl 46.0 44 0.0015 32.0 7.2 77 327-422 17-98 (253)
463 1qsg_A Enoyl-[acyl-carrier-pro 45.9 20 0.00068 34.3 4.7 35 329-375 7-44 (265)
464 2e1m_A L-glutamate oxidase; L- 45.8 18 0.00061 37.8 4.6 35 329-375 42-76 (376)
465 2bi7_A UDP-galactopyranose mut 45.8 17 0.00058 37.3 4.5 34 331-376 3-36 (384)
466 3rwb_A TPLDH, pyridoxal 4-dehy 45.7 19 0.00064 34.3 4.5 38 327-375 2-39 (247)
467 3uve_A Carveol dehydrogenase ( 45.6 25 0.00087 33.9 5.5 38 327-375 7-44 (286)
468 1kol_A Formaldehyde dehydrogen 45.5 36 0.0012 34.8 6.8 49 314-374 170-218 (398)
469 1xhc_A NADH oxidase /nitrite r 45.4 12 0.00042 38.0 3.3 34 331-377 8-41 (367)
470 1o94_A Tmadh, trimethylamine d 45.3 17 0.00059 40.8 4.8 35 330-376 388-422 (729)
471 1s3e_A Amine oxidase [flavin-c 45.3 17 0.0006 38.2 4.6 22 331-352 4-25 (520)
472 4fk1_A Putative thioredoxin re 45.3 18 0.0006 35.2 4.3 33 331-375 6-38 (304)
473 2hcy_A Alcohol dehydrogenase 1 45.2 31 0.0011 34.5 6.2 44 318-374 158-202 (347)
474 3dk9_A Grase, GR, glutathione 45.2 16 0.00053 38.3 4.1 34 330-375 19-52 (478)
475 4imr_A 3-oxoacyl-(acyl-carrier 45.1 69 0.0024 31.0 8.5 76 328-421 30-119 (275)
476 1fec_A Trypanothione reductase 45.0 22 0.00077 37.5 5.4 32 331-373 3-34 (490)
477 3sc4_A Short chain dehydrogena 44.9 60 0.0021 31.5 8.1 38 327-375 5-42 (285)
478 3moi_A Probable dehydrogenase; 44.9 9.5 0.00032 39.2 2.4 81 332-433 3-84 (387)
479 3csu_A Protein (aspartate carb 44.8 1.4E+02 0.0049 30.5 11.2 131 269-420 94-230 (310)
480 3oqb_A Oxidoreductase; structu 44.7 15 0.00053 37.3 3.9 96 330-444 5-112 (383)
481 3nyc_A D-arginine dehydrogenas 44.7 13 0.00045 36.6 3.3 33 331-376 9-41 (381)
482 3g17_A Similar to 2-dehydropan 44.7 18 0.00062 35.6 4.3 99 332-455 3-104 (294)
483 2cdu_A NADPH oxidase; flavoenz 44.7 19 0.00063 37.4 4.6 34 333-376 2-35 (452)
484 3uuw_A Putative oxidoreductase 44.7 13 0.00044 36.7 3.2 82 330-434 5-87 (308)
485 2vvm_A Monoamine oxidase N; FA 44.5 19 0.00064 37.5 4.6 21 332-352 40-60 (495)
486 3grk_A Enoyl-(acyl-carrier-pro 44.5 18 0.00062 35.5 4.3 37 327-375 27-66 (293)
487 1e3j_A NADP(H)-dependent ketos 44.4 31 0.0011 34.6 6.1 48 314-374 153-200 (352)
488 1zq6_A Otcase, ornithine carba 44.4 1.6E+02 0.0054 30.9 11.6 137 263-421 116-275 (359)
489 2gqf_A Hypothetical protein HI 44.3 15 0.00052 38.1 3.8 35 331-377 4-38 (401)
490 3l4b_C TRKA K+ channel protien 44.3 16 0.00055 34.1 3.7 31 333-375 2-32 (218)
491 3d6n_B Aspartate carbamoyltran 44.3 2E+02 0.007 29.2 12.1 127 269-421 85-215 (291)
492 1yb1_A 17-beta-hydroxysteroid 44.2 45 0.0016 31.9 7.0 38 327-375 27-64 (272)
493 3pi7_A NADH oxidoreductase; gr 44.1 71 0.0024 31.9 8.7 76 320-420 155-242 (349)
494 3op4_A 3-oxoacyl-[acyl-carrier 43.8 14 0.00049 35.1 3.3 77 328-422 6-94 (248)
495 2yg5_A Putrescine oxidase; oxi 43.6 20 0.00067 36.7 4.5 34 330-375 4-37 (453)
496 1nhp_A NADH peroxidase; oxidor 43.6 16 0.00054 37.9 3.9 35 333-377 2-36 (447)
497 3db2_A Putative NADPH-dependen 43.6 16 0.00054 36.9 3.7 84 331-435 5-88 (354)
498 2pnf_A 3-oxoacyl-[acyl-carrier 43.6 36 0.0012 31.5 6.0 37 328-375 4-40 (248)
499 3da1_A Glycerol-3-phosphate de 43.5 16 0.00054 39.7 4.0 33 331-375 18-50 (561)
500 1xdi_A RV3303C-LPDA; reductase 43.4 18 0.00062 38.1 4.4 36 332-376 3-38 (499)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=8.7e-207 Score=1661.85 Aligned_cols=540 Identities=52% Similarity=0.927 Sum_probs=532.4
Q ss_pred ccccccccCCCCccCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHHhcCCCchhHHHHhHHhhhhhhhhhHHHhhh
Q 007703 50 ASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLID 129 (592)
Q Consensus 50 ~~G~~ll~~p~~NKG~aFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~Ky~~L~~L~~~Ne~Lfy~ll~~ 129 (592)
++|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.+|++++++|+||+||++||++||+||||++++
T Consensus 1 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 80 (555)
T 1gq2_A 1 KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTS 80 (555)
T ss_dssp CCTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhcCcceeeehhhHhh
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceecccCCCCCCccccchh
Q 007703 130 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 209 (592)
Q Consensus 130 ~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iG 209 (592)
|++|+|||+||||||++|++||+|||+|+|+|||++|+|+++++++|||.++|+|||||||||||||||||++|||||||
T Consensus 81 ~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipvG 160 (555)
T 1gq2_A 81 DIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVG 160 (555)
T ss_dssp THHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCGGGGGHHHHH
T ss_pred hHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCCCCccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchH
Q 007703 210 KLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA 289 (592)
Q Consensus 210 Kl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp~YlG~r~~R~~geeY~~~idefv~av~~~fGp~~lIqfEDf~~~~A 289 (592)
|++|||+||||||++|||||||+|||||+||+||+||||||+|++|++|++|+||||++|+++|||+++||||||+++||
T Consensus 161 Kl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~~~a 240 (555)
T 1gq2_A 161 KLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANA 240 (555)
T ss_dssp HHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEeecccCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCceeccCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcE
Q 007703 290 FELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 369 (592)
Q Consensus 290 f~lL~ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i 369 (592)
|+||+|||++||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||+++|
T Consensus 241 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~-G~~~eeA~~~i 319 (555)
T 1gq2_A 241 FRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKE-GVSKEEAIKRI 319 (555)
T ss_dssp HHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHH-TCCHHHHHTTE
T ss_pred HHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChHHHhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999985 99999999999
Q ss_pred EEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCC
Q 007703 370 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNP 449 (592)
Q Consensus 370 ~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNP 449 (592)
||||++|||+++|.+ |+++|++||++.++.++|+|||+.+|||||||+|+++|+||+|||++|+++|+ ||||||||||
T Consensus 320 ~~~D~~Gli~~~r~~-l~~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~-~PIIFaLSNP 397 (555)
T 1gq2_A 320 WMVDSKGLIVKGRAS-LTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNK-RPIIFALSNP 397 (555)
T ss_dssp EEEETTEECBTTCSS-CCTTGGGGCBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCS-SCEEEECCSS
T ss_pred EEEECCCeeeCCCCC-chHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCC-CCEEEECCCC
Confidence 999999999999964 99999999998777789999999999999999999999999999999999999 9999999999
Q ss_pred CCCCCCCHHHHhccccCcEEEecCCCCCccee-CCeeeCccCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHccc
Q 007703 450 TSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQV 528 (592)
Q Consensus 450 t~~aEct~e~A~~wt~G~aifAsGSPF~pV~~-~G~~~~p~Q~NN~yiFPGiglG~~~s~a~~Itd~m~~aAA~aLA~~v 528 (592)
|+++|||||||++||+|+|||||||||+||+| +||+++|||+||+|+|||||||+++++|++|||+|+++||+|||+++
T Consensus 398 t~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~alA~~v 477 (555)
T 1gq2_A 398 TSKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAEVIAQEV 477 (555)
T ss_dssp GGGCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHTC
T ss_pred CCccCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEeccccccceeeccchhhhhHhcCCeECCHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred CccccCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCccCCCCCCC
Q 007703 529 TEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 592 (592)
Q Consensus 529 ~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~G~a~~~~~p~d~~~~i~~~m~~P~Y~~~~ 592 (592)
+++++..+.|||++++||+||.+||.||+++|+++|+|+..++|+|+.+|++++||+|+|++|+
T Consensus 478 ~~~~~~~~~i~P~~~~ir~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~~~P~Y~~~~ 541 (555)
T 1gq2_A 478 SEENLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTASTYPQPEDLEAFIRSQVYSTDYNCFV 541 (555)
T ss_dssp CHHHHHHTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHTTSCCCSCCCCS
T ss_pred ccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHhccCCCCCCcc
Confidence 9999999999999999999999999999999999999998788899999999999999999873
No 2
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=7.3e-206 Score=1658.85 Aligned_cols=541 Identities=50% Similarity=0.908 Sum_probs=532.6
Q ss_pred ccccccccCCCCccCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHHhcCCCchhHHHHhHHhhhhhhhhhHHHhhh
Q 007703 50 ASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLID 129 (592)
Q Consensus 50 ~~G~~ll~~p~~NKG~aFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~Ky~~L~~L~~~Ne~Lfy~ll~~ 129 (592)
.+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++++|+||+||++||++||+||||++++
T Consensus 3 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 82 (564)
T 1pj3_A 3 EKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQD 82 (564)
T ss_dssp CCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCCSHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CchHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhhcccceeehhhhhh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceecccCCCCCCccccchh
Q 007703 130 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 209 (592)
Q Consensus 130 ~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iG 209 (592)
|++|+|||+||||||++|++||+|||+|+|+|||++|+|+|+++|+|||.++|+|||||||||||||||||++||+||||
T Consensus 83 ~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD~G~~gm~ipvG 162 (564)
T 1pj3_A 83 DIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVG 162 (564)
T ss_dssp CHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCCCGGGGGHHHHH
T ss_pred CHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCCCCCCcccceeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchH
Q 007703 210 KLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA 289 (592)
Q Consensus 210 Kl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp~YlG~r~~R~~geeY~~~idefv~av~~~fGp~~lIqfEDf~~~~A 289 (592)
|++|||+||||||++|||||||+|||||+||+||+||||||+|++|++|++|+||||++|+++|||+++||||||+++||
T Consensus 163 Kl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~~~a 242 (564)
T 1pj3_A 163 KLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNA 242 (564)
T ss_dssp HHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcEEeehhcCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCceeccCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcE
Q 007703 290 FELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 369 (592)
Q Consensus 290 f~lL~ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i 369 (592)
|+||+|||++||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||+++|
T Consensus 243 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~-Gl~~eeA~~~i 321 (564)
T 1pj3_A 243 FRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVEN-GLSEQEAQKKI 321 (564)
T ss_dssp HHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHHT-TCCHHHHHHTE
T ss_pred HHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHHc-CCChHHhhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999985 99999999999
Q ss_pred EEEccCCcccCCCccCCchhchhhccccCCC--CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecC
Q 007703 370 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 370 ~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~--~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
||||++|||+++|.++|+++|++||++.++. ++|+|||+.+|||||||+|+++|+||||||++|+++|+ ||||||||
T Consensus 322 ~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~-~PIIFaLS 400 (564)
T 1pj3_A 322 WMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINE-RPVIFALS 400 (564)
T ss_dssp EEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCS-SCEEEECC
T ss_pred EEEeCCCeEECCCcccchHHHHHHHHhcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCC-CCEEEECC
Confidence 9999999999999445999999999987766 79999999999999999999999999999999999999 99999999
Q ss_pred CCCCCCCCCHHHHhccccCcEEEecCCCCCccee-CCeeeCccCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHc
Q 007703 448 NPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAK 526 (592)
Q Consensus 448 NPt~~aEct~e~A~~wt~G~aifAsGSPF~pV~~-~G~~~~p~Q~NN~yiFPGiglG~~~s~a~~Itd~m~~aAA~aLA~ 526 (592)
|||+++|||||||++||+|+|||||||||+||+| +||+++|||+||+|+|||||||+++++|++|||+|+++||+|||+
T Consensus 401 NPt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~G~~~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~aLA~ 480 (564)
T 1pj3_A 401 NPTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAKALTS 480 (564)
T ss_dssp SSGGGCSCCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHTTCSCCCHHHHHHHHHHHHT
T ss_pred CCCCccCcCHHHHHhhccCCEEEEeCCCCCceeecCCceecccccceeeeccchhhhhHhcCCeECCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred ccCccccCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCccCCCCCCC
Q 007703 527 QVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 592 (592)
Q Consensus 527 ~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~G~a~~~~~p~d~~~~i~~~m~~P~Y~~~~ 592 (592)
+++++++..+.|||+++++|+||.+||.||+++|+++|+|+..++|+|+.+|+++.||+|.|++|+
T Consensus 481 ~v~~~~~~~~~i~P~~~~~r~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~~~p~Y~~~~ 546 (564)
T 1pj3_A 481 QLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYVKERTWRSEYDSLL 546 (564)
T ss_dssp TCCHHHHHTTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHHTCCCCSCCCCC
T ss_pred hcccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHhhCCCCCCcc
Confidence 999999999999999999999999999999999999999998788899999999999999999873
No 3
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=4.8e-206 Score=1664.59 Aligned_cols=544 Identities=47% Similarity=0.849 Sum_probs=535.2
Q ss_pred ccccccccccccCCCCccCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHHhcCCCchhHHHHhHHhhhhhhhhhHH
Q 007703 46 TISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYK 125 (592)
Q Consensus 46 ~~~~~~G~~ll~~p~~NKG~aFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~Ky~~L~~L~~~Ne~Lfy~ 125 (592)
..+..+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.+|++++++|+||+||++||++||+||||
T Consensus 33 ~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfyr 112 (605)
T 1o0s_A 33 VTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQDRNEKLFYR 112 (605)
T ss_dssp CCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHCHHHHHH
T ss_pred cccCcchHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHhhcccchhhhh
Confidence 44568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccCc--chHHHHHhcCCCCCeeEEEEecCceecccCCCCCCc
Q 007703 126 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEK--GKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQG 203 (592)
Q Consensus 126 ll~~~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~--g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~G 203 (592)
++++|++|+|||+||||||++|++||+|||+|+|+|||++|+ |+++++|+|||.++|+|||||||||||||||||++|
T Consensus 113 ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g 192 (605)
T 1o0s_A 113 VVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYG 192 (605)
T ss_dssp HHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECSSCBTTTBCCGGGG
T ss_pred hhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEccccceecCCCCCCc
Confidence 999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred cccchhhHHHHHHhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeec
Q 007703 204 MGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFED 283 (592)
Q Consensus 204 mgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp~YlG~r~~R~~geeY~~~idefv~av~~~fGp~~lIqfED 283 (592)
|||||||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++|++|+||||++|+++|||+++|||||
T Consensus 193 ~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~~~fGp~~~I~~ED 272 (605)
T 1o0s_A 193 IGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFED 272 (605)
T ss_dssp GHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHHHHhCCCcEeeHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHcCCCceeccCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChh
Q 007703 284 FANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVE 363 (592)
Q Consensus 284 f~~~~Af~lL~ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~e 363 (592)
|+++|||+||+|||++||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|
T Consensus 273 f~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~-Gl~~e 351 (605)
T 1o0s_A 273 FANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQNE-GISKE 351 (605)
T ss_dssp CCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHTT-TCCHH
T ss_pred cCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999974 99999
Q ss_pred hhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceE
Q 007703 364 ETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLI 443 (592)
Q Consensus 364 eA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPII 443 (592)
||+++|||||++|||+++|.+ |+++|++||++.++.++|+|||+.+|||||||+|+++|+||+|||++|+++|+ ||||
T Consensus 352 eA~~~i~~vD~~Gli~~~r~~-l~~~k~~~A~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~-~PII 429 (605)
T 1o0s_A 352 EACNRIYLMDIDGLVTKNRKE-MNPRHVQFAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINE-RPII 429 (605)
T ss_dssp HHHHTEEEEETTEECBTTCSS-CCGGGTTTCBSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCS-SCEE
T ss_pred hhhCeEEEEECCCceeCCCCC-chHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCC-CCEE
Confidence 999999999999999999964 99999999998777789999999999999999999999999999999999999 9999
Q ss_pred EecCCCCCCCCCCHHHHhccccCcEEEecCCCCCcceeCCeeeCccCCcccccchhhhHHHHHhCCcccCHHHHHHHHHH
Q 007703 444 LALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEA 523 (592)
Q Consensus 444 FaLSNPt~~aEct~e~A~~wt~G~aifAsGSPF~pV~~~G~~~~p~Q~NN~yiFPGiglG~~~s~a~~Itd~m~~aAA~a 523 (592)
|||||||+++|||||||++||+|+|||||||||+||+|+||+++|||+||+|+|||||||+++++|++|||+|+++||+|
T Consensus 430 FaLSNPt~~aE~~pe~a~~~t~G~aivATGspF~pV~~~Grs~~pnQ~NN~liFPGi~lGal~~~A~~Itd~M~~aAA~a 509 (605)
T 1o0s_A 430 FALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELNGHTYKPGQGNNAYIFPGVALGTILFQIRHVDNDLFLLAAKK 509 (605)
T ss_dssp EECCSSGGGCSSCHHHHHHTTTSCCEEEESSCCCCEEETTEEECCEECCGGGTHHHHHHHHHHHTBSCCCHHHHHHHHHH
T ss_pred EECCCCCCCcCcCHHHHHhhccCCEEEEECCCCCCeeECCEEeccccccceeeccchhhhhhhcCCeEcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcccCccccCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCccCCCCCCC
Q 007703 524 LAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 592 (592)
Q Consensus 524 LA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~G~a~~~~~p~d~~~~i~~~m~~P~Y~~~~ 592 (592)
||++++++++..|.|||++++||+||.+||.||+++|+++|+|+..++|+|+.+|+++.||+|+|++|+
T Consensus 510 LA~~v~~~~~~~~~i~P~~~dir~vs~~VA~AVa~~A~~~GvA~~~~~~~d~~~~i~~~~w~P~Y~~~~ 578 (605)
T 1o0s_A 510 VASCVTEDSLKVGRVYPQLKEIREISIQIAVEMAKYCYKNGTANLYPQPEDLEKYVRAQVYNTEYEELI 578 (605)
T ss_dssp HHHTCCHHHHTTTCCSCCGGGHHHHHHHHHHHHHHHHHHTTCBCSSSCCSCHHHHHHHHSCCCSCCCCS
T ss_pred HHhhcccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHhccCCCCCccc
Confidence 999999999999999999999999999999999999999999998788899999999999999999873
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=3.7e-121 Score=976.86 Aligned_cols=382 Identities=32% Similarity=0.416 Sum_probs=344.2
Q ss_pred hcccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceecccCCCCC-Cccccc
Q 007703 129 DNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGC-QGMGIP 207 (592)
Q Consensus 129 ~~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~-~GmgI~ 207 (592)
++.+ .||++||||||++|++|+ +|+++++++..+| ++|||||||||||||||+|+ +|||||
T Consensus 56 ~~~~-dLslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILGLGDiG~~agmpIm 117 (487)
T 3nv9_A 56 AGFN-WFNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLGDGDVTPPGGLGVM 117 (487)
T ss_dssp SSGG-GHHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGGGBCCCGGGGHHHH
T ss_pred CCHH-HCeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEEEEEEcCceeeeccccccccCCchh
Confidence 3444 499999999999999997 4677777666666 48999999999999999999 599999
Q ss_pred hhhHHHHHHhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCc
Q 007703 208 VGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANH 287 (592)
Q Consensus 208 iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp~YlG~r~~R~~geeY~~~idefv~av~~~fGp~~lIqfEDf~~~ 287 (592)
+||++|||+||||| |||||||+||+| +++|| ++|+ |||+++.++||. ||||||+++
T Consensus 118 eGKl~Lyk~~aGId---~lPI~LD~gt~~--~~~d~---------------defv-e~v~~~~P~fG~---InlEDf~ap 173 (487)
T 3nv9_A 118 EGKALLMKYLGGID---AVPICIDSKNKE--GKNDP---------------DAVI-EFVQRIQHTFGA---INLEDISQP 173 (487)
T ss_dssp HHHHHHHHHHHCCE---EEEEECCCBCTT--SCBCH---------------HHHH-HHHHHHGGGCSE---EEECSCCTT
T ss_pred hhHHHHHHhcCCCc---eeeeEEeCCCcc--ccCCH---------------HHHH-HHHHHhCCCCCe---ecHhhcCCc
Confidence 99999999999999 999999999765 45664 3333 466666666655 999999999
Q ss_pred hHHHHHHHHcC--CCceeccCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhh
Q 007703 288 NAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEET 365 (592)
Q Consensus 288 ~Af~lL~ryr~--~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA 365 (592)
|||++|+|||+ +||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+. .|+++
T Consensus 174 ~af~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~-----~G~~~--- 245 (487)
T 3nv9_A 174 NCYKILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVT-----AGADP--- 245 (487)
T ss_dssp HHHHHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHH-----TTCCG---
T ss_pred hHHHHHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHH-----cCCCc---
Confidence 99999999998 799999999999999999999999999999999999999999999999999975 49986
Q ss_pred cCcEEEEccCCcccCCCccCC-----chhchhhcccc--CCCCCHHHHhcccCCcEEEeccCC-CCCCCHHHHHHHHccC
Q 007703 366 RKKICLVDSKGLIVSSRKDSL-----QHFKKPWAHEH--EPVNNLLDAVKVIKPTILIGSSGV-GRTFTKEVIEAMASFN 437 (592)
Q Consensus 366 ~~~i~lvD~~GLv~~~R~~~l-----~~~k~~fA~~~--~~~~~L~e~V~~vkPtvLIG~S~~-~g~Ft~evv~~Ma~~~ 437 (592)
++|||||++|||+++|.+ | .++|.+||++. ++..+|+|+|+. +|||||+|++ +|+||+|+|++|+
T Consensus 246 -~~i~l~D~~Gli~~~R~~-l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~--adVlIG~S~~~pg~ft~e~V~~Ma--- 318 (487)
T 3nv9_A 246 -KKIVMFDSKGSLHNGRED-IKKDTRFYRKWEICETTNPSKFGSIAEACVG--ADVLISLSTPGPGVVKAEWIKSMG--- 318 (487)
T ss_dssp -GGEEEEETTEECCTTCHH-HHHCGGGHHHHHHHHHSCTTCCCSHHHHHTT--CSEEEECCCSSCCCCCHHHHHTSC---
T ss_pred -ccEEEEeccccccCCcch-hhhhcccHHHHHHHHhcccccCCCHHHHHhc--CCEEEEecccCCCCCCHHHHHhhc---
Confidence 899999999999999964 6 34667888864 356799999998 7999999977 7999999999997
Q ss_pred CCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCcceeCCeeeCccCCcccccchhhhHHHHHhCCcccCHHHH
Q 007703 438 EVKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDML 517 (592)
Q Consensus 438 e~rPIIFaLSNPt~~aEct~e~A~~wt~G~aifAsGSPF~pV~~~G~~~~p~Q~NN~yiFPGiglG~~~s~a~~Itd~m~ 517 (592)
+ ||||||||||| +|||||||++ +|+||||||| +++|||+||+|+|||||||+++++|++|||+|+
T Consensus 319 ~-~PIIFaLSNPt--pEi~pe~A~~--~G~aIvATGr----------sd~PnQ~NN~liFPGI~~Gal~~~A~~Itd~M~ 383 (487)
T 3nv9_A 319 E-KPIVFCCANPV--PEIYPYEAKE--AGAYIVATGR----------GDFPNQVNNSVGFPGILKGALIVRARKITDNMA 383 (487)
T ss_dssp S-SCEEEECCSSS--CSSCHHHHHH--TTCSEEEESC----------TTSSSBCCGGGTHHHHHHHHHHTTCSSCCHHHH
T ss_pred C-CCEEEECCCCC--ccCCHHHHHH--hCCEEEEECC----------CCCcccCcceeEcchhhHHHHHcCCcccCHHHH
Confidence 5 99999999999 7999999998 6999999994 678999999999999999999999999999999
Q ss_pred HHHHHHHHcccCccccCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCC-CCchhHHHHHHhCC
Q 007703 518 LAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRL-PRPQNLVKCAESCM 583 (592)
Q Consensus 518 ~aAA~aLA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~G~a~~~-~~p~d~~~~i~~~m 583 (592)
++||++||++++++++.++.|||++++ ++||.+||.||+++|+++|+|+.. ++++++.+++++.+
T Consensus 384 ~AAA~ALA~~v~~~~l~~~~i~P~~~d-~~Vs~~VA~AVa~aA~~~GvA~~~~~~~~~~~~~~~~~~ 449 (487)
T 3nv9_A 384 IAASRALAEFAEKRGINPDNIIGTMDE-PGIFPKEAADVAMQAIKDGVARVTDLTWQQVYDIAEHDI 449 (487)
T ss_dssp HHHHHHHHHHHHHTCCBTTBCSCCTTC-TTHHHHHHHHHHHHHHHHTCCSCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCcccCCCCceeCCccc-cchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999 689999999999999999999976 67889999988765
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=5.7e-113 Score=903.84 Aligned_cols=362 Identities=29% Similarity=0.411 Sum_probs=332.5
Q ss_pred hhhHHHhhhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceecccCCCC
Q 007703 121 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 200 (592)
Q Consensus 121 ~Lfy~ll~~~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 200 (592)
.+++++.+++.+ +|||+||||||++|++|++ +| ++++ +|+.++++|+|||||+|||||||+|
T Consensus 23 ~~~~~~~~~~~~-~l~i~YtP~V~~~c~~i~~---~p----------~~v~----~~t~~~~~V~VvTdG~~iLGLGD~G 84 (398)
T 2a9f_A 23 EVQPKVDIKTKH-DLSIAYTPGVASVSSAIAK---DK----------TLAY----DLTTKKNTVAVISDGTAVLGLGDIG 84 (398)
T ss_dssp EEEESSCCSSHH-HHHHHSTTTTHHHHHHHHH---CG----------GGHH----HHSGGGTEEEEEECSSSCTTSCCCC
T ss_pred EEEEecccCCHH-HCeEEECchHHHHHHHHHh---CH----------HHHH----HhcccCCEEEEEECCccccCCCCcc
Confidence 355666677655 4899999999999999873 44 4444 7999999999999999999999999
Q ss_pred CC-ccccchhhHHHHHHhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCC-ee
Q 007703 201 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 278 (592)
Q Consensus 201 ~~-GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp~YlG~r~~R~~geeY~~~idefv~av~~~fGp~-~l 278 (592)
++ ||+||+||+.||++||||| |+|||||+|| +||||++|+..| |. ..
T Consensus 85 ~~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~-p~F~~ 133 (398)
T 2a9f_A 85 PEAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALA-PTFGG 133 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcC-CceeE
Confidence 98 9999999999999999999 9999999996 799999999999 88 89
Q ss_pred eeeecCCCchHHHHHHHHcCC--CceeccCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHH
Q 007703 279 IQFEDFANHNAFELLAKYGTT--HLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (592)
Q Consensus 279 IqfEDf~~~~Af~lL~ryr~~--~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (592)
||||||+++|||++|+|||++ +|||||||||||+|++||++||+|++|++++|+||||+|||+||+|||++++.+
T Consensus 134 I~lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~--- 210 (398)
T 2a9f_A 134 INLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAA--- 210 (398)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eccccCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHc---
Confidence 999999999999999999975 999999999999999999999999999999999999999999999999999874
Q ss_pred hcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCC---CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHH
Q 007703 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAM 433 (592)
Q Consensus 357 ~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~---~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~M 433 (592)
|. ++||++|++|||+++|.++|+++|++||++... ..+|+|+|+. +|+|||+|+ +|+||+|+|++|
T Consensus 211 --Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~--ADV~IG~Sa-pgl~T~EmVk~M 279 (398)
T 2a9f_A 211 --GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEG--ADIFIGVSA-PGVLKAEWISKM 279 (398)
T ss_dssp --TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHT--TCSEEECCS-TTCCCHHHHHTS
T ss_pred --CC------CeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhcc--CCEEEecCC-CCCCCHHHHHhh
Confidence 74 899999999999999933599999999987442 4689999998 899999999 899999999999
Q ss_pred HccCCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCcceeCCeeeCccCCcccccchhhhHHHHHhCCcccC
Q 007703 434 ASFNEVKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVH 513 (592)
Q Consensus 434 a~~~e~rPIIFaLSNPt~~aEct~e~A~~wt~G~aifAsGSPF~pV~~~G~~~~p~Q~NN~yiFPGiglG~~~s~a~~It 513 (592)
++ +|||||||||| +||+||||++| |+|||||| |+++|||+||+|+|||||||+++++|++||
T Consensus 280 a~----~pIIfalsNPt--~E~~pe~a~~~--g~~i~atG----------rs~~p~Q~NN~~~FPgi~~Gal~~~a~~I~ 341 (398)
T 2a9f_A 280 AA----RPVIFAMANPI--PEIYPDEALEA--GAYIVGTG----------RSDFPNQINNVLAFPGIFRGALDARAKTIT 341 (398)
T ss_dssp CS----SCEEEECCSSS--CSSCHHHHHTT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHTCSSCC
T ss_pred CC----CCEEEECCCCC--ccCCHHHHHHh--CCeEEEeC----------CCCCCCcCCceeEcchHHHHHHHcCCcCCC
Confidence 95 99999999999 89999999999 99999999 689999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcccCccccCCCcccCCCCCchhhHHHHHHHHHHHHHHcC
Q 007703 514 DDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELG 564 (592)
Q Consensus 514 d~m~~aAA~aLA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~G 564 (592)
|+|+++||+|||++++++++.++.|||++++ |+||.+||.||+++|++..
T Consensus 342 d~m~~aAa~alA~~~~~~~~~~~~i~P~~~~-~~v~~~VA~aVa~~A~~~~ 391 (398)
T 2a9f_A 342 VEMQIAAAKGIASLVPDDALSTTNIIPDAFK-EGVAEIVAKSVRSVVLKSE 391 (398)
T ss_dssp HHHHHHHHHHHHHTCSSCSSCCSCCSCSSTT-HHHHHHHTTTTCCCCC---
T ss_pred HHHHHHHHHHHHhcCCcccCCCCccCCCCCc-chhHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999 9999999999999998653
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=1.6e-107 Score=860.91 Aligned_cols=354 Identities=31% Similarity=0.445 Sum_probs=331.9
Q ss_pred hhhHHHhhhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceecccCCCC
Q 007703 121 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 200 (592)
Q Consensus 121 ~Lfy~ll~~~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 200 (592)
..++++.+++.|+ |||+||||||++|++|+ ++|.++| +|+.++++|+|||||||||||||+|
T Consensus 27 ~~~~~~~~~~~~~-l~i~YtP~V~~~c~~~~---~~p~~v~--------------~~t~~~~~V~VvTdg~~vLGlGD~G 88 (388)
T 1vl6_A 27 RTALPVEKVDRET-LSLLYTPGVADVARACA---EDPEKTY--------------VYTSRWNTVAVVSDGSAVLGLGNIG 88 (388)
T ss_dssp EEECSCSCCCHHH-HHHHSTTTHHHHHHHHH---HCGGGHH--------------HHSGGGGEEEEEECSTTBTTTBSCC
T ss_pred EEEEeeecCCHHH-CeEEECchHHHHHHHHH---hCHHHHH--------------hhcccCCeEEEEECCccccCCCccc
Confidence 5678888888877 89999999999999987 5555544 7999999999999999999999999
Q ss_pred CC-ccccchhhHHHHHHhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCC-ee
Q 007703 201 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 278 (592)
Q Consensus 201 ~~-GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp~YlG~r~~R~~geeY~~~idefv~av~~~fGp~-~l 278 (592)
++ ||+||+||+.||++||||| |+|||||+|| +||||++|++.| |. ..
T Consensus 89 ~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~~-p~f~~ 137 (388)
T 1vl6_A 89 PYGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSLE-PSFGG 137 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHTG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHcC-CcceE
Confidence 98 9999999999999999999 9999999996 799999999999 88 89
Q ss_pred eeeecCCCchHHHHHHHHcC--CCceeccCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHH
Q 007703 279 IQFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (592)
Q Consensus 279 IqfEDf~~~~Af~lL~ryr~--~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (592)
||||||+++|||++|+|||+ +||||||||||||+|++||+++|+|++|++++|+||||+|||+||+++|++++..
T Consensus 138 i~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~--- 214 (388)
T 1vl6_A 138 INLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDL--- 214 (388)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eCHhhcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhC---
Confidence 99999999999999999997 5999999999999999999999999999999999999999999999999999874
Q ss_pred hcCCChhhhcCcEEEEccCCcccCCCccC-CchhchhhccccCC---CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHH
Q 007703 357 QTKAPVEETRKKICLVDSKGLIVSSRKDS-LQHFKKPWAHEHEP---VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEA 432 (592)
Q Consensus 357 ~~G~s~eeA~~~i~lvD~~GLv~~~R~~~-l~~~k~~fA~~~~~---~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~ 432 (592)
| .++||++|++|||+.+|.+. |+++|++||++... ..+|.|+|+. +|+|||+|+ +|+||+|+|+.
T Consensus 215 --G------~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~--ADVlIG~Sa-p~l~t~emVk~ 283 (388)
T 1vl6_A 215 --G------VKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEG--ADFFIGVSR-GNILKPEWIKK 283 (388)
T ss_dssp --T------CCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTT--CSEEEECSC-SSCSCHHHHTT
T ss_pred --C------CCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHcc--CCEEEEeCC-CCccCHHHHHh
Confidence 6 38999999999999999643 99999999987432 4689999998 899999999 79999999999
Q ss_pred HHccCCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCcceeCCeeeCccCCcccccchhhhHHHHHhCCccc
Q 007703 433 MASFNEVKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRV 512 (592)
Q Consensus 433 Ma~~~e~rPIIFaLSNPt~~aEct~e~A~~wt~G~aifAsGSPF~pV~~~G~~~~p~Q~NN~yiFPGiglG~~~s~a~~I 512 (592)
|++ +||||+||||| +||+||||++| |+|||||| |+++|||+||+|+|||||+|+++++|+ |
T Consensus 284 Ma~----~pIIfalSNPt--~E~~p~~a~~~--g~~i~atG----------r~~~p~Q~NN~~~FPgi~~Gal~~~a~-i 344 (388)
T 1vl6_A 284 MSR----KPVIFALANPV--PEIDPELAREA--GAFIVATG----------RSDHPNQVNNLLAFPGIMKGAVEKRSK-I 344 (388)
T ss_dssp SCS----SCEEEECCSSS--CSSCHHHHHHT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHCSC-C
T ss_pred cCC----CCEEEEcCCCC--CCCCHHHHHHh--cCeEEEeC----------CCCCCCcCCceeEcchHhHHHHhcCCc-c
Confidence 984 99999999999 99999999999 99999999 589999999999999999999999999 9
Q ss_pred CHHHHHHHHHHHHcccCccccCCCcccCCCCCchhhHHHHHHHHHHHH
Q 007703 513 HDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKA 560 (592)
Q Consensus 513 td~m~~aAA~aLA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A 560 (592)
||+|+++||++||+++ ++.++.|||++++ |+||.+||.||+++|
T Consensus 345 ~~~m~~aAa~alA~~~---~~~~~~i~P~~~~-~~v~~~vA~aVa~~A 388 (388)
T 1vl6_A 345 TKNMLLSAVEAIARSC---EPEPERIIPEAFD-MKVHLNVYTAVKGSA 388 (388)
T ss_dssp CHHHHHHHHHHHHHTS---CCBTTBSSCCTTC-HHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHhhh---ccCCCcccCCCCc-chhhHHHHHHHHhhC
Confidence 9999999999999999 6789999999999 999999999999875
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=2.9e-86 Score=709.95 Aligned_cols=384 Identities=30% Similarity=0.435 Sum_probs=348.8
Q ss_pred hhHHHhhhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceecccCCCCC
Q 007703 122 LFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGC 201 (592)
Q Consensus 122 Lfy~ll~~~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~ 201 (592)
.++++.+++.+. |||+||||||++|++|++ |++++++ |+.++++|+|||||+|||||||+|.
T Consensus 22 ~~~~~~~~~~~~-l~~~YtP~v~~~c~~~~~-------------~~~~~~~----~~~~~~~v~vvtdgt~ilGlG~iG~ 83 (439)
T 2dvm_A 22 VIPKVSLESREE-LTLAYTPGVAEPCKEIAR-------------DPGKVYE----YTSKGNLVAVVSDGSRILGLGNIGP 83 (439)
T ss_dssp EEESSCCCSHHH-HHHHSTTTTHHHHHHHHH-------------CGGGHHH----HSSGGGEEEEEECSTTBTTTBCCCH
T ss_pred EEEeeccCCHHH-CeeEECchhHHHHHHHHH-------------CHHHHHh----hcccCcEEEEEECCCeEecccceec
Confidence 456666776655 899999999999999983 6777774 8999999999999999999999999
Q ss_pred C-ccccchhhHHHHHHhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCC-eee
Q 007703 202 Q-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VLI 279 (592)
Q Consensus 202 ~-GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp~YlG~r~~R~~geeY~~~idefv~av~~~fGp~-~lI 279 (592)
+ ++|+++||++||++||||| ++|++||+.. .|||+++|+..+ |+ ..|
T Consensus 84 hS~sPvmh~ka~lf~~~gGid---~~yi~ldv~d---------------------------~de~~~~v~~l~-~~f~Gi 132 (439)
T 2dvm_A 84 LAGLPVMEGKALLFKRFGGVD---AFPIMIKEQE---------------------------PNKFIDIVKAIA-PTFGGI 132 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHCCE---EEEEECSCCS---------------------------HHHHHHHHHHTG-GGCSEE
T ss_pred cccCHHHHHHHHHHHHhCCCC---CeeeeeecCC---------------------------HHHHHHHHHHhC-ccCcEE
Confidence 7 8999999999999999999 9999999921 588888888876 55 679
Q ss_pred eeecCCCchHHHHHHHHcC--CCceeccCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHh
Q 007703 280 QFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 357 (592)
Q Consensus 280 qfEDf~~~~Af~lL~ryr~--~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~ 357 (592)
|||||..||+|++|++|++ ++||||||+||||.+.++|+++|++..|++++++|+||+|||.||.+|+.+|..
T Consensus 133 nvED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~----- 207 (439)
T 2dvm_A 133 NLEDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTE----- 207 (439)
T ss_dssp EECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHH-----
T ss_pred EEEeCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHH-----
Confidence 9999999999999999997 699999999999999999999999999999999999999999999999999986
Q ss_pred cCCChhhhcCcEEEEc----cCCcccCCCccC---CchhchhhccccC---CCCCHHHHhcccCCcEEEeccCCC-CCCC
Q 007703 358 TKAPVEETRKKICLVD----SKGLIVSSRKDS---LQHFKKPWAHEHE---PVNNLLDAVKVIKPTILIGSSGVG-RTFT 426 (592)
Q Consensus 358 ~G~s~eeA~~~i~lvD----~~GLv~~~R~~~---l~~~k~~fA~~~~---~~~~L~e~V~~vkPtvLIG~S~~~-g~Ft 426 (592)
.|++. ++||++| ++||+++. +. |.++|.+|++... ...+|.|+++. +|+|||+|+++ |+|+
T Consensus 208 ~G~~~----~~I~vvd~~~~R~G~~~~a--~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~--aDVlInaT~~~~G~~~ 279 (439)
T 2dvm_A 208 AGVKP----ENVRVVELVNGKPRILTSD--LDLEKLFPYRGWLLKKTNGENIEGGPQEALKD--ADVLISFTRPGPGVIK 279 (439)
T ss_dssp TTCCG----GGEEEEEEETTEEEECCTT--SCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTT--CSEEEECSCCCSSSSC
T ss_pred cCCCc----CeEEEEEccCCCcCccccc--cchhHHHHHHHHHhhccccccccccHHHHhcc--CCEEEEcCCCccCCCC
Confidence 38753 7999999 99999887 24 7788889987532 24689999986 89999999985 8999
Q ss_pred HHHHHHHHccCCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCcceeCCeeeCccCCcccccchhhhHHHHH
Q 007703 427 KEVIEAMASFNEVKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVI 506 (592)
Q Consensus 427 ~evv~~Ma~~~e~rPIIFaLSNPt~~aEct~e~A~~wt~G~aifAsGSPF~pV~~~G~~~~p~Q~NN~yiFPGiglG~~~ 506 (592)
+++++.|+ + +||||+||||+ +||++++|.+| |.+++||| +++.|+|+||+|+|||||+|+++
T Consensus 280 ~e~v~~m~---~-~~iVfDLynP~--~t~~~~~A~~~--G~~ivatG----------~~ml~~Q~nn~~~FPGi~~g~l~ 341 (439)
T 2dvm_A 280 PQWIEKMN---E-DAIVFPLANPV--PEILPEEAKKA--GARIVATG----------RSDYPNQINNLLGFPGIFRGALD 341 (439)
T ss_dssp HHHHTTSC---T-TCEEEECCSSS--CSSCHHHHHHH--TCSEECBS----------CSSSSSBCCGGGTHHHHHHHHHH
T ss_pred hHHHHhcC---C-CCEEEECCCCC--CcchHHHHHHc--CCeEEcCC----------CchhHHHHHHHhcccCchHHHHh
Confidence 99999887 4 99999999999 89999999998 89999999 58999999999999999999999
Q ss_pred hCCcccCHHHHHHHHHHHHcccCccccCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCccC
Q 007703 507 SGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTP 586 (592)
Q Consensus 507 s~a~~Itd~m~~aAA~aLA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~G~a~~~~~p~d~~~~i~~~m~~P 586 (592)
++|++|||+|+++||++||++++++ ..+.|||++++ |+||.+||.+|+++|+++|+|+..++|+|+.+|+++.||.+
T Consensus 342 ~~a~~i~~~m~~aaa~ala~~~~~~--~~~~i~P~~~~-~~v~~~va~av~~~a~~~g~a~~~~~~~~~~~~~~~~~~~~ 418 (439)
T 2dvm_A 342 VRARTITDSMIIAAAKAIASIVEEP--SEENIIPSPLN-PIVYAREARAVAEEAMKEGVARTKVKGEWVEEHTIRLIEFY 418 (439)
T ss_dssp TTCSCCCHHHHHHHHHHHHHTSSSC--BTTBCSCCTTC-HHHHHHHHHHHHHHHHHHTCCSSCCCHHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHhhCccc--cCCccCCCccc-chhhHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHhhhh
Confidence 9999999999999999999999876 78999999999 99999999999999999999987777899999999999987
Q ss_pred CC
Q 007703 587 VY 588 (592)
Q Consensus 587 ~Y 588 (592)
.|
T Consensus 419 ~~ 420 (439)
T 2dvm_A 419 EN 420 (439)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 8
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.87 E-value=2.3e-08 Score=107.50 Aligned_cols=169 Identities=11% Similarity=0.188 Sum_probs=125.6
Q ss_pred CCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHHHHH---------------------HHHc-------CCCcee
Q 007703 252 RATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELL---------------------AKYG-------TTHLVF 303 (592)
Q Consensus 252 R~~geeY~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~lL---------------------~ryr-------~~~~~F 303 (592)
--+.|||...++..+.. ..++|+.+| |-+..=...+- .||+ -.+|+|
T Consensus 111 g~~~~ey~~~~~~~~~~--~~~~p~~il---DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi 185 (435)
T 3gvp_A 111 GESEDDFWWCIDRCVNV--EGWQPNMIL---DDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAM 185 (435)
T ss_dssp TCCHHHHHHHHHHHHCB--TTBCCSEEE---ESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEE
T ss_pred CCCHHHHHHHHHHHHhc--cCCCCcEEE---ecchHHHHHHHHHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEE
Confidence 34668888888876642 346687666 44443222221 3443 269999
Q ss_pred ----------ccCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEc
Q 007703 304 ----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373 (592)
Q Consensus 304 ----------NDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD 373 (592)
.|++.||+-++++|+..+ ++..|.+.+++|+|+|..|.++|+.+.. .|. +++++|
T Consensus 186 ~vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~GktV~ViG~G~IGk~vA~~Lra-----~Ga-------~Viv~D 250 (435)
T 3gvp_A 186 NVNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGGKQVVVCGYGEVGKGCCAALKA-----MGS-------IVYVTE 250 (435)
T ss_dssp ECTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEC
T ss_pred EecchhhhhhhhhhhhhHHHHHHHHHHh---hCceecCCEEEEEeeCHHHHHHHHHHHH-----CCC-------EEEEEe
Confidence 899999999999999754 7999999999999999999999998864 264 588888
Q ss_pred cCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCCCC
Q 007703 374 SKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPTSQ 452 (592)
Q Consensus 374 ~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~~ 452 (592)
++.. +...|. ..-...+|.|+++. .|++|.+++..++++++.++.|.+ ..||+-.+++.
T Consensus 251 ~dp~------------ra~~A~~~G~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK~----gailINvgrg~-- 310 (435)
T 3gvp_A 251 IDPI------------CALQACMDGFRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMKN----SCIVCNMGHSN-- 310 (435)
T ss_dssp SCHH------------HHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSCT----TEEEEECSSTT--
T ss_pred CChh------------hhHHHHHcCCEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcCC----CcEEEEecCCC--
Confidence 6421 111222 11123579999985 999999999889999999999986 89999999997
Q ss_pred CCCCHHHH
Q 007703 453 SECTAEEA 460 (592)
Q Consensus 453 aEct~e~A 460 (592)
.|+..+..
T Consensus 311 ~EId~~~L 318 (435)
T 3gvp_A 311 TEIDVASL 318 (435)
T ss_dssp TTBTGGGG
T ss_pred ccCCHHHH
Confidence 78887654
No 9
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.79 E-value=1.9e-08 Score=108.31 Aligned_cols=130 Identities=17% Similarity=0.192 Sum_probs=105.5
Q ss_pred CCCcee----------ccCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcC
Q 007703 298 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 367 (592)
Q Consensus 298 ~~~~~F----------NDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~ 367 (592)
..+|+| .|+..||+-+++.|++ |.++..|.+.+++|+|.|..|.++|+.+... |.
T Consensus 171 L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~---ratg~~L~GktVgIiG~G~IG~~vA~~Lka~-----Ga------- 235 (436)
T 3h9u_A 171 LTIPAMNVNDSVTKSKFDNLYGCRESLVDGIK---RATDVMIAGKTACVCGYGDVGKGCAAALRGF-----GA------- 235 (436)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCceEeechhhhhhhhhccccchHHHHHHHH---HhcCCcccCCEEEEEeeCHHHHHHHHHHHHC-----CC-------
Confidence 579999 8999999999999996 4579999999999999999999999988653 63
Q ss_pred cEEEEccCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEec
Q 007703 368 KICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILAL 446 (592)
Q Consensus 368 ~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaL 446 (592)
+++++|++. .+...|. ..-...+|.|+++. .|++|.+++..++++++.++.|.+ ..||+-.
T Consensus 236 ~Viv~D~~p------------~~a~~A~~~G~~~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK~----gAIVINv 297 (436)
T 3h9u_A 236 RVVVTEVDP------------INALQAAMEGYQVLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMRD----DAIVCNI 297 (436)
T ss_dssp EEEEECSCH------------HHHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCCT----TEEEEEC
T ss_pred EEEEECCCh------------hhhHHHHHhCCeecCHHHHHhh--CCEEEECCCCcCccCHHHHhhcCC----CcEEEEe
Confidence 588888742 1211121 11123589999986 999999888889999999999975 9999999
Q ss_pred CCCCCCCCCCHHHHhc
Q 007703 447 SNPTSQSECTAEEAYT 462 (592)
Q Consensus 447 SNPt~~aEct~e~A~~ 462 (592)
|++. .|+.++...+
T Consensus 298 gRg~--vEID~~~L~~ 311 (436)
T 3h9u_A 298 GHFD--TEIQVAWLKA 311 (436)
T ss_dssp SSSG--GGBCHHHHHH
T ss_pred CCCC--CccCHHHHHh
Confidence 9998 8999987754
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.20 E-value=1.8e-06 Score=91.44 Aligned_cols=219 Identities=18% Similarity=0.244 Sum_probs=127.5
Q ss_pred CcchHHHHHhcCCCCCeeEEEEecCceecccCCCCCC--ccccchhhHHHHHHhcCCCCCceeeEEeecCCCchhcccCc
Q 007703 166 EKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDE 243 (592)
Q Consensus 166 d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp 243 (592)
++..+.++.++ ..+|+|.++++..+|++|.+.. |+.|..+ ..+|. | +++|.+.+-.
T Consensus 26 tP~~v~~L~~~----G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk~p~------- 83 (401)
T 1x13_A 26 TPKTVEQLLKL----GFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVNAPL------- 83 (401)
T ss_dssp CHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSSCCC-------
T ss_pred CHHHHHHHHHC----CCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeCCCC-------
Confidence 34455555554 3589999999999999998865 7888877 56665 1 4677654321
Q ss_pred ccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCC-CchHHHHHHHHcCCCceec-cCC------c----chH
Q 007703 244 FYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFA-NHNAFELLAKYGTTHLVFN-DDI------Q----GTA 311 (592)
Q Consensus 244 ~YlG~r~~R~~geeY~~~idefv~av~~~fGp~~lIqfEDf~-~~~Af~lL~ryr~~~~~FN-DDi------Q----GTa 311 (592)
.+.++.+++ ...+|.|=..+ ++..++.|.+ ..+.+|+ +.+ | .+.
T Consensus 84 -------------------~~~i~~l~~---~~~li~~~~~~~d~~~~~al~~--~gI~v~~~e~v~~~~~a~~l~~l~~ 139 (401)
T 1x13_A 84 -------------------DDEIALLNP---GTTLVSFIWPAQNPELMQKLAE--RNVTVMAMDSVPRISRAQSLDALSS 139 (401)
T ss_dssp -------------------HHHHTTCCT---TCEEEECCCGGGCHHHHHHHHH--TTCEEEEGGGCCCSGGGGGGCHHHH
T ss_pred -------------------HHHHHHhcC---CCcEEEEecCCCCHHHHHHHHH--CCCEEEEeehhhhhhhhcccchHHH
Confidence 233333322 11223222222 2223332222 4666663 222 2 455
Q ss_pred HHHHHHHHHHHHHh----CC----------CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCc
Q 007703 312 SVVLAGVVAALKLI----GG----------TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (592)
Q Consensus 312 aV~LAgll~Alr~~----g~----------~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (592)
...+|| .+|++.. ++ .+.+.+|+|+|+|.+|.++++.+.. .|. +++++|++.-
T Consensus 140 ~a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~v~D~~~~ 206 (401)
T 1x13_A 140 MANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANS-----LGA-------IVRAFDTRPE 206 (401)
T ss_dssp HHHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCGG
T ss_pred HHHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEcCCHH
Confidence 556665 3343332 22 2568999999999999999987754 262 5888988643
Q ss_pred ccCCCccCCch------------hchhhccccCC------CCCHHHHhcccCCcEEEeccCCC-----CCCCHHHHHHHH
Q 007703 378 IVSSRKDSLQH------------FKKPWAHEHEP------VNNLLDAVKVIKPTILIGSSGVG-----RTFTKEVIEAMA 434 (592)
Q Consensus 378 v~~~R~~~l~~------------~k~~fA~~~~~------~~~L~e~V~~vkPtvLIG~S~~~-----g~Ft~evv~~Ma 434 (592)
..... ..+.. .+..|++...+ ..+|.+.++. .|++|++...+ .+++++.++.|.
T Consensus 207 ~~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~mk 283 (401)
T 1x13_A 207 VKEQV-QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSMK 283 (401)
T ss_dssp GHHHH-HHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTSC
T ss_pred HHHHH-HHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC
Confidence 21100 00100 00011111000 0147777775 89999996443 678999999997
Q ss_pred ccCCCCceEEecCCCC
Q 007703 435 SFNEVKPLILALSNPT 450 (592)
Q Consensus 435 ~~~e~rPIIFaLSNPt 450 (592)
+ ..+|+-+|+|.
T Consensus 284 ~----g~vIVdva~~~ 295 (401)
T 1x13_A 284 A----GSVIVDLAAQN 295 (401)
T ss_dssp T----TCEEEETTGGG
T ss_pred C----CcEEEEEcCCC
Confidence 5 88999999873
No 11
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.82 E-value=0.00044 Score=75.06 Aligned_cols=128 Identities=16% Similarity=0.176 Sum_probs=97.5
Q ss_pred CCCcee----------ccCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcC
Q 007703 298 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 367 (592)
Q Consensus 298 ~~~~~F----------NDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~ 367 (592)
-.+|+| .|...||+-.++.|+. |.+|..|.+.+++|+|.|..|.++|+.+.. .|+
T Consensus 207 L~~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~GKTVgVIG~G~IGr~vA~~lra-----fGa------- 271 (464)
T 3n58_A 207 LPFPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAGKVAVVCGYGDVGKGSAQSLAG-----AGA------- 271 (464)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------
T ss_pred CCCCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccCCEEEEECcCHHHHHHHHHHHH-----CCC-------
Confidence 479999 5778999999888885 667999999999999999999999998754 263
Q ss_pred cEEEEccCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEec
Q 007703 368 KICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILAL 446 (592)
Q Consensus 368 ~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaL 446 (592)
+++++|.+. .....|. +.-...+|.|+++. .|+++-+++..++++++.++.|.+ ..||.-.
T Consensus 272 ~Viv~d~dp------------~~a~~A~~~G~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK~----GAILINv 333 (464)
T 3n58_A 272 RVKVTEVDP------------ICALQAAMDGFEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMKD----MCIVGNI 333 (464)
T ss_dssp EEEEECSSH------------HHHHHHHHTTCEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSCT----TEEEEEC
T ss_pred EEEEEeCCc------------chhhHHHhcCceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCCC----CeEEEEc
Confidence 688787532 1111111 11123579999986 999999988888999999999986 8888888
Q ss_pred CCCCCCCCCCHHHH
Q 007703 447 SNPTSQSECTAEEA 460 (592)
Q Consensus 447 SNPt~~aEct~e~A 460 (592)
++.. .|+..+..
T Consensus 334 GRgd--vEID~~aL 345 (464)
T 3n58_A 334 GHFD--NEIQVAAL 345 (464)
T ss_dssp SSST--TTBTCGGG
T ss_pred CCCC--cccCHHHH
Confidence 8876 56655443
No 12
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.74 E-value=7.4e-05 Score=81.60 Aligned_cols=132 Identities=15% Similarity=0.195 Sum_probs=99.9
Q ss_pred CCCcee----------ccCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcC
Q 007703 298 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 367 (592)
Q Consensus 298 ~~~~~F----------NDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~ 367 (592)
-.+|+| .|+..||+-.++.|+. |.++..|.+.+++|.|+|..|.++|+.+.. .|.
T Consensus 225 L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa-----~GA------- 289 (488)
T 3ond_A 225 LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAGKVAVVAGYGDVGKGCAAALKQ-----AGA------- 289 (488)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------
T ss_pred CCCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccCCEEEEECCCHHHHHHHHHHHH-----CCC-------
Confidence 479999 6889999999999886 789999999999999999888888887764 363
Q ss_pred cEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecC
Q 007703 368 KICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 368 ~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
+++++|++.. + .... +...-...++.++++. .|+++-.++..++++.+.++.|.. ..||+-.+
T Consensus 290 ~Viv~D~~~~----~---a~~A----a~~g~dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk~----gaiVvNaG 352 (488)
T 3ond_A 290 RVIVTEIDPI----C---ALQA----TMEGLQVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMKN----NAIVCNIG 352 (488)
T ss_dssp EEEEECSCHH----H---HHHH----HHTTCEECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSCT----TEEEEESS
T ss_pred EEEEEcCCHH----H---HHHH----HHhCCccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcCC----CeEEEEcC
Confidence 6888887421 0 1000 1111122466677764 899999998889999999988875 88999999
Q ss_pred CCCCCCCCCHHHHhcc
Q 007703 448 NPTSQSECTAEEAYTW 463 (592)
Q Consensus 448 NPt~~aEct~e~A~~w 463 (592)
++. .|...++.-.|
T Consensus 353 ~~~--~Ei~~~~l~~~ 366 (488)
T 3ond_A 353 HFD--NEIDMLGLETH 366 (488)
T ss_dssp STT--TTBTHHHHHTS
T ss_pred CCC--cccchHHHHHh
Confidence 985 78887776555
No 13
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.09 E-value=0.0055 Score=64.03 Aligned_cols=225 Identities=14% Similarity=0.146 Sum_probs=119.4
Q ss_pred cchHHHHHhcCCCCCeeEEEEecCceecccCCCCCC--ccccchhhHHHHHHhcCCCCCceeeEEeecCCC-----chhc
Q 007703 167 KGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLALYTALGGIRPSACLPITVDVGTN-----NEQL 239 (592)
Q Consensus 167 ~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTn-----Ne~L 239 (592)
+..+.++.+. ..+|+|.++++.-.|+.|.... |..|..++-.++ ++.| |+|.+.+- +++.
T Consensus 20 P~~v~~L~~~----G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~ad------iil~v~~p~~~~~~~~~ 86 (384)
T 1l7d_A 20 PEVVKKLVGL----GFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQAD------VVWKVQRPMTAEEGTDE 86 (384)
T ss_dssp HHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSCS------EEEEEECCCCGGGSCCG
T ss_pred HHHHHHHHhC----CCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCCC------EEEEecCcccccCCHHH
Confidence 3445555443 5689999999999999997754 777777766665 3333 66666543 1111
Q ss_pred ---c-cCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHHHHHHHHcCCCceeccCCcchHHHHH
Q 007703 240 ---L-KDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVL 315 (592)
Q Consensus 240 ---L-~Dp~YlG~r~~R~~geeY~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~lL~ryr~~~~~FNDDiQGTaaV~L 315 (592)
+ ..-.+++.-+.-. + .+.++++.++ |- .++.+|-.....+ ...+++|+ ....+
T Consensus 87 i~~l~~~~~~i~~~~~~~-----~---~~~~~~~~~~-gi-~~~~~e~~~~~~~-------~~~l~~l~------~~a~~ 143 (384)
T 1l7d_A 87 VALIKEGAVLMCHLGALT-----N---RPVVEALTKR-KI-TAYAMELMPRISR-------AQSMDILS------SQSNL 143 (384)
T ss_dssp GGGSCTTCEEEEECCGGG-----C---HHHHHHHHHT-TC-EEEEGGGCCCSGG-------GGGGCHHH------HHHHH
T ss_pred HHhhccCCEEEEEecccC-----C---HHHHHHHHHC-CC-EEEEecccccccc-------ccccchhh------HHHHH
Confidence 1 1122333333211 1 1112222221 12 1223322211000 00112222 11122
Q ss_pred H---HHHHHHHHhCC----------CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCC
Q 007703 316 A---GVVAALKLIGG----------TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 382 (592)
Q Consensus 316 A---gll~Alr~~g~----------~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R 382 (592)
| +++.+.+..++ .+.+.+++|+|+|.+|.+++..+.. .|. +++++|++.- |
T Consensus 144 ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~~~d~~~~----~ 207 (384)
T 1l7d_A 144 AGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKR-----LGA-------VVMATDVRAA----T 207 (384)
T ss_dssp HHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCST----T
T ss_pred HHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCCHH----H
Confidence 3 45556665553 6789999999999999999887754 362 4888997532 1
Q ss_pred ccCCchhc-----------------hhhccccC------CCCCHHHHhcccCCcEEEeccCC-----CCCCCHHHHHHHH
Q 007703 383 KDSLQHFK-----------------KPWAHEHE------PVNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMA 434 (592)
Q Consensus 383 ~~~l~~~k-----------------~~fA~~~~------~~~~L~e~V~~vkPtvLIG~S~~-----~g~Ft~evv~~Ma 434 (592)
.+.+..+- -.|++... ....|.+.++. .|++|.++.. +.+++++.++.|.
T Consensus 208 ~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~mk 285 (384)
T 1l7d_A 208 KEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTKMK 285 (384)
T ss_dssp HHHHHHTTCEECCC-----------------------CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTSC
T ss_pred HHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC
Confidence 10000000 01111100 00127777764 9999998832 3468999999987
Q ss_pred ccCCCCceEEecCCC
Q 007703 435 SFNEVKPLILALSNP 449 (592)
Q Consensus 435 ~~~e~rPIIFaLSNP 449 (592)
+ ..+|+-+|-+
T Consensus 286 ~----g~vivdva~~ 296 (384)
T 1l7d_A 286 P----GSVIIDLAVE 296 (384)
T ss_dssp T----TCEEEETTGG
T ss_pred C----CCEEEEEecC
Confidence 4 7889988864
No 14
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.93 E-value=0.00082 Score=71.84 Aligned_cols=110 Identities=17% Similarity=0.221 Sum_probs=71.4
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCc--------------hhchhh
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ--------------HFKKPW 393 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~--------------~~k~~f 393 (592)
.+...|++|+|+|.+|..+|+.+... |. +++++|++.-......+ +- .-+..|
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~y 253 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRL-----GA-------VVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGY 253 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSTTHHHHHHH-TTCEECCCCC------------
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEcCCHHHHHHHHH-cCCceeecccccccccccccch
Confidence 46789999999999999999987642 62 68899987532111000 00 001124
Q ss_pred ccccCC------CCCHHHHhcccCCcEEEeccCC-----CCCCCHHHHHHHHccCCCCceEEecCC-CCCCCCCC
Q 007703 394 AHEHEP------VNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMASFNEVKPLILALSN-PTSQSECT 456 (592)
Q Consensus 394 A~~~~~------~~~L~e~V~~vkPtvLIG~S~~-----~g~Ft~evv~~Ma~~~e~rPIIFaLSN-Pt~~aEct 456 (592)
++...+ ..+|.|+++. .|++|++... +.+||+++++.|.+ ..+|+-+|- |-...|+|
T Consensus 254 a~e~s~~~~~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk~----GsVIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 254 AKEMSGEYQVKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMKP----GSVVVDLAVERGGNIEGA 322 (405)
T ss_dssp -----CHHHHHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSCT----TCEEEETTGGGTCSBTTC
T ss_pred hhhcchhhhhhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCCC----CCEEEEEeCCCCCCcccc
Confidence 432111 1378999986 9999998543 35899999999986 999999995 33445554
No 15
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.56 E-value=0.039 Score=59.40 Aligned_cols=178 Identities=19% Similarity=0.185 Sum_probs=125.8
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHH-H-HHHHHc---CC--Ccee----------ccCCcchHHHHH
Q 007703 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF-E-LLAKYG---TT--HLVF----------NDDIQGTASVVL 315 (592)
Q Consensus 253 ~~geeY~~~idefv~av~~~fGp~~lIqfEDf~~~~Af-~-lL~ryr---~~--~~~F----------NDDiQGTaaV~L 315 (592)
.+..|-..|...|++++.+.-||+.-|-=+|++..-.. . +.+.|+ .. -.++ .+--.-||-=+.
T Consensus 126 ~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv~ 205 (424)
T 3k92_A 126 MSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGVT 205 (424)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHHH
Confidence 45567778899999999999999888888999874222 2 456664 21 1122 233455888888
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhc-hhhc
Q 007703 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK-KPWA 394 (592)
Q Consensus 316 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k-~~fA 394 (592)
.++-.+++..|.+|++.||+|-|.|..|...|++|.+. |. +-+-+.|++|-|++.. .|+... +.+.
T Consensus 206 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~--GlD~~~l~~~~ 272 (424)
T 3k92_A 206 ICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPD--GLDIPYLLDKR 272 (424)
T ss_dssp HHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTT--CCCHHHHHHHC
T ss_pred HHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHH
Confidence 88999999999999999999999999999999998763 53 4467999999999764 343321 1121
Q ss_pred cccC-------CCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCC-CC
Q 007703 395 HEHE-------PVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSN-PT 450 (592)
Q Consensus 395 ~~~~-------~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSN-Pt 450 (592)
.... ..-+-.+ +-.++.|+||=+..+ +..|++-++.+ . -.+|.--+| |+
T Consensus 273 ~~~g~i~~~~a~~~~~~~-i~~~~~DIliPcA~~-n~I~~~~a~~l----~-ak~V~EgAN~p~ 329 (424)
T 3k92_A 273 DSFGMVTNLFTDVITNEE-LLEKDCDILVPAAIS-NQITAKNAHNI----Q-ASIVVERANGPT 329 (424)
T ss_dssp CSSSCCGGGCSCCBCHHH-HHHSCCSEEEECSCS-SCBCTTTGGGC----C-CSEEECCSSSCB
T ss_pred HHhCCCCCCCcEEecCcc-ceeccccEEeecCcc-cccChhhHhhc----C-ceEEEcCCCCCC
Confidence 1111 1112233 345789999987774 79999888776 3 678888888 65
No 16
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.52 E-value=0.021 Score=61.40 Aligned_cols=186 Identities=15% Similarity=0.140 Sum_probs=126.9
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHH--HHHHHHcC---C--Ccee----------ccCCcchHHHHH
Q 007703 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYGT---T--HLVF----------NDDIQGTASVVL 315 (592)
Q Consensus 253 ~~geeY~~~idefv~av~~~fGp~~lIqfEDf~~~~Af--~lL~ryr~---~--~~~F----------NDDiQGTaaV~L 315 (592)
.+..|-..|...|++++.+.-||..-|-=+|++..-.. -+.+.|+. . -.++ .+.-.-||-=+.
T Consensus 123 ~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 202 (419)
T 3aoe_E 123 LSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGAL 202 (419)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHH
Confidence 35567778899999999999999999999999875321 24556632 1 1122 223344777777
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEE-EEccCCcccCCCccCCchhch-hh
Q 007703 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHFKK-PW 393 (592)
Q Consensus 316 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~-lvD~~GLv~~~R~~~l~~~k~-~f 393 (592)
-++-.+++..|.+|++.||+|-|.|..|...|++|.+ .| -+++ +.|++|-|++... |+..+. .+
T Consensus 203 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~-----~G-------akVVavsD~~G~i~dp~G--ld~~~l~~~ 268 (419)
T 3aoe_E 203 LVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAER-----LG-------MRVVAVATSMGGMYAPEG--LDVAEVLSA 268 (419)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEEETTEEEECTTC--CCHHHHHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CC-------CEEEEEEcCCCeEECCCC--CCHHHHHHH
Confidence 7888889999999999999999999999999998865 36 3555 9999999987643 433221 11
Q ss_pred ccccCCCC----CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCC-CCCCCCCCHHHHhc
Q 007703 394 AHEHEPVN----NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSN-PTSQSECTAEEAYT 462 (592)
Q Consensus 394 A~~~~~~~----~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSN-Pt~~aEct~e~A~~ 462 (592)
........ +- +-+-.++.|+|+=++. ++..|++-.+.+ . -.||.--+| |++ +| +++.+.
T Consensus 269 ~~~~g~v~~~~~~~-~e~~~~~~DVliP~A~-~n~i~~~~A~~l----~-ak~V~EgAN~p~t-~~--A~~~L~ 332 (419)
T 3aoe_E 269 YEATGSLPRLDLAP-EEVFGLEAEVLVLAAR-EGALDGDRARQV----Q-AQAVVEVANFGLN-PE--AEAYLL 332 (419)
T ss_dssp HHHHSSCSCCCBCT-TTGGGSSCSEEEECSC-TTCBCHHHHTTC----C-CSEEEECSTTCBC-HH--HHHHHH
T ss_pred HHhhCCcceeeccc-hhhhccCceEEEeccc-ccccccchHhhC----C-ceEEEECCCCcCC-HH--HHHHHH
Confidence 11111010 00 1234578999998775 679999888776 3 678988888 663 33 444443
No 17
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.47 E-value=0.15 Score=55.24 Aligned_cols=183 Identities=16% Similarity=0.115 Sum_probs=125.2
Q ss_pred CCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchH-----HHHHHHHcCCC-cee----------ccCCcchHHHHH
Q 007703 252 RATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA-----FELLAKYGTTH-LVF----------NDDIQGTASVVL 315 (592)
Q Consensus 252 R~~geeY~~~idefv~av~~~fGp~~lIqfEDf~~~~A-----f~lL~ryr~~~-~~F----------NDDiQGTaaV~L 315 (592)
..+..|-..|...||..+.+..||+.=|--.|+...-- +...++++... .|| .+.-.-||-=+.
T Consensus 140 ~~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv~ 219 (450)
T 4fcc_A 140 GKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLV 219 (450)
T ss_dssp TCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeHH
Confidence 35667888899999999999999999999999975432 23333443322 233 233344777778
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc
Q 007703 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (592)
Q Consensus 316 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~ 395 (592)
-++-.+++..|.+|++.||+|-|.|..|...|+.|.+ .|. +=+-+-|++|-|++.. .|+..+.....
T Consensus 220 ~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e-----~Ga------kvVavsD~~G~i~d~~--Gid~e~l~~l~ 286 (450)
T 4fcc_A 220 YFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAME-----FGA------RVITASDSSGTVVDES--GFTKEKLARLI 286 (450)
T ss_dssp HHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHH-----TTC------EEEEEEETTEEEECTT--CCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHh-----cCC------eEEEEecCCceEEeCC--CCCHHHHHHHH
Confidence 8888999999999999999999999999999998875 363 4566788999888653 35443321111
Q ss_pred c--cCCCCCHHH-------------HhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCC-CC
Q 007703 396 E--HEPVNNLLD-------------AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSN-PT 450 (592)
Q Consensus 396 ~--~~~~~~L~e-------------~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSN-Pt 450 (592)
+ ......+.+ -+-.++.|||+=+.. ++..|++-++.+.+. . -.+|.-=+| |+
T Consensus 287 e~k~~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl-~~~I~~~~a~~L~a~-g-~k~IaEgAN~p~ 354 (450)
T 4fcc_A 287 EIKSSRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCAT-QNELDVDAAHQLIAN-G-VKAVAEGANMPT 354 (450)
T ss_dssp HHHTSTTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSC-TTCBCHHHHHHHHHT-T-CCEEECCSSSCB
T ss_pred HHhcccCCccccccccCCcEEecCcccccCCccEEeeccc-cccccHHHHHHHHhc-C-ceEEecCCCCCC
Confidence 0 000011111 133468999998877 569999999998641 1 246766677 65
No 18
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.40 E-value=0.003 Score=67.02 Aligned_cols=104 Identities=22% Similarity=0.200 Sum_probs=66.8
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCcc------CCc---hhchhhcccc--
Q 007703 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD------SLQ---HFKKPWAHEH-- 397 (592)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~------~l~---~~k~~fA~~~-- 397 (592)
+...|++|+|+|.+|..+|+.+... |. +++++|++.-....-.+ .+. .-...|++..
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~ 249 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSE 249 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSGGGHHHHHHTTCEECCCC-------------CH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhH
Confidence 5789999999999999999988653 63 58899987421100000 000 0001122110
Q ss_pred ----CCCCCHHHHhcccCCcEEEeccCC-----CCCCCHHHHHHHHccCCCCceEEecCCCC
Q 007703 398 ----EPVNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 398 ----~~~~~L~e~V~~vkPtvLIG~S~~-----~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
....+|.++++. .|++|++... +.+||+++++.|.+ ..+|+-+|=+.
T Consensus 250 ~~~~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mkp----GsVIVDvA~d~ 305 (381)
T 3p2y_A 250 AERAQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQP----GSVVVDLAGET 305 (381)
T ss_dssp HHHHHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSCT----TCEEEETTGGG
T ss_pred HHHhhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCCC----CcEEEEEeCCC
Confidence 012368888876 9999997533 35799999999986 89999998544
No 19
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.36 E-value=0.02 Score=57.40 Aligned_cols=121 Identities=17% Similarity=0.201 Sum_probs=79.2
Q ss_pred hHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchh
Q 007703 310 TASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF 389 (592)
Q Consensus 310 TaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~ 389 (592)
+-+|+=.++..++...|..+.+.+++|+|+|..|..+|+.+.. .|. +++.+|+.. .+ +...
T Consensus 134 ~~svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~-----~G~-------~V~~~dr~~----~~---~~~~ 194 (293)
T 3d4o_A 134 SIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFAA-----LGA-------KVKVGARES----DL---LARI 194 (293)
T ss_dssp HHHHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSH----HH---HHHH
T ss_pred cHhHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHHH
Confidence 4455555555566677889999999999999999999998754 253 688888742 11 1111
Q ss_pred chhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecC-CCCCCCCCCHHHH
Q 007703 390 KKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALS-NPTSQSECTAEEA 460 (592)
Q Consensus 390 k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLS-NPt~~aEct~e~A 460 (592)
+ .+--..-...+|.++++. .|++|-... .+.++++.++.|.+ ..+|+=+| +|. ++..+.+
T Consensus 195 ~-~~g~~~~~~~~l~~~l~~--aDvVi~~~p-~~~i~~~~l~~mk~----~~~lin~ar~~~---~~~~~~a 255 (293)
T 3d4o_A 195 A-EMGMEPFHISKAAQELRD--VDVCINTIP-ALVVTANVLAEMPS----HTFVIDLASKPG---GTDFRYA 255 (293)
T ss_dssp H-HTTSEEEEGGGHHHHTTT--CSEEEECCS-SCCBCHHHHHHSCT----TCEEEECSSTTC---SBCHHHH
T ss_pred H-HCCCeecChhhHHHHhcC--CCEEEECCC-hHHhCHHHHHhcCC----CCEEEEecCCCC---CCCHHHH
Confidence 1 010000011368888864 999997654 57999999988864 77888888 454 3445444
No 20
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.82 E-value=0.018 Score=59.36 Aligned_cols=96 Identities=17% Similarity=0.231 Sum_probs=76.7
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCc
Q 007703 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (592)
Q Consensus 309 GTaaV~LAgll~Alr~~g~~l~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~ 387 (592)
+-.-+|-.|++-.++..+.++...++||+|+| ..|.-+|.++... | .++.+++++
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 198 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK------------ 198 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT------------
T ss_pred CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC------------
Confidence 34457788899999999999999999999999 5799999888652 4 358888743
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCC
Q 007703 388 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNP 449 (592)
Q Consensus 388 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNP 449 (592)
..+|.+.++. .|++|+..+.++.+|+++|+ + --+|+=++-|
T Consensus 199 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~-GavVIDVgi~ 239 (301)
T 1a4i_A 199 ------------TAHLDEEVNK--GDILVVATGQPEMVKGEWIK------P-GAIVIDCGIN 239 (301)
T ss_dssp ------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------T-TCEEEECCCB
T ss_pred ------------cccHHHHhcc--CCEEEECCCCcccCCHHHcC------C-CcEEEEccCC
Confidence 1468899986 99999999999999999875 3 5566666644
No 21
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=95.78 E-value=0.53 Score=51.12 Aligned_cols=190 Identities=16% Similarity=0.176 Sum_probs=128.9
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHHH--HHHHHc---CCCc-ee----------ccCCcchHHHHHH
Q 007703 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE--LLAKYG---TTHL-VF----------NDDIQGTASVVLA 316 (592)
Q Consensus 253 ~~geeY~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~--lL~ryr---~~~~-~F----------NDDiQGTaaV~LA 316 (592)
.+..|...|-..||..+.+.+||..=|-=+|++..-... +.+.|+ ...+ |+ ..--.-||-=+.-
T Consensus 145 ~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~ 224 (456)
T 3r3j_A 145 KSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVY 224 (456)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHH
Confidence 356677888888999998888999999999998643222 445554 2221 11 1122346777777
Q ss_pred HHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchh----
Q 007703 317 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP---- 392 (592)
Q Consensus 317 gll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~---- 392 (592)
++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+.+.|++|-|++.. .|+..+..
T Consensus 225 ~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~--Gld~~~l~~~~~ 291 (456)
T 3r3j_A 225 FAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN--GFTKEQLNYIMD 291 (456)
T ss_dssp HHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHHH
Confidence 8888899999999999999999999999999988763 53 3345899999988754 34432211
Q ss_pred -----------hccccCCCC--CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCC-CCCCCCCCHH
Q 007703 393 -----------WAHEHEPVN--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSN-PTSQSECTAE 458 (592)
Q Consensus 393 -----------fA~~~~~~~--~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSN-Pt~~aEct~e 458 (592)
|+...+... +- +-+-.++.|+||=+.. ++..|++-++.+-+ +. -+||.--+| |++ +| ++
T Consensus 292 ~k~~~~~~v~~~~~~~~~a~~v~~-~~i~~~~~DI~iPcA~-~~~I~~~na~~l~~-~~-ak~V~EgAN~p~T-~e--A~ 364 (456)
T 3r3j_A 292 IKNNQRLRLKEYLKYSKTAKYFEN-QKPWNIPCDIAFPCAT-QNEINENDADLFIQ-NK-CKMIVEGANMPTH-IK--AL 364 (456)
T ss_dssp HHHTSCCCGGGGGGTCSSCEEECS-CCGGGSCCSEEEECSC-TTCBCHHHHHHHHH-HT-CCEEECCSSSCBC-TT--HH
T ss_pred HHHhcCcchhhhhhcCCCceEeCC-ccccccCccEEEeCCC-ccchhhHHHHHHHh-cC-CeEEEecCCCCCC-HH--HH
Confidence 111001000 01 1233568999998877 67999999999843 13 678888888 764 44 55
Q ss_pred HHhc
Q 007703 459 EAYT 462 (592)
Q Consensus 459 ~A~~ 462 (592)
+.+.
T Consensus 365 ~iL~ 368 (456)
T 3r3j_A 365 HKLK 368 (456)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 22
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=95.72 E-value=0.02 Score=57.91 Aligned_cols=88 Identities=15% Similarity=0.199 Sum_probs=59.3
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhc
Q 007703 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (592)
Q Consensus 315 LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA 394 (592)
-.|++.+++..+.++++.+++|+|||.+|.+++..+.. .|. ++|+++|+. .++ .....+.+.
T Consensus 111 ~~G~~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~-----~G~------~~v~i~~R~----~~~---a~~la~~~~ 172 (283)
T 3jyo_A 111 VSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVT-----HGV------QKLQVADLD----TSR---AQALADVIN 172 (283)
T ss_dssp HHHHHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSS----HHH---HHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEECC----HHH---HHHHHHHHH
Confidence 46788999988889999999999999777777666654 365 679988874 121 112222222
Q ss_pred cc-------cCCCCCHHHHhcccCCcEEEeccCCC
Q 007703 395 HE-------HEPVNNLLDAVKVIKPTILIGSSGVG 422 (592)
Q Consensus 395 ~~-------~~~~~~L~e~V~~vkPtvLIG~S~~~ 422 (592)
.. .-+..+|.++++. +|++|-++..|
T Consensus 173 ~~~~~~~i~~~~~~~l~~~l~~--~DiVInaTp~G 205 (283)
T 3jyo_A 173 NAVGREAVVGVDARGIEDVIAA--ADGVVNATPMG 205 (283)
T ss_dssp HHHTSCCEEEECSTTHHHHHHH--SSEEEECSSTT
T ss_pred hhcCCceEEEcCHHHHHHHHhc--CCEEEECCCCC
Confidence 11 1123478888876 89999887754
No 23
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.60 E-value=0.028 Score=57.54 Aligned_cols=83 Identities=19% Similarity=0.265 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchh
Q 007703 311 ASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF 389 (592)
Q Consensus 311 aaV~LAgll~Alr~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~ 389 (592)
.-+|-.|++..++..+.+|++.++|++|+|. .|..+|.+|... |. .+.+++|+
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~-------------- 194 (285)
T 3l07_A 141 ESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-----KA-------TVTTCHRF-------------- 194 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT--------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC--------------
Confidence 3467778899999999999999999999976 899999988652 52 47777652
Q ss_pred chhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHH
Q 007703 390 KKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIE 431 (592)
Q Consensus 390 k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~ 431 (592)
..+|.+.++. +|++|...+.++.++.++|+
T Consensus 195 ----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 224 (285)
T 3l07_A 195 ----------TTDLKSHTTK--ADILIVAVGKPNFITADMVK 224 (285)
T ss_dssp ----------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC
T ss_pred ----------chhHHHhccc--CCEEEECCCCCCCCCHHHcC
Confidence 1368899986 99999999999999998873
No 24
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.59 E-value=0.18 Score=54.59 Aligned_cols=176 Identities=16% Similarity=0.166 Sum_probs=121.1
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHHH---HHHHHcC---C--Ccee----------ccCCcchHHHH
Q 007703 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYGT---T--HLVF----------NDDIQGTASVV 314 (592)
Q Consensus 253 ~~geeY~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~---lL~ryr~---~--~~~F----------NDDiQGTaaV~ 314 (592)
.+..|-..|...|++++.+.-||..-|-=+|++.. ..+ +.+.|+. . -.++ .+.-.-||-=+
T Consensus 140 ~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~-~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv 218 (440)
T 3aog_A 140 LSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTG-EREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGV 218 (440)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCC-HHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHH
Confidence 34567778899999999999999999999999874 222 5556632 1 1222 23334476666
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEE-EEccCCcccCCCccCCchhch-h
Q 007703 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHFKK-P 392 (592)
Q Consensus 315 LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~-lvD~~GLv~~~R~~~l~~~k~-~ 392 (592)
.-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .| -+++ +.|++|-|++... |+..+. .
T Consensus 219 ~~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e-----~G-------akvVavsD~~G~i~dp~G--ld~~~l~~ 284 (440)
T 3aog_A 219 FITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHD-----HG-------ARVVAVQDHTGTVYNEAG--IDPYDLLR 284 (440)
T ss_dssp HHHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEECSSCEEECTTC--CCHHHHHH
T ss_pred HHHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHH-----CC-------CEEEEEEcCCcEEECCCC--CCHHHHHH
Confidence 77788889999999999999999999999999998865 25 3444 9999999987653 322211 1
Q ss_pred hccccCC--------CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCC-CC
Q 007703 393 WAHEHEP--------VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSN-PT 450 (592)
Q Consensus 393 fA~~~~~--------~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSN-Pt 450 (592)
+...... .-+-.+ +-.++.|+||=++. ++..|.+-++.+ . -.+|.--+| |+
T Consensus 285 ~~~~~g~i~~y~~a~~i~~~e-i~~~~~DIlvPcA~-~n~i~~~na~~l----~-ak~VvEgAN~p~ 344 (440)
T 3aog_A 285 HVQEFGGVRGYPKAEPLPAAD-FWGLPVEFLVPAAL-EKQITEQNAWRI----R-ARIVAEGANGPT 344 (440)
T ss_dssp HHHHTSSSTTCTTSEECCHHH-HTTCCCSEEEECSS-SSCBCTTTGGGC----C-CSEEECCSSSCB
T ss_pred HHHhcCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccchhhHHHc----C-CcEEEecCcccc
Confidence 1111100 012334 44578999997766 568888877766 3 667777777 65
No 25
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=95.52 E-value=0.13 Score=55.18 Aligned_cols=178 Identities=15% Similarity=0.208 Sum_probs=111.3
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHH--HHHHHHc---CCC---cee----------ccCCcchHHHH
Q 007703 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYG---TTH---LVF----------NDDIQGTASVV 314 (592)
Q Consensus 253 ~~geeY~~~idefv~av~~~fGp~~lIqfEDf~~~~Af--~lL~ryr---~~~---~~F----------NDDiQGTaaV~ 314 (592)
.+..|-..|...|++++.+.-||..-|-=+|++..-.. -+.+.|+ ... .++ .+.-.-||-=+
T Consensus 116 ~s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv 195 (421)
T 2yfq_A 116 LSERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGV 195 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHH
Confidence 34567778899999999999999999999999975221 2556664 211 222 12223466666
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEE-EEccC-----CcccCCCccCCch
Q 007703 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSK-----GLIVSSRKDSLQH 388 (592)
Q Consensus 315 LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~-lvD~~-----GLv~~~R~~~l~~ 388 (592)
.-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .|. +++ +.|++ |-|++... |+.
T Consensus 196 ~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~-----~Ga-------kvVavsD~~~~~~~G~i~d~~G--ld~ 261 (421)
T 2yfq_A 196 AVVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIER-----QGG-------KVCAIAEWDRNEGNYALYNENG--IDF 261 (421)
T ss_dssp HHHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHH-----TTC-------CEEECCBCCSSSCSBCCBCSSC--CCH
T ss_pred HHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEEecCCCccceEEECCCC--CCH
Confidence 66788889999999999999999999999999998865 363 444 89999 99997643 432
Q ss_pred hch-hhccccCCCCC------H-HHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCC-CC
Q 007703 389 FKK-PWAHEHEPVNN------L-LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSN-PT 450 (592)
Q Consensus 389 ~k~-~fA~~~~~~~~------L-~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSN-Pt 450 (592)
... .+......... + .+.+-.++.|+||=++. ++..|++-.+.+ . -.+|.-=+| |+
T Consensus 262 ~~l~~~~~~~g~i~~~~~a~~i~~~~~~~~~~DIliP~A~-~n~i~~~~A~~l----~-ak~VvEgAN~P~ 326 (421)
T 2yfq_A 262 KELLAYKEANKTLIGFPGAERITDEEFWTKEYDIIVPAAL-ENVITGERAKTI----N-AKLVCEAANGPT 326 (421)
T ss_dssp HHHHHHHHHHCC---------------------CEEECSC-SSCSCHHHHTTC----C-CSEEECCSSSCS
T ss_pred HHHHHHHHhcCCcccCCCceEeCccchhcCCccEEEEcCC-cCcCCcccHHHc----C-CeEEEeCCcccc
Confidence 211 11111111000 0 01223456777776654 567777777665 2 556666666 54
No 26
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=95.27 E-value=0.28 Score=53.45 Aligned_cols=179 Identities=15% Similarity=0.165 Sum_probs=120.5
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHH--HHHHHHcC---C-Ccee----------ccCCcchHHHHHHH
Q 007703 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYGT---T-HLVF----------NDDIQGTASVVLAG 317 (592)
Q Consensus 254 ~geeY~~~idefv~av~~~fGp~~lIqfEDf~~~~Af--~lL~ryr~---~-~~~F----------NDDiQGTaaV~LAg 317 (592)
+..|...|-..||..+.+..||..=|-=+|++..-.. -+.+.|+. . ..|+ .++-.-||-=+.-+
T Consensus 159 S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~ 238 (470)
T 2bma_A 159 SDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYF 238 (470)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHH
Confidence 4566777888899999988899988899999874221 14456542 1 1111 11223466666677
Q ss_pred HHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEE-EEccCCcccCCCccCCchh-------
Q 007703 318 VVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHF------- 389 (592)
Q Consensus 318 ll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~-lvD~~GLv~~~R~~~l~~~------- 389 (592)
+-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +++ +.|++|-|++.. .|+..
T Consensus 239 ~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~G~i~dp~--Gid~edl~~l~~ 304 (470)
T 2bma_A 239 VLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHL-----NV-------KVLTLSDSNGYVYEPN--GFTHENLEFLID 304 (470)
T ss_dssp HHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHT-----TC-------EECEEEETTEEEECSS--CCCHHHHHHHHH
T ss_pred HHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEEeCCceEECCC--CCCHHHHHHHHH
Confidence 888899999999999999999999999999988653 53 444 888888888653 34222
Q ss_pred -c-------hhhccccCCCC--CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCC-CC
Q 007703 390 -K-------KPWAHEHEPVN--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSN-PT 450 (592)
Q Consensus 390 -k-------~~fA~~~~~~~--~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSN-Pt 450 (592)
| ..|+...+... +-.+.. .++.|+||=+.. ++..|++-++.+-+ +. -.+|.--+| |+
T Consensus 305 ~k~~~~g~v~~~~~~~~~a~~v~~~~~~-~~~~DI~iPcA~-~~~I~~~na~~l~~-~~-ak~V~EgAN~p~ 372 (470)
T 2bma_A 305 LKEEKKGRIKEYLNHSSTAKYFPNEKPW-GVPCTLAFPCAT-QNDVDLDQAKLLQK-NG-CILVGEGANMPS 372 (470)
T ss_dssp HHTTTTCCGGGGGGTCSSCEECSSCCTT-SSCCSEEEECSS-TTCBCSHHHHHHHH-TT-CCEEECCSSSCB
T ss_pred HHHhcCCcHHHHHhhcCCcEEecCcCee-ecCccEEEeccc-cCcCCHHHHHHHHh-cC-cEEEEeCCCCCC
Confidence 1 12221100000 001222 568999998875 67999999999854 34 678888888 65
No 27
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.20 E-value=0.047 Score=55.95 Aligned_cols=84 Identities=17% Similarity=0.245 Sum_probs=69.3
Q ss_pred hHHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCch
Q 007703 310 TASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (592)
Q Consensus 310 TaaV~LAgll~Alr~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~ 388 (592)
-.-+|-.|++..++..+.+|++.++|++|+|. .|..+|.+|... |. .+.+++++
T Consensus 139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~-----gA-------tVtv~h~~------------- 193 (285)
T 3p2o_A 139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-----GA-------TVSVCHIK------------- 193 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 34577888999999999999999999999876 899999988752 52 47777652
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHH
Q 007703 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIE 431 (592)
Q Consensus 389 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~ 431 (592)
..+|.+.++. +|++|...+.++.++.++|+
T Consensus 194 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 223 (285)
T 3p2o_A 194 -----------TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK 223 (285)
T ss_dssp -----------CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC
T ss_pred -----------chhHHHHhhc--CCEEEECCCCCCcCCHHHcC
Confidence 1368888986 99999999999999998873
No 28
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.11 E-value=0.11 Score=51.92 Aligned_cols=98 Identities=16% Similarity=0.256 Sum_probs=65.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 410 (592)
..||.|+|+|..|.++|..+... |.. ..+++++|++ . +.+...++.| ......++.|+++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-----g~~----~~~V~v~dr~----~---~~~~~l~~~~--gi~~~~~~~~~~~~- 63 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-----GYD----PNRICVTNRS----L---DKLDFFKEKC--GVHTTQDNRQGALN- 63 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-----TCC----GGGEEEECSS----S---HHHHHHHHTT--CCEEESCHHHHHSS-
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-----CCC----CCeEEEEeCC----H---HHHHHHHHHc--CCEEeCChHHHHhc-
Confidence 46899999999999999988753 643 2478988874 1 1122222221 11112578899875
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcc--CCCCceEEecCCCCC
Q 007703 411 KPTILIGSSGVGRTFTKEVIEAMASF--NEVKPLILALSNPTS 451 (592)
Q Consensus 411 kPtvLIG~S~~~g~Ft~evv~~Ma~~--~e~rPIIFaLSNPt~ 451 (592)
+|++| ++..+ -..+++++.+..+ .+ +.+|...++..+
T Consensus 64 -aDvVi-lav~p-~~~~~vl~~l~~~~l~~-~~iiiS~~agi~ 102 (280)
T 3tri_A 64 -ADVVV-LAVKP-HQIKMVCEELKDILSET-KILVISLAVGVT 102 (280)
T ss_dssp -CSEEE-ECSCG-GGHHHHHHHHHHHHHTT-TCEEEECCTTCC
T ss_pred -CCeEE-EEeCH-HHHHHHHHHHHhhccCC-CeEEEEecCCCC
Confidence 78877 44444 4568899988865 45 768888888774
No 29
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.10 E-value=0.045 Score=55.85 Aligned_cols=81 Identities=11% Similarity=0.231 Sum_probs=66.5
Q ss_pred hHHHHHHHHHHHHHHhCCCcccceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCch
Q 007703 310 TASVVLAGVVAALKLIGGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (592)
Q Consensus 310 TaaV~LAgll~Alr~~g~~l~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~ 388 (592)
-.-+|-.|++..++..+ |++.++|++|+| ..|..+|.++... | -.+.+++++
T Consensus 131 ~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~-----g-------AtVtv~~~~------------- 183 (276)
T 3ngx_A 131 LVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNR-----N-------YTVSVCHSK------------- 183 (276)
T ss_dssp SCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT-------------
T ss_pred CCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHC-----C-------CeEEEEeCC-------------
Confidence 34567789999999998 999999999998 4899999988752 5 357777652
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHH
Q 007703 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVI 430 (592)
Q Consensus 389 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv 430 (592)
..+|.+.++. .|++|...+.++.++++++
T Consensus 184 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~v 212 (276)
T 3ngx_A 184 -----------TKDIGSMTRS--SKIVVVAVGRPGFLNREMV 212 (276)
T ss_dssp -----------CSCHHHHHHH--SSEEEECSSCTTCBCGGGC
T ss_pred -----------cccHHHhhcc--CCEEEECCCCCccccHhhc
Confidence 1468899987 9999999999988888776
No 30
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.03 E-value=0.041 Score=56.47 Aligned_cols=95 Identities=16% Similarity=0.170 Sum_probs=74.5
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCc
Q 007703 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (592)
Q Consensus 309 GTaaV~LAgll~Alr~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~ 387 (592)
+-.-+|-.|++-.++..+.+++..++||+|+|. .|.-+|.++.. .| ..+.+++++
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~-----~g-------AtVtv~hs~------------ 192 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLL-----AG-------CTTTVTHRF------------ 192 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHT-----TT-------CEEEEECSS------------
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHH-----CC-------CeEEEEeCC------------
Confidence 445677888999999999999999999999995 69999988764 24 457778642
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCC
Q 007703 388 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSN 448 (592)
Q Consensus 388 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSN 448 (592)
..+|.+.++. .|++|+..+.++.+|+++|+ + .-+|+=++-
T Consensus 193 ------------t~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk------~-GavVIDVgi 232 (288)
T 1b0a_A 193 ------------TKNLRHHVEN--ADLLIVAVGKPGFIPGDWIK------E-GAIVIDVGI 232 (288)
T ss_dssp ------------CSCHHHHHHH--CSEEEECSCCTTCBCTTTSC------T-TCEEEECCC
T ss_pred ------------chhHHHHhcc--CCEEEECCCCcCcCCHHHcC------C-CcEEEEccC
Confidence 0468899987 99999999999999988873 3 445555553
No 31
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=94.93 E-value=0.027 Score=56.91 Aligned_cols=86 Identities=22% Similarity=0.246 Sum_probs=55.7
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhc
Q 007703 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (592)
Q Consensus 315 LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA 394 (592)
-.|++.+++..+.++++.+++|+|||.+|.+|+..|.. .|. ++++++++. .++.+.+.. .+.
T Consensus 101 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~----~~~a~~la~---~~~ 162 (277)
T 3don_A 101 GIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYK-----IVR------PTLTVANRT----MSRFNNWSL---NIN 162 (277)
T ss_dssp HHHHHHHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSC----GGGGTTCCS---CCE
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHHHHHHHH---hcc
Confidence 34677888888999999999999999888888776654 364 678988875 222222221 111
Q ss_pred cccCCCCCHHHHhcccCCcEEEeccCCC
Q 007703 395 HEHEPVNNLLDAVKVIKPTILIGSSGVG 422 (592)
Q Consensus 395 ~~~~~~~~L~e~V~~vkPtvLIG~S~~~ 422 (592)
. ....++.++++. .|++|-++..|
T Consensus 163 ~--~~~~~~~~~~~~--aDiVInaTp~G 186 (277)
T 3don_A 163 K--INLSHAESHLDE--FDIIINTTPAG 186 (277)
T ss_dssp E--ECHHHHHHTGGG--CSEEEECCC--
T ss_pred c--ccHhhHHHHhcC--CCEEEECccCC
Confidence 0 112345566654 89999776654
No 32
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=94.89 E-value=0.059 Score=55.23 Aligned_cols=83 Identities=18% Similarity=0.232 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchh
Q 007703 311 ASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF 389 (592)
Q Consensus 311 aaV~LAgll~Alr~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~ 389 (592)
.-+|-.|++..++..+.+|++.++|++|+|. .|..+|.++... | -.+.+++++
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~-----g-------AtVtv~hs~-------------- 194 (286)
T 4a5o_A 141 RPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLG-----G-------CTVTVTHRF-------------- 194 (286)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHT-----T-------CEEEEECTT--------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----C-------CeEEEEeCC--------------
Confidence 3467788999999999999999999999875 899999988652 4 256777542
Q ss_pred chhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHH
Q 007703 390 KKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIE 431 (592)
Q Consensus 390 k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~ 431 (592)
..+|.+.++. +|++|+..+.++.++.++|+
T Consensus 195 ----------T~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 224 (286)
T 4a5o_A 195 ----------TRDLADHVSR--ADLVVVAAGKPGLVKGEWIK 224 (286)
T ss_dssp ----------CSCHHHHHHT--CSEEEECCCCTTCBCGGGSC
T ss_pred ----------CcCHHHHhcc--CCEEEECCCCCCCCCHHHcC
Confidence 1368888986 99999999999999998873
No 33
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=94.79 E-value=0.023 Score=57.53 Aligned_cols=87 Identities=23% Similarity=0.273 Sum_probs=56.1
Q ss_pred HHHHHHHHHhC-CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhc
Q 007703 316 AGVVAALKLIG-GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (592)
Q Consensus 316 Agll~Alr~~g-~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA 394 (592)
.|++.+++..+ .+++..+++|+|||.+|..+|..|.. .|. ++++++|+. .+| .......+.
T Consensus 125 ~G~~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~-----~G~------~~V~v~nR~----~~k---a~~la~~~~ 186 (297)
T 2egg_A 125 LGYVQALEEEMNITLDGKRILVIGAGGGARGIYFSLLS-----TAA------ERIDMANRT----VEK---AERLVREGD 186 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECSS----HHH---HHHHHHHSC
T ss_pred HHHHHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHH---HHHHHHHhh
Confidence 78888888887 78999999999999888888777654 364 579988874 111 111111221
Q ss_pred cccCCC---CCHHHHhcccCCcEEEeccCCC
Q 007703 395 HEHEPV---NNLLDAVKVIKPTILIGSSGVG 422 (592)
Q Consensus 395 ~~~~~~---~~L~e~V~~vkPtvLIG~S~~~ 422 (592)
...... .++.++++. .|++|-+++.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~--aDivIn~t~~~ 215 (297)
T 2egg_A 187 ERRSAYFSLAEAETRLAE--YDIIINTTSVG 215 (297)
T ss_dssp SSSCCEECHHHHHHTGGG--CSEEEECSCTT
T ss_pred hccCceeeHHHHHhhhcc--CCEEEECCCCC
Confidence 100011 245566654 89999887755
No 34
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=94.63 E-value=0.68 Score=49.62 Aligned_cols=178 Identities=17% Similarity=0.173 Sum_probs=118.0
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchH--HHHHHHHc---CC--Cceecc----------CCcchHHHHHH
Q 007703 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYG---TT--HLVFND----------DIQGTASVVLA 316 (592)
Q Consensus 254 ~geeY~~~idefv~av~~~fGp~~lIqfEDf~~~~A--f~lL~ryr---~~--~~~FND----------DiQGTaaV~LA 316 (592)
+.+|-..|...|++++.+.-||..-|-=+|++..-. --+.+.|+ .. ..++.- --.-||-=+.-
T Consensus 115 s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~ 194 (415)
T 2tmg_A 115 SRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKV 194 (415)
T ss_dssp CHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHH
Confidence 455677889999999999989998899999987521 11445553 21 123322 22336666666
Q ss_pred HHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhc-hhhcc
Q 007703 317 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK-KPWAH 395 (592)
Q Consensus 317 gll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k-~~fA~ 395 (592)
++-.+++..|.++++.||+|.|.|..|...|++|.+ +.|. +=+-+.|++|-+++... |+... +.+..
T Consensus 195 ~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e----~~Ga------kvVavsD~~G~i~dp~G--ld~~~l~~~~~ 262 (415)
T 2tmg_A 195 CAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQ----ELGS------KVVAVSDSRGGIYNPEG--FDVEELIRYKK 262 (415)
T ss_dssp HHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHH----TTCC------EEEEEECSSCEEECTTC--CCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHH----hcCC------EEEEEEeCCCeEECCCC--CCHHHHHHHHH
Confidence 777888999999999999999999999999988865 1253 33448999999887642 43321 11111
Q ss_pred ccCCC--------CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCC-CC
Q 007703 396 EHEPV--------NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSN-PT 450 (592)
Q Consensus 396 ~~~~~--------~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSN-Pt 450 (592)
..... -+-.| +-.++.|+||=+.. ++..|++-.+.+ . -.+|.--+| |+
T Consensus 263 ~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l----~-ak~V~EgAN~p~ 319 (415)
T 2tmg_A 263 EHGTVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI----K-AKAVVEGANGPT 319 (415)
T ss_dssp HSSCSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC----C-CSEEECCSSSCB
T ss_pred hhCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc----C-CeEEEeCCCccc
Confidence 11110 12233 45678999997766 568888877766 3 567777777 65
No 35
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=94.63 E-value=0.064 Score=55.33 Aligned_cols=86 Identities=24% Similarity=0.317 Sum_probs=69.1
Q ss_pred cchHHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCC
Q 007703 308 QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL 386 (592)
Q Consensus 308 QGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l 386 (592)
.|-.-+|-.|++..++..+.+|++.++|++|+|. .|..+|.+|... | -.+.+++++ .
T Consensus 142 ~~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~~~~-------T--- 199 (300)
T 4a26_A 142 PPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKE-----N-------ATVTIVHSG-------T--- 199 (300)
T ss_dssp CSCCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT-------S---
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-----C-------CeEEEEeCC-------C---
Confidence 3444677788999999999999999999999876 899999988752 5 257888762 1
Q ss_pred chhchhhccccCCCCCHH--HHhcccCCcEEEeccCCCCCCCHHHHH
Q 007703 387 QHFKKPWAHEHEPVNNLL--DAVKVIKPTILIGSSGVGRTFTKEVIE 431 (592)
Q Consensus 387 ~~~k~~fA~~~~~~~~L~--e~V~~vkPtvLIG~S~~~g~Ft~evv~ 431 (592)
.+|. +.++. .|++|...+.++.++.++++
T Consensus 200 --------------~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk 230 (300)
T 4a26_A 200 --------------STEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK 230 (300)
T ss_dssp --------------CHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC
T ss_pred --------------CCchhhhhhcc--CCEEEECCCCCCCCcHHhcC
Confidence 1355 88886 99999999999999998873
No 36
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=94.61 E-value=0.53 Score=49.38 Aligned_cols=168 Identities=18% Similarity=0.183 Sum_probs=107.9
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHH--HHHHHHcC---CCcee---ccCCcchHHHHHHHHHHHHHHh
Q 007703 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYGT---THLVF---NDDIQGTASVVLAGVVAALKLI 325 (592)
Q Consensus 254 ~geeY~~~idefv~av~~~fGp~~lIqfEDf~~~~Af--~lL~ryr~---~~~~F---NDDiQGTaaV~LAgll~Alr~~ 325 (592)
+..+-++++..|.+++.+..|+ -|-=+|++..-.. -+.+.|+. +-..+ .|--.-||-=+.-++-.+++..
T Consensus 91 s~~~~e~~~r~~~~~~~~l~g~--~ipa~D~gt~~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~ 168 (355)
T 1c1d_A 91 DPSTWARILRIHAENIDKLSGN--YWTGPDVNTNSADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHR 168 (355)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTS--EEEEECTTCCHHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred ChhhHHHHHHHHHHHHHHhcCC--cccCCCCCCCHHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhc
Confidence 3345567888888888887776 4788999764321 15556651 11111 1111236666666778888889
Q ss_pred CC-CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcccc-CCCCCH
Q 007703 326 GG-TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNL 403 (592)
Q Consensus 326 g~-~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~-~~~~~L 403 (592)
|. +|++.+++|.|.|..|..+|+.+.. .|. ++++.|++ ..| ..|+... ...-++
T Consensus 169 G~~~L~GktV~I~G~GnVG~~~A~~l~~-----~Ga-------kVvvsD~~----~~~--------~~~a~~~ga~~v~~ 224 (355)
T 1c1d_A 169 GLGSLDGLTVLVQGLGAVGGSLASLAAE-----AGA-------QLLVADTD----TER--------VAHAVALGHTAVAL 224 (355)
T ss_dssp TCCCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC----HHH--------HHHHHHTTCEECCG
T ss_pred CCCCCCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEeCC----ccH--------HHHHHhcCCEEeCh
Confidence 98 8999999999999999999987754 363 67788864 111 2233211 011234
Q ss_pred HHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCC-CCCCCC
Q 007703 404 LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSN-PTSQSE 454 (592)
Q Consensus 404 ~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSN-Pt~~aE 454 (592)
.|..+ ++.|+|+=+ +.++..+++-++.|. -.+|.--+| |+...|
T Consensus 225 ~ell~-~~~DIliP~-A~~~~I~~~~~~~lk-----~~iVie~AN~p~t~~e 269 (355)
T 1c1d_A 225 EDVLS-TPCDVFAPC-AMGGVITTEVARTLD-----CSVVAGAANNVIADEA 269 (355)
T ss_dssp GGGGG-CCCSEEEEC-SCSCCBCHHHHHHCC-----CSEECCSCTTCBCSHH
T ss_pred HHhhc-CccceecHh-HHHhhcCHHHHhhCC-----CCEEEECCCCCCCCHH
Confidence 44443 578999954 457799999999884 457777777 654334
No 37
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.53 E-value=0.074 Score=52.79 Aligned_cols=97 Identities=20% Similarity=0.275 Sum_probs=56.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchh-------hccc--------
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-------WAHE-------- 396 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~-------fA~~-------- 396 (592)
+||.|+|+|..|.+||..++.+ |. +++++|++- + .++..+.. +...
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~~----~---~~~~~~~~i~~~~~~~~~~g~~~~~~~ 65 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDINT----D---ALDAAKKRFEGLAAVYEKEVAGAADGA 65 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSH----H---HHHHHHHHHHHHHHHHHHHSTTCTTTH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCH----H---HHHHHHHHHHHHHHHHHHhcccCCHHH
Confidence 6899999999999999988753 63 688888741 1 12111111 1000
Q ss_pred -------cCCCCCHHHHhcccCCcEEEeccCCCC-CCCHHHHHHHHccCCCCceEEecCCCCCC
Q 007703 397 -------HEPVNNLLDAVKVIKPTILIGSSGVGR-TFTKEVIEAMASFNEVKPLILALSNPTSQ 452 (592)
Q Consensus 397 -------~~~~~~L~e~V~~vkPtvLIG~S~~~g-~Ft~evv~~Ma~~~e~rPIIFaLSNPt~~ 452 (592)
.....++.|+++. .|++|=+-. .. ...+++++.+.+... .-.|+ .||-++.
T Consensus 66 ~~~~~~~i~~~~~~~~~~~~--aDlVi~av~-~~~~~~~~v~~~l~~~~~-~~~il-~s~tS~~ 124 (283)
T 4e12_A 66 AQKALGGIRYSDDLAQAVKD--ADLVIEAVP-ESLDLKRDIYTKLGELAP-AKTIF-ATNSSTL 124 (283)
T ss_dssp HHHHHHHCEEESCHHHHTTT--CSEEEECCC-SCHHHHHHHHHHHHHHSC-TTCEE-EECCSSS
T ss_pred HHHHHcCeEEeCCHHHHhcc--CCEEEEecc-CcHHHHHHHHHHHHhhCC-CCcEE-EECCCCC
Confidence 0123578888875 898884322 21 145667777776555 33344 3454443
No 38
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=94.52 E-value=0.16 Score=55.30 Aligned_cols=124 Identities=15% Similarity=0.210 Sum_probs=87.5
Q ss_pred cCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCcc
Q 007703 305 DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD 384 (592)
Q Consensus 305 DDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~ 384 (592)
+.+.|+......|+ .+.+|..+.+.+++|+|.|..|.++|+.+... |. +++.+|++.. +.
T Consensus 234 r~~~~~~~~l~~gw---~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~----~~- 293 (479)
T 1v8b_A 234 DNVYGCRHSLPDGL---MRATDFLISGKIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPI----CA- 293 (479)
T ss_dssp HHHHHHHHHHHHHH---HHHHCCCCTTSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHH----HH-
T ss_pred hchHhHHHHHhhhh---hhccccccCCCEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChh----hH-
Confidence 34455555556663 25678899999999999999999999988653 63 6888887521 00
Q ss_pred CCchhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCCCCCCCCHHHHhc
Q 007703 385 SLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPTSQSECTAEEAYT 462 (592)
Q Consensus 385 ~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~~aEct~e~A~~ 462 (592)
+ ..+...-...+|.|+++. .|++|.+....++++++.++.|.+ .-||.=.|.-. .|+.-++..+
T Consensus 294 -~-----~a~~~g~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK~----gailiNvgrg~--~EId~~aL~~ 357 (479)
T 1v8b_A 294 -I-----QAVMEGFNVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMKN----NAVVGNIGHFD--DEIQVNELFN 357 (479)
T ss_dssp -H-----HHHTTTCEECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCCT----TCEEEECSSTT--TSBCHHHHHT
T ss_pred -H-----HHHHcCCEecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcCC----CcEEEEeCCCC--ccccchhhhc
Confidence 0 011111112479999986 999999988888999999988875 67887777654 6667666655
No 39
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=94.45 E-value=0.031 Score=58.02 Aligned_cols=112 Identities=20% Similarity=0.252 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHH---------hCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCC
Q 007703 313 VVLAGVVAALKL---------IGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 382 (592)
Q Consensus 313 V~LAgll~Alr~---------~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R 382 (592)
+|-.|.+-.++. .|.++...++||+|+|. .|.-+|.++.. .| .+++++|++..-...|
T Consensus 150 cTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~-----~g-------AtVtv~nR~~~~l~~r 217 (320)
T 1edz_A 150 CTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLAN-----DG-------ATVYSVDVNNIQKFTR 217 (320)
T ss_dssp HHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHT-----TS-------CEEEEECSSEEEEEES
T ss_pred CcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHH-----CC-------CEEEEEeCchHHHHhH
Confidence 344555666666 68899999999999996 59888888764 24 3588999876555555
Q ss_pred ccCCchhchhhccccCC---C--CCHHHHhcccCCcEEEeccCCCCC-CCHHHHHHHHccCCCCceEEecCCC
Q 007703 383 KDSLQHFKKPWAHEHEP---V--NNLLDAVKVIKPTILIGSSGVGRT-FTKEVIEAMASFNEVKPLILALSNP 449 (592)
Q Consensus 383 ~~~l~~~k~~fA~~~~~---~--~~L~e~V~~vkPtvLIG~S~~~g~-Ft~evv~~Ma~~~e~rPIIFaLSNP 449 (592)
.+.+... +|.... . .+|.+.++. .|++|+..+.++. +|.++|+ + .=+|+-++.|
T Consensus 218 a~~la~~----~~~~t~~~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk------~-GavVIDVgi~ 277 (320)
T 1edz_A 218 GESLKLN----KHHVEDLGEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK------E-GAVCINFACT 277 (320)
T ss_dssp CCCSSCC----CCEEEEEEECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC------T-TEEEEECSSS
T ss_pred HHHHhhh----cccccccccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC------C-CeEEEEcCCC
Confidence 4434311 121100 1 469999997 9999999999886 8888873 2 3355555544
No 40
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=94.38 E-value=0.3 Score=52.49 Aligned_cols=177 Identities=18% Similarity=0.189 Sum_probs=116.5
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHHH---HHHHHcC---C--CceeccC----------CcchHHHHH
Q 007703 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYGT---T--HLVFNDD----------IQGTASVVL 315 (592)
Q Consensus 254 ~geeY~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~---lL~ryr~---~--~~~FNDD----------iQGTaaV~L 315 (592)
+.+|-..|...|++++.+.-||..-|-=+|++.. +.+ +.+.|+. . ..++.-+ -.-||-=+.
T Consensus 116 s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~-~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 194 (421)
T 1v9l_A 116 SQRELEELSRGYARAIAPLIGDVVDIPAPDVGTN-AQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVA 194 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCC-HHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-HHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHHH
Confidence 4567788899999999999999999999999973 222 3455531 1 1222222 123555556
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEE-EEccCCcccCCCccCCc---hhch
Q 007703 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQ---HFKK 391 (592)
Q Consensus 316 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~-lvD~~GLv~~~R~~~l~---~~k~ 391 (592)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .| -+++ +.|++|-|++...=+++ .++.
T Consensus 195 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e-----~G-------akVVavsD~~G~i~dp~GlD~~~l~~~k~ 262 (421)
T 1v9l_A 195 VATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEK-----MG-------AKVIAVSDINGVAYRKEGLNVELIQKNKG 262 (421)
T ss_dssp HHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEECSSCEEECTTCCCTHHHHHTTT
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----CC-------CEEEEEECCCcEEECCCCCCHHHHHHHHH
Confidence 6777888889999999999999999999999987754 35 3455 89999999876421121 1221
Q ss_pred h--------hcccc--CCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCC-CC
Q 007703 392 P--------WAHEH--EPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSN-PT 450 (592)
Q Consensus 392 ~--------fA~~~--~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSN-Pt 450 (592)
. |.... ....+-.| +-.++.|+|+=+.. ++..|++-++.+ . -.||.--+| |+
T Consensus 263 ~~g~~~v~~y~~~~~~~~~~~~~~-~~~~~~Dil~P~A~-~~~I~~~~a~~l----~-ak~V~EgAN~p~ 325 (421)
T 1v9l_A 263 LTGPALVELFTTKDNAEFVKNPDA-IFKLDVDIFVPAAI-ENVIRGDNAGLV----K-ARLVVEGANGPT 325 (421)
T ss_dssp SCHHHHHHHHHHTSCCCCCSSTTG-GGGCCCSEEEECSC-SSCBCTTTTTTC----C-CSEEECCSSSCB
T ss_pred hhCCccccccccccCceEeCCchh-hhcCCccEEEecCc-CCccchhhHHHc----C-ceEEEecCCCcC
Confidence 1 11000 11101123 34568899997664 678888777665 3 678888888 65
No 41
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=94.05 E-value=1.2 Score=48.22 Aligned_cols=179 Identities=17% Similarity=0.189 Sum_probs=117.9
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHHH--HHHHHc---CC--Cceecc----------CCcchHHHHHH
Q 007703 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE--LLAKYG---TT--HLVFND----------DIQGTASVVLA 316 (592)
Q Consensus 254 ~geeY~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~--lL~ryr---~~--~~~FND----------DiQGTaaV~LA 316 (592)
+..|-..|-..||..+.+..||..-|-=+|++..-... +.+.|+ +. .-++-. .-.-||-=+.-
T Consensus 136 s~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~ 215 (449)
T 1bgv_A 136 SDREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVY 215 (449)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHH
Confidence 34567778888999998889999999999998762211 334443 22 122211 22336666666
Q ss_pred HHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCC-chh------
Q 007703 317 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL-QHF------ 389 (592)
Q Consensus 317 gll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l-~~~------ 389 (592)
++-.+++..|.+|++.||+|-|.|..|...|++|.+. |. +=+-+.|++|-|++.. .| ++.
T Consensus 216 ~~~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~--Gi~d~edi~~l~ 282 (449)
T 1bgv_A 216 YVEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE--GITTEEKINYML 282 (449)
T ss_dssp HHHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT--CSCSHHHHHHHH
T ss_pred HHHHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC--cCCCHHHHHHHH
Confidence 7778889999999999999999999999999888653 53 3344789888888753 34 221
Q ss_pred --c-------hhhccc--cCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCC-CC
Q 007703 390 --K-------KPWAHE--HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSN-PT 450 (592)
Q Consensus 390 --k-------~~fA~~--~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSN-Pt 450 (592)
| ..|+.. .+.. +-.+. -.++.|+|+=+.. ++..|++-.+.+.. |. -.+|.-=+| |+
T Consensus 283 ~~k~~~~g~v~~y~~~~~a~~i-~~~e~-~~~~~Dil~P~A~-~~~I~~~na~~l~a-~g-~kiV~EgAN~p~ 350 (449)
T 1bgv_A 283 EMRASGRNKVQDYADKFGVQFF-PGEKP-WGQKVDIIMPCAT-QNDVDLEQAKKIVA-NN-VKYYIEVANMPT 350 (449)
T ss_dssp HHHHHCCCCTHHHHHHHTCEEE-ETCCG-GGSCCSEEECCSC-TTCBCHHHHHHHHH-TT-CCEEECCSSSCB
T ss_pred HHHhccCCChhhcccccCCEEe-Cchhh-hcCCcceeecccc-ccccchhhHHHHHh-cC-CeEEEeCCCCcC
Confidence 1 111110 0000 00112 2568999997774 67999999999864 23 468888888 65
No 42
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=93.99 E-value=0.15 Score=50.98 Aligned_cols=110 Identities=21% Similarity=0.214 Sum_probs=71.8
Q ss_pred HHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCC
Q 007703 322 LKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVN 401 (592)
Q Consensus 322 lr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~ 401 (592)
++..+..|.+.+++|+|+|..|..+|+.+.. .|. +++.+|+.- .+ +...+..-++. ....
T Consensus 148 ~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~-----~G~-------~V~~~d~~~----~~---~~~~~~~g~~~-~~~~ 207 (300)
T 2rir_A 148 IQHTDYTIHGSQVAVLGLGRTGMTIARTFAA-----LGA-------NVKVGARSS----AH---LARITEMGLVP-FHTD 207 (300)
T ss_dssp HHTCSSCSTTSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSH----HH---HHHHHHTTCEE-EEGG
T ss_pred HHhcCCCCCCCEEEEEcccHHHHHHHHHHHH-----CCC-------EEEEEECCH----HH---HHHHHHCCCeE-Echh
Confidence 4456889999999999999999999998754 253 688888741 11 11111000110 0124
Q ss_pred CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCCCCCCCCHHHH
Q 007703 402 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPTSQSECTAEEA 460 (592)
Q Consensus 402 ~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~~aEct~e~A 460 (592)
+|.|+++. .|++|-... .+.++++.++.|.+ ..+|+=+|.-. .+|..+.+
T Consensus 208 ~l~~~l~~--aDvVi~~~p-~~~i~~~~~~~mk~----g~~lin~a~g~--~~~~~~~a 257 (300)
T 2rir_A 208 ELKEHVKD--IDICINTIP-SMILNQTVLSSMTP----KTLILDLASRP--GGTDFKYA 257 (300)
T ss_dssp GHHHHSTT--CSEEEECCS-SCCBCHHHHTTSCT----TCEEEECSSTT--CSBCHHHH
T ss_pred hHHHHhhC--CCEEEECCC-hhhhCHHHHHhCCC----CCEEEEEeCCC--CCcCHHHH
Confidence 68888874 999997666 47999988877754 77888888532 33445443
No 43
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=93.78 E-value=0.34 Score=50.92 Aligned_cols=102 Identities=16% Similarity=0.328 Sum_probs=62.4
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHh
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V 407 (592)
++.+.+++|+|+|..|..++..+... |. ++++++|+. ..| .....+.|--+.-...++.+.+
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~-----G~------~~V~v~~r~----~~r---a~~la~~~g~~~~~~~~l~~~l 225 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDR-----GV------RAVLVANRT----YER---AVELARDLGGEAVRFDELVDHL 225 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHH-----CC------SEEEEECSS----HHH---HHHHHHHHTCEECCGGGHHHHH
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHC-----CC------CEEEEEeCC----HHH---HHHHHHHcCCceecHHhHHHHh
Confidence 57899999999999999988877642 64 579988874 111 1111111210111124677777
Q ss_pred cccCCcEEEeccCCCC-CCCHHHHHH--HH-ccCCCCceEEecCCCC
Q 007703 408 KVIKPTILIGSSGVGR-TFTKEVIEA--MA-SFNEVKPLILALSNPT 450 (592)
Q Consensus 408 ~~vkPtvLIG~S~~~g-~Ft~evv~~--Ma-~~~e~rPIIFaLSNPt 450 (592)
+ +.|++|=+++.+. .++++.++. |. +... +-+++-++.|.
T Consensus 226 ~--~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~-~~v~vdia~P~ 269 (404)
T 1gpj_A 226 A--RSDVVVSATAAPHPVIHVDDVREALRKRDRRS-PILIIDIANPR 269 (404)
T ss_dssp H--TCSEEEECCSSSSCCBCHHHHHHHHHHCSSCC-CEEEEECCSSC
T ss_pred c--CCCEEEEccCCCCceecHHHHHHHHHhccCCC-CEEEEEccCCC
Confidence 6 4899998766543 567788887 43 2122 34555566553
No 44
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=93.69 E-value=0.13 Score=52.57 Aligned_cols=98 Identities=14% Similarity=0.292 Sum_probs=73.9
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCc
Q 007703 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (592)
Q Consensus 309 GTaaV~LAgll~Alr~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~ 387 (592)
+-.-+|-.|++-.++..|.+++..++|++|+|. .|.-+|.++.. .|. ...+++++++
T Consensus 136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~-----~g~-----~atVtv~h~~------------ 193 (281)
T 2c2x_A 136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTR-----RSE-----NATVTLCHTG------------ 193 (281)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTS-----TTT-----CCEEEEECTT------------
T ss_pred CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhc-----CCC-----CCEEEEEECc------------
Confidence 344567778899999999999999999999996 58888877753 210 1457777532
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCC
Q 007703 388 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNP 449 (592)
Q Consensus 388 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNP 449 (592)
..+|.+.++. .|++|+..+.++.+|+++|+ + .-+|+=++-|
T Consensus 194 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~-GavVIDVgi~ 234 (281)
T 2c2x_A 194 ------------TRDLPALTRQ--ADIVVAAVGVAHLLTADMVR------P-GAAVIDVGVS 234 (281)
T ss_dssp ------------CSCHHHHHTT--CSEEEECSCCTTCBCGGGSC------T-TCEEEECCEE
T ss_pred ------------hhHHHHHHhh--CCEEEECCCCCcccCHHHcC------C-CcEEEEccCC
Confidence 1468899986 99999999999999999874 3 4566666654
No 45
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.55 E-value=0.031 Score=49.57 Aligned_cols=71 Identities=15% Similarity=0.315 Sum_probs=42.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 410 (592)
+.|++|+|+|..|..++..+.. .|. + ++++|++ ..+ .....+.|.-+.....++.++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~-----~g~------~-v~v~~r~----~~~---~~~~a~~~~~~~~~~~~~~~~~~~- 80 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSY-----PQY------K-VTVAGRN----IDH---VRAFAEKYEYEYVLINDIDSLIKN- 80 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCT-----TTC------E-EEEEESC----HHH---HHHHHHHHTCEEEECSCHHHHHHT-
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCC------E-EEEEcCC----HHH---HHHHHHHhCCceEeecCHHHHhcC-
Confidence 7899999999999888776543 242 4 8888873 111 112222221111234578888875
Q ss_pred CCcEEEeccCCC
Q 007703 411 KPTILIGSSGVG 422 (592)
Q Consensus 411 kPtvLIG~S~~~ 422 (592)
.|++|=+++.+
T Consensus 81 -~Divi~at~~~ 91 (144)
T 3oj0_A 81 -NDVIITATSSK 91 (144)
T ss_dssp -CSEEEECSCCS
T ss_pred -CCEEEEeCCCC
Confidence 78888665543
No 46
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=93.44 E-value=0.17 Score=55.35 Aligned_cols=110 Identities=17% Similarity=0.242 Sum_probs=77.7
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCch
Q 007703 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (592)
Q Consensus 309 GTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~ 388 (592)
|+......|+ .+.+|..+.+.+++|+|.|..|.++|+.+.. .|. +++.+|++.. +. +..
T Consensus 258 ~~~~~l~~gw---~~~~g~~L~GktVgIIG~G~IG~~vA~~l~~-----~G~-------~V~v~d~~~~----~~--~~a 316 (494)
T 3d64_A 258 GCRESLVDGI---KRATDVMIAGKIAVVAGYGDVGKGCAQSLRG-----LGA-------TVWVTEIDPI----CA--LQA 316 (494)
T ss_dssp HHHTTHHHHH---HHHHCCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECSCHH----HH--HHH
T ss_pred hhhhhhhhhh---hhccccccCCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCChH----hH--HHH
Confidence 3333445552 3578999999999999999999999998753 253 6888887521 00 000
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCC
Q 007703 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 389 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
+...-...+|.|+++. .|+++......++++++.++.|.+ .-||.=.|...
T Consensus 317 -----~~~G~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK~----gAilINvgrg~ 367 (494)
T 3d64_A 317 -----AMEGYRVVTMEYAADK--ADIFVTATGNYHVINHDHMKAMRH----NAIVCNIGHFD 367 (494)
T ss_dssp -----HTTTCEECCHHHHTTT--CSEEEECSSSSCSBCHHHHHHCCT----TEEEEECSSSS
T ss_pred -----HHcCCEeCCHHHHHhc--CCEEEECCCcccccCHHHHhhCCC----CcEEEEcCCCc
Confidence 0111112479999986 999999987788999999999975 67787777754
No 47
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.40 E-value=0.2 Score=51.36 Aligned_cols=195 Identities=14% Similarity=0.168 Sum_probs=100.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchh-------hccc-------
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-------WAHE------- 396 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~-------fA~~------- 396 (592)
-+||.|+|+|..|.+||..++.+ |. +++++|.+- + .+...+.. ++..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~~----~---~~~~~~~~i~~~l~~l~~~G~~~g~~ 66 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIEP----R---QITGALENIRKEMKSLQQSGSLKGSL 66 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSCH----H---HHHHHHHHHHHHHHHHHHTTCCCSSS
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCCH----H---HHHHHHHHHHHHHHHHHHcCcccccc
Confidence 36899999999999999988753 64 688888741 1 11111100 0000
Q ss_pred --------cCCCCCHHHHhcccCCcEEEeccCCCC-CCCHHHHHHHHccCCCCceEEecCCCCCCCCCCHHHHhccccCc
Q 007703 397 --------HEPVNNLLDAVKVIKPTILIGSSGVGR-TFTKEVIEAMASFNEVKPLILALSNPTSQSECTAEEAYTWSKGR 467 (592)
Q Consensus 397 --------~~~~~~L~e~V~~vkPtvLIG~S~~~g-~Ft~evv~~Ma~~~e~rPIIFaLSNPt~~aEct~e~A~~wt~G~ 467 (592)
-....++.|+++. .|++| .+.... .+.+++++.+.++.. .-.|++ ||=++ .++.+..+.....
T Consensus 67 ~~~~~~~~i~~~~~~~eav~~--aDlVi-eavpe~~~~k~~v~~~l~~~~~-~~~Ii~-s~tS~---i~~~~la~~~~~~ 138 (319)
T 2dpo_A 67 SAEEQLSLISSCTNLAEAVEG--VVHIQ-ECVPENLDLKRKIFAQLDSIVD-DRVVLS-SSSSC---LLPSKLFTGLAHV 138 (319)
T ss_dssp CHHHHHHTEEEECCHHHHTTT--EEEEE-ECCCSCHHHHHHHHHHHHTTCC-SSSEEE-ECCSS---CCHHHHHTTCTTG
T ss_pred chHHHhhceEEeCCHHHHHhc--CCEEE-EeccCCHHHHHHHHHHHHhhCC-CCeEEE-EeCCC---hHHHHHHHhcCCC
Confidence 0112589899986 78877 333322 245677788877665 334443 44222 4455555444322
Q ss_pred EEEecCCCCCcceeCCeeeCccCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHcccCccccCCCcccCCCCCchh
Q 007703 468 AIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRK 547 (592)
Q Consensus 468 aifAsGSPF~pV~~~G~~~~p~Q~NN~yiFPGiglG~~~s~a~~Itd~m~~aAA~aLA~~v~~~~~~~g~l~P~~~~ir~ 547 (592)
.=|.-+-||.|+.+.+ -+-|. ....-+++.+ +.++.+...+...-..-+.-.|.+
T Consensus 139 ~r~ig~Hp~~P~~~~~---------lveiv----------~g~~t~~e~~-~~~~~l~~~lGk~~v~v~~~~~Gf----- 193 (319)
T 2dpo_A 139 KQCIVAHPVNPPYYIP---------LVELV----------PHPETSPATV-DRTHALMRKIGQSPVRVLKEIDGF----- 193 (319)
T ss_dssp GGEEEEEECSSTTTCC---------EEEEE----------ECTTCCHHHH-HHHHHHHHHTTCEEEECSSCCTTT-----
T ss_pred CCeEEeecCCchhhcc---------eEEEe----------CCCCCCHHHH-HHHHHHHHHcCCEEEEECCCcCCc-----
Confidence 2233344777663221 11122 2233455544 455666655543222111112222
Q ss_pred hHHHHHHHHHHHH---HHcCCCCCCCCchhHHHHHHh
Q 007703 548 ISANIAANVAAKA---YELGVATRLPRPQNLVKCAES 581 (592)
Q Consensus 548 vs~~VA~aVa~~A---~~~G~a~~~~~p~d~~~~i~~ 581 (592)
+.-++..+....| .++|.++ ++++.+-++.
T Consensus 194 i~Nrll~a~~~EA~~l~~~g~~~----~~~id~a~~~ 226 (319)
T 2dpo_A 194 VLNRLQYAIISEAWRLVEEGIVS----PSDLDLVMSD 226 (319)
T ss_dssp THHHHHHHHHHHHHHHHHTTSSC----HHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHhCCCC----HHHHHHHHHh
Confidence 4444444444444 3667664 5677666654
No 48
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=93.32 E-value=0.12 Score=54.28 Aligned_cols=159 Identities=14% Similarity=0.119 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHhcCCCeeeeeecCCCchHHHHHHHHcCCC-ceeccC---------CcchHHHHHHHHHHHHHHh-CC
Q 007703 259 AELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTH-LVFNDD---------IQGTASVVLAGVVAALKLI-GG 327 (592)
Q Consensus 259 ~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~lL~ryr~~~-~~FNDD---------iQGTaaV~LAgll~Alr~~-g~ 327 (592)
++++..|.+++.+.+|+ -|-=+|++..-. .+...-+++ ++---- ..-||-=+.-++..+++.. |.
T Consensus 93 ~~~~r~~~~~~~~l~g~--~i~A~D~Gt~~~--~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~ 168 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGR--YITAEDVGTTVD--DMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGS 168 (364)
T ss_dssp HHHHHHHHHHHHTTTTS--EEBCBCTTCCHH--HHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHhcCc--eEEcccCCCCHH--HHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhccc
Confidence 45677777778887775 467788875432 333333333 211111 1235544555666666664 76
Q ss_pred -CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHH
Q 007703 328 -TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (592)
Q Consensus 328 -~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 406 (592)
+|++.+|+|.|+|..|..+|+.+.+ .|. ++++.|++ . +.+..+...|- ...-++.+.
T Consensus 169 ~~L~GktV~V~G~G~VG~~~A~~L~~-----~Ga-------kVvv~D~~----~---~~l~~~a~~~g---a~~v~~~~l 226 (364)
T 1leh_A 169 DSLEGLAVSVQGLGNVAKALCKKLNT-----EGA-------KLVVTDVN----K---AAVSAAVAEEG---ADAVAPNAI 226 (364)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC----H---HHHHHHHHHHC---CEECCGGGT
T ss_pred cCCCcCEEEEECchHHHHHHHHHHHH-----CCC-------EEEEEcCC----H---HHHHHHHHHcC---CEEEChHHH
Confidence 8999999999999999999998865 363 57788853 1 11333332221 111133333
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCC-CC
Q 007703 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSN-PT 450 (592)
Q Consensus 407 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSN-Pt 450 (592)
. ..+.|++|=+ +..+.++++.++.| . -.+|.--+| |+
T Consensus 227 l-~~~~DIvip~-a~~~~I~~~~~~~l----g-~~iV~e~An~p~ 264 (364)
T 1leh_A 227 Y-GVTCDIFAPC-ALGAVLNDFTIPQL----K-AKVIAGSADNQL 264 (364)
T ss_dssp T-TCCCSEEEEC-SCSCCBSTTHHHHC----C-CSEECCSCSCCB
T ss_pred h-ccCCcEeecc-chHHHhCHHHHHhC----C-CcEEEeCCCCCc
Confidence 3 3578999955 45679999888877 2 567776666 55
No 49
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.07 E-value=0.17 Score=52.33 Aligned_cols=96 Identities=19% Similarity=0.299 Sum_probs=62.8
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcccc----CCCCCHH
Q 007703 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLL 404 (592)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~----~~~~~L~ 404 (592)
+...+++|+|||.+|.+++..+.. .| | +++++|++ ..| +...+..++... ....++.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~-----~G-----a--~V~v~dr~----~~r---~~~~~~~~~~~~~~~~~~~~~~~ 225 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVG-----LG-----A--QVQIFDIN----VER---LSYLETLFGSRVELLYSNSAEIE 225 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH-----TT-----C--EEEEEESC----HHH---HHHHHHHHGGGSEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CC-----C--EEEEEeCC----HHH---HHHHHHhhCceeEeeeCCHHHHH
Confidence 667899999999999999887754 36 2 68888874 111 222222233210 0112466
Q ss_pred HHhcccCCcEEEeccCCCCC-----CCHHHHHHHHccCCCCceEEecCCC
Q 007703 405 DAVKVIKPTILIGSSGVGRT-----FTKEVIEAMASFNEVKPLILALSNP 449 (592)
Q Consensus 405 e~V~~vkPtvLIG~S~~~g~-----Ft~evv~~Ma~~~e~rPIIFaLSNP 449 (592)
+.++ +.|++|.+++.++. ++++.++.|.+ .-+|+-++.+
T Consensus 226 ~~~~--~~DvVI~~~~~~~~~~~~li~~~~~~~~~~----g~~ivdv~~~ 269 (361)
T 1pjc_A 226 TAVA--EADLLIGAVLVPGRRAPILVPASLVEQMRT----GSVIVDVAVD 269 (361)
T ss_dssp HHHH--TCSEEEECCCCTTSSCCCCBCHHHHTTSCT----TCEEEETTCT
T ss_pred HHHc--CCCEEEECCCcCCCCCCeecCHHHHhhCCC----CCEEEEEecC
Confidence 7776 48999998877653 58888887764 5677777754
No 50
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=93.02 E-value=0.71 Score=48.81 Aligned_cols=187 Identities=12% Similarity=0.069 Sum_probs=109.8
Q ss_pred CCceeccCC---cchHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 299 THLVFNDDI---QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 299 ~~~~FNDDi---QGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.+.+.|.-- +.+|=-+++.+|+..|..|..|.+.+|.|+|.|..|-.+|+.+.. .|+ +++.+|+.
T Consensus 81 gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~IG~~vA~~l~~-----~G~-------~V~~~d~~ 148 (380)
T 2o4c_A 81 GIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVGGRLVEVLRG-----LGW-------KVLVCDPP 148 (380)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECHH
T ss_pred CCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHHHHHHHHHHHH-----CCC-------EEEEEcCC
Confidence 455555432 234445899999999999999999999999999999999998864 264 57888763
Q ss_pred CcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc---C-----CCCCCCHHHHHHHHccCCCCceEEecC
Q 007703 376 GLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS---G-----VGRTFTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 376 GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S---~-----~~g~Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
.- .. . ......+|.|+++. .|+++=.- . ..++|+++.++.|.+ ..+|.=.|
T Consensus 149 ~~----------~~--~---~g~~~~~l~ell~~--aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~----gailIN~s 207 (380)
T 2o4c_A 149 RQ----------AR--E---PDGEFVSLERLLAE--ADVISLHTPLNRDGEHPTRHLLDEPRLAALRP----GTWLVNAS 207 (380)
T ss_dssp HH----------HH--S---TTSCCCCHHHHHHH--CSEEEECCCCCSSSSSCCTTSBCHHHHHTSCT----TEEEEECS
T ss_pred hh----------hh--c---cCcccCCHHHHHHh--CCEEEEeccCccccccchhhhcCHHHHhhCCC----CcEEEECC
Confidence 10 00 0 01123579999886 88887542 1 346889999988865 66777666
Q ss_pred CCCCCCCCCHHHHhccccCcEEEecCCCC--CcceeCCeeeCccCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHH
Q 007703 448 NPTSQSECTAEEAYTWSKGRAIFASGSPF--DPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALA 525 (592)
Q Consensus 448 NPt~~aEct~e~A~~wt~G~aifAsGSPF--~pV~~~G~~~~p~Q~NN~yiFPGiglG~~~s~a~~Itd~m~~aAA~aLA 525 (592)
.-..--|-.-.+|+ .+|+..-|.=-=| +|. .+.. .. + +|+++-|=++--...+ -..|...+++.+.
T Consensus 208 RG~vvd~~aL~~aL--~~g~i~~A~LDV~~~EP~-~~~~-l~--~-~nvi~TPHiag~t~e~-----~~~~~~~~~~nl~ 275 (380)
T 2o4c_A 208 RGAVVDNQALRRLL--EGGADLEVALDVWEGEPQ-ADPE-LA--A-RCLIATPHIAGYSLEG-----KLRGTAQIYQAYC 275 (380)
T ss_dssp CGGGBCHHHHHHHH--HTTCCEEEEESCCTTTTS-CCHH-HH--T-TCSEECSSCTTCCHHH-----HHHHHHHHHHHHH
T ss_pred CCcccCHHHHHHHH--HhCCCceEEeeeeccCCC-Cchh-hc--c-CCEEEccccCcCCHHH-----HHHHHHHHHHHHH
Confidence 42211221122333 3455433311111 110 1111 11 1 4788888776321111 2345555566666
Q ss_pred cccCc
Q 007703 526 KQVTE 530 (592)
Q Consensus 526 ~~v~~ 530 (592)
.....
T Consensus 276 ~~l~g 280 (380)
T 2o4c_A 276 AWRGI 280 (380)
T ss_dssp HHHTC
T ss_pred HHHcC
Confidence 66543
No 51
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=92.98 E-value=0.14 Score=51.98 Aligned_cols=49 Identities=20% Similarity=0.264 Sum_probs=41.4
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 316 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.|++.+++..|.++++.+++|+|||.+|.+|+..|.. .|. ++|+++++.
T Consensus 107 ~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~-----~G~------~~v~v~nRt 155 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKD-----NFA------KDIYVVTRN 155 (282)
T ss_dssp HHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 7889999988999999999999999888888877754 364 689998874
No 52
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=92.90 E-value=0.16 Score=52.31 Aligned_cols=50 Identities=32% Similarity=0.403 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 315 LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
-.|++.+++..|.++++.+++|+|||.+|.+||..|.. .|. ++|+++++.
T Consensus 138 ~~Gf~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~ 187 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRK 187 (315)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHHHcCCCccCCEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECC
Confidence 46788888888999999999999999777777766654 364 689999885
No 53
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=92.85 E-value=0.15 Score=51.60 Aligned_cols=97 Identities=20% Similarity=0.193 Sum_probs=61.3
Q ss_pred HHHHHHHHHH-hcCCCeeeeeecCCCchHHHHHHHHcC--------CCceeccC--Ccc--hHHHHHHHHHHHHHHhCCC
Q 007703 262 LDEFMSAVKQ-NYGEKVLIQFEDFANHNAFELLAKYGT--------THLVFNDD--IQG--TASVVLAGVVAALKLIGGT 328 (592)
Q Consensus 262 idefv~av~~-~fGp~~lIqfEDf~~~~Af~lL~ryr~--------~~~~FNDD--iQG--TaaV~LAgll~Alr~~g~~ 328 (592)
+.++++.++. .|.. ++.--=-...++++|++... +..+|++| ..| |- -.|++.+++..|.+
T Consensus 50 l~~~~~~~~~~~~~G---~nVTiP~K~~v~~~ld~l~~~A~~iGAVNTv~~~~~g~l~G~NTD---~~G~~~~L~~~~~~ 123 (281)
T 3o8q_A 50 FTEAAKHFFAQGGRG---CNVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTD---GEGLVQDLLAQQVL 123 (281)
T ss_dssp HHHHHHHHHHTTCCE---EEECTTSHHHHHHHCSEECHHHHHHTCCSEEEECTTSCEEEECCH---HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCCCCE---EEECCccHHHHHHHHhhcCHHHHhhCeeeEEEEcCCCcEEEEecH---HHHHHHHHHHhCCC
Confidence 4666766653 4433 33333333456666654321 12244444 233 33 46788888888999
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+++.+++|+|||.+|.+|+..|.. .|. ++++++++.
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~ 159 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLD-----QQP------ASITVTNRT 159 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-----TCC------SEEEEEESS
T ss_pred ccCCEEEEECchHHHHHHHHHHHh-----cCC------CeEEEEECC
Confidence 999999999999777777766653 364 679988874
No 54
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=92.83 E-value=0.16 Score=52.30 Aligned_cols=49 Identities=33% Similarity=0.443 Sum_probs=39.8
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 316 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.|++.+++..|.++++.+++|+|||.+|.+|+..|.. .|. ++|+++++.
T Consensus 133 ~Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt 181 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK 181 (312)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC
Confidence 5778888888999999999999999887777776654 365 689999874
No 55
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=92.53 E-value=0.77 Score=49.12 Aligned_cols=114 Identities=22% Similarity=0.262 Sum_probs=81.4
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHHH---HHHHHc---CCC-c---eeccC----------CcchHHH
Q 007703 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYG---TTH-L---VFNDD----------IQGTASV 313 (592)
Q Consensus 254 ~geeY~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~---lL~ryr---~~~-~---~FNDD----------iQGTaaV 313 (592)
+.+|-..|...|++++.+.-||..-|-=+|++.. +.+ +.+.|+ ... + ++--+ -.-||-=
T Consensus 115 s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~G 193 (419)
T 1gtm_A 115 SDREKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARG 193 (419)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhhH
Confidence 4567788899999999998899998999999874 222 334553 221 2 33222 1236666
Q ss_pred HHHHHHHHHHHhCCC-cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEE-ccCCccc
Q 007703 314 VLAGVVAALKLIGGT-LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLV-DSKGLIV 379 (592)
Q Consensus 314 ~LAgll~Alr~~g~~-l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lv-D~~GLv~ 379 (592)
+.-++-.+++..|.+ |++.++.|.|.|..|..+|+++... .|+ +++.+ |+.|-+.
T Consensus 194 v~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~----~G~-------kVv~~sD~~g~~~ 250 (419)
T 1gtm_A 194 ASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSED----FGM-------KVVAVSDSKGGIY 250 (419)
T ss_dssp HHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEEECSSCEEE
T ss_pred HHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHh----cCC-------EEEEEeCCCcccc
Confidence 666788889999999 9999999999999999999987641 254 44444 8876544
No 56
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=92.47 E-value=0.16 Score=51.14 Aligned_cols=98 Identities=18% Similarity=0.234 Sum_probs=61.7
Q ss_pred HHHHHHHHHH-hcCCCeeeeeecCCCchHHHHHHHHc---------CCCceeccC-CcchHHHHHHHHHHH-HHHhCCCc
Q 007703 262 LDEFMSAVKQ-NYGEKVLIQFEDFANHNAFELLAKYG---------TTHLVFNDD-IQGTASVVLAGVVAA-LKLIGGTL 329 (592)
Q Consensus 262 idefv~av~~-~fGp~~lIqfEDf~~~~Af~lL~ryr---------~~~~~FNDD-iQGTaaV~LAgll~A-lr~~g~~l 329 (592)
+.++++.++. .|+. ++.----...++++|++.. +.+ ++.|+ ..|.-.= -.|++.+ ++..|.++
T Consensus 44 l~~~~~~~~~~~~~G---~nVTiP~K~~v~~~~d~l~~~A~~iGAvNTv-~~~~g~l~G~NTD-~~G~~~~lL~~~~~~l 118 (272)
T 3pwz_A 44 FEAQVLQFRSEGGKG---MNITAPFKLRAFELADRRSERAQLARAANAL-KFEDGRIVAENFD-GIGLLRDIEENLGEPL 118 (272)
T ss_dssp HHHHHHHHHHTTCCE---EEECTTCHHHHHHHCSEECHHHHHHTCCSEE-EEETTEEEEECCH-HHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHhhCCCCE---EEECchhHHHHHHHHhhCCHHHHHhCccceE-EccCCeEEEecCC-HHHHHHHHHHHcCCCc
Confidence 4667776653 4533 4444334455666666432 122 33333 3442222 3588888 88888899
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
++.+++|+|||.+|.+++..|.+ .|. ++++++++.
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~-----~G~------~~v~i~~R~ 153 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQ-----AGP------SELVIANRD 153 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHH-----TCC------SEEEEECSC
T ss_pred cCCEEEEECccHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 99999999999777777766654 364 679988874
No 57
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=92.26 E-value=0.088 Score=52.37 Aligned_cols=125 Identities=21% Similarity=0.303 Sum_probs=73.7
Q ss_pred HHHHHHHHHHhcC--------CCeeeeeecCCCchHHHHHH--HHcCCCceeccCCcchHHHHHHHHHHHHHHhCCCccc
Q 007703 262 LDEFMSAVKQNYG--------EKVLIQFEDFANHNAFELLA--KYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAE 331 (592)
Q Consensus 262 idefv~av~~~fG--------p~~lIqfEDf~~~~Af~lL~--ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~d 331 (592)
+++|++.++..|. ...++.+=|- ++.|..+=. ....+ .=+|-|- .|++.+++.. .+++
T Consensus 42 l~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~-~~~A~~iGAvNTi~~~-~G~NTD~--------~G~~~~l~~~--~~~~ 109 (253)
T 3u62_A 42 FDTEIRRILEEYDGFNATIPHKERVMRYVEP-SEDAQRIKAVNCVFRG-KGYNTDW--------VGVVKSLEGV--EVKE 109 (253)
T ss_dssp HHHHHHHHHHHCSEEEECTTCTTGGGGGSEE-CHHHHHHTCCCEEETT-EEECCHH--------HHHHHHTTTC--CCCS
T ss_pred HHHHHHHHhhCCCceeecCChHHHHHHHhCC-CHHHHHcCcceEeecC-EEEcchH--------HHHHHHHHhc--CCCC
Confidence 4677777664442 2234555566 666665410 00011 3455553 3677777654 5678
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 411 (592)
+++|+|||.+|.+|+..|.. .|. ++|+++|+. .+|.+.|.. .|.. ....++.++++.
T Consensus 110 -~vliiGaGg~a~ai~~~L~~-----~G~------~~I~v~nR~----~~ka~~la~---~~~~--~~~~~~~~~~~~-- 166 (253)
T 3u62_A 110 -PVVVVGAGGAARAVIYALLQ-----MGV------KDIWVVNRT----IERAKALDF---PVKI--FSLDQLDEVVKK-- 166 (253)
T ss_dssp -SEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESC----HHHHHTCCS---SCEE--EEGGGHHHHHHT--
T ss_pred -eEEEECcHHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHHHHHHH---Hccc--CCHHHHHhhhcC--
Confidence 99999999999888887765 364 679999884 222122221 1110 122457777775
Q ss_pred CcEEEeccCC
Q 007703 412 PTILIGSSGV 421 (592)
Q Consensus 412 PtvLIG~S~~ 421 (592)
.|++|-++..
T Consensus 167 aDiVInatp~ 176 (253)
T 3u62_A 167 AKSLFNTTSV 176 (253)
T ss_dssp CSEEEECSST
T ss_pred CCEEEECCCC
Confidence 8999976654
No 58
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=92.22 E-value=0.22 Score=50.15 Aligned_cols=48 Identities=33% Similarity=0.396 Sum_probs=40.3
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc
Q 007703 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (592)
Q Consensus 316 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (592)
.|++.+++..|.++++.|+|++|||-|+-+|+-.|.+ .|. ++|+++++
T Consensus 110 ~Gf~~~L~~~g~~~~~~~~lilGaGGaarai~~aL~~-----~g~------~~i~i~nR 157 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALAE-----AGI------ASITLCDP 157 (269)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred HHHHHHHHHhCCCcccCeEEEEecHHHHHHHHHHHHH-----hCC------CeEEEeCC
Confidence 4577889999999999999999999999888876654 365 78999987
No 59
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=92.16 E-value=0.48 Score=48.24 Aligned_cols=101 Identities=24% Similarity=0.317 Sum_probs=64.5
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCC---CCCHHHHhc
Q 007703 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVK 408 (592)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~---~~~L~e~V~ 408 (592)
||+|+|| |..|..++.+|+. .|+ ...++++|.+-. .+...+|.+...+ .+ -.. ..++.++++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~~--~~~a~dL~~~~~~-~~-l~~~~~t~d~~~a~~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAHT--PGVAADLSHIETR-AT-VKGYLGPEQLPDCLK 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSSH--HHHHHHHTTSSSS-CE-EEEEESGGGHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCcc--HHHHHHHhccCcC-ce-EEEecCCCCHHHHhC
Confidence 8999998 9999998877653 354 367999998641 1000012111100 00 000 135888898
Q ss_pred ccCCcEEEeccCCCC--------------CCCHHHHHHHHccCCCCceEEecCCCC
Q 007703 409 VIKPTILIGSSGVGR--------------TFTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 409 ~vkPtvLIG~S~~~g--------------~Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
. .|++|=+.+.+. ...+++++.|.+++. ..+|+-.|||.
T Consensus 68 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p-~a~viv~sNPv 120 (314)
T 1mld_A 68 G--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCP-DAMICIISNPV 120 (314)
T ss_dssp T--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCT-TSEEEECSSCH
T ss_pred C--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEEECCCc
Confidence 7 898885544442 235677888888888 88888899998
No 60
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=92.15 E-value=0.66 Score=50.95 Aligned_cols=179 Identities=18% Similarity=0.232 Sum_probs=117.3
Q ss_pred CChhhhHHHHHHHHHHHHH--hcCCCeeeeeecCCCchHH--HHHHHHcC---CC------ceeccCC---------cch
Q 007703 253 ATGQEYAELLDEFMSAVKQ--NYGEKVLIQFEDFANHNAF--ELLAKYGT---TH------LVFNDDI---------QGT 310 (592)
Q Consensus 253 ~~geeY~~~idefv~av~~--~fGp~~lIqfEDf~~~~Af--~lL~ryr~---~~------~~FNDDi---------QGT 310 (592)
.+..|-..|...||..+.+ ..||..-|-=+|++..-.. -+.+.|+. .. |+-..-+ .-|
T Consensus 136 ~s~~El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eAT 215 (501)
T 3mw9_A 136 YTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISAT 215 (501)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTHH
T ss_pred CCHHHHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCch
Confidence 4667888999999999985 7889998999999875322 16677752 11 1111111 234
Q ss_pred HHHHHHHHHH------HHHHhCC--CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCC
Q 007703 311 ASVVLAGVVA------ALKLIGG--TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 382 (592)
Q Consensus 311 aaV~LAgll~------Alr~~g~--~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R 382 (592)
|-=+.-++-+ +++..|. .|++.||+|-|.|..|...|+.|.+ .|. +=+-+.|++|-|++..
T Consensus 216 g~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e-----~Ga------kVVavsDs~G~iyd~~ 284 (501)
T 3mw9_A 216 GRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHR-----FGA------KCITVGESDGSIWNPD 284 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEEECCSHHHHHHHHHHHH-----TTC------EEEEEECSSCEEECTT
T ss_pred HHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEEECCCHHHHHHHHHHHH-----CCC------EEEEEEcCCceEECCC
Confidence 4444444443 4456775 5899999999999999999998875 363 4456899999999764
Q ss_pred ccCCchhch-hhccccC------CCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCC-CC
Q 007703 383 KDSLQHFKK-PWAHEHE------PVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSN-PT 450 (592)
Q Consensus 383 ~~~l~~~k~-~fA~~~~------~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSN-Pt 450 (592)
.|+..+. .+..... ....+.+.+-.++.|+||=+..+ +..|++-++.+. -.||.--+| |+
T Consensus 285 --Gid~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~~DIliPcA~~-n~I~~~na~~l~-----akiV~EgAN~p~ 352 (501)
T 3mw9_A 285 --GIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASE-KQLTKSNAPRVK-----AKIIAEGANGPT 352 (501)
T ss_dssp --CCCHHHHHHHHHHHSSSTTCTTSEEECSCGGGSCCSEEEECSSS-CCBCTTTGGGCC-----CSEEECCSSSCB
T ss_pred --CCCHHHHHHHHHhcCCeecccCceeeccccccccceEEeecccc-CccCHhHHHHcC-----ceEEEeCCCCcC
Confidence 3443221 1111110 00001112456789999988775 799999887763 678888888 54
No 61
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.07 E-value=0.19 Score=50.54 Aligned_cols=102 Identities=14% Similarity=0.185 Sum_probs=62.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCch---hchhhcc-ccCC-CCCHHHH
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH---FKKPWAH-EHEP-VNNLLDA 406 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~---~k~~fA~-~~~~-~~~L~e~ 406 (592)
.||.|+|||+.|..+|..|+.. |+ ...++++|++- ++.+.+.. +-..+.. ...- ..++ ++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~-----~~~V~l~d~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~ 66 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GV-----ADDYVFIDANE----AKVKADQIDFQDAMANLEAHGNIVINDW-AA 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HHHHHHHHHHHHHGGGSSSCCEEEESCG-GG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEcCCH----HHHHHHHHHHHhhhhhcCCCeEEEeCCH-HH
Confidence 3899999999999999988653 54 25799999851 11111110 0001110 0000 1356 66
Q ss_pred hcccCCcEEEeccCCC-------CCC-----------CHHHHHHHHccCCCCceEEecCCCCC
Q 007703 407 VKVIKPTILIGSSGVG-------RTF-----------TKEVIEAMASFNEVKPLILALSNPTS 451 (592)
Q Consensus 407 V~~vkPtvLIG~S~~~-------g~F-----------t~evv~~Ma~~~e~rPIIFaLSNPt~ 451 (592)
++. .|++|=+...+ |.. -+++++.|.+++. ..+|+-+|||..
T Consensus 67 ~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~-~~~ii~~tNp~~ 126 (309)
T 1hyh_A 67 LAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGF-HGVLVVISNPVD 126 (309)
T ss_dssp GTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTC-CSEEEECSSSHH
T ss_pred hCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEEEcCcHH
Confidence 764 88887554432 211 1588888988888 888888999984
No 62
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.02 E-value=0.29 Score=49.48 Aligned_cols=98 Identities=13% Similarity=0.267 Sum_probs=63.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhch------hhccccCC---CCC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK------PWAHEHEP---VNN 402 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~------~fA~~~~~---~~~ 402 (592)
.||.|+|||+.|.++|..++.. |+ .+++++|.+- ++ +..... .+...... ..+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~------~~V~l~D~~~----~~---~~~~~~~l~~~~~~~~~~~~i~~t~d 66 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NL------ADVVLFDIAE----GI---PQGKALDITHSMVMFGSTSKVIGTDD 66 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SH---HHHHHHHHHHHHHHHTCCCCEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------ceEEEEeCCc----hH---HHHHHHHHHhhhhhcCCCcEEEECCC
Confidence 5899999999999999988763 64 1499999852 11 111110 11100111 145
Q ss_pred HHHHhcccCCcEEEeccCCCCC--------------CCHHHHHHHHccCCCCceEEecCCCCC
Q 007703 403 LLDAVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEVKPLILALSNPTS 451 (592)
Q Consensus 403 L~e~V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~e~rPIIFaLSNPt~ 451 (592)
+ ++++. .|++|=+.+.+.. ..+++++.+.+++. .-+|+-.|||..
T Consensus 67 ~-~a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~-~~iii~~sNp~~ 125 (317)
T 2ewd_A 67 Y-ADISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCP-NAFVICITNPLD 125 (317)
T ss_dssp G-GGGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCT-TSEEEECCSSHH
T ss_pred H-HHhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCC-CcEEEEeCChHH
Confidence 6 77765 8888855544321 24677888888888 899999999974
No 63
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=92.02 E-value=1.2 Score=45.39 Aligned_cols=121 Identities=15% Similarity=0.101 Sum_probs=80.7
Q ss_pred CCCceeccCC---cchHHHHHHHHHHHHHH----------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhc
Q 007703 298 TTHLVFNDDI---QGTASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQT 358 (592)
Q Consensus 298 ~~~~~FNDDi---QGTaaV~LAgll~Alr~----------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~ 358 (592)
..+.+.|--- +.+|=-+++.+|+..|. .+..+.+.+|.|+|.|..|..+|+.+.. .
T Consensus 90 ~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~-----~ 164 (313)
T 2ekl_A 90 RNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTKVGIIANA-----M 164 (313)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHHH-----T
T ss_pred CCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHHH-----C
Confidence 3566666432 23444578888888775 3678999999999999999999998864 2
Q ss_pred CCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHHHHH
Q 007703 359 KAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEAMA 434 (592)
Q Consensus 359 G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv~~Ma 434 (592)
|+ +++.+|+.. . . . ..+ .+ +-...+|.|+++. .|+++=.-- ..++++++.++.|.
T Consensus 165 G~-------~V~~~d~~~----~--~-~-~~~-~~---g~~~~~l~ell~~--aDvVvl~~P~~~~t~~li~~~~l~~mk 223 (313)
T 2ekl_A 165 GM-------KVLAYDILD----I--R-E-KAE-KI---NAKAVSLEELLKN--SDVISLHVTVSKDAKPIIDYPQFELMK 223 (313)
T ss_dssp TC-------EEEEECSSC----C--H-H-HHH-HT---TCEECCHHHHHHH--CSEEEECCCCCTTSCCSBCHHHHHHSC
T ss_pred CC-------EEEEECCCc----c--h-h-HHH-hc---CceecCHHHHHhh--CCEEEEeccCChHHHHhhCHHHHhcCC
Confidence 64 688888641 1 0 0 011 00 1111378898886 888885422 34678899988887
Q ss_pred ccCCCCceEEecCC
Q 007703 435 SFNEVKPLILALSN 448 (592)
Q Consensus 435 ~~~e~rPIIFaLSN 448 (592)
+ .-++.-.|.
T Consensus 224 ~----ga~lIn~ar 233 (313)
T 2ekl_A 224 D----NVIIVNTSR 233 (313)
T ss_dssp T----TEEEEESSC
T ss_pred C----CCEEEECCC
Confidence 5 677777776
No 64
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=91.98 E-value=0.26 Score=53.37 Aligned_cols=45 Identities=22% Similarity=0.301 Sum_probs=30.7
Q ss_pred HHHHHHHHccCCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCC
Q 007703 427 KEVIEAMASFNEVKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSP 475 (592)
Q Consensus 427 ~evv~~Ma~~~e~rPIIFaLSNPt~~aEct~e~A~~wt~G~aifAsGSP 475 (592)
.++++.|.++|. .-+++=.|||. +-+|- -+.++++=++|=.+-||
T Consensus 140 ~~i~~~i~~~~P-~A~~in~tNP~--~i~t~-a~~~~~~~k~vGlC~~~ 184 (477)
T 3u95_A 140 LEIAEKMKKMAP-KAYLMQTANPV--FEITQ-AVRRWTGANIIGFCHGV 184 (477)
T ss_dssp HHHHHHHHHHCT-TCEEEECSSCH--HHHHH-HHHHHHCCCEEEECCGG
T ss_pred HHHHHHHHhhCC-CeEEEEecChH--HHHHH-HHHHhCCCCeEEECCCH
Confidence 689999999999 99999999998 44442 23444444544333333
No 65
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=91.94 E-value=0.21 Score=48.92 Aligned_cols=81 Identities=25% Similarity=0.343 Sum_probs=54.3
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc
Q 007703 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (592)
Q Consensus 316 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~ 395 (592)
.|++.+++..|.++++ +++|+|+|.+|..+|..+.. .|. +++++|++ .++ .......|..
T Consensus 102 ~g~~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~-----~g~-------~v~v~~r~----~~~---~~~l~~~~~~ 161 (263)
T 2d5c_A 102 PGFLEALKAGGIPLKG-PALVLGAGGAGRAVAFALRE-----AGL-------EVWVWNRT----PQR---ALALAEEFGL 161 (263)
T ss_dssp HHHHHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS----HHH---HHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC----HHH---HHHHHHHhcc
Confidence 5888889988889999 99999999999999887754 252 58888874 111 1111112211
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCC
Q 007703 396 EHEPVNNLLDAVKVIKPTILIGSSGVG 422 (592)
Q Consensus 396 ~~~~~~~L~e~V~~vkPtvLIG~S~~~ 422 (592)
. ..++.++ + ++|++|-+...+
T Consensus 162 ~---~~~~~~~-~--~~Divi~~tp~~ 182 (263)
T 2d5c_A 162 R---AVPLEKA-R--EARLLVNATRVG 182 (263)
T ss_dssp E---ECCGGGG-G--GCSEEEECSSTT
T ss_pred c---hhhHhhc-c--CCCEEEEccCCC
Confidence 1 3466666 4 489999766644
No 66
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=91.72 E-value=0.42 Score=46.33 Aligned_cols=109 Identities=15% Similarity=0.211 Sum_probs=61.8
Q ss_pred hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcc--cCCCccCCc-hhchhhcccc--CC
Q 007703 325 IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI--VSSRKDSLQ-HFKKPWAHEH--EP 399 (592)
Q Consensus 325 ~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv--~~~R~~~l~-~~k~~fA~~~--~~ 399 (592)
...++...||.|+|+|..|.++|..+... | .+++++|++-=- .+.....+. .....++... ..
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~-----G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADL-----G-------HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH 80 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee
Confidence 45678889999999999999999988753 5 368888875211 000000000 0012232221 12
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHH-HccCCCCceEEecCCCC
Q 007703 400 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAM-ASFNEVKPLILALSNPT 450 (592)
Q Consensus 400 ~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~M-a~~~e~rPIIFaLSNPt 450 (592)
..++.|+++. +|++| ++.... ...++++.+ +..-+ ..+|.-+|||.
T Consensus 81 ~~~~~e~~~~--aDvVi-lavp~~-~~~~~~~~i~~~~l~-g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 LAAFADVAAG--AELVV-NATEGA-SSIAALTAAGAENLA-GKILVDIANPL 127 (245)
T ss_dssp EEEHHHHHHH--CSEEE-ECSCGG-GHHHHHHHHCHHHHT-TSEEEECCCCE
T ss_pred ccCHHHHHhc--CCEEE-EccCcH-HHHHHHHHhhhhhcC-CCEEEECCCCC
Confidence 3578899986 88877 443332 345666666 43336 77999999974
No 67
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=91.72 E-value=0.28 Score=50.35 Aligned_cols=106 Identities=18% Similarity=0.286 Sum_probs=66.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCC---CCHHHHhc
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV---NNLLDAVK 408 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~---~~L~e~V~ 408 (592)
.||.|+|||+.|.++|.+++.. |+ -+++|+|.+-=..+.-...+.+.. .+....... .++.++++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~------~~V~L~D~~~~~~~~~~~~l~~~~-~~~~~~~~i~~t~d~~ea~~ 77 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----EL------ADVVLYDVVKGMPEGKALDLSHVT-SVVDTNVSVRAEYSYEAALT 77 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSSSHHHHHHHHHHHHH-HHTTCCCCEEEECSHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECChhHHHHHHHHHHhhh-hccCCCCEEEEeCCHHHHhC
Confidence 5899999999999999988763 54 139999986210000000011111 111111111 57888888
Q ss_pred ccCCcEEEeccCCC---CC----------------CCHHHHHHHHccCCCCceEEecCCCCCC
Q 007703 409 VIKPTILIGSSGVG---RT----------------FTKEVIEAMASFNEVKPLILALSNPTSQ 452 (592)
Q Consensus 409 ~vkPtvLIG~S~~~---g~----------------Ft~evv~~Ma~~~e~rPIIFaLSNPt~~ 452 (592)
. .|++|=+.+.+ |. .-+++.+.|.+++. .-+|+=-|||..-
T Consensus 78 ~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p-~a~vi~~tNP~~~ 137 (331)
T 1pzg_A 78 G--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCP-KTFIIVVTNPLDC 137 (331)
T ss_dssp T--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCT-TCEEEECCSSHHH
T ss_pred C--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEEEcCchHH
Confidence 6 89888554333 32 14678888889998 8888888999843
No 68
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.62 E-value=0.44 Score=49.25 Aligned_cols=97 Identities=22% Similarity=0.340 Sum_probs=60.1
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccc----cCCCCCH
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE----HEPVNNL 403 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~----~~~~~~L 403 (592)
.+...+++|+|+|..|..+|+.+.. .|. +++++|++- .+ +...+..+... .....++
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~-----~Ga-------~V~~~d~~~----~~---~~~~~~~~g~~~~~~~~~~~~l 223 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALG-----MGA-------QVTILDVNH----KR---LQYLDDVFGGRVITLTATEANI 223 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSEEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHHHHHhcCceEEEecCCHHHH
Confidence 3778999999999999999887754 362 688888741 11 11111111110 0112357
Q ss_pred HHHhcccCCcEEEeccCCCC-----CCCHHHHHHHHccCCCCceEEecCCC
Q 007703 404 LDAVKVIKPTILIGSSGVGR-----TFTKEVIEAMASFNEVKPLILALSNP 449 (592)
Q Consensus 404 ~e~V~~vkPtvLIG~S~~~g-----~Ft~evv~~Ma~~~e~rPIIFaLSNP 449 (592)
.++++. .|++|.+.+.++ .++++.++.|.+ .-+|.-+|.+
T Consensus 224 ~~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk~----gg~iV~v~~~ 268 (369)
T 2eez_A 224 KKSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMKE----GAVIVDVAVD 268 (369)
T ss_dssp HHHHHH--CSEEEECCC-------CCSCHHHHTTSCT----TCEEEECC--
T ss_pred HHHHhC--CCEEEECCCCCccccchhHHHHHHHhhcC----CCEEEEEecC
Confidence 778875 899999877553 468999988864 5566666643
No 69
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.44 E-value=0.22 Score=49.39 Aligned_cols=49 Identities=24% Similarity=0.356 Sum_probs=39.8
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 315 LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
-.|++.+++..|.++++.+++|+|||.+|.++|..+.. .| .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~-----~G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQ-----AQ-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHH-----TT-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHH-----CC-------CEEEEEECC
Confidence 46788888888889999999999999888888877754 24 468888874
No 70
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=91.36 E-value=1.2 Score=48.56 Aligned_cols=107 Identities=17% Similarity=0.201 Sum_probs=75.1
Q ss_pred HHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccc-cCCCC
Q 007703 323 KLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVN 401 (592)
Q Consensus 323 r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~-~~~~~ 401 (592)
|..+..+.+.+++|+|+|..|.++|..+.. .|. +++.+|++ +.+...|+. +-...
T Consensus 266 r~~~~~l~GktV~IiG~G~IG~~~A~~lka-----~Ga-------~Viv~d~~------------~~~~~~A~~~Ga~~~ 321 (494)
T 3ce6_A 266 RGTDALIGGKKVLICGYGDVGKGCAEAMKG-----QGA-------RVSVTEID------------PINALQAMMEGFDVV 321 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC------------HHHHHHHHHTTCEEC
T ss_pred hccCCCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCC------------HHHHHHHHHcCCEEe
Confidence 456678899999999999999999987754 262 68888764 111112221 11124
Q ss_pred CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCCCCCCCCHHHHh
Q 007703 402 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPTSQSECTAEEAY 461 (592)
Q Consensus 402 ~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~~aEct~e~A~ 461 (592)
++.|+++. .|++|-+++..++++++.++.|.+ .-+|.-.+... .|+..+..+
T Consensus 322 ~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk~----ggilvnvG~~~--~eId~~aL~ 373 (494)
T 3ce6_A 322 TVEEAIGD--ADIVVTATGNKDIIMLEHIKAMKD----HAILGNIGHFD--NEIDMAGLE 373 (494)
T ss_dssp CHHHHGGG--CSEEEECSSSSCSBCHHHHHHSCT----TCEEEECSSSG--GGBCHHHHH
T ss_pred cHHHHHhC--CCEEEECCCCHHHHHHHHHHhcCC----CcEEEEeCCCC--CccCHHHHH
Confidence 68888875 899999988888999899998865 66777777654 356555544
No 71
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=91.28 E-value=0.93 Score=48.02 Aligned_cols=120 Identities=10% Similarity=0.095 Sum_probs=85.6
Q ss_pred CCCceeccCC---cchHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc
Q 007703 298 TTHLVFNDDI---QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (592)
Q Consensus 298 ~~~~~FNDDi---QGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (592)
..+.+.|.-- +.+|=-+++.+|+..|..|..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+
T Consensus 83 ~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~ 150 (381)
T 3oet_A 83 AGIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEAL-----GI-------RTLLCDP 150 (381)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECH
T ss_pred CCEEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECC
Confidence 3555555432 3455568999999999999999999999999999999999988643 64 6777876
Q ss_pred CCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC--------CCCCCCHHHHHHHHccCCCCceEEec
Q 007703 375 KGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG--------VGRTFTKEVIEAMASFNEVKPLILAL 446 (592)
Q Consensus 375 ~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~--------~~g~Ft~evv~~Ma~~~e~rPIIFaL 446 (592)
.. . . .. ......+|.|+++. .|+++=.-- ..++|+++.++.|.+ ..|+.=.
T Consensus 151 ~~----~--~-~~--------~~~~~~sl~ell~~--aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~----gailIN~ 209 (381)
T 3oet_A 151 PR----A--A-RG--------DEGDFRTLDELVQE--ADVLTFHTPLYKDGPYKTLHLADETLIRRLKP----GAILINA 209 (381)
T ss_dssp HH----H--H-TT--------CCSCBCCHHHHHHH--CSEEEECCCCCCSSTTCCTTSBCHHHHHHSCT----TEEEEEC
T ss_pred Ch----H--H-hc--------cCcccCCHHHHHhh--CCEEEEcCcCCccccccchhhcCHHHHhcCCC----CcEEEEC
Confidence 21 0 0 00 11223689999986 888874321 456899999999975 7778777
Q ss_pred CCCC
Q 007703 447 SNPT 450 (592)
Q Consensus 447 SNPt 450 (592)
|.-.
T Consensus 210 aRG~ 213 (381)
T 3oet_A 210 CRGP 213 (381)
T ss_dssp SCGG
T ss_pred CCCc
Confidence 6533
No 72
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.06 E-value=0.34 Score=47.90 Aligned_cols=49 Identities=18% Similarity=0.279 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 315 LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
-.|++.+++..|.++++.+++|+|||.+|..+|..+.. .| .+++++|++
T Consensus 103 ~~G~~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~-----~G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLS-----LD-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHH-----cC-------CEEEEEECC
Confidence 56778888888889999999999999888777777654 25 468888774
No 73
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=90.10 E-value=2 Score=43.83 Aligned_cols=140 Identities=13% Similarity=0.112 Sum_probs=84.2
Q ss_pred eeeecCCCchHHHHHHHHcCCCceeccCCc---chHHHHHHHHHHHHHHh---------------------CCCcccceE
Q 007703 279 IQFEDFANHNAFELLAKYGTTHLVFNDDIQ---GTASVVLAGVVAALKLI---------------------GGTLAEHRF 334 (592)
Q Consensus 279 IqfEDf~~~~Af~lL~ryr~~~~~FNDDiQ---GTaaV~LAgll~Alr~~---------------------g~~l~d~ri 334 (592)
|+.-..+..|- ++-.--+..+.+.|---- .+|=-+++.+|+..|.. |..|.+.+|
T Consensus 80 I~~~~~G~d~i-d~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~v 158 (330)
T 2gcg_A 80 ISTMSVGIDHL-ALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTV 158 (330)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEE
T ss_pred EEECCcccccc-cHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEE
Confidence 55555554442 111111346777775432 34444788888887632 356889999
Q ss_pred EEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcE
Q 007703 335 LFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTI 414 (592)
Q Consensus 335 v~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtv 414 (592)
.|+|.|..|..+|+.+.. .|. +++.+|+.. .+ ....+ .+ .... .+|.|+++. .|+
T Consensus 159 gIIG~G~iG~~iA~~l~~-----~G~-------~V~~~d~~~----~~---~~~~~-~~--g~~~-~~l~e~l~~--aDv 213 (330)
T 2gcg_A 159 GIIGLGRIGQAIARRLKP-----FGV-------QRFLYTGRQ----PR---PEEAA-EF--QAEF-VSTPELAAQ--SDF 213 (330)
T ss_dssp EEECCSHHHHHHHHHHGG-----GTC-------CEEEEESSS----CC---HHHHH-TT--TCEE-CCHHHHHHH--CSE
T ss_pred EEECcCHHHHHHHHHHHH-----CCC-------EEEEECCCC----cc---hhHHH-hc--Ccee-CCHHHHHhh--CCE
Confidence 999999999999998753 363 588888641 11 11111 11 0011 278888876 888
Q ss_pred EEeccC----CCCCCCHHHHHHHHccCCCCceEEecCC
Q 007703 415 LIGSSG----VGRTFTKEVIEAMASFNEVKPLILALSN 448 (592)
Q Consensus 415 LIG~S~----~~g~Ft~evv~~Ma~~~e~rPIIFaLSN 448 (592)
++=.-. ..++++++.++.|.+ ..++.-.|.
T Consensus 214 Vi~~vp~~~~t~~~i~~~~~~~mk~----gailIn~sr 247 (330)
T 2gcg_A 214 IVVACSLTPATEGLCNKDFFQKMKE----TAVFINISR 247 (330)
T ss_dssp EEECCCCCTTTTTCBSHHHHHHSCT----TCEEEECSC
T ss_pred EEEeCCCChHHHHhhCHHHHhcCCC----CcEEEECCC
Confidence 874321 235777888887753 566665554
No 74
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.09 E-value=0.15 Score=51.57 Aligned_cols=104 Identities=17% Similarity=0.283 Sum_probs=59.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccC-CCCCHHHHhcccC
Q 007703 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE-PVNNLLDAVKVIK 411 (592)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~-~~~~L~e~V~~vk 411 (592)
||.|+|||+.|.++|..++. .|+ ...++++|.+---.......+.+.. +|..+.. ...+. ++++.
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~-----~~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~~~i~~~~~-~a~~~-- 67 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGS-----CSELVLVDRDEDRAQAEAEDIAHAA-PVSHGTRVWHGGH-SELAD-- 67 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHTTSC-CTTSCCEEEEECG-GGGTT--
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCCHHHHHHHHHhhhhhh-hhcCCeEEEECCH-HHhCC--
Confidence 89999999999999987754 254 1479999985210000000011100 1111100 00233 56665
Q ss_pred CcEEEeccCCCCC--------------CCHHHHHHHHccCCCCceEEecCCCCC
Q 007703 412 PTILIGSSGVGRT--------------FTKEVIEAMASFNEVKPLILALSNPTS 451 (592)
Q Consensus 412 PtvLIG~S~~~g~--------------Ft~evv~~Ma~~~e~rPIIFaLSNPt~ 451 (592)
.|++|=+.+.+.. .-+++++.|++++. .-+|+-.|||..
T Consensus 68 aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p-~~~vi~~tNP~~ 120 (304)
T 2v6b_A 68 AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAP-DAVLLVTSNPVD 120 (304)
T ss_dssp CSEEEECC------------CHHHHHHHHHHHHHHHHHHCS-SSEEEECSSSHH
T ss_pred CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCC-CeEEEEecCchH
Confidence 8888855544321 11788888988888 878777999984
No 75
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=90.07 E-value=0.38 Score=48.92 Aligned_cols=105 Identities=17% Similarity=0.272 Sum_probs=62.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCC-CCHHHHhccc
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV-NNLLDAVKVI 410 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~-~~L~e~V~~v 410 (592)
.||.|+|||..|.++|-.+... |+ ...++++|.+--..+....+|.+. .++....... .+..++++.
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-----~~-----~~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~~~al~~- 74 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-----GI-----ADEIVLIDANESKAIGDAMDFNHG-KVFAPKPVDIWHGDYDDCRD- 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCEEEECCGGGTTT-
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCcchHHHHHhhHHHH-hhhcCCCeEEEcCcHHHhCC-
Confidence 5999999999999999766542 54 257999998621010000001111 1111100000 123466765
Q ss_pred CCcEEEeccCCCCC--------------CCHHHHHHHHccCCCCceEEecCCCC
Q 007703 411 KPTILIGSSGVGRT--------------FTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 411 kPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
.|++|=+.+++.. .-+++++.|.+++. .-++|=.|||.
T Consensus 75 -aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p-~a~~iv~tNPv 126 (316)
T 1ldn_A 75 -ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGF-QGLFLVATNPV 126 (316)
T ss_dssp -CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTC-CSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCC-CCEEEEeCCch
Confidence 8888855444431 23567788888888 88888889998
No 76
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=89.87 E-value=0.41 Score=51.72 Aligned_cols=106 Identities=16% Similarity=0.289 Sum_probs=66.0
Q ss_pred cccceEEEeCcChH--HHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccc---cCCCCCH
Q 007703 329 LAEHRFLFLGAGEA--GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE---HEPVNNL 403 (592)
Q Consensus 329 l~d~riv~~GAGsA--g~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~---~~~~~~L 403 (592)
.+..||.|+|||+. |.|++..|+.. ..+ . ..++|+|.+- ++-+.+....+.+.+. -.-..++
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~----~~~----~-geV~L~Di~~----e~le~~~~~~~~l~~~~~~I~~TtD~ 69 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSID----ERM----S-GTVALYDLDF----EAAQKNEVIGNHSGNGRWRYEAVSTL 69 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHC----SSC----C-EEEEEECSSH----HHHHHHHHHHTTSTTSCEEEEEESSH
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhc----ccc----C-CeEEEEeCCH----HHHHHHHHHHHHHhccCCeEEEECCH
Confidence 35679999999995 78999888742 122 2 3899999751 1100000000011110 0112579
Q ss_pred HHHhcccCCcEEEeccCCC---------------CCC---------------------CHHHHHHHHccCCCCceEEecC
Q 007703 404 LDAVKVIKPTILIGSSGVG---------------RTF---------------------TKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 404 ~e~V~~vkPtvLIG~S~~~---------------g~F---------------------t~evv~~Ma~~~e~rPIIFaLS 447 (592)
.||++. .|.+|=.-.+| |.. -.++++.|.+++. .-+++-.|
T Consensus 70 ~eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p-~a~~i~~t 146 (450)
T 3fef_A 70 KKALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAP-ESWVINYT 146 (450)
T ss_dssp HHHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCT-TSEEEECC
T ss_pred HHHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCC-CeEEEEec
Confidence 999987 88888433222 221 3577788888999 99999999
Q ss_pred CCC
Q 007703 448 NPT 450 (592)
Q Consensus 448 NPt 450 (592)
||.
T Consensus 147 NPv 149 (450)
T 3fef_A 147 NPM 149 (450)
T ss_dssp SSH
T ss_pred Cch
Confidence 998
No 77
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=89.81 E-value=0.64 Score=47.35 Aligned_cols=101 Identities=16% Similarity=0.267 Sum_probs=64.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccc-cCCCCCHHHHhccc
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVI 410 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~-~~~~~~L~e~V~~v 410 (592)
.||.|+|||..|.|+|..++.. |+ -..++|+|.+-= ..+...++.+ +... -....++ ++++.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~-----~~ev~L~Di~~~-~~g~a~dl~~----~~~~~i~~t~d~-~~l~~- 77 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GI-----ADRLVLLDLSEG-TKGATMDLEI----FNLPNVEISKDL-SASAH- 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECCC------CHHHHHH----HTCTTEEEESCG-GGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CC-----CCEEEEEcCCcc-hHHHHHHHhh----hcCCCeEEeCCH-HHHCC-
Confidence 6899999999999999988643 54 268999998631 1111101221 1111 0111466 77776
Q ss_pred CCcEEEeccCCC--CC-----------CCHHHHHHHHccCCCCceEEecCCCCC
Q 007703 411 KPTILIGSSGVG--RT-----------FTKEVIEAMASFNEVKPLILALSNPTS 451 (592)
Q Consensus 411 kPtvLIG~S~~~--g~-----------Ft~evv~~Ma~~~e~rPIIFaLSNPt~ 451 (592)
.|++|=+.+.+ |- .-+++++.|.+++. .-+|+-.|||..
T Consensus 78 -aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p-~a~iiv~sNP~~ 129 (303)
T 2i6t_A 78 -SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQ-HSVLLVASQPVE 129 (303)
T ss_dssp -CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTT-TCEEEECSSSHH
T ss_pred -CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEcCChHH
Confidence 89888555443 10 13578888888898 999888999983
No 78
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=89.77 E-value=1.4 Score=43.45 Aligned_cols=81 Identities=20% Similarity=0.192 Sum_probs=54.8
Q ss_pred eecCCCchHHHHHHHHcC------CCceeccCCcchHHHHHHHHHHHHHHh-CCCcccceEEEeC-cChHHHHHHHHHHH
Q 007703 281 FEDFANHNAFELLAKYGT------THLVFNDDIQGTASVVLAGVVAALKLI-GGTLAEHRFLFLG-AGEAGTGIAELIAL 352 (592)
Q Consensus 281 fEDf~~~~Af~lL~ryr~------~~~~FNDDiQGTaaV~LAgll~Alr~~-g~~l~d~riv~~G-AGsAg~GIA~ll~~ 352 (592)
++-+.-..+.+++++-+. ...+| .|..|.- .--.|++.+++.. +.++++.+++|.| +|.+|.+++..+.+
T Consensus 64 ~~G~~~~~~~~~~~~~~~~~~gavnt~~~-~~~~G~n-Td~~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~~ 141 (287)
T 1lu9_A 64 VGGGDMAAGERVFEAVKKRFFGPFRVSCM-LDSNGSN-TTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAG 141 (287)
T ss_dssp EECSCHHHHHHHHHHHHHHCBTTBCCEEE-ECSTTHH-HHHHHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHHH
T ss_pred EccchHHHHHHHHHHHHHhcCCCeEEEEe-cCCCcCC-chHHHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 454445577777776652 22344 3445532 2356777888777 7889999999999 89888888887764
Q ss_pred HHHHhcCCChhhhcCcEEEEccC
Q 007703 353 EISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 353 ~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.|. +++++|++
T Consensus 142 -----~G~-------~V~i~~R~ 152 (287)
T 1lu9_A 142 -----EGA-------EVVLCGRK 152 (287)
T ss_dssp -----TTC-------EEEEEESS
T ss_pred -----CcC-------EEEEEECC
Confidence 363 38888874
No 79
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=89.75 E-value=3.3 Score=42.38 Aligned_cols=93 Identities=12% Similarity=0.162 Sum_probs=61.1
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHH
Q 007703 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (592)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e 405 (592)
|..|.+.+|.|+|.|..|..+|+.+.. .|. +++.+|+.. .. ...+ .+ .-...+|.|
T Consensus 145 ~~~l~g~~vgIIG~G~iG~~iA~~l~~-----~G~-------~V~~~d~~~----~~----~~~~-~~---g~~~~~l~~ 200 (334)
T 2dbq_A 145 GYDVYGKTIGIIGLGRIGQAIAKRAKG-----FNM-------RILYYSRTR----KE----EVER-EL---NAEFKPLED 200 (334)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSC----CH----HHHH-HH---CCEECCHHH
T ss_pred ccCCCCCEEEEEccCHHHHHHHHHHHh-----CCC-------EEEEECCCc----ch----hhHh-hc---CcccCCHHH
Confidence 457889999999999999999998864 263 688888742 10 0010 11 011247888
Q ss_pred HhcccCCcEEEecc-C---CCCCCCHHHHHHHHccCCCCceEEecCC
Q 007703 406 AVKVIKPTILIGSS-G---VGRTFTKEVIEAMASFNEVKPLILALSN 448 (592)
Q Consensus 406 ~V~~vkPtvLIG~S-~---~~g~Ft~evv~~Ma~~~e~rPIIFaLSN 448 (592)
+++. .|+++=.- . ..+++++++++.|.+ ..+|.-.|.
T Consensus 201 ~l~~--aDvVil~vp~~~~t~~~i~~~~~~~mk~----~ailIn~sr 241 (334)
T 2dbq_A 201 LLRE--SDFVVLAVPLTRETYHLINEERLKLMKK----TAILINIAR 241 (334)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBCHHHHHHSCT----TCEEEECSC
T ss_pred HHhh--CCEEEECCCCChHHHHhhCHHHHhcCCC----CcEEEECCC
Confidence 8886 88877432 2 225777888887764 667776663
No 80
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=89.54 E-value=0.42 Score=48.78 Aligned_cols=111 Identities=14% Similarity=0.079 Sum_probs=65.9
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC--Ccc--cCCCccCCchhchhhccccCCCCCHHHH
Q 007703 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK--GLI--VSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (592)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~--GLv--~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 406 (592)
.||+|.|| |..|..++..|+. .|+-...-...++++|.+ ..- ..+...+|.+.-.+|..+-....++.++
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTA 80 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHH
Confidence 58999998 9999998887754 244111112479999975 100 0000000111101222221122578899
Q ss_pred hcccCCcEEEeccCCCCC--------------CCHHHHHHHHccC-CCCceEEecCCCC
Q 007703 407 VKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFN-EVKPLILALSNPT 450 (592)
Q Consensus 407 V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~-e~rPIIFaLSNPt 450 (592)
++. .|++|=+.+.+.. .++++++++.+++ . +.+|+=.|||.
T Consensus 81 l~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p-~a~ii~~SNPv 136 (329)
T 1b8p_A 81 FKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASR-NIKVLVVGNPA 136 (329)
T ss_dssp TTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCT-TCEEEECSSSH
T ss_pred hCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEEccCch
Confidence 987 7888855554431 2567888999886 7 77777789998
No 81
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=89.43 E-value=0.67 Score=45.90 Aligned_cols=84 Identities=23% Similarity=0.363 Sum_probs=56.3
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc
Q 007703 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (592)
Q Consensus 316 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~ 395 (592)
.|++.+++..|.++++.+++|+|+|.+|..+|..+... |. +++++|+. .++ .......|.
T Consensus 114 ~G~~~~l~~~~~~~~~~~v~iiGaG~~g~aia~~L~~~-----g~-------~V~v~~r~----~~~---~~~l~~~~g- 173 (275)
T 2hk9_A 114 IGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKE-----GA-------KVFLWNRT----KEK---AIKLAQKFP- 173 (275)
T ss_dssp HHHHHHHHHHCTTGGGSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSS----HHH---HHHHTTTSC-
T ss_pred HHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHc-----CC-------EEEEEECC----HHH---HHHHHHHcC-
Confidence 48888888888899999999999999999998887653 52 68888874 111 111111110
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCC
Q 007703 396 EHEPVNNLLDAVKVIKPTILIGSSGVG 422 (592)
Q Consensus 396 ~~~~~~~L~e~V~~vkPtvLIG~S~~~ 422 (592)
..-..++.++++. +|++|-+...+
T Consensus 174 -~~~~~~~~~~~~~--aDiVi~atp~~ 197 (275)
T 2hk9_A 174 -LEVVNSPEEVIDK--VQVIVNTTSVG 197 (275)
T ss_dssp -EEECSCGGGTGGG--CSEEEECSSTT
T ss_pred -CeeehhHHhhhcC--CCEEEEeCCCC
Confidence 0111267777764 89999766644
No 82
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=89.29 E-value=0.63 Score=47.23 Aligned_cols=99 Identities=16% Similarity=0.346 Sum_probs=61.1
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhch------hhcccc-CCCCCHHH
Q 007703 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK------PWAHEH-EPVNNLLD 405 (592)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~------~fA~~~-~~~~~L~e 405 (592)
||.|+|||+.|.++|..++.. |. ...++++|.+- ++ +..... ++.... -...+ .+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~-----~~~V~l~D~~~----~~---~~~~~~~l~~~~~~~~~~~i~~~d-~~ 63 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GF-----AREMVLIDVDK----KR---AEGDALDLIHGTPFTRRANIYAGD-YA 63 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HH---HHHHHHHHHHHGGGSCCCEEEECC-GG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCCh----HH---HHHHHHHHHhhhhhcCCcEEEeCC-HH
Confidence 799999999999999887653 54 14799999851 11 111111 111000 00123 35
Q ss_pred HhcccCCcEEEeccCCCCC--------------CCHHHHHHHHccCCCCceEEecCCCCCC
Q 007703 406 AVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEVKPLILALSNPTSQ 452 (592)
Q Consensus 406 ~V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~e~rPIIFaLSNPt~~ 452 (592)
+++. .|++|=+.+.+.. .-+++++.|.+++. .-+|+-.|||...
T Consensus 64 ~~~~--aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~-~~~ii~~tNp~~~ 121 (319)
T 1a5z_A 64 DLKG--SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAP-DSIVIVVTNPVDV 121 (319)
T ss_dssp GGTT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEECSSSHHH
T ss_pred HhCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEEeCCcHHH
Confidence 5654 8888754444331 12688888988888 7788889999843
No 83
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=89.19 E-value=0.65 Score=41.47 Aligned_cols=37 Identities=22% Similarity=0.388 Sum_probs=28.3
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+.+...+|+|+|+|..|..+|+.+.. .| .+++++|++
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~-----~g-------~~V~vid~~ 51 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASS-----SG-------HSVVVVDKN 51 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 44567899999999999999988754 25 368889875
No 84
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=89.07 E-value=0.45 Score=48.08 Aligned_cols=103 Identities=17% Similarity=0.264 Sum_probs=62.5
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc--CCcccCCCccCCchhchhhccccCC-CCCHHHHhc
Q 007703 333 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSSRKDSLQHFKKPWAHEHEP-VNNLLDAVK 408 (592)
Q Consensus 333 riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~--~GLv~~~R~~~l~~~k~~fA~~~~~-~~~L~e~V~ 408 (592)
||+|.| ||..|..++..|+. .|+ ...++|+|. +-=-.++-..+|.+... +.++..- ..+ .++++
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~v~~~~-~~a~~ 69 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIAL-----RDI-----ADEVVFVDIPDKEDDTVGQAADTNHGIA-YDSNTRVRQGG-YEDTA 69 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TTC-----CSEEEEECCGGGHHHHHHHHHHHHHHHT-TTCCCEEEECC-GGGGT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEcCCCChhhHHHHHHHHHHHHh-hCCCcEEEeCC-HHHhC
Confidence 899999 99999998887754 254 256999997 31000000001211111 1111000 022 56677
Q ss_pred ccCCcEEEeccCCC---CC-----------CCHHHHHHHHccCCCCceEEecCCCC
Q 007703 409 VIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 409 ~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
. .|++|=+.+.+ |. .+++++++|.+++. +.+|+--|||.
T Consensus 70 ~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p-~~~viv~SNPv 122 (303)
T 1o6z_A 70 G--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHND-DYISLTTSNPV 122 (303)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCS-CCEEEECCSSH
T ss_pred C--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEEeCChH
Confidence 5 89888665544 32 36778888999998 99999999997
No 85
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=88.92 E-value=0.32 Score=49.83 Aligned_cols=128 Identities=16% Similarity=0.233 Sum_probs=70.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcccc--CCCCCHHHHhcc
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKV 409 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~--~~~~~L~e~V~~ 409 (592)
.||.|+|||+.|.++|.+++. .|+- +++|+|.+-=..+.-...+.+...++.... ....++ ++++.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~-----~g~~------~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~ 82 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ-----KDLG------DVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQN 82 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCC
Confidence 589999999999999987765 2641 399999852100000000111111111110 011456 77876
Q ss_pred cCCcEEEeccCCC---CC-----------CCHHHHHHHHccCCCCceEEecCCCCCCCCCCHHHHhccc--cCcEEEecC
Q 007703 410 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEVKPLILALSNPTSQSECTAEEAYTWS--KGRAIFASG 473 (592)
Q Consensus 410 vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~e~rPIIFaLSNPt~~aEct~e~A~~wt--~G~aifAsG 473 (592)
.|++|=+.+.+ |. .-+++.+.+.+++. .-+|+=-|||.+-. .+-+.+.+ .-.-+|++|
T Consensus 83 --aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p-~a~viv~tNP~~~~---t~~~~~~~~~~~~rviG~~ 156 (328)
T 2hjr_A 83 --SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCP-NAFVICITNPLDAM---VYYFKEKSGIPANKVCGMS 156 (328)
T ss_dssp --CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCT-TCEEEECCSSHHHH---HHHHHHHHCCCGGGEEESC
T ss_pred --CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCC-CeEEEEecCchHHH---HHHHHHhcCCChhhEEEeC
Confidence 88888554332 21 14567888888888 87776679998432 33333322 122355665
Q ss_pred CCCC
Q 007703 474 SPFD 477 (592)
Q Consensus 474 SPF~ 477 (592)
++.+
T Consensus 157 t~Ld 160 (328)
T 2hjr_A 157 GVLD 160 (328)
T ss_dssp HHHH
T ss_pred cHHH
Confidence 4444
No 86
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=88.74 E-value=1.9 Score=43.50 Aligned_cols=100 Identities=18% Similarity=0.195 Sum_probs=59.0
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc
Q 007703 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (592)
Q Consensus 316 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~ 395 (592)
.|++.+++..| +.|++|+|||.+|.+|+..|... | .+|+++++. .+|.+.|. .+.-
T Consensus 107 ~Gf~~~L~~~~----~k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt----~~ka~~la----~~~~ 162 (269)
T 3phh_A 107 LGFYLSLKQKN----YQNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS----SRGLDFFQ----RLGC 162 (269)
T ss_dssp HHHHHHCC-------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS----CTTHHHHH----HHTC
T ss_pred HHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC----HHHHHHHH----HCCC
Confidence 35666665433 88999999999998888877652 4 578888874 23221121 1110
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCC----CCCCHHHHH-HHHccCCCCceEEecC-CC
Q 007703 396 EHEPVNNLLDAVKVIKPTILIGSSGVG----RTFTKEVIE-AMASFNEVKPLILALS-NP 449 (592)
Q Consensus 396 ~~~~~~~L~e~V~~vkPtvLIG~S~~~----g~Ft~evv~-~Ma~~~e~rPIIFaLS-NP 449 (592)
.......| . ++|++|-++..| -.+.++.+. .+.+ ..+++=++ ||
T Consensus 163 ~~~~~~~l----~--~~DiVInaTp~Gm~~~~~l~~~~l~~~l~~----~~~v~D~vY~P 212 (269)
T 3phh_A 163 DCFMEPPK----S--AFDLIINATSASLHNELPLNKEVLKGYFKE----GKLAYDLAYGF 212 (269)
T ss_dssp EEESSCCS----S--CCSEEEECCTTCCCCSCSSCHHHHHHHHHH----CSEEEESCCSS
T ss_pred eEecHHHh----c--cCCEEEEcccCCCCCCCCCChHHHHhhCCC----CCEEEEeCCCC
Confidence 10111222 1 699999776654 147777665 4544 66777664 44
No 87
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=88.57 E-value=0.61 Score=50.81 Aligned_cols=127 Identities=15% Similarity=0.141 Sum_probs=73.8
Q ss_pred cceEEEeCcChHH--HHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhc-c--ccCC---CCC
Q 007703 331 EHRFLFLGAGEAG--TGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-H--EHEP---VNN 402 (592)
Q Consensus 331 d~riv~~GAGsAg--~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA-~--~~~~---~~~ 402 (592)
..||.|+|||+.| .++|..|+.. .++ +-..++|+|.+- ++-+.+......+. + .... ..+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~----e~l~~~~~~~~~~l~~~~~~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDE----ERLDAILTIAKKYVEEVGADLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCH----HHHHHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCcEEEEECC
Confidence 3589999999965 4446666531 122 136799999853 11110111111111 1 0111 247
Q ss_pred HHHHhcccCCcEEEeccCC---------------CCCCC-------------------------HHHHHHHHccCCCCce
Q 007703 403 LLDAVKVIKPTILIGSSGV---------------GRTFT-------------------------KEVIEAMASFNEVKPL 442 (592)
Q Consensus 403 L~e~V~~vkPtvLIG~S~~---------------~g~Ft-------------------------~evv~~Ma~~~e~rPI 442 (592)
+.++++. .|++|=+.++ .|.|. +++++.|.++|. .-+
T Consensus 71 ~~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P-~A~ 147 (480)
T 1obb_A 71 LDDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSP-KAW 147 (480)
T ss_dssp HHHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCT-TCE
T ss_pred HHHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCC-CeE
Confidence 8889986 8988855532 13333 688999999999 999
Q ss_pred EEecCCCCCCCCCCHHHHhccccCcEEEecCCC
Q 007703 443 ILALSNPTSQSECTAEEAYTWSKGRAIFASGSP 475 (592)
Q Consensus 443 IFaLSNPt~~aEct~e~A~~wt~G~aifAsGSP 475 (592)
|+-.|||.. +..+-+.++..-|+|=.+.+|
T Consensus 148 ii~~TNPvd---i~t~~~~k~p~~rviG~c~~~ 177 (480)
T 1obb_A 148 YLQAANPIF---EGTTLVTRTVPIKAVGFCHGH 177 (480)
T ss_dssp EEECSSCHH---HHHHHHHHHSCSEEEEECSGG
T ss_pred EEEeCCcHH---HHHHHHHHCCCCcEEecCCCH
Confidence 999999982 233344445444443333344
No 88
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=88.46 E-value=0.45 Score=48.66 Aligned_cols=102 Identities=17% Similarity=0.234 Sum_probs=63.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCcc----CCchhchhhcccc--CCCCCHHH
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEH--EPVNNLLD 405 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~----~l~~~k~~fA~~~--~~~~~L~e 405 (592)
.||.|+|||+.|.++|.+++.. |+- +++|+|.+ .++-+ .+.+...+..... ....++ +
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~-----g~~------~v~L~Di~----~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~ 68 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK-----NLG------DVVLFDIV----KNMPHGKALDTSHTNVMAYSNCKVSGSNTY-D 68 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TCC------EEEEECSS----SSHHHHHHHHHHTHHHHHTCCCCEEEECCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC------eEEEEeCC----HHHHHHHHHHHHhhhhhcCCCcEEEECCCH-H
Confidence 4899999999999999888752 651 39999975 22110 0111100111110 011466 7
Q ss_pred HhcccCCcEEEeccCCC---CC----------------CCHHHHHHHHccCCCCceEEecCCCCCC
Q 007703 406 AVKVIKPTILIGSSGVG---RT----------------FTKEVIEAMASFNEVKPLILALSNPTSQ 452 (592)
Q Consensus 406 ~V~~vkPtvLIG~S~~~---g~----------------Ft~evv~~Ma~~~e~rPIIFaLSNPt~~ 452 (592)
+++. .|++|=+.+.+ |. .-+++.+.|.+++. .-+|+=.|||...
T Consensus 69 al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p-~a~iiv~tNP~~~ 131 (322)
T 1t2d_A 69 DLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCP-NAFIIVVTNPVDV 131 (322)
T ss_dssp GGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCT-TSEEEECSSSHHH
T ss_pred HhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCC-CeEEEEecCChHH
Confidence 7876 89888554333 31 35678888888888 8887767999843
No 89
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=88.33 E-value=2.6 Score=43.81 Aligned_cols=192 Identities=15% Similarity=0.097 Sum_probs=110.6
Q ss_pred CCCceeccCC---cchHHHHHHHHHHHHHHh---------------------CCCcccceEEEeCcChHHHHHHHHHHHH
Q 007703 298 TTHLVFNDDI---QGTASVVLAGVVAALKLI---------------------GGTLAEHRFLFLGAGEAGTGIAELIALE 353 (592)
Q Consensus 298 ~~~~~FNDDi---QGTaaV~LAgll~Alr~~---------------------g~~l~d~riv~~GAGsAg~GIA~ll~~~ 353 (592)
..+++.|--- +.+|=-+++-+|+..|.. |..|.+.++.|+|.|..|..+|+.+..
T Consensus 116 ~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~- 194 (345)
T 4g2n_A 116 LGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARG- 194 (345)
T ss_dssp TTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHT-
T ss_pred CCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHH-
Confidence 3555665432 235556788888877642 567899999999999999999998864
Q ss_pred HHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHH
Q 007703 354 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEV 429 (592)
Q Consensus 354 ~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~ev 429 (592)
.|+ +++.+|+... ... .+.......+|.|+++. .|+++=.-- ..+.|+++.
T Consensus 195 ----~G~-------~V~~~dr~~~---------~~~---~~~g~~~~~~l~ell~~--sDvV~l~~Plt~~T~~li~~~~ 249 (345)
T 4g2n_A 195 ----FGL-------AIHYHNRTRL---------SHA---LEEGAIYHDTLDSLLGA--SDIFLIAAPGRPELKGFLDHDR 249 (345)
T ss_dssp ----TTC-------EEEEECSSCC---------CHH---HHTTCEECSSHHHHHHT--CSEEEECSCCCGGGTTCBCHHH
T ss_pred ----CCC-------EEEEECCCCc---------chh---hhcCCeEeCCHHHHHhh--CCEEEEecCCCHHHHHHhCHHH
Confidence 264 6888887531 010 01111112589999986 898884322 237899999
Q ss_pred HHHHHccCCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCC-CCcceeCCeeeCccCCcccccchhhhHHHHHhC
Q 007703 430 IEAMASFNEVKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSP-FDPFEYNGKVFVPGQANNAYIFPGFGLGLVISG 508 (592)
Q Consensus 430 v~~Ma~~~e~rPIIFaLSNPt~~aEct~e~A~~wt~G~aifAsGSP-F~pV~~~G~~~~p~Q~NN~yiFPGiglG~~~s~ 508 (592)
++.|.+ .-|+.=.|.-..--|-.-.+|+ .+|+.-.| |-. |++- - .....-=+..|+.+-|=+|-...-
T Consensus 250 l~~mk~----gailIN~aRG~~vde~aL~~aL--~~g~i~gA-~LDVf~~E-P-~~~~pL~~~~nvilTPHia~~t~e-- 318 (345)
T 4g2n_A 250 IAKIPE----GAVVINISRGDLINDDALIEAL--RSKHLFAA-GLDVFANE-P-AIDPRYRSLDNIFLTPHIGSATHE-- 318 (345)
T ss_dssp HHHSCT----TEEEEECSCGGGBCHHHHHHHH--HHTSEEEE-EESCCTTT-T-SCCTTGGGCTTEEECCSCTTCBHH--
T ss_pred HhhCCC----CcEEEECCCCchhCHHHHHHHH--HhCCceEE-EecCCCCC-C-CCCchHHhCCCEEEcCccCcCCHH--
Confidence 999975 7778777753322233333444 35654332 211 1100 0 000111245688888876632111
Q ss_pred CcccCHHHHHHHHHHHHcccC
Q 007703 509 AIRVHDDMLLAASEALAKQVT 529 (592)
Q Consensus 509 a~~Itd~m~~aAA~aLA~~v~ 529 (592)
-...|...+++-|.....
T Consensus 319 ---~~~~~~~~~~~ni~~~l~ 336 (345)
T 4g2n_A 319 ---TRDAMGWLLIQGIEALNQ 336 (345)
T ss_dssp ---HHHHHHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHHHHHHHHc
Confidence 124555556666655554
No 90
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=88.31 E-value=0.94 Score=48.88 Aligned_cols=103 Identities=11% Similarity=0.154 Sum_probs=64.2
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc-ccCCCCCHHHH
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 406 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~ 406 (592)
.++..+|.|+|+|..|..+|..|.. .|. +++++|+. . +........+.. ......++.|+
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~-----~G~-------~V~v~~r~----~---~~~~~l~~~~~~~gi~~~~s~~e~ 72 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIES-----RGY-------TVSIFNRS----R---EKTEEVIAENPGKKLVPYYTVKEF 72 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS----H---HHHHHHHHHSTTSCEEECSSHHHH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHh-----CCC-------eEEEEeCC----H---HHHHHHHhhCCCCCeEEeCCHHHH
Confidence 3567789999999999999998865 263 57777763 1 112122111100 01123578888
Q ss_pred hccc-CCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCC
Q 007703 407 VKVI-KPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 407 V~~v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
++.. +||++| ++-+.+..++++++.+.+.-+..-||.-+||-.
T Consensus 73 v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 73 VESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HHTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred HhCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 8753 478777 555455568889988876543156888899865
No 91
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=88.06 E-value=0.49 Score=49.50 Aligned_cols=37 Identities=27% Similarity=0.450 Sum_probs=33.3
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+|++.||+|+|||..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~a-----GV------g~ItlvD~D 67 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 67 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCC
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHc-----CC------CEEEEecCC
Confidence 57789999999999999999999875 87 799999986
No 92
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=88.05 E-value=2.6 Score=43.47 Aligned_cols=108 Identities=16% Similarity=0.276 Sum_probs=72.6
Q ss_pred hHHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEE
Q 007703 310 TASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC 370 (592)
Q Consensus 310 TaaV~LAgll~Alr~-------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~ 370 (592)
+|=-+++-+|+..|. .|..|.+.+|.|+|.|..|..+|+.+.. .|+ +++
T Consensus 124 vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~ 191 (333)
T 3ba1_A 124 VADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAERAEA-----FDC-------PIS 191 (333)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHHHHHHHT-----TTC-------CEE
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEE
Confidence 344467777776553 2467899999999999999999998754 263 588
Q ss_pred EEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHHHHccCCCCceEEec
Q 007703 371 LVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEVKPLILAL 446 (592)
Q Consensus 371 lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~e~rPIIFaL 446 (592)
.+|+..- . ... + ....+|.|+++. .|+++=.- ...++++++.++.|.+ ..+|.-.
T Consensus 192 ~~dr~~~----~---~~g----~----~~~~~l~ell~~--aDvVil~vP~~~~t~~li~~~~l~~mk~----gailIn~ 250 (333)
T 3ba1_A 192 YFSRSKK----P---NTN----Y----TYYGSVVELASN--SDILVVACPLTPETTHIINREVIDALGP----KGVLINI 250 (333)
T ss_dssp EECSSCC----T---TCC----S----EEESCHHHHHHT--CSEEEECSCCCGGGTTCBCHHHHHHHCT----TCEEEEC
T ss_pred EECCCch----h---ccC----c----eecCCHHHHHhc--CCEEEEecCCChHHHHHhhHHHHhcCCC----CCEEEEC
Confidence 8887421 1 111 1 012478888875 88877432 1246888889998864 6677766
Q ss_pred CCCC
Q 007703 447 SNPT 450 (592)
Q Consensus 447 SNPt 450 (592)
|.-.
T Consensus 251 srG~ 254 (333)
T 3ba1_A 251 GRGP 254 (333)
T ss_dssp SCGG
T ss_pred CCCc
Confidence 6543
No 93
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=87.86 E-value=2.6 Score=42.78 Aligned_cols=108 Identities=16% Similarity=0.195 Sum_probs=73.2
Q ss_pred hHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEE
Q 007703 310 TASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL 371 (592)
Q Consensus 310 TaaV~LAgll~Alr~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~l 371 (592)
+|=-+++.+|+..|. .|..|.+.++.|+|.|..|..+|+.+.. .|+ +++.
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~-----~G~-------~V~~ 170 (307)
T 1wwk_A 103 VAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANA-----LGM-------NILL 170 (307)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEE
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHHHHH-----CCC-------EEEE
Confidence 444568888887663 2467899999999999999999998864 264 6888
Q ss_pred EccCCcccCCCccCCchhchhhccc-cCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHHHHHccCCCCceEEec
Q 007703 372 VDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEVKPLILAL 446 (592)
Q Consensus 372 vD~~GLv~~~R~~~l~~~k~~fA~~-~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv~~Ma~~~e~rPIIFaL 446 (592)
+|+.. + . ..+.+ .-...+|.|+++. .|+++=.-- ..++++++.++.|.+ .-++.=.
T Consensus 171 ~d~~~-------~---~---~~~~~~g~~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~mk~----ga~lin~ 231 (307)
T 1wwk_A 171 YDPYP-------N---E---ERAKEVNGKFVDLETLLKE--SDVVTIHVPLVESTYHLINEERLKLMKK----TAILINT 231 (307)
T ss_dssp ECSSC-------C---H---HHHHHTTCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHHHSCT----TCEEEEC
T ss_pred ECCCC-------C---h---hhHhhcCccccCHHHHHhh--CCEEEEecCCChHHhhhcCHHHHhcCCC----CeEEEEC
Confidence 88741 1 1 01111 1111378898875 888884421 346888999988875 6677777
Q ss_pred CC
Q 007703 447 SN 448 (592)
Q Consensus 447 SN 448 (592)
|.
T Consensus 232 ar 233 (307)
T 1wwk_A 232 SR 233 (307)
T ss_dssp SC
T ss_pred CC
Confidence 76
No 94
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=87.83 E-value=1.7 Score=45.19 Aligned_cols=97 Identities=10% Similarity=0.206 Sum_probs=62.1
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccc-cCCCCCHHHHh
Q 007703 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAV 407 (592)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~-~~~~~~L~e~V 407 (592)
++..||.|+|.|..|..+|..|... | .+++++|+. . +.+. .++.. .....++.|++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~-----G-------~~V~v~dr~----~---~~~~----~l~~~g~~~~~s~~e~~ 76 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKG-----G-------HECVVYDLN----V---NAVQ----ALEREGIAGARSIEEFC 76 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC----H---HHHH----HHHTTTCBCCSSHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCC----H---HHHH----HHHHCCCEEeCCHHHHH
Confidence 3467999999999999999988753 5 367777763 1 1111 22221 12336888988
Q ss_pred ccc-CCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCC
Q 007703 408 KVI-KPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 408 ~~v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
+.. +||++| ++...+ -.+++++.+.+.-+..-||.-+||-.
T Consensus 77 ~~a~~~DvVi-~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~~ 118 (358)
T 4e21_A 77 AKLVKPRVVW-LMVPAA-VVDSMLQRMTPLLAANDIVIDGGNSH 118 (358)
T ss_dssp HHSCSSCEEE-ECSCGG-GHHHHHHHHGGGCCTTCEEEECSSCC
T ss_pred hcCCCCCEEE-EeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCCC
Confidence 874 668877 333333 67888888876543267888777643
No 95
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=87.66 E-value=3.6 Score=44.03 Aligned_cols=193 Identities=13% Similarity=0.178 Sum_probs=116.8
Q ss_pred cCCCceeccCC---cchHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHH
Q 007703 297 GTTHLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (592)
Q Consensus 297 r~~~~~FNDDi---QGTaaV~LAgll~Alr~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~ 355 (592)
+..+++||--- +.+|=-++|.+|+..|. .+..|.+.++.|+|-|..|..+|+.+...
T Consensus 101 ~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l~~~-- 178 (416)
T 3k5p_A 101 KRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAESL-- 178 (416)
T ss_dssp HTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred hcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHHHHHHHHHC--
Confidence 45788888643 33555678888888764 25678999999999999999999987542
Q ss_pred HhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHH
Q 007703 356 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIE 431 (592)
Q Consensus 356 ~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~ 431 (592)
|+ +++.+|+..- .... -+ ....+|.|+++. .|+++=.- ...+.|+++.++
T Consensus 179 ---G~-------~V~~yd~~~~--------~~~~---~~---~~~~sl~ell~~--aDvV~lhvPlt~~T~~li~~~~l~ 232 (416)
T 3k5p_A 179 ---GM-------TVRYYDTSDK--------LQYG---NV---KPAASLDELLKT--SDVVSLHVPSSKSTSKLITEAKLR 232 (416)
T ss_dssp ---TC-------EEEEECTTCC--------CCBT---TB---EECSSHHHHHHH--CSEEEECCCC-----CCBCHHHHH
T ss_pred ---CC-------EEEEECCcch--------hccc---Cc---EecCCHHHHHhh--CCEEEEeCCCCHHHhhhcCHHHHh
Confidence 64 6888887411 1100 01 123689999986 88887432 123689999999
Q ss_pred HHHccCCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCC-CC--cceeCCeeeCc-cCCcccccchhhhHHHHHh
Q 007703 432 AMASFNEVKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSP-FD--PFEYNGKVFVP-GQANNAYIFPGFGLGLVIS 507 (592)
Q Consensus 432 ~Ma~~~e~rPIIFaLSNPt~~aEct~e~A~~wt~G~aifAsGSP-F~--pV~~~G~~~~p-~Q~NN~yiFPGiglG~~~s 507 (592)
.|.+ ..++.=.|.=..--|-.-.+|++ .|+.- +.|.. |+ |..-+.....| -+..|+.+-|=+|-...-+
T Consensus 233 ~mk~----gailIN~aRG~vvd~~aL~~aL~--~g~i~-gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea 305 (416)
T 3k5p_A 233 KMKK----GAFLINNARGSDVDLEALAKVLQ--EGHLA-GAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEA 305 (416)
T ss_dssp HSCT----TEEEEECSCTTSBCHHHHHHHHH--TTSEE-EEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHH
T ss_pred hCCC----CcEEEECCCChhhhHHHHHHHHH--cCCcc-EEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHH
Confidence 9975 77888777654333333334443 56543 22222 21 11100000011 2456899999876432222
Q ss_pred CCcccCHHHHHHHHHHHHcccC
Q 007703 508 GAIRVHDDMLLAASEALAKQVT 529 (592)
Q Consensus 508 ~a~~Itd~m~~aAA~aLA~~v~ 529 (592)
-+.|...+++.|.+.+.
T Consensus 306 -----~~~~~~~~~~nl~~~l~ 322 (416)
T 3k5p_A 306 -----QERIGTEVTRKLVEYSD 322 (416)
T ss_dssp -----HHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHh
Confidence 24566666777766653
No 96
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=87.64 E-value=0.45 Score=46.07 Aligned_cols=99 Identities=14% Similarity=0.232 Sum_probs=60.9
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHH
Q 007703 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (592)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 406 (592)
.++...||.|+|+|..|..+|..+... |. +.++++|++. +.+......+ ......++.|+
T Consensus 6 ~~~~~m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~~-------~~~~~~~~~~--g~~~~~~~~~~ 65 (266)
T 3d1l_A 6 RSIEDTPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRTE-------ESARELAQKV--EAEYTTDLAEV 65 (266)
T ss_dssp -CGGGCCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSH-------HHHHHHHHHT--TCEEESCGGGS
T ss_pred cCCCCCeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCCH-------HHHHHHHHHc--CCceeCCHHHH
Confidence 345567999999999999999988653 53 2377887631 1121111111 00112467677
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHccC-CCCceEEecCCCC
Q 007703 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EVKPLILALSNPT 450 (592)
Q Consensus 407 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~-e~rPIIFaLSNPt 450 (592)
++ ++|++|=+.. ... .+++++.+.+.. + ..+|.-+||-.
T Consensus 66 ~~--~~Dvvi~av~-~~~-~~~v~~~l~~~~~~-~~ivv~~s~~~ 105 (266)
T 3d1l_A 66 NP--YAKLYIVSLK-DSA-FAELLQGIVEGKRE-EALMVHTAGSI 105 (266)
T ss_dssp CS--CCSEEEECCC-HHH-HHHHHHHHHTTCCT-TCEEEECCTTS
T ss_pred hc--CCCEEEEecC-HHH-HHHHHHHHHhhcCC-CcEEEECCCCC
Confidence 76 4888884333 333 388888887654 5 67888888854
No 97
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=87.57 E-value=3 Score=45.58 Aligned_cols=98 Identities=15% Similarity=0.247 Sum_probs=56.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCch-hchhhcc-c--cCCCCC-HHH
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAH-E--HEPVNN-LLD 405 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~-~k~~fA~-~--~~~~~~-L~e 405 (592)
+.||||+|||+.|-+||.+|++. .++. ..+|.+.|++- .+.+ +.+ ....+.. + ...... |..
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~----~dv~----~~~I~vaD~~~----~~~~-~~~~~g~~~~~~~Vdadnv~~~l~a 79 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEK----FDIK----PSQVTIIAAEG----TKVD-VAQQYGVSFKLQQITPQNYLEVIGS 79 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHH----BCCC----GGGEEEEESSC----CSCC-HHHHHTCEEEECCCCTTTHHHHTGG
T ss_pred CCCEEEECcCHHHHHHHHHHHhC----CCCc----eeEEEEeccch----hhhh-HHhhcCCceeEEeccchhHHHHHHH
Confidence 57899999999999999999764 3442 14788888742 1111 111 1112221 1 111112 334
Q ss_pred HhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCC
Q 007703 406 AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSN 448 (592)
Q Consensus 406 ~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSN 448 (592)
+|+. +|++|=+| ...++.+++++-.+. .=-.+-++|
T Consensus 80 Ll~~--~DvVIN~s--~~~~~l~Im~aclea---Gv~YlDTa~ 115 (480)
T 2ph5_A 80 TLEE--NDFLIDVS--IGISSLALIILCNQK---GALYINAAT 115 (480)
T ss_dssp GCCT--TCEEEECC--SSSCHHHHHHHHHHH---TCEEEESSC
T ss_pred HhcC--CCEEEECC--ccccCHHHHHHHHHc---CCCEEECCC
Confidence 5554 59999654 336788888876542 223556666
No 98
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=87.42 E-value=3.4 Score=42.32 Aligned_cols=137 Identities=10% Similarity=0.088 Sum_probs=87.2
Q ss_pred eeeecCCCchHHHHHHHHcCCCceeccCCcc---hHHHHHHHHHHHHHH-------------------hCCCcccceEEE
Q 007703 279 IQFEDFANHNAFELLAKYGTTHLVFNDDIQG---TASVVLAGVVAALKL-------------------IGGTLAEHRFLF 336 (592)
Q Consensus 279 IqfEDf~~~~Af~lL~ryr~~~~~FNDDiQG---TaaV~LAgll~Alr~-------------------~g~~l~d~riv~ 336 (592)
|+.--.+..|- ++-.--+..+.+.|---.. +|=-+++.+|+..|. .|..|.+.++.|
T Consensus 73 I~~~~~G~d~i-d~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgI 151 (331)
T 1xdw_A 73 ILTRTAGTDHI-DKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGV 151 (331)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEE
T ss_pred EEEcccccccc-CHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEE
Confidence 55554554442 2111123467777753333 344478888887761 234688999999
Q ss_pred eCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEE
Q 007703 337 LGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILI 416 (592)
Q Consensus 337 ~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLI 416 (592)
+|.|..|..+|+.+.. .|+ +++.+|+.. .. . +. .++. ..+|.|+++. .|+++
T Consensus 152 iG~G~IG~~~A~~l~~-----~G~-------~V~~~d~~~----~~-~-~~----~~~~----~~~l~ell~~--aDvV~ 203 (331)
T 1xdw_A 152 VGLGRIGRVAAQIFHG-----MGA-------TVIGEDVFE----IK-G-IE----DYCT----QVSLDEVLEK--SDIIT 203 (331)
T ss_dssp ECCSHHHHHHHHHHHH-----TTC-------EEEEECSSC----CC-S-CT----TTCE----ECCHHHHHHH--CSEEE
T ss_pred ECcCHHHHHHHHHHHH-----CCC-------EEEEECCCc----cH-H-HH----hccc----cCCHHHHHhh--CCEEE
Confidence 9999999999998864 264 588888742 11 1 11 1111 2378898886 89888
Q ss_pred ec----cCCCCCCCHHHHHHHHccCCCCceEEecCC
Q 007703 417 GS----SGVGRTFTKEVIEAMASFNEVKPLILALSN 448 (592)
Q Consensus 417 G~----S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSN 448 (592)
=. ....++++++.++.|.+ .-++.=.|.
T Consensus 204 ~~~p~t~~t~~li~~~~l~~mk~----ga~lin~sr 235 (331)
T 1xdw_A 204 IHAPYIKENGAVVTRDFLKKMKD----GAILVNCAR 235 (331)
T ss_dssp ECCCCCTTTCCSBCHHHHHTSCT----TEEEEECSC
T ss_pred EecCCchHHHHHhCHHHHhhCCC----CcEEEECCC
Confidence 63 22346899999988875 677877774
No 99
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=87.41 E-value=0.78 Score=46.13 Aligned_cols=99 Identities=15% Similarity=0.180 Sum_probs=59.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC--------cccCCCccCCchhchhhccccCCCCCH
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG--------LIVSSRKDSLQHFKKPWAHEHEPVNNL 403 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G--------Lv~~~R~~~l~~~k~~fA~~~~~~~~L 403 (592)
.||.|+|+|+-|..+|..|... | .+++++|+.- +...++ ....++ + ++..-..++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~~~i~~~Gl~~~~~--~~g~~~--~-~~~~~~~~~ 65 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRSDYETVKAKGIRIRSA--TLGDYT--F-RPAAVVRSA 65 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECSTTHHHHHHHCEEEEET--TTCCEE--E-CCSCEESCG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCChHHHHHhCCcEEeec--CCCcEE--E-eeeeeECCH
Confidence 5899999999999999888652 5 4788888753 111110 000000 0 000011345
Q ss_pred HHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCCC
Q 007703 404 LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPTS 451 (592)
Q Consensus 404 ~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~ 451 (592)
.++.+ .+|++| ++... ..++++++.++.+-....+|+.+.|-..
T Consensus 66 ~~~~~--~~DlVi-lavK~-~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 66 AELET--KPDCTL-LCIKV-VEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp GGCSS--CCSEEE-ECCCC-CTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred HHcCC--CCCEEE-EecCC-CChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 55443 478777 44444 3467899999865432678888999764
No 100
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=87.31 E-value=0.47 Score=48.76 Aligned_cols=106 Identities=15% Similarity=0.253 Sum_probs=62.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 410 (592)
..||.|+|||+.|..+|-+|+.. ++ -..++|+|.+-=-.++...+|.+. .+|.++..-..+-.++++.
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~-~~~~~~~~i~~~~~~a~~~- 76 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLSNA-LPFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGGG-
T ss_pred CCEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHhHHHHHHHHHH-HHhcCCeEEEECCHHHhCC-
Confidence 36999999999999988877542 44 268999998410000000002111 1222110000133567776
Q ss_pred CCcEEEeccCCCCCC--------------CHHHHHHHHccCCCCceEEecCCCC
Q 007703 411 KPTILIGSSGVGRTF--------------TKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 411 kPtvLIG~S~~~g~F--------------t~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
.|++|=+.+.+..- -+++++.|.+++. .-+|+-.|||.
T Consensus 77 -aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p-~a~iiv~tNPv 128 (326)
T 2zqz_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGF-NGIFLVAANPV 128 (326)
T ss_dssp -CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTC-CSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CeEEEEeCCcH
Confidence 89988665554321 2456677778888 89999999998
No 101
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=87.29 E-value=3.4 Score=43.02 Aligned_cols=174 Identities=15% Similarity=0.078 Sum_probs=101.7
Q ss_pred CCCceeccCC---cchHHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcChHHHHHHHHHHHHH
Q 007703 298 TTHLVFNDDI---QGTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEI 354 (592)
Q Consensus 298 ~~~~~FNDDi---QGTaaV~LAgll~Alr~--------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~ 354 (592)
..+.+.|--- +.+|=-+++-+|+..|. .+..|.+.++.|+|.|..|..+|+.+..
T Consensus 108 ~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~-- 185 (351)
T 3jtm_A 108 AGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKP-- 185 (351)
T ss_dssp TTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGG--
T ss_pred cCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHH--
Confidence 4555555322 23444577888887753 2567999999999999999999998854
Q ss_pred HHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEec----cCCCCCCCHHHH
Q 007703 355 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGS----SGVGRTFTKEVI 430 (592)
Q Consensus 355 ~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~----S~~~g~Ft~evv 430 (592)
.|+ +++.+|+... .....+.. ......+|.|+++. .|+++=. ....++|+++.+
T Consensus 186 ---~G~-------~V~~~dr~~~-------~~~~~~~~---g~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 243 (351)
T 3jtm_A 186 ---FGC-------NLLYHDRLQM-------APELEKET---GAKFVEDLNEMLPK--CDVIVINMPLTEKTRGMFNKELI 243 (351)
T ss_dssp ---GCC-------EEEEECSSCC-------CHHHHHHH---CCEECSCHHHHGGG--CSEEEECSCCCTTTTTCBSHHHH
T ss_pred ---CCC-------EEEEeCCCcc-------CHHHHHhC---CCeEcCCHHHHHhc--CCEEEECCCCCHHHHHhhcHHHH
Confidence 264 5788887421 01111100 01123589999987 8988833 133468999999
Q ss_pred HHHHccCCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCccee-CCeeeCccCCcccccchhhhHH
Q 007703 431 EAMASFNEVKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLG 503 (592)
Q Consensus 431 ~~Ma~~~e~rPIIFaLSNPt~~aEct~e~A~~wt~G~aifAsGSPF~pV~~-~G~~~~p~Q~NN~yiFPGiglG 503 (592)
+.|.+ ..+|.=.|+-..--|-.-.+|++ +|+.-.|.--=|.+--. .... --+..|+.+-|=++-.
T Consensus 244 ~~mk~----gailIN~aRG~~vde~aL~~aL~--~g~i~ga~lDV~~~EP~~~~~p--L~~~~nvilTPHia~~ 309 (351)
T 3jtm_A 244 GKLKK----GVLIVNNARGAIMERQAVVDAVE--SGHIGGYSGDVWDPQPAPKDHP--WRYMPNQAMTPHTSGT 309 (351)
T ss_dssp HHSCT----TEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSSCCTTCG--GGTSTTBCCCCSCGGG
T ss_pred hcCCC----CCEEEECcCchhhCHHHHHHHHH--hCCccEEEeCCCCCCCCCCCCh--hhcCCCEEECCcCCCC
Confidence 99975 77888777643223333334443 56654333222211100 0000 1234578888876543
No 102
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=87.27 E-value=0.54 Score=48.95 Aligned_cols=95 Identities=18% Similarity=0.310 Sum_probs=61.0
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccc----cCCCCCH
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE----HEPVNNL 403 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~----~~~~~~L 403 (592)
.+...+++|+|+|..|..+|+.+.. .|. +++.+|++. .+ +...+..+... .....++
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~-----~Ga-------~V~~~d~~~----~~---l~~~~~~~g~~~~~~~~~~~~l 225 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANG-----MGA-------TVTVLDINI----DK---LRQLDAEFCGRIHTRYSSAYEL 225 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSSEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeCCH----HH---HHHHHHhcCCeeEeccCCHHHH
Confidence 4778999999999999999987754 362 588888741 11 11111112110 0011357
Q ss_pred HHHhcccCCcEEEeccCCC-----CCCCHHHHHHHHccCCCCceEEecC
Q 007703 404 LDAVKVIKPTILIGSSGVG-----RTFTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 404 ~e~V~~vkPtvLIG~S~~~-----g~Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
.+.++. .|++|.+.+.+ ..++++.++.|.+ .-+|.=+|
T Consensus 226 ~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk~----g~~iV~va 268 (377)
T 2vhw_A 226 EGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMKP----GAVLVDIA 268 (377)
T ss_dssp HHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSCT----TCEEEEGG
T ss_pred HHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCCC----CcEEEEEe
Confidence 777775 89999876554 3578888888864 55666666
No 103
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=87.12 E-value=1.1 Score=45.11 Aligned_cols=100 Identities=21% Similarity=0.313 Sum_probs=59.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCC----chhchhhcccc--CCCCCHHHH
Q 007703 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL----QHFKKPWAHEH--EPVNNLLDA 406 (592)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l----~~~k~~fA~~~--~~~~~L~e~ 406 (592)
||.|+|||..|.++|..+... ++ -.+++++|.+- ++-+.+ .+....+.... ....++.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~~----~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~- 66 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVVE----GIPQGKALDMYESGPVGLFDTKVTGSNDYAD- 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSS----SHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCh----hHHHHHHHhHHhhhhcccCCcEEEECCCHHH-
Confidence 799999999999999887642 22 25799999862 111101 11000010000 01134544
Q ss_pred hcccCCcEEEeccCCC---CC-----------CCHHHHHHHHccCCCCceEEecCCCC
Q 007703 407 VKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 407 V~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
++. .|++|=+.+.+ |- .-+++.+.|++++. .-+|+-.|||.
T Consensus 67 l~~--aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~-~~~viv~tNP~ 121 (310)
T 1guz_A 67 TAN--SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSK-NPIIIVVSNPL 121 (310)
T ss_dssp GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCS-SCEEEECCSSH
T ss_pred HCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEcCch
Confidence 654 88887544332 22 11577788888888 88888899997
No 104
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=87.01 E-value=3 Score=39.91 Aligned_cols=93 Identities=11% Similarity=0.203 Sum_probs=61.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 410 (592)
..||.|+|+|..|..+|..+... |.. ...+++++|++ .++ + ......++.|+++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~----~~~------~------g~~~~~~~~~~~~~- 58 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPS----KKN------T------TLNYMSSNEELARH- 58 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSS----CCS------S------SSEECSCHHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCC----ccc------C------ceEEeCCHHHHHhc-
Confidence 35899999999999999988653 521 01468888874 111 0 00112467788875
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCCCC
Q 007703 411 KPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPTSQ 452 (592)
Q Consensus 411 kPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~~ 452 (592)
+|++| ++..+ -..+++++.+.++.+ ..+|+.++|..+.
T Consensus 59 -~D~vi-~~v~~-~~~~~v~~~l~~~l~-~~~vv~~~~gi~~ 96 (262)
T 2rcy_A 59 -CDIIV-CAVKP-DIAGSVLNNIKPYLS-SKLLISICGGLNI 96 (262)
T ss_dssp -CSEEE-ECSCT-TTHHHHHHHSGGGCT-TCEEEECCSSCCH
T ss_pred -CCEEE-EEeCH-HHHHHHHHHHHHhcC-CCEEEEECCCCCH
Confidence 78776 33333 457888888876666 7788888887753
No 105
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=86.87 E-value=0.43 Score=40.79 Aligned_cols=103 Identities=13% Similarity=0.177 Sum_probs=52.1
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc-ccCCCCCHHHH-
Q 007703 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA- 406 (592)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~- 406 (592)
++..+|+|+|+|..|..+++.+.. .| .+++++|++- .+.+.+......+.. +......|.++
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~-----~g-------~~v~~~d~~~----~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 67 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHR-----MG-------HEVLAVDINE----EKVNAYASYATHAVIANATEENELLSLG 67 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHH-----TT-------CCCEEEESCH----HHHHTTTTTCSEEEECCTTCHHHHHTTT
T ss_pred CcCCcEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCCH----HHHHHHHHhCCEEEEeCCCCHHHHHhcC
Confidence 455789999999999999887754 25 3578888742 111111111001111 11111123222
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCC
Q 007703 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 407 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
++ ++|++|=+.+..-..+..+++...+.+. ..||...+||.
T Consensus 68 ~~--~~d~vi~~~~~~~~~~~~~~~~~~~~~~-~~ii~~~~~~~ 108 (144)
T 2hmt_A 68 IR--NFEYVIVAIGANIQASTLTTLLLKELDI-PNIWVKAQNYY 108 (144)
T ss_dssp GG--GCSEEEECCCSCHHHHHHHHHHHHHTTC-SEEEEECCSHH
T ss_pred CC--CCCEEEECCCCchHHHHHHHHHHHHcCC-CeEEEEeCCHH
Confidence 32 5899986655320112234444444555 66666666665
No 106
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=86.72 E-value=0.58 Score=47.86 Aligned_cols=105 Identities=12% Similarity=0.226 Sum_probs=62.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 411 (592)
.||.|+|||+.|..+|-+|+.. ++ -..++|+|.+-=-.++-..+|.+. .+|.++..-..+..++++.
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~-~~~~~~~~v~~~~~~a~~~-- 72 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GI-----AEEFVIVDVVKDRTKGDALDLEDA-QAFTAPKKIYSGEYSDCKD-- 72 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHGG-GGGSCCCEEEECCGGGGTT--
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHHHHHHHHHHHH-HHhcCCeEEEECCHHHhCC--
Confidence 6999999999999988876543 44 268999998410000000012111 1232210000133567776
Q ss_pred CcEEEeccCCCCC--------------CCHHHHHHHHccCCCCceEEecCCCC
Q 007703 412 PTILIGSSGVGRT--------------FTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 412 PtvLIG~S~~~g~--------------Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
.|++|=+.+.+.. .-+++++.|.+++. .-+|+-.|||.
T Consensus 73 aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p-~a~iiv~tNPv 124 (318)
T 1ez4_A 73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGF-DGIFLVAANPV 124 (318)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTC-CSEEEECSSSH
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeCCcH
Confidence 8988855554421 12456677778898 99999999998
No 107
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=86.59 E-value=0.71 Score=47.13 Aligned_cols=38 Identities=21% Similarity=0.309 Sum_probs=34.3
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.+|++.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~a-----GV------G~i~lvD~D 69 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRC-----GI------GKLLLFDYD 69 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 468999999999999999999999876 76 789999987
No 108
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=86.57 E-value=0.55 Score=46.71 Aligned_cols=49 Identities=22% Similarity=0.261 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 314 ~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
...|++.+++..+.++++.+++|+|||.+|..+|..+.. .| +++++|++
T Consensus 111 d~~G~~~~L~~~~~~l~~k~vlV~GaGgiG~aia~~L~~-----~G--------~V~v~~r~ 159 (287)
T 1nvt_A 111 DGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAK-----DN--------NIIIANRT 159 (287)
T ss_dssp HHHHHHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTS-----SS--------EEEEECSS
T ss_pred CHHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHH-----CC--------CEEEEECC
Confidence 678999999988889999999999998666666665532 13 68888874
No 109
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=86.51 E-value=0.62 Score=47.01 Aligned_cols=95 Identities=21% Similarity=0.317 Sum_probs=56.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchh----hcc----ccCCCCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP----WAH----EHEPVNN 402 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~----fA~----~~~~~~~ 402 (592)
+.||.|+|+|..|..+|..|..+ | .+++++|+..- + .+..++. |-. ...-..+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~~~----~---~~~l~~~g~~~~~~~~~~~~~~~~~ 74 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARRKE----I---VDLINVSHTSPYVEESKITVRATND 74 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSHH----H---HHHHHHHSCBTTBTTCCCCSEEESC
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCCHH----H---HHHHHHhCCcccCCCCeeeEEEeCC
Confidence 46999999999999999988753 5 46888887411 0 1111110 000 0001134
Q ss_pred HHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCCCC
Q 007703 403 LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPTSQ 452 (592)
Q Consensus 403 L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~~ 452 (592)
+.| ++. .|++| ++..+ ...+++++.++. + ..+|..++|..+.
T Consensus 75 ~~~-~~~--aDvVi-l~vk~-~~~~~v~~~l~~--~-~~~vv~~~nGi~~ 116 (335)
T 1z82_A 75 LEE-IKK--EDILV-IAIPV-QYIREHLLRLPV--K-PSMVLNLSKGIEI 116 (335)
T ss_dssp GGG-CCT--TEEEE-ECSCG-GGHHHHHTTCSS--C-CSEEEECCCCCCT
T ss_pred HHH-hcC--CCEEE-EECCH-HHHHHHHHHhCc--C-CCEEEEEeCCCCC
Confidence 555 543 67665 33322 567778777655 5 6678889997654
No 110
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=86.43 E-value=1.2 Score=48.51 Aligned_cols=99 Identities=13% Similarity=0.172 Sum_probs=60.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhch-hhc-cccCCCCCHHHHhcc
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA-HEHEPVNNLLDAVKV 409 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~-~fA-~~~~~~~~L~e~V~~ 409 (592)
.+|.|+|+|..|.++|..|+.. |. +++++|+.- +.+..... ... .......++.|+++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~~-------~~~~~l~~~~~~~~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRTQ-------SKVDHFLANEAKGKSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS-------HHHHHHHHTTTTTSSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCCH-------HHHHHHHcccccCCCeEEeCCHHHHHhc
Confidence 4899999999999999988753 63 678887631 11111111 000 011123578888875
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCC
Q 007703 410 I-KPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 410 v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
. +||++| ++-..+...+++++.+.+..+...||.-+||-.
T Consensus 72 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 72 LKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp SCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred CCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 3 478776 444444457788887776543156788788744
No 111
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=86.41 E-value=0.65 Score=49.23 Aligned_cols=121 Identities=23% Similarity=0.266 Sum_probs=67.3
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHh
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V 407 (592)
.++++||+|+|.|.+|+++|+++.+ .| .++...|.+-.......+.|.....++-..+. -.+.+
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~-----~G-------~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~----~~~~~ 69 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAK-----LG-------AIVTVNDGKPFDENPTAQSLLEEGIKVVCGSH----PLELL 69 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHH-----TT-------CEEEEEESSCGGGCHHHHHHHHTTCEEEESCC----CGGGG
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHh-----CC-------CEEEEEeCCcccCChHHHHHHhCCCEEEECCC----hHHhh
Confidence 4678999999999999999888765 36 47888888521000000011111111110111 11122
Q ss_pred cccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCcceeCCeeeC
Q 007703 408 KVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFV 487 (592)
Q Consensus 408 ~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~~aEct~e~A~~wt~G~aifAsGSPF~pV~~~G~~~~ 487 (592)
+. .+|.+|=.++.+ .=++++.++... . -||| +. +|-++...+++.|-.||| ||||-+
T Consensus 70 ~~-~~d~vv~spgi~-~~~p~~~~a~~~--g-i~v~-------~~----~e~~~~~~~~~~IaVTGT-------nGKTTT 126 (451)
T 3lk7_A 70 DE-DFCYMIKNPGIP-YNNPMVKKALEK--Q-IPVL-------TE----VELAYLVSESQLIGITGS-------NGKTTT 126 (451)
T ss_dssp GS-CEEEEEECTTSC-TTSHHHHHHHHT--T-CCEE-------CH----HHHHHHHCCSEEEEEECS-------SCHHHH
T ss_pred cC-CCCEEEECCcCC-CCChhHHHHHHC--C-CcEE-------eH----HHHHHHhcCCCEEEEECC-------CCHHHH
Confidence 21 268888666655 347777776553 2 4554 22 333444567788889997 676543
No 112
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=86.37 E-value=1.9 Score=43.55 Aligned_cols=114 Identities=16% Similarity=0.160 Sum_probs=63.4
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc
Q 007703 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (592)
Q Consensus 316 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~ 395 (592)
++.+++.... +....+|.|+|+|..|..++..+... .|. ++++++|+. .++ .......+..
T Consensus 122 ~~~la~~~la--~~~~~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----~~~---~~~l~~~~~~ 182 (312)
T 2i99_A 122 VSAIATKFLK--PPSSEVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----KEN---AEKFADTVQG 182 (312)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----HHH---HHHHHHHSSS
T ss_pred HHHHHHHHhC--CCCCcEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHhhC
Confidence 3445553332 44567999999999999998887653 243 578888863 111 2222221110
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecC--CCCCCCCCCH
Q 007703 396 EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALS--NPTSQSECTA 457 (592)
Q Consensus 396 ~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLS--NPt~~aEct~ 457 (592)
......++.|+++. +|++|=+... +++++.. ....+ .-+|+.+| +|. .-|+.+
T Consensus 183 ~~~~~~~~~e~v~~--aDiVi~atp~----~~~v~~~-~~l~~-g~~vi~~g~~~p~-~~el~~ 237 (312)
T 2i99_A 183 EVRVCSSVQEAVAG--ADVIITVTLA----TEPILFG-EWVKP-GAHINAVGASRPD-WRELDD 237 (312)
T ss_dssp CCEECSSHHHHHTT--CSEEEECCCC----SSCCBCG-GGSCT-TCEEEECCCCSTT-CCSBCH
T ss_pred CeEEeCCHHHHHhc--CCEEEEEeCC----CCcccCH-HHcCC-CcEEEeCCCCCCC-ceeccH
Confidence 01124689999986 8988854332 1233321 12224 66888874 353 355543
No 113
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=86.37 E-value=0.71 Score=47.01 Aligned_cols=107 Identities=13% Similarity=0.235 Sum_probs=64.6
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhc-cccCCCCCHHHHhc
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-HEHEPVNNLLDAVK 408 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA-~~~~~~~~L~e~V~ 408 (592)
...||.|+|||+.|..+|-.|+.. |+ -..++|+|.+-=..++....|.+. .+|. ++..-..+..++++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~-----~~-----~~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~~~~~a~~ 73 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ-----SI-----VDELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRVKAGEYSDCH 73 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----CS-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEEEECCGGGGT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEEEeCCHHHhC
Confidence 446999999999999988876542 54 268999997510000000012222 2332 11000013367777
Q ss_pred ccCCcEEEeccCCCCCC--------------CHHHHHHHHccCCCCceEEecCCCC
Q 007703 409 VIKPTILIGSSGVGRTF--------------TKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 409 ~vkPtvLIG~S~~~g~F--------------t~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
. .|++|=+.+.+..- =+++++.|.+++. .-+|+-.|||.
T Consensus 74 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p-~a~viv~tNPv 126 (317)
T 3d0o_A 74 D--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKF-DGIFLVATNPV 126 (317)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTC-CSEEEECSSSH
T ss_pred C--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEecCcH
Confidence 6 89988555544321 2456777788888 88998899998
No 114
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=86.12 E-value=0.66 Score=40.91 Aligned_cols=31 Identities=23% Similarity=0.401 Sum_probs=25.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.|+|+|||.||+-.|..|.+ .|+ ++.++|+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~-----~G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 49999999999999998875 375 47778763
No 115
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=86.10 E-value=0.95 Score=45.33 Aligned_cols=48 Identities=8% Similarity=0.155 Sum_probs=36.6
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 316 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.|+..+++..|.. .+.+++|+|||.+|.+++..|.. .|. ++|+++++.
T Consensus 105 ~G~~~~l~~~~~~-~~~~vlvlGaGgaarav~~~L~~-----~G~------~~i~v~nRt 152 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KNAKVIVHGSGGMAKAVVAAFKN-----SGF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHHTTCC-TTSCEEEECSSTTHHHHHHHHHH-----TTC------CCEEEECSC
T ss_pred HHHHHHHHHhCCC-CCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 5666677766654 56899999999999999887754 365 679988774
No 116
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=86.10 E-value=0.8 Score=46.70 Aligned_cols=98 Identities=22% Similarity=0.339 Sum_probs=60.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc------ccC-CCCCHH
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH------EHE-PVNNLL 404 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~------~~~-~~~~L~ 404 (592)
.||.|+|||+.|..+|-+++. .|+ -..++++|.+ .++ +......+.+ +.. ...+ .
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~-----~~~-----~~ev~L~Di~----~~~---~~g~~~dl~~~~~~~~~~~i~~~~-~ 69 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMAL-----RQT-----ANELVLIDVF----KEK---AIGEAMDINHGLPFMGQMSLYAGD-Y 69 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-----SSEEEEECCC----------CCHHHHHHTTSCCCTTCEEEC--C-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCC----hHH---HHHHHHHHHHhHHhcCCeEEEECC-H
Confidence 589999999999998887654 254 2589999985 222 2211111111 100 0123 4
Q ss_pred HHhcccCCcEEEeccCCCCCC--------------CHHHHHHHHccCCCCceEEecCCCC
Q 007703 405 DAVKVIKPTILIGSSGVGRTF--------------TKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 405 e~V~~vkPtvLIG~S~~~g~F--------------t~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
++++. .|++|=+.+.+..- -+++++.|.+++. .-+|+=.|||.
T Consensus 70 ~a~~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p-~a~viv~tNPv 126 (318)
T 1y6j_A 70 SDVKD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYN-HGVILVVSNPV 126 (318)
T ss_dssp GGGTT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCC-SCEEEECSSSH
T ss_pred HHhCC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCC-CcEEEEecCcH
Confidence 66765 89888555544211 1688889998888 88888899997
No 117
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=86.04 E-value=1.4 Score=42.33 Aligned_cols=99 Identities=15% Similarity=0.225 Sum_probs=59.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 411 (592)
.||.|+|+|..|..+|..+... |.. ..++++++|++ . +.+...++.+ ......++.|+++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~---~~~~V~~~~r~----~---~~~~~~~~~~--g~~~~~~~~e~~~~-- 63 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIV---SSNQIICSDLN----T---ANLKNASEKY--GLTTTTDNNEVAKN-- 63 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----H---HHHHHHHHHH--CCEECSCHHHHHHH--
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCC---CCCeEEEEeCC----H---HHHHHHHHHh--CCEEeCChHHHHHh--
Confidence 4899999999999999988653 531 12478888873 1 1122222111 11223578898886
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCCC
Q 007703 412 PTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPTS 451 (592)
Q Consensus 412 PtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~ 451 (592)
+|++| ++..+ --.+++++.+.++.....+|...++-.+
T Consensus 64 aDvVi-lav~~-~~~~~v~~~l~~~l~~~~~vvs~~~gi~ 101 (247)
T 3gt0_A 64 ADILI-LSIKP-DLYASIINEIKEIIKNDAIIVTIAAGKS 101 (247)
T ss_dssp CSEEE-ECSCT-TTHHHHC---CCSSCTTCEEEECSCCSC
T ss_pred CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 88877 33333 4567888887764331567777777664
No 118
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=86.03 E-value=2.4 Score=44.57 Aligned_cols=178 Identities=14% Similarity=0.063 Sum_probs=100.7
Q ss_pred chHHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcC
Q 007703 309 GTASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 367 (592)
Q Consensus 309 GTaaV~LAgll~Alr~---------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~ 367 (592)
.+|=-+++-+|+..|. .+..|.+.++.|+|-|..|-.+|+.+.. .|+
T Consensus 133 ~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~-----fG~------- 200 (365)
T 4hy3_A 133 PVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSG-----FRA------- 200 (365)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTT-----SCC-------
T ss_pred HHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhh-----CCC-------
Confidence 3455567777776662 2346889999999999999999997743 254
Q ss_pred cEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEe----ccCCCCCCCHHHHHHHHccCCCCceE
Q 007703 368 KICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIG----SSGVGRTFTKEVIEAMASFNEVKPLI 443 (592)
Q Consensus 368 ~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG----~S~~~g~Ft~evv~~Ma~~~e~rPII 443 (592)
+++.+|+.. . ...... ..-...+|.|+++. .|+++= .....++|+++.++.|.+ .-++
T Consensus 201 ~V~~~d~~~----~----~~~~~~----~g~~~~~l~ell~~--aDvV~l~~Plt~~T~~li~~~~l~~mk~----gail 262 (365)
T 4hy3_A 201 RIRVFDPWL----P----RSMLEE----NGVEPASLEDVLTK--SDFIFVVAAVTSENKRFLGAEAFSSMRR----GAAF 262 (365)
T ss_dssp EEEEECSSS----C----HHHHHH----TTCEECCHHHHHHS--CSEEEECSCSSCC---CCCHHHHHTSCT----TCEE
T ss_pred EEEEECCCC----C----HHHHhh----cCeeeCCHHHHHhc--CCEEEEcCcCCHHHHhhcCHHHHhcCCC----CcEE
Confidence 677787641 0 001111 11112579999986 899883 233456899999999975 6778
Q ss_pred EecCCCCCCCCCCHHHHhccccCcEEEecCCCCCcceeCCeee----CccCCcccccchhhhHHHHHhCCcccCHHHHHH
Q 007703 444 LALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVF----VPGQANNAYIFPGFGLGLVISGAIRVHDDMLLA 519 (592)
Q Consensus 444 FaLSNPt~~aEct~e~A~~wt~G~aifAsGSPF~pV~~~G~~~----~p~Q~NN~yiFPGiglG~~~s~a~~Itd~m~~a 519 (592)
.=.|.-..--|-.-.+|++ .|+.- | |- +|. ..... .-=+..|+.+-|=+|-... .-...|...
T Consensus 263 IN~aRG~~vde~aL~~aL~--~g~i~-a-aL---DV~-~~EPl~~~~pL~~~~nvilTPHia~~t~-----e~~~~~~~~ 329 (365)
T 4hy3_A 263 ILLSRADVVDFDALMAAVS--SGHIV-A-AS---DVY-PEEPLPLDHPVRSLKGFIRSAHRAGALD-----SAFKKMGDM 329 (365)
T ss_dssp EECSCGGGSCHHHHHHHHH--TTSSE-E-EE---SCC-SSSSCCTTCGGGTCTTEEECCSCSSCCH-----HHHHHHHHH
T ss_pred EECcCCchhCHHHHHHHHH--cCCce-E-Ee---eCC-CCCCCCCCChhhcCCCEEECCccccCHH-----HHHHHHHHH
Confidence 7777543222322334443 56543 3 31 111 00000 0124567888887664221 122445555
Q ss_pred HHHHHHcccC
Q 007703 520 ASEALAKQVT 529 (592)
Q Consensus 520 AA~aLA~~v~ 529 (592)
+++-|.....
T Consensus 330 ~~~ni~~~~~ 339 (365)
T 4hy3_A 330 VLEDMDLMDR 339 (365)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 6666655554
No 119
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=85.99 E-value=3.3 Score=42.41 Aligned_cols=91 Identities=15% Similarity=0.167 Sum_probs=60.2
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHH
Q 007703 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (592)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 406 (592)
..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. .. ...+..-+. ..+|.|+
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~d~~~----~~----~~~~~~g~~----~~~l~e~ 197 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIP-----FGV-------KLYYWSRHR----KV----NVEKELKAR----YMDIDEL 197 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSC----CH----HHHHHHTEE----ECCHHHH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEECCCc----ch----hhhhhcCce----ecCHHHH
Confidence 67999999999999999999998753 253 688888742 10 011100011 1378888
Q ss_pred hcccCCcEEEeccC----CCCCCCHHHHHHHHccCCCCceEEecCC
Q 007703 407 VKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEVKPLILALSN 448 (592)
Q Consensus 407 V~~vkPtvLIG~S~----~~g~Ft~evv~~Ma~~~e~rPIIFaLSN 448 (592)
++. .|+++=.-. ..++++++.++.|.+ . ++.-.|.
T Consensus 198 l~~--aDiVil~vp~~~~t~~~i~~~~~~~mk~----g-ilin~sr 236 (333)
T 2d0i_A 198 LEK--SDIVILALPLTRDTYHIINEERVKKLEG----K-YLVNIGR 236 (333)
T ss_dssp HHH--CSEEEECCCCCTTTTTSBCHHHHHHTBT----C-EEEECSC
T ss_pred Hhh--CCEEEEcCCCChHHHHHhCHHHHhhCCC----C-EEEECCC
Confidence 875 888874322 235788888888764 6 7766663
No 120
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=85.95 E-value=7 Score=39.58 Aligned_cols=118 Identities=18% Similarity=0.199 Sum_probs=78.4
Q ss_pred cCCCceecc-CCcc--hHHHHHHHHHHHHHHh-----------------CCCcccceEEEeCcChHHHHHHHHHHHHHHH
Q 007703 297 GTTHLVFND-DIQG--TASVVLAGVVAALKLI-----------------GGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (592)
Q Consensus 297 r~~~~~FND-DiQG--TaaV~LAgll~Alr~~-----------------g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (592)
+..+++.|- +... +|=-+++.+|+..|.. +..|.+.++.|+|.|..|..+|+.+..
T Consensus 70 ~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~---- 145 (303)
T 1qp8_A 70 PPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAA---- 145 (303)
T ss_dssp CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHH----
T ss_pred hcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHHH----
Confidence 345777764 3322 3334788888876631 236889999999999999999998764
Q ss_pred hcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHH
Q 007703 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 432 (592)
Q Consensus 357 ~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~ 432 (592)
.|+ +++.+|+..- + . . .....+|.|+++. .|+++=.- ...++|+++.++.
T Consensus 146 -~G~-------~V~~~dr~~~------~---~---~----~~~~~~l~ell~~--aDvV~l~~P~~~~t~~~i~~~~l~~ 199 (303)
T 1qp8_A 146 -LGA-------QVRGFSRTPK------E---G---P----WRFTNSLEEALRE--ARAAVCALPLNKHTRGLVKYQHLAL 199 (303)
T ss_dssp -TTC-------EEEEECSSCC------C---S---S----SCCBSCSHHHHTT--CSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred -CCC-------EEEEECCCcc------c---c---C----cccCCCHHHHHhh--CCEEEEeCcCchHHHHHhCHHHHhh
Confidence 264 5888887532 0 0 0 1122478888875 88887542 2345788888877
Q ss_pred HHccCCCCceEEecCC
Q 007703 433 MASFNEVKPLILALSN 448 (592)
Q Consensus 433 Ma~~~e~rPIIFaLSN 448 (592)
|.+ ..++.=.|.
T Consensus 200 mk~----gailin~sr 211 (303)
T 1qp8_A 200 MAE----DAVFVNVGR 211 (303)
T ss_dssp SCT----TCEEEECSC
T ss_pred CCC----CCEEEECCC
Confidence 764 677777776
No 121
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=85.78 E-value=4 Score=42.33 Aligned_cols=120 Identities=15% Similarity=0.217 Sum_probs=71.0
Q ss_pred hHHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcE
Q 007703 310 TASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 369 (592)
Q Consensus 310 TaaV~LAgll~Alr~--------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i 369 (592)
+|=-+++-+|+..|. .|..|.+.+|.|+|.|..|..+|+.+.. .|+ ++
T Consensus 130 vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~-----~G~-------~V 197 (340)
T 4dgs_A 130 VADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEA-----FGM-------SV 197 (340)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EE
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHH-----CCC-------EE
Confidence 455567777777653 2467899999999999999999998753 264 58
Q ss_pred EEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHHHHccCCCCceEEe
Q 007703 370 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEVKPLILA 445 (592)
Q Consensus 370 ~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~e~rPIIFa 445 (592)
+.+|+.. ... . .+ ....+|.|+++. .|+++=.- ...++++++.++.|.+ .-++.=
T Consensus 198 ~~~dr~~----~~~--~-----~~----~~~~sl~ell~~--aDvVil~vP~t~~t~~li~~~~l~~mk~----gailIN 256 (340)
T 4dgs_A 198 RYWNRST----LSG--V-----DW----IAHQSPVDLARD--SDVLAVCVAASAATQNIVDASLLQALGP----EGIVVN 256 (340)
T ss_dssp EEECSSC----CTT--S-----CC----EECSSHHHHHHT--CSEEEECC----------CHHHHHHTTT----TCEEEE
T ss_pred EEEcCCc----ccc--c-----Cc----eecCCHHHHHhc--CCEEEEeCCCCHHHHHHhhHHHHhcCCC----CCEEEE
Confidence 8888742 110 0 11 113589999986 89888432 2246788888888875 677887
Q ss_pred cCCCCCCCCCCHHHHhc
Q 007703 446 LSNPTSQSECTAEEAYT 462 (592)
Q Consensus 446 LSNPt~~aEct~e~A~~ 462 (592)
.|.-..--|-.-.+|++
T Consensus 257 ~aRG~vvde~aL~~aL~ 273 (340)
T 4dgs_A 257 VARGNVVDEDALIEALK 273 (340)
T ss_dssp CSCC-------------
T ss_pred CCCCcccCHHHHHHHHH
Confidence 77654334444445553
No 122
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=85.68 E-value=0.48 Score=51.05 Aligned_cols=127 Identities=13% Similarity=0.193 Sum_probs=74.5
Q ss_pred ceEEEeCcChH-HHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc--ccC-C---CCCHH
Q 007703 332 HRFLFLGAGEA-GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH--EHE-P---VNNLL 404 (592)
Q Consensus 332 ~riv~~GAGsA-g~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~--~~~-~---~~~L~ 404 (592)
.||.|+|||+. |.+++..|+.. ..++. -+.++|+|.+-- ++|.+.+......+.. ..+ . ..++.
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~----~~ev~L~Di~~~--~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~ 78 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELP----VGELWLVDIPEG--KEKLEIVGALAKRMVEKAGVPIEIHLTLDRR 78 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCC----EEEEEEECCGGG--HHHHHHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCC----CCEEEEEEcCCC--hHHHHHHHHHHHHHHhhcCCCcEEEEeCCHH
Confidence 59999999997 55555555431 12442 267999998530 0111101111112211 001 1 15788
Q ss_pred HHhcccCCcEEEeccCCCCC----------------------------------CCHHHHHHHHccCCCCceEEecCCCC
Q 007703 405 DAVKVIKPTILIGSSGVGRT----------------------------------FTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 405 e~V~~vkPtvLIG~S~~~g~----------------------------------Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
++++. .|++|=+.++++. .-+++++.|.++|. .-+|+=.|||.
T Consensus 79 eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P-~a~ii~~tNPv 155 (450)
T 1s6y_A 79 RALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCP-DAWLINFTNPA 155 (450)
T ss_dssp HHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEECSSSH
T ss_pred HHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCC-CeEEEEeCCcH
Confidence 99987 8998866665431 13588899999999 99999999998
Q ss_pred CCCCCCHHHHhccccCcEEEecC
Q 007703 451 SQSECTAEEAYTWSKGRAIFASG 473 (592)
Q Consensus 451 ~~aEct~e~A~~wt~G~aifAsG 473 (592)
. +..+-+++.+.-.-+|.+|
T Consensus 156 d---ivT~a~~k~~p~~rViG~c 175 (450)
T 1s6y_A 156 G---MVTEAVLRYTKQEKVVGLC 175 (450)
T ss_dssp H---HHHHHHHHHCCCCCEEECC
T ss_pred H---HHHHHHHHhCCCCCEEEeC
Confidence 2 2333344555332455554
No 123
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=85.68 E-value=7.7 Score=41.04 Aligned_cols=120 Identities=18% Similarity=0.174 Sum_probs=82.1
Q ss_pred cCCCceeccCCc---chHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHH
Q 007703 297 GTTHLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (592)
Q Consensus 297 r~~~~~FNDDiQ---GTaaV~LAgll~Alr~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~ 355 (592)
+..+++||---- .+|=-++|.+|+..|. .|..|.+.++.|+|-|..|..+|+.+..
T Consensus 90 ~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~--- 166 (404)
T 1sc6_A 90 KRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAES--- 166 (404)
T ss_dssp HTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHH---
T ss_pred hCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHHHHHHH---
Confidence 356788886433 4455578999988774 2567999999999999999999998764
Q ss_pred HhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHH
Q 007703 356 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIE 431 (592)
Q Consensus 356 ~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~ 431 (592)
.|+ +++.+|+..- ..+. -+ ....+|.|+++. .|+++=.- ...++|+++.++
T Consensus 167 --~G~-------~V~~~d~~~~------~~~~-----~~---~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~ 221 (404)
T 1sc6_A 167 --LGM-------YVYFYDIENK------LPLG-----NA---TQVQHLSDLLNM--SDVVSLHVPENPSTKNMMGAKEIS 221 (404)
T ss_dssp --TTC-------EEEEECSSCC------CCCT-----TC---EECSCHHHHHHH--CSEEEECCCSSTTTTTCBCHHHHH
T ss_pred --CCC-------EEEEEcCCch------hccC-----Cc---eecCCHHHHHhc--CCEEEEccCCChHHHHHhhHHHHh
Confidence 264 5888887421 1010 01 112478888886 88887431 233688888888
Q ss_pred HHHccCCCCceEEecCC
Q 007703 432 AMASFNEVKPLILALSN 448 (592)
Q Consensus 432 ~Ma~~~e~rPIIFaLSN 448 (592)
.|.+ .-++.=.|.
T Consensus 222 ~mk~----ga~lIN~aR 234 (404)
T 1sc6_A 222 LMKP----GSLLINASR 234 (404)
T ss_dssp HSCT----TEEEEECSC
T ss_pred hcCC----CeEEEECCC
Confidence 8875 667777775
No 124
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=85.68 E-value=3 Score=43.47 Aligned_cols=144 Identities=13% Similarity=0.154 Sum_probs=88.3
Q ss_pred eeeecCCCchH-HHHHHHHcCCCceeccCC---cchHHHHHHHHHHHHHH--------------------hCCCcccceE
Q 007703 279 IQFEDFANHNA-FELLAKYGTTHLVFNDDI---QGTASVVLAGVVAALKL--------------------IGGTLAEHRF 334 (592)
Q Consensus 279 IqfEDf~~~~A-f~lL~ryr~~~~~FNDDi---QGTaaV~LAgll~Alr~--------------------~g~~l~d~ri 334 (592)
|+.-..+..|- .+.+.+.+..+.+.|--- +.+|=-+++.+|+..|. .+..|.+.++
T Consensus 88 I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tv 167 (364)
T 2j6i_A 88 VVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTI 167 (364)
T ss_dssp EEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEE
T ss_pred EEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEE
Confidence 66555555542 223333223566666432 23444578888888762 3678999999
Q ss_pred EEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcE
Q 007703 335 LFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTI 414 (592)
Q Consensus 335 v~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtv 414 (592)
.|+|.|..|..+|+.+.. .|+ ++++.+|+... .....+ .+ ......+|.|+++. .|+
T Consensus 168 gIIG~G~IG~~vA~~l~~-----~G~------~~V~~~d~~~~-------~~~~~~-~~--g~~~~~~l~ell~~--aDv 224 (364)
T 2j6i_A 168 ATIGAGRIGYRVLERLVP-----FNP------KELLYYDYQAL-------PKDAEE-KV--GARRVENIEELVAQ--ADI 224 (364)
T ss_dssp EEECCSHHHHHHHHHHGG-----GCC------SEEEEECSSCC-------CHHHHH-HT--TEEECSSHHHHHHT--CSE
T ss_pred EEECcCHHHHHHHHHHHh-----CCC------cEEEEECCCcc-------chhHHH-hc--CcEecCCHHHHHhc--CCE
Confidence 999999999999998753 264 23888886421 011111 11 00112478888875 888
Q ss_pred EEeccC----CCCCCCHHHHHHHHccCCCCceEEecCCC
Q 007703 415 LIGSSG----VGRTFTKEVIEAMASFNEVKPLILALSNP 449 (592)
Q Consensus 415 LIG~S~----~~g~Ft~evv~~Ma~~~e~rPIIFaLSNP 449 (592)
++=.-- ..++++++.++.|.+ .-+|.-.|+-
T Consensus 225 V~l~~P~t~~t~~li~~~~l~~mk~----ga~lIn~arG 259 (364)
T 2j6i_A 225 VTVNAPLHAGTKGLINKELLSKFKK----GAWLVNTARG 259 (364)
T ss_dssp EEECCCCSTTTTTCBCHHHHTTSCT----TEEEEECSCG
T ss_pred EEECCCCChHHHHHhCHHHHhhCCC----CCEEEECCCC
Confidence 884422 226888888888864 6778777763
No 125
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=85.61 E-value=2.6 Score=42.92 Aligned_cols=112 Identities=20% Similarity=0.172 Sum_probs=66.1
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc
Q 007703 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (592)
Q Consensus 316 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~ 395 (592)
++.+++..... ....++.|+|+|..|-.+++.+... .+. ++++++|+. .++ ...+...|..
T Consensus 112 ~s~laa~~la~--~~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~----~~~---a~~la~~~~~ 172 (322)
T 1omo_A 112 AGGIAAKYLAR--KNSSVFGFIGCGTQAYFQLEALRRV----FDI------GEVKAYDVR----EKA---AKKFVSYCED 172 (322)
T ss_dssp HHHHHHHHHSC--TTCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHHH
T ss_pred HHHHHHHhccC--CCCCEEEEEcCcHHHHHHHHHHHHh----CCc------cEEEEECCC----HHH---HHHHHHHHHh
Confidence 34555554432 3567999999999998888777542 233 678888873 222 2233333321
Q ss_pred ---ccCCCCCHHHHhcccCCcEEEeccCCC-CCCCHHHHHHHHccCCCCceEEecC--CCCCCCCCCHH
Q 007703 396 ---EHEPVNNLLDAVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEVKPLILALS--NPTSQSECTAE 458 (592)
Q Consensus 396 ---~~~~~~~L~e~V~~vkPtvLIG~S~~~-g~Ft~evv~~Ma~~~e~rPIIFaLS--NPt~~aEct~e 458 (592)
+.. ..++.|++ . .|++|=++..+ ..|..+. ... .-.|+.++ +|. +.|+.++
T Consensus 173 ~~~~~~-~~~~~e~v-~--aDvVi~aTp~~~pv~~~~~------l~~-G~~V~~ig~~~p~-~~el~~~ 229 (322)
T 1omo_A 173 RGISAS-VQPAEEAS-R--CDVLVTTTPSRKPVVKAEW------VEE-GTHINAIGADGPG-KQELDVE 229 (322)
T ss_dssp TTCCEE-ECCHHHHT-S--SSEEEECCCCSSCCBCGGG------CCT-TCEEEECSCCSTT-CCCBCHH
T ss_pred cCceEE-ECCHHHHh-C--CCEEEEeeCCCCceecHHH------cCC-CeEEEECCCCCCC-ccccCHH
Confidence 112 46888988 4 89998665533 1333222 223 56888883 455 6777764
No 126
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=85.55 E-value=0.72 Score=51.83 Aligned_cols=37 Identities=27% Similarity=0.450 Sum_probs=33.3
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+|++.||+|+|||..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 323 kL~~arVLIVGaGGLGs~vA~~La~a-----GV------G~ItLvD~D 359 (615)
T 4gsl_A 323 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 359 (615)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 57789999999999999999999875 87 789999987
No 127
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=85.51 E-value=1.3 Score=43.91 Aligned_cols=94 Identities=13% Similarity=0.146 Sum_probs=57.3
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc--CCcccCCCccCCchhchhhcc-------cc-CCCC-
Q 007703 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSSRKDSLQHFKKPWAH-------EH-EPVN- 401 (592)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~--~GLv~~~R~~~l~~~k~~fA~-------~~-~~~~- 401 (592)
||.|+|+|..|..+|..+... | .+++++|+ +.- .++..++...+ .. ....
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~ 62 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGTEFDTE-------ILKSISAGREHPRLGVKLNGVEIFWP 62 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECCGGGHH-------HHHHHHTTCCBTTTTBCCCSEEEECG
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEccCCHH-------HHHHHHHhCcCcccCccccceEEecH
Confidence 799999999999999988653 5 46888887 311 01111100000 00 0112
Q ss_pred -CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCC
Q 007703 402 -NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 402 -~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
++.|+++. .|++|= +... -..+++++.+++..+ ..+|..++|-.
T Consensus 63 ~~~~~~~~~--~D~vi~-~v~~-~~~~~v~~~i~~l~~-~~~vv~~~ng~ 107 (335)
T 1txg_A 63 EQLEKCLEN--AEVVLL-GVST-DGVLPVMSRILPYLK-DQYIVLISKGL 107 (335)
T ss_dssp GGHHHHHTT--CSEEEE-CSCG-GGHHHHHHHHTTTCC-SCEEEECCCSE
T ss_pred HhHHHHHhc--CCEEEE-cCCh-HHHHHHHHHHhcCCC-CCEEEEEcCcC
Confidence 67777764 787773 3322 367888888876334 66888888865
No 128
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=85.50 E-value=3.2 Score=42.36 Aligned_cols=101 Identities=14% Similarity=0.171 Sum_probs=65.2
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccc----cCCCCCHHH
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE----HEPVNNLLD 405 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~----~~~~~~L~e 405 (592)
...++.|+|+|..|-.+++.+... .++ ++|+++|+. + ...+...+... .... ++.|
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~------~---a~~la~~l~~~~g~~~~~~-~~~e 179 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSAR----FAL------EAILVHDPY------A---SPEILERIGRRCGVPARMA-APAD 179 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECTT------C---CHHHHHHHHHHHTSCEEEC-CHHH
T ss_pred CCcEEEEECccHHHHHHHHHHHHh----CCC------cEEEEECCc------H---HHHHHHHHHHhcCCeEEEe-CHHH
Confidence 457999999999988888776542 233 789999986 2 12233333211 1223 8999
Q ss_pred HhcccCCcEEEeccCCC-CCCCHHHHHHHHccCCCCceEEecCC--CCCCCCCCHHHH
Q 007703 406 AVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEVKPLILALSN--PTSQSECTAEEA 460 (592)
Q Consensus 406 ~V~~vkPtvLIG~S~~~-g~Ft~evv~~Ma~~~e~rPIIFaLSN--Pt~~aEct~e~A 460 (592)
+++. .|++|-++... .+|..+.+ .+ ..+|..++. |. +-|+.++-.
T Consensus 180 av~~--aDIVi~aT~s~~pvl~~~~l------~~-G~~V~~vGs~~p~-~~El~~~~~ 227 (313)
T 3hdj_A 180 IAAQ--ADIVVTATRSTTPLFAGQAL------RA-GAFVGAIGSSLPH-TRELDDEAL 227 (313)
T ss_dssp HHHH--CSEEEECCCCSSCSSCGGGC------CT-TCEEEECCCSSTT-CCCCCHHHH
T ss_pred HHhh--CCEEEEccCCCCcccCHHHc------CC-CcEEEECCCCCCc-hhhcCHHHH
Confidence 9987 99999765543 24444322 24 678888865 44 578888754
No 129
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=85.43 E-value=5.3 Score=40.60 Aligned_cols=117 Identities=18% Similarity=0.183 Sum_probs=78.9
Q ss_pred CCCceeccCCc---chHHHHHHHHHHHHHHh---------------------CCCcccceEEEeCcChHHHHHHHHHHHH
Q 007703 298 TTHLVFNDDIQ---GTASVVLAGVVAALKLI---------------------GGTLAEHRFLFLGAGEAGTGIAELIALE 353 (592)
Q Consensus 298 ~~~~~FNDDiQ---GTaaV~LAgll~Alr~~---------------------g~~l~d~riv~~GAGsAg~GIA~ll~~~ 353 (592)
..+.+.|---- .+|=-+++.+|+..|.. |..+.+.+|.|+|.|..|..+|+.+..
T Consensus 87 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~- 165 (311)
T 2cuk_A 87 RGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALA- 165 (311)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHH-
T ss_pred CCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHH-
Confidence 45666664322 33444688888876532 456889999999999999999998764
Q ss_pred HHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHH
Q 007703 354 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEV 429 (592)
Q Consensus 354 ~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~ev 429 (592)
.|+ +++.+|+.. .. .. + ...+|.|+++. .|+++=.- ...++++++.
T Consensus 166 ----~G~-------~V~~~d~~~----~~---~~------~----~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~ 215 (311)
T 2cuk_A 166 ----FGM-------RVVYHARTP----KP---LP------Y----PFLSLEELLKE--ADVVSLHTPLTPETHRLLNRER 215 (311)
T ss_dssp ----TTC-------EEEEECSSC----CS---SS------S----CBCCHHHHHHH--CSEEEECCCCCTTTTTCBCHHH
T ss_pred ----CCC-------EEEEECCCC----cc---cc------c----ccCCHHHHHhh--CCEEEEeCCCChHHHhhcCHHH
Confidence 264 688888742 11 11 1 13578898886 89888552 2346788888
Q ss_pred HHHHHccCCCCceEEecCCC
Q 007703 430 IEAMASFNEVKPLILALSNP 449 (592)
Q Consensus 430 v~~Ma~~~e~rPIIFaLSNP 449 (592)
++.|.+ ..++.=.|.-
T Consensus 216 l~~mk~----ga~lin~srg 231 (311)
T 2cuk_A 216 LFAMKR----GAILLNTARG 231 (311)
T ss_dssp HTTSCT----TCEEEECSCG
T ss_pred HhhCCC----CcEEEECCCC
Confidence 877754 7788888873
No 130
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=85.30 E-value=0.58 Score=46.59 Aligned_cols=103 Identities=14% Similarity=0.277 Sum_probs=61.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCc-hhchhhcccc--CCCCCHHHHh
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAHEH--EPVNNLLDAV 407 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~-~~k~~fA~~~--~~~~~L~e~V 407 (592)
..||.|+|||+.|..+|..|... |. ..+++++|++---... ..++ .+..++..+. ....+. +++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~-----g~-----~~~V~l~d~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~-~~~ 73 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR-----GI-----AREIVLEDIAKERVEA--EVLDMQHGSSFYPTVSIDGSDDP-EIC 73 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSHHHHHH--HHHHHHHTGGGSTTCEEEEESCG-GGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHH--HHHHHHhhhhhcCCeEEEeCCCH-HHh
Confidence 35899999999999999877642 53 1479999986310000 0010 0111111110 000133 455
Q ss_pred cccCCcEEEeccCCCCCCCH----------------HHHHHHHccCCCCceEEecCCCCC
Q 007703 408 KVIKPTILIGSSGVGRTFTK----------------EVIEAMASFNEVKPLILALSNPTS 451 (592)
Q Consensus 408 ~~vkPtvLIG~S~~~g~Ft~----------------evv~~Ma~~~e~rPIIFaLSNPt~ 451 (592)
+. .|++|=+.+.+. ++ ++++.|++++. ..+|+.++||..
T Consensus 74 ~~--aD~Vii~v~~~~--~~g~~r~~~~~~n~~~~~~~~~~i~~~~~-~~~vi~~~Np~~ 128 (319)
T 1lld_A 74 RD--ADMVVITAGPRQ--KPGQSRLELVGATVNILKAIMPNLVKVAP-NAIYMLITNPVD 128 (319)
T ss_dssp TT--CSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCT-TSEEEECCSSHH
T ss_pred CC--CCEEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CceEEEecCchH
Confidence 53 788875544332 23 88999988877 889999999984
No 131
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=84.94 E-value=0.88 Score=43.32 Aligned_cols=93 Identities=13% Similarity=0.189 Sum_probs=57.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEE-EccCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL-VDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~l-vD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 410 (592)
.||.|+|+|..|..+|..+... |. ++.+ +|++ .+.+....+.+- .....+..++++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-----g~-------~V~~v~~r~-------~~~~~~l~~~~g--~~~~~~~~~~~~~- 81 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-----QI-------PAIIANSRG-------PASLSSVTDRFG--ASVKAVELKDALQ- 81 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-----TC-------CEEEECTTC-------GGGGHHHHHHHT--TTEEECCHHHHTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCC-------HHHHHHHHHHhC--CCcccChHHHHhc-
Confidence 5899999999999999988652 53 4555 5553 112222222221 0111244566664
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCCC
Q 007703 411 KPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPTS 451 (592)
Q Consensus 411 kPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~ 451 (592)
+|++| ++.. ....+++++.++. .+ ..+|+.++||..
T Consensus 82 -aDvVi-lavp-~~~~~~v~~~l~~-~~-~~ivi~~~~g~~ 117 (220)
T 4huj_A 82 -ADVVI-LAVP-YDSIADIVTQVSD-WG-GQIVVDASNAID 117 (220)
T ss_dssp -SSEEE-EESC-GGGHHHHHTTCSC-CT-TCEEEECCCCBC
T ss_pred -CCEEE-EeCC-hHHHHHHHHHhhc-cC-CCEEEEcCCCCC
Confidence 78877 3332 2456777777765 45 669999999984
No 132
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=84.88 E-value=1.4 Score=44.90 Aligned_cols=104 Identities=21% Similarity=0.293 Sum_probs=63.8
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchh-hccccCCCCCHHHHhcc
Q 007703 332 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-WAHEHEPVNNLLDAVKV 409 (592)
Q Consensus 332 ~riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~-fA~~~~~~~~L~e~V~~ 409 (592)
.||+|.| +|..|..++..|+. .|+ -..++++|.+.- .+...+|.+...+ -.+......++.++++.
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~-----~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~g 76 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPL-----VSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTG 76 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTT-----EEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCC
Confidence 5899999 79999998887643 253 256999996421 0000001110000 00000001257788886
Q ss_pred cCCcEEEeccCCCC--------------CCCHHHHHHHHccCCCCceEEecCCCC
Q 007703 410 IKPTILIGSSGVGR--------------TFTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 410 vkPtvLIG~S~~~g--------------~Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
.|++|=+.+.+. ..+++++++|.+++. +.+|+--|||.
T Consensus 77 --aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p-~~~viv~SNPv 128 (326)
T 1smk_A 77 --MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCP-RAIVNLISNPV 128 (326)
T ss_dssp --CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCT-TSEEEECCSSH
T ss_pred --CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEEECCch
Confidence 898885555442 236778888888888 88999999998
No 133
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=84.80 E-value=1.5 Score=42.37 Aligned_cols=97 Identities=15% Similarity=0.128 Sum_probs=56.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhc---hhhccccCCCCCHHHHhcc
Q 007703 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK---KPWAHEHEPVNNLLDAVKV 409 (592)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k---~~fA~~~~~~~~L~e~V~~ 409 (592)
||.|+|+|..|..+|..|... | .+++++|+.- .+.+.+.... ..+ .......+ .++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~-~~~~~~~~-~~~~~~ 63 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----G-------HEVQGWLRVP----QPYCSVNLVETDGSIF-NESLTAND-PDFLAT 63 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSC----CSEEEEEEECTTSCEE-EEEEEESC-HHHHHT
T ss_pred eEEEECcCHHHHHHHHHHHhC-----C-------CCEEEEEcCc----cceeeEEEEcCCCcee-eeeeeecC-ccccCC
Confidence 799999999999999988652 5 3688888752 1111111100 000 00000122 466664
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCCC
Q 007703 410 IKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPTS 451 (592)
Q Consensus 410 vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~ 451 (592)
.|++|= +.... ..+++++.++++.....+|..++|...
T Consensus 64 --~d~vi~-~v~~~-~~~~v~~~l~~~l~~~~~vv~~~~g~~ 101 (291)
T 1ks9_A 64 --SDLLLV-TLKAW-QVSDAVKSLASTLPVTTPILLIHNGMG 101 (291)
T ss_dssp --CSEEEE-CSCGG-GHHHHHHHHHTTSCTTSCEEEECSSSC
T ss_pred --CCEEEE-EecHH-hHHHHHHHHHhhCCCCCEEEEecCCCC
Confidence 788773 33332 368999988865321667777898653
No 134
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=84.42 E-value=0.79 Score=44.98 Aligned_cols=38 Identities=24% Similarity=0.423 Sum_probs=32.4
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
+|++.||+|+|+|..|.-+|+.|+.+ |+ ++|.++|.+-
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d~ 65 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFDT 65 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCCC
Confidence 45678999999999999999998765 76 6899999873
No 135
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=84.22 E-value=2.2 Score=40.35 Aligned_cols=80 Identities=16% Similarity=0.221 Sum_probs=50.0
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHH
Q 007703 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (592)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 406 (592)
..+...||.|+|+|..|..+|..+... | .+++++|++ .. +
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~-----g-------~~V~~~~~~--------~~--------------------~ 54 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIA-----G-------HEVTYYGSK--------DQ--------------------A 54 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECTT--------CC--------------------C
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEcCC--------HH--------------------H
Confidence 346678999999999999999988652 5 368888753 11 2
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCCC
Q 007703 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPTS 451 (592)
Q Consensus 407 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~ 451 (592)
++ +.|++|= +.. ....+++++.+++..+ ..+|.-+||+..
T Consensus 55 ~~--~aD~vi~-av~-~~~~~~v~~~l~~~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 55 TT--LGEIVIM-AVP-YPALAALAKQYATQLK-GKIVVDITNPLN 94 (209)
T ss_dssp SS--CCSEEEE-CSC-HHHHHHHHHHTHHHHT-TSEEEECCCCBC
T ss_pred hc--cCCEEEE-cCC-cHHHHHHHHHHHHhcC-CCEEEEECCCCC
Confidence 22 3565552 222 2345677777765445 668888999653
No 136
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=83.97 E-value=0.77 Score=49.80 Aligned_cols=126 Identities=17% Similarity=0.263 Sum_probs=74.7
Q ss_pred cceEEEeCcChH-HHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhc-c-c-cCC---CCCH
Q 007703 331 EHRFLFLGAGEA-GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-H-E-HEP---VNNL 403 (592)
Q Consensus 331 d~riv~~GAGsA-g~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA-~-~-~~~---~~~L 403 (592)
..||.|+|||+. +.++|..|+. +..++. -..++|+|.+- ++-+.+......+. . . ... ..++
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~---~~~~l~----~~eV~L~Di~~----e~~~~~~~~~~~~l~~~~~~~~I~~t~D~ 96 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLD---HLEEFP----IRKLKLYDNDK----ERQDRIAGACDVFIREKAPDIEFAATTDP 96 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHH---TTTTSC----EEEEEEECSCH----HHHHHHHHHHHHHHHHHCTTSEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHh---CCCCCC----CCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCCEEEEECCH
Confidence 469999999996 5556666543 101432 26799999852 21111111111221 1 0 111 2478
Q ss_pred HHHhcccCCcEEEeccCCCC---------------C-------------------CCHHHHHHHHccCCCCceEEecCCC
Q 007703 404 LDAVKVIKPTILIGSSGVGR---------------T-------------------FTKEVIEAMASFNEVKPLILALSNP 449 (592)
Q Consensus 404 ~e~V~~vkPtvLIG~S~~~g---------------~-------------------Ft~evv~~Ma~~~e~rPIIFaLSNP 449 (592)
.++++. .|++|=+.++++ . .=+++++.|.++|. .-+|+-.|||
T Consensus 97 ~eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P-~A~ii~~TNP 173 (472)
T 1u8x_X 97 EEAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSP-DAWMLNYSNP 173 (472)
T ss_dssp HHHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEECCSC
T ss_pred HHHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCC-CeEEEEeCCc
Confidence 899986 899886655432 1 13588899999999 9999999999
Q ss_pred CCCCCCCHHHHhccccCcEEEecC
Q 007703 450 TSQSECTAEEAYTWSKGRAIFASG 473 (592)
Q Consensus 450 t~~aEct~e~A~~wt~G~aifAsG 473 (592)
.. +..+-+++.+.-.-+|.+|
T Consensus 174 vd---i~T~~~~k~~p~~rViG~c 194 (472)
T 1u8x_X 174 AA---IVAEATRRLRPNSKILNIC 194 (472)
T ss_dssp HH---HHHHHHHHHSTTCCEEECC
T ss_pred HH---HHHHHHHHhCCCCCEEEeC
Confidence 82 2333444544332455543
No 137
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=83.96 E-value=0.97 Score=46.70 Aligned_cols=107 Identities=15% Similarity=0.252 Sum_probs=64.7
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcc
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~ 409 (592)
...||.|+|||..|..+|..|+.. |+ ...+.++|.+-=..++-.-+|.+. .+|.+...-..+..++++.
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~i~~~~~~a~~~ 76 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLEDA-LPFTSPKKIYSAEYSDAKD 76 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCChHHHHHHHhhHhhh-hhhcCCcEEEECcHHHhcC
Confidence 346999999999999999888753 55 258999998310000000012221 1232110001123466765
Q ss_pred cCCcEEEeccCCC---C-----CC------CHHHHHHHHccCCCCceEEecCCCC
Q 007703 410 IKPTILIGSSGVG---R-----TF------TKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 410 vkPtvLIG~S~~~---g-----~F------t~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
.|++|=+.+.+ | +| -+++++.|.+++. .-+|+-.|||.
T Consensus 77 --aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p-~a~ilvvtNPv 128 (326)
T 3vku_A 77 --ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGF-NGIFLVAANPV 128 (326)
T ss_dssp --CSEEEECCCCC----------------CHHHHHHHHHTTTC-CSEEEECSSSH
T ss_pred --CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEccCch
Confidence 88877444433 2 23 2578888999999 99999999998
No 138
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=83.87 E-value=1.4 Score=44.50 Aligned_cols=104 Identities=20% Similarity=0.288 Sum_probs=60.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcccc--CCCCCHHHHhcc
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKV 409 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~--~~~~~L~e~V~~ 409 (592)
.||.|+|||..|.++|-.++. .|+ . + ++|+|.+-=-.++...+|.+...+..... ....++ ++++.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~----~-~-v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~ 70 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KEL----G-D-IVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTAN 70 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC----S-E-EEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC----C-e-EEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCC
Confidence 489999999999999997754 254 1 3 99999751000000000111110010010 001456 77776
Q ss_pred cCCcEEEeccCCCCC--------------CCHHHHHHHHccCCCCceEEecCCCC
Q 007703 410 IKPTILIGSSGVGRT--------------FTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 410 vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
.|++|=+.+.+.. .-+++.+.+.+++. .-+|+--|||.
T Consensus 71 --aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p-~a~vi~~tNPv 122 (309)
T 1ur5_A 71 --SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSP-NAVIIMVNNPL 122 (309)
T ss_dssp --CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCT-TCEEEECCSSH
T ss_pred --CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEEcCCch
Confidence 8988855544421 12467788888888 88887789998
No 139
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=83.87 E-value=2.8 Score=43.34 Aligned_cols=103 Identities=20% Similarity=0.189 Sum_probs=60.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCccc----CCCc--cCCchhchhhccccCCCCCHH
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIV----SSRK--DSLQHFKKPWAHEHEPVNNLL 404 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~----~~R~--~~l~~~k~~fA~~~~~~~~L~ 404 (592)
..||.|+|+|+-|..+|..+... | .+++++|++--.. ..+. ..++..+ +...-.-..++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~-----G-------~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~--l~~~i~~t~d~~ 94 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK-----G-------QKVRLWSYESDHVDEMQAEGVNNRYLPNYP--FPETLKAYCDLK 94 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT-----T-------CCEEEECSCHHHHHHHHHHSSBTTTBTTCC--CCTTEEEESCHH
T ss_pred CCeEEEECccHHHHHHHHHHHHC-----C-------CeEEEEeCCHHHHHHHHHcCCCcccCCCCc--cCCCeEEECCHH
Confidence 36899999999999999988652 5 4677887741100 0000 0011110 000000124788
Q ss_pred HHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCCC
Q 007703 405 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPTS 451 (592)
Q Consensus 405 e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~ 451 (592)
|+++. +|++| ++.+. .+.+++++.++.+.....+|..++|-..
T Consensus 95 ea~~~--aDvVi-laVp~-~~~~~vl~~i~~~l~~~~ivvs~~kGi~ 137 (356)
T 3k96_A 95 ASLEG--VTDIL-IVVPS-FAFHEVITRMKPLIDAKTRIAWGTKGLA 137 (356)
T ss_dssp HHHTT--CCEEE-ECCCH-HHHHHHHHHHGGGCCTTCEEEECCCSCB
T ss_pred HHHhc--CCEEE-ECCCH-HHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 88875 77766 33322 3678888888765432667888888554
No 140
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=83.84 E-value=2.6 Score=43.38 Aligned_cols=189 Identities=15% Similarity=0.245 Sum_probs=110.5
Q ss_pred CCCceeccCC---cchHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHH
Q 007703 298 TTHLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (592)
Q Consensus 298 ~~~~~FNDDi---QGTaaV~LAgll~Alr~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (592)
..+++.|--- +.+|=-+++-+|+..|. .+..|.+.++.|+|.|..|-.+|+.+..
T Consensus 83 ~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~---- 158 (324)
T 3evt_A 83 AGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASA---- 158 (324)
T ss_dssp TTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHH----
T ss_pred CCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHh----
Confidence 4677777542 23444567777777642 2667999999999999999999998864
Q ss_pred hcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEec----cCCCCCCCHHHHHH
Q 007703 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGS----SGVGRTFTKEVIEA 432 (592)
Q Consensus 357 ~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~----S~~~g~Ft~evv~~ 432 (592)
.|+ +++.+|+..- . .......+ ...+|.|+++. .|+++=. ....+.|+++.+..
T Consensus 159 -~G~-------~V~~~dr~~~----~---~~~~~~~~-----~~~~l~ell~~--aDvV~l~lPlt~~t~~li~~~~l~~ 216 (324)
T 3evt_A 159 -LGM-------HVIGVNTTGH----P---ADHFHETV-----AFTATADALAT--ANFIVNALPLTPTTHHLFSTELFQQ 216 (324)
T ss_dssp -TTC-------EEEEEESSCC----C---CTTCSEEE-----EGGGCHHHHHH--CSEEEECCCCCGGGTTCBSHHHHHT
T ss_pred -CCC-------EEEEECCCcc----h---hHhHhhcc-----ccCCHHHHHhh--CCEEEEcCCCchHHHHhcCHHHHhc
Confidence 264 6888887521 1 11111111 12468888876 8888743 12246899999888
Q ss_pred HHccCCCCceEEecCCCCCCCCCCHHHHhccccCcEEEe-----cCCCCCcceeCCeeeCccCCcccccchhhhHHHHHh
Q 007703 433 MASFNEVKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVIS 507 (592)
Q Consensus 433 Ma~~~e~rPIIFaLSNPt~~aEct~e~A~~wt~G~aifA-----sGSPF~pV~~~G~~~~p~Q~NN~yiFPGiglG~~~s 507 (592)
|.+ ..++.=.|.-..--|-.-.+|++ +|+.-.| ..-|.++ +. .-=+..|+.+-|=+|-
T Consensus 217 mk~----gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~~----~~--pL~~~~nvilTPHia~----- 279 (324)
T 3evt_A 217 TKQ----QPMLINIGRGPAVDTTALMTALD--HHQLSMAALDVTEPEPLPT----DH--PLWQRDDVLITPHISG----- 279 (324)
T ss_dssp CCS----CCEEEECSCGGGBCHHHHHHHHH--TTSCSEEEESSCSSSSCCT----TC--GGGGCSSEEECCSCTT-----
T ss_pred CCC----CCEEEEcCCChhhhHHHHHHHHH--hCCceEEEeCCCCCCCCCC----CC--hhhcCCCEEEcCcccc-----
Confidence 875 67777777633223333334443 4543221 1112211 00 0123468888887652
Q ss_pred CCcccCHHHHHHHHHHHHcccC
Q 007703 508 GAIRVHDDMLLAASEALAKQVT 529 (592)
Q Consensus 508 ~a~~Itd~m~~aAA~aLA~~v~ 529 (592)
....-.+.|...+++-|...+.
T Consensus 280 ~t~~~~~~~~~~~~~nl~~~l~ 301 (324)
T 3evt_A 280 QIAHFRATVFPIFAANFAQFVK 301 (324)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHh
Confidence 1222345666666777666653
No 141
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=83.78 E-value=0.86 Score=51.04 Aligned_cols=38 Identities=26% Similarity=0.439 Sum_probs=33.6
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.+|++.||+|+|||..|.-||+.|+.+ |+ .+|.++|.+
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~a-----GV------G~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTT-----TC------CEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 467889999999999999999998864 86 799999986
No 142
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=83.75 E-value=1.5 Score=45.18 Aligned_cols=106 Identities=17% Similarity=0.326 Sum_probs=63.7
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCC---CCHHH
Q 007703 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV---NNLLD 405 (592)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~---~~L~e 405 (592)
++..||.|+|||..|.++|.+|+. .|+ + .+.|+|.+-=..++-..+|.+. .+|....... .+. +
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~-----~~~----~--~v~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~t~d~-~ 71 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGL-----KEL----G--DVVLFDIAEGTPQGKGLDIAES-SPVDGFDAKFTGANDY-A 71 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHHH-HHHHTCCCCEEEESSG-G
T ss_pred CcCCEEEEECCCHHHHHHHHHHHh-----CCC----C--eEEEEeCCchhHHHHHHHHhch-hhhcCCCCEEEEeCCH-H
Confidence 456799999999999999988765 365 1 5999998521110000012211 1122111111 344 7
Q ss_pred HhcccCCcEEEeccCC---CCC-----C--C----HHHHHHHHccCCCCceEEecCCCC
Q 007703 406 AVKVIKPTILIGSSGV---GRT-----F--T----KEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 406 ~V~~vkPtvLIG~S~~---~g~-----F--t----~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
+++. .|++|=+.+. +|. | + +++++.|.+++. .-+|+-.|||.
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p-~a~iivvtNPv 127 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAP-EAFVICITNPL 127 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCT-TCEEEECCSSH
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCC-CeEEEecCCCc
Confidence 7876 8888744443 332 2 2 567777888888 99999999997
No 143
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=83.72 E-value=1.3 Score=47.76 Aligned_cols=98 Identities=18% Similarity=0.184 Sum_probs=60.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhc-----cccCCCCCHHHHh
Q 007703 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-----HEHEPVNNLLDAV 407 (592)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA-----~~~~~~~~L~e~V 407 (592)
||.|+|+|..|..+|..|... |. +++++|+.. ++ +......+- .......++.|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~~---~~~l~~~~g~~~~~~~i~~~~~~~e~v 63 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-----GF-------KVAVFNRTY----SK---SEEFMKANASAPFAGNLKAFETMEAFA 63 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH----HH---HHHHHHHTTTSTTGGGEEECSCHHHHH
T ss_pred EEEEEChHHHHHHHHHHHHHC-----CC-------EEEEEeCCH----HH---HHHHHHhcCCCCCCCCeEEECCHHHHH
Confidence 799999999999999988652 63 578888641 11 111111100 0011235788888
Q ss_pred ccc-CCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCC
Q 007703 408 KVI-KPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 408 ~~v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
+.. ++|++| ++...+...+++++.+.+.-+..-||.-+||-.
T Consensus 64 ~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~ 106 (478)
T 1pgj_A 64 ASLKKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAH 106 (478)
T ss_dssp HHBCSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred hcccCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 754 488877 444444456788887765432156888888865
No 144
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=83.69 E-value=7.8 Score=39.73 Aligned_cols=120 Identities=17% Similarity=0.147 Sum_probs=80.3
Q ss_pred CCCceeccCCcc---hHHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHH
Q 007703 298 TTHLVFNDDIQG---TASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (592)
Q Consensus 298 ~~~~~FNDDiQG---TaaV~LAgll~Alr~-------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~ 355 (592)
..+.+.|---.. +|=-+++.+|+..|. .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 90 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~--- 166 (333)
T 1dxy_A 90 YGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKG--- 166 (333)
T ss_dssp TTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHH---
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHH---
Confidence 467777753333 344468888877651 3467999999999999999999998864
Q ss_pred HhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHH
Q 007703 356 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 431 (592)
Q Consensus 356 ~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv~ 431 (592)
.|+ +++.+|+.. .. . .. .++. ..+|.|+++. .|+++=.-- ..++|+++.++
T Consensus 167 --~G~-------~V~~~d~~~----~~-~-~~----~~~~----~~~l~ell~~--aDvV~~~~P~~~~t~~li~~~~l~ 221 (333)
T 1dxy_A 167 --FGA-------KVIAYDPYP----MK-G-DH----PDFD----YVSLEDLFKQ--SDVIDLHVPGIEQNTHIINEAAFN 221 (333)
T ss_dssp --TTC-------EEEEECSSC----CS-S-CC----TTCE----ECCHHHHHHH--CSEEEECCCCCGGGTTSBCHHHHH
T ss_pred --CCC-------EEEEECCCc----ch-h-hH----hccc----cCCHHHHHhc--CCEEEEcCCCchhHHHHhCHHHHh
Confidence 264 588888752 11 1 11 1121 1378888886 888885421 23688999999
Q ss_pred HHHccCCCCceEEecCCC
Q 007703 432 AMASFNEVKPLILALSNP 449 (592)
Q Consensus 432 ~Ma~~~e~rPIIFaLSNP 449 (592)
.|.+ .-++.=.|.-
T Consensus 222 ~mk~----ga~lIn~srg 235 (333)
T 1dxy_A 222 LMKP----GAIVINTARP 235 (333)
T ss_dssp HSCT----TEEEEECSCT
T ss_pred hCCC----CcEEEECCCC
Confidence 8875 6677777653
No 145
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=83.55 E-value=0.65 Score=45.75 Aligned_cols=37 Identities=27% Similarity=0.384 Sum_probs=32.2
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+|++.||+|+|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d 61 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDD 61 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCC
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 46788999999999999999988764 86 789999987
No 146
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=83.07 E-value=5.4 Score=41.05 Aligned_cols=139 Identities=14% Similarity=0.085 Sum_probs=87.4
Q ss_pred CCceeccCC---cchHHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHH
Q 007703 299 THLVFNDDI---QGTASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (592)
Q Consensus 299 ~~~~FNDDi---QGTaaV~LAgll~Alr~-------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (592)
.+.+.|--- ..+|=-+++-+|+..|. .|..|.+.++.|+|.|..|-.+|+.+...
T Consensus 87 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~--- 163 (334)
T 2pi1_A 87 GILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAF--- 163 (334)
T ss_dssp TCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred CeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHHHHC---
Confidence 455555422 23455567888877752 35679999999999999999999988642
Q ss_pred hcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEec----cCCCCCCCHHHHHH
Q 007703 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGS----SGVGRTFTKEVIEA 432 (592)
Q Consensus 357 ~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~----S~~~g~Ft~evv~~ 432 (592)
|+ +++.+|+..- +.. +...-...+|.|+++. .|+++=. ....++|+++.++.
T Consensus 164 --G~-------~V~~~d~~~~----------~~~---~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 219 (334)
T 2pi1_A 164 --GM-------KVLCYDVVKR----------EDL---KEKGCVYTSLDELLKE--SDVISLHVPYTKETHHMINEERISL 219 (334)
T ss_dssp --TC-------EEEEECSSCC----------HHH---HHTTCEECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHH
T ss_pred --cC-------EEEEECCCcc----------hhh---HhcCceecCHHHHHhh--CCEEEEeCCCChHHHHhhCHHHHhh
Confidence 64 6888887421 110 0111112359999986 8888743 23456899999999
Q ss_pred HHccCCCCceEEecCCCCCCCCCCHHHHhccccCcEEE
Q 007703 433 MASFNEVKPLILALSNPTSQSECTAEEAYTWSKGRAIF 470 (592)
Q Consensus 433 Ma~~~e~rPIIFaLSNPt~~aEct~e~A~~wt~G~aif 470 (592)
|.+ .-|+.=.|.-..--|-.-.+|++ +|+.-.
T Consensus 220 mk~----gailIN~aRg~~vd~~aL~~aL~--~g~i~g 251 (334)
T 2pi1_A 220 MKD----GVYLINTARGKVVDTDALYRAYQ--RGKFSG 251 (334)
T ss_dssp SCT----TEEEEECSCGGGBCHHHHHHHHH--TTCEEE
T ss_pred CCC----CcEEEECCCCcccCHHHHHHHHH--hCCceE
Confidence 975 67777777644223333334443 555443
No 147
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=82.84 E-value=12 Score=38.79 Aligned_cols=121 Identities=14% Similarity=0.197 Sum_probs=81.0
Q ss_pred CCCceeccCCc---chHHHHHHHHHHHHHH----------h----------CCCcccceEEEeCcChHHHHHHHHHHHHH
Q 007703 298 TTHLVFNDDIQ---GTASVVLAGVVAALKL----------I----------GGTLAEHRFLFLGAGEAGTGIAELIALEI 354 (592)
Q Consensus 298 ~~~~~FNDDiQ---GTaaV~LAgll~Alr~----------~----------g~~l~d~riv~~GAGsAg~GIA~ll~~~~ 354 (592)
..+.+.|---- .+|=-+++-+|+..|. . |..|.+.++.|+|.|..|..+|+.+...
T Consensus 92 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~- 170 (343)
T 2yq5_A 92 YNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAM- 170 (343)
T ss_dssp --CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT-
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhC-
Confidence 35777776333 3444568888877752 2 3468899999999999999999988642
Q ss_pred HHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHH
Q 007703 355 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVI 430 (592)
Q Consensus 355 ~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv 430 (592)
|+ +++.+|+..- .... ..+ ...+|.|+++. .|+++=.- ...++|+++.+
T Consensus 171 ----G~-------~V~~~d~~~~------~~~~----~~~----~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 223 (343)
T 2yq5_A 171 ----GA-------KVIAYDVAYN------PEFE----PFL----TYTDFDTVLKE--ADIVSLHTPLFPSTENMIGEKQL 223 (343)
T ss_dssp ----TC-------EEEEECSSCC------GGGT----TTC----EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHH
T ss_pred ----CC-------EEEEECCChh------hhhh----ccc----cccCHHHHHhc--CCEEEEcCCCCHHHHHHhhHHHH
Confidence 64 6888887521 0010 111 11389999986 89888542 23478999999
Q ss_pred HHHHccCCCCceEEecCCCC
Q 007703 431 EAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 431 ~~Ma~~~e~rPIIFaLSNPt 450 (592)
+.|.+ ..++.=.|.-.
T Consensus 224 ~~mk~----gailIN~aRg~ 239 (343)
T 2yq5_A 224 KEMKK----SAYLINCARGE 239 (343)
T ss_dssp HHSCT----TCEEEECSCGG
T ss_pred hhCCC----CcEEEECCCCh
Confidence 99975 77787776533
No 148
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=82.76 E-value=2.9 Score=43.34 Aligned_cols=114 Identities=15% Similarity=0.155 Sum_probs=65.5
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc
Q 007703 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (592)
Q Consensus 316 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~ 395 (592)
+|.+++.... +....++.|+|+|..|-.++..+... .+. ++++++|+. .++ ...+...|..
T Consensus 116 ~s~laa~~la--~~~~~~v~iIGaG~~a~~~a~al~~~----~~~------~~V~V~~r~----~~~---a~~la~~~~~ 176 (350)
T 1x7d_A 116 TSLMAAQALA--RPNARKMALIGNGAQSEFQALAFHKH----LGI------EEIVAYDTD----PLA---TAKLIANLKE 176 (350)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSTTHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHTT
T ss_pred HHHHHHHHhc--cccCCeEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHHHh
Confidence 3455555553 24567999999999999888766542 233 678888873 111 2233333321
Q ss_pred c----cCCCCCHHHHhcccCCcEEEeccCCC---CCCCHHHHHHHHccCCCCceEEecCC--CCCCCCCCHH
Q 007703 396 E----HEPVNNLLDAVKVIKPTILIGSSGVG---RTFTKEVIEAMASFNEVKPLILALSN--PTSQSECTAE 458 (592)
Q Consensus 396 ~----~~~~~~L~e~V~~vkPtvLIG~S~~~---g~Ft~evv~~Ma~~~e~rPIIFaLSN--Pt~~aEct~e 458 (592)
. .....++.|+++. .|++|=++..+ .+|..+.+ .+ .-.|+.++. |. +-|+.++
T Consensus 177 ~~g~~~~~~~~~~eav~~--aDiVi~aTps~~~~pvl~~~~l------~~-G~~V~~vgs~~p~-~~El~~~ 238 (350)
T 1x7d_A 177 YSGLTIRRASSVAEAVKG--VDIITTVTADKAYATIITPDML------EP-GMHLNAVGGDCPG-KTELHAD 238 (350)
T ss_dssp CTTCEEEECSSHHHHHTT--CSEEEECCCCSSEEEEECGGGC------CT-TCEEEECSCCBTT-BEEECHH
T ss_pred ccCceEEEeCCHHHHHhc--CCEEEEeccCCCCCceecHHHc------CC-CCEEEECCCCCCC-ceeeCHH
Confidence 0 1123688899985 89998665543 12332222 12 346666664 44 5666553
No 149
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=82.76 E-value=8.9 Score=39.24 Aligned_cols=123 Identities=16% Similarity=0.122 Sum_probs=81.7
Q ss_pred cCCCceeccCCcc---hHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHH
Q 007703 297 GTTHLVFNDDIQG---TASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (592)
Q Consensus 297 r~~~~~FNDDiQG---TaaV~LAgll~Alr~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~ 355 (592)
+..+.+.|----. +|=-+++.+|+..|. .+..|.+.++.|+|.|..|..+|+.+..
T Consensus 91 ~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~--- 167 (333)
T 1j4a_A 91 ELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEG--- 167 (333)
T ss_dssp HTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHH---
T ss_pred hCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHH---
Confidence 3467777753333 344478888888762 2356889999999999999999998864
Q ss_pred HhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHH
Q 007703 356 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 431 (592)
Q Consensus 356 ~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv~ 431 (592)
.|+ +++.+|+.. . . . .+ .++. ...+|.|+++. .|+++=.-. ..++++++.++
T Consensus 168 --~G~-------~V~~~d~~~----~--~-~--~~-~~~~---~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~ 223 (333)
T 1j4a_A 168 --FGA-------KVITYDIFR----N--P-E--LE-KKGY---YVDSLDDLYKQ--ADVISLHVPDVPANVHMINDESIA 223 (333)
T ss_dssp --TTC-------EEEEECSSC----C--H-H--HH-HTTC---BCSCHHHHHHH--CSEEEECSCCCGGGTTCBSHHHHH
T ss_pred --CCC-------EEEEECCCc----c--h-h--HH-hhCe---ecCCHHHHHhh--CCEEEEcCCCcHHHHHHHhHHHHh
Confidence 264 688888742 1 1 0 11 1221 12378898875 888884422 23678888888
Q ss_pred HHHccCCCCceEEecCCCC
Q 007703 432 AMASFNEVKPLILALSNPT 450 (592)
Q Consensus 432 ~Ma~~~e~rPIIFaLSNPt 450 (592)
.|.+ ..++.-.|.-.
T Consensus 224 ~mk~----ga~lIn~arg~ 238 (333)
T 1j4a_A 224 KMKQ----DVVIVNVSRGP 238 (333)
T ss_dssp HSCT----TEEEEECSCGG
T ss_pred hCCC----CcEEEECCCCc
Confidence 8865 67777777643
No 150
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=82.60 E-value=3.3 Score=37.22 Aligned_cols=98 Identities=12% Similarity=0.098 Sum_probs=54.3
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhc
Q 007703 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVK 408 (592)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~ 408 (592)
..+|+|.|| |-.|..+++.|++ .| .++++++++.- +...+......+.. +..+..++.++++
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~-----~g-------~~V~~~~r~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 66 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQ-----AG-------YEVTVLVRDSS----RLPSEGPRPAHVVVGDVLQAADVDKTVA 66 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEESCGG----GSCSSSCCCSEEEESCTTSHHHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHH-----CC-------CeEEEEEeChh----hcccccCCceEEEEecCCCHHHHHHHHc
Confidence 368999998 7777777777654 25 46888877521 10111011111111 2122245777777
Q ss_pred ccCCcEEEeccCCCCC---------CCHHHHHHHHccCCCCceEEecC
Q 007703 409 VIKPTILIGSSGVGRT---------FTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 409 ~vkPtvLIG~S~~~g~---------Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
. +|++|=+.+.... -+..++++|.+..- +.|||.=|
T Consensus 67 ~--~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~v~~Ss 111 (206)
T 1hdo_A 67 G--QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGV-DKVVACTS 111 (206)
T ss_dssp T--CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTC-CEEEEECC
T ss_pred C--CCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCC-CeEEEEee
Confidence 5 8999987775431 14566666665444 55555433
No 151
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=82.54 E-value=6.3 Score=39.92 Aligned_cols=176 Identities=13% Similarity=0.082 Sum_probs=104.7
Q ss_pred hHHHHHHHHHHHHHHh----------------CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEc
Q 007703 310 TASVVLAGVVAALKLI----------------GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373 (592)
Q Consensus 310 TaaV~LAgll~Alr~~----------------g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD 373 (592)
+|=-+++-+|+..|.. ...|.+.+|.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 85 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 152 (290)
T 3gvx_A 85 VAEHAFALLLAHAKNILENNELMKAGIFRQSPTTLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYT 152 (290)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHHhhhhhhhHhhhcccccCCceeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEe
Confidence 4445677777666521 1458899999999999999999988753 64 688888
Q ss_pred cCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHHHHccCCCCceEEecCCC
Q 007703 374 SKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEVKPLILALSNP 449 (592)
Q Consensus 374 ~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNP 449 (592)
+.. .. ... + ....+|.|+++. .|+++=.- ...++++++.++.|.+ ..+|.=.|.-
T Consensus 153 r~~----~~---~~~-----~---~~~~~l~ell~~--aDiV~l~~P~t~~t~~li~~~~l~~mk~----gailIN~aRG 211 (290)
T 3gvx_A 153 RSS----VD---QNV-----D---VISESPADLFRQ--SDFVLIAIPLTDKTRGMVNSRLLANARK----NLTIVNVARA 211 (290)
T ss_dssp SSC----CC---TTC-----S---EECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHHHHTTCCT----TCEEEECSCG
T ss_pred ccc----cc---ccc-----c---cccCChHHHhhc--cCeEEEEeeccccchhhhhHHHHhhhhc----CceEEEeehh
Confidence 752 11 111 1 123578898886 88877332 2346788888888865 7778777753
Q ss_pred CCCCCCCHHHHhccccCcEEEecCCCC--CcceeCCeeeCccCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHcc
Q 007703 450 TSQSECTAEEAYTWSKGRAIFASGSPF--DPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQ 527 (592)
Q Consensus 450 t~~aEct~e~A~~wt~G~aifAsGSPF--~pV~~~G~~~~p~Q~NN~yiFPGiglG~~~s~a~~Itd~m~~aAA~aLA~~ 527 (592)
..--|-.-.+|++ +|+.-.|.=--| +|. ..-=+..|+.+-|=++=| ....-.+.|...+++-|...
T Consensus 212 ~~vd~~aL~~aL~--~g~i~ga~lDV~~~EP~------~pL~~~~nvilTPHiag~----~t~e~~~~~~~~~~~ni~~~ 279 (290)
T 3gvx_A 212 DVVSKPDMIGFLK--ERSDVWYLSDVWWNEPE------ITETNLRNAILSPHVAGG----MSGEIMDIAIQLAFENVRNF 279 (290)
T ss_dssp GGBCHHHHHHHHH--HCTTCEEEESCCTTTTS------CCSCCCSSEEECCSCSSC----BTTBCCHHHHHHHHHHHHHH
T ss_pred cccCCcchhhhhh--hccceEEeeccccCCcc------cchhhhhhhhcCccccCC----ccchHHHHHHHHHHHHHHhh
Confidence 3222222233433 343322211111 111 111245688888876511 23445677888888888777
Q ss_pred cCc
Q 007703 528 VTE 530 (592)
Q Consensus 528 v~~ 530 (592)
..-
T Consensus 280 ~~~ 282 (290)
T 3gvx_A 280 FEG 282 (290)
T ss_dssp TC-
T ss_pred hcC
Confidence 653
No 152
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=82.52 E-value=2.8 Score=42.14 Aligned_cols=110 Identities=14% Similarity=0.186 Sum_probs=63.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhch-----hhccc------cCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-----PWAHE------HEP 399 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~-----~fA~~------~~~ 399 (592)
..||.|+|+|..|..+|..+... |........+++++|+..-.. .+. .....++ .|-.. ...
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~-----g~~~~~~~~~V~~~~r~~~~~-~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~ 80 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN-----AAQLAQFDPRVTMWVFEEDIG-GKK-LTEIINTQHENVKYLPGHKLPPNVVA 80 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----HHHCTTEEEEEEEECCCCBSS-SSB-HHHHHHHHSCCTTTSTTCCCCTTEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-----CCcccCCCCeEEEEEcChhhh-hhH-HHHHHHhcCcccccCCcccCccCeEE
Confidence 36899999999999999998764 310000014688888753211 000 0111110 00000 001
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCCC
Q 007703 400 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPTS 451 (592)
Q Consensus 400 ~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~ 451 (592)
..++.|+++. .|++| ++... ...+++++.++++.....+|..++|-..
T Consensus 81 ~~~~~~~~~~--aD~Vi-lav~~-~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 81 VPDVVQAAED--ADILI-FVVPH-QFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp ESSHHHHHTT--CSEEE-ECCCG-GGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred EcCHHHHHcC--CCEEE-EeCCH-HHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 1468888874 78777 33333 4678999998765432678889999654
No 153
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=82.40 E-value=1.2 Score=45.17 Aligned_cols=96 Identities=19% Similarity=0.386 Sum_probs=61.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc------ccCCC---CCH
Q 007703 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH------EHEPV---NNL 403 (592)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~------~~~~~---~~L 403 (592)
||.|+|||+.|.++|-.++.. |+ +.++|+|.+ .++ +......+.+ ..... .+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~----~~~---~~g~~~dl~~~~~~~~~~~~i~~t~d~ 62 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIART----PGK---PQGEALDLAHAAAELGVDIRISGSNSY 62 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSS----TTH---HHHHHHHHHHHHHHHTCCCCEEEESCG
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCC----hhh---HHHHHHHHHHhhhhcCCCeEEEECCCH
Confidence 689999999999999777642 54 379999985 222 1111111111 01111 345
Q ss_pred HHHhcccCCcEEEeccCCCCC--------------CCHHHHHHHHccCCCCceEEecCCCC
Q 007703 404 LDAVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 404 ~e~V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
++++. .|++|=+.+.+.. .-+++++.|.+++. .-+|+=.|||.
T Consensus 63 -~a~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p-~a~iiv~tNPv 119 (308)
T 2d4a_B 63 -EDMRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAK-DAIVVITTNPV 119 (308)
T ss_dssp -GGGTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCT-TCEEEECCSSH
T ss_pred -HHhCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCC-CeEEEEeCCch
Confidence 67776 8998866554431 13577888888888 87777789998
No 154
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=82.27 E-value=1.5 Score=44.47 Aligned_cols=104 Identities=20% Similarity=0.246 Sum_probs=63.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcccc--CCCCCHHHHhccc
Q 007703 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKVI 410 (592)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~--~~~~~L~e~V~~v 410 (592)
||.|+|||..|.++|.+|+.. |+ -+.+.|+|.+-=..++-.-+|.+...+|-.+. ....+ .++++.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~-----~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~- 69 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCC-
Confidence 799999999999999887653 54 24799999752111100001222111121110 00124 678876
Q ss_pred CCcEEEeccCCC---CC-----C------CHHHHHHHHccCCCCceEEecCCCC
Q 007703 411 KPTILIGSSGVG---RT-----F------TKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 411 kPtvLIG~S~~~---g~-----F------t~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
.|++|=+.+.+ |- | -+++++.|.+++. .-+|+-.|||.
T Consensus 70 -aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p-~a~iivvsNPv 121 (294)
T 1oju_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAP-ESKILVVTNPM 121 (294)
T ss_dssp -CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTST-TCEEEECSSSH
T ss_pred -CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEEeCCcc
Confidence 88877444433 32 1 2567778889999 99999999998
No 155
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=82.16 E-value=2.6 Score=43.47 Aligned_cols=176 Identities=15% Similarity=0.140 Sum_probs=101.7
Q ss_pred hHHHHHHHHHHHHHH----------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEc
Q 007703 310 TASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373 (592)
Q Consensus 310 TaaV~LAgll~Alr~----------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD 373 (592)
+|=-+++.+|+..|. .+..|.+.++.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 170 (324)
T 3hg7_A 103 MSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHF-----GM-------KVLGVS 170 (324)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhC-----CC-------EEEEEc
Confidence 444567777777663 35689999999999999999999988642 64 688888
Q ss_pred cCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEec----cCCCCCCCHHHHHHHHccCCCCceEEecCCC
Q 007703 374 SKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGS----SGVGRTFTKEVIEAMASFNEVKPLILALSNP 449 (592)
Q Consensus 374 ~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~----S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNP 449 (592)
+.. .. ...... .....+|.|+++. .|+++=. ....++|+++.++.|.+ ..++.=.|.-
T Consensus 171 r~~----~~---~~~~~~-----~~~~~~l~ell~~--aDvV~l~lPlt~~T~~li~~~~l~~mk~----gailIN~aRG 232 (324)
T 3hg7_A 171 RSG----RE---RAGFDQ-----VYQLPALNKMLAQ--ADVIVSVLPATRETHHLFTASRFEHCKP----GAILFNVGRG 232 (324)
T ss_dssp SSC----CC---CTTCSE-----EECGGGHHHHHHT--CSEEEECCCCCSSSTTSBCTTTTTCSCT----TCEEEECSCG
T ss_pred CCh----HH---hhhhhc-----ccccCCHHHHHhh--CCEEEEeCCCCHHHHHHhHHHHHhcCCC----CcEEEECCCc
Confidence 764 11 111110 1123578888875 8887743 22246778877777764 6677766653
Q ss_pred CCCCCCCHHHHhccccCcEEEe-----cCCCCCcceeCCeeeCccCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHH
Q 007703 450 TSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEAL 524 (592)
Q Consensus 450 t~~aEct~e~A~~wt~G~aifA-----sGSPF~pV~~~G~~~~p~Q~NN~yiFPGiglG~~~s~a~~Itd~m~~aAA~aL 524 (592)
..--|-.-.+|++ +|+.-.| ..-|.++- . .-=+..|+.+-|=++- .+ ....|...+++-|
T Consensus 233 ~~vde~aL~~aL~--~g~i~ga~lDV~~~EPl~~~----~--pL~~~~nvilTPHia~------~t-~~~~~~~~~~~nl 297 (324)
T 3hg7_A 233 NAINEGDLLTALR--TGKLGMAVLDVFEQEPLPAD----S--PLWGQPNLIITPHNSA------YS-FPDDVAQIFVRNY 297 (324)
T ss_dssp GGBCHHHHHHHHH--TTSSSEEEESCCSSSSCCTT----C--TTTTCTTEEECCSCSS------CC-CHHHHHHHHHHHH
T ss_pred hhhCHHHHHHHHH--cCCceEEEeccCCCCCCCCC----C--hhhcCCCEEEeCCCcc------cc-HHHHHHHHHHHHH
Confidence 3222222233332 3442111 11122110 0 0113457888887652 22 1256777777777
Q ss_pred HcccCc
Q 007703 525 AKQVTE 530 (592)
Q Consensus 525 A~~v~~ 530 (592)
.....-
T Consensus 298 ~~~~~G 303 (324)
T 3hg7_A 298 IRFIDG 303 (324)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 766653
No 156
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=81.86 E-value=0.65 Score=47.24 Aligned_cols=104 Identities=18% Similarity=0.326 Sum_probs=61.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCC-CCCHHHHhccc
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP-VNNLLDAVKVI 410 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~-~~~L~e~V~~v 410 (592)
.||.|+|||+.|..+|-+|+. .++ -..++|+|.+-=-.++...+|.+ ..+|.++..- ..+ .++++.
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~-----~~~-----~~el~L~Di~~~k~~g~a~dl~~-~~~~~~~~~v~~~~-~~a~~~- 67 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALAL-----LGV-----AREVVLVDLDRKLAQAHAEDILH-ATPFAHPVWVWAGS-YGDLEG- 67 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHHT-TGGGSCCCEEEECC-GGGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCChhHHHHHHHHHHH-hHhhcCCeEEEECC-HHHhCC-
Confidence 389999999999998887654 243 25899999852000000001211 1122211000 023 566775
Q ss_pred CCcEEEeccCCC---CC-----------CCHHHHHHHHccCCCCceEEecCCCC
Q 007703 411 KPTILIGSSGVG---RT-----------FTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 411 kPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
.|++|=+.+.+ |. .-+++++.|.+++. .-+|+-.|||.
T Consensus 68 -aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p-~a~iiv~tNPv 119 (310)
T 2xxj_A 68 -ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAP-EAVLLVATNPV 119 (310)
T ss_dssp -EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEECSSSH
T ss_pred -CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCC-CcEEEEecCch
Confidence 88888444443 32 12456777778888 89999999998
No 157
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=81.55 E-value=1.1 Score=46.60 Aligned_cols=38 Identities=24% Similarity=0.482 Sum_probs=33.2
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.+|++.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~a-----Gv------g~i~lvD~D 151 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATS-----GI------GEIILIDND 151 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEEECC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhC-----CC------CeEEEECCC
Confidence 456789999999999999999998875 76 789999986
No 158
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=81.33 E-value=9.4 Score=39.32 Aligned_cols=96 Identities=16% Similarity=0.093 Sum_probs=62.5
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHH
Q 007703 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (592)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e 405 (592)
|..|.+.+|.|+|.|..|..+|+.+... .|+ +++.+|+..- + ....+ .+ ......+|.|
T Consensus 158 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~----~G~-------~V~~~d~~~~----~---~~~~~-~~--g~~~~~~l~e 216 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAIQKEIARKAVHG----LGM-------KLVYYDVAPA----D---AETEK-AL--GAERVDSLEE 216 (348)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEECSSCC----C---HHHHH-HH--TCEECSSHHH
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHh----cCC-------EEEEECCCCc----c---hhhHh-hc--CcEEeCCHHH
Confidence 5679999999999999999999987522 263 6888887421 1 11111 00 0011147888
Q ss_pred HhcccCCcEEEeccC----CCCCCCHHHHHHHHccCCCCceEEecCC
Q 007703 406 AVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEVKPLILALSN 448 (592)
Q Consensus 406 ~V~~vkPtvLIG~S~----~~g~Ft~evv~~Ma~~~e~rPIIFaLSN 448 (592)
+++. .|+++=.-- ..++++++.++.|.+ ..+|.-.|.
T Consensus 217 ll~~--aDvVil~vp~~~~t~~li~~~~l~~mk~----gailin~sr 257 (348)
T 2w2k_A 217 LARR--SDCVSVSVPYMKLTHHLIDEAFFAAMKP----GSRIVNTAR 257 (348)
T ss_dssp HHHH--CSEEEECCCCSGGGTTCBCHHHHHHSCT----TEEEEECSC
T ss_pred Hhcc--CCEEEEeCCCChHHHHHhhHHHHhcCCC----CCEEEECCC
Confidence 8876 888874421 236888888888864 667766665
No 159
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=81.32 E-value=3.1 Score=45.28 Aligned_cols=99 Identities=14% Similarity=0.190 Sum_probs=62.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcccc--CCCCCHHHHhcc
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKV 409 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~--~~~~~L~e~V~~ 409 (592)
.+|.|+|.|..|..+|..|... |. +++++|+. . +.+......-+... ....++.|+++.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~----~---~~~~~l~~~g~~g~~i~~~~s~~e~v~~ 65 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRT----V---SKVDDFLANEAKGTKVVGAQSLKEMVSK 65 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----T---HHHHHHHHTTTTTSSCEECSSHHHHHHT
T ss_pred CEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCC----H---HHHHHHHhcccCCCceeccCCHHHHHhh
Confidence 5799999999999999988753 63 67888864 1 11222111111110 113688898875
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCC
Q 007703 410 I-KPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 410 v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
+ +||++| ++-+.+.-++++++.+.++-+...||+-.||-.
T Consensus 66 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 66 LKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp BCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 4 588776 444444457788888876543277888888854
No 160
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=81.31 E-value=1.4 Score=47.46 Aligned_cols=98 Identities=14% Similarity=0.133 Sum_probs=63.0
Q ss_pred HHHHHHHHHHhcCCCeeeeeecCCCchHHHHHHHHc-CCCcee--ccCCcchHHHHHHHHHHHHHHhCC--------Ccc
Q 007703 262 LDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYG-TTHLVF--NDDIQGTASVVLAGVVAALKLIGG--------TLA 330 (592)
Q Consensus 262 idefv~av~~~fGp~~lIqfEDf~~~~Af~lL~ryr-~~~~~F--NDDiQGTaaV~LAgll~Alr~~g~--------~l~ 330 (592)
+..+++.+...+ |+ |.|+-+....-.++-++|. ..+|++ |+..-+.+.....-++..+..... .-.
T Consensus 135 ~~~~l~~~a~~~-~~--v~~~~vd~~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~~ 211 (521)
T 1hyu_A 135 VVQALNLMAVLN-PR--IKHTAIDGGTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKRD 211 (521)
T ss_dssp HHHHHHHHHHHC-TT--EEEEEEETTTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTSC
T ss_pred HHHHHHHHHhHc-Cc--eEEEEEechhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhcccccccccccccC
Confidence 566666666677 54 4454333345566788886 466644 666667776666666665433210 123
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (592)
..+|+|+|||.||+..|..+.+ .|+ ++.++|.
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~-----~G~-------~v~lie~ 243 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSAR-----KGI-------RTGLMGE 243 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECS
T ss_pred cccEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEEC
Confidence 4679999999999999988764 363 5677765
No 161
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=81.17 E-value=5.8 Score=42.01 Aligned_cols=165 Identities=12% Similarity=0.033 Sum_probs=89.7
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHH
Q 007703 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (592)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e 405 (592)
+..|.+.++.|+|.|..|..+|+.+.. .|+ +++.+|+... . ....+ .+ ......+|.|
T Consensus 186 ~~~l~gktvGIIGlG~IG~~vA~~l~a-----~G~-------~V~~~d~~~~----~---~~~~~-~~--G~~~~~~l~e 243 (393)
T 2nac_A 186 AYDLEAMHVGTVAAGRIGLAVLRRLAP-----FDV-------HLHYTDRHRL----P---ESVEK-EL--NLTWHATRED 243 (393)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSCC----C---HHHHH-HH--TCEECSSHHH
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHh-----CCC-------EEEEEcCCcc----c---hhhHh-hc--CceecCCHHH
Confidence 567999999999999999999998753 253 5787876411 0 11011 11 0011247888
Q ss_pred HhcccCCcEEEecc----CCCCCCCHHHHHHHHccCCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCC--cc
Q 007703 406 AVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEVKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFD--PF 479 (592)
Q Consensus 406 ~V~~vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~~aEct~e~A~~wt~G~aifAsGSPF~--pV 479 (592)
+++. .|+++=.- ...++|+++.++.|.+ .-+|.=.|.-.---|-.-.+|++ +|+.--|.--=|. |.
T Consensus 244 ll~~--aDvV~l~~Plt~~t~~li~~~~l~~mk~----gailIN~aRG~~vde~aL~~aL~--~g~i~gA~lDV~~~EP~ 315 (393)
T 2nac_A 244 MYPV--CDVVTLNCPLHPETEHMINDETLKLFKR----GAYIVNTARGKLCDRDAVARALE--SGRLAGYAGDVWFPQPA 315 (393)
T ss_dssp HGGG--CSEEEECSCCCTTTTTCBSHHHHTTSCT----TEEEEECSCGGGBCHHHHHHHHH--TTSEEEEEESCCSSSSC
T ss_pred HHhc--CCEEEEecCCchHHHHHhhHHHHhhCCC----CCEEEECCCchHhhHHHHHHHHH--cCCeeEEEEEecCCCCC
Confidence 8875 88887442 2346888888888864 67777777532112222233333 4654332211111 11
Q ss_pred eeCCeeeCccCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHccc
Q 007703 480 EYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQV 528 (592)
Q Consensus 480 ~~~G~~~~p~Q~NN~yiFPGiglG~~~s~a~~Itd~m~~aAA~aLA~~v 528 (592)
. .... -=+..|+.+-|=++-...-+ ...|...+++-|....
T Consensus 316 ~-~~~p--L~~~~nvilTPHia~~T~e~-----~~~~~~~~~~nl~~~~ 356 (393)
T 2nac_A 316 P-KDHP--WRTMPYNGMTPHISGTTLTA-----QARYAAGTREILECFF 356 (393)
T ss_dssp C-TTCG--GGTSTTBCCCCSCTTCSHHH-----HHHHHHHHHHHHHHHH
T ss_pred C-CCCh--hHcCCCEEECCCCCcCcHHH-----HHHHHHHHHHHHHHHH
Confidence 0 0110 11356888888776422211 2234444555555544
No 162
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=81.01 E-value=2.1 Score=45.52 Aligned_cols=97 Identities=18% Similarity=0.290 Sum_probs=52.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChh-hhcCcEEEEccCC-------cccCCCcc--CCchhchhhccccCCCC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVE-ETRKKICLVDSKG-------LIVSSRKD--SLQHFKKPWAHEHEPVN 401 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~e-eA~~~i~lvD~~G-------Lv~~~R~~--~l~~~k~~fA~~~~~~~ 401 (592)
.||.|+|||+=|+.+|..+.+.-.. ...- +-.=++|..|..= .|...|.+ .|+..+.| ..-.-..
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~---~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp--~~i~~t~ 109 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKG---YPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLP--DNLVANP 109 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH---CTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCC--SSEEEES
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCC---ccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCC--CCcEEeC
Confidence 3999999999999999999875211 1000 0012467655430 12222211 12222211 0001125
Q ss_pred CHHHHhcccCCcEEE-eccCCCCCCCHHHHHHHHccCC
Q 007703 402 NLLDAVKVIKPTILI-GSSGVGRTFTKEVIEAMASFNE 438 (592)
Q Consensus 402 ~L~e~V~~vkPtvLI-G~S~~~g~Ft~evv~~Ma~~~e 438 (592)
+|.|+++. .|++| .+.+ .|-+++++.+..+-.
T Consensus 110 dl~~al~~--ad~ii~avPs---~~~r~~l~~l~~~~~ 142 (391)
T 4fgw_A 110 DLIDSVKD--VDIIVFNIPH---QFLPRICSQLKGHVD 142 (391)
T ss_dssp CHHHHHTT--CSEEEECSCG---GGHHHHHHHHTTTSC
T ss_pred CHHHHHhc--CCEEEEECCh---hhhHHHHHHhccccC
Confidence 78888876 66654 3333 567888888876543
No 163
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=80.93 E-value=3.5 Score=44.18 Aligned_cols=100 Identities=12% Similarity=0.164 Sum_probs=62.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~ 409 (592)
..||.|+|+|..|..+|..|... |. +++++|+. . +.+...+..+.. ......++.|+++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~-----G~-------~V~v~dr~----~---~~~~~l~~~~~~~gi~~~~s~~e~v~~ 65 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR-----GY-------TVAIYNRT----T---SKTEEVFKEHQDKNLVFTKTLEEFVGS 65 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----H---HHHHHHHHHTTTSCEEECSSHHHHHHT
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC-----CC-------EEEEEcCC----H---HHHHHHHHhCcCCCeEEeCCHHHHHhh
Confidence 35899999999999999988652 63 57778763 1 112222211100 01123578888875
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCC
Q 007703 410 I-KPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 410 v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
. +||++| ++...+...+++++.+.+..+...||.-+||-.
T Consensus 66 l~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~ 106 (474)
T 2iz1_A 66 LEKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTH 106 (474)
T ss_dssp BCSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 3 588877 444444457788887776543156888888864
No 164
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=80.81 E-value=6.3 Score=40.65 Aligned_cols=119 Identities=13% Similarity=0.058 Sum_probs=78.2
Q ss_pred CCceeccCC---cchHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHh
Q 007703 299 THLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 357 (592)
Q Consensus 299 ~~~~FNDDi---QGTaaV~LAgll~Alr~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~ 357 (592)
.+++.|--- +.+|=-+++-+|+..|. .|..|.+.+|.|+|.|..|..+|+.+..
T Consensus 112 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~----- 186 (335)
T 2g76_A 112 GILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQS----- 186 (335)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHT-----
T ss_pred CeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHH-----
Confidence 566666432 23444568888887764 2567999999999999999999998753
Q ss_pred cCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccc-cCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHH
Q 007703 358 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 432 (592)
Q Consensus 358 ~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~-~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~ 432 (592)
.|+ +++.+|+.. . +. .+.. .-...+|.|+++. .|+++=.- ...++|+++.++.
T Consensus 187 ~G~-------~V~~~d~~~----~------~~---~~~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 244 (335)
T 2g76_A 187 FGM-------KTIGYDPII----S------PE---VSASFGVQQLPLEEIWPL--CDFITVHTPLLPSTTGLLNDNTFAQ 244 (335)
T ss_dssp TTC-------EEEEECSSS----C------HH---HHHHTTCEECCHHHHGGG--CSEEEECCCCCTTTTTSBCHHHHTT
T ss_pred CCC-------EEEEECCCc----c------hh---hhhhcCceeCCHHHHHhc--CCEEEEecCCCHHHHHhhCHHHHhh
Confidence 253 588888641 1 10 1111 1112478898886 88888442 2235788888888
Q ss_pred HHccCCCCceEEecCC
Q 007703 433 MASFNEVKPLILALSN 448 (592)
Q Consensus 433 Ma~~~e~rPIIFaLSN 448 (592)
|.+ ..++.=.|.
T Consensus 245 mk~----gailIN~ar 256 (335)
T 2g76_A 245 CKK----GVRVVNCAR 256 (335)
T ss_dssp SCT----TEEEEECSC
T ss_pred CCC----CcEEEECCC
Confidence 764 677777776
No 165
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=80.55 E-value=3.1 Score=44.67 Aligned_cols=99 Identities=14% Similarity=0.178 Sum_probs=60.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhch-hhc-cccCCCCCHHHHhcc
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA-HEHEPVNNLLDAVKV 409 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~-~fA-~~~~~~~~L~e~V~~ 409 (592)
.||.|+|+|..|..+|..|.. .|. +++++|+.. + .+...++ ... .......++.|+++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~-----~G~-------~V~v~dr~~----~---~~~~l~~~~~~g~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMND-----HGF-------VVCAFNRTV----S---KVDDFLANEAKGTKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSST----H---HHHHHHHTTTTTSSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHH-----CCC-------eEEEEeCCH----H---HHHHHHhccccCCCeEEeCCHHHHHhh
Confidence 479999999999999998865 263 578887631 1 1111111 000 001113578888863
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCC
Q 007703 410 I-KPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 410 v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
+ +||++| ++...+...+++++.+.++.+..-||+-+||-.
T Consensus 64 l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~ 104 (482)
T 2pgd_A 64 LKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSE 104 (482)
T ss_dssp BCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 2 588877 444444457788887765443156888888865
No 166
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=80.43 E-value=3 Score=42.00 Aligned_cols=100 Identities=10% Similarity=0.155 Sum_probs=60.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 410 (592)
..||.|+|+|..|..+|..|... |.. ...+++++|+. .++ +.+...++ + ...-..+..|+++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~-----G~~---~~~~V~v~~r~----~~~-~~~~~l~~-~--G~~~~~~~~e~~~~- 84 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAA-----GVL---AAHKIMASSPD----MDL-ATVSALRK-M--GVKLTPHNKETVQH- 84 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----TTS-HHHHHHHH-H--TCEEESCHHHHHHH-
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-----CCC---CcceEEEECCC----ccH-HHHHHHHH-c--CCEEeCChHHHhcc-
Confidence 45899999999999999988653 531 12468888864 110 01111110 0 00111467777775
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcc-CCCCceEEecCCCCC
Q 007703 411 KPTILIGSSGVGRTFTKEVIEAMASF-NEVKPLILALSNPTS 451 (592)
Q Consensus 411 kPtvLIG~S~~~g~Ft~evv~~Ma~~-~e~rPIIFaLSNPt~ 451 (592)
.|++| ++..+ -..+++++.+... .+ ..+|.-+||..+
T Consensus 85 -aDvVi-lav~~-~~~~~vl~~l~~~l~~-~~ivvs~s~gi~ 122 (322)
T 2izz_A 85 -SDVLF-LAVKP-HIIPFILDEIGADIED-RHIVVSCAAGVT 122 (322)
T ss_dssp -CSEEE-ECSCG-GGHHHHHHHHGGGCCT-TCEEEECCTTCC
T ss_pred -CCEEE-EEeCH-HHHHHHHHHHHhhcCC-CCEEEEeCCCCC
Confidence 77766 33333 4577888877754 34 568888888774
No 167
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=80.20 E-value=6.4 Score=40.07 Aligned_cols=122 Identities=15% Similarity=0.178 Sum_probs=76.1
Q ss_pred CCCceeccCC---cchHHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcChHHHHHHHHHHHH
Q 007703 298 TTHLVFNDDI---QGTASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 353 (592)
Q Consensus 298 ~~~~~FNDDi---QGTaaV~LAgll~Alr~---------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~ 353 (592)
..+.+.|--- +.+|=-+++-+|+..|. .|..|.+.+|.|+|.|..|-.+|+.+..
T Consensus 89 ~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~- 167 (320)
T 1gdh_A 89 RGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQG- 167 (320)
T ss_dssp TTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHT-
T ss_pred CCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHH-
Confidence 3455555432 23444467888877663 2346889999999999999999998753
Q ss_pred HHHhcCCChhhhcCcEEEEcc-CCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHH
Q 007703 354 ISKQTKAPVEETRKKICLVDS-KGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKE 428 (592)
Q Consensus 354 ~~~~~G~s~eeA~~~i~lvD~-~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~e 428 (592)
.| -+++.+|+ .. +. ...+ .+ ......+|.|+++. .|+++=.-- ..++++++
T Consensus 168 ----~G-------~~V~~~d~~~~-------~~-~~~~-~~--g~~~~~~l~ell~~--aDvVil~~p~~~~t~~~i~~~ 223 (320)
T 1gdh_A 168 ----FD-------MDIDYFDTHRA-------SS-SDEA-SY--QATFHDSLDSLLSV--SQFFSLNAPSTPETRYFFNKA 223 (320)
T ss_dssp ----TT-------CEEEEECSSCC-------CH-HHHH-HH--TCEECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHH
T ss_pred ----CC-------CEEEEECCCCc-------Ch-hhhh-hc--CcEEcCCHHHHHhh--CCEEEEeccCchHHHhhcCHH
Confidence 25 36888887 41 10 0011 00 00112378888875 888774321 23578888
Q ss_pred HHHHHHccCCCCceEEecCC
Q 007703 429 VIEAMASFNEVKPLILALSN 448 (592)
Q Consensus 429 vv~~Ma~~~e~rPIIFaLSN 448 (592)
.++.|.+ .-+|.-.|.
T Consensus 224 ~l~~mk~----gailIn~ar 239 (320)
T 1gdh_A 224 TIKSLPQ----GAIVVNTAR 239 (320)
T ss_dssp HHTTSCT----TEEEEECSC
T ss_pred HHhhCCC----CcEEEECCC
Confidence 8877764 667777775
No 168
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=80.02 E-value=1.1 Score=46.04 Aligned_cols=104 Identities=20% Similarity=0.290 Sum_probs=62.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCC--CCHHHHhccc
Q 007703 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVI 410 (592)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~--~~L~e~V~~v 410 (592)
||.|+|||..|.++|..++.. |+ -+.+.++|.+-=..++-.-+|.+. ..+....... .+..++++.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~~v~~~~~~~a~~~- 69 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DV-----AKEVVMVDIKDGMPQGKALDMRES-SPIHGFDTRVTGTNDYGPTED- 69 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----SSEEEEECSSTTHHHHHHHHHHHH-HHHHTCCCEEEEESSSGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCchHHHHHHHHHHhcc-ccccCCCcEEEECCCHHHhCC-
Confidence 799999999999999988763 54 258999998531111000012211 1121100011 134577776
Q ss_pred CCcEEEeccCCC---CC-----------CCHHHHHHHHccCCCCceEEecCCCC
Q 007703 411 KPTILIGSSGVG---RT-----------FTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 411 kPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
.|++|=+.+.+ |- .-+++++.+.+++. ..+|+-.|||.
T Consensus 70 -aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p-~a~vivvtNPv 121 (314)
T 3nep_X 70 -SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSP-DSTIIVVANPL 121 (314)
T ss_dssp -CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCT-TCEEEECCSSH
T ss_pred -CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCC-CcEEEecCCch
Confidence 88877444333 31 12566778888999 99999999998
No 169
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=80.00 E-value=2.6 Score=43.18 Aligned_cols=191 Identities=13% Similarity=0.086 Sum_probs=108.8
Q ss_pred CCCceeccCC----cchHHHHHHHHHHHHHH----------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHh
Q 007703 298 TTHLVFNDDI----QGTASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 357 (592)
Q Consensus 298 ~~~~~FNDDi----QGTaaV~LAgll~Alr~----------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~ 357 (592)
..+++.|--- +..|=-+++.+|+..|. .+..|.+.++.|+|.|..|..+|+.+..
T Consensus 86 ~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~----- 160 (315)
T 3pp8_A 86 ASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQA----- 160 (315)
T ss_dssp TTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHT-----
T ss_pred CCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHH-----
Confidence 4566665321 34555678888888764 2567899999999999999999998854
Q ss_pred cCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEec----cCCCCCCCHHHHHHH
Q 007703 358 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGS----SGVGRTFTKEVIEAM 433 (592)
Q Consensus 358 ~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~----S~~~g~Ft~evv~~M 433 (592)
.|+ +++.+|+..- ...... .+. ...+|.|+++. .|+++=. ....++|+++.++.|
T Consensus 161 ~G~-------~V~~~dr~~~-------~~~~~~-~~~----~~~~l~ell~~--aDiV~l~~Plt~~t~~li~~~~l~~m 219 (315)
T 3pp8_A 161 WGF-------PLRCWSRSRK-------SWPGVE-SYV----GREELRAFLNQ--TRVLINLLPNTAQTVGIINSELLDQL 219 (315)
T ss_dssp TTC-------CEEEEESSCC-------CCTTCE-EEE----SHHHHHHHHHT--CSEEEECCCCCGGGTTCBSHHHHTTS
T ss_pred CCC-------EEEEEcCCch-------hhhhhh-hhc----ccCCHHHHHhh--CCEEEEecCCchhhhhhccHHHHhhC
Confidence 264 6778886421 111111 110 11468888875 7888733 123468888888888
Q ss_pred HccCCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCccee-CCeeeCccCCcccccchhhhHHHHHhCCccc
Q 007703 434 ASFNEVKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRV 512 (592)
Q Consensus 434 a~~~e~rPIIFaLSNPt~~aEct~e~A~~wt~G~aifAsGSPF~pV~~-~G~~~~p~Q~NN~yiFPGiglG~~~s~a~~I 512 (592)
.+ ..++.=.|.-..--|-.-.+|++ .|+.-.|.=-=|++--. .+. .-=+..|+.+-|=++- .+.
T Consensus 220 k~----gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~~~~--pL~~~~nvilTPHia~------~t~- 284 (315)
T 3pp8_A 220 PD----GAYVLNLARGVHVQEADLLAALD--SGKLKGAMLDVFSQEPLPQES--PLWRHPRVAMTPHIAA------VTR- 284 (315)
T ss_dssp CT----TEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSSCCTTC--GGGGCTTEEECSSCSS------CCC-
T ss_pred CC----CCEEEECCCChhhhHHHHHHHHH--hCCccEEEcCCCCCCCCCCCC--hhhcCCCEEECCCCCc------ccH-
Confidence 65 67777776643223333334443 45543332111111000 000 0114467888887652 222
Q ss_pred CHHHHHHHHHHHHcccC
Q 007703 513 HDDMLLAASEALAKQVT 529 (592)
Q Consensus 513 td~m~~aAA~aLA~~v~ 529 (592)
...|...+++-|.....
T Consensus 285 ~~~~~~~~~~ni~~~~~ 301 (315)
T 3pp8_A 285 PAEAIDYISRTITQLEK 301 (315)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 25676667777766654
No 170
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=79.76 E-value=1.3 Score=45.41 Aligned_cols=107 Identities=17% Similarity=0.270 Sum_probs=65.5
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC--cccCCCccCCchhchhhccccCCC--CCHH
Q 007703 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG--LIVSSRKDSLQHFKKPWAHEHEPV--NNLL 404 (592)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G--Lv~~~R~~~l~~~k~~fA~~~~~~--~~L~ 404 (592)
.+..||.|+|||..|.++|..++. .|+ ..+.++|.+- -..++...+|.+ ..++....... .+-.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~-----~g~------~~v~l~D~~~~~~~~~g~a~dl~~-~~~~~~~~~~i~~t~d~ 73 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQ-----KEL------ADVVLVDIPQLENPTKGKALDMLE-ASPVQGFDANIIGTSDY 73 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECCGGGHHHHHHHHHHHHH-HHHHHTCCCCEEEESCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEeccchHHHHHHhhhhHHH-hhhhccCCCEEEEcCCH
Confidence 345799999999999999998875 254 3789999861 011111001221 12333211111 1113
Q ss_pred HHhcccCCcEEEeccCCC---CC-----C------CHHHHHHHHccCCCCceEEecCCCC
Q 007703 405 DAVKVIKPTILIGSSGVG---RT-----F------TKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 405 e~V~~vkPtvLIG~S~~~---g~-----F------t~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
++++. .|++|=+.+.+ |- | -+++++.+++++. .-+|+-.|||.
T Consensus 74 ~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p-~a~vlvvsNPv 130 (315)
T 3tl2_A 74 ADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSP-NAIIVVLTNPV 130 (315)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEECCSSH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEECCChH
Confidence 66765 88887444433 31 2 2577788888898 99999999998
No 171
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=79.60 E-value=1.5 Score=43.15 Aligned_cols=32 Identities=19% Similarity=0.300 Sum_probs=26.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.||.|+|+|..|.++|..+... |. +++++|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 5899999999999999988753 53 68888764
No 172
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=79.48 E-value=1.6 Score=45.14 Aligned_cols=37 Identities=27% Similarity=0.439 Sum_probs=32.9
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.|++.||+|+|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 33 ~L~~~~VlivG~GGlG~~ia~~La~~-----Gv------g~itlvD~d 69 (346)
T 1y8q_A 33 RLRASRVLLVGLKGLGAEIAKNLILA-----GV------KGLTMLDHE 69 (346)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEECC
Confidence 56788999999999999999999875 86 799999976
No 173
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=79.41 E-value=1.2 Score=45.60 Aligned_cols=106 Identities=19% Similarity=0.279 Sum_probs=63.2
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCC--CCHHHHh
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAV 407 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~--~~L~e~V 407 (592)
+..||.|+|||..|.++|..|+. .|+ + .+.++|.+-=..++-..+|.+.. ++....... .+-.+++
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~-----~~~----~--~v~l~Di~~~~~~g~a~dL~~~~-~~~~~~~~v~~t~d~~a~ 71 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALI-----KQL----G--DVVLFDIAQGMPNGKALDLLQTC-PIEGVDFKVRGTNDYKDL 71 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHTTH-HHHTCCCCEEEESCGGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHh-----CCC----c--eEEEEeCChHHHHHHHHHHHhhh-hhcCCCcEEEEcCCHHHH
Confidence 35799999999999999988765 365 2 69999985210000000122111 111111111 1224677
Q ss_pred cccCCcEEEeccCCC---CC-----C------CHHHHHHHHccCCCCceEEecCCCC
Q 007703 408 KVIKPTILIGSSGVG---RT-----F------TKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 408 ~~vkPtvLIG~S~~~---g~-----F------t~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
+. .|++|=+.+.+ |. | -+++++.+.+++. .-+|+-.|||.
T Consensus 72 ~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p-~a~vivvtNPv 125 (321)
T 3p7m_A 72 EN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCP-NAFVICITNPL 125 (321)
T ss_dssp TT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEECCSSH
T ss_pred CC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCC-CcEEEEecCch
Confidence 76 88887554433 32 1 2567777888888 88999999997
No 174
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=79.30 E-value=2.3 Score=44.57 Aligned_cols=86 Identities=20% Similarity=0.320 Sum_probs=49.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc-----------ccCCC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-----------EHEPV 400 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-----------~~~~~ 400 (592)
.||+|+|||-.|..+++.|++ .|- .-.++.++|++ .++ +......+.. +....
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~-----~g~----~~~~V~v~~r~----~~~---~~~la~~l~~~~~~~~~~~~~D~~d~ 65 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAM-----NRE----VFSHITLASRT----LSK---CQEIAQSIKAKGYGEIDITTVDADSI 65 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----CTT----TCCEEEEEESC----HHH---HHHHHHHHHHTTCCCCEEEECCTTCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC----CceEEEEEECC----HHH---HHHHHHHhhhhcCCceEEEEecCCCH
Confidence 389999998666666665543 231 00368888874 111 2222222211 11122
Q ss_pred CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHc
Q 007703 401 NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMAS 435 (592)
Q Consensus 401 ~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~ 435 (592)
.++.++++..++|++|=+++. .+..+++++..+
T Consensus 66 ~~l~~~l~~~~~DvVin~ag~--~~~~~v~~a~l~ 98 (405)
T 4ina_A 66 EELVALINEVKPQIVLNIALP--YQDLTIMEACLR 98 (405)
T ss_dssp HHHHHHHHHHCCSEEEECSCG--GGHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCEEEECCCc--ccChHHHHHHHH
Confidence 468888988899999977653 235667766544
No 175
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=79.12 E-value=4.1 Score=41.24 Aligned_cols=93 Identities=16% Similarity=0.156 Sum_probs=55.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHH-Hhccc
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD-AVKVI 410 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e-~V~~v 410 (592)
.||.|+|+|..|..+|..+... |. ..+++++|++- +.+...+..-+. .....++.| +++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-----G~-----~~~V~~~dr~~-------~~~~~a~~~G~~-~~~~~~~~~~~~~~- 94 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-----GF-----KGKIYGYDINP-------ESISKAVDLGII-DEGTTSIAKVEDFS- 94 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCH-------HHHHHHHHTTSC-SEEESCTTGGGGGC-
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-----CC-----CCEEEEEECCH-------HHHHHHHHCCCc-chhcCCHHHHhhcc-
Confidence 7999999999999999988653 64 14788888741 111111100000 001245666 6764
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHccC-CCCceEEecC
Q 007703 411 KPTILIGSSGVGRTFTKEVIEAMASFN-EVKPLILALS 447 (592)
Q Consensus 411 kPtvLIG~S~~~g~Ft~evv~~Ma~~~-e~rPIIFaLS 447 (592)
+|++| ++.... -.+++++.+.+.. + .-||.-.+
T Consensus 95 -aDvVi-lavp~~-~~~~vl~~l~~~l~~-~~iv~d~~ 128 (314)
T 3ggo_A 95 -PDFVM-LSSPVR-TFREIAKKLSYILSE-DATVTDQG 128 (314)
T ss_dssp -CSEEE-ECSCGG-GHHHHHHHHHHHSCT-TCEEEECC
T ss_pred -CCEEE-EeCCHH-HHHHHHHHHhhccCC-CcEEEECC
Confidence 78777 444443 3577777776643 4 55665554
No 176
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=78.95 E-value=2.3 Score=41.78 Aligned_cols=32 Identities=19% Similarity=0.402 Sum_probs=25.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.||.|+|+|..|..+|..+... | .+++++|++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----G-------CSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 4899999999999999988653 5 367777774
No 177
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=78.89 E-value=2.2 Score=43.33 Aligned_cols=35 Identities=20% Similarity=0.479 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
..||||+|+|.||+..|..|.+. |- .-+|.++|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~-----~~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DP-----SIEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----Cc-----CCeEEEEeCC
Confidence 56999999999999999988653 32 1368888865
No 178
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=78.65 E-value=3.3 Score=40.57 Aligned_cols=91 Identities=13% Similarity=0.203 Sum_probs=57.2
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 007703 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (592)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 410 (592)
.||.|+|+ |..|..+|..+.. .| .+++++|++- +.+...+. ..-...++.++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-----~g-------~~V~~~~r~~-------~~~~~~~~----~g~~~~~~~~~~~~- 67 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-----SA-------HHLAAIEIAP-------EGRDRLQG----MGIPLTDGDGWIDE- 67 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----SS-------SEEEEECCSH-------HHHHHHHH----TTCCCCCSSGGGGT-
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CC-------CEEEEEECCH-------HHHHHHHh----cCCCcCCHHHHhcC-
Confidence 48999999 9999999998864 25 3688887631 11111111 11111356677764
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcc-CCCCceEEecCCCC
Q 007703 411 KPTILIGSSGVGRTFTKEVIEAMASF-NEVKPLILALSNPT 450 (592)
Q Consensus 411 kPtvLIG~S~~~g~Ft~evv~~Ma~~-~e~rPIIFaLSNPt 450 (592)
.|++|= +..+.. .+++++.+.+. .+ ..+|.-+|+..
T Consensus 68 -aDvVi~-av~~~~-~~~v~~~l~~~l~~-~~ivv~~s~~~ 104 (286)
T 3c24_A 68 -ADVVVL-ALPDNI-IEKVAEDIVPRVRP-GTIVLILDAAA 104 (286)
T ss_dssp -CSEEEE-CSCHHH-HHHHHHHHGGGSCT-TCEEEESCSHH
T ss_pred -CCEEEE-cCCchH-HHHHHHHHHHhCCC-CCEEEECCCCc
Confidence 888883 333333 68888888764 34 56777788854
No 179
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=78.64 E-value=1.8 Score=43.30 Aligned_cols=35 Identities=17% Similarity=0.187 Sum_probs=27.9
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.+-.||.|+|+|..|..+|..|... |. +++++|++
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 53 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRT 53 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred ccCCEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 3447999999999999999988753 53 67888874
No 180
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=78.55 E-value=7.1 Score=40.58 Aligned_cols=161 Identities=14% Similarity=0.125 Sum_probs=96.6
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHH
Q 007703 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (592)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e 405 (592)
|..|.+.++.|+|.|..|..+|+.+.. .|+ +++.+|+.. .. + .... .......+|.|
T Consensus 155 ~~~l~g~tvGIIGlG~IG~~vA~~l~~-----~G~-------~V~~~d~~~----~~-~---~~~~---~g~~~~~~l~e 211 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKIGQLVAGYGRA-----FGM-------NVLVWGREN----SK-E---RARA---DGFAVAESKDA 211 (352)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSHH----HH-H---HHHH---TTCEECSSHHH
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHh-----CCC-------EEEEECCCC----CH-H---HHHh---cCceEeCCHHH
Confidence 567899999999999999999998854 264 688888641 00 0 0000 00112258999
Q ss_pred HhcccCCcEEEec----cCCCCCCCHHHHHHHHccCCCCceEEecCCCCCCCCCCHHHHhccccCcEE------EecCCC
Q 007703 406 AVKVIKPTILIGS----SGVGRTFTKEVIEAMASFNEVKPLILALSNPTSQSECTAEEAYTWSKGRAI------FASGSP 475 (592)
Q Consensus 406 ~V~~vkPtvLIG~----S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~~aEct~e~A~~wt~G~ai------fAsGSP 475 (592)
+++. .|+++=. ....++|+++.++.|.+ ..++.=.|.-..--|-.-.+|++ +|+.- |.. -|
T Consensus 212 ll~~--aDiV~l~~Plt~~t~~li~~~~l~~mk~----gailIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDV~~~-EP 282 (352)
T 3gg9_A 212 LFEQ--SDVLSVHLRLNDETRSIITVADLTRMKP----TALFVNTSRAELVEENGMVTALN--RGRPGMAAIDVFET-EP 282 (352)
T ss_dssp HHHH--CSEEEECCCCSTTTTTCBCHHHHTTSCT----TCEEEECSCGGGBCTTHHHHHHH--HTSSSEEEECCCSS-SC
T ss_pred HHhh--CCEEEEeccCcHHHHHhhCHHHHhhCCC----CcEEEECCCchhhcHHHHHHHHH--hCCccEEEecccCC-CC
Confidence 9987 8888743 22346899999988875 77888888744334555555654 45432 222 13
Q ss_pred CCcceeCCeeeCccCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHcccC
Q 007703 476 FDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVT 529 (592)
Q Consensus 476 F~pV~~~G~~~~p~Q~NN~yiFPGiglG~~~s~a~~Itd~m~~aAA~aLA~~v~ 529 (592)
.++ .. .-=+..|+.+-|=+|-.. ..-.+.|...+++-|.....
T Consensus 283 l~~----~~--pL~~~~nvilTPHia~~t-----~e~~~~~~~~~~~ni~~~~~ 325 (352)
T 3gg9_A 283 ILQ----GH--TLLRMENCICTPHIGYVE-----RESYEMYFGIAFQNILDILQ 325 (352)
T ss_dssp CCS----CC--GGGGCTTEEECCSCTTCB-----HHHHHHHHHHHHHHHHHHHT
T ss_pred CCC----CC--hhhcCCCEEECCCCCCCC-----HHHHHHHHHHHHHHHHHHHc
Confidence 211 00 112346888888775211 11224566666666666653
No 181
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=78.50 E-value=2.7 Score=43.09 Aligned_cols=108 Identities=8% Similarity=0.127 Sum_probs=60.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhch-----hhccc------cCCC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-----PWAHE------HEPV 400 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~-----~fA~~------~~~~ 400 (592)
.||.|+|+|..|..+|..+..+ |.....-..+++++|+..-+. .++ .+...++ .|-.. ..-.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~-----G~~~~~~~~~V~~~~r~~~~~-~~~-~~~~l~~~~~~~~~~~~~~~~~~i~~~ 94 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTN-----AKNNYLFENEVRMWIRDEFVN-GER-MVDIINNKHENTKYLKGVPLPHNIVAH 94 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHH-----HHHCTTBCSCEEEECCSCC----CC-HHHHHHHHCBCTTTSTTCBCCTTEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHc-----CCccCCCCCeEEEEECChhhh-hHH-HHHHHHhcCcccccCCcccCcCCeEEE
Confidence 4899999999999999998764 310000014688888753210 000 0111100 00000 0011
Q ss_pred CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHc----cC-CCCceEEecCCCCC
Q 007703 401 NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMAS----FN-EVKPLILALSNPTS 451 (592)
Q Consensus 401 ~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~----~~-e~rPIIFaLSNPt~ 451 (592)
.++.|+++. .|++| ++... -..+++++.++. .. + ..+|..++|-.+
T Consensus 95 ~~~~ea~~~--aDvVi-lav~~-~~~~~vl~~i~~~~~~~l~~-~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 95 SDLASVIND--ADLLI-FIVPC-QYLESVLASIKESESIKIAS-HAKAISLTKGFI 145 (375)
T ss_dssp SSTHHHHTT--CSEEE-ECCCH-HHHHHHHHHHTC---CCCCT-TCEEEECCCSCE
T ss_pred CCHHHHHcC--CCEEE-EcCCH-HHHHHHHHHHhhhhhccCCC-CCEEEEeCCccc
Confidence 467788875 78776 33322 467888888876 43 4 668888998654
No 182
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=78.09 E-value=0.96 Score=42.01 Aligned_cols=94 Identities=15% Similarity=0.171 Sum_probs=58.9
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhc---c--ccCCCCCHHHH
Q 007703 333 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---H--EHEPVNNLLDA 406 (592)
Q Consensus 333 riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA---~--~~~~~~~L~e~ 406 (592)
||+|+| +|..|..+|..+.. .| .+++++|++- ++ +...++.+. . +.. ..++.++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~-----~g-------~~V~~~~r~~----~~---~~~~~~~~~~~~~~~~~~-~~~~~~~ 61 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT-----LG-------HEIVVGSRRE----EK---AEAKAAEYRRIAGDASIT-GMKNEDA 61 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEESSH----HH---HHHHHHHHHHHHSSCCEE-EEEHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHH-----CC-------CEEEEEeCCH----HH---HHHHHHHhccccccCCCC-hhhHHHH
Confidence 799999 99999999988754 25 3688888741 11 111111110 0 011 2468888
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCCC
Q 007703 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPTS 451 (592)
Q Consensus 407 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~ 451 (592)
++. .|++|=+.. . -..+++++.+.+..+ ..+|.-+||+.+
T Consensus 62 ~~~--~D~Vi~~~~-~-~~~~~~~~~l~~~~~-~~~vi~~~~g~~ 101 (212)
T 1jay_A 62 AEA--CDIAVLTIP-W-EHAIDTARDLKNILR-EKIVVSPLVPVS 101 (212)
T ss_dssp HHH--CSEEEECSC-H-HHHHHHHHHTHHHHT-TSEEEECCCCEE
T ss_pred Hhc--CCEEEEeCC-h-hhHHHHHHHHHHHcC-CCEEEEcCCCcC
Confidence 876 888884433 3 235677777654445 678999999774
No 183
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=78.02 E-value=3.3 Score=40.46 Aligned_cols=96 Identities=16% Similarity=0.133 Sum_probs=57.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 410 (592)
-.||.|+|+|..|..+|..+... |. ..+++++|++. +.+...+..-.. .....++.|+++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~-----g~-----~~~V~~~d~~~-------~~~~~~~~~g~~-~~~~~~~~~~~~~- 66 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD-----HP-----HYKIVGYNRSD-------RSRDIALERGIV-DEATADFKVFAAL- 66 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSH-------HHHHHHHHTTSC-SEEESCTTTTGGG-
T ss_pred cceEEEEeeCHHHHHHHHHHHhC-----CC-----CcEEEEEcCCH-------HHHHHHHHcCCc-ccccCCHHHhhcC-
Confidence 35899999999999999988653 32 14688888641 111111110000 0012356666764
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcc--CCCCceEEecCCC
Q 007703 411 KPTILIGSSGVGRTFTKEVIEAMASF--NEVKPLILALSNP 449 (592)
Q Consensus 411 kPtvLIG~S~~~g~Ft~evv~~Ma~~--~e~rPIIFaLSNP 449 (592)
+|++| ++..+... +++++.+.++ .+ ..||.-+||-
T Consensus 67 -aDvVi-lavp~~~~-~~v~~~l~~~~l~~-~~ivi~~~~~ 103 (290)
T 3b1f_A 67 -ADVII-LAVPIKKT-IDFIKILADLDLKE-DVIITDAGST 103 (290)
T ss_dssp -CSEEE-ECSCHHHH-HHHHHHHHTSCCCT-TCEEECCCSC
T ss_pred -CCEEE-EcCCHHHH-HHHHHHHHhcCCCC-CCEEEECCCC
Confidence 78877 44444333 8888888765 35 6677767764
No 184
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=77.96 E-value=4 Score=40.71 Aligned_cols=102 Identities=14% Similarity=0.146 Sum_probs=58.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhc--hhhc-cccCCCCCHHHHhc
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK--KPWA-HEHEPVNNLLDAVK 408 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k--~~fA-~~~~~~~~L~e~V~ 408 (592)
.||.|+|||+-|..+|..|... | .+++++|+.-+ ..=+...+.-.. ..+- ++..-..++.+ ++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~-~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~ 68 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-----G-------EDVHFLLRRDY-EAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IG 68 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-----S-------CCEEEECSTTH-HHHHHTCEEEEETTCCEEESCCCEESCHHH-HC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEEcCcH-HHHHhCCCEEEcCCCeEEEeeceeecCHHH-cC
Confidence 5899999999999999888652 5 36888887531 000000010000 0000 00001134543 44
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCCC
Q 007703 409 VIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPTS 451 (592)
Q Consensus 409 ~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~ 451 (592)
..|++| ++... ...+++++.++.+-....+|+.+.|--.
T Consensus 69 --~~D~vi-lavk~-~~~~~~l~~l~~~l~~~~~iv~l~nGi~ 107 (312)
T 3hn2_A 69 --PMDLVL-VGLKT-FANSRYEELIRPLVEEGTQILTLQNGLG 107 (312)
T ss_dssp --CCSEEE-ECCCG-GGGGGHHHHHGGGCCTTCEEEECCSSSS
T ss_pred --CCCEEE-EecCC-CCcHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 478777 55544 3477899999875432778889999874
No 185
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=77.75 E-value=5.5 Score=41.88 Aligned_cols=111 Identities=12% Similarity=0.116 Sum_probs=60.7
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHh
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V 407 (592)
.++.+||+|+|.|-+|++.|+.+.+ .| .++...|++-..... ..|. .-.++- . .... .+.+
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~-----~G-------~~v~~~D~~~~~~~~--~~l~-~G~~~~-~--g~~~-~~~~ 62 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLA-----RG-------VTPRVMDTRMTPPGL--DKLP-EAVERH-T--GSLN-DEWL 62 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHT-----TT-------CCCEEEESSSSCTTG--GGSC-TTSCEE-E--SSCC-HHHH
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHh-----CC-------CEEEEEECCCCcchh--HHhh-CCCEEE-E--CCCc-HHHh
Confidence 3567899999999999999866643 36 367788886431100 0121 111110 0 0012 5666
Q ss_pred cccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCC
Q 007703 408 KVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGS 474 (592)
Q Consensus 408 ~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~~aEct~e~A~~wt~G~aifAsGS 474 (592)
+ .++.+|=.++.+- -.+++..+... . .|++ +. .|-++...+.+.|-.|||
T Consensus 63 ~--~~d~vV~s~gi~~-~~p~~~~a~~~--~-~~v~-------~~----~~~~~~~~~~~vI~VTGT 112 (439)
T 2x5o_A 63 M--AADLIVASPGIAL-AHPSLSAAADA--G-IEIV-------GD----IELFCREAQAPIVAITGS 112 (439)
T ss_dssp H--TCSEEEECTTSCT-TCHHHHHHHHT--T-CEEE-------CH----HHHHHHHCCSCEEEEECS
T ss_pred c--cCCEEEeCCCCCC-CCHHHHHHHHC--C-CcEE-------EH----HHHHHHhcCCCEEEEECC
Confidence 6 4788775555542 35666665432 2 3333 11 233334455778888886
No 186
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=77.68 E-value=8.6 Score=39.70 Aligned_cols=95 Identities=19% Similarity=0.347 Sum_probs=50.4
Q ss_pred HHHHHHHHHhC-CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhc
Q 007703 316 AGVVAALKLIG-GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (592)
Q Consensus 316 Agll~Alr~~g-~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA 394 (592)
+..+.|+...+ ..-.+++|+|+|||..|...+.+.. ..|. ++++.+|+. +.+..+|
T Consensus 198 ~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak-----~~Ga------~~Vi~~~~~------------~~~~~~~ 254 (404)
T 3ip1_A 198 SVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILK-----HAGA------SKVILSEPS------------EVRRNLA 254 (404)
T ss_dssp HHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHH-----HTTC------SEEEEECSC------------HHHHHHH
T ss_pred HHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHH-----HcCC------CEEEEECCC------------HHHHHHH
Confidence 33344444333 4446789999999877755544432 2464 578877652 2233333
Q ss_pred cc-------cCCCCCHHHHhcc----cCCcEEEeccCCCCCCCHHHHHHH
Q 007703 395 HE-------HEPVNNLLDAVKV----IKPTILIGSSGVGRTFTKEVIEAM 433 (592)
Q Consensus 395 ~~-------~~~~~~L~e~V~~----vkPtvLIG~S~~~g~Ft~evv~~M 433 (592)
+. .....++.+.|+. -+.|++|-+++......+..++.+
T Consensus 255 ~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l 304 (404)
T 3ip1_A 255 KELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVI 304 (404)
T ss_dssp HHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHH
T ss_pred HHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHH
Confidence 32 0111345555544 368888877764311223344444
No 187
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=77.44 E-value=2.1 Score=42.57 Aligned_cols=33 Identities=15% Similarity=0.318 Sum_probs=26.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
..||.|+|+|..|.++|..+.. .| .+++++|++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~-----~G-------~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTE-----WP-------GGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTT-----ST-------TCEEEECSS
T ss_pred CCeEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEeCC
Confidence 3589999999999999998864 25 357888874
No 188
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=77.43 E-value=1.9 Score=40.96 Aligned_cols=94 Identities=15% Similarity=0.165 Sum_probs=55.5
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhc
Q 007703 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 408 (592)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~ 408 (592)
-...||.|+|+|..|..+|..+.. .|. +++++|++- ++ +. .++...-...++.++++
T Consensus 26 ~~~~~I~iiG~G~~G~~la~~l~~-----~g~-------~V~~~~r~~----~~---~~----~~~~~g~~~~~~~~~~~ 82 (215)
T 2vns_A 26 DEAPKVGILGSGDFARSLATRLVG-----SGF-------KVVVGSRNP----KR---TA----RLFPSAAQVTFQEEAVS 82 (215)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSH----HH---HH----HHSBTTSEEEEHHHHTT
T ss_pred CCCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----HH---HH----HHHHcCCceecHHHHHh
Confidence 345689999999999999988764 253 588887641 11 11 11111101126778887
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCCC
Q 007703 409 VIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPTS 451 (592)
Q Consensus 409 ~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~ 451 (592)
. +|++|=+.. +. ..+++++ ++...+ .-+|.-+||+..
T Consensus 83 ~--~DvVi~av~-~~-~~~~v~~-l~~~~~-~~~vv~~s~g~~ 119 (215)
T 2vns_A 83 S--PEVIFVAVF-RE-HYSSLCS-LSDQLA-GKILVDVSNPTE 119 (215)
T ss_dssp S--CSEEEECSC-GG-GSGGGGG-GHHHHT-TCEEEECCCCCH
T ss_pred C--CCEEEECCC-hH-HHHHHHH-HHHhcC-CCEEEEeCCCcc
Confidence 4 888884333 32 3455554 333335 678999999873
No 189
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=77.41 E-value=1.3 Score=45.69 Aligned_cols=106 Identities=16% Similarity=0.208 Sum_probs=63.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcccc-CCCCCHHHHhcc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNLLDAVKV 409 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~-~~~~~L~e~V~~ 409 (592)
..||.|+|||..|..+|..|+.. |+ ...+.++|.+-=..++-.-+|.+. .+|.... .-..+-.++++.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~-----~~-----~~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~a~~~ 73 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ-----GI-----TDELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVKTSYGTYEDCKD 73 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCEEEEECGGGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEecchHHHHHHHHHHHhc-cccccCCeEEEeCcHHHhCC
Confidence 46899999999999999988753 54 258999997410000000012222 2332100 000122356665
Q ss_pred cCCcEEEeccCC---CCC-----C------CHHHHHHHHccCCCCceEEecCCCC
Q 007703 410 IKPTILIGSSGV---GRT-----F------TKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 410 vkPtvLIG~S~~---~g~-----F------t~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
.|++|=+.+. +|- | -+++++.+.+++. .-+|+-.|||.
T Consensus 74 --aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p-~a~vlvvtNPv 125 (326)
T 3pqe_A 74 --ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGF-DGIFLVATNPV 125 (326)
T ss_dssp --CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTC-CSEEEECSSSH
T ss_pred --CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcC-CeEEEEcCChH
Confidence 8887744433 332 1 2577788888999 99999999998
No 190
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=77.28 E-value=1.8 Score=41.71 Aligned_cols=97 Identities=12% Similarity=0.204 Sum_probs=55.8
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcc
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~ 409 (592)
+..||+|.|||-.|..+++.|++ .| .+++.++++- +.+.+.-..+.-+-....++.++++.
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~-----~g-------~~V~~~~r~~-------~~~~~~~~~~~~Dl~d~~~~~~~~~~ 62 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTA-----QG-------HEVTGLRRSA-------QPMPAGVQTLIADVTRPDTLASIVHL 62 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECTT-------SCCCTTCCEEECCTTCGGGCTTGGGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCCc-------cccccCCceEEccCCChHHHHHhhcC
Confidence 34689999999888888877764 25 3677777641 11221111111122222345556664
Q ss_pred cCCcEEEeccCCCC-----------CCCHHHHHHHHccCCCCceEEecC
Q 007703 410 IKPTILIGSSGVGR-----------TFTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 410 vkPtvLIG~S~~~g-----------~Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
++|++|=+.+... ..+..+++++.+..- +-+||.=|
T Consensus 63 -~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-~~~v~~SS 109 (286)
T 3gpi_A 63 -RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPL-QHVFFVSS 109 (286)
T ss_dssp -CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCC-CEEEEEEE
T ss_pred -CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCC-CEEEEEcc
Confidence 6999996654321 125677777776554 66787544
No 191
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=77.27 E-value=1.5 Score=44.24 Aligned_cols=110 Identities=18% Similarity=0.149 Sum_probs=64.6
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCc---ccCCCccCCchhchhhccccCCCCCHHHHh
Q 007703 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL---IVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (592)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL---v~~~R~~~l~~~k~~fA~~~~~~~~L~e~V 407 (592)
.||+|.|| |..|.-++..|+. .|.--..-...++++|...- ...... +|.+...+|..+-....++.+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~g~~~-dl~~~~~~~~~di~~~~~~~~a~ 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALEGVVM-ELEDCAFPLLAGLEATDDPKVAF 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHH-HHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhccchhh-hhhcccccccCCeEeccChHHHh
Confidence 48999997 9999998887654 24310000137999997420 000000 12111112322211224688888
Q ss_pred cccCCcEEEeccCCCCC--------------CCHHHHHHHHccC-CCCceEEecCCCC
Q 007703 408 KVIKPTILIGSSGVGRT--------------FTKEVIEAMASFN-EVKPLILALSNPT 450 (592)
Q Consensus 408 ~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~-e~rPIIFaLSNPt 450 (592)
+. +|++|=+.+.+.. .|.++++++.+++ . +.+++-.|||.
T Consensus 79 ~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~-~~~vvv~snp~ 133 (327)
T 1y7t_A 79 KD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKK-DVKVLVVGNPA 133 (327)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCT-TCEEEECSSSH
T ss_pred CC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCC-CeEEEEeCCch
Confidence 75 8999977665532 3556788888875 5 66788899996
No 192
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=77.15 E-value=6.8 Score=38.51 Aligned_cols=106 Identities=12% Similarity=0.136 Sum_probs=62.0
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchh----chhhcc-ccCCCCC
Q 007703 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF----KKPWAH-EHEPVNN 402 (592)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~----k~~fA~-~~~~~~~ 402 (592)
+...||+|.|| |-.|..+++.|++. |- .-+++.+|+...- .....+... +..+.. +-....+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g~-----~~~v~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~Dl~d~~~ 89 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQS-----YE-----TYKIINFDALTYS--GNLNNVKSIQDHPNYYFVKGEIQNGEL 89 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHH-----CT-----TEEEEEEECCCTT--CCGGGGTTTTTCTTEEEEECCTTCHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhh-----CC-----CcEEEEEeccccc--cchhhhhhhccCCCeEEEEcCCCCHHH
Confidence 45679999998 88888888877653 52 2467777765321 111111111 111111 1122246
Q ss_pred HHHHhcccCCcEEEeccCCCCCC----------------CHHHHHHHHccCCCCceEEecC
Q 007703 403 LLDAVKVIKPTILIGSSGVGRTF----------------TKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 403 L~e~V~~vkPtvLIG~S~~~g~F----------------t~evv~~Ma~~~e~rPIIFaLS 447 (592)
+.++++..++|++|=+.+....- |..+++++.+..- +-+||.=|
T Consensus 90 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~v~~SS 149 (346)
T 4egb_A 90 LEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPH-IKLVQVST 149 (346)
T ss_dssp HHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTT-SEEEEEEE
T ss_pred HHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCC-CEEEEeCc
Confidence 88888888899999877754321 3567888877655 66888544
No 193
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=77.08 E-value=1.1 Score=44.57 Aligned_cols=102 Identities=14% Similarity=0.132 Sum_probs=59.7
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCc---hh---chhhcc-ccCC
Q 007703 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ---HF---KKPWAH-EHEP 399 (592)
Q Consensus 328 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~---~~---k~~fA~-~~~~ 399 (592)
+++..+|+|.|| |-.|-.|++.|++ .| .+++.++++.- ...+.+. .. ...+.. +-.+
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~~-----~g-------~~V~~l~R~~~---~~~~~~~~~~~l~~~~v~~~~~Dl~d 71 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASLD-----AH-------RPTYILARPGP---RSPSKAKIFKALEDKGAIIVYGLINE 71 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSC---CCHHHHHHHHHHHHTTCEEEECCTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CCEEEEECCCC---CChhHHHHHHHHHhCCcEEEEeecCC
Confidence 345679999999 8888888887764 25 46888877520 0000010 00 000111 1122
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCC-CCHHHHHHHHccCCCCceEE
Q 007703 400 VNNLLDAVKVIKPTILIGSSGVGRT-FTKEVIEAMASFNEVKPLIL 444 (592)
Q Consensus 400 ~~~L~e~V~~vkPtvLIG~S~~~g~-Ft~evv~~Ma~~~e~rPIIF 444 (592)
..+|.++++..++|++|=+.+..++ -+..+++++.+....+-+|+
T Consensus 72 ~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 72 QEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred HHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 2468888887779999988775432 37889999987662155665
No 194
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=76.81 E-value=2 Score=43.26 Aligned_cols=34 Identities=18% Similarity=0.300 Sum_probs=27.2
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
...||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 457999999999999999988753 53 57777764
No 195
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=76.63 E-value=3.4 Score=40.21 Aligned_cols=30 Identities=20% Similarity=0.330 Sum_probs=23.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEc
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD 373 (592)
.||.|+|+|..|..+|..+.. .|. +++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLAR-----AGH-------QLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHH-----TTC-------EEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHh-----CCC-------EEEEEc
Confidence 489999999999999998864 253 577776
No 196
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=76.54 E-value=2 Score=42.16 Aligned_cols=32 Identities=19% Similarity=0.283 Sum_probs=26.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.||.|+|+|..|..+|..+... | .+++++|++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----G-------FDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 3799999999999999988764 5 357888874
No 197
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=76.37 E-value=3.1 Score=41.21 Aligned_cols=32 Identities=22% Similarity=0.380 Sum_probs=25.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.||.|+|+|..|..+|..+.. .|. +++++|+.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~-----~g~-------~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLK-----MGH-------TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 689999999999999998864 253 57888764
No 198
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=76.29 E-value=2.5 Score=45.71 Aligned_cols=36 Identities=6% Similarity=-0.145 Sum_probs=25.5
Q ss_pred CccCCcccccchhhhHHHHHhCCcccCHHHHHHHHH
Q 007703 487 VPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASE 522 (592)
Q Consensus 487 ~p~Q~NN~yiFPGiglG~~~s~a~~Itd~m~~aAA~ 522 (592)
.||+.-|-+++|.+.=++.+....-++.+.+.+|.+
T Consensus 232 ~pGfi~Nril~~~~~EA~~l~~~~Ga~~e~ID~a~~ 267 (460)
T 3k6j_A 232 CKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIIT 267 (460)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 588888888889888777777333367777666643
No 199
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=75.71 E-value=12 Score=38.70 Aligned_cols=209 Identities=14% Similarity=0.109 Sum_probs=116.9
Q ss_pred eeeeecCCCchHHHHHHHHcCCCceeccCC---cchHHHHHHHHHHHHHHh------------------------C-CCc
Q 007703 278 LIQFEDFANHNAFELLAKYGTTHLVFNDDI---QGTASVVLAGVVAALKLI------------------------G-GTL 329 (592)
Q Consensus 278 lIqfEDf~~~~Af~lL~ryr~~~~~FNDDi---QGTaaV~LAgll~Alr~~------------------------g-~~l 329 (592)
+|+.--.+..| .++-.--+..+.+.|--- +.+|=-+++.+|+..|.. | ..|
T Consensus 88 ~I~~~~~G~d~-id~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l 166 (347)
T 1mx3_A 88 IIVRIGSGFDN-IDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARI 166 (347)
T ss_dssp EEEESSSCCTT-BCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCC
T ss_pred EEEEcccccCc-ccHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCC
Confidence 36655555544 222112234677776433 234455788888887721 1 468
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcc
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~ 409 (592)
.+.++.|+|.|..|..+|+.+.. .|+ +++.+|++- .. .. ...+ ......+|.|+++.
T Consensus 167 ~g~tvGIIG~G~IG~~vA~~l~~-----~G~-------~V~~~d~~~----~~--~~---~~~~--g~~~~~~l~ell~~ 223 (347)
T 1mx3_A 167 RGETLGIIGLGRVGQAVALRAKA-----FGF-------NVLFYDPYL----SD--GV---ERAL--GLQRVSTLQDLLFH 223 (347)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECTTS----CT--TH---HHHH--TCEECSSHHHHHHH
T ss_pred CCCEEEEEeECHHHHHHHHHHHH-----CCC-------EEEEECCCc----ch--hh---Hhhc--CCeecCCHHHHHhc
Confidence 89999999999999999998753 364 588888641 11 01 1111 01122478888876
Q ss_pred cCCcEEEecc----CCCCCCCHHHHHHHHccCCCCceEEecCCCCCCCCCCHHHHhccccCcEEEe-----cCCCCCcce
Q 007703 410 IKPTILIGSS----GVGRTFTKEVIEAMASFNEVKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFE 480 (592)
Q Consensus 410 vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~~aEct~e~A~~wt~G~aifA-----sGSPF~pV~ 480 (592)
.|+++=.- ...++++++.++.|.+ .-++.=.|+=..--|..-.+|++ +|+.-.| ..-|+++
T Consensus 224 --aDvV~l~~P~t~~t~~li~~~~l~~mk~----gailIN~arg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EP~~~-- 293 (347)
T 1mx3_A 224 --SDCVTLHCGLNEHNHHLINDFTVKQMRQ----GAFLVNTARGGLVDEKALAQALK--EGRIRGAALDVHESEPFSF-- 293 (347)
T ss_dssp --CSEEEECCCCCTTCTTSBSHHHHTTSCT----TEEEEECSCTTSBCHHHHHHHHH--HTSEEEEEESCCSSSSCCT--
T ss_pred --CCEEEEcCCCCHHHHHHhHHHHHhcCCC----CCEEEECCCChHHhHHHHHHHHH--hCCCcEEEEeecccCCCCC--
Confidence 88877432 2346788888887764 66787777644223333334443 4544322 2333221
Q ss_pred eCCeeeCccCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHccc
Q 007703 481 YNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQV 528 (592)
Q Consensus 481 ~~G~~~~p~Q~NN~yiFPGiglG~~~s~a~~Itd~m~~aAA~aLA~~v 528 (592)
.+.. -=..+|+.+-|=++-. +......|...+++-+....
T Consensus 294 -~~~~--L~~~~nvi~tPHia~~-----t~~~~~~~~~~~~~ni~~~~ 333 (347)
T 1mx3_A 294 -SQGP--LKDAPNLICTPHAAWY-----SEQASIEMREEAAREIRRAI 333 (347)
T ss_dssp -TSST--TTTCSSEEECSSCTTC-----CHHHHHHHHHHHHHHHHHHH
T ss_pred -CCch--HHhCCCEEEEchHHHH-----HHHHHHHHHHHHHHHHHHHH
Confidence 1111 1246899999987632 12223445555555555554
No 200
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=75.26 E-value=8.8 Score=39.39 Aligned_cols=195 Identities=14% Similarity=0.105 Sum_probs=107.5
Q ss_pred CCCceeccCC---cchHHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcChHHHHHHHHHHHHH
Q 007703 298 TTHLVFNDDI---QGTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEI 354 (592)
Q Consensus 298 ~~~~~FNDDi---QGTaaV~LAgll~Alr~--------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~ 354 (592)
..+.+.|--- +.+|=-+++-+|+..|. .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 89 ~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~-- 166 (330)
T 4e5n_A 89 RGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQG-- 166 (330)
T ss_dssp TTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTT--
T ss_pred cCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHH--
Confidence 3455555422 23455567777776653 2456899999999999999999998743
Q ss_pred HHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHH
Q 007703 355 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVI 430 (592)
Q Consensus 355 ~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv 430 (592)
.|+ +++.+|+... . ....+..-+ ...+|.|+++. .|+++=.- ...++++++.+
T Consensus 167 ---~G~-------~V~~~d~~~~----~---~~~~~~~g~----~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l 223 (330)
T 4e5n_A 167 ---WGA-------TLQYHEAKAL----D---TQTEQRLGL----RQVACSELFAS--SDFILLALPLNADTLHLVNAELL 223 (330)
T ss_dssp ---SCC-------EEEEECSSCC----C---HHHHHHHTE----EECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHH
T ss_pred ---CCC-------EEEEECCCCC----c---HhHHHhcCc----eeCCHHHHHhh--CCEEEEcCCCCHHHHHHhCHHHH
Confidence 364 5888887531 0 111111101 12378898886 78887542 23468899988
Q ss_pred HHHHccCCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCcceeCCeeeCc-------cCCcccccchhhhHH
Q 007703 431 EAMASFNEVKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVP-------GQANNAYIFPGFGLG 503 (592)
Q Consensus 431 ~~Ma~~~e~rPIIFaLSNPt~~aEct~e~A~~wt~G~aifAsGSPF~pV~~~G~~~~p-------~Q~NN~yiFPGiglG 503 (592)
+.|.+ ..+|.=.|+-..--|-.-.+|+ ..|+.-.|-=-=|++-.+ .....| =+..|+.+-|=+|-.
T Consensus 224 ~~mk~----gailIN~arg~~vd~~aL~~aL--~~g~i~gA~lDV~~~E~~-~~~~~Pl~~~~~L~~~~nvilTPHia~~ 296 (330)
T 4e5n_A 224 ALVRP----GALLVNPCRGSVVDEAAVLAAL--ERGQLGGYAADVFEMEDW-ARADRPQQIDPALLAHPNTLFTPHIGSA 296 (330)
T ss_dssp TTSCT----TEEEEECSCGGGBCHHHHHHHH--HHTSEEEEEESCCGGGCT-TCTTCCSSCCHHHHTCSSEEECSSCTTC
T ss_pred hhCCC----CcEEEECCCCchhCHHHHHHHH--HhCCccEEEecccccccc-cccCCCCCCCchHHcCCCEEECCcCCCC
Confidence 88875 7788877764322233333444 345544332111111100 000001 134577777776532
Q ss_pred HHHhCCcccCHHHHHHHHHHHHcccC
Q 007703 504 LVISGAIRVHDDMLLAASEALAKQVT 529 (592)
Q Consensus 504 ~~~s~a~~Itd~m~~aAA~aLA~~v~ 529 (592)
. ..-.+.|...+++-|.....
T Consensus 297 t-----~e~~~~~~~~~~~ni~~~~~ 317 (330)
T 4e5n_A 297 V-----RAVRLEIERCAAQNILQALA 317 (330)
T ss_dssp C-----HHHHHHHHHHHHHHHHHHHT
T ss_pred h-----HHHHHHHHHHHHHHHHHHHc
Confidence 1 11234555666666665554
No 201
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=74.94 E-value=4.9 Score=39.00 Aligned_cols=97 Identities=14% Similarity=0.166 Sum_probs=57.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 411 (592)
.||.|+|+|..|..+|..+.. .|.. .+++++|++. +.+...++.-..+ ....++.++++. +
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~-----~g~~-----~~V~~~d~~~-------~~~~~~~~~g~~~-~~~~~~~~~~~~-~ 62 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR-----SGFK-----GKIYGYDINP-------ESISKAVDLGIID-EGTTSIAKVEDF-S 62 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-----TTCC-----SEEEEECSCH-------HHHHHHHHTTSCS-EEESCGGGGGGT-C
T ss_pred cEEEEEecCHHHHHHHHHHHh-----cCCC-----cEEEEEeCCH-------HHHHHHHHCCCcc-cccCCHHHHhcC-C
Confidence 379999999999999998864 2541 3688888641 1111111000000 012457677762 4
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHcc-CCCCceEEecCCCC
Q 007703 412 PTILIGSSGVGRTFTKEVIEAMASF-NEVKPLILALSNPT 450 (592)
Q Consensus 412 PtvLIG~S~~~g~Ft~evv~~Ma~~-~e~rPIIFaLSNPt 450 (592)
+|++| ++..+ -.+.++++.+.++ .+ ..+|.-+||-.
T Consensus 63 aDvVi-lavp~-~~~~~v~~~l~~~l~~-~~iv~~~~~~~ 99 (281)
T 2g5c_A 63 PDFVM-LSSPV-RTFREIAKKLSYILSE-DATVTDQGSVK 99 (281)
T ss_dssp CSEEE-ECSCH-HHHHHHHHHHHHHSCT-TCEEEECCSCC
T ss_pred CCEEE-EcCCH-HHHHHHHHHHHhhCCC-CcEEEECCCCc
Confidence 88887 44333 2566788877653 34 66777777744
No 202
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=74.93 E-value=5.4 Score=37.24 Aligned_cols=97 Identities=13% Similarity=0.107 Sum_probs=54.7
Q ss_pred CCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhc---h-hhcc-ccCCC
Q 007703 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK---K-PWAH-EHEPV 400 (592)
Q Consensus 327 ~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k---~-~fA~-~~~~~ 400 (592)
.+|++.+|+|.|| |-.|..+++.|++ .| .++++++++. + .+...+ . .+.. |-.
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~R~~----~---~~~~~~~~~~~~~~~~Dl~-- 75 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKN-----KG-------HEPVAMVRNE----E---QGPELRERGASDIVVANLE-- 75 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSG----G---GHHHHHHTTCSEEEECCTT--
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHh-----CC-------CeEEEEECCh----H---HHHHHHhCCCceEEEcccH--
Confidence 4578899999998 7778777777764 25 3688887741 1 121111 1 1111 111
Q ss_pred CCHHHHhcccCCcEEEeccCCCCC------------CCHHHHHHHHccCCCCceEEecC
Q 007703 401 NNLLDAVKVIKPTILIGSSGVGRT------------FTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 401 ~~L~e~V~~vkPtvLIG~S~~~g~------------Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
.++.++++ ++|++|=+.+.... -+..+++++.+..- +-|||.=|
T Consensus 76 ~~~~~~~~--~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~iv~~SS 131 (236)
T 3e8x_A 76 EDFSHAFA--SIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGI-KRFIMVSS 131 (236)
T ss_dssp SCCGGGGT--TCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTC-CEEEEECC
T ss_pred HHHHHHHc--CCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCC-CEEEEEec
Confidence 55667776 59999977765421 03456666655444 55666444
No 203
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=74.36 E-value=3.4 Score=41.26 Aligned_cols=36 Identities=17% Similarity=0.300 Sum_probs=28.2
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.+...||.|+|.|..|.++|..+... |. +++++|++
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 41 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRS 41 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 34567999999999999999988753 63 57777764
No 204
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=74.31 E-value=3.9 Score=43.51 Aligned_cols=124 Identities=12% Similarity=0.169 Sum_probs=73.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHH-hcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcccc---CCCCCHHHHh
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISK-QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH---EPVNNLLDAV 407 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~-~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~---~~~~~L~e~V 407 (592)
.||.|+|||+. ++..++..+.+ ..++. -+.++|+|.+- +|-+.........++.. ....++.+++
T Consensus 3 ~KI~IIGaG~v---~~~~l~~~l~~~~~~l~----~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v~~t~d~~~al 71 (417)
T 1up7_A 3 MRIAVIGGGSS---YTPELVKGLLDISEDVR----IDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKVLISDTFEGAV 71 (417)
T ss_dssp CEEEEETTTCT---THHHHHHHHHHHTTTSC----CCEEEEECSCH----HHHHHHHHHHHHHHTTSSEEEECSSHHHHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHhcccCCC----cCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEEEEeCCHHHHh
Confidence 58999999994 66655444443 23442 36799999752 22110001111111111 1125788999
Q ss_pred cccCCcEEEeccCCCC---------------CC-------------------CHHHHHHHHccCCCCceEEecCCCCCCC
Q 007703 408 KVIKPTILIGSSGVGR---------------TF-------------------TKEVIEAMASFNEVKPLILALSNPTSQS 453 (592)
Q Consensus 408 ~~vkPtvLIG~S~~~g---------------~F-------------------t~evv~~Ma~~~e~rPIIFaLSNPt~~a 453 (592)
+. .|++|=..++++ +. =.++++.|.++| .-+|+-.|||. .
T Consensus 72 ~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~--~A~lin~TNPv--d 145 (417)
T 1up7_A 72 VD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS--NATIVNFTNPS--G 145 (417)
T ss_dssp TT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT--CCEEEECSSSH--H
T ss_pred CC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC--CEEEEEeCChH--H
Confidence 87 999997777653 22 258889999988 79999999998 2
Q ss_pred CCCHHHHhccccCcEEEecC
Q 007703 454 ECTAEEAYTWSKGRAIFASG 473 (592)
Q Consensus 454 Ect~e~A~~wt~G~aifAsG 473 (592)
+..+-+++.+.-.-+|.+|
T Consensus 146 -i~t~a~~k~~p~~rviG~c 164 (417)
T 1up7_A 146 -HITEFVRNYLEYEKFIGLC 164 (417)
T ss_dssp -HHHHHHHHTTCCSSEEECC
T ss_pred -HHHHHHHHhCCCCCEEEeC
Confidence 2233344555332455554
No 205
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=74.10 E-value=4.4 Score=42.06 Aligned_cols=107 Identities=17% Similarity=0.349 Sum_probs=62.8
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcccc-CCCCCHHHH
Q 007703 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNLLDA 406 (592)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~-~~~~~L~e~ 406 (592)
+...||.|+|| |..|..+|-.++. .|+ ...+.|+|.+-=..++-.-+|.+. .|.... .-..++.++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~-----~~evvLiDi~~~k~~g~a~DL~~~--~~~~~~i~~t~d~~~a 73 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRL-----TPNLCLYDPFAVGLEGVAEEIRHC--GFEGLNLTFTSDIKEA 73 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTC-----CSCEEEECSCHHHHHHHHHHHHHH--CCTTCCCEEESCHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCC-----CCEEEEEeCCchhHHHHHHhhhhC--cCCCCceEEcCCHHHH
Confidence 34679999998 9999999865543 365 246999997410000000012221 221100 011478888
Q ss_pred hcccCCcEEEeccCCC---CC-----------CCHHHHHHHHccCCCCce-EEecCCCC
Q 007703 407 VKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEVKPL-ILALSNPT 450 (592)
Q Consensus 407 V~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~e~rPI-IFaLSNPt 450 (592)
++. .|++|=+.+.+ |- .-+++++.+.+++. .-+ |+-.|||.
T Consensus 74 l~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p-~a~~vlvvsNPv 129 (343)
T 3fi9_A 74 LTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCP-DCKHVIIIFNPA 129 (343)
T ss_dssp HTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCT-TCCEEEECSSSH
T ss_pred hCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcc-CcEEEEEecCch
Confidence 886 89887444333 31 22456677778888 885 88899997
No 206
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=74.03 E-value=13 Score=38.29 Aligned_cols=111 Identities=14% Similarity=0.134 Sum_probs=70.5
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHH
Q 007703 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (592)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e 405 (592)
|..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+. .+ + ...... ....+|.|
T Consensus 136 ~~~l~g~tvGIiG~G~IG~~va~~~~~f-----g~-------~v~~~d~~-----~~-~---~~~~~~----~~~~~l~e 190 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVLCYDVV-----KR-E---DLKEKG----CVYTSLDE 190 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS-----CC-H---HHHHTT----CEECCHHH
T ss_pred cceecCcEEEEECcchHHHHHHHhhccc-----Cc-------eeeecCCc-----cc-h---hhhhcC----ceecCHHH
Confidence 4678899999999999999999887543 64 56777753 11 1 111111 11257999
Q ss_pred HhcccCCcEEEec----cCCCCCCCHHHHHHHHccCCCCceEEecCCCCCCCCCCHHHHhcc--ccCcEEEe
Q 007703 406 AVKVIKPTILIGS----SGVGRTFTKEVIEAMASFNEVKPLILALSNPTSQSECTAEEAYTW--SKGRAIFA 471 (592)
Q Consensus 406 ~V~~vkPtvLIG~----S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~~aEct~e~A~~w--t~G~aifA 471 (592)
.++. .|+++=. ...-+.|+++.++.|.+ ..++.=.|. -++-=|+|+-. ..|+.--|
T Consensus 191 ll~~--sDivslh~Plt~~T~~li~~~~l~~mk~----~a~lIN~aR----G~iVde~aL~~aL~~g~i~gA 252 (334)
T 3kb6_A 191 LLKE--SDVISLHVPYTKETHHMINEERISLMKD----GVYLINTAR----GKVVDTDALYRAYQRGKFSGL 252 (334)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBCHHHHHHSCT----TEEEEECSC----GGGBCHHHHHHHHHTTCEEEE
T ss_pred HHhh--CCEEEEcCCCChhhccCcCHHHHhhcCC----CeEEEecCc----cccccHHHHHHHHHhCCceEE
Confidence 9987 8888732 23357999999999975 556664443 44444444321 35655433
No 207
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=73.94 E-value=3.5 Score=39.50 Aligned_cols=76 Identities=17% Similarity=0.264 Sum_probs=45.0
Q ss_pred CcccceEEEeCc-Ch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc----------
Q 007703 328 TLAEHRFLFLGA-GE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH---------- 395 (592)
Q Consensus 328 ~l~d~riv~~GA-Gs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~---------- 395 (592)
.++++++||.|| |+ .|..+|+.+++ .| .+++++|++- +.+...+..+..
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~-----~G-------~~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~ 79 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALL-----EG-------ADVVISDYHE-------RRLGETRDQLADLGLGRVEAVV 79 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHH-----TT-------CEEEEEESCH-------HHHHHHHHHHHTTCSSCEEEEE
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHH-----CC-------CEEEEecCCH-------HHHHHHHHHHHhcCCCceEEEE
Confidence 478899999999 74 77777777764 36 3588887741 112222222211
Q ss_pred -ccCCCCCHHHHhccc-----CCcEEEeccCCC
Q 007703 396 -EHEPVNNLLDAVKVI-----KPTILIGSSGVG 422 (592)
Q Consensus 396 -~~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 422 (592)
|-....++.++++.+ ++|+||=..+..
T Consensus 80 ~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~ 112 (266)
T 3o38_A 80 CDVTSTEAVDALITQTVEKAGRLDVLVNNAGLG 112 (266)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred eCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcC
Confidence 111123455566655 799999776654
No 208
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=73.88 E-value=8.2 Score=38.41 Aligned_cols=94 Identities=18% Similarity=0.239 Sum_probs=54.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhc---cc-------c--CC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---HE-------H--EP 399 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA---~~-------~--~~ 399 (592)
.||.|+|+|..|..+|..+.. .| .+++++|++.= .+...++... .. . ..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~-----~g-------~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLAL-----KG-------QSVLAWDIDAQ-------RIKEIQDRGAIIAEGPGLAGTAHPDLL 65 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSCHH-------HHHHHHHHTSEEEESSSCCEEECCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeCCHH-------HHHHHHhcCCeEEecccccccccccee
Confidence 589999999999999988764 25 35788887410 0111111100 00 0 01
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCC
Q 007703 400 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSN 448 (592)
Q Consensus 400 ~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSN 448 (592)
..++.++++. +|++|=+.. . -..+++++.+++..+...+|+.+.|
T Consensus 66 ~~~~~~~~~~--~D~vi~~v~-~-~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 66 TSDIGLAVKD--ADVILIVVP-A-IHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp ESCHHHHHTT--CSEEEECSC-G-GGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred cCCHHHHHhc--CCEEEEeCC-c-hHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 2467787764 787763332 2 2358888888764332556666644
No 209
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=73.82 E-value=7.7 Score=41.32 Aligned_cols=71 Identities=25% Similarity=0.396 Sum_probs=47.3
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcc
Q 007703 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (592)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~ 409 (592)
--|++|+|+ |-+|.|-++.+.. .|.. ..++..+|.+= ..+.. +| +.++
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~-----lGa~----~~~V~v~D~~~---~~~g~-------~~-----------~~i~- 262 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHK-----VGIP----DANILKWDIKE---TSRGG-------PF-----------DEIP- 262 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHH-----TTCC----GGGEEEECHHH---HTTCS-------CC-----------THHH-
T ss_pred CCeEEEEcCCCHHHHHHHHHHHh-----CCCC----cCceEEeeccc---cccCC-------ch-----------hhHh-
Confidence 468999999 9999999987764 3641 12566666641 01100 01 2344
Q ss_pred cCCcEEEeccCC----CCCCCHHHHHHH
Q 007703 410 IKPTILIGSSGV----GRTFTKEVIEAM 433 (592)
Q Consensus 410 vkPtvLIG~S~~----~g~Ft~evv~~M 433 (592)
..|++||+--. +-++|+|+++.|
T Consensus 263 -~aDivIn~vlig~~aP~Lvt~e~v~~m 289 (394)
T 2qrj_A 263 -QADIFINCIYLSKPIAPFTNMEKLNNP 289 (394)
T ss_dssp -HSSEEEECCCCCSSCCCSCCHHHHCCT
T ss_pred -hCCEEEECcCcCCCCCcccCHHHHhcC
Confidence 38999998664 568999999998
No 210
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=73.77 E-value=9 Score=37.78 Aligned_cols=104 Identities=14% Similarity=0.220 Sum_probs=58.5
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchh-chhhcc-ccCCCCCHH
Q 007703 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-KKPWAH-EHEPVNNLL 404 (592)
Q Consensus 328 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~-k~~fA~-~~~~~~~L~ 404 (592)
.++..+|+|.|| |-.|..+++.|++ .| .+++.+|++. ....+.+... +..+.. +-....++.
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~l~~~~~~~~~~~Dl~d~~~~~ 82 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLE-----RG-------DKVVGIDNFA---TGRREHLKDHPNLTFVEGSIADHALVN 82 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCCCTTEEEEECCTTCHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhHhhcCCceEEEEeCCCHHHHH
Confidence 355678999996 7777777776654 25 4688888752 1111112110 111111 212223577
Q ss_pred HHhcccCCcEEEeccCCCCC-------------CCHHHHHHHHccCCCCceEEecC
Q 007703 405 DAVKVIKPTILIGSSGVGRT-------------FTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 405 e~V~~vkPtvLIG~S~~~g~-------------Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
++++..++|++|=+.+.... -+..+++++.+..- +.|||.=|
T Consensus 83 ~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~-~~iV~~SS 137 (333)
T 2q1w_A 83 QLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNV-GRFVYFQT 137 (333)
T ss_dssp HHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTC-SEEEEEEE
T ss_pred HHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCC-CEEEEECc
Confidence 78877789999987775432 03457777776555 67888544
No 211
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=73.40 E-value=2.2 Score=45.80 Aligned_cols=37 Identities=27% Similarity=0.460 Sum_probs=32.5
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.|++.||+++|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 37 ~L~~~~VlvvG~GGlGs~va~~La~a-----Gv------g~i~ivD~D 73 (434)
T 1tt5_B 37 LLDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 73 (434)
T ss_dssp HHHTCCEEEECSSTHHHHHHHHHHHT-----TC------CCEEEEECC
T ss_pred HhcCCEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 45788999999999999999999874 87 789999976
No 212
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=73.32 E-value=2.8 Score=40.97 Aligned_cols=32 Identities=19% Similarity=0.249 Sum_probs=25.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.||.|+|+|..|..+|..+.. .|. +++++|++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLK-----EGV-------TVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHH-----CCC-------eEEEEeCC
Confidence 589999999999999988764 253 57788763
No 213
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=73.29 E-value=2.2 Score=43.72 Aligned_cols=89 Identities=21% Similarity=0.297 Sum_probs=53.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc----ccCCCCCHHHHh
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----EHEPVNNLLDAV 407 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~----~~~~~~~L~e~V 407 (592)
.||+|+|||-.|--+|+.|.+ ..++.++|... ++++..+ +++. +..+..+|.+++
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~-------~~~~~~~-~~~~~~~~d~~d~~~l~~~~ 75 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNN-------ENLEKVK-EFATPLKVDASNFDKLVEVM 75 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCH-------HHHHHHT-TTSEEEECCTTCHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCH-------HHHHHHh-ccCCcEEEecCCHHHHHHHH
Confidence 379999999888777766532 13577777631 1122211 2222 222334688888
Q ss_pred cccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCC
Q 007703 408 KVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSN 448 (592)
Q Consensus 408 ~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSN 448 (592)
+. .|++|-+ .|.-|...++++-.+... =++-+|-
T Consensus 76 ~~--~DvVi~~--~p~~~~~~v~~~~~~~g~---~yvD~s~ 109 (365)
T 3abi_A 76 KE--FELVIGA--LPGFLGFKSIKAAIKSKV---DMVDVSF 109 (365)
T ss_dssp TT--CSEEEEC--CCGGGHHHHHHHHHHHTC---EEEECCC
T ss_pred hC--CCEEEEe--cCCcccchHHHHHHhcCc---ceEeeec
Confidence 75 7888854 455688899988765433 2555663
No 214
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=73.14 E-value=17 Score=36.36 Aligned_cols=34 Identities=26% Similarity=0.362 Sum_probs=27.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
..||.|+|+|..|.++|..+... |. ++++++|++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCC
Confidence 36899999999999999998764 53 478888874
No 215
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=72.99 E-value=1.8 Score=46.42 Aligned_cols=182 Identities=16% Similarity=0.204 Sum_probs=96.6
Q ss_pred cccccccCcchHHHHHhcCCCCCeeEEEEec--------------------CceecccCCCCCCccccchhhHHHHHH--
Q 007703 159 GLYISLKEKGKILEVLKNWPERSIQVIVVTD--------------------GERILGLGDLGCQGMGIPVGKLALYTA-- 216 (592)
Q Consensus 159 Glyis~~d~g~i~~~l~nwp~~~v~viVVTD--------------------G~rILGLGDlG~~GmgI~iGKl~LYta-- 216 (592)
|.|++..|-..|..+|+.. +++++++.| |+++=-+-++|-.-.-|.++....++|
T Consensus 177 G~~~~~~D~~eik~lL~~~---Gi~v~~~~d~s~~ld~~~~~~~~~~~~~gg~~~~ei~~~~~A~~ni~~~~~~~~~A~~ 253 (458)
T 3pdi_B 177 SANLTPGDLEYIAESIESF---GLRPLLIPDLSGSLDGHLDENRFNALTTGGLSVAELATAGQSVATLVVGQSLAGAADA 253 (458)
T ss_dssp CTTCCHHHHHHHHHHHHTT---TCEEEEESCHHHHSSSCCCSSCCTTCCSCSBCHHHHGGGSSCSCEEEESGGGHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHc---CCEEEEecCccccccCccccccccccCCCCCCHHHHHhhhhCcEEEEecHHHHHHHHH
Confidence 7777777777888888854 688888854 333434444443334444555443332
Q ss_pred ---hcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHHHHH
Q 007703 217 ---LGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELL 293 (592)
Q Consensus 217 ---~gGI~P~~~LPI~LDvGTnNe~LL~Dp~YlG~r~~R~~geeY~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~lL 293 (592)
=-|+. .+-+ |..+|+ +=.++|++++.+.+|- ..| +.+
T Consensus 254 Le~~~GiP---~~~~--------------~~p~G~-----------~~T~~~l~~la~~~g~----~~~--------~~i 293 (458)
T 3pdi_B 254 LAERTGVP---DRRF--------------GMLYGL-----------DAVDAWLMALAEISGN----PVP--------DRY 293 (458)
T ss_dssp HHHHSCCC---EEEE--------------CCSCHH-----------HHHHHHHHHHHHHHSS----CCC--------HHH
T ss_pred HHHHHCCC---EEec--------------CCCcCH-----------HHHHHHHHHHHHHHCC----chH--------HHH
Confidence 12443 2111 011121 1268888888888863 112 223
Q ss_pred HHHcCCCceeccCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEc
Q 007703 294 AKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373 (592)
Q Consensus 294 ~ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD 373 (592)
++.|.+ ++.++.-....|.+.|++|+|.+.-..|+++.|.+ .|+.. +.++-
T Consensus 294 ~~er~r------------------~~~~~~d~~~~l~Gkrv~i~~~~~~~~~l~~~L~e-----lGm~v------v~~~~ 344 (458)
T 3pdi_B 294 KRQRAQ------------------LQDAMLDTHFMLSSARTAIAADPDLLLGFDALLRS-----MGAHT------VAAVV 344 (458)
T ss_dssp HHHHHH------------------HHHHHHHHHHHHTTCEEEEECCHHHHHHHHHHHHT-----TTCEE------EEEEE
T ss_pred HHHHHH------------------HHHHHHHHHHhcCCCEEEEECCcHHHHHHHHHHHH-----CCCEE------EEEEE
Confidence 333321 12222222245778999999999999999998843 48732 22221
Q ss_pred cCCcccCCCccCCchhchhhccc-cCCCCCHHHHhcccCCcEEEeccC
Q 007703 374 SKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSSG 420 (592)
Q Consensus 374 ~~GLv~~~R~~~l~~~k~~fA~~-~~~~~~L~e~V~~vkPtvLIG~S~ 420 (592)
.. ..+.+... +...- ..+...|++.++..+||.+||-|-
T Consensus 345 ~~------~~~~~~~~--~~~~v~~~D~~~le~~i~~~~pDllig~~~ 384 (458)
T 3pdi_B 345 PA------RAAALVDS--PLPSVRVGDLEDLEHAARAGQAQLVIGNSH 384 (458)
T ss_dssp SS------CCSCCTTT--TSSCEEESHHHHHHHHHHHHTCSEEEECTT
T ss_pred CC------CChhhhhC--ccCcEEeCCHHHHHHHHHhcCCCEEEEChh
Confidence 11 11111110 00000 011124777888999999999654
No 216
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=72.79 E-value=2.3 Score=41.54 Aligned_cols=32 Identities=16% Similarity=0.296 Sum_probs=25.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.||.|+|+|..|..+|..+.. .| .+++++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~-----~g-------~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLK-----AG-------YSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-----TT-------CEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHh-----CC-------CEEEEEeCC
Confidence 489999999999999988864 25 257888764
No 217
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=72.36 E-value=7 Score=38.49 Aligned_cols=103 Identities=17% Similarity=0.164 Sum_probs=60.1
Q ss_pred CCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCc---cCCchhchhhc-cccCCCC
Q 007703 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK---DSLQHFKKPWA-HEHEPVN 401 (592)
Q Consensus 327 ~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~---~~l~~~k~~fA-~~~~~~~ 401 (592)
.++++.+|+|.|| |-.|..+++.|++ .| .+++++|+.. .... ..+. ...+. -+-....
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~l~--~v~~~~~Dl~d~~ 78 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLP-----QG-------HEILVIDNFA---TGKREVLPPVA--GLSVIEGSVTDAG 78 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGG-----GT-------CEEEEEECCS---SSCGGGSCSCT--TEEEEECCTTCHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhhhccC--CceEEEeeCCCHH
Confidence 4678889999998 7777777766643 25 4688888741 0100 1110 11111 1212223
Q ss_pred CHHHHhcccCCcEEEeccCCCCC-C------------CHHHHHHHHccCCCCceEEecC
Q 007703 402 NLLDAVKVIKPTILIGSSGVGRT-F------------TKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 402 ~L~e~V~~vkPtvLIG~S~~~g~-F------------t~evv~~Ma~~~e~rPIIFaLS 447 (592)
++.++++.+++|++|=+.+.... - +..+++++.+..- +.|||.=|
T Consensus 79 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~-~~iV~~SS 136 (330)
T 2pzm_A 79 LLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGV-KRLLNFQT 136 (330)
T ss_dssp HHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTC-SEEEEEEE
T ss_pred HHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCC-CEEEEecC
Confidence 57777876679999988775532 0 3456777766555 67888544
No 218
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=71.87 E-value=3.3 Score=41.17 Aligned_cols=32 Identities=22% Similarity=0.306 Sum_probs=24.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
-||+|+|||.||+-.|-.|.+ .|+ ++.++|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~-----~G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK-----HGI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 489999999999999988765 375 46667653
No 219
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=71.71 E-value=3.4 Score=40.77 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=28.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
..+|+|+|||.||+..|..+.+ .|. .++.++|++.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 5689999999999999998854 253 2799999874
No 220
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=71.35 E-value=6.7 Score=39.58 Aligned_cols=102 Identities=20% Similarity=0.294 Sum_probs=61.0
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc--CC-cccCCCccCCchhchhhc-cccC---CCCCHH
Q 007703 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KG-LIVSSRKDSLQHFKKPWA-HEHE---PVNNLL 404 (592)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~--~G-Lv~~~R~~~l~~~k~~fA-~~~~---~~~~L~ 404 (592)
||+|.|| |..|..++..|+. .|+ ...++|+|. +- .+..... +|.+.. ++. .+.. ...++.
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~-dl~~~~-~~~~~~~~i~~~~d~l~ 69 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPF-----MKDLVLIGREHSINKLEGLRE-DIYDAL-AGTRSDANIYVESDENL 69 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTT-----CCEEEEEECGGGHHHHHHHHH-HHHHHH-TTSCCCCEEEEEETTCG
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCC-----CCEEEEEcCCCchhhhHHHHH-HHHHhH-HhcCCCeEEEeCCcchH
Confidence 8999999 9999998887753 254 256899996 21 0000000 022111 222 1100 001367
Q ss_pred HHhcccCCcEEEeccCCCC---C-----------CCHHHHHHHHccCCCCceEEecCCCC
Q 007703 405 DAVKVIKPTILIGSSGVGR---T-----------FTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 405 e~V~~vkPtvLIG~S~~~g---~-----------Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
++++. .|++|=+.+.+. . .+++++++|.+++ +.+|+--|||.
T Consensus 70 ~al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~SNPv 125 (313)
T 1hye_A 70 RIIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFVITNPV 125 (313)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEECSSSH
T ss_pred HHhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecCcH
Confidence 88886 898886666542 1 2567888888777 56888889998
No 221
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=71.03 E-value=2.5 Score=39.11 Aligned_cols=94 Identities=14% Similarity=0.137 Sum_probs=53.9
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchh-----chhhc-cccCCCCCHH
Q 007703 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-----KKPWA-HEHEPVNNLL 404 (592)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~-----k~~fA-~~~~~~~~L~ 404 (592)
++|+|.|| |-.|..+++.|++. .| .++++++++. + ..+... +..+. -|-.+..++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~----~g-------~~V~~~~r~~----~--~~~~~~~~~~~~~~~~~~D~~d~~~~~ 68 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTY----TD-------MHITLYGRQL----K--TRIPPEIIDHERVTVIEGSFQNPGXLE 68 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHH----CC-------CEEEEEESSH----H--HHSCHHHHTSTTEEEEECCTTCHHHHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhc----CC-------ceEEEEecCc----c--ccchhhccCCCceEEEECCCCCHHHHH
Confidence 35999996 77777777777621 35 3688887751 1 012211 00111 1212224577
Q ss_pred HHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEe
Q 007703 405 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILA 445 (592)
Q Consensus 405 e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFa 445 (592)
++++ +.|++|=+.+..+.-++.+++.|.+..- +-||+.
T Consensus 69 ~~~~--~~d~vv~~ag~~n~~~~~~~~~~~~~~~-~~iv~i 106 (221)
T 3r6d_A 69 QAVT--NAEVVFVGAMESGSDMASIVKALSRXNI-RRVIGV 106 (221)
T ss_dssp HHHT--TCSEEEESCCCCHHHHHHHHHHHHHTTC-CEEEEE
T ss_pred HHHc--CCCEEEEcCCCCChhHHHHHHHHHhcCC-CeEEEE
Confidence 7787 4899997776543237788888876544 456654
No 222
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=70.25 E-value=3.2 Score=46.86 Aligned_cols=37 Identities=30% Similarity=0.429 Sum_probs=33.1
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.|++.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 14 kL~~s~VlVVGaGGLGsevak~La~a-----GV------G~ItlvD~D 50 (640)
T 1y8q_B 14 AVAGGRVLVVGAGGIGCELLKNLVLT-----GF------SHIDLIDLD 50 (640)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEECC
T ss_pred HHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 47789999999999999999999875 87 699999987
No 223
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=70.00 E-value=5.4 Score=40.61 Aligned_cols=104 Identities=20% Similarity=0.263 Sum_probs=63.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCC--CCHHHHhccc
Q 007703 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVI 410 (592)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~--~~L~e~V~~v 410 (592)
||.|+|||..|..+|-+|+.. |+ -..+.|+|.+-=...+-.-+|.+- .+|....... .+-.++++.
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~G~a~DL~h~-~~~~~~~~~i~~~~d~~~~~~- 69 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHA-AAGIDKYPKIVGGADYSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHH-HGGGTCCCEEEEESCGGGGTT-
T ss_pred EEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCCCcchhhhhhhhcc-cccCCCCCeEecCCCHHHhCC-
Confidence 799999999999998887652 54 256999997521111100013221 1222111100 122356665
Q ss_pred CCcEEEeccCCC---CC-----C------CHHHHHHHHccCCCCceEEecCCCC
Q 007703 411 KPTILIGSSGVG---RT-----F------TKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 411 kPtvLIG~S~~~---g~-----F------t~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
.|++|=+.+.+ |- | -+++++++++++. ..||+-.|||.
T Consensus 70 -aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p-~aivlvvsNPv 121 (294)
T 2x0j_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAP-ESKILVVTNPM 121 (294)
T ss_dssp -CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTST-TCEEEECSSSH
T ss_pred -CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEecCcc
Confidence 89888555544 31 1 1467788889999 99999999997
No 224
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=69.83 E-value=9.4 Score=37.51 Aligned_cols=97 Identities=15% Similarity=0.180 Sum_probs=57.2
Q ss_pred CCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHH
Q 007703 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (592)
Q Consensus 327 ~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e 405 (592)
++++..+|+|.|| |-.|..+++.|++ .| .+++.+|+.. .. ..+... .-+-....++.+
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~~-~~~~~~----~~Dl~d~~~~~~ 73 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRT-----QG-------RTVRGFDLRP----SG-TGGEEV----VGSLEDGQALSD 73 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEEESSC----CS-SCCSEE----ESCTTCHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHh-----CC-------CEEEEEeCCC----CC-CCccEE----ecCcCCHHHHHH
Confidence 4577889999998 8888888877764 25 3677787742 11 111111 112222245777
Q ss_pred HhcccCCcEEEeccCCCCCC--------------CHHHHHHHHccCCCCceEEecC
Q 007703 406 AVKVIKPTILIGSSGVGRTF--------------TKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 406 ~V~~vkPtvLIG~S~~~g~F--------------t~evv~~Ma~~~e~rPIIFaLS 447 (592)
+++ ++|++|=+.+....- |..+++++.+..- +.|||.=|
T Consensus 74 ~~~--~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~V~~SS 126 (347)
T 4id9_A 74 AIM--GVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGV-RRFVFASS 126 (347)
T ss_dssp HHT--TCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTC-SEEEEEEE
T ss_pred HHh--CCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCC-CeEEEECC
Confidence 887 699999877654311 3457888887666 78888655
No 225
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=69.28 E-value=5.7 Score=36.57 Aligned_cols=96 Identities=10% Similarity=0.139 Sum_probs=52.4
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 007703 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (592)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 410 (592)
.||+|.|| |-.|..+++.|++ .| .++++++++. ++...+...-..+.-+-.+..++.++++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 67 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN-----RG-------FEVTAVVRHP----EKIKIENEHLKVKKADVSSLDEVCEVCKG- 67 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT-----TT-------CEEEEECSCG----GGCCCCCTTEEEECCCTTCHHHHHHHHTT-
T ss_pred CEEEEEcCCchHHHHHHHHHHH-----CC-------CEEEEEEcCc----ccchhccCceEEEEecCCCHHHHHHHhcC-
Confidence 58999996 6666666665543 25 4788888852 11111211111111122222457788874
Q ss_pred CCcEEEeccCCCC----------CCCHHHHHHHHccCCCCceEEec
Q 007703 411 KPTILIGSSGVGR----------TFTKEVIEAMASFNEVKPLILAL 446 (592)
Q Consensus 411 kPtvLIG~S~~~g----------~Ft~evv~~Ma~~~e~rPIIFaL 446 (592)
+|++|=+.+... ..+..++++|.+..- +.+||.=
T Consensus 68 -~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~~S 111 (227)
T 3dhn_A 68 -ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGV-NRFLMVG 111 (227)
T ss_dssp -CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTC-SEEEEEC
T ss_pred -CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCC-CEEEEeC
Confidence 899997765431 124556777776554 5566643
No 226
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=69.25 E-value=2.3 Score=37.35 Aligned_cols=32 Identities=16% Similarity=0.407 Sum_probs=26.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~-----~g-------~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLA-----SD-------IPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 479999999999999998865 25 468889874
No 227
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=69.02 E-value=2.3 Score=43.96 Aligned_cols=108 Identities=18% Similarity=0.255 Sum_probs=65.0
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcccc--CCCCCHHH
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLD 405 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~--~~~~~L~e 405 (592)
+....||.|+|||..|.++|-.++.. |+ ...+.|+|.+-=..++-.-+|.+. ..|.... ....+. +
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~~~d~-~ 83 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMK-----DL-----ADELALVDVIEDKLKGEMMDLQHG-SLFLKTPKIVSSKDY-S 83 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGCSCCEEEECSSG-G
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEeCChHHHHHHHHhhhhh-hhccCCCeEEEcCCH-H
Confidence 34567999999999999999888652 54 257999997410000000012211 1232110 011344 3
Q ss_pred HhcccCCcEEEeccCC---CC-----CC------CHHHHHHHHccCCCCceEEecCCCC
Q 007703 406 AVKVIKPTILIGSSGV---GR-----TF------TKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 406 ~V~~vkPtvLIG~S~~---~g-----~F------t~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
+++. .|++|=+.+. +| +| -+++.+.|++++. .-+|+-.|||.
T Consensus 84 ~~~~--aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p-~a~vlvvtNPv 139 (331)
T 4aj2_A 84 VTAN--SKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPV 139 (331)
T ss_dssp GGTT--EEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCT-TCEEEECSSSH
T ss_pred HhCC--CCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCC-CeEEEEecChH
Confidence 5665 8888744433 33 12 2467788889999 99999999998
No 228
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=69.02 E-value=3.8 Score=39.76 Aligned_cols=34 Identities=12% Similarity=0.341 Sum_probs=27.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
..+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 4689999999999999998864 353 688999864
No 229
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=68.75 E-value=13 Score=36.10 Aligned_cols=79 Identities=14% Similarity=0.193 Sum_probs=43.9
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHH
Q 007703 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (592)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e 405 (592)
..+++++++||.||++ ||...++..+.+ .| .+++++|++.- .+......+.-|-....++.+
T Consensus 9 ~~~~~~k~vlVTGas~---GIG~aia~~l~~-~G-------~~V~~~~r~~~-------~~~~~~~~~~~Dv~~~~~v~~ 70 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSS---GIGLAVVDALVR-YG-------AKVVSVSLDEK-------SDVNVSDHFKIDVTNEEEVKE 70 (269)
T ss_dssp -CTTTTCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEEEESCC---------CTTSSEEEECCTTCHHHHHH
T ss_pred ccCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCch-------hccCceeEEEecCCCHHHHHH
Confidence 4578899999999864 444455555554 36 36888876421 111111112112222234555
Q ss_pred Hhccc-----CCcEEEeccCCC
Q 007703 406 AVKVI-----KPTILIGSSGVG 422 (592)
Q Consensus 406 ~V~~v-----kPtvLIG~S~~~ 422 (592)
+++.+ ++|+||=..+..
T Consensus 71 ~~~~~~~~~g~iD~lv~nAg~~ 92 (269)
T 3vtz_A 71 AVEKTTKKYGRIDILVNNAGIE 92 (269)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCcC
Confidence 56555 899999776653
No 230
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=68.46 E-value=13 Score=36.16 Aligned_cols=93 Identities=12% Similarity=0.193 Sum_probs=57.5
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 007703 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (592)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~ 409 (592)
.||+|.|| |-.|..+++.|++ .| .+++.+++. .+... +. ...+.. +-. ..++.++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~----~~~~~-~~--~~~~~~~Dl~-~~~~~~~~~- 61 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKN-----DG-------NTPIILTRS----IGNKA-IN--DYEYRVSDYT-LEDLINQLN- 61 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESC----CC--------CCEEEECCCC-HHHHHHHTT-
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCC----CCccc-CC--ceEEEEcccc-HHHHHHhhc-
Confidence 58999995 8888888877764 25 368888875 22111 22 111111 222 345677777
Q ss_pred cCCcEEEeccCCCCC------------CCHHHHHHHHccCCCCceEEecC
Q 007703 410 IKPTILIGSSGVGRT------------FTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 410 vkPtvLIG~S~~~g~------------Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
++|++|=+.+..+. -|..+++++.+..- +-+||.=|
T Consensus 62 -~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-~r~v~~SS 109 (311)
T 3m2p_A 62 -DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNI-SNIVYAST 109 (311)
T ss_dssp -TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTC-CEEEEEEE
T ss_pred -CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCC-CEEEEEcc
Confidence 69999988775432 14678888887665 67888544
No 231
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=68.21 E-value=4.6 Score=38.28 Aligned_cols=32 Identities=28% Similarity=0.412 Sum_probs=26.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.+|+|+|||.||+..|..|.. .| .++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGR-----AR-------KNILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEeCC
Confidence 589999999999999988865 25 368899974
No 232
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=68.17 E-value=2.5 Score=43.91 Aligned_cols=120 Identities=21% Similarity=0.205 Sum_probs=65.4
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhc---cccCCCCCHHHH
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---HEHEPVNNLLDA 406 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA---~~~~~~~~L~e~ 406 (592)
.+.||+|+|||-+|-.+|+.|++. .++.++|++ .++ +......+. -+.....+|.++
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-------------~~V~V~~R~----~~~---a~~la~~~~~~~~d~~~~~~l~~l 74 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-------------FDVYIGDVN----NEN---LEKVKEFATPLKVDASNFDKLVEV 74 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-------------SEEEEEESC----HHH---HHHHTTTSEEEECCTTCHHHHHHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-------------CeEEEEECC----HHH---HHHHHhhCCeEEEecCCHHHHHHH
Confidence 357999999999999998877531 357788774 111 222111111 011122468888
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCcc
Q 007703 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPF 479 (592)
Q Consensus 407 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~~aEct~e~A~~wt~G~aifAsGSPF~pV 479 (592)
++. +|++|=+.. . .+..+++++-.+. .=.++-+|.-...++.-.++|-+ .|. .+..|+=|+|-
T Consensus 75 l~~--~DvVIn~~P-~-~~~~~v~~a~l~~---G~~~vD~s~~~~~~~~l~~~Ak~--aG~-~~l~g~G~dPG 137 (365)
T 2z2v_A 75 MKE--FELVIGALP-G-FLGFKSIKAAIKS---KVDMVDVSFMPENPLELRDEAEK--AQV-TIVFDAGFAPG 137 (365)
T ss_dssp HTT--CSCEEECCC-H-HHHHHHHHHHHHT---TCCEEECCCCSSCGGGGHHHHHH--TTC-EEECSCBTTTB
T ss_pred HhC--CCEEEECCC-h-hhhHHHHHHHHHh---CCeEEEccCCcHHHHHHHHHHHH--cCC-EEEECCCCcch
Confidence 875 899997632 2 3566776654432 33466777622112122334432 453 34455556664
No 233
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=67.69 E-value=6.9 Score=39.77 Aligned_cols=40 Identities=23% Similarity=0.380 Sum_probs=25.8
Q ss_pred HHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCC
Q 007703 404 LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSN 448 (592)
Q Consensus 404 ~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSN 448 (592)
...++..|||++||..+.. --.....|+... .|+|.=-+|
T Consensus 85 ~~~l~~~~PDvVi~~g~~~----s~p~~laA~~~~-iP~vihe~n 124 (365)
T 3s2u_A 85 LRVIRQLRPVCVLGLGGYV----TGPGGLAARLNG-VPLVIHEQN 124 (365)
T ss_dssp HHHHHHHCCSEEEECSSST----HHHHHHHHHHTT-CCEEEEECS
T ss_pred HHHHHhcCCCEEEEcCCcc----hHHHHHHHHHcC-CCEEEEecc
Confidence 4567888999999986643 111222345556 899976555
No 234
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=67.43 E-value=5.7 Score=33.53 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=25.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+.+|+|+|+|..|..+|+.+.. .| .+++++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~-----~g-------~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE-----KG-------HDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 3589999999999999888754 25 468888874
No 235
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=66.93 E-value=5.9 Score=39.92 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=26.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.||.|+|+|..|.++|..+... |. .+++++|++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 5899999999999999988653 51 468888875
No 236
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=66.92 E-value=2.5 Score=43.87 Aligned_cols=106 Identities=12% Similarity=0.100 Sum_probs=63.7
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcccc--CCCCCHHHHh
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAV 407 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~--~~~~~L~e~V 407 (592)
...||.|+|||..|.++|..++.. |+ -..+.|+|.+-=..++-.-+|.+. .+|.... ....++.+ +
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~-----g~-----~~ev~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~t~d~~~-~ 87 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMK-----DL-----ADEVALVDVMEDKLKGEMMDLEHG-SLFLHTAKIVSGKDYSV-S 87 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHH-----CC-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSCCSEEEEESSSCS-C
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECCHHHHHHHHHHhhhh-hhcccCCeEEEcCCHHH-h
Confidence 347999999999999999988753 65 247999997310000000012211 2332211 01134433 5
Q ss_pred cccCCcEEE---eccCCCC-----CC------CHHHHHHHHccCCCCceEEecCCCC
Q 007703 408 KVIKPTILI---GSSGVGR-----TF------TKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 408 ~~vkPtvLI---G~S~~~g-----~F------t~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
++ .|++| |....+| +| -+++++.+.+++. .-+|+-.|||.
T Consensus 88 ~d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P-~a~ilvvtNPv 141 (330)
T 3ldh_A 88 AG--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSP-DCLKELHPELG 141 (330)
T ss_dssp SS--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCT-TCEEEECSSSH
T ss_pred CC--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCC-CceEEeCCCcc
Confidence 54 88888 3333333 12 2467778888999 99999999997
No 237
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=66.77 E-value=5.9 Score=32.41 Aligned_cols=83 Identities=17% Similarity=0.215 Sum_probs=49.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhch---hhcc-ccCCCCCHHHH
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK---PWAH-EHEPVNNLLDA 406 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~---~fA~-~~~~~~~L~e~ 406 (592)
..+|+|+|+|..|..+++.+.. .|. .+++++|++. . .+...+. .+.. +.....++.++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~-----~g~------~~v~~~~r~~----~---~~~~~~~~~~~~~~~d~~~~~~~~~~ 66 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKT-----SSN------YSVTVADHDL----A---ALAVLNRMGVATKQVDAKDEAGLAKA 66 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----CSS------EEEEEEESCH----H---HHHHHHTTTCEEEECCTTCHHHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHh-----CCC------ceEEEEeCCH----H---HHHHHHhCCCcEEEecCCCHHHHHHH
Confidence 5689999999999998887764 252 4688888741 1 1111110 0100 11111346666
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHc
Q 007703 407 VKVIKPTILIGSSGVGRTFTKEVIEAMAS 435 (592)
Q Consensus 407 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~ 435 (592)
++ ++|++|=+. +..++..+++.+.+
T Consensus 67 ~~--~~d~vi~~~--~~~~~~~~~~~~~~ 91 (118)
T 3ic5_A 67 LG--GFDAVISAA--PFFLTPIIAKAAKA 91 (118)
T ss_dssp TT--TCSEEEECS--CGGGHHHHHHHHHH
T ss_pred Hc--CCCEEEECC--CchhhHHHHHHHHH
Confidence 65 589988665 33467777777665
No 238
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=66.55 E-value=5 Score=39.11 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
..+|+|+|||.||+..|..+.. .| .++.++|++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM-----RG-------LSFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEeCCC
Confidence 4689999999999999987754 25 3688999863
No 239
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=66.47 E-value=5.2 Score=38.30 Aligned_cols=33 Identities=21% Similarity=0.251 Sum_probs=27.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
..+|+|+|||.||+..|..+.+ .|. ++.++|++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSAR-----YML-------KTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHH-----CCC-------cEEEEecc
Confidence 4699999999999999988765 253 58999997
No 240
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=66.46 E-value=4 Score=42.45 Aligned_cols=34 Identities=21% Similarity=0.308 Sum_probs=26.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+||||+|+|.||+..|..|... +- .-+|.|+|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MP-----DLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CT-----TCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----Cc-----CCeEEEEcCC
Confidence 4799999999999999988653 21 1367888875
No 241
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=66.20 E-value=8.5 Score=37.36 Aligned_cols=79 Identities=14% Similarity=0.164 Sum_probs=43.4
Q ss_pred CcccceEEEeCcC-h--HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc------ccC
Q 007703 328 TLAEHRFLFLGAG-E--AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH------EHE 398 (592)
Q Consensus 328 ~l~d~riv~~GAG-s--Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~------~~~ 398 (592)
.+++.++||.||. . .|..||+.+++ .| -+++++|++-+ .+.+...+..+.+ |-.
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G-------~~V~~~~r~~~-----~~~~~~l~~~~~~~~~~~~Dl~ 85 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHR-----EG-------AELAFTYVGQF-----KDRVEKLCAEFNPAAVLPCDVI 85 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHH-----TT-------CEEEEEECTTC-----HHHHHHHHGGGCCSEEEECCTT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHH-----cC-------CEEEEeeCchH-----HHHHHHHHHhcCCceEEEeecC
Confidence 4778899999984 3 45555555543 36 36888888641 0112222111111 111
Q ss_pred CCCCHHHHhccc-----CCcEEEeccCCCC
Q 007703 399 PVNNLLDAVKVI-----KPTILIGSSGVGR 423 (592)
Q Consensus 399 ~~~~L~e~V~~v-----kPtvLIG~S~~~g 423 (592)
...++.++++.+ ++|+||=..+...
T Consensus 86 ~~~~v~~~~~~~~~~~g~id~li~nAg~~~ 115 (280)
T 3nrc_A 86 SDQEIKDLFVELGKVWDGLDAIVHSIAFAP 115 (280)
T ss_dssp CHHHHHHHHHHHHHHCSSCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccCC
Confidence 223455555554 7999998777653
No 242
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=66.03 E-value=16 Score=37.71 Aligned_cols=84 Identities=24% Similarity=0.351 Sum_probs=65.8
Q ss_pred hHHHHHHHHHHHHHHhCCCcccceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCch
Q 007703 310 TASVVLAGVVAALKLIGGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (592)
Q Consensus 310 TaaV~LAgll~Alr~~g~~l~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~ 388 (592)
-.-+|-.|++--|+..+.+|+..++|++|.+ --|.-+|-||.. .|. .+.++.|+
T Consensus 158 ~~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~-----~~A-------TVTi~Hs~------------- 212 (303)
T 4b4u_A 158 YGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQ-----ANA-------TVTICHSR------------- 212 (303)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHH-----TTC-------EEEEECTT-------------
T ss_pred ccCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHh-----cCC-------EEEEecCC-------------
Confidence 3456778999999999999999999999975 568888877754 242 35555432
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHH
Q 007703 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIE 431 (592)
Q Consensus 389 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~ 431 (592)
.++|.+.+++ +|+||...|.++.++.++|+
T Consensus 213 -----------T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk 242 (303)
T 4b4u_A 213 -----------TQNLPELVKQ--ADIIVGAVGKAELIQKDWIK 242 (303)
T ss_dssp -----------CSSHHHHHHT--CSEEEECSCSTTCBCGGGSC
T ss_pred -----------CCCHHHHhhc--CCeEEeccCCCCcccccccc
Confidence 1357888886 99999999999999999886
No 243
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=65.87 E-value=15 Score=34.07 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=53.5
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhc-cccCCCCCHHHH
Q 007703 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-HEHEPVNNLLDA 406 (592)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA-~~~~~~~~L~e~ 406 (592)
+++.+++|.|| |-.|..+++.|++. |. ..+++++|++. ++.+.+......+. -|-.+..++.++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~-----G~-----~~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~ 81 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQ-----GL-----FSKVTLIGRRK----LTFDEEAYKNVNQEVVDFEKLDDYASA 81 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHH-----TC-----CSEEEEEESSC----CCCCSGGGGGCEEEECCGGGGGGGGGG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcC-----CC-----CCEEEEEEcCC----CCccccccCCceEEecCcCCHHHHHHH
Confidence 44678999996 66666677666542 52 12788888752 11111111111111 121222356666
Q ss_pred hcccCCcEEEeccCCCCC-------------CCHHHHHHHHccCCCCceEEecC
Q 007703 407 VKVIKPTILIGSSGVGRT-------------FTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 407 V~~vkPtvLIG~S~~~g~-------------Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
++ ++|++|=+.+.... -+..++++|.+... +-|||.=|
T Consensus 82 ~~--~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~iv~~SS 132 (242)
T 2bka_A 82 FQ--GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGC-KHFNLLSS 132 (242)
T ss_dssp GS--SCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTC-CEEEEECC
T ss_pred hc--CCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCC-CEEEEEcc
Confidence 66 58999988775310 13455666665444 45665433
No 244
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=65.59 E-value=5.5 Score=38.37 Aligned_cols=33 Identities=15% Similarity=0.196 Sum_probs=26.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
..+|||+|||.||+..|..+.. .| .++.++|+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 39 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM-----RQ-------ASVKIIESL 39 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSS
T ss_pred cceEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEEcC
Confidence 3589999999999999987764 25 368899886
No 245
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=65.56 E-value=5.5 Score=38.50 Aligned_cols=30 Identities=20% Similarity=0.376 Sum_probs=23.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
||.|+|+|..|..+|..+. + |. +++++|+.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~-----~-g~-------~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLA-----R-RF-------PTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHH-----T-TS-------CEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHh-----C-CC-------eEEEEeCC
Confidence 7999999999999998774 2 42 57778763
No 246
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=65.50 E-value=5.1 Score=39.35 Aligned_cols=31 Identities=23% Similarity=0.390 Sum_probs=24.1
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
-|+|+|||.||+-.|..|.+ .|+ ++.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~-----~G~-------~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 38999999999999988765 375 46677764
No 247
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=68.81 E-value=1.3 Score=42.02 Aligned_cols=92 Identities=11% Similarity=0.081 Sum_probs=53.3
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhc
Q 007703 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 408 (592)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~ 408 (592)
+.+.||.|+|+|..|..+|..+... | .+++++|+.-- . +.+ +...-...++.|+++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~-----G-------~~V~~~~r~~~----~-~~~-------~~~g~~~~~~~~~~~ 72 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQC-----G-------YSVVFGSRNPQ----V-SSL-------LPRGAEVLCYSEAAS 72 (201)
Confidence 4567899999999999999887643 4 24677776421 1 111 111111125566665
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCC
Q 007703 409 VIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 409 ~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
. .|++| ++..+. -+++++ .++...+ ..+|.-+||..
T Consensus 73 ~--aDvVi-lav~~~-~~~~v~-~l~~~~~-~~ivI~~~~G~ 108 (201)
T 2yjz_A 73 R--SDVIV-LAVHRE-HYDFLA-ELADSLK-GRVLIDVSNNQ 108 (201)
Confidence 4 67666 333332 355665 2333334 56888899876
No 248
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=65.16 E-value=10 Score=36.23 Aligned_cols=30 Identities=20% Similarity=0.281 Sum_probs=23.8
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc
Q 007703 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (592)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (592)
||.|+|+|..|..+|..+... |. +++++|+
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~-----g~-------~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSR-----GV-------EVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----TC-------EEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHC-----CC-------eEEEeCC
Confidence 789999999999999988652 53 5776665
No 249
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=65.16 E-value=11 Score=36.56 Aligned_cols=77 Identities=16% Similarity=0.278 Sum_probs=44.5
Q ss_pred ccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCcc--CCchh----chhhcc-ccCCCC
Q 007703 330 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD--SLQHF----KKPWAH-EHEPVN 401 (592)
Q Consensus 330 ~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~--~l~~~----k~~fA~-~~~~~~ 401 (592)
++.+|+|.|| |-.|..+++.|++ .| .+++.+|++. ...+ .+... +..+.. |-.+..
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 65 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLE-----KG-------YEVYGADRRS----GEFASWRLKELGIENDVKIIHMDLLEFS 65 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECSCC----STTTTHHHHHTTCTTTEEECCCCTTCHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CC-------CEEEEEECCC----cccccccHhhccccCceeEEECCCCCHH
Confidence 4578999998 7777777776654 25 4688887742 1100 01000 011111 111223
Q ss_pred CHHHHhcccCCcEEEeccCCC
Q 007703 402 NLLDAVKVIKPTILIGSSGVG 422 (592)
Q Consensus 402 ~L~e~V~~vkPtvLIG~S~~~ 422 (592)
++.++++.+++|++|=+.+..
T Consensus 66 ~~~~~~~~~~~d~vih~A~~~ 86 (345)
T 2z1m_A 66 NIIRTIEKVQPDEVYNLAAQS 86 (345)
T ss_dssp HHHHHHHHHCCSEEEECCCCC
T ss_pred HHHHHHHhcCCCEEEECCCCc
Confidence 577888888899999888754
No 250
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=65.14 E-value=16 Score=36.29 Aligned_cols=32 Identities=22% Similarity=0.451 Sum_probs=25.5
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.||.|+| +|..|..+|..+.. .|. +++++|++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~-----~G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRA-----SGY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHT-----TTC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 5899999 99999999998864 253 68888764
No 251
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=65.04 E-value=5.6 Score=40.71 Aligned_cols=36 Identities=31% Similarity=0.476 Sum_probs=28.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCc
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (592)
++|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~ 37 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQ-----AKYP-----GRIALINDEKH 37 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEECCSSS
T ss_pred CCEEEEcChHHHHHHHHHHHh-----hCcC-----CCEEEEeCCCC
Confidence 589999999999999998865 3642 37999998753
No 252
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=64.98 E-value=5.7 Score=39.97 Aligned_cols=38 Identities=18% Similarity=0.080 Sum_probs=27.8
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCc
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (592)
+.+..+|+|+|||.||+..|..|.+ .|+ ++.++|+.-.
T Consensus 8 ~m~~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~v~viE~~~~ 45 (379)
T 3alj_A 8 PGKTRRAEVAGGGFAGLTAAIALKQ-----NGW-------DVRLHEKSSE 45 (379)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecCCC
Confidence 3456799999999999999988765 363 6788887543
No 253
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=64.62 E-value=6.1 Score=34.11 Aligned_cols=34 Identities=24% Similarity=0.488 Sum_probs=26.6
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
...+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~-----~g-------~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTA-----AG-------KKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEECC
Confidence 34689999999999999988865 25 368888874
No 254
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=64.46 E-value=6.8 Score=37.59 Aligned_cols=86 Identities=12% Similarity=0.253 Sum_probs=53.1
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 007703 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (592)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 411 (592)
||+|.|| |-.|..+++.|+ . | .+++.+|++.-... .| + ....++.++++..+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-----g-------~~V~~~~r~~~~~~--~D-~-----------~d~~~~~~~~~~~~ 54 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-----V-------GNLIALDVHSKEFC--GD-F-----------SNPKGVAETVRKLR 54 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-----T-------SEEEEECTTCSSSC--CC-T-----------TCHHHHHHHHHHHC
T ss_pred eEEEECCCCHHHHHHHHHhh-c-----C-------CeEEEecccccccc--cc-C-----------CCHHHHHHHHHhcC
Confidence 7899998 877777777664 2 4 46888877531110 01 1 11135777888778
Q ss_pred CcEEEeccCCCCC----------------CCHHHHHHHHccCCCCceEEecC
Q 007703 412 PTILIGSSGVGRT----------------FTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 412 PtvLIG~S~~~g~----------------Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
+|++|=+.+.... .+..+++++.+..- | +||.=|
T Consensus 55 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~-~v~~SS 104 (299)
T 1n2s_A 55 PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-W-VVHYST 104 (299)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-E-EEEEEE
T ss_pred CCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-c-EEEEec
Confidence 9999988875431 14566676665443 4 777544
No 255
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=64.17 E-value=5 Score=38.77 Aligned_cols=33 Identities=21% Similarity=0.296 Sum_probs=27.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
..+|+|+|||.||+..|..|.+ .|+ ++.++|+.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLAR-----AEI-------KPILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 4689999999999999988865 253 58889884
No 256
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=64.11 E-value=6.7 Score=34.99 Aligned_cols=32 Identities=22% Similarity=0.390 Sum_probs=26.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
-+++|+|+|.+|+-.|..+.+ .| .++.++|+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~-----~g-------~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLAR-----AG-------LKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHH-----CC-------CcEEEEeCC
Confidence 379999999999999988765 25 478889875
No 257
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=64.09 E-value=6.4 Score=40.61 Aligned_cols=37 Identities=27% Similarity=0.434 Sum_probs=28.1
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcc
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv 378 (592)
+.-||||+|||.||+..|..|. ..| .+|.++|+.--+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~-----~~~-------~~itlie~~~~~ 44 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAAL-----GKC-------DDITMINSEKYL 44 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHT-----TTC-------SCEEEECSSSSC
T ss_pred CCCCEEEEcCcHHHHHHHHHHh-----CCC-------CEEEEEECCCCC
Confidence 3458999999999999999881 123 579999886443
No 258
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=64.09 E-value=17 Score=39.49 Aligned_cols=120 Identities=19% Similarity=0.127 Sum_probs=75.6
Q ss_pred CCCceeccCCc---chHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHH
Q 007703 298 TTHLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (592)
Q Consensus 298 ~~~~~FNDDiQ---GTaaV~LAgll~Alr~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (592)
..+.+.|---- .+|=-+++-+|+..|. .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 88 ~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~---- 163 (529)
T 1ygy_A 88 RGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAA---- 163 (529)
T ss_dssp TTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHT----
T ss_pred CCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHh----
Confidence 34555554322 3455578888887653 2467899999999999999999998754
Q ss_pred hcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHH
Q 007703 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 432 (592)
Q Consensus 357 ~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~ 432 (592)
.|+ +++.+|+.- .+ ...+ ...-...+|.|+++. .|+++=+. ...++++++.+..
T Consensus 164 -~G~-------~V~~~d~~~----~~----~~a~----~~g~~~~~l~e~~~~--aDvV~l~~P~~~~t~~~i~~~~~~~ 221 (529)
T 1ygy_A 164 -FGA-------YVVAYDPYV----SP----ARAA----QLGIELLSLDDLLAR--ADFISVHLPKTPETAGLIDKEALAK 221 (529)
T ss_dssp -TTC-------EEEEECTTS----CH----HHHH----HHTCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred -CCC-------EEEEECCCC----Ch----hHHH----hcCcEEcCHHHHHhc--CCEEEECCCCchHHHHHhCHHHHhC
Confidence 253 688888641 11 0111 001111378888886 88887442 2345777766666
Q ss_pred HHccCCCCceEEecC
Q 007703 433 MASFNEVKPLILALS 447 (592)
Q Consensus 433 Ma~~~e~rPIIFaLS 447 (592)
|.+ ..+|.=.|
T Consensus 222 ~k~----g~ilin~a 232 (529)
T 1ygy_A 222 TKP----GVIIVNAA 232 (529)
T ss_dssp SCT----TEEEEECS
T ss_pred CCC----CCEEEECC
Confidence 643 66777777
No 259
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=64.07 E-value=5.5 Score=38.80 Aligned_cols=33 Identities=15% Similarity=0.270 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
..+|+|+|||.||+..|..+.+ .| .++.++|++
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGR-----AQ-------LSTLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----cC-------CcEEEEeCC
Confidence 4689999999999999987764 25 368999987
No 260
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=64.06 E-value=6.3 Score=39.72 Aligned_cols=50 Identities=16% Similarity=0.115 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 314 ~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.++..+.|++..+. -.+++++|+|||..|...+.+.. ..|. ++++.+|+.
T Consensus 151 ~~~ta~~al~~~~~-~~g~~VlV~GaG~vG~~a~qla~-----~~Ga------~~Vi~~~~~ 200 (352)
T 3fpc_A 151 MMTTGFHGAELANI-KLGDTVCVIGIGPVGLMSVAGAN-----HLGA------GRIFAVGSR 200 (352)
T ss_dssp HHHHHHHHHHHTTC-CTTCCEEEECCSHHHHHHHHHHH-----TTTC------SSEEEECCC
T ss_pred hhHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHH-----HcCC------cEEEEECCC
Confidence 34445566655443 35788999999877655544332 2464 578888763
No 261
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=63.37 E-value=5.2 Score=45.44 Aligned_cols=35 Identities=26% Similarity=0.461 Sum_probs=31.2
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
++.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d 444 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 444 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCC
Confidence 688999999999999999988764 87 799999986
No 262
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=63.33 E-value=5.7 Score=40.49 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=27.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
.+|||+|||.||+..|..|.+..- .| .++.++|++-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~--~g-------~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG--SK-------ADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG--GG-------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC--CC-------CeEEEEeCCC
Confidence 479999999999999998876211 13 4678887664
No 263
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=62.91 E-value=9.9 Score=36.14 Aligned_cols=93 Identities=14% Similarity=0.178 Sum_probs=55.1
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHH
Q 007703 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (592)
Q Consensus 328 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 406 (592)
.+...+|+|.|| |-.|..+++.|++ .|... ..+.- + +...+. +-....++.++
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g~~~---~~~~~-----~---------~~~~~~----D~~d~~~~~~~ 56 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVAD-----GAGLP---GEDWV-----F---------VSSKDA----DLTDTAQTRAL 56 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHT-----TTCCT---TCEEE-----E---------CCTTTC----CTTSHHHHHHH
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHh-----cCCcc---ccccc-----c---------cCceec----ccCCHHHHHHH
Confidence 356789999996 8888888777754 35300 00000 0 100000 11112357788
Q ss_pred hcccCCcEEEeccCCCCC-----------------CCHHHHHHHHccCCCCceEEecC
Q 007703 407 VKVIKPTILIGSSGVGRT-----------------FTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 407 V~~vkPtvLIG~S~~~g~-----------------Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
++..++|++|=+.+..+. -|..+++++.+..- +.+||.=|
T Consensus 57 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~v~~SS 113 (319)
T 4b8w_A 57 FEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGA-RKVVSCLS 113 (319)
T ss_dssp HHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTC-SEEEEECC
T ss_pred HhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-CeEEEEcc
Confidence 888899999988776431 12346888877665 77888544
No 264
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=62.83 E-value=2.9 Score=43.17 Aligned_cols=110 Identities=17% Similarity=0.160 Sum_probs=65.9
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC---cccCCCccCCchhchhhccccCCCCCHHHHh
Q 007703 332 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG---LIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (592)
Q Consensus 332 ~riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G---Lv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V 407 (592)
.||+|.| ||..|.-+|-+|+. .|+--++-.-.+.|+|.+. .+.-...| |.+...+|.++.....++.+++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~-----~~~~~e~~~~~l~L~Di~~~~~~~~g~a~D-L~~~~~~~~~~~~~~~~~~~~~ 77 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGN-----GSVFGKDQPIILVLLDITPMMGVLDGVLME-LQDCALPLLKDVIATDKEEIAF 77 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHHH-HHHTCCTTEEEEEEESCHHHHT
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CCCccccCCCEEEEEeCCCccccchhhHhh-hHhhhhcccCCEEEcCCcHHHh
Confidence 5899999 79999988887764 2441111111289999852 11111111 3322223433222224688888
Q ss_pred cccCCcEEEeccCCC---CC-----------CCHHHHHHHHccCCCCce-EEecCCCC
Q 007703 408 KVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEVKPL-ILALSNPT 450 (592)
Q Consensus 408 ~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~e~rPI-IFaLSNPt 450 (592)
+. .|++|=+.+.+ |- ..+++++++.+++. +-+ |+-.|||.
T Consensus 78 ~d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~-~~~~vivvsNPv 132 (333)
T 5mdh_A 78 KD--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAK-KSVKVIVVGNPA 132 (333)
T ss_dssp TT--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSC-TTCEEEECSSSH
T ss_pred CC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEcCCch
Confidence 86 89888554433 21 24678888888887 764 99999997
No 265
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=62.67 E-value=6.6 Score=40.27 Aligned_cols=38 Identities=13% Similarity=0.233 Sum_probs=29.7
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCc
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (592)
...+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQ-----NGFE-----GRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHc-----cCcC-----CCEEEEecCCC
Confidence 35789999999999999998865 3642 36899988643
No 266
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=62.61 E-value=6.1 Score=41.14 Aligned_cols=42 Identities=26% Similarity=0.376 Sum_probs=30.8
Q ss_pred HhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCc
Q 007703 324 LIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (592)
Q Consensus 324 ~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (592)
+.+..-+..+|+|+|||.||+..|..|.+ .| .++.++++..-
T Consensus 4 ~~~~~~~~~~v~IIGaG~aGl~aA~~L~~-----~g-------~~v~v~E~~~~ 45 (489)
T 2jae_A 4 LIGKVKGSHSVVVLGGGPAGLCSAFELQK-----AG-------YKVTVLEARTR 45 (489)
T ss_dssp CCCCCCSCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred hhhcccCCCCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEeccCC
Confidence 34444456799999999999999988764 25 36777777643
No 267
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=62.57 E-value=7 Score=38.13 Aligned_cols=33 Identities=21% Similarity=0.413 Sum_probs=27.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+..|+|+|||.+|+..|-.|.+ .| .++.++|+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~-----~G-------~~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAA-----GG-------HEVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCC
Confidence 4589999999999999988865 36 368899987
No 268
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=62.49 E-value=18 Score=32.93 Aligned_cols=50 Identities=16% Similarity=0.197 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 314 VLAGVVAALKLIGGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 314 ~LAgll~Alr~~g~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.++..+.+++....--.+++++|.|| |..|..+++++.. .| -+++.+|++
T Consensus 22 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~-----~G-------~~V~~~~~~ 72 (198)
T 1pqw_A 22 AYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKM-----IG-------ARIYTTAGS 72 (198)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHH-----HT-------CEEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHH-----cC-------CEEEEEeCC
Confidence 44444555654444446789999994 7777777766543 25 257777763
No 269
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=62.14 E-value=9.3 Score=38.30 Aligned_cols=93 Identities=22% Similarity=0.254 Sum_probs=50.0
Q ss_pred cchHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCc
Q 007703 308 QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (592)
Q Consensus 308 QGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~ 387 (592)
++.....++..+.+++..... .+++++|.|||..|...+.+... .|. ++++.+|+. ..| ++
T Consensus 143 ~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~----~~~---~~ 203 (343)
T 2dq4_A 143 VAAILEPFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDPN----PYR---LA 203 (343)
T ss_dssp HHTTHHHHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC----HHH---HG
T ss_pred HHHhhhHHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----HHH---HH
Confidence 333333444456667623333 88999999998777666554432 363 478888763 111 11
Q ss_pred hhchhhccc--cCCCCCHHHHhccc---CCcEEEeccC
Q 007703 388 HFKKPWAHE--HEPVNNLLDAVKVI---KPTILIGSSG 420 (592)
Q Consensus 388 ~~k~~fA~~--~~~~~~L~e~V~~v---kPtvLIG~S~ 420 (592)
..++- |.. .....++.+.++.. +.|++|=+++
T Consensus 204 ~~~~l-a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g 240 (343)
T 2dq4_A 204 FARPY-ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSG 240 (343)
T ss_dssp GGTTT-CSEEECTTTSCHHHHHHHHHSSCEEEEEECSC
T ss_pred HHHHh-HHhccCcCccCHHHHHHHhcCCCCCEEEECCC
Confidence 11111 221 01113566666532 5788887665
No 270
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=62.01 E-value=8 Score=34.97 Aligned_cols=37 Identities=22% Similarity=0.291 Sum_probs=28.4
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
++.+.+|+|+|+|..|..+|+.|... .| .+++++|++
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~----~g-------~~V~vid~~ 72 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRAR----YG-------KISLGIEIR 72 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHH----HC-------SCEEEEESC
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhc----cC-------CeEEEEECC
Confidence 35677999999999999999988541 14 368888874
No 271
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=61.81 E-value=9 Score=37.11 Aligned_cols=87 Identities=13% Similarity=0.132 Sum_probs=54.3
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcc
Q 007703 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (592)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~ 409 (592)
..||+|.|| |-.|..+++.|+. .|. +++++++. ... ++. ...++.++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~-------~v~~~~r~-----~~~-D~~-----------d~~~~~~~~~~ 53 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGD-------VELVLRTR-----DEL-NLL-----------DSRAVHDFFAS 53 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CTT-------EEEECCCT-----TTC-CTT-----------CHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEecC-----ccC-Ccc-----------CHHHHHHHHHh
Confidence 468999996 7777777776653 252 46666543 111 121 11356777876
Q ss_pred cCCcEEEeccCCCCC-----------------CCHHHHHHHHccCCCCceEEecC
Q 007703 410 IKPTILIGSSGVGRT-----------------FTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 410 vkPtvLIG~S~~~g~-----------------Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
+++|++|=+.+..+. .|..+++++.+..- +.+||.=|
T Consensus 54 ~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~~SS 107 (321)
T 1e6u_A 54 ERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDV-NKLLFLGS 107 (321)
T ss_dssp HCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC-CEEEEECC
T ss_pred cCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEcc
Confidence 689999988876531 13456777766555 67888654
No 272
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=61.72 E-value=7.3 Score=38.67 Aligned_cols=35 Identities=26% Similarity=0.390 Sum_probs=28.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (592)
+..|+|+|||.+|+.+|-.|.+ .| .++.++|+..+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~-----~G-------~~V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAK-----EN-------KNTALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----CC-------CcEEEEeCCCC
Confidence 4689999999999999998865 36 36899998643
No 273
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=61.63 E-value=9.3 Score=38.57 Aligned_cols=35 Identities=31% Similarity=0.465 Sum_probs=27.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (592)
+.+|+|+|||.||+..|-.|.+ .|+ ++.++|++-.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~~ 39 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQKF 39 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSCS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 4689999999999999987754 364 6889998743
No 274
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=61.54 E-value=7.2 Score=37.24 Aligned_cols=33 Identities=15% Similarity=0.156 Sum_probs=25.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEE-EccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL-VDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~l-vD~~ 375 (592)
..+|||+|||.||+..|..+... |. ++.+ +|+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 35899999999999999988653 53 4566 8873
No 275
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=61.30 E-value=7.2 Score=37.87 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=27.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAAR-----SG-------FSVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHh-----CC-------CcEEEEeCC
Confidence 4689999999999999988764 25 368899984
No 276
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=61.17 E-value=17 Score=34.47 Aligned_cols=78 Identities=13% Similarity=0.204 Sum_probs=43.1
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHH
Q 007703 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (592)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e 405 (592)
..++++.++||.||++ ||...++..+.+ .| .+++++|++- ++ +.... .+.-|-....++.+
T Consensus 10 ~~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~~---~~~~~-~~~~D~~~~~~~~~ 70 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNR---GIGLAIAQRLAA-DG-------HKVAVTHRGS----GA---PKGLF-GVEVDVTDSDAVDR 70 (247)
T ss_dssp CCCCCCCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESSS----CC---CTTSE-EEECCTTCHHHHHH
T ss_pred cccCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----HH---HHHhc-CeeccCCCHHHHHH
Confidence 3468889999999753 444555555554 36 3688888741 11 22111 11112122234555
Q ss_pred Hhccc-----CCcEEEeccCCC
Q 007703 406 AVKVI-----KPTILIGSSGVG 422 (592)
Q Consensus 406 ~V~~v-----kPtvLIG~S~~~ 422 (592)
+++.+ ++|+||=..+..
T Consensus 71 ~~~~~~~~~g~id~lv~~Ag~~ 92 (247)
T 1uzm_A 71 AFTAVEEHQGPVEVLVSNAGLS 92 (247)
T ss_dssp HHHHHHHHHSSCSEEEEECSCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 55544 689999777654
No 277
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=61.03 E-value=7.6 Score=36.84 Aligned_cols=38 Identities=21% Similarity=0.205 Sum_probs=25.9
Q ss_pred CCCcccceEEEeCcC---hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 326 GGTLAEHRFLFLGAG---EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 326 g~~l~d~riv~~GAG---sAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
..++++.++||.||+ -.|..+|+.+++ .| -+++++|++
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~-----~G-------~~V~~~~r~ 49 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKR-----EG-------AELAFTYVG 49 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHH-----cC-------CCEEEEecc
Confidence 356889999999985 344555555543 36 368888875
No 278
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=60.97 E-value=26 Score=33.81 Aligned_cols=95 Identities=13% Similarity=0.216 Sum_probs=53.0
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 007703 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (592)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 411 (592)
+|+|.|| |-.|..+++.|++ .| .++.+++.. ..+.+.+...-..+.-+-.+ .++.++++ +
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~-----~g--------~~v~~~~~~---~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~--~ 63 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSE-----SN--------EIVVIDNLS---SGNEEFVNEAARLVKADLAA-DDIKDYLK--G 63 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-----TS--------CEEEECCCS---SCCGGGSCTTEEEECCCTTT-SCCHHHHT--T
T ss_pred EEEEECCCchHHHHHHHHHHh-----CC--------CEEEEEcCC---CCChhhcCCCcEEEECcCCh-HHHHHHhc--C
Confidence 7899997 6677767666643 23 344444321 11111111111111113333 67888887 5
Q ss_pred CcEEEeccCCCCC-C---------------CHHHHHHHHccCCCCceEEecC
Q 007703 412 PTILIGSSGVGRT-F---------------TKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 412 PtvLIG~S~~~g~-F---------------t~evv~~Ma~~~e~rPIIFaLS 447 (592)
+|++|-+.+.... . |..++++|.+..- +.|||.=|
T Consensus 64 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~iv~~SS 114 (313)
T 3ehe_A 64 AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGV-SRIVFTST 114 (313)
T ss_dssp CSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTC-CEEEEECC
T ss_pred CCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCC-CeEEEeCc
Confidence 9999988775421 1 2347788877666 78898655
No 279
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=60.89 E-value=7.2 Score=39.34 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~V~viE~~~ 39 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGR-----QGH-------RVVVVEQAR 39 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCC
Confidence 4689999999999999988865 364 578888754
No 280
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=60.79 E-value=7.3 Score=40.10 Aligned_cols=32 Identities=28% Similarity=0.336 Sum_probs=25.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (592)
-.||.|+|||..|.|||..++.+ |+ ++.++|.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~ 37 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDI 37 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECS
T ss_pred CCeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEEC
Confidence 36899999999999999988763 75 5777775
No 281
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=60.57 E-value=7.4 Score=38.65 Aligned_cols=35 Identities=26% Similarity=0.267 Sum_probs=28.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcc
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv 378 (592)
..|+|+|||.+|+.+|-.|.+ .| .++.++|+....
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~-----~G-------~~V~vie~~~~~ 38 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAK-----QG-------VKTLLVDAFDPP 38 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCCCCC
Confidence 579999999999999998865 26 368999987543
No 282
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=60.45 E-value=4.9 Score=44.16 Aligned_cols=38 Identities=18% Similarity=0.305 Sum_probs=33.0
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
..|++.||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 28 ~~L~~~~VlvvG~GGlGseiak~La~a-----GV------g~itlvD~D 65 (531)
T 1tt5_A 28 EALESAHVCLINATATGTEILKNLVLP-----GI------GSFTIIDGN 65 (531)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECCC
T ss_pred HHHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 356789999999999999999998864 87 799999976
No 283
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=60.44 E-value=7.8 Score=37.30 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=26.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.+|+|+|||.||+..|..+.+ .|. .++.++|++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-----GGV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-----CCC------CcEEEEcCC
Confidence 479999999999999988764 253 278999985
No 284
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=60.36 E-value=7.2 Score=38.82 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=28.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
+..|+|+|||.+|+.+|-.|.+ .|. ++.++|+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~-----~G~-------~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAK-----RGE-------EVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 4679999999999999998865 263 599999874
No 285
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=60.33 E-value=8 Score=38.34 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
..+|+|+|||.||+..|..+.. .| .++.++|++.
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 47 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGM-----NN-------ISCRIIESMP 47 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEecCC
Confidence 5789999999999999987754 25 3688998863
No 286
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=60.33 E-value=8.9 Score=33.79 Aligned_cols=34 Identities=6% Similarity=0.154 Sum_probs=27.2
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
...+|+|+|+|..|..+++.|.. .| .++.++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~-----~g-------~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQ-----RG-------QNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 35689999999999999998864 25 468888874
No 287
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=60.32 E-value=7.2 Score=39.58 Aligned_cols=36 Identities=17% Similarity=0.431 Sum_probs=28.5
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
..+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 345699999999999999988764 364 688888764
No 288
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=60.32 E-value=8.6 Score=38.99 Aligned_cols=34 Identities=12% Similarity=0.203 Sum_probs=26.6
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
...+|+|+|||.||+..|..|.+ .|+ ++.++|+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~ 37 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD-----AGV-------DVDVYERS 37 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 45689999999999999988865 364 56677765
No 289
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=60.28 E-value=5.6 Score=38.40 Aligned_cols=34 Identities=26% Similarity=0.370 Sum_probs=26.5
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
...+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAAR-----ANL-------QPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEccC
Confidence 45689999999999999988764 253 57788854
No 290
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=60.11 E-value=8.1 Score=39.36 Aligned_cols=35 Identities=26% Similarity=0.318 Sum_probs=26.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
+.+|+|+|||.||+..|..|.+ .|+ +++.++|+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~-----~G~------~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQ-----AGI------GKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCC
Confidence 4689999999999999988865 365 2277777653
No 291
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=59.98 E-value=8.3 Score=40.92 Aligned_cols=34 Identities=24% Similarity=0.249 Sum_probs=28.1
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
...+|+|+|+|.||+..|..|... |. ++.++|+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~ 154 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRY 154 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecc
Confidence 457899999999999999988653 53 58899875
No 292
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=59.82 E-value=8 Score=39.21 Aligned_cols=36 Identities=14% Similarity=0.187 Sum_probs=27.1
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
.+.-+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQ-----SGI-------DCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 345689999999999999988865 364 577777753
No 293
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=59.75 E-value=8.9 Score=38.51 Aligned_cols=48 Identities=17% Similarity=0.101 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc
Q 007703 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (592)
Q Consensus 314 ~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (592)
.++..+.|++..+. .+++|+|.|||..|..++.++.. .|. ++++.+|+
T Consensus 153 ~~~ta~~~l~~~~~--~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~ 200 (348)
T 2d8a_A 153 PLGNAVDTVLAGPI--SGKSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEP 200 (348)
T ss_dssp HHHHHHHHHTTSCC--TTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECS
T ss_pred HHHHHHHHHHhcCC--CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 34444566644333 88999999998777766665432 363 46887775
No 294
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=59.73 E-value=8.1 Score=39.23 Aligned_cols=32 Identities=22% Similarity=0.309 Sum_probs=25.8
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
+|+|+|||.||+..|..|.+. | .++.+++++.
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~-----G-------~~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA-----G-------KKVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHc-----C-------CeEEEEecCC
Confidence 699999999999999988753 6 3677887653
No 295
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=59.73 E-value=16 Score=35.44 Aligned_cols=99 Identities=13% Similarity=0.170 Sum_probs=56.1
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 007703 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (592)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~ 409 (592)
.+|+|.|| |-.|..+++.|++ .| .+++.+|+.- ....+.+.. ...+.. +.....++.++++.
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~ 65 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVD-----EG-------LSVVVVDNLQ---TGHEDAITE-GAKFYNGDLRDKAFLRDVFTQ 65 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCT-TSEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCC---cCchhhcCC-CcEEEECCCCCHHHHHHHHhh
Confidence 37899986 7777777776654 25 3678787631 110011211 111111 11222357777775
Q ss_pred cCCcEEEeccCCCCC----------------CCHHHHHHHHccCCCCceEEecC
Q 007703 410 IKPTILIGSSGVGRT----------------FTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 410 vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
.++|++|=+.+.... -|..+++++.+..- +.+||.=|
T Consensus 66 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~~v~~Ss 118 (330)
T 2c20_A 66 ENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKV-DKFIFSST 118 (330)
T ss_dssp SCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTC-CEEEEECC
T ss_pred cCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCC-CEEEEeCC
Confidence 679999988775431 13456777766555 67888544
No 296
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=59.73 E-value=7 Score=38.87 Aligned_cols=34 Identities=21% Similarity=0.318 Sum_probs=27.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
+-.|+|+|||.||+..|-.|.+ .|+ ++.++|++-
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~-----~G~-------~V~l~E~~~ 37 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKRP 37 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 4579999999999999988865 364 577787765
No 297
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=59.72 E-value=14 Score=35.34 Aligned_cols=97 Identities=11% Similarity=0.025 Sum_probs=56.7
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 007703 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (592)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~v 410 (592)
||+|.|| |-.|..+++.|.. +.| .++..++++.- +...+.+....+.. |-.+..+|.++++.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~----~~g-------~~V~~~~R~~~----~~~~~~~~~v~~~~~D~~d~~~l~~~~~~- 65 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIA----NHI-------DHFHIGVRNVE----KVPDDWRGKVSVRQLDYFNQESMVEAFKG- 65 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHH----TTC-------TTEEEEESSGG----GSCGGGBTTBEEEECCTTCHHHHHHHTTT-
T ss_pred EEEEEcCCchHHHHHHHHHhh----CCC-------CcEEEEECCHH----HHHHhhhCCCEEEEcCCCCHHHHHHHHhC-
Confidence 6899996 8888888877543 114 46777766421 11111111111111 22222467788875
Q ss_pred CCcEEEeccCCCCC------CCHHHHHHHHccCCCCceEEecC
Q 007703 411 KPTILIGSSGVGRT------FTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 411 kPtvLIG~S~~~g~------Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
.|++|=+++.... -++.++++|.+..- +.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv-~~iv~~Ss 106 (289)
T 3e48_A 66 -MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGV-AHIIFIGY 106 (289)
T ss_dssp -CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTC-CEEEEEEE
T ss_pred -CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCC-CEEEEEcc
Confidence 7999988765421 24678888887665 77887544
No 298
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=59.67 E-value=6.2 Score=37.79 Aligned_cols=90 Identities=11% Similarity=0.150 Sum_probs=52.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 411 (592)
.||.|+|+|..|..+|..+.. .| .+++++|++ . +.+....+.+ ......++.|+++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~-----~g-------~~v~~~~~~----~---~~~~~~~~~~--g~~~~~~~~~~~~~-- 60 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQ-----TP-------HELIISGSS----L---ERSKEIAEQL--ALPYAMSHQDLIDQ-- 60 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-----SS-------CEEEEECSS----H---HHHHHHHHHH--TCCBCSSHHHHHHT--
T ss_pred cEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEECCC----H---HHHHHHHHHc--CCEeeCCHHHHHhc--
Confidence 489999999999999887643 24 467888763 1 1122221111 11123578888874
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCC
Q 007703 412 PTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 412 PtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
+|++|=+.. + ...+++++.+. + ..+|.-+++-.
T Consensus 61 ~D~Vi~~v~-~-~~~~~v~~~l~---~-~~~vv~~~~~~ 93 (259)
T 2ahr_A 61 VDLVILGIK-P-QLFETVLKPLH---F-KQPIISMAAGI 93 (259)
T ss_dssp CSEEEECSC-G-GGHHHHHTTSC---C-CSCEEECCTTC
T ss_pred CCEEEEEeC-c-HhHHHHHHHhc---c-CCEEEEeCCCC
Confidence 888774332 3 34566666553 3 45676665544
No 299
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=59.18 E-value=24 Score=34.41 Aligned_cols=97 Identities=13% Similarity=0.079 Sum_probs=57.8
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhh----------cc-ccC
Q 007703 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW----------AH-EHE 398 (592)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~f----------A~-~~~ 398 (592)
..+|+|.|| |-.|..+++.|++ .| .+++++|+.. . ........+ .. |-.
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~~~~~Dl~ 65 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLA-----HG-------YDVVIADNLV----N---SKREAIARIEKITGKTPAFHETDVS 65 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCS----S---SCTHHHHHHHHHHSCCCEEECCCTT
T ss_pred CcEEEEecCCcHHHHHHHHHHHH-----CC-------CcEEEEecCC----c---chHHHHHHHHhhcCCCceEEEeecC
Confidence 468999996 6666666666654 26 4688887641 1 111111111 11 111
Q ss_pred CCCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHccCCCCceEEecC
Q 007703 399 PVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 399 ~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
...++.++++..++|++|=+.+.... -|..++++|.+..- +.|||.=|
T Consensus 66 d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~iv~~SS 129 (341)
T 3enk_A 66 DERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAV-KRIVFSSS 129 (341)
T ss_dssp CHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC-CEEEEEEE
T ss_pred CHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCC-CEEEEEec
Confidence 22357778877789999987775421 14467888887666 78888644
No 300
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=59.17 E-value=7.7 Score=37.68 Aligned_cols=33 Identities=21% Similarity=0.347 Sum_probs=26.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
.+|+|+|||.+|+..|..|.+ .|+ ++.++|+.-
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~-----~G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEECCC
Confidence 479999999999999988865 364 578888763
No 301
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=59.02 E-value=9.4 Score=39.23 Aligned_cols=37 Identities=19% Similarity=0.372 Sum_probs=28.7
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc
Q 007703 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (592)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (592)
..+.+..|||+|||.+|+.+|-.|.+. | ..++.++|+
T Consensus 19 ~~m~~~dVvIIGgGiaGls~A~~La~~-----G------~~~V~vlE~ 55 (448)
T 3axb_A 19 SHMPRFDYVVVGAGVVGLAAAYYLKVW-----S------GGSVLVVDA 55 (448)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHH-----H------CSCEEEEES
T ss_pred ccCCcCCEEEECcCHHHHHHHHHHHhC-----C------CCcEEEEcc
Confidence 335677999999999999999988763 4 147899998
No 302
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=58.82 E-value=8.4 Score=38.04 Aligned_cols=32 Identities=31% Similarity=0.530 Sum_probs=26.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.||.|+|+|..|.+||..++.+ |. +++++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999988753 63 68888874
No 303
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=58.57 E-value=10 Score=37.92 Aligned_cols=36 Identities=14% Similarity=0.257 Sum_probs=28.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
+..|+|+|||.+|+.+|-.|.+. .|. .++.++|+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~----~G~------~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKN----HGI------TNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HCC------CCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHh----cCC------CcEEEEeCCC
Confidence 56899999999999999988751 151 4689999875
No 304
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=58.47 E-value=8.7 Score=39.51 Aligned_cols=37 Identities=16% Similarity=0.281 Sum_probs=28.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcc
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv 378 (592)
.+|||+|||.||+..|..|.+ .|.. .+|.++|+..-.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~-----~g~~-----~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRA-----EGFE-----GRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHc-----cCcC-----CeEEEEECCCCC
Confidence 489999999999999998865 3642 469999886443
No 305
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=58.22 E-value=8 Score=41.27 Aligned_cols=32 Identities=19% Similarity=0.175 Sum_probs=26.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.||.|+|+|..|..+|..+... | .+++++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-----G-------~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-----G-------ANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhc-----C-------CEEEEEECC
Confidence 4899999999999999988753 5 367788864
No 306
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=58.19 E-value=23 Score=33.61 Aligned_cols=77 Identities=13% Similarity=0.158 Sum_probs=40.4
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhh------c-cccCCC
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW------A-HEHEPV 400 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~f------A-~~~~~~ 400 (592)
+++++++||.||++ ||..-++..+.+ .| -+++++|++- .+ +......+ . -|-...
T Consensus 4 ~l~~k~~lVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~----~~---~~~~~~~~~~~~~~~~~Dv~~~ 65 (257)
T 3tpc_A 4 QLKSRVFIVTGASS---GLGAAVTRMLAQ-EG-------ATVLGLDLKP----PA---GEEPAAELGAAVRFRNADVTNE 65 (257)
T ss_dssp CCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESSC----C---------------CEEEECCTTCH
T ss_pred ccCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----HH---HHHHHHHhCCceEEEEccCCCH
Confidence 57788999999853 444445555544 36 3688887642 11 11111111 1 111122
Q ss_pred CCHHHHhccc-----CCcEEEeccCCC
Q 007703 401 NNLLDAVKVI-----KPTILIGSSGVG 422 (592)
Q Consensus 401 ~~L~e~V~~v-----kPtvLIG~S~~~ 422 (592)
.++.++++.+ +.|+||=..+..
T Consensus 66 ~~v~~~~~~~~~~~g~id~lv~nAg~~ 92 (257)
T 3tpc_A 66 ADATAALAFAKQEFGHVHGLVNCAGTA 92 (257)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455556554 799999766643
No 307
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=57.93 E-value=8.9 Score=40.04 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+.+|||+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 36 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVE-----QG-------AQVTLIERG 36 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 4689999999999999987754 25 479999986
No 308
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=57.83 E-value=17 Score=35.19 Aligned_cols=98 Identities=16% Similarity=0.294 Sum_probs=54.1
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 007703 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (592)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~v 410 (592)
||+|.|| |-.|..+++.|++ .| .+++.+|+.- ......+.. ...+.. +-....++.++++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~ 65 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLA-----RG-------LEVAVLDNLA---TGKRENVPK-GVPFFRVDLRDKEGVERAFREF 65 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEECCCS---SCCGGGSCT-TCCEECCCTTCHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHH-----CC-------CEEEEEECCC---cCchhhccc-CeEEEECCCCCHHHHHHHHHhc
Confidence 6899987 6666666666643 25 3677777621 111111111 111111 111223567778766
Q ss_pred CCcEEEeccCCCCC----------------CCHHHHHHHHccCCCCceEEecC
Q 007703 411 KPTILIGSSGVGRT----------------FTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 411 kPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
++|++|=+.+..+. -+..+++++.+..- +.|||.=|
T Consensus 66 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~iv~~SS 117 (311)
T 2p5y_A 66 RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGV-EKLVFAST 117 (311)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-SEEEEEEE
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CEEEEeCC
Confidence 89999988775431 03456677766555 67887644
No 309
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=57.81 E-value=8.3 Score=40.30 Aligned_cols=34 Identities=18% Similarity=0.268 Sum_probs=26.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
||||+|||.||+-.|..+.+. |. .-+|.++|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~-----~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DK-----ESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CS-----SSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CC-----CCcEEEEeCCC
Confidence 799999999999999877543 53 13688998754
No 310
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=57.71 E-value=8.1 Score=38.20 Aligned_cols=35 Identities=11% Similarity=0.227 Sum_probs=28.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcc
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv 378 (592)
..|+|+|||.+|+.+|-.|.+ .| .++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~-----~G-------~~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATR-----AG-------LNVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHH-----TT-------CCEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCCCC
Confidence 479999999999999998865 26 368999987543
No 311
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=57.71 E-value=24 Score=34.81 Aligned_cols=21 Identities=24% Similarity=0.433 Sum_probs=17.6
Q ss_pred ceEEEeCcChHHHHHHHHHHH
Q 007703 332 HRFLFLGAGEAGTGIAELIAL 352 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~ 352 (592)
.||+++|+|..|--+++.+.+
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~ 24 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEE 24 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHH
T ss_pred eEEEEECcCHHHHHHHHHHHh
Confidence 589999999999888877654
No 312
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=57.33 E-value=22 Score=34.52 Aligned_cols=97 Identities=20% Similarity=0.145 Sum_probs=53.3
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 007703 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (592)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~ 409 (592)
.||+|.|| |-.|..+++.|++ .| .+++.+|++. +..+.+...+..+.. +-.+..++.++++
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~- 76 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRA-----AG-------HDLVLIHRPS----SQIQRLAYLEPECRVAEMLDHAGLERALR- 76 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEECTT----SCGGGGGGGCCEEEECCTTCHHHHHHHTT-
T ss_pred CEEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEecCh----HhhhhhccCCeEEEEecCCCHHHHHHHHc-
Confidence 38999996 8888888777764 25 4688887742 111112111111111 1122235777777
Q ss_pred cCCcEEEeccCCCCCC--------------CHHHHHHHHccCCCCceEEecC
Q 007703 410 IKPTILIGSSGVGRTF--------------TKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 410 vkPtvLIG~S~~~g~F--------------t~evv~~Ma~~~e~rPIIFaLS 447 (592)
++|++|=+.+..+.. +..+++++.+..- +.+||.=|
T Consensus 77 -~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~~v~~SS 126 (342)
T 2x4g_A 77 -GLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARV-PRILYVGS 126 (342)
T ss_dssp -TCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTC-SCEEEECC
T ss_pred -CCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-CeEEEECC
Confidence 499999887754311 3467777776655 67887544
No 313
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=57.23 E-value=13 Score=40.38 Aligned_cols=36 Identities=28% Similarity=0.400 Sum_probs=20.5
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
++++.+++|.|||.+|.++|..+.+ .|. +++++++.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~-----~G~-------~V~i~~R~ 396 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKE-----KGA-------KVVIANRT 396 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHH-----HCC--------CEEEESS
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 5778899999998555555555543 262 58888764
No 314
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=57.12 E-value=8.9 Score=41.19 Aligned_cols=107 Identities=23% Similarity=0.307 Sum_probs=58.0
Q ss_pred cceEEEeCcChHHH-HHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcc
Q 007703 331 EHRFLFLGAGEAGT-GIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (592)
Q Consensus 331 d~riv~~GAGsAg~-GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~ 409 (592)
-+||.|+|.|-+|+ |+|++|.+ .| .++...|.+= ....+.|.....++-- . .+ .+-+.
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~-----~G-------~~V~~~D~~~---~~~~~~l~~~gi~~~~-g---~~-~~~~~- 80 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLAN-----EG-------YQISGSDLAP---NSVTQHLTALGAQIYF-H---HR-PENVL- 80 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHH-----TT-------CEEEEECSSC---CHHHHHHHHTTCEEES-S---CC-GGGGT-
T ss_pred CCEEEEEEEcHhhHHHHHHHHHh-----CC-------CeEEEEECCC---CHHHHHHHHCCCEEEC-C---CC-HHHcC-
Confidence 37999999999999 58988765 37 4688888641 0000011111111100 0 11 12233
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCCCCCCCCHHHHhccccC-cEEEecCC
Q 007703 410 IKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPTSQSECTAEEAYTWSKG-RAIFASGS 474 (592)
Q Consensus 410 vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~~aEct~e~A~~wt~G-~aifAsGS 474 (592)
.+|++|=.++.+ .=++++.++... . -|||= . +|-++.+.++ +.|-.|||
T Consensus 81 -~~d~vV~Spgi~-~~~p~~~~a~~~--g-i~v~~-------~----~e~l~~~~~~~~~IaVTGT 130 (494)
T 4hv4_A 81 -DASVVVVSTAIS-ADNPEIVAAREA--R-IPVIR-------R----AEMLAELMRYRHGIAVAGT 130 (494)
T ss_dssp -TCSEEEECTTSC-TTCHHHHHHHHT--T-CCEEE-------H----HHHHHHHHTTSEEEEEECS
T ss_pred -CCCEEEECCCCC-CCCHHHHHHHHC--C-CCEEc-------H----HHHHHHHhcCCCEEEEecC
Confidence 378888555554 457888777654 2 35551 1 2333444444 46777886
No 315
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=56.85 E-value=8 Score=37.61 Aligned_cols=33 Identities=24% Similarity=0.287 Sum_probs=26.8
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (592)
...+|+|+|||.||+..|..+.+ .|+ ++.++|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAAR-----AEL-------KPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEec
Confidence 35689999999999999998865 253 6888887
No 316
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=56.79 E-value=8.2 Score=37.79 Aligned_cols=36 Identities=22% Similarity=0.246 Sum_probs=29.5
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+|++.++||+|+|..|..-+++|+.+ | .++.++|.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~-----G-------A~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQE-----G-------AAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGG-----C-------CCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEECCC
Confidence 57889999999999999998888653 5 468888864
No 317
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=56.68 E-value=11 Score=37.52 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=27.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
+..|+|+|||.+|+.+|-.|.+ .| .++.++|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~-----~G-------~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILAR-----KG-------YSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeccC
Confidence 4689999999999999988854 36 4789999764
No 318
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=56.57 E-value=8.6 Score=37.00 Aligned_cols=98 Identities=16% Similarity=0.174 Sum_probs=56.7
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 007703 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (592)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~ 409 (592)
.+|+|.|| |-.|..+++.|++. ..| .+++.+|++. .... +.+ +..+.. +-.+..++.++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~-~~~-~~~~~~~D~~d~~~~~~~~~~ 66 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKL---YGT-------ENVIASDIRK----LNTD-VVN-SGPFEVVNALDFNQIEHLVEV 66 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHH---HCG-------GGEEEEESCC----CSCH-HHH-SSCEEECCTTCHHHHHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHh---CCC-------CEEEEEcCCC----cccc-ccC-CCceEEecCCCHHHHHHHHhh
Confidence 57999998 88888888777542 012 4688887641 1100 100 111111 21222357788887
Q ss_pred cCCcEEEeccCCCCC---------------CCHHHHHHHHccCCCCceEEec
Q 007703 410 IKPTILIGSSGVGRT---------------FTKEVIEAMASFNEVKPLILAL 446 (592)
Q Consensus 410 vkPtvLIG~S~~~g~---------------Ft~evv~~Ma~~~e~rPIIFaL 446 (592)
.++|++|=+.+.... -|..+++++.+..- +.+||.=
T Consensus 67 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~~S 117 (312)
T 2yy7_A 67 HKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKI-KKIFWPS 117 (312)
T ss_dssp TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSC-SEEECCE
T ss_pred cCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCC-CEEEEec
Confidence 789999988775421 13456777766554 6788753
No 319
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=56.53 E-value=9.3 Score=38.40 Aligned_cols=36 Identities=14% Similarity=0.279 Sum_probs=28.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv 378 (592)
+..|+|+|||.+|+.+|-.|.+ .|. ++.++|+....
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~-----~G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAE-----RGH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCCCC
Confidence 3579999999999999988865 363 68899987554
No 320
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=56.49 E-value=12 Score=38.26 Aligned_cols=103 Identities=23% Similarity=0.333 Sum_probs=63.5
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCC--CCCHHHHhcc
Q 007703 333 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP--VNNLLDAVKV 409 (592)
Q Consensus 333 riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~--~~~L~e~V~~ 409 (592)
||.|+| +|..|..+|-+|... .++ ...+.|+|.+-. ..+..-+|.+. ++-..-.. ..+..++.++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~----~~~-----~~el~L~Di~~~-~~G~a~Dl~~~--~~~~~v~~~~~~~~~~~~~~ 69 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQ----LPS-----GSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGEDATPALEG 69 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH----SCT-----TEEEEEECSSTT-HHHHHHHHHTS--CSSEEEEEECSSCCHHHHTT
T ss_pred EEEEECCCCHHHHHHHHHHHhC----CCC-----CceEEEEecCCC-chhHHHHhhCC--CCCceEEEecCCCcHHHhCC
Confidence 799999 799999998777542 133 267999999741 11110012211 11000000 0246678876
Q ss_pred cCCcEEEeccCCC---CC-----C------CHHHHHHHHccCCCCceEEecCCCC
Q 007703 410 IKPTILIGSSGVG---RT-----F------TKEVIEAMASFNEVKPLILALSNPT 450 (592)
Q Consensus 410 vkPtvLIG~S~~~---g~-----F------t~evv~~Ma~~~e~rPIIFaLSNPt 450 (592)
.|+.|=+.+.+ |- | -+++++.+.+++. .-+|+-.|||.
T Consensus 70 --aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p-~a~vlvvtNPv 121 (312)
T 3hhp_A 70 --ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCP-KACIGIITNPV 121 (312)
T ss_dssp --CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCT-TSEEEECSSCH
T ss_pred --CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEEecCcc
Confidence 89888555543 31 1 2466777888888 89999999998
No 321
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=56.43 E-value=9.5 Score=38.96 Aligned_cols=37 Identities=24% Similarity=0.311 Sum_probs=29.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv 378 (592)
+..|||+|||.+|+..|-.|.+ .|. +++.++|+....
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~-----~G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLAR-----RGY------TNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----cCC------CcEEEEeCCCCC
Confidence 4579999999999999988765 364 378999987553
No 322
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=56.43 E-value=35 Score=34.31 Aligned_cols=99 Identities=17% Similarity=0.123 Sum_probs=56.2
Q ss_pred ccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc-ccCCCCCHHHHh
Q 007703 330 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAV 407 (592)
Q Consensus 330 ~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V 407 (592)
...+|+|.|| |-.|..+++.|++ .| .+++.+|++- .....+...+..+.. +-....++.+++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~ 91 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKH-----EG-------HYVIASDWKK----NEHMTEDMFCDEFHLVDLRVMENCLKVT 91 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----CSSSCGGGTCSEEEECCTTSHHHHHHHH
T ss_pred cCCeEEEECCccHHHHHHHHHHHH-----CC-------CeEEEEECCC----ccchhhccCCceEEECCCCCHHHHHHHh
Confidence 3468999998 7777777777654 25 4688888742 111111111111111 112223577777
Q ss_pred cccCCcEEEeccCCCCC--C---------------CHHHHHHHHccCCCCceEEecC
Q 007703 408 KVIKPTILIGSSGVGRT--F---------------TKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 408 ~~vkPtvLIG~S~~~g~--F---------------t~evv~~Ma~~~e~rPIIFaLS 447 (592)
+ ++|++|=+.+.... | |..+++++.+..- +.|||.=|
T Consensus 92 ~--~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~-~~~V~~SS 145 (379)
T 2c5a_A 92 E--GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGI-KRFFYASS 145 (379)
T ss_dssp T--TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTC-SEEEEEEE
T ss_pred C--CCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCC-CEEEEEee
Confidence 6 59999988775432 1 2356677666554 67887544
No 323
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=56.40 E-value=10 Score=37.97 Aligned_cols=33 Identities=15% Similarity=0.337 Sum_probs=26.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
.+|+|+|||.||+..|-.|.+. |+ ++.++|+.-
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 4799999999999999888653 64 577888754
No 324
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=56.40 E-value=32 Score=31.06 Aligned_cols=91 Identities=11% Similarity=0.162 Sum_probs=51.8
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchh--chhhcc-ccCCCCCHHHHhc
Q 007703 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF--KKPWAH-EHEPVNNLLDAVK 408 (592)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~--k~~fA~-~~~~~~~L~e~V~ 408 (592)
||+|.|| |-.|..+++.|++ .| .++++++++. +.+... ...+.. |-.+..+ ++++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~-------~~~~~~~~~~~~~~~D~~d~~~--~~~~ 60 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKN-----RG-------HEVTAIVRNA-------GKITQTHKDINILQKDIFDLTL--SDLS 60 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCS-------HHHHHHCSSSEEEECCGGGCCH--HHHT
T ss_pred eEEEEcCCchhHHHHHHHHHh-----CC-------CEEEEEEcCc-------hhhhhccCCCeEEeccccChhh--hhhc
Confidence 7999996 7778777777754 25 4688887741 111111 001111 1111112 6666
Q ss_pred ccCCcEEEeccCCCCCC-------CHHHHHHHHccCCCCceEEecC
Q 007703 409 VIKPTILIGSSGVGRTF-------TKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 409 ~vkPtvLIG~S~~~g~F-------t~evv~~Ma~~~e~rPIIFaLS 447 (592)
. +|++|=+.+..... ++.++++|.+... +.+||.-|
T Consensus 61 ~--~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~-~~~v~~SS 103 (221)
T 3ew7_A 61 D--QNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVS-PRLLVVGG 103 (221)
T ss_dssp T--CSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCS-SEEEEECC
T ss_pred C--CCEEEECCcCCccccchHHHHHHHHHHHHHhcCC-ceEEEEec
Confidence 4 89999877764321 3678888876544 56776544
No 325
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=56.36 E-value=21 Score=36.10 Aligned_cols=44 Identities=23% Similarity=0.144 Sum_probs=27.3
Q ss_pred HHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc
Q 007703 319 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (592)
Q Consensus 319 l~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (592)
+.|+...+.--.+++++|.|+|..|...+.++.. .|. +++.+|+
T Consensus 178 ~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~-----~Ga-------~Vi~~~~ 221 (363)
T 3uog_A 178 WFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKA-----TGA-------EVIVTSS 221 (363)
T ss_dssp HHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEec
Confidence 4445333444467899999999777665544432 362 5777765
No 326
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=56.11 E-value=8.6 Score=39.89 Aligned_cols=36 Identities=22% Similarity=0.379 Sum_probs=28.2
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
...+|+|+|||.||+..|..|.+ .|.. .++.++|++
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~-----~G~~-----~~V~v~E~~ 40 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA-----EKAF-----DQVTLFERR 40 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-----TTCC-----SEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-----cCCC-----CCeEEEecC
Confidence 35689999999999999988864 3641 378888876
No 327
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=56.04 E-value=12 Score=38.62 Aligned_cols=38 Identities=18% Similarity=0.188 Sum_probs=29.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv 378 (592)
..+|||+|||.||+..|..+.+. |. ..++.++|+..-+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~lie~~~~~ 44 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQA-----GY-----QGLITVVGDEAER 44 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHH-----TC-----CSCEEEEESSCSC
T ss_pred CCcEEEECChHHHHHHHHHHHcc-----CC-----CCeEEEEECCCCC
Confidence 46899999999999999988753 54 1369999987643
No 328
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=55.80 E-value=10 Score=45.00 Aligned_cols=37 Identities=24% Similarity=0.399 Sum_probs=33.5
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+|+..||+|+|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 24 rL~~s~VlIvG~GGlGseiak~La~a-----GV------g~itlvD~D 60 (1015)
T 3cmm_A 24 KMQTSNVLILGLKGLGVEIAKNVVLA-----GV------KSMTVFDPE 60 (1015)
T ss_dssp HHTTCEEEEECCSHHHHHHHHHHHHH-----CC------SEEEEECCS
T ss_pred HHhcCEEEEECCChHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 57889999999999999999999876 87 799999986
No 329
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=55.62 E-value=24 Score=35.95 Aligned_cols=91 Identities=21% Similarity=0.294 Sum_probs=53.1
Q ss_pred CCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccC
Q 007703 306 DIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS 385 (592)
Q Consensus 306 DiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~ 385 (592)
+.++.....++..+.+++..+.+ .+++++|.|||..|...+.+.. ..|. ++++.+|+.
T Consensus 159 ~~~aal~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak-----~~Ga------~~Vi~~~~~---------- 216 (370)
T 4ej6_A 159 PVHGAFCEPLACCLHGVDLSGIK-AGSTVAILGGGVIGLLTVQLAR-----LAGA------TTVILSTRQ---------- 216 (370)
T ss_dssp TTGGGGHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHH-----HTTC------SEEEEECSC----------
T ss_pred HHHHhhhhHHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHH-----HcCC------CEEEEECCC----------
Confidence 34554445566667777665543 4789999999876655444332 2464 578877653
Q ss_pred Cchhchhhccc-------cCCCCCHHHHhcc---c---CCcEEEeccC
Q 007703 386 LQHFKKPWAHE-------HEPVNNLLDAVKV---I---KPTILIGSSG 420 (592)
Q Consensus 386 l~~~k~~fA~~-------~~~~~~L~e~V~~---v---kPtvLIG~S~ 420 (592)
+.+..+|+. .....++.+.++. . +.|++|=+++
T Consensus 217 --~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G 262 (370)
T 4ej6_A 217 --ATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAG 262 (370)
T ss_dssp --HHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSC
T ss_pred --HHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCC
Confidence 223334432 1112456666654 1 5788887766
No 330
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=55.47 E-value=36 Score=35.30 Aligned_cols=136 Identities=7% Similarity=0.011 Sum_probs=88.8
Q ss_pred HHHHHHHHHhcCCCeeeeeecCCCchHHHHHHHHcCCCceec--cCCcchHHHHHHHHHHHHHHhC------CCcccceE
Q 007703 263 DEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIG------GTLAEHRF 334 (592)
Q Consensus 263 defv~av~~~fGp~~lIqfEDf~~~~Af~lL~ryr~~~~~FN--DDiQGTaaV~LAgll~Alr~~g------~~l~d~ri 334 (592)
...+. +-.+| .++++ +-.++ +.+.+.|.+|- ++||.| || .---.=+||=++.=.+..| +++++.||
T Consensus 91 ~DTar-vls~~-~D~iv-iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~v 164 (328)
T 3grf_A 91 QDTAE-VFSRM-VDICT-ARLAT-KEMMREMAQHA-SVPCINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKF 164 (328)
T ss_dssp HHHHH-HHTTT-CSEEE-EECSS-HHHHHHHHHHC-SSCEEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCCE
T ss_pred HHHHH-HHHhh-CCEEE-EecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhCCccccccccCCcEE
Confidence 33343 44567 55544 55554 45666677764 689999 66 5566677888887777777 37999999
Q ss_pred EEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccc---c---CCCCCHHHHhc
Q 007703 335 LFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE---H---EPVNNLLDAVK 408 (592)
Q Consensus 335 v~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~---~---~~~~~L~e~V~ 408 (592)
.++|-+. + .+|+-++.++.+ .|+ +|.++-.+|+..+-..+ +...-+.+|.. + ....++.|+|+
T Consensus 165 a~vGD~~-~-~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~p~~~-~~~~~~~~~~~~~~g~~v~~~~d~~eav~ 233 (328)
T 3grf_A 165 AYCGDSM-N-NVTYDLMRGCAL-LGM-------ECHVCCPDHKDFKPIKE-VIDECEEIIAKHGTGGSIKIFHDCKKGCE 233 (328)
T ss_dssp EEESCCS-S-HHHHHHHHHHHH-HTC-------EEEEECCSSGGGSCCHH-HHHHHHHHHHHHTCCCEEEEESSHHHHHT
T ss_pred EEeCCCC-c-chHHHHHHHHHH-cCC-------EEEEECChHhhhCCCHH-HHHHHHHHHhhccCCCeEEEEcCHHHHhc
Confidence 9999985 2 588888887776 474 68999898885311111 21222233322 1 12368999999
Q ss_pred ccCCcEEEe
Q 007703 409 VIKPTILIG 417 (592)
Q Consensus 409 ~vkPtvLIG 417 (592)
. .||+.-
T Consensus 234 ~--aDvvyt 240 (328)
T 3grf_A 234 G--VDVVYT 240 (328)
T ss_dssp T--CSEEEE
T ss_pred C--CCEEEe
Confidence 7 999974
No 331
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=55.46 E-value=11 Score=40.87 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=28.9
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGE 42 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999998864 364 589999874
No 332
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=55.41 E-value=9.2 Score=40.11 Aligned_cols=35 Identities=20% Similarity=0.220 Sum_probs=28.4
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
++.+++|+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~-----~g-------~~V~lie~~~ 39 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQ-----LG-------LKVLAVEAGE 39 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 35789999999999999988854 25 4799999864
No 333
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=55.33 E-value=10 Score=39.20 Aligned_cols=36 Identities=19% Similarity=0.373 Sum_probs=27.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
.+|||+|||.||+..|..|.+.+. .| .++.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~--~g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALG--SG-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHG--GG-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCC--Cc-------CEEEEEeCCC
Confidence 589999999999999998876431 13 4677787754
No 334
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=55.32 E-value=10 Score=39.85 Aligned_cols=33 Identities=30% Similarity=0.549 Sum_probs=27.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAA-----FG-------KRVALIESK 36 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CcEEEEcCC
Confidence 4689999999999999998865 25 479999986
No 335
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=55.32 E-value=9.8 Score=40.09 Aligned_cols=38 Identities=18% Similarity=0.324 Sum_probs=27.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.+|+|+|||.||+..|..+.+.. ..|+.. .++.++|+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~--~~G~~~----~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQ--EKGAEI----PELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH--HTTCCC----CEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhhh--hcCCCC----CcEEEEEcC
Confidence 48999999999999999887632 136420 138888876
No 336
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=55.25 E-value=56 Score=34.10 Aligned_cols=131 Identities=19% Similarity=0.235 Sum_probs=84.3
Q ss_pred HHHhcCCCeeeeeecCCCchHHHHHHHHcCCCceec--cCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHH
Q 007703 269 VKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGI 346 (592)
Q Consensus 269 v~~~fGp~~lIqfEDf~~~~Af~lL~ryr~~~~~FN--DDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GI 346 (592)
+-.+| .++++ +--+. +.+.+.|.+|- ++||.| || .---.=+||=++.-.+..| +|++.||+++|-| . -+
T Consensus 121 vLs~y-~D~Iv-iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~TI~E~~G-~l~glkva~vGD~-~--nv 191 (340)
T 4ep1_A 121 VLSHY-IDGIM-IRTFS-HADVEELAKES-SIPVINGLTD-DHHPCQALADLMTIYEETN-TFKGIKLAYVGDG-N--NV 191 (340)
T ss_dssp HHHHH-CSEEE-EECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCC-C--HH
T ss_pred HHHHh-CCEEE-EecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCC-c--hh
Confidence 34456 56544 55443 45566666765 689998 55 4445567777777666665 5999999999998 2 38
Q ss_pred HHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccc-c---CCCCCHHHHhcccCCcEEEeccCC
Q 007703 347 AELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-H---EPVNNLLDAVKVIKPTILIGSSGV 421 (592)
Q Consensus 347 A~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~-~---~~~~~L~e~V~~vkPtvLIG~S~~ 421 (592)
|+-++.++.+ .|+ +|.++-.+|+.-.. .+-..-+.+|+. + ....++.|+|+. .||+.-..=+
T Consensus 192 a~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~G~~v~~~~d~~eav~~--aDVvyt~~w~ 257 (340)
T 4ep1_A 192 CHSLLLASAK-VGM-------HMTVATPVGYRPNE---EIVKKALAIAKETGAEIEILHNPELAVNE--ADFIYTDVWM 257 (340)
T ss_dssp HHHHHHHHHH-HTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHCCCEEEESCHHHHHTT--CSEEEECCC-
T ss_pred HHHHHHHHHH-cCC-------EEEEECCcccCCCH---HHHHHHHHHHHHcCCeEEEECCHHHHhCC--CCEEEecCcc
Confidence 8888887766 374 68888888874321 111112233332 1 123689999997 9999876544
No 337
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=55.20 E-value=9.7 Score=39.81 Aligned_cols=37 Identities=14% Similarity=0.172 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (592)
..+|||+|||.||+..|..|.+. ..| .+|.++|+..-
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~---~~g-------~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRL---DPE-------AHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHH---CTT-------SEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhh---CcC-------CCEEEEECCCc
Confidence 46899999999999999988653 012 47888888644
No 338
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=55.17 E-value=11 Score=39.12 Aligned_cols=33 Identities=21% Similarity=0.245 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+.+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~-----g-------~~V~liE~~ 38 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL-----G-------FKTTCIEKR 38 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCC
Confidence 45799999999999999887653 5 378999986
No 339
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=54.89 E-value=18 Score=36.24 Aligned_cols=103 Identities=14% Similarity=0.156 Sum_probs=57.4
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCc-hhchhhcc-ccCCCCCHH
Q 007703 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAH-EHEPVNNLL 404 (592)
Q Consensus 328 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~-~~k~~fA~-~~~~~~~L~ 404 (592)
+++..+|+|.|| |-.|..+++.|++ .|. .+++.+|+..- .....+. ..+..+.. +-....++.
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~-----~g~------~~V~~~~r~~~---~~~~~l~~~~~v~~~~~Dl~d~~~l~ 94 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLE-----LGV------NQVHVVDNLLS---AEKINVPDHPAVRFSETSITDDALLA 94 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHH-----TTC------SEEEEECCCTT---CCGGGSCCCTTEEEECSCTTCHHHHH
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHH-----cCC------ceEEEEECCCC---CchhhccCCCceEEEECCCCCHHHHH
Confidence 466679999997 7778777777654 251 46888876421 1001121 00111111 111112455
Q ss_pred HHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcc-CCCCceEEecC
Q 007703 405 DAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASF-NEVKPLILALS 447 (592)
Q Consensus 405 e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~-~e~rPIIFaLS 447 (592)
++++ ++|++|=+.+.... -+..+++++.+. .- +.+||.=|
T Consensus 95 ~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~-~~~V~~SS 151 (377)
T 2q1s_A 95 SLQD--EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRL-KKVVYSAA 151 (377)
T ss_dssp HCCS--CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSC-CEEEEEEE
T ss_pred HHhh--CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEEeCC
Confidence 6666 69999988775431 145567777665 44 67887544
No 340
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=54.68 E-value=14 Score=34.24 Aligned_cols=69 Identities=14% Similarity=0.192 Sum_probs=38.5
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhccc-
Q 007703 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI- 410 (592)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v- 410 (592)
++||.|| |-.|..+++.|++ .| .+++++|++. + .+.. .+.-+.....++.++++..
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~---~~~~---~~~~D~~~~~~~~~~~~~~~ 60 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLAR-----AG-------HTVIGIDRGQ----A---DIEA---DLSTPGGRETAVAAVLDRCG 60 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSS----S---SEEC---CTTSHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCh----h---Hccc---cccCCcccHHHHHHHHHHcC
Confidence 6899987 5555555555543 35 3688888741 1 1111 1111111113466666655
Q ss_pred -CCcEEEeccCCCC
Q 007703 411 -KPTILIGSSGVGR 423 (592)
Q Consensus 411 -kPtvLIG~S~~~g 423 (592)
++|+||=+.+...
T Consensus 61 ~~~d~vi~~Ag~~~ 74 (255)
T 2dkn_A 61 GVLDGLVCCAGVGV 74 (255)
T ss_dssp TCCSEEEECCCCCT
T ss_pred CCccEEEECCCCCC
Confidence 8999998877543
No 341
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=54.65 E-value=10 Score=39.97 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
+.+++|+|||.||+..|..+.+ .| .++.++|++.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~-----~G-------~~V~liEk~~ 58 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQ-----LG-------MKVAVVEKRS 58 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCC
Confidence 4689999999999999988765 36 4689999754
No 342
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=54.61 E-value=9.8 Score=40.05 Aligned_cols=35 Identities=29% Similarity=0.400 Sum_probs=28.5
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
.+.+|+|+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAAS-----YG-------AKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TS-------CCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHH-----CC-------CcEEEEeCCC
Confidence 35789999999999999998865 25 4799999863
No 343
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=54.48 E-value=21 Score=36.82 Aligned_cols=89 Identities=8% Similarity=0.096 Sum_probs=53.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccc--cCCCCCHHHHhcc
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE--HEPVNNLLDAVKV 409 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~--~~~~~~L~e~V~~ 409 (592)
.||.|+|+|..|..+|..+... | .+++++|++- +.+. .|.. .....++.|+++.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~-----G-------~~V~~~dr~~-------~~~~-----~a~~~G~~~~~~~~e~~~~ 64 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA-----N-------HSVFGYNRSR-------SGAK-----SAVDEGFDVSADLEATLQR 64 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSCH-------HHHH-----HHHHTTCCEESCHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CEEEEEeCCH-------HHHH-----HHHHcCCeeeCCHHHHHHh
Confidence 5899999999999999988653 5 4688888641 1111 1111 1112467777764
Q ss_pred c--CCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecC
Q 007703 410 I--KPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 410 v--kPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
. .+|++| ++.+.. -++++++.++.+.+ .-||.=.|
T Consensus 65 a~~~aDlVi-lavP~~-~~~~vl~~l~~~~~-~~iv~Dv~ 101 (341)
T 3ktd_A 65 AAAEDALIV-LAVPMT-AIDSLLDAVHTHAP-NNGFTDVV 101 (341)
T ss_dssp HHHTTCEEE-ECSCHH-HHHHHHHHHHHHCT-TCCEEECC
T ss_pred cccCCCEEE-EeCCHH-HHHHHHHHHHccCC-CCEEEEcC
Confidence 2 467766 444332 46677777766544 44554443
No 344
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=54.37 E-value=30 Score=33.66 Aligned_cols=78 Identities=21% Similarity=0.286 Sum_probs=44.5
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc----------c
Q 007703 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----------E 396 (592)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~----------~ 396 (592)
.+|+++++||.||++ ||..-++..+.+ .| -+++++|++ . +.+...+..+.. |
T Consensus 28 ~~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~~~~D 89 (276)
T 3r1i_A 28 FDLSGKRALITGAST---GIGKKVALAYAE-AG-------AQVAVAARH----S---DALQVVADEIAGVGGKALPIRCD 89 (276)
T ss_dssp GCCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESS----G---GGGHHHHHHHHHTTCCCEEEECC
T ss_pred cCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC----H---HHHHHHHHHHHhcCCeEEEEEcC
Confidence 357889999999864 444455555554 36 368888874 1 123332222221 1
Q ss_pred cCCCCCHHHHhccc-----CCcEEEeccCCC
Q 007703 397 HEPVNNLLDAVKVI-----KPTILIGSSGVG 422 (592)
Q Consensus 397 ~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 422 (592)
-....++.++++.+ ++|+||=..+..
T Consensus 90 l~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 120 (276)
T 3r1i_A 90 VTQPDQVRGMLDQMTGELGGIDIAVCNAGIV 120 (276)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 11123455666655 799999776654
No 345
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=54.30 E-value=10 Score=41.21 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=28.7
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999998865 363 689999864
No 346
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=54.29 E-value=9.5 Score=36.19 Aligned_cols=78 Identities=24% Similarity=0.339 Sum_probs=43.5
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhc-------cccCC
Q 007703 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-------HEHEP 399 (592)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA-------~~~~~ 399 (592)
.++++.++||.||++ ||...++..+.+ .| .+++++|++- +.+...+..+. -|-..
T Consensus 5 m~l~~k~vlITGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~~ 66 (261)
T 3n74_A 5 MSLEGKVALITGAGS---GFGEGMAKRFAK-GG-------AKVVIVDRDK-------AGAERVAGEIGDAALAVAADISK 66 (261)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHHHCTTEEEEECCTTS
T ss_pred ccCCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEcCCH-------HHHHHHHHHhCCceEEEEecCCC
Confidence 467889999999864 333444444444 36 3688888741 11222222211 11112
Q ss_pred CCCHHHHhccc-----CCcEEEeccCCC
Q 007703 400 VNNLLDAVKVI-----KPTILIGSSGVG 422 (592)
Q Consensus 400 ~~~L~e~V~~v-----kPtvLIG~S~~~ 422 (592)
..++.++++.+ ++|+||=..+..
T Consensus 67 ~~~~~~~~~~~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 67 EADVDAAVEAALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 23455666655 899999777654
No 347
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=54.19 E-value=15 Score=40.38 Aligned_cols=37 Identities=11% Similarity=0.286 Sum_probs=30.0
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCc
Q 007703 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (592)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (592)
+++.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar-----~G~-------~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHK-----LGH-------DVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHc-----CCC-------CEEEEcCCCC
Confidence 557899999999999999987765 363 6899998844
No 348
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=54.18 E-value=8.3 Score=36.83 Aligned_cols=84 Identities=23% Similarity=0.353 Sum_probs=54.1
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 007703 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (592)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 410 (592)
.||+|.|| |-.|..+++.|++ .| .+++.+++. ..| +.. ..++.++++..
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~D-~~d-----------~~~~~~~~~~~ 55 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNP-----EE-------YDIYPFDKK------LLD-ITN-----------ISQVQQVVQEI 55 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCT-----TT-------EEEEEECTT------TSC-TTC-----------HHHHHHHHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CC-------CEEEEeccc------ccC-CCC-----------HHHHHHHHHhc
Confidence 38999997 8778777776643 24 468888871 111 221 13577788877
Q ss_pred CCcEEEeccCCCCC----------------CCHHHHHHHHccCCCCceEEecC
Q 007703 411 KPTILIGSSGVGRT----------------FTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 411 kPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
++|++|=+.+.... .+..+++++.+..- | +||.=|
T Consensus 56 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~v~~SS 106 (287)
T 3sc6_A 56 RPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-K-LVYIST 106 (287)
T ss_dssp CCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-E-EEEEEE
T ss_pred CCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-e-EEEEch
Confidence 89999988775531 03457777776555 5 777544
No 349
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=54.16 E-value=18 Score=36.10 Aligned_cols=31 Identities=29% Similarity=0.502 Sum_probs=24.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (592)
+||-|+|-|..|.++|..|+.. |. +++.+|+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-----G~-------~V~v~dr 36 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-----GY-------ELVVWNR 36 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEC--
T ss_pred CcEEEEecHHHHHHHHHHHHHC-----CC-------eEEEEeC
Confidence 5899999999999999988763 63 6777776
No 350
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=54.11 E-value=8.8 Score=39.64 Aligned_cols=39 Identities=15% Similarity=0.261 Sum_probs=28.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhc-CcEEEEccCCc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETR-KKICLVDSKGL 377 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~-~~i~lvD~~GL 377 (592)
..+|||+|||.||+..|..|.+. |. +.. -++.++|+..-
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~-----g~---~~~~~~v~liE~~~~ 69 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQER-----AQ---AQGALEVLFLDKQGD 69 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHH-----HH---HHCCCCEEEEESCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhc-----cc---ccCcccEEEEecCCC
Confidence 35799999999999999988764 31 000 47889988753
No 351
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=54.06 E-value=48 Score=31.81 Aligned_cols=76 Identities=16% Similarity=0.271 Sum_probs=40.9
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHh
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V 407 (592)
+|++.++||.||++ ||...++..+.+ .| .+++++|++. .+...... +.-|-....++.+++
T Consensus 5 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~~~~~~~~----~~~Dl~~~~~v~~~~ 65 (264)
T 2dtx_A 5 DLRDKVVIVTGASM---GIGRAIAERFVD-EG-------SKVIDLSIHD----PGEAKYDH----IECDVTNPDQVKASI 65 (264)
T ss_dssp GGTTCEEEEESCSS---HHHHHHHHHHHH-TT-------CEEEEEESSC----CCSCSSEE----EECCTTCHHHHHHHH
T ss_pred ccCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEecCc----ccCCceEE----EEecCCCHHHHHHHH
Confidence 36778999999753 444555555554 36 3688887742 11111111 111111223455555
Q ss_pred ccc-----CCcEEEeccCCC
Q 007703 408 KVI-----KPTILIGSSGVG 422 (592)
Q Consensus 408 ~~v-----kPtvLIG~S~~~ 422 (592)
+.+ ++|+||=..+..
T Consensus 66 ~~~~~~~g~iD~lv~~Ag~~ 85 (264)
T 2dtx_A 66 DHIFKEYGSISVLVNNAGIE 85 (264)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHcCCCCEEEECCCCC
Confidence 544 799999776654
No 352
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=53.89 E-value=27 Score=35.55 Aligned_cols=92 Identities=13% Similarity=0.077 Sum_probs=50.3
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc----ccCCCCCHHHH
Q 007703 332 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----EHEPVNNLLDA 406 (592)
Q Consensus 332 ~riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~----~~~~~~~L~e~ 406 (592)
.||+++| .|..|--+++.+.+. .++ +=...+|+++--..++ + +. .++- .-+-..+|.++
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~----~~~------eLvg~vd~~~~~~~G~-d-~g----el~G~~~~gv~v~~dl~~l 85 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRR----KDV------ELCAVLVRKGSSFVDK-D-AS----ILIGSDFLGVRITDDPESA 85 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTC----SSE------EEEEEBCCTTCTTTTS-B-GG----GGTTCSCCSCBCBSCHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhC----CCC------EEEEEEecCCcccccc-c-hH----HhhccCcCCceeeCCHHHH
Confidence 5999999 899998888877542 232 2244567654211111 0 11 1111 11122589888
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEe
Q 007703 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILA 445 (592)
Q Consensus 407 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFa 445 (592)
+. +|||+|=.|.+.. +.+.++...++ . .|+|..
T Consensus 86 l~--~aDVvIDFT~p~a--~~~~~~~~l~~-G-v~vViG 118 (288)
T 3ijp_A 86 FS--NTEGILDFSQPQA--SVLYANYAAQK-S-LIHIIG 118 (288)
T ss_dssp TT--SCSEEEECSCHHH--HHHHHHHHHHH-T-CEEEEC
T ss_pred hc--CCCEEEEcCCHHH--HHHHHHHHHHc-C-CCEEEE
Confidence 86 6999998775321 23444444443 3 566653
No 353
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=53.86 E-value=26 Score=32.79 Aligned_cols=38 Identities=21% Similarity=0.260 Sum_probs=25.0
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
..++++++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 10 ~~l~~k~vlITGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 47 (247)
T 3i1j_A 10 ELLKGRVILVTGAAR---GIGAAAARAYAA-HG-------ASVVLLGRT 47 (247)
T ss_dssp TTTTTCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred ccCCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEecC
Confidence 357889999999853 444445555544 36 368888874
No 354
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=53.69 E-value=6.8 Score=39.87 Aligned_cols=88 Identities=16% Similarity=0.135 Sum_probs=48.3
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhc
Q 007703 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 408 (592)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~ 408 (592)
....||.|+|+|..|...++.+.. +..|. +-+.++|++ ..+ .....+.|--......++.|+++
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~---~~~~~------~lvav~d~~----~~~---~~~~a~~~g~~~~~~~~~~~ll~ 84 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLAN---TVSGV------EVVAVCDIV----AGR---AQAALDKYAIEAKDYNDYHDLIN 84 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH---TCTTE------EEEEEECSS----TTH---HHHHHHHHTCCCEEESSHHHHHH
T ss_pred CCeeeEEEECCcHHHHHHHHHHHh---hCCCc------EEEEEEeCC----HHH---HHHHHHHhCCCCeeeCCHHHHhc
Confidence 345699999999988766555432 11121 223466653 111 22222222111122478999999
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHH
Q 007703 409 VIKPTILIGSSGVGRTFTKEVIEAMA 434 (592)
Q Consensus 409 ~vkPtvLIG~S~~~g~Ft~evv~~Ma 434 (592)
.-++|+++ +++.. .+..+++....
T Consensus 85 ~~~~D~V~-i~tp~-~~h~~~~~~al 108 (357)
T 3ec7_A 85 DKDVEVVI-ITASN-EAHADVAVAAL 108 (357)
T ss_dssp CTTCCEEE-ECSCG-GGHHHHHHHHH
T ss_pred CCCCCEEE-EcCCc-HHHHHHHHHHH
Confidence 87899988 55544 45555555443
No 355
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=53.68 E-value=13 Score=35.46 Aligned_cols=37 Identities=16% Similarity=0.289 Sum_probs=23.6
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+|+++++||.||++ ||...++..+.+ .| .+++++|++
T Consensus 2 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 38 (254)
T 1hdc_A 2 DLSGKTVIITGGAR---GLGAEAARQAVA-AG-------ARVVLADVL 38 (254)
T ss_dssp CCCCSEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 46788999999843 444444444444 36 368888764
No 356
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=53.65 E-value=12 Score=36.14 Aligned_cols=78 Identities=12% Similarity=0.116 Sum_probs=43.5
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhc-------cccCC
Q 007703 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-------HEHEP 399 (592)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA-------~~~~~ 399 (592)
.+|+++++||.||++ ||..-++..+.+ .| .+++++|++- +.+......+. -|-..
T Consensus 7 ~~l~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~~ 68 (271)
T 3tzq_B 7 AELENKVAIITGACG---GIGLETSRVLAR-AG-------ARVVLADLPE-------TDLAGAAASVGRGAVHHVVDLTN 68 (271)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEECTT-------SCHHHHHHHHCTTCEEEECCTTC
T ss_pred cCCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEcCCH-------HHHHHHHHHhCCCeEEEECCCCC
Confidence 367889999999853 444445555544 36 3688888741 12322222211 01112
Q ss_pred CCCHHHHhccc-----CCcEEEeccCCC
Q 007703 400 VNNLLDAVKVI-----KPTILIGSSGVG 422 (592)
Q Consensus 400 ~~~L~e~V~~v-----kPtvLIG~S~~~ 422 (592)
..++.++++.+ +.|+||=..+..
T Consensus 69 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 69 EVSVRALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455556554 799999777654
No 357
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=53.57 E-value=11 Score=35.45 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=26.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+.+|+|+|||.+|+-.|..+.+ .| .++.++++.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~-----~g-------~~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQ-----KG-------VRVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CC-------CCEEEEecC
Confidence 4579999999999999988765 25 468888875
No 358
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=53.52 E-value=15 Score=36.94 Aligned_cols=58 Identities=21% Similarity=0.145 Sum_probs=35.5
Q ss_pred cCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc
Q 007703 305 DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (592)
Q Consensus 305 DDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (592)
++.++.....++..+.+++..+.+ .+++|+|.|||..|...+.+.. ..|. ++++.+|+
T Consensus 155 s~~~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak-----~~Ga------~~Vi~~~~ 212 (363)
T 3m6i_A 155 SYENGAMLEPLSVALAGLQRAGVR-LGDPVLICGAGPIGLITMLCAK-----AAGA------CPLVITDI 212 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCC-TTCCEEEECCSHHHHHHHHHHH-----HTTC------CSEEEEES
T ss_pred CHHHHHhhhHHHHHHHHHHHcCCC-CCCEEEEECCCHHHHHHHHHHH-----HcCC------CEEEEECC
Confidence 333444443455566677655543 4679999999877765554332 2474 56888875
No 359
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=53.50 E-value=12 Score=38.05 Aligned_cols=32 Identities=22% Similarity=0.377 Sum_probs=25.9
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
+|+|+|||.+|+..|-.|.+ .| .++.++++..
T Consensus 2 dVvVIGaGiaGLsaA~~La~-----~G-------~~V~vlE~~~ 33 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLAR-----NG-------HEIIVLEKSA 33 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHH-----TT-------CEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 79999999999999988865 26 3688888754
No 360
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=53.38 E-value=14 Score=39.19 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=26.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD 373 (592)
+.+++|+|||.||+..|..+.+. .| .++.++|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATL----YG-------KRVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHh----cC-------CeEEEEe
Confidence 46899999999999999988751 15 4789999
No 361
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=53.26 E-value=11 Score=38.78 Aligned_cols=35 Identities=20% Similarity=0.290 Sum_probs=27.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
++|||+|||.||+..|..|.+. . .| .++.++|++-
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~--~-~g-------~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL--M-PD-------LKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH--C-TT-------CEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcC--C-CC-------CeEEEECCCC
Confidence 5899999999999999988761 0 13 4788888764
No 362
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=53.25 E-value=12 Score=37.78 Aligned_cols=32 Identities=16% Similarity=0.228 Sum_probs=25.9
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
+|+|+|||.+|+..|-.|.+ .| .++.++++..
T Consensus 2 dVvVIGaGiaGLsaA~~La~-----~G-------~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSK-----AG-------HEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHH-----TT-------CEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHh-----CC-------CceEEEeCCC
Confidence 69999999999999988865 25 4677787753
No 363
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=52.99 E-value=33 Score=32.93 Aligned_cols=76 Identities=11% Similarity=0.035 Sum_probs=41.5
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhc-cccCCCCCHHHHh
Q 007703 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-HEHEPVNNLLDAV 407 (592)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA-~~~~~~~~L~e~V 407 (592)
++++++||.||++ ||...++..+.+ .| .+++++|++- .+ +...+..+. -|-....++.+++
T Consensus 26 ~~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~----~~---~~~~~~~~~~~Dv~d~~~v~~~~ 87 (260)
T 3un1_A 26 NQQKVVVITGASQ---GIGAGLVRAYRD-RN-------YRVVATSRSI----KP---SADPDIHTVAGDISKPETADRIV 87 (260)
T ss_dssp TTCCEEEESSCSS---HHHHHHHHHHHH-TT-------CEEEEEESSC----CC---CSSTTEEEEESCTTSHHHHHHHH
T ss_pred cCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----hh---cccCceEEEEccCCCHHHHHHHH
Confidence 5678999999753 444444444444 36 3688888751 11 111111111 1222223455556
Q ss_pred ccc-----CCcEEEeccCCC
Q 007703 408 KVI-----KPTILIGSSGVG 422 (592)
Q Consensus 408 ~~v-----kPtvLIG~S~~~ 422 (592)
+.+ ++|+||=..+..
T Consensus 88 ~~~~~~~g~iD~lv~nAg~~ 107 (260)
T 3un1_A 88 REGIERFGRIDSLVNNAGVF 107 (260)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHCCCCCEEEECCCCC
Confidence 554 799999777654
No 364
>1tzb_A Glucose-6-phosphate isomerase, conjectural; enzyme, crenarchaeon, hyperthermophIle, PGI family; 1.16A {Pyrobaculum aerophilum} SCOP: c.80.1.1 PDB: 1tzc_A* 1x9h_A* 1x9i_A*
Probab=52.91 E-value=34 Score=34.10 Aligned_cols=64 Identities=23% Similarity=0.231 Sum_probs=42.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhc-CCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQT-KAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~-G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~ 409 (592)
..||+|+|.|+++. +|..+...+.+.. | ..+++.... + + +
T Consensus 37 ~~~I~i~G~G~S~~-~a~~~~~~l~~~~~~-------~~~~~~~~~--------~-~--------------------~-- 77 (302)
T 1tzb_A 37 MPRLYISGMGGSGV-VADLIRDFSLTWNWE-------VEVIAVKDY--------F-L--------------------K-- 77 (302)
T ss_dssp CSEEEEECCHHHHH-HHHHHHHHHHHTTCS-------SEEEEECSS--------C-C--------------------C--
T ss_pred CCEEEEEEecHHHH-HHHHHHHHHHhhcCC-------ceEEEeCCc--------C-C--------------------C--
Confidence 46999999999875 6666655554322 2 233333111 0 1 1
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHc
Q 007703 410 IKPTILIGSSGVGRTFTKEVIEAMAS 435 (592)
Q Consensus 410 vkPtvLIG~S~~~g~Ft~evv~~Ma~ 435 (592)
-+.|++|++|-.|. |+|+++++..
T Consensus 78 ~~~dlvI~iS~SG~--T~e~~~a~~~ 101 (302)
T 1tzb_A 78 ARDGLLIAVSYSGN--TIETLYTVEY 101 (302)
T ss_dssp CSSSEEEEECSSSC--CHHHHHHHHH
T ss_pred CCCCEEEEEeCCCC--CHHHHHHHHH
Confidence 35789999999886 9999998864
No 365
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=52.75 E-value=43 Score=31.76 Aligned_cols=77 Identities=14% Similarity=0.134 Sum_probs=42.1
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHH
Q 007703 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (592)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 406 (592)
.++++.++||.||++ ||...++..+.+ .| .+++++|++- ...+.+. +..+.-|- ..++.++
T Consensus 15 ~~~~~k~vlVTGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~----~~~~~~~--~~~~~~D~--~~~~~~~ 75 (249)
T 1o5i_A 15 LGIRDKGVLVLAASR---GIGRAVADVLSQ-EG-------AEVTICARNE----ELLKRSG--HRYVVCDL--RKDLDLL 75 (249)
T ss_dssp -CCTTCEEEEESCSS---HHHHHHHHHHHH-TT-------CEEEEEESCH----HHHHHTC--SEEEECCT--TTCHHHH
T ss_pred hccCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEcCCH----HHHHhhC--CeEEEeeH--HHHHHHH
Confidence 468889999999853 444444454444 36 3588888753 0000010 00110111 2356666
Q ss_pred hccc-CCcEEEeccCCC
Q 007703 407 VKVI-KPTILIGSSGVG 422 (592)
Q Consensus 407 V~~v-kPtvLIG~S~~~ 422 (592)
++.+ ++|+||=..+..
T Consensus 76 ~~~~~~iD~lv~~Ag~~ 92 (249)
T 1o5i_A 76 FEKVKEVDILVLNAGGP 92 (249)
T ss_dssp HHHSCCCSEEEECCCCC
T ss_pred HHHhcCCCEEEECCCCC
Confidence 6655 799999777653
No 366
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=52.73 E-value=12 Score=39.09 Aligned_cols=33 Identities=18% Similarity=0.195 Sum_probs=27.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 34 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ-----LG-------MKTACVEKR 34 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCC
Confidence 3579999999999999987754 25 378999987
No 367
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=52.50 E-value=11 Score=35.78 Aligned_cols=98 Identities=15% Similarity=0.089 Sum_probs=53.7
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 007703 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (592)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~v 410 (592)
||+|.|| |-.|..+++.|++. ..| .+++.++++. ++...+......+.. +-.+..++.++++.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~- 65 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKT---VPA-------SQIVAIVRNP----AKAQALAAQGITVRQADYGDEAALTSALQG- 65 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTCHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred CEEEEcCCchHHHHHHHHHHhh---CCC-------ceEEEEEcCh----HhhhhhhcCCCeEEEcCCCCHHHHHHHHhC-
Confidence 5889997 77777777766431 002 4688887641 110001110111111 11222457777775
Q ss_pred CCcEEEeccCCCC----CCCHHHHHHHHccCCCCceEEecC
Q 007703 411 KPTILIGSSGVGR----TFTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 411 kPtvLIG~S~~~g----~Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
+|++|=+++... ..+..++++|.+..- +.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~-~~~v~~Ss 104 (286)
T 2zcu_A 66 -VEKLLLISSSEVGQRAPQHRNVINAAKAAGV-KFIAYTSL 104 (286)
T ss_dssp -CSEEEECC--------CHHHHHHHHHHHHTC-CEEEEEEE
T ss_pred -CCEEEEeCCCCchHHHHHHHHHHHHHHHcCC-CEEEEECC
Confidence 799998776421 237788999887665 77887544
No 368
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=52.45 E-value=4.5 Score=42.89 Aligned_cols=25 Identities=28% Similarity=0.436 Sum_probs=21.2
Q ss_pred cccceEEEeCcChHHHHHHHHHHHH
Q 007703 329 LAEHRFLFLGAGEAGTGIAELIALE 353 (592)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~ 353 (592)
....+|+|+|||.||+..|..|.++
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~ 30 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQN 30 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhc
Confidence 3457899999999999999988763
No 369
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=52.35 E-value=11 Score=36.20 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=24.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.+|+|+|||.||+..|..+.+ .|. ++.+++.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR-----KGI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 479999999999999987754 253 56777653
No 370
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=52.27 E-value=17 Score=35.73 Aligned_cols=81 Identities=11% Similarity=0.198 Sum_probs=44.5
Q ss_pred CCCcccceEEEeCcCh---HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhh------ccc
Q 007703 326 GGTLAEHRFLFLGAGE---AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW------AHE 396 (592)
Q Consensus 326 g~~l~d~riv~~GAGs---Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~f------A~~ 396 (592)
..+|+++++||.||++ .|..||+.+++ .| -+++++|++. ...+.+......+ .-|
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~-----~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~D 88 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCA-----QG-------AEVALTYLSE----TFKKRVDPLAESLGVKLTVPCD 88 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESSG----GGHHHHHHHHHHHTCCEEEECC
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHH-----CC-------CEEEEEeCCh----HHHHHHHHHHHhcCCeEEEEcC
Confidence 3468889999999963 44446666654 36 3588888751 1101111111111 011
Q ss_pred cCCCCCHHHHhccc-----CCcEEEeccCCC
Q 007703 397 HEPVNNLLDAVKVI-----KPTILIGSSGVG 422 (592)
Q Consensus 397 ~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 422 (592)
-....++.++++.+ +.|+||=..+..
T Consensus 89 v~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 119 (296)
T 3k31_A 89 VSDAESVDNMFKVLAEEWGSLDFVVHAVAFS 119 (296)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 11223455566655 799999777654
No 371
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=52.22 E-value=12 Score=38.93 Aligned_cols=33 Identities=27% Similarity=0.291 Sum_probs=26.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
-+++|+|||.||+..|..+.+ .| .++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g-------~~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQ-----LG-------MKVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 479999999999999987754 25 4789999863
No 372
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=52.22 E-value=27 Score=33.37 Aligned_cols=77 Identities=14% Similarity=0.150 Sum_probs=42.9
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc----------cc
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----------EH 397 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~----------~~ 397 (592)
++++.++||.||++ ||..-++..+.+ .| -+++++|++. +.+...+..+.. |-
T Consensus 4 ~~~~k~vlVTGas~---GIG~aia~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~Dv 65 (252)
T 3h7a_A 4 TPRNATVAVIGAGD---YIGAEIAKKFAA-EG-------FTVFAGRRNG-------EKLAPLVAEIEAAGGRIVARSLDA 65 (252)
T ss_dssp -CCSCEEEEECCSS---HHHHHHHHHHHH-TT-------CEEEEEESSG-------GGGHHHHHHHHHTTCEEEEEECCT
T ss_pred CCCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHHHhcCCeEEEEECcC
Confidence 56788999999864 455555555554 36 3688888741 123322222211 11
Q ss_pred CCCCCHHHHhccc----CCcEEEeccCCC
Q 007703 398 EPVNNLLDAVKVI----KPTILIGSSGVG 422 (592)
Q Consensus 398 ~~~~~L~e~V~~v----kPtvLIG~S~~~ 422 (592)
....++.++++.+ ++|+||=..+..
T Consensus 66 ~~~~~v~~~~~~~~~~g~id~lv~nAg~~ 94 (252)
T 3h7a_A 66 RNEDEVTAFLNAADAHAPLEVTIFNVGAN 94 (252)
T ss_dssp TCHHHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred CCHHHHHHHHHHHHhhCCceEEEECCCcC
Confidence 1123455555554 789999766653
No 373
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=52.17 E-value=11 Score=39.51 Aligned_cols=35 Identities=20% Similarity=0.327 Sum_probs=27.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (592)
+.+|+|+|||.||+..|..+.+ .| .++.++|+..-
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~-----~G-------~~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGK-----RG-------RRVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CC-------CcEEEEeCCCC
Confidence 4589999999999999987764 36 36889998654
No 374
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=52.16 E-value=12 Score=36.27 Aligned_cols=32 Identities=22% Similarity=0.341 Sum_probs=24.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
--|+|+|||+||+-.|..+.+ .| .++.++|+.
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~-----~g-------~~V~liE~~ 38 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASR-----AN-------LKTVMIERG 38 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEecC
Confidence 358999999999998876654 36 368888864
No 375
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=52.14 E-value=25 Score=35.70 Aligned_cols=45 Identities=20% Similarity=0.200 Sum_probs=28.7
Q ss_pred HHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc
Q 007703 319 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (592)
Q Consensus 319 l~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (592)
+.|+......-.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 182 ~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~-----~Ga------~~Vi~~~~ 226 (378)
T 3uko_A 182 LGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKT-----AGA------SRIIGIDI 226 (378)
T ss_dssp HHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECS
T ss_pred HHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 3344333444467899999999877665554432 364 57888875
No 376
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=52.13 E-value=13 Score=36.68 Aligned_cols=101 Identities=13% Similarity=0.204 Sum_probs=57.3
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhch----------hhcc-c
Q 007703 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK----------PWAH-E 396 (592)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~----------~fA~-~ 396 (592)
++..+|+|.|| |-.|..+++.|++ .| .+++.+|+.- ....+.+...+. .+.. +
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~D 89 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLK-----LD-------QKVVGLDNFA---TGHQRNLDEVRSLVSEKQWSNFKFIQGD 89 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCHHHHHHHHHHSCHHHHTTEEEEECC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCC---ccchhhHHHHhhhcccccCCceEEEECC
Confidence 55679999998 7777777777654 25 3688888742 110011211111 1111 1
Q ss_pred cCCCCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHccCCCCceEEecC
Q 007703 397 HEPVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 397 ~~~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
-....++.++++ ++|++|=+.+..+. -|..+++++.+..- +-|||.=|
T Consensus 90 l~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~~v~~SS 153 (352)
T 1sb8_A 90 IRNLDDCNNACA--GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKV-QSFTYAAS 153 (352)
T ss_dssp TTSHHHHHHHHT--TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-SEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCC-CEEEEecc
Confidence 112235667777 69999988876431 13456677766544 66887544
No 377
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=52.11 E-value=25 Score=34.94 Aligned_cols=108 Identities=23% Similarity=0.241 Sum_probs=56.5
Q ss_pred CCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcc---cCCCccCCchhc------hhhcc-
Q 007703 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI---VSSRKDSLQHFK------KPWAH- 395 (592)
Q Consensus 327 ~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv---~~~R~~~l~~~k------~~fA~- 395 (592)
..+++.+|+|.|| |-.|..+++.|++. ..| .+++.+|+..-- ...+.+.+.... ..+..
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~---~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQEN---HPK-------AKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAA 75 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHH---CTT-------SEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEEC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhh---CCC-------CeEEEEECCCccccccccchhhhhhhhhccccCceEEEC
Confidence 3577889999986 77777777766541 024 478888874210 000001111111 01111
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCCCC--------------CCHHHHHHHHccCCCCceEEecC
Q 007703 396 EHEPVNNLLDAVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 396 ~~~~~~~L~e~V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
+-....++.++ ...++|++|=+.+.... -|..+++++.+..- + |||.=|
T Consensus 76 Dl~d~~~~~~~-~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~-~-~V~~SS 138 (362)
T 3sxp_A 76 DINNPLDLRRL-EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKA-K-VIYASS 138 (362)
T ss_dssp CTTCHHHHHHH-TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTC-E-EEEEEE
T ss_pred CCCCHHHHHHh-hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCC-c-EEEeCc
Confidence 11111234444 33479999977764431 13456777766555 6 888655
No 378
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=52.02 E-value=90 Score=31.99 Aligned_cols=134 Identities=13% Similarity=0.146 Sum_probs=85.1
Q ss_pred HHHHHHHHHhcCCCeeeeeecCCCchHHHHHHHHcCCCceec--cCCcchHHHHHHHHHHHHHHhCCCcc-cceEEEeCc
Q 007703 263 DEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLA-EHRFLFLGA 339 (592)
Q Consensus 263 defv~av~~~fGp~~lIqfEDf~~~~Af~lL~ryr~~~~~FN--DDiQGTaaV~LAgll~Alr~~g~~l~-d~riv~~GA 339 (592)
...+. +-.+| .++++ +-.++ +.+.+.|.+|- ++||.| || .---.=+||=++.-.+.. ++++ +.||+++|-
T Consensus 82 ~DTar-vls~~-~D~iv-iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~-g~l~~gl~va~vGD 154 (307)
T 3tpf_A 82 KDTAR-VIGAM-VDFVM-MRVNK-HETLLEFARYS-KAPVINALSE-LYHPTQVLGDLFTIKEWN-KMQNGIAKVAFIGD 154 (307)
T ss_dssp HHHHH-HHHHH-SSEEE-EECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHTT-CCGGGCCEEEEESC
T ss_pred HHHHH-HHHHh-CCEEE-EecCC-hHHHHHHHHhC-CCCEEeCCCC-CcCcHHHHHHHHHHHHHh-CCCCCCCEEEEEcC
Confidence 33444 34456 55443 55454 45666677765 689998 65 455566777777655554 4799 999999999
Q ss_pred ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcccc----CCCCCHHHHhcccCCcEE
Q 007703 340 GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTIL 415 (592)
Q Consensus 340 GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~----~~~~~L~e~V~~vkPtvL 415 (592)
|. -+|+-++.++.+ .|+ +|.++-.+|+.-.. .+-...+.+|+.. ....++.|+|+. .||+
T Consensus 155 ~~---~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~g~~~~~~~d~~eav~~--aDvv 218 (307)
T 3tpf_A 155 SN---NMCNSWLITAAI-LGF-------EISIAMPKNYKISP---EIWEFAMKQALISGAKISLGYDKFEALKD--KDVV 218 (307)
T ss_dssp SS---HHHHHHHHHHHH-HTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHTCEEEEESCHHHHHTT--CSEE
T ss_pred CC---ccHHHHHHHHHH-cCC-------EEEEECCCccCCCH---HHHHHHHHHHHHcCCeEEEEcCHHHHhcC--CCEE
Confidence 73 488888887776 474 68888888874321 1111122333321 123689999997 9999
Q ss_pred Eecc
Q 007703 416 IGSS 419 (592)
Q Consensus 416 IG~S 419 (592)
.-..
T Consensus 219 yt~~ 222 (307)
T 3tpf_A 219 ITDT 222 (307)
T ss_dssp EECC
T ss_pred EecC
Confidence 8654
No 379
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=51.84 E-value=11 Score=40.23 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=28.5
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
.+.+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-----G-------GRQLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCCC
Confidence 356899999999999999888652 5 4689999864
No 380
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=51.73 E-value=28 Score=35.35 Aligned_cols=49 Identities=16% Similarity=0.198 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc
Q 007703 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (592)
Q Consensus 314 ~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (592)
+....+.+++..+....+++++|.|||..|..++.++.. .|. +++.+|+
T Consensus 171 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~-----~Ga-------~Vi~~~~ 219 (366)
T 1yqd_A 171 AGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKA-----FGS-------KVTVIST 219 (366)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred hHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 334445677766655478999999998877766655432 362 5777775
No 381
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=51.60 E-value=9.4 Score=37.58 Aligned_cols=101 Identities=13% Similarity=0.184 Sum_probs=59.5
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhch----------hhcc-c
Q 007703 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK----------PWAH-E 396 (592)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~----------~fA~-~ 396 (592)
+...+|+|.|| |-.|..+++.|++ .| .+++.+|+..- .....+...+. .+.. +
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D 87 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLK-----LN-------QVVIGLDNFST---GHQYNLDEVKTLVSTEQWSRFCFIEGD 87 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS---CCHHHHHHHHHTSCHHHHTTEEEEECC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCCC---CchhhhhhhhhccccccCCceEEEEcc
Confidence 45689999996 8888888777764 25 46888877421 10001111110 1111 1
Q ss_pred cCCCCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHccCCCCceEEecC
Q 007703 397 HEPVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 397 ~~~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
.....++.++++ ++|++|=+.+.... -|..+++++.+..- +.+||.=|
T Consensus 88 l~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~v~~SS 151 (351)
T 3ruf_A 88 IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQV-QSFTYAAS 151 (351)
T ss_dssp TTCHHHHHHHTT--TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-SEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCC-CEEEEEec
Confidence 112235777777 69999988875421 13447888887666 78888643
No 382
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=51.60 E-value=37 Score=33.68 Aligned_cols=55 Identities=20% Similarity=0.248 Sum_probs=31.6
Q ss_pred cchHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc
Q 007703 308 QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (592)
Q Consensus 308 QGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (592)
++...-.++..+.+.+..+ .-.+++++|.|||..|...+. ++.+ .|. +.+..+|+
T Consensus 139 ~aa~l~~~~~~~~~~~~~~-~~~g~~VlV~GaG~vG~~aiq-~ak~----~G~------~~vi~~~~ 193 (346)
T 4a2c_A 139 DGAFIEPITVGLHAFHLAQ-GCENKNVIIIGAGTIGLLAIQ-CAVA----LGA------KSVTAIDI 193 (346)
T ss_dssp GGGGHHHHHHHHHHHHHTT-CCTTSEEEEECCSHHHHHHHH-HHHH----TTC------SEEEEEES
T ss_pred HHHhchHHHHHHHHHHHhc-cCCCCEEEEECCCCcchHHHH-HHHH----cCC------cEEEEEec
Confidence 4443333444444454443 346789999999987754443 3332 364 56676765
No 383
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=51.51 E-value=17 Score=34.04 Aligned_cols=101 Identities=20% Similarity=0.153 Sum_probs=54.5
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc-ccCCCCCHHHH
Q 007703 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 406 (592)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~ 406 (592)
..-.+|+|.|| |-.|..|++.|++ .|- .++.+++++. ++...+......+.. |-.+..++.++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~-----~G~------~~V~~~~R~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 85 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLAD-----KQT------IKQTLFARQP----AKIHKPYPTNSQIIMGDVLNHAALKQA 85 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTT-----CTT------EEEEEEESSG----GGSCSSCCTTEEEEECCTTCHHHHHHH
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHh-----CCC------ceEEEEEcCh----hhhcccccCCcEEEEecCCCHHHHHHH
Confidence 33468999995 6677777666643 241 3677777642 111111111111111 22222457777
Q ss_pred hcccCCcEEEeccCCCCC--CCHHHHHHHHccCCCCceEEecC
Q 007703 407 VKVIKPTILIGSSGVGRT--FTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 407 V~~vkPtvLIG~S~~~g~--Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
++. .|++|=+.+.... -++.+++.|.+..- +-|||.=|
T Consensus 86 ~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~~~~-~~iV~iSS 125 (236)
T 3qvo_A 86 MQG--QDIVYANLTGEDLDIQANSVIAAMKACDV-KRLIFVLS 125 (236)
T ss_dssp HTT--CSEEEEECCSTTHHHHHHHHHHHHHHTTC-CEEEEECC
T ss_pred hcC--CCEEEEcCCCCchhHHHHHHHHHHHHcCC-CEEEEEec
Confidence 875 7999966554332 25677888876554 55666444
No 384
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=51.43 E-value=14 Score=40.99 Aligned_cols=34 Identities=24% Similarity=0.450 Sum_probs=28.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
..+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~-----G-------~~V~liE~~~ 424 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR-----G-------YDVVLAEAGR 424 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----T-------CEEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCC
Confidence 46899999999999999988653 5 4699999863
No 385
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=51.30 E-value=6.4 Score=42.28 Aligned_cols=32 Identities=19% Similarity=0.369 Sum_probs=24.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.||||+|+|.||+-.|+.|.. .+ -+|.|+|++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 489999999999988876531 12 369999985
No 386
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=51.29 E-value=14 Score=38.21 Aligned_cols=23 Identities=30% Similarity=0.455 Sum_probs=19.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHH
Q 007703 331 EHRFLFLGAGEAGTGIAELIALE 353 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~ 353 (592)
+--|+|+|||-||+..|..|.++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~ 32 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQI 32 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhh
Confidence 45799999999999999988653
No 387
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=51.21 E-value=10 Score=39.50 Aligned_cols=33 Identities=21% Similarity=0.434 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+.+++|+|||.||+..|..+.+ .| .++.++|++
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAM-----YG-------QKCALIEAK 36 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEcCC
Confidence 4689999999999999988764 25 479999986
No 388
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=51.15 E-value=12 Score=39.04 Aligned_cols=34 Identities=18% Similarity=0.170 Sum_probs=27.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
+.+++|+|||.||+..|..+.+ .| .++.++|+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 39 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQ-----LG-------FKTVCIEKNE 39 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCCC
Confidence 4579999999999999988764 25 3789999874
No 389
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=51.04 E-value=12 Score=38.99 Aligned_cols=33 Identities=27% Similarity=0.260 Sum_probs=26.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~-----~G-------~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ-----LG-------LSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCC
Confidence 4589999999999999987754 25 368999986
No 390
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=51.03 E-value=13 Score=35.86 Aligned_cols=99 Identities=14% Similarity=0.191 Sum_probs=55.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccc---------cCCCCC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE---------HEPVNN 402 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~---------~~~~~~ 402 (592)
.||.|+|+|..|..+|..+... | .+++++|++.- + ++..++.-... .-...+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~~----~---~~~~~~~g~~~~~~~~~~~~~~~~~~ 64 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----G-------NDVTLIDQWPA----H---IEAIRKNGLIADFNGEEVVANLPIFS 64 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH----H---HHHHHHHCEEEEETTEEEEECCCEEC
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEECCHH----H---HHHHHhCCEEEEeCCCeeEecceeec
Confidence 4899999999999999888652 5 36888887421 0 11111000000 000012
Q ss_pred HHHHhccc-CCcEEEeccCCCCCCCHHHHHHHHccCCCCceEEecCCCCC
Q 007703 403 LLDAVKVI-KPTILIGSSGVGRTFTKEVIEAMASFNEVKPLILALSNPTS 451 (592)
Q Consensus 403 L~e~V~~v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIFaLSNPt~ 451 (592)
..|+.+.+ +.|++|= +... -..+++++.++++.....+|..++|...
T Consensus 65 ~~~~~~~~~~~d~vi~-~v~~-~~~~~v~~~l~~~l~~~~~iv~~~~g~~ 112 (316)
T 2ew2_A 65 PEEIDHQNEQVDLIIA-LTKA-QQLDAMFKAIQPMITEKTYVLCLLNGLG 112 (316)
T ss_dssp GGGCCTTSCCCSEEEE-CSCH-HHHHHHHHHHGGGCCTTCEEEECCSSSC
T ss_pred chhhcccCCCCCEEEE-Eecc-ccHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 22333211 4787773 3323 2468888888765321678888998663
No 391
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=51.03 E-value=19 Score=36.21 Aligned_cols=49 Identities=22% Similarity=0.195 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc
Q 007703 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (592)
Q Consensus 314 ~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (592)
.++..+.|++..+. -.+++|+|.|||..|...+.+... .|. ++++.+|+
T Consensus 156 ~~~ta~~al~~~~~-~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 156 PLSVGIHACRRGGV-TLGHKVLVCGAGPIGMVTLLVAKA-----MGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred hHHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 34445566655443 346899999998777665554432 363 57888875
No 392
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=50.81 E-value=11 Score=37.08 Aligned_cols=34 Identities=18% Similarity=0.237 Sum_probs=26.8
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
...+|+|+|||.||+..|..+.+ .|+ ++.++|+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAAR-----AQL-------APLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEecC
Confidence 45689999999999999998865 253 57788854
No 393
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=50.64 E-value=13 Score=36.34 Aligned_cols=79 Identities=15% Similarity=0.233 Sum_probs=39.6
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhh-----------c
Q 007703 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW-----------A 394 (592)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~f-----------A 394 (592)
..+++++++||.||++ ||...++..+.+ .| -+++++|++- +.+......+ .
T Consensus 28 ~~~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~ 89 (281)
T 4dry_A 28 KGSGEGRIALVTGGGT---GVGRGIAQALSA-EG-------YSVVITGRRP-------DVLDAAAGEIGGRTGNIVRAVV 89 (281)
T ss_dssp ------CEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHHHHHHHSSCEEEEE
T ss_pred CCCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEECCH-------HHHHHHHHHHHhcCCCeEEEEE
Confidence 3568889999999853 444445555544 36 3688888741 1122211111 1
Q ss_pred cccCCCCCHHHHhccc-----CCcEEEeccCCC
Q 007703 395 HEHEPVNNLLDAVKVI-----KPTILIGSSGVG 422 (592)
Q Consensus 395 ~~~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 422 (592)
-|-....++.++++.+ ++|+||=..+..
T Consensus 90 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~ 122 (281)
T 4dry_A 90 CDVGDPDQVAALFAAVRAEFARLDLLVNNAGSN 122 (281)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 1111223455566555 799999777654
No 394
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=50.58 E-value=15 Score=39.52 Aligned_cols=36 Identities=19% Similarity=0.241 Sum_probs=28.8
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
-.+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRE-----LGR-------SVHVIETAG 49 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 345689999999999999988875 264 688898864
No 395
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=50.55 E-value=15 Score=39.03 Aligned_cols=38 Identities=21% Similarity=0.338 Sum_probs=29.3
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCc
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (592)
...+|||+|||.||+..|..|.+. +. ..+|.++|+..-
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~-----~~-----g~~V~lie~~~~ 47 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRAR-----DP-----GARVLIVSEDPE 47 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHH-----ST-----TCEEEEEESSSS
T ss_pred CcCCEEEECChHHHHHHHHHHHhc-----CC-----CCeEEEEeCCCC
Confidence 356899999999999999988653 21 257999998743
No 396
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=50.53 E-value=26 Score=35.16 Aligned_cols=56 Identities=13% Similarity=0.170 Sum_probs=35.3
Q ss_pred chHHHHHHHHHHHHHHhCCCccc--ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 309 GTASVVLAGVVAALKLIGGTLAE--HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 309 GTaaV~LAgll~Alr~~g~~l~d--~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
++-...++..+.|+...+..-.+ ++++|.|| |..|..++.++.. .|. ++++.+|+.
T Consensus 137 a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~~ 195 (357)
T 2zb4_A 137 GAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICGT 195 (357)
T ss_dssp TTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeCC
Confidence 33344455556667433443456 89999998 8777777665543 363 478888763
No 397
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=50.41 E-value=27 Score=32.05 Aligned_cols=94 Identities=16% Similarity=0.204 Sum_probs=51.5
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc-ccCC-CCCHHHHhcc
Q 007703 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEP-VNNLLDAVKV 409 (592)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~-~~~L~e~V~~ 409 (592)
||+|.|| |-.|..+++.|++ .| .++++++++.- +...+ .+..+.. |-.+ ..++.++++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~~----~~~~~--~~~~~~~~D~~d~~~~~~~~~~- 62 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLST-----TD-------YQIYAGARKVE----QVPQY--NNVKAVHFDVDWTPEEMAKQLH- 62 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTT-----SS-------CEEEEEESSGG----GSCCC--TTEEEEECCTTSCHHHHHTTTT-
T ss_pred eEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCcc----chhhc--CCceEEEecccCCHHHHHHHHc-
Confidence 7899995 6666666665543 25 46888887521 11111 1111111 2222 235666776
Q ss_pred cCCcEEEeccCCCCC--------CCHHHHHHHHccCCCCceEEecC
Q 007703 410 IKPTILIGSSGVGRT--------FTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 410 vkPtvLIG~S~~~g~--------Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
++|++|=+.+.... -+..++++|.+..- +.|||.=|
T Consensus 63 -~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~-~~iv~~SS 106 (219)
T 3dqp_A 63 -GMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEV-KRFILLST 106 (219)
T ss_dssp -TCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTC-CEEEEECC
T ss_pred -CCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCC-CEEEEECc
Confidence 49999987775431 14567777766544 55666433
No 398
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=50.40 E-value=16 Score=35.35 Aligned_cols=82 Identities=18% Similarity=0.223 Sum_probs=40.5
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc-ccCCCCCHH
Q 007703 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLL 404 (592)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~ 404 (592)
+.++.++++||.||++ ||...++..+.+ .| -+++++|++- ++.+.+...+..+.. |-....++.
T Consensus 11 ~~~~~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~Dv~d~~~v~ 75 (266)
T 3p19_A 11 GRGSMKKLVVITGASS---GIGEAIARRFSE-EG-------HPLLLLARRV----ERLKALNLPNTLCAQVDVTDKYTFD 75 (266)
T ss_dssp ----CCCEEEEESTTS---HHHHHHHHHHHH-TT-------CCEEEEESCH----HHHHTTCCTTEEEEECCTTCHHHHH
T ss_pred CCCCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEECCH----HHHHHhhcCCceEEEecCCCHHHHH
Confidence 3457788999999853 444555555554 36 3688887741 110111111111111 212223455
Q ss_pred HHhccc-----CCcEEEeccCCC
Q 007703 405 DAVKVI-----KPTILIGSSGVG 422 (592)
Q Consensus 405 e~V~~v-----kPtvLIG~S~~~ 422 (592)
++++.+ ++|+||=..+..
T Consensus 76 ~~~~~~~~~~g~iD~lvnnAg~~ 98 (266)
T 3p19_A 76 TAITRAEKIYGPADAIVNNAGMM 98 (266)
T ss_dssp HHHHHHHHHHCSEEEEEECCCCC
T ss_pred HHHHHHHHHCCCCCEEEECCCcC
Confidence 555544 789999776643
No 399
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=50.28 E-value=12 Score=38.50 Aligned_cols=153 Identities=16% Similarity=0.163 Sum_probs=75.0
Q ss_pred CCcccccccCcchHHHHHhcCCCCCeeEEEEecCceecccCCCCCCccccchhhHHHHHHhcCCCCCceeeEEeecCCCc
Q 007703 157 PQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNN 236 (592)
Q Consensus 157 p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnN 236 (592)
|||..++--|-|++. -.+..++.+|||.+.=| |.--+. -=||. .+|+.+-+| +
T Consensus 16 ~~~~~~~~~~~~~~~------~~~~Mki~IvTDSt~dL------------~~e~~~----~~~I~---vvPL~v~~~--~ 68 (315)
T 3fys_A 16 PRGSHMASMTGGQQM------GRGSMNIAVVTDSTAYI------------PKEMRE----QHQIH---MIPLQVVFR--E 68 (315)
T ss_dssp ------------------------CCCEEEEEEGGGCC------------CHHHHH----HHTEE---EECCEEECS--S
T ss_pred cCccccccccchhhh------CcCCCcEEEEEECCCCC------------CHHHHH----hCCeE---EEeEEEEEC--C
Confidence 677776666655443 22335799999987532 221111 12566 888888875 3
Q ss_pred hhcccCcccccccccCCChhhhHHHHHHHHHHHHH--hcCCCeeeeeecCCCchHHHHHHHHc---CC---CceeccCCc
Q 007703 237 EQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQ--NYGEKVLIQFEDFANHNAFELLAKYG---TT---HLVFNDDIQ 308 (592)
Q Consensus 237 e~LL~Dp~YlG~r~~R~~geeY~~~idefv~av~~--~fGp~~lIqfEDf~~~~Af~lL~ryr---~~---~~~FNDDiQ 308 (592)
++..++.- ++ .+||.+.++. .. |+ =+.|+--++++-|+ ++ +.+++
T Consensus 69 ~~Y~D~~d--------i~-------~~efy~~m~~~~~~-p~-------TSqPs~~~~~~~fe~l~~~~~~Ii~I~---- 121 (315)
T 3fys_A 69 ETYREEIE--------LD-------WKSFYEEVKKHNEL-PT-------TSQPPIGELVALYEELGKSYDAVISIH---- 121 (315)
T ss_dssp CEEEBTTT--------BC-------HHHHHHHHHTTTCC-CE-------EECCCHHHHHHHHHHHTTTCSEEEEEE----
T ss_pred EEEECCCC--------CC-------HHHHHHHHHhCCCC-cc-------cCCCCHHHHHHHHHHHHhcCCcEEEEe----
Confidence 33332210 11 3667777664 22 21 23344444444333 22 22222
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHH-HHhcCC-Chhhh
Q 007703 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEI-SKQTKA-PVEET 365 (592)
Q Consensus 309 GTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~-~~~~G~-s~eeA 365 (592)
=+-.|.|-.++.+.....+.+.+|-++=..+++.|..-++..+. ..++|. |.+|.
T Consensus 122 --iSS~LSGTy~sA~~Aa~~~~~~~I~ViDS~~~s~g~g~lv~~Aa~l~~~G~~s~eeI 178 (315)
T 3fys_A 122 --LSSGISGTFSSAAAADSMVDNIDVYPFDSEISCLAQGFYALKAAELIKNGASSPEDI 178 (315)
T ss_dssp --SCTTTCSHHHHHHHGGGGCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred --CCCcHhHHHHHHHHHHHhCCCCCEEEECCchhHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 12234445566666656677789999999888888877777653 224699 98874
No 400
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=50.06 E-value=12 Score=38.99 Aligned_cols=32 Identities=28% Similarity=0.317 Sum_probs=26.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQ-----LG-------QKVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 479999999999999987764 25 478999986
No 401
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=50.02 E-value=11 Score=39.68 Aligned_cols=63 Identities=13% Similarity=0.154 Sum_probs=28.6
Q ss_pred CCcchHHHHHHHHHHHHHH---hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcc
Q 007703 306 DIQGTASVVLAGVVAALKL---IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (592)
Q Consensus 306 DiQGTaaV~LAgll~Alr~---~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv 378 (592)
..||-|+++.--.++--.. ...+....+|||+|||.||+..|..+.+.. .| .++.++|+....
T Consensus 8 ~~~~~~~~~~np~~g~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~~ 73 (480)
T 3cgb_A 8 HHHGMASMTGGQQMGRTLYDDDDKDRWGSMNYVIIGGDAAGMSAAMQIVRND---EN-------ANVVTLEKGEIY 73 (480)
T ss_dssp -----------------------------CEEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEECSSSCC
T ss_pred cccccccccchhhhcccccCCCCcCccccceEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCCC
Confidence 3466666655444432211 111122358999999999999999886531 13 478999987543
No 402
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=49.98 E-value=26 Score=34.50 Aligned_cols=102 Identities=16% Similarity=0.118 Sum_probs=58.5
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCch-----hchhhcc-ccCCCC
Q 007703 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-----FKKPWAH-EHEPVN 401 (592)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~-----~k~~fA~-~~~~~~ 401 (592)
+++.+|+|.|| |-.|..+++.|++ .| .+++.+|+.. .+...+.. .+..+.. +-....
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 70 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQT-----MG-------ATVKGYSLTA----PTVPSLFETARVADGMQSEIGDIRDQN 70 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----SSSSCHHHHTTTTTTSEEEECCTTCHH
T ss_pred hCCCEEEEECCCchHHHHHHHHHHh-----CC-------CeEEEEeCCC----cccchhhHhhccCCceEEEEccccCHH
Confidence 45678999996 7777777777654 25 3688888742 11111110 0111111 111223
Q ss_pred CHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHccC-CCCceEEecC
Q 007703 402 NLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFN-EVKPLILALS 447 (592)
Q Consensus 402 ~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~-e~rPIIFaLS 447 (592)
++.++++.+++|++|=+.+.... -|..+++++.+.. - +.|||.=|
T Consensus 71 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~v~~SS 132 (357)
T 1rkx_A 71 KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGV-KAVVNITS 132 (357)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCC-CEEEEECC
T ss_pred HHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEEecC
Confidence 57778887789999988875321 0234566665544 4 67888655
No 403
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=49.83 E-value=31 Score=34.50 Aligned_cols=86 Identities=19% Similarity=0.079 Sum_probs=54.1
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcc
Q 007703 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (592)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~ 409 (592)
..||+++|+ |..|--+++.+.+ .|. +-++.||.+.- +. + . + ..+-..++.|+.+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~-----~g~------~~V~~V~p~~~---g~-~-~------~--G~~vy~sl~el~~~ 62 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIA-----YGT------KMVGGVTPGKG---GT-T-H------L--GLPVFNTVREAVAA 62 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-----HTC------EEEEEECTTCT---TC-E-E------T--TEEEESSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHH-----CCC------eEEEEeCCCcc---cc-e-e------C--CeeccCCHHHHhhc
Confidence 469999999 9888776665543 253 35677877411 00 1 0 0 01113678898875
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHccCCCCceE
Q 007703 410 IKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLI 443 (592)
Q Consensus 410 vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPII 443 (592)
.+||+.|= .+.+ .+..+++++..+..- +.+|
T Consensus 63 ~~~D~viI-~tP~-~~~~~~~~ea~~~Gi-~~iV 93 (288)
T 2nu8_A 63 TGATASVI-YVPA-PFCKDSILEAIDAGI-KLII 93 (288)
T ss_dssp HCCCEEEE-CCCG-GGHHHHHHHHHHTTC-SEEE
T ss_pred CCCCEEEE-ecCH-HHHHHHHHHHHHCCC-CEEE
Confidence 57998883 3333 688999998887665 5533
No 404
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=49.79 E-value=16 Score=38.80 Aligned_cols=36 Identities=14% Similarity=0.225 Sum_probs=28.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCc
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (592)
.+|||+|||.||+..|..|.+. |- ..+|.++|+..-
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~-----~~-----~~~V~lie~~~~ 37 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL-----SE-----TAEIIMFERGEY 37 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CS-----SSEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhh-----Cc-----CCCEEEEECCCC
Confidence 4899999999999999988653 21 247889988754
No 405
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=49.69 E-value=48 Score=31.90 Aligned_cols=37 Identities=24% Similarity=0.427 Sum_probs=26.1
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+|+++++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 3 ~l~~k~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~ 39 (274)
T 3e03_A 3 TLSGKTLFITGASR---GIGLAIALRAAR-DG-------ANVAIAAKS 39 (274)
T ss_dssp CCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCcEEEEECCCC---hHHHHHHHHHHH-CC-------CEEEEEecc
Confidence 57889999999863 455555555555 36 368888875
No 406
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=49.52 E-value=13 Score=39.55 Aligned_cols=33 Identities=24% Similarity=0.420 Sum_probs=27.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
.+|||+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAAR-----HN-------AKVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHH-----CC-------CcEEEEeCCC
Confidence 579999999999999988865 25 4799999863
No 407
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=49.46 E-value=14 Score=39.41 Aligned_cols=34 Identities=21% Similarity=0.390 Sum_probs=26.6
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.+.+|+|+|||.+|+..|-.|.+ .|+ ++.++|++
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 44 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRL-----GGV-------DVMVLEQL 44 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 56789999999999999988865 365 46666654
No 408
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=49.46 E-value=13 Score=40.04 Aligned_cols=38 Identities=21% Similarity=0.374 Sum_probs=29.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (592)
..+|||+|||.||.-.|-.|.+... .| -+|.++|+.-.
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQ--GT-------ADITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTT--TS-------SEEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcC--CC-------CcEEEEeCCCC
Confidence 4689999999999999998876320 24 47889998643
No 409
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=49.36 E-value=10 Score=39.84 Aligned_cols=37 Identities=22% Similarity=0.384 Sum_probs=26.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCc
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (592)
.+|||+|||.||...|-.|..... .| -++.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G-------~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DR-------IDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GG-------SEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CC-------CEEEEEecCCC
Confidence 479999999999999998876431 24 36888887643
No 410
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=49.29 E-value=18 Score=33.31 Aligned_cols=101 Identities=14% Similarity=0.069 Sum_probs=54.7
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc-ccCCCCCHHHH
Q 007703 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 406 (592)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~ 406 (592)
....+|+|.|| |-.|..+++.+++ .|- ..++++++++. ++.+.+.. ...+.. +-....++.++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~-----~~~-----g~~V~~~~r~~----~~~~~~~~-~~~~~~~D~~d~~~~~~~ 66 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKE-----GSD-----KFVAKGLVRSA----QGKEKIGG-EADVFIGDITDADSINPA 66 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHH-----TTT-----TCEEEEEESCH----HHHHHTTC-CTTEEECCTTSHHHHHHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHh-----cCC-----CcEEEEEEcCC----CchhhcCC-CeeEEEecCCCHHHHHHH
Confidence 34578999996 6667667666654 220 14678777641 10000100 001111 11122357777
Q ss_pred hcccCCcEEEeccCCCCC----------------C-------------CHHHHHHHHccCCCCceEEecC
Q 007703 407 VKVIKPTILIGSSGVGRT----------------F-------------TKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 407 V~~vkPtvLIG~S~~~g~----------------F-------------t~evv~~Ma~~~e~rPIIFaLS 447 (592)
++. +|++|=+.+.... | +..++++|.+..- +.|||.=|
T Consensus 67 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~iv~~SS 133 (253)
T 1xq6_A 67 FQG--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGV-KHIVVVGS 133 (253)
T ss_dssp HTT--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTC-SEEEEEEE
T ss_pred HcC--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCC-CEEEEEcC
Confidence 774 8999977664321 1 4667788876655 66777543
No 411
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=49.28 E-value=37 Score=33.66 Aligned_cols=47 Identities=21% Similarity=0.191 Sum_probs=30.4
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc
Q 007703 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (592)
Q Consensus 316 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (592)
...+.+++..+.+ .+++++|+|||+.|.-.+.++..+ .| .+++.+|+
T Consensus 150 ~ta~~~l~~~~~~-~g~~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~ 196 (348)
T 4eez_A 150 VTTYKAIKVSGVK-PGDWQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDI 196 (348)
T ss_dssp HHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEES
T ss_pred eeEEeeecccCCC-CCCEEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEEC
Confidence 3445677766553 578999999998885444433322 23 57888876
No 412
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=49.27 E-value=14 Score=39.52 Aligned_cols=37 Identities=22% Similarity=0.383 Sum_probs=28.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
..+|||+|||.||+..|-.|..... .| -++.++|+.-
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQ--QQ-------ANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCC--SS-------CEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcC--CC-------CEEEEECCCC
Confidence 4689999999999999988865310 25 3688999854
No 413
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=49.22 E-value=7.9 Score=38.91 Aligned_cols=86 Identities=13% Similarity=0.121 Sum_probs=46.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 411 (592)
.||.|+|+|..|...++.+.. +..|. +-+.++|++ . +......+.|-.......++.|+++.-+
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~---~~~~~------~l~av~d~~----~---~~~~~~~~~~g~~~~~~~~~~~ll~~~~ 66 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITN---KLSGA------EIVAVTDVN----Q---EAAQKVVEQYQLNATVYPNDDSLLADEN 66 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHH---TCSSE------EEEEEECSS----H---HHHHHHHHHTTCCCEEESSHHHHHHCTT
T ss_pred EEEEEECccHHHHHHHHHHHh---hCCCc------EEEEEEcCC----H---HHHHHHHHHhCCCCeeeCCHHHHhcCCC
Confidence 489999999988766655432 11121 223356652 1 1122222222100122368999999878
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHc
Q 007703 412 PTILIGSSGVGRTFTKEVIEAMAS 435 (592)
Q Consensus 412 PtvLIG~S~~~g~Ft~evv~~Ma~ 435 (592)
+|+++ +++.. ....+++....+
T Consensus 67 ~D~V~-i~tp~-~~h~~~~~~al~ 88 (344)
T 3mz0_A 67 VDAVL-VTSWG-PAHESSVLKAIK 88 (344)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHH
T ss_pred CCEEE-ECCCc-hhHHHHHHHHHH
Confidence 89888 44433 455566555443
No 414
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=49.18 E-value=12 Score=35.80 Aligned_cols=32 Identities=19% Similarity=0.306 Sum_probs=24.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
..|+|+|||.||+-.|..+.+ .|+ ++.++|+.
T Consensus 5 yDvvIIG~GpAGl~AA~~la~-----~g~-------~v~liE~~ 36 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGR-----SSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CcEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 369999999999988866644 363 57788864
No 415
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=49.08 E-value=14 Score=39.24 Aligned_cols=34 Identities=21% Similarity=0.405 Sum_probs=27.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
.-.|+|+|||.+|+++|-.+.+ .|+ ++.++|+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~-----~G~-------~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAG-----RGL-------SVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEECCC
Confidence 4579999999999999998865 364 588999864
No 416
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=49.08 E-value=15 Score=38.44 Aligned_cols=34 Identities=32% Similarity=0.401 Sum_probs=27.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
+..++|+|||.||+..|..+.+ .| .++.++|+++
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~-----~G-------~~V~liEk~~ 37 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAK-----AK-------YNVLMADPKG 37 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECTTS
T ss_pred cceEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECCC
Confidence 3579999999999999988764 36 4789999655
No 417
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=48.96 E-value=11 Score=40.79 Aligned_cols=36 Identities=14% Similarity=0.085 Sum_probs=28.4
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
.+.+|||+|||.||+..|..|.. +.|+ ++.++|+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 35689999999999999988862 2363 688999864
No 418
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=48.96 E-value=15 Score=38.53 Aligned_cols=33 Identities=18% Similarity=0.457 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+..++|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~-----~G-------~~V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGA-----LG-------KRVAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----Cc-------CEEEEEeCC
Confidence 4689999999999999988765 36 468899984
No 419
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=48.96 E-value=13 Score=38.79 Aligned_cols=33 Identities=21% Similarity=0.261 Sum_probs=26.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+.++||+|||.||+..|..+.+. | .++.++|+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL-----G-------IPTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEccC
Confidence 45799999999999999877653 5 479999983
No 420
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=48.84 E-value=24 Score=36.29 Aligned_cols=103 Identities=12% Similarity=0.093 Sum_probs=46.9
Q ss_pred HHHHHHhCCCccc-ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcccc
Q 007703 319 VAALKLIGGTLAE-HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH 397 (592)
Q Consensus 319 l~Alr~~g~~l~d-~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~ 397 (592)
|+.-.+....+++ .||-|+|+|..|-.-++.+...-.....+ .+-.+=+-++|++ . + .-+.+|...
T Consensus 13 ~~~~~~~~~~Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~--~~~~elvav~d~~----~---~----~a~~~a~~~ 79 (412)
T 4gqa_A 13 LGTENLYFQSMSARLNIGLIGSGFMGQAHADAYRRAAMFYPDL--PKRPHLYALADQD----Q---A----MAERHAAKL 79 (412)
T ss_dssp ------------CEEEEEEECCSHHHHHHHHHHHHHHHHCTTS--SSEEEEEEEECSS----H---H----HHHHHHHHH
T ss_pred cccccCccccccccceEEEEcCcHHHHHHHHHHHhcccccccc--CCCeEEEEEEcCC----H---H----HHHHHHHHc
Confidence 3444455555665 59999999988765555554321110001 0001123355542 1 1 112333321
Q ss_pred --C-CCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHc
Q 007703 398 --E-PVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMAS 435 (592)
Q Consensus 398 --~-~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~ 435 (592)
+ -..++.|.++.-++|+++ ++++...=-+-++++|.+
T Consensus 80 ~~~~~y~d~~~ll~~~~vD~V~-I~tp~~~H~~~~~~al~a 119 (412)
T 4gqa_A 80 GAEKAYGDWRELVNDPQVDVVD-ITSPNHLHYTMAMAAIAA 119 (412)
T ss_dssp TCSEEESSHHHHHHCTTCCEEE-ECSCGGGHHHHHHHHHHT
T ss_pred CCCeEECCHHHHhcCCCCCEEE-ECCCcHHHHHHHHHHHHc
Confidence 1 236899999988899877 666443323444444543
No 421
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=48.70 E-value=10 Score=38.30 Aligned_cols=36 Identities=28% Similarity=0.415 Sum_probs=29.8
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+|++.++||+|+|..|..-+++|+.+ | .++.++|.+
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~-----G-------a~VtViap~ 45 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPT-----G-------CKLTLVSPD 45 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGG-----T-------CEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhC-----C-------CEEEEEcCC
Confidence 57889999999999999999988753 5 468888864
No 422
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=48.68 E-value=16 Score=37.94 Aligned_cols=37 Identities=22% Similarity=0.278 Sum_probs=28.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (592)
..+|||+|||.||+..|..+.+ .|. ..++.++|+..-
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~-----~g~-----~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRA-----SGW-----EGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHc-----cCc-----CCCEEEEECCCC
Confidence 3689999999999999998765 364 137999987643
No 423
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=48.61 E-value=10 Score=40.46 Aligned_cols=42 Identities=14% Similarity=0.226 Sum_probs=0.0
Q ss_pred EEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEE--EEccC
Q 007703 334 FLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC--LVDSK 375 (592)
Q Consensus 334 iv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~--lvD~~ 375 (592)
||++|||.+|+++|-.|.+......-+...+.....| ++|++
T Consensus 42 vi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~ 85 (501)
T 4b63_A 42 LLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQ 85 (501)
T ss_dssp EEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESS
T ss_pred EEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEecc
No 424
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=48.60 E-value=26 Score=33.31 Aligned_cols=79 Identities=9% Similarity=0.101 Sum_probs=42.7
Q ss_pred CcccceEEEeCcCh---HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhh--------ccc
Q 007703 328 TLAEHRFLFLGAGE---AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW--------AHE 396 (592)
Q Consensus 328 ~l~d~riv~~GAGs---Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~f--------A~~ 396 (592)
++++.++||.||+. .|..+|+.+++ .| -+++++|+.. ...+.+......+ .-|
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~D 67 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHE-----AG-------ARLIFTYAGE----RLEKSVHELAGTLDRNDSIILPCD 67 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESSG----GGHHHHHHHHHTSSSCCCEEEECC
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHH-----CC-------CEEEEecCch----HHHHHHHHHHHhcCCCCceEEeCC
Confidence 57889999999853 45556665543 36 3588887752 1001111111111 112
Q ss_pred cCCCCCHHHHhccc-----CCcEEEeccCCC
Q 007703 397 HEPVNNLLDAVKVI-----KPTILIGSSGVG 422 (592)
Q Consensus 397 ~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 422 (592)
-....++.++++.+ ++|+||=..+..
T Consensus 68 ~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~ 98 (266)
T 3oig_A 68 VTNDAEIETCFASIKEQVGVIHGIAHCIAFA 98 (266)
T ss_dssp CSSSHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHhCCeeEEEEccccc
Confidence 22223455666655 789999777654
No 425
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=48.46 E-value=15 Score=38.35 Aligned_cols=30 Identities=23% Similarity=0.503 Sum_probs=24.1
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
||.|+|+|..|..+|..+.+ | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~------G-------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL------Q-------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT------T-------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC------C-------CEEEEEECC
Confidence 79999999999999887742 4 468888874
No 426
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=48.40 E-value=13 Score=35.27 Aligned_cols=37 Identities=27% Similarity=0.257 Sum_probs=23.0
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+|+++++||.||+. ||...++..+.+ .| .+++++|++
T Consensus 1 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G-------~~V~~~~r~ 37 (255)
T 2q2v_A 1 TLKGKTALVTGSTS---GIGLGIAQVLAR-AG-------ANIVLNGFG 37 (255)
T ss_dssp CCTTCEEEESSCSS---HHHHHHHHHHHH-TT-------CEEEEECSS
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 36678999999842 344444444444 36 357887764
No 427
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=48.38 E-value=13 Score=38.58 Aligned_cols=32 Identities=19% Similarity=0.386 Sum_probs=26.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.+|+|+|||.||+-.|-.|.+ .|+ ++.++|++
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~-----~G~-------~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQ-----HDV-------DVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------eEEEEcCC
Confidence 579999999999999988765 364 67888865
No 428
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=48.35 E-value=7.6 Score=37.51 Aligned_cols=99 Identities=10% Similarity=0.068 Sum_probs=56.9
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCc--cCCchhchhhcc-ccCCCCCHHHH
Q 007703 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK--DSLQHFKKPWAH-EHEPVNNLLDA 406 (592)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~--~~l~~~k~~fA~-~~~~~~~L~e~ 406 (592)
..+|+|.|| |..|..+++.|++. | ..++..++++. ++. ..+......+.+ |-.+..+|.++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-----g------~~~V~~~~R~~----~~~~~~~l~~~~~~~~~~D~~d~~~l~~~ 69 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED-----G------TFKVRVVTRNP----RKKAAKELRLQGAEVVQGDQDDQVIMELA 69 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-----C------SSEEEEEESCT----TSHHHHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhc-----C------CceEEEEEcCC----CCHHHHHHHHCCCEEEEecCCCHHHHHHH
Confidence 468999998 88888888877652 4 13677777641 110 001010111111 11222467788
Q ss_pred hcccCCcEEEeccCCCCC--------CCHHHHHHHHccCCCCceEEecCC
Q 007703 407 VKVIKPTILIGSSGVGRT--------FTKEVIEAMASFNEVKPLILALSN 448 (592)
Q Consensus 407 V~~vkPtvLIG~S~~~g~--------Ft~evv~~Ma~~~e~rPIIFaLSN 448 (592)
++. +|++|-+++.... .++.++++|.+..- +-||| .|-
T Consensus 70 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv-~~iv~-~S~ 115 (299)
T 2wm3_A 70 LNG--AYATFIVTNYWESCSQEQEVKQGKLLADLARRLGL-HYVVY-SGL 115 (299)
T ss_dssp HTT--CSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTC-SEEEE-CCC
T ss_pred Hhc--CCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCC-CEEEE-EcC
Confidence 875 8999987653211 25567788876555 67888 664
No 429
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=48.29 E-value=9.6 Score=38.21 Aligned_cols=80 Identities=16% Similarity=0.126 Sum_probs=45.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccc--cCCCCCHHHHhcc
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE--HEPVNNLLDAVKV 409 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~--~~~~~~L~e~V~~ 409 (592)
.||.|+|+|..|...++.+.. ..+. +-+.++|++ . + ..+.++.. .....++.|+++.
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~----~~~~------~l~av~d~~----~---~----~~~~~a~~~g~~~~~~~~~~l~~ 63 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAA----NPDL------ELVVIADPF----I---E----GAQRLAEANGAEAVASPDEVFAR 63 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHH----CTTE------EEEEEECSS----H---H----HHHHHHHTTTCEEESSHHHHTTC
T ss_pred eEEEEECCcHHHHHHHHHHHh----CCCc------EEEEEECCC----H---H----HHHHHHHHcCCceeCCHHHHhcC
Confidence 589999999988776665533 1121 223356653 1 1 11223322 1223689999997
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHH
Q 007703 410 IKPTILIGSSGVGRTFTKEVIEAMA 434 (592)
Q Consensus 410 vkPtvLIG~S~~~g~Ft~evv~~Ma 434 (592)
-++|+++ +++.. ....+++....
T Consensus 64 ~~~D~V~-i~tp~-~~h~~~~~~al 86 (344)
T 3euw_A 64 DDIDGIV-IGSPT-STHVDLITRAV 86 (344)
T ss_dssp SCCCEEE-ECSCG-GGHHHHHHHHH
T ss_pred CCCCEEE-EeCCc-hhhHHHHHHHH
Confidence 7889887 44434 34555555443
No 430
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=48.28 E-value=13 Score=37.59 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=26.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+.++||+|||.||+..|..+.+ .|. .-++.++|++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-----~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRK-----LDG-----ETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHT-----TCS-----SSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHh-----hCC-----CCCEEEEECC
Confidence 3679999999999999987754 353 2357888764
No 431
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=48.20 E-value=15 Score=39.12 Aligned_cols=37 Identities=30% Similarity=0.434 Sum_probs=28.9
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcc
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv 378 (592)
...+|+|+|||.||+..|..+.. .|+ ++.++|+..-+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liEk~~~~ 127 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELAL-----LGA-------RVVLVEKRIKF 127 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHH-----CCC-------eEEEEEecccc
Confidence 35689999999999999988765 363 68889876443
No 432
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=48.16 E-value=12 Score=37.25 Aligned_cols=81 Identities=19% Similarity=0.241 Sum_probs=45.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 411 (592)
.||.|+|+|..|...++.+.. ..+. +-+.++|++ . +......+.|- .+ ..++.|+++.-+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~----~~~~------~l~av~d~~----~---~~~~~~~~~~~--~~-~~~~~~~l~~~~ 63 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSG----NADA------RLVAVADAF----P---AAAEAIAGAYG--CE-VRTIDAIEAAAD 63 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHH----CTTE------EEEEEECSS----H---HHHHHHHHHTT--CE-ECCHHHHHHCTT
T ss_pred eEEEEECCCHHHHHHHHHHhh----CCCc------EEEEEECCC----H---HHHHHHHHHhC--CC-cCCHHHHhcCCC
Confidence 589999999988776665533 1121 223356653 1 11222222221 12 578999999777
Q ss_pred CcEEEeccCCCCCCCHHHHHHHH
Q 007703 412 PTILIGSSGVGRTFTKEVIEAMA 434 (592)
Q Consensus 412 PtvLIG~S~~~g~Ft~evv~~Ma 434 (592)
+|+++ +++.. ....++++...
T Consensus 64 ~D~V~-i~tp~-~~h~~~~~~al 84 (331)
T 4hkt_A 64 IDAVV-ICTPT-DTHADLIERFA 84 (331)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHH
T ss_pred CCEEE-EeCCc-hhHHHHHHHHH
Confidence 89887 44444 44555555443
No 433
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=47.89 E-value=11 Score=37.24 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=25.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.+|+|+|||.+|+..|..|.+.. ..| .++.++|+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~--~~G-------~~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT--SGP-------LYLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC---CC-------EEEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc--cCC-------ceEEEEECC
Confidence 37999999999999998886410 024 368888876
No 434
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=47.65 E-value=38 Score=34.23 Aligned_cols=50 Identities=20% Similarity=0.084 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc
Q 007703 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (592)
Q Consensus 314 ~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (592)
.++..+.++......-.+++|+|.|||..|...+.+... .|. ++++.+|+
T Consensus 174 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~-----~Ga------~~Vi~~~~ 223 (371)
T 1f8f_A 174 GIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKV-----CGA------SIIIAVDI 223 (371)
T ss_dssp HHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHH-----HTC------SEEEEEES
T ss_pred hHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 344444555333333457899999999777666554432 263 46888875
No 435
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=47.57 E-value=34 Score=36.63 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
..||.|+|+|.-|+.+|..++.. | .+++++|.+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-----G-------~~V~~~D~~ 40 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-----G-------HEVVCVDKD 40 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-----C-------CEEEEEeCC
Confidence 46999999999999999988763 5 467888874
No 436
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=47.55 E-value=19 Score=35.20 Aligned_cols=101 Identities=18% Similarity=0.143 Sum_probs=56.6
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCc-cCCchhch----------hhcc-ccC
Q 007703 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK-DSLQHFKK----------PWAH-EHE 398 (592)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~-~~l~~~k~----------~fA~-~~~ 398 (592)
.+|+|.|| |-.|..+++.|++ .| .+++++|+.-- ..|. ....+... .+.. +-.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~--~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~ 68 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLE-----AG-------YLPVVIDNFHN--AFRGGGSLPESLRRVQELTGRSVEFEEMDIL 68 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSS--SCBCSSSSBHHHHHHHHHHTCCCEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEecCCc--ccccccccHHHHHHHHhccCCceEEEECCCC
Confidence 58999986 7777777777654 25 36888876411 0010 00111110 1111 111
Q ss_pred CCCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHccCCCCceEEecC
Q 007703 399 PVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 399 ~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
...++.++++..++|++|=+.+.... -+..++++|.+..- +.|||.=|
T Consensus 69 ~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~iv~~SS 132 (348)
T 1ek6_A 69 DQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV-KNLVFSSS 132 (348)
T ss_dssp CHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC-CEEEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCC-CEEEEECc
Confidence 22356777776679999988775421 13457777776555 67888543
No 437
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=47.51 E-value=16 Score=38.04 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=27.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
+.+|+|+|||.||+..|..+.+ .| .++.++|+..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~-----~G-------~~V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQ-----LG-------FNTACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCC
Confidence 4579999999999999988865 25 3799999853
No 438
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=47.46 E-value=17 Score=37.93 Aligned_cols=33 Identities=24% Similarity=0.247 Sum_probs=27.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+-.++|+|||.||+..|..+.+. | .++.++|+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~ 35 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQL-----G-------LKTALIEKY 35 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----C-------CEEEEEeCC
Confidence 35699999999999999888653 5 478899986
No 439
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=47.46 E-value=17 Score=37.05 Aligned_cols=35 Identities=23% Similarity=0.397 Sum_probs=27.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
..|+|+|||.+|+.+|-.|.+.. -| .++.++|+..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~---pG-------~~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLA---PG-------RSLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC---TT-------SCEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcC---CC-------CeEEEEeCCC
Confidence 58999999999999998886520 15 3688999863
No 440
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=47.41 E-value=30 Score=34.34 Aligned_cols=50 Identities=12% Similarity=-0.073 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 314 VLAGVVAALKLIGGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 314 ~LAgll~Alr~~g~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.++..+.+++..+..-.+++++|.|| |..|..++.++.. .| -+++.+|+.
T Consensus 129 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G-------~~Vi~~~~~ 179 (333)
T 1wly_A 129 KGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARH-----LG-------ATVIGTVST 179 (333)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred hHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 44445556654444456789999996 8888877776653 35 258888764
No 441
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=47.40 E-value=36 Score=34.31 Aligned_cols=45 Identities=18% Similarity=0.082 Sum_probs=28.3
Q ss_pred HHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc
Q 007703 319 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (592)
Q Consensus 319 l~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (592)
+.++......-.+++++|.|||..|...+.+... .|. ++++.+|+
T Consensus 179 ~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~-----~Ga------~~Vi~~~~ 223 (373)
T 2fzw_A 179 YGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKV-----AGA------SRIIGVDI 223 (373)
T ss_dssp HHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred HHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 3344333344457899999999777666554432 263 47888875
No 442
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=47.40 E-value=27 Score=33.19 Aligned_cols=79 Identities=15% Similarity=0.250 Sum_probs=41.0
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCc-hhchhhc-cccCCCCCHHH
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWA-HEHEPVNNLLD 405 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~-~~k~~fA-~~~~~~~~L~e 405 (592)
++++.+++|.||++ ||...++..+.+ .| .+++++|++- ++ +.+. .....+. -|-....++.+
T Consensus 3 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~~-~~~~~~~~~~~~~~D~~~~~~~~~ 66 (256)
T 2d1y_A 3 LFAGKGVLVTGGAR---GIGRAIAQAFAR-EG-------ALVALCDLRP----EG-KEVAEAIGGAFFQVDLEDERERVR 66 (256)
T ss_dssp TTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESST----TH-HHHHHHHTCEEEECCTTCHHHHHH
T ss_pred CCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----hH-HHHHHHhhCCEEEeeCCCHHHHHH
Confidence 46778999999753 444445555544 36 3688887741 11 1010 0000111 12122234555
Q ss_pred Hhccc-----CCcEEEeccCCC
Q 007703 406 AVKVI-----KPTILIGSSGVG 422 (592)
Q Consensus 406 ~V~~v-----kPtvLIG~S~~~ 422 (592)
+++.+ ++|+||=..+..
T Consensus 67 ~~~~~~~~~g~iD~lv~~Ag~~ 88 (256)
T 2d1y_A 67 FVEEAAYALGRVDVLVNNAAIA 88 (256)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 55554 799999776644
No 443
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=47.40 E-value=59 Score=30.67 Aligned_cols=77 Identities=14% Similarity=0.182 Sum_probs=41.2
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHh
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V 407 (592)
++++++++|.||++ ||...++..+.+ .| .+++++|++--+ .... -..+.-|-....++.+++
T Consensus 4 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G-------~~V~~~~r~~~~-----~~~~--~~~~~~D~~d~~~~~~~~ 65 (250)
T 2fwm_X 4 DFSGKNVWVTGAGK---GIGYATALAFVE-AG-------AKVTGFDQAFTQ-----EQYP--FATEVMDVADAAQVAQVC 65 (250)
T ss_dssp CCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESCCCS-----SCCS--SEEEECCTTCHHHHHHHH
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEeCchhh-----hcCC--ceEEEcCCCCHHHHHHHH
Confidence 47788999999753 444445555544 36 368888875211 0010 001111212223455555
Q ss_pred ccc-----CCcEEEeccCCC
Q 007703 408 KVI-----KPTILIGSSGVG 422 (592)
Q Consensus 408 ~~v-----kPtvLIG~S~~~ 422 (592)
+.+ ++|+||=..+..
T Consensus 66 ~~~~~~~g~id~lv~~Ag~~ 85 (250)
T 2fwm_X 66 QRLLAETERLDALVNAAGIL 85 (250)
T ss_dssp HHHHHHCSCCCEEEECCCCC
T ss_pred HHHHHHcCCCCEEEECCCcC
Confidence 544 799999776643
No 444
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=47.25 E-value=21 Score=33.64 Aligned_cols=78 Identities=13% Similarity=0.174 Sum_probs=43.3
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhh------cc-ccCC
Q 007703 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW------AH-EHEP 399 (592)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~f------A~-~~~~ 399 (592)
.++++.++||.||.. ||...++..+.+ .| .+++++|++- . .+....+.+ .. |-..
T Consensus 8 ~~~~~k~vlVTGasg---giG~~~a~~l~~-~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~D~~~ 69 (265)
T 2o23_A 8 RSVKGLVAVITGGAS---GLGLATAERLVG-QG-------ASAVLLDLPN----S---GGEAQAKKLGNNCVFAPADVTS 69 (265)
T ss_dssp CCCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEECTT----S---SHHHHHHHHCTTEEEEECCTTC
T ss_pred cCCCCCEEEEECCCC---hHHHHHHHHHHH-CC-------CEEEEEeCCc----H---hHHHHHHHhCCceEEEEcCCCC
Confidence 467889999999842 444555555554 36 3688887741 1 122221111 00 1112
Q ss_pred CCCHHHHhccc-----CCcEEEeccCCC
Q 007703 400 VNNLLDAVKVI-----KPTILIGSSGVG 422 (592)
Q Consensus 400 ~~~L~e~V~~v-----kPtvLIG~S~~~ 422 (592)
..++.++++.+ ++|+||=..+..
T Consensus 70 ~~~v~~~~~~~~~~~g~id~li~~Ag~~ 97 (265)
T 2o23_A 70 EKDVQTALALAKGKFGRVDVAVNCAGIA 97 (265)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHCCCCCEEEECCccC
Confidence 23455666654 799999776654
No 445
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=47.16 E-value=18 Score=38.23 Aligned_cols=37 Identities=19% Similarity=0.352 Sum_probs=28.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
..+|||+|||.||+..|..+.+. |. ...++.++|+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-----g~----~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-----YG----DANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----HG----GGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-----CC----CCCeEEEEECCC
Confidence 47899999999999999988764 20 125789999864
No 446
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=47.16 E-value=13 Score=36.17 Aligned_cols=77 Identities=12% Similarity=0.242 Sum_probs=43.2
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhh-------ccccCCC
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW-------AHEHEPV 400 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~f-------A~~~~~~ 400 (592)
+|+++++||.||++ ||...++..+.+ .| .+++++|++- +.+......+ .-|-...
T Consensus 13 ~l~gk~vlVTGas~---gIG~~~a~~L~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dl~d~ 74 (291)
T 3rd5_A 13 SFAQRTVVITGANS---GLGAVTARELAR-RG-------ATVIMAVRDT-------RKGEAAARTMAGQVEVRELDLQDL 74 (291)
T ss_dssp CCTTCEEEEECCSS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHTTSSSEEEEEECCTTCH
T ss_pred CCCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEECCH-------HHHHHHHHHhcCCeeEEEcCCCCH
Confidence 57788999999853 444455555544 36 3688888741 1111111111 1121222
Q ss_pred CCHHHHhccc-CCcEEEeccCCC
Q 007703 401 NNLLDAVKVI-KPTILIGSSGVG 422 (592)
Q Consensus 401 ~~L~e~V~~v-kPtvLIG~S~~~ 422 (592)
.++.++++.+ ++|+||=..+..
T Consensus 75 ~~v~~~~~~~~~iD~lv~nAg~~ 97 (291)
T 3rd5_A 75 SSVRRFADGVSGADVLINNAGIM 97 (291)
T ss_dssp HHHHHHHHTCCCEEEEEECCCCC
T ss_pred HHHHHHHHhcCCCCEEEECCcCC
Confidence 3566677766 789999777654
No 447
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=47.08 E-value=37 Score=34.33 Aligned_cols=45 Identities=16% Similarity=0.049 Sum_probs=28.2
Q ss_pred HHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc
Q 007703 319 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (592)
Q Consensus 319 l~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (592)
+.++......-.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 180 ~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 224 (373)
T 1p0f_A 180 YGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKA-----AGA------SRIIGVGT 224 (373)
T ss_dssp HHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred HHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 3344333334457899999999877666554432 263 46888875
No 448
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=46.98 E-value=33 Score=33.26 Aligned_cols=105 Identities=15% Similarity=0.180 Sum_probs=55.6
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCch----hchhhcc-ccCCCC
Q 007703 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH----FKKPWAH-EHEPVN 401 (592)
Q Consensus 328 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~----~k~~fA~-~~~~~~ 401 (592)
+-...||+|.|| |-.|..+++.|++ .| .+++.+|+..- ......+.. ....+.. +-....
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 76 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLE-----KG-------YRVHGLVARRS--SDTRWRLRELGIEGDIQYEDGDMADAC 76 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCCS--SCCCHHHHHTTCGGGEEEEECCTTCHH
T ss_pred cccCCeEEEECCCChHHHHHHHHHHH-----CC-------CeEEEEeCCCc--cccccchhhccccCceEEEECCCCCHH
Confidence 345678999987 6677767666654 25 46888887421 000000100 0111111 112224
Q ss_pred CHHHHhcccCCcEEEeccCCCCC---C-------------CHHHHHHHHccC-CCCceEEecC
Q 007703 402 NLLDAVKVIKPTILIGSSGVGRT---F-------------TKEVIEAMASFN-EVKPLILALS 447 (592)
Q Consensus 402 ~L~e~V~~vkPtvLIG~S~~~g~---F-------------t~evv~~Ma~~~-e~rPIIFaLS 447 (592)
++.++++.+++|++|=+.+.... . |..+++++.+.. . +.+||.=|
T Consensus 77 ~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~v~~SS 138 (335)
T 1rpn_A 77 SVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPE-TRFYQAST 138 (335)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTT-SEEEEEEE
T ss_pred HHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCC-CeEEEEeC
Confidence 57788888899999988775431 0 234666666543 3 56777543
No 449
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=46.92 E-value=54 Score=31.41 Aligned_cols=94 Identities=14% Similarity=0.158 Sum_probs=52.2
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 007703 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (592)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~v 410 (592)
||+|.|| |-.|..+++.|++ .| .+++.+|+..- .....+. ....+.. +-.+.. +.++++.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~-~~~~~~~~Dl~d~~-~~~~~~~- 63 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVE-----LG-------YEVVVVDNLSS---GRREFVN-PSAELHVRDLKDYS-WGAGIKG- 63 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCSS---CCGGGSC-TTSEEECCCTTSTT-TTTTCCC-
T ss_pred EEEEECCCChHHHHHHHHHHh-----CC-------CEEEEEeCCCC---CchhhcC-CCceEEECccccHH-HHhhcCC-
Confidence 7999998 8788878777764 25 36888876411 1111011 1111111 211222 5555553
Q ss_pred CCcEEEeccCCCCCC----------------CHHHHHHHHccCCCCceEEecC
Q 007703 411 KPTILIGSSGVGRTF----------------TKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 411 kPtvLIG~S~~~g~F----------------t~evv~~Ma~~~e~rPIIFaLS 447 (592)
|++|=+.+....- |..+++++.+..- +.|||.=|
T Consensus 64 --d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~iv~~SS 113 (312)
T 3ko8_A 64 --DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGV-RTVVFASS 113 (312)
T ss_dssp --SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTC-CEEEEEEE
T ss_pred --CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCC-CEEEEeCc
Confidence 9999877743211 2356777766666 78888655
No 450
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=46.85 E-value=15 Score=39.21 Aligned_cols=24 Identities=29% Similarity=0.457 Sum_probs=20.6
Q ss_pred cccceEEEeCcChHHHHHHHHHHH
Q 007703 329 LAEHRFLFLGAGEAGTGIAELIAL 352 (592)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~ 352 (592)
-.+..|+|+|||.+|+-.|-.|.+
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~ 32 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRL 32 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHH
Confidence 456789999999999999988865
No 451
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=46.83 E-value=17 Score=36.61 Aligned_cols=20 Identities=35% Similarity=0.549 Sum_probs=18.0
Q ss_pred eEEEeCcChHHHHHHHHHHH
Q 007703 333 RFLFLGAGEAGTGIAELIAL 352 (592)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~ 352 (592)
+|+|+|||.||+..|-.|.+
T Consensus 2 dV~IVGaG~aGl~~A~~L~~ 21 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQ 21 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHh
Confidence 69999999999999988765
No 452
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=46.77 E-value=73 Score=31.48 Aligned_cols=101 Identities=15% Similarity=0.218 Sum_probs=58.5
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCch-hchhhcc-ccC-CCCCH
Q 007703 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAH-EHE-PVNNL 403 (592)
Q Consensus 328 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~-~k~~fA~-~~~-~~~~L 403 (592)
++...||+|.|| |-.|..+++.|++. .| .+++.+|+.. ++...+.. .+..+.. +-. ...++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~----~~~~~~~~~~~v~~~~~Dl~~d~~~~ 85 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT----DRLGDLVKHERMHFFEGDITINKEWV 85 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC----TTTGGGGGSTTEEEEECCTTTCHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh----hhhhhhccCCCeEEEeCccCCCHHHH
Confidence 466789999996 88888888877652 23 4788888742 11111111 1111211 212 22357
Q ss_pred HHHhcccCCcEEEeccCCCC----------------CCCHHHHHHHHccCCCCceEEecC
Q 007703 404 LDAVKVIKPTILIGSSGVGR----------------TFTKEVIEAMASFNEVKPLILALS 447 (592)
Q Consensus 404 ~e~V~~vkPtvLIG~S~~~g----------------~Ft~evv~~Ma~~~e~rPIIFaLS 447 (592)
.++++ ++|++|=+.+... .-|..+++++.+.. +.+||.=|
T Consensus 86 ~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS 141 (372)
T 3slg_A 86 EYHVK--KCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPST 141 (372)
T ss_dssp HHHHH--HCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECC
T ss_pred HHHhc--cCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCc
Confidence 77787 4999997666432 22567888887654 56777655
No 453
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=46.65 E-value=33 Score=32.71 Aligned_cols=38 Identities=26% Similarity=0.295 Sum_probs=25.5
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.+|+++++||.||++ ||...++..+.++ | -+++++|++
T Consensus 8 ~~l~~k~vlVTGas~---gIG~~ia~~l~~~-G-------~~V~~~~r~ 45 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAA---GIGRAIAGTFAKA-G-------ASVVVTDLK 45 (256)
T ss_dssp TCCTTCEEEECSCSS---HHHHHHHHHHHHH-T-------CEEEEEESS
T ss_pred CCCCCCEEEEECCCC---HHHHHHHHHHHHC-C-------CEEEEEeCC
Confidence 458889999999864 4444555555443 6 358888874
No 454
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=46.48 E-value=39 Score=32.60 Aligned_cols=37 Identities=16% Similarity=0.294 Sum_probs=24.3
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+|+++++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 25 ~l~gk~vlVTGas~---gIG~aia~~la~-~G-------~~V~~~~r~ 61 (266)
T 3uxy_A 25 GFEGKVALVTGAAG---GIGGAVVTALRA-AG-------ARVAVADRA 61 (266)
T ss_dssp -CTTCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEECSSC
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 47788999999854 444555555554 36 368888764
No 455
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=46.46 E-value=17 Score=38.25 Aligned_cols=34 Identities=26% Similarity=0.286 Sum_probs=27.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
+.+|+|+|||.||+..|..+.+ .| .++.++|++.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~-----~G-------~~V~liE~~~ 39 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAAD-----EG-------LKVAIVERYK 39 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCCC
Confidence 4589999999999999977754 35 3689999853
No 456
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=46.41 E-value=15 Score=39.11 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
+..|+|+|||.+|+..|-.|.+ .|+ ++.++|++-
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~-----~G~-------~v~viEr~~ 38 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLAR-----QGV-------RVLVVERRP 38 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 5689999999999999988764 364 577888763
No 457
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=46.40 E-value=19 Score=34.69 Aligned_cols=36 Identities=17% Similarity=0.396 Sum_probs=25.7
Q ss_pred CcccceEEEeCcCh---HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 328 TLAEHRFLFLGAGE---AGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 328 ~l~d~riv~~GAGs---Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+|+++++||-||++ .|.+||+.+++ +| -+++++|++
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~-----~G-------a~Vvi~~r~ 41 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQ-----LG-------AKLVFTYRK 41 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHH-----CC-------CEEEEEECC
Confidence 68999999999854 45556665543 37 368888875
No 458
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=46.36 E-value=33 Score=32.83 Aligned_cols=37 Identities=19% Similarity=0.285 Sum_probs=25.6
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+|+++++||.||++ ||...++..+.+ .| -+++++|+.
T Consensus 7 ~l~gk~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~~~ 43 (287)
T 3pxx_A 7 RVQDKVVLVTGGAR---GQGRSHAVKLAE-EG-------ADIILFDIC 43 (287)
T ss_dssp TTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEECC
T ss_pred ccCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CeEEEEccc
Confidence 57889999999864 444455555554 36 368889876
No 459
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=46.29 E-value=28 Score=32.23 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=20.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+.+++|.||+. ||...++..+.+ .| .+++++|++
T Consensus 5 ~k~vlVtGasg---giG~~~a~~l~~-~G-------~~V~~~~r~ 38 (234)
T 2ehd_A 5 KGAVLITGASR---GIGEATARLLHA-KG-------YRVGLMARD 38 (234)
T ss_dssp CCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEECC
Confidence 46799998743 444445555544 36 358888764
No 460
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=46.29 E-value=46 Score=33.57 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=23.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+++++|.|||..|..++.++.. .| | +++.+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~-----~G-----a--~Vi~~~~~ 213 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRT-----YG-----L--EVWMANRR 213 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHH-----HT-----C--EEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-----C--EEEEEeCC
Confidence 8999999997777666655543 25 2 68888763
No 461
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=45.99 E-value=16 Score=35.04 Aligned_cols=78 Identities=14% Similarity=0.159 Sum_probs=42.0
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhh-------ccccCC
Q 007703 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW-------AHEHEP 399 (592)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~f-------A~~~~~ 399 (592)
.+|++.+++|.||+. ||...++..+.+ .| .+++++|++. +.+......+ .-|-..
T Consensus 3 ~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~~ 64 (260)
T 1nff_A 3 GRLTGKVALVSGGAR---GMGASHVRAMVA-EG-------AKVVFGDILD-------EEGKAMAAELADAARYVHLDVTQ 64 (260)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHHTGGGEEEEECCTTC
T ss_pred CCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHhhcCceEEEecCCC
Confidence 357788999999754 444445555544 36 3688887641 1111111111 112122
Q ss_pred CCCHHHHhccc-----CCcEEEeccCCC
Q 007703 400 VNNLLDAVKVI-----KPTILIGSSGVG 422 (592)
Q Consensus 400 ~~~L~e~V~~v-----kPtvLIG~S~~~ 422 (592)
..++.++++.+ ++|+||=..+..
T Consensus 65 ~~~v~~~~~~~~~~~g~iD~lv~~Ag~~ 92 (260)
T 1nff_A 65 PAQWKAAVDTAVTAFGGLHVLVNNAGIL 92 (260)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455566544 799999776643
No 462
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=45.98 E-value=44 Score=31.98 Aligned_cols=77 Identities=21% Similarity=0.289 Sum_probs=39.8
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHH
Q 007703 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (592)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 406 (592)
.++.+.++||.||+. ||...++..+.+ .| .+++++|++. +.+... ..+.-|-....++.++
T Consensus 17 ~~l~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~-------~~~~~~-~~~~~Dl~d~~~v~~~ 77 (253)
T 2nm0_A 17 RSHMSRSVLVTGGNR---GIGLAIARAFAD-AG-------DKVAITYRSG-------EPPEGF-LAVKCDITDTEQVEQA 77 (253)
T ss_dssp ---CCCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESSS-------CCCTTS-EEEECCTTSHHHHHHH
T ss_pred cCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh-------Hhhccc-eEEEecCCCHHHHHHH
Confidence 346678999999853 444555555554 36 3688887742 112221 0111121222344455
Q ss_pred hccc-----CCcEEEeccCCC
Q 007703 407 VKVI-----KPTILIGSSGVG 422 (592)
Q Consensus 407 V~~v-----kPtvLIG~S~~~ 422 (592)
++.+ ++|+||=..+..
T Consensus 78 ~~~~~~~~g~iD~lv~nAg~~ 98 (253)
T 2nm0_A 78 YKEIEETHGPVEVLIANAGVT 98 (253)
T ss_dssp HHHHHHHTCSCSEEEEECSCC
T ss_pred HHHHHHHcCCCCEEEECCCCC
Confidence 5543 689999766643
No 463
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=45.88 E-value=20 Score=34.27 Aligned_cols=35 Identities=20% Similarity=0.332 Sum_probs=23.8
Q ss_pred cccceEEEeCcC---hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 329 LAEHRFLFLGAG---EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 329 l~d~riv~~GAG---sAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
++++++||.||+ -.|..+|+.+++ .| -+++++|++
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~-----~G-------~~V~~~~r~ 44 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHR-----EG-------AELAFTYQN 44 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHH-----CC-------CEEEEEcCc
Confidence 678899999985 445555555543 36 358888875
No 464
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=45.83 E-value=18 Score=37.83 Aligned_cols=35 Identities=23% Similarity=0.432 Sum_probs=28.2
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
-...+|+|+|||.||+..|..|.++ | .++.++++.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~-----G-------~~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA-----G-------HDVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT-----S-------CEEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEecc
Confidence 3467999999999999999888653 6 368888876
No 465
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=45.82 E-value=17 Score=37.31 Aligned_cols=34 Identities=24% Similarity=0.493 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
+.+|+|+|||.+|+..|..|.+ .| .++.++|+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~-----~g-------~~v~v~E~~~ 36 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAE-----KG-------HQVHIIDQRD 36 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEESSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CC-------CcEEEEEecC
Confidence 4689999999999999988764 24 5788888753
No 466
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=45.75 E-value=19 Score=34.31 Aligned_cols=38 Identities=26% Similarity=0.370 Sum_probs=24.5
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.+|+++++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 2 ~~l~gk~vlVTGas~---gIG~a~a~~l~~-~G-------~~V~~~~r~ 39 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQ---GIGKAIAARLAA-DG-------ATVIVSDIN 39 (247)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEECSC
T ss_pred CCcCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357889999999853 444444454444 36 368887764
No 467
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=45.58 E-value=25 Score=33.91 Aligned_cols=38 Identities=21% Similarity=0.263 Sum_probs=26.3
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.+|+++++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 7 ~~l~~k~~lVTGas~---gIG~aia~~la~-~G-------~~V~~~~~~ 44 (286)
T 3uve_A 7 GRVEGKVAFVTGAAR---GQGRSHAVRLAQ-EG-------ADIIAVDIC 44 (286)
T ss_dssp CTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEECC
T ss_pred cccCCCEEEEeCCCc---hHHHHHHHHHHH-CC-------CeEEEEecc
Confidence 468889999999864 444455555554 36 468888875
No 468
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=45.55 E-value=36 Score=34.76 Aligned_cols=49 Identities=18% Similarity=0.099 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc
Q 007703 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (592)
Q Consensus 314 ~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (592)
.++..+.|++.. ..-.+++|+|+|||..|...+.+.. + .|. ++++.+|+
T Consensus 170 ~~~ta~~al~~~-~~~~g~~VlV~GaG~vG~~aiqlAk-~----~Ga------~~Vi~~~~ 218 (398)
T 1kol_A 170 ILPTGYHGAVTA-GVGPGSTVYVAGAGPVGLAAAASAR-L----LGA------AVVIVGDL 218 (398)
T ss_dssp HHHHHHHHHHHT-TCCTTCEEEEECCSHHHHHHHHHHH-H----TTC------SEEEEEES
T ss_pred HHHHHHHHHHHc-CCCCCCEEEEECCcHHHHHHHHHHH-H----CCC------CeEEEEcC
Confidence 344556667643 3345789999999887766554433 2 364 57888876
No 469
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=45.42 E-value=12 Score=37.98 Aligned_cols=34 Identities=18% Similarity=0.445 Sum_probs=26.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (592)
..++||+|+|.||+..|..+.+ .| ++.++|+.-.
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~-----~g--------~V~lie~~~~ 41 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQ-----TY--------EVTVIDKEPV 41 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTT-----TS--------EEEEECSSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhh-----cC--------CEEEEECCCC
Confidence 4589999999999999987742 12 7999998654
No 470
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=45.34 E-value=17 Score=40.76 Aligned_cols=35 Identities=23% Similarity=0.418 Sum_probs=28.2
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
...+|||+|||.||+..|..+.. .| .++.++|+..
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~-----~G-------~~Vtlie~~~ 422 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLME-----SG-------YTVHLTDTAE 422 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 34689999999999999998865 25 3689998853
No 471
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=45.27 E-value=17 Score=38.21 Aligned_cols=22 Identities=23% Similarity=0.407 Sum_probs=19.5
Q ss_pred cceEEEeCcChHHHHHHHHHHH
Q 007703 331 EHRFLFLGAGEAGTGIAELIAL 352 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~ 352 (592)
..+|+|+|||.||+..|..|.+
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~ 25 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHD 25 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHH
Confidence 4579999999999999998875
No 472
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=45.25 E-value=18 Score=35.15 Aligned_cols=33 Identities=27% Similarity=0.428 Sum_probs=24.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.--++|+|||.||+-.|-.+.+ .| .++.++|+.
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar-----~g-------~~v~lie~~ 38 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGR-----AR-------KQIALFDNN 38 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECS
T ss_pred CcCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEeCC
Confidence 3458999999999887754432 35 468889874
No 473
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=45.20 E-value=31 Score=34.51 Aligned_cols=44 Identities=25% Similarity=0.263 Sum_probs=29.1
Q ss_pred HHHHHHHhCCCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc
Q 007703 318 VVAALKLIGGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (592)
Q Consensus 318 ll~Alr~~g~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (592)
.+.+++..+ .-.+++++|.|| |..|..++.++.. .| -+++.+|+
T Consensus 158 a~~~l~~~~-~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G-------a~V~~~~~ 202 (347)
T 2hcy_A 158 VYKALKSAN-LMAGHWVAISGAAGGLGSLAVQYAKA-----MG-------YRVLGIDG 202 (347)
T ss_dssp HHHHHHTTT-CCTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEEC
T ss_pred HHHHHHhcC-CCCCCEEEEECCCchHHHHHHHHHHH-----CC-------CcEEEEcC
Confidence 455665543 335789999999 7777777765543 35 26888875
No 474
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=45.17 E-value=16 Score=38.31 Aligned_cols=34 Identities=26% Similarity=0.395 Sum_probs=27.5
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.+.+++|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~-----~G-------~~V~liE~~ 52 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAE-----LG-------ARAAVVESH 52 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEecC
Confidence 35689999999999999988765 25 468899965
No 475
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=45.10 E-value=69 Score=31.00 Aligned_cols=76 Identities=17% Similarity=0.167 Sum_probs=42.1
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhc----------ccc
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA----------HEH 397 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA----------~~~ 397 (592)
+|+++++||.||++ ||...++..+.+ .| -+++++|++ . +.+........ -|-
T Consensus 30 ~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~~~~Dv 91 (275)
T 4imr_A 30 GLRGRTALVTGSSR---GIGAAIAEGLAG-AG-------AHVILHGVK----P---GSTAAVQQRIIASGGTAQELAGDL 91 (275)
T ss_dssp CCTTCEEEETTCSS---HHHHHHHHHHHH-TT-------CEEEEEESS----T---TTTHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEcCC----H---HHHHHHHHHHHhcCCeEEEEEecC
Confidence 47788999999853 444445555554 36 368888874 1 12322222221 122
Q ss_pred CCCCCHHHHhccc----CCcEEEeccCC
Q 007703 398 EPVNNLLDAVKVI----KPTILIGSSGV 421 (592)
Q Consensus 398 ~~~~~L~e~V~~v----kPtvLIG~S~~ 421 (592)
....++.++++.+ +.|+||=..+.
T Consensus 92 ~~~~~~~~~~~~~~~~g~iD~lvnnAg~ 119 (275)
T 4imr_A 92 SEAGAGTDLIERAEAIAPVDILVINASA 119 (275)
T ss_dssp TSTTHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 2223445555443 79999977664
No 476
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=44.99 E-value=22 Score=37.54 Aligned_cols=32 Identities=25% Similarity=0.377 Sum_probs=26.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD 373 (592)
+.+++|+|||.||+..|..+.+. .| .++.++|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASL----HK-------KRVAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHH----cC-------CEEEEEe
Confidence 45899999999999999988751 15 4799999
No 477
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=44.93 E-value=60 Score=31.49 Aligned_cols=38 Identities=21% Similarity=0.328 Sum_probs=25.7
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.+++++++||.||++ ||...++..+.+ .| .+++++|++
T Consensus 5 m~l~~k~vlVTGas~---GIG~aia~~l~~-~G-------~~V~~~~r~ 42 (285)
T 3sc4_A 5 MSLRGKTMFISGGSR---GIGLAIAKRVAA-DG-------ANVALVAKS 42 (285)
T ss_dssp -CCTTCEEEEESCSS---HHHHHHHHHHHT-TT-------CEEEEEESC
T ss_pred cCCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEECC
Confidence 357889999999864 444555555554 36 368888875
No 478
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=44.86 E-value=9.5 Score=39.19 Aligned_cols=81 Identities=16% Similarity=0.214 Sum_probs=46.4
Q ss_pred ceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 007703 332 HRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (592)
Q Consensus 332 ~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 410 (592)
.||.|+|+| .+|...+..+.. ..++ +-+.++|++ .+......+.| .-+...++.|+++.-
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~----~~~~------~l~av~d~~-------~~~~~~~a~~~--g~~~~~~~~ell~~~ 63 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRH----HPDA------QIVAACDPN-------EDVRERFGKEY--GIPVFATLAEMMQHV 63 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHH----CTTE------EEEEEECSC-------HHHHHHHHHHH--TCCEESSHHHHHHHS
T ss_pred eEEEEEeCCHHHHHHHHHHHHh----CCCe------EEEEEEeCC-------HHHHHHHHHHc--CCCeECCHHHHHcCC
Confidence 589999999 888777766543 1121 234456652 11111222222 112347899999988
Q ss_pred CCcEEEeccCCCCCCCHHHHHHH
Q 007703 411 KPTILIGSSGVGRTFTKEVIEAM 433 (592)
Q Consensus 411 kPtvLIG~S~~~g~Ft~evv~~M 433 (592)
++|+++ +++.. .+..+++...
T Consensus 64 ~vD~V~-i~tp~-~~H~~~~~~a 84 (387)
T 3moi_A 64 QMDAVY-IASPH-QFHCEHVVQA 84 (387)
T ss_dssp CCSEEE-ECSCG-GGHHHHHHHH
T ss_pred CCCEEE-EcCCc-HHHHHHHHHH
Confidence 899988 55544 3444554443
No 479
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=44.83 E-value=1.4e+02 Score=30.50 Aligned_cols=131 Identities=13% Similarity=0.172 Sum_probs=84.2
Q ss_pred HHHhcCCCeeeeeecCCCchHHHHHHHHcCCCceec--cCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHH
Q 007703 269 VKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGI 346 (592)
Q Consensus 269 v~~~fGp~~lIqfEDf~~~~Af~lL~ryr~~~~~FN--DDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GI 346 (592)
+-.+| .+++ -+-.++ +.+.+.|.+|-.++||.| |...---.=+||=++.-.+..| +|++.||+++|-|.=+ -+
T Consensus 94 vls~~-~D~i-viR~~~-~~~~~~la~~~~~vPVINag~G~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~~~-rv 168 (310)
T 3csu_A 94 VISTY-VDAI-VMRHPQ-EGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQG-RLDNLHVAMVGDLKYG-RT 168 (310)
T ss_dssp HHTTT-CSEE-EEEESS-TTHHHHHHHHCTTCCEEEEEETTSCCHHHHHHHHHHHHHHHS-CSSSCEEEEESCTTTC-HH
T ss_pred HHHHh-CCEE-EEECCC-hhHHHHHHHhcCCCCEEcCccCCCCCchHHHHHHHHHHHHhC-CcCCcEEEEECCCCCC-ch
Confidence 44567 4543 355565 456677788865799999 4234444556777777666654 7999999999987421 36
Q ss_pred HHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcccc----CCCCCHHHHhcccCCcEEEeccC
Q 007703 347 AELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTILIGSSG 420 (592)
Q Consensus 347 A~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~----~~~~~L~e~V~~vkPtvLIG~S~ 420 (592)
|+-++.++.+-.|+ +|.++-.+|+--. +.-..+|+.. ....++.|+|+. .||+.-..-
T Consensus 169 a~Sl~~~~~~~~g~-------~v~~~~P~~~~~~-------~~~~~~~~~~g~~~~~~~d~~eav~~--aDvvyt~~~ 230 (310)
T 3csu_A 169 VHSLTQALAKFDGN-------RFYFIAPDALAMP-------QYILDMLDEKGIAWSLHSSIEEVMAE--VDILYMTRV 230 (310)
T ss_dssp HHHHHHHHHTSSSC-------EEEEECCGGGCCC-------HHHHHHHHHTTCCEEECSCGGGTTTT--CSEEEECC-
T ss_pred HHHHHHHHHhCCCC-------EEEEECCcccccC-------HHHHHHHHHcCCeEEEEcCHHHHhcC--CCEEEECCc
Confidence 77777777652264 6888888887332 2222333321 123689999987 999997654
No 480
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=44.74 E-value=15 Score=37.29 Aligned_cols=96 Identities=13% Similarity=0.072 Sum_probs=51.4
Q ss_pred ccceEEEeC-cChHHHH-HH----HHHHHHHHHhcCCChhhh---cCcEEEEccCCcccCCCccCCchhchhhcccc--C
Q 007703 330 AEHRFLFLG-AGEAGTG-IA----ELIALEISKQTKAPVEET---RKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--E 398 (592)
Q Consensus 330 ~d~riv~~G-AGsAg~G-IA----~ll~~~~~~~~G~s~eeA---~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~--~ 398 (592)
+..||.|+| +|..|.+ .+ +.+.. ..++....+ .-++.++|++ . +..+.+|... +
T Consensus 5 ~~irigiiG~~G~~g~~~h~~~~~~~~~~----~~~~~l~~~~~~~~~~av~~~~-------~----~~a~~~a~~~~~~ 69 (383)
T 3oqb_A 5 QRLGLIMNGVTGRMGLNQHLIRSIVAIRD----QGGVRLKNGDRIMPDPILVGRS-------A----EKVEALAKRFNIA 69 (383)
T ss_dssp EEEEEEEESTTSTHHHHTTTTTTHHHHHH----HTSEECTTSCEEEEEEEEECSS-------S----HHHHHHHHHTTCC
T ss_pred ceeEEEEEeccchhhhhhhHHHHHHHHhh----cCceeecCCcccceeeEEEcCC-------H----HHHHHHHHHhCCC
Confidence 446999999 9999987 66 44432 222211000 0011244442 1 1223344321 1
Q ss_pred -CCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHccCCCCceEE
Q 007703 399 -PVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEVKPLIL 444 (592)
Q Consensus 399 -~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~e~rPIIF 444 (592)
-..++.|+++.-++|+++ +++.. .+..+++++..+. - ++|+.
T Consensus 70 ~~~~~~~~ll~~~~iD~V~-i~tp~-~~h~~~~~~al~~-G-k~V~~ 112 (383)
T 3oqb_A 70 RWTTDLDAALADKNDTMFF-DAATT-QARPGLLTQAINA-G-KHVYC 112 (383)
T ss_dssp CEESCHHHHHHCSSCCEEE-ECSCS-SSSHHHHHHHHTT-T-CEEEE
T ss_pred cccCCHHHHhcCCCCCEEE-ECCCc-hHHHHHHHHHHHC-C-CeEEE
Confidence 137899999988899887 55544 5666665554432 2 45443
No 481
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=44.68 E-value=13 Score=36.55 Aligned_cols=33 Identities=21% Similarity=0.515 Sum_probs=26.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
...|+|+|||.+|+.+|-.|. . | .++.++|+..
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~-----G-------~~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-A-----H-------GRVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-T-----T-------SCEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-C-----C-------CCEEEEECCC
Confidence 568999999999999998775 1 5 3688999874
No 482
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=44.68 E-value=18 Score=35.61 Aligned_cols=99 Identities=18% Similarity=0.151 Sum_probs=57.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC--CcccCCCccCCchhchhhccccCCCCCHHHHhcc
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK--GLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~--GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~ 409 (592)
.||.|+|+|+-|..+|..|... | .+++++|+. ++-.... +. ..+. . -..+..+++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~-----g-------~~V~~~~r~~~~~~~~~~-~g----~~~~--~--~~~~~~~~~~- 60 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS-----L-------PHTTLIGRHAKTITYYTV-PH----APAQ--D--IVVKGYEDVT- 60 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-----C-------TTCEEEESSCEEEEEESS-TT----SCCE--E--EEEEEGGGCC-
T ss_pred cEEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEEeccCcEEEEec-CC----eecc--c--eecCchHhcC-
Confidence 4899999999999999988754 5 357777764 1111000 00 0000 0 0012223331
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHccC-CCCceEEecCCCCCCCCC
Q 007703 410 IKPTILIGSSGVGRTFTKEVIEAMASFN-EVKPLILALSNPTSQSEC 455 (592)
Q Consensus 410 vkPtvLIG~S~~~g~Ft~evv~~Ma~~~-e~rPIIFaLSNPt~~aEc 455 (592)
-.+|++| ++..+ ..++++++.++.+. + ..+|..+.|-....|.
T Consensus 61 ~~~D~vi-lavk~-~~~~~~l~~l~~~l~~-~~~iv~~~nGi~~~~~ 104 (294)
T 3g17_A 61 NTFDVII-IAVKT-HQLDAVIPHLTYLAHE-DTLIILAQNGYGQLEH 104 (294)
T ss_dssp SCEEEEE-ECSCG-GGHHHHGGGHHHHEEE-EEEEEECCSSCCCGGG
T ss_pred CCCCEEE-EeCCc-cCHHHHHHHHHHhhCC-CCEEEEeccCcccHhh
Confidence 1367666 44433 35788888887543 4 6788999998865543
No 483
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=44.68 E-value=19 Score=37.42 Aligned_cols=34 Identities=12% Similarity=0.200 Sum_probs=27.3
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
+|||+|||.||+..|..+.+.. .| .++.++|+..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADH---PD-------ADVTAYEMND 35 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCC
Confidence 6999999999999999887531 13 5799999865
No 484
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=44.67 E-value=13 Score=36.67 Aligned_cols=82 Identities=10% Similarity=0.135 Sum_probs=45.0
Q ss_pred ccceEEEeCcChHHHH-HHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhc
Q 007703 330 AEHRFLFLGAGEAGTG-IAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 408 (592)
Q Consensus 330 ~d~riv~~GAGsAg~G-IA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~ 408 (592)
+-.||.|+|+|..|.. .++.+.. ..|. +-+.++|++ .+......+.|- .+...++.|+++
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~----~~~~------~l~av~d~~-------~~~~~~~a~~~~--~~~~~~~~~ll~ 65 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTK----SERF------EFVGAFTPN-------KVKREKICSDYR--IMPFDSIESLAK 65 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTS----CSSS------EEEEEECSC-------HHHHHHHHHHHT--CCBCSCHHHHHT
T ss_pred ccCcEEEEecCHHHHHHHHHHHHh----CCCe------EEEEEECCC-------HHHHHHHHHHcC--CCCcCCHHHHHh
Confidence 3469999999988865 5554421 1121 223366652 111222222221 122578999998
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHH
Q 007703 409 VIKPTILIGSSGVGRTFTKEVIEAMA 434 (592)
Q Consensus 409 ~vkPtvLIG~S~~~g~Ft~evv~~Ma 434 (592)
++|+++ +++... ...+++....
T Consensus 66 --~~D~V~-i~tp~~-~h~~~~~~al 87 (308)
T 3uuw_A 66 --KCDCIF-LHSSTE-THYEIIKILL 87 (308)
T ss_dssp --TCSEEE-ECCCGG-GHHHHHHHHH
T ss_pred --cCCEEE-EeCCcH-hHHHHHHHHH
Confidence 799988 555443 4555554433
No 485
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=44.49 E-value=19 Score=37.48 Aligned_cols=21 Identities=14% Similarity=0.347 Sum_probs=19.0
Q ss_pred ceEEEeCcChHHHHHHHHHHH
Q 007703 332 HRFLFLGAGEAGTGIAELIAL 352 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~ 352 (592)
.+|+|+|||.||+..|..|.+
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~ 60 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTV 60 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHH
Confidence 589999999999999988865
No 486
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=44.48 E-value=18 Score=35.51 Aligned_cols=37 Identities=24% Similarity=0.293 Sum_probs=25.2
Q ss_pred CCcccceEEEeCcCh---HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 327 GTLAEHRFLFLGAGE---AGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 327 ~~l~d~riv~~GAGs---Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
..|+++++||.||++ .|..+|+.+++ .| -+++++|++
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~-----~G-------~~V~~~~r~ 66 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAARE-----AG-------AELAFTYQG 66 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHH-----TT-------CEEEEEECS
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHH-----CC-------CEEEEEcCC
Confidence 458889999999964 45555555543 36 358888775
No 487
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=44.40 E-value=31 Score=34.57 Aligned_cols=48 Identities=21% Similarity=0.082 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcc
Q 007703 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (592)
Q Consensus 314 ~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (592)
.++..+.|++..+. -.+++++|.|||..|...+.+... .|. +++.+|+
T Consensus 153 ~~~ta~~al~~~~~-~~g~~VlV~GaG~vG~~a~qla~~-----~Ga-------~Vi~~~~ 200 (352)
T 1e3j_A 153 PLSVGVHACRRAGV-QLGTTVLVIGAGPIGLVSVLAAKA-----YGA-------FVVCTAR 200 (352)
T ss_dssp HHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred hHHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEcC
Confidence 44445566655443 356899999998766655544332 363 3777775
No 488
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=44.38 E-value=1.6e+02 Score=30.91 Aligned_cols=137 Identities=15% Similarity=0.157 Sum_probs=89.3
Q ss_pred HHHHHHHHHhcCCCeeeeeecC---------CCchHHHHHHHHcCCCceec--cCCcchHHHHHHHHHHHHHHhCCC-cc
Q 007703 263 DEFMSAVKQNYGEKVLIQFEDF---------ANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGT-LA 330 (592)
Q Consensus 263 defv~av~~~fGp~~lIqfEDf---------~~~~Af~lL~ryr~~~~~FN--DDiQGTaaV~LAgll~Alr~~g~~-l~ 330 (592)
.+.+. +-.+| .++++ +-.| ..+.+.+.|.+|- ++||.| ||. --.=+||=++.-.+..|.+ |+
T Consensus 116 ~DTar-vLs~y-~D~Iv-iR~~~~~~~~~~~~~~~~~~~lA~~~-~vPVINag~g~--HPtQaLaDl~TI~E~~g~~~l~ 189 (359)
T 1zq6_A 116 AEVAR-VLGRY-VDLIG-VRAFPKFVDWSKDREDQVLKSFAKYS-PVPVINMETIT--HPCQELAHALALQEHFGTPDLR 189 (359)
T ss_dssp HHHHH-HHHHH-CSEEE-EECCCCSSCHHHHTTCHHHHHHHHHC-SSCEEESSSSC--CHHHHHHHHHHHHHHHTSSCCT
T ss_pred HHHHH-HHHHh-CcEEE-EeccccccccccccchHHHHHHHHhC-CCCEEeCCCCC--CcHHHHHHHHHHHHHhCCCccc
Confidence 44444 34456 55443 4444 1456777777875 689999 777 5667788888877888865 99
Q ss_pred cce--EEEeCc----ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC-CcccCCCccCCchhchhhcccc----CC
Q 007703 331 EHR--FLFLGA----GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK-GLIVSSRKDSLQHFKKPWAHEH----EP 399 (592)
Q Consensus 331 d~r--iv~~GA----GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~-GLv~~~R~~~l~~~k~~fA~~~----~~ 399 (592)
+.| |.++|- | --+|+-++.++.+ .|+ +|.++-.+ |+.-.. .+...-+.+|+.. ..
T Consensus 190 glkvvva~vGDl~~~~---nrva~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~~---~~~~~~~~~a~~~g~~v~~ 255 (359)
T 1zq6_A 190 GKKYVLTWTYHPKPLN---TAVANSALTIATR-MGM-------DVTLLCPTPDYILDE---RYMDWAAQNVAESGGSLQV 255 (359)
T ss_dssp TCEEEEEECCCSSCCC---SHHHHHHHHHHHH-TTC-------EEEEECSSGGGCCCH---HHHHHHHHHHHHHSCEEEE
T ss_pred CCeeEEEEEecccccc---cchHHHHHHHHHH-cCC-------EEEEEcCccccCCCH---HHHHHHHHHHHHcCCeEEE
Confidence 999 889988 6 3677777777766 474 68888888 774321 1111112333321 12
Q ss_pred CCCHHHHhcccCCcEEEeccCC
Q 007703 400 VNNLLDAVKVIKPTILIGSSGV 421 (592)
Q Consensus 400 ~~~L~e~V~~vkPtvLIG~S~~ 421 (592)
..++.|+|+. .||+.-..=+
T Consensus 256 ~~d~~eav~~--aDvVyt~~w~ 275 (359)
T 1zq6_A 256 SHDIDSAYAG--ADVVYAKSWG 275 (359)
T ss_dssp ECCHHHHHTT--CSEEEEECCC
T ss_pred ECCHHHHhcC--CCEEEECCcc
Confidence 3689999997 8999876543
No 489
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=44.33 E-value=15 Score=38.06 Aligned_cols=35 Identities=26% Similarity=0.274 Sum_probs=27.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (592)
+.+|+|+|||.||+..|..+.+ .| .++.++|+..-
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~-----~G-------~~V~vlEk~~~ 38 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAK-----LG-------KSVTVFDNGKK 38 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHh-----CC-------CCEEEEeCCCC
Confidence 4579999999999999987764 36 36889998653
No 490
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=44.32 E-value=16 Score=34.07 Aligned_cols=31 Identities=10% Similarity=0.272 Sum_probs=25.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
||+|+|+|..|..+|+.|.. .| .++.++|++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~-----~g-------~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLS-----RK-------YGVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 79999999999999998865 25 468889874
No 491
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=44.29 E-value=2e+02 Score=29.15 Aligned_cols=127 Identities=17% Similarity=0.161 Sum_probs=85.1
Q ss_pred HHHhcCCCeeeeeecCCCchHHHHHHHHcCCCceec--cCCcchHHHHHHHHHHHHHHhCCCcccceEEEeCc--ChHHH
Q 007703 269 VKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGA--GEAGT 344 (592)
Q Consensus 269 v~~~fGp~~lIqfEDf~~~~Af~lL~ryr~~~~~FN--DDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GA--GsAg~ 344 (592)
+-.+||.++++ +-.++...+..+|.+| .++|+.| |-..---.=+||=++.-.+..| +|++.||.++|- |+
T Consensus 85 vls~~~~D~iv-iR~~~~~~~~~~la~~-~~vPVINAG~g~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGDl~~~--- 158 (291)
T 3d6n_B 85 TFEGLGFDYVV-FRVPFVFFPYKEIVKS-LNLRLVNAGDGTHQHPSQGLIDFFTIKEHFG-EVKDLRVLYVGDIKHS--- 158 (291)
T ss_dssp HHHHTTCSEEE-EEESSCCCSCHHHHHT-CSSEEEEEEETTTBCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCTTC---
T ss_pred HHHHhcCCEEE-EEcCChHHHHHHHHHh-CCCCEEeCccCCCcCcHHHHHHHHHHHHHhC-CcCCcEEEEECCCCCC---
Confidence 45678656644 5556555544436776 4699999 4455555667777777666655 799999999998 62
Q ss_pred HHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEeccCC
Q 007703 345 GIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGV 421 (592)
Q Consensus 345 GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~ 421 (592)
-+|+-++.++.+ .|+ +|.++-.+|+.-.. +.... -.-..++.|+|+. .||+.-+-.+
T Consensus 159 rva~Sl~~~~~~-~g~-------~v~~~~P~~~~p~~----~~~~g------~~~~~d~~eav~~--aDvvy~~~~q 215 (291)
T 3d6n_B 159 RVFRSGAPLLNM-FGA-------KIGVCGPKTLIPRD----VEVFK------VDVFDDVDKGIDW--ADVVIWLRLQ 215 (291)
T ss_dssp HHHHHHHHHHHH-TTC-------EEEEESCGGGSCTT----GGGGC------EEEESSHHHHHHH--CSEEEECCCC
T ss_pred chHHHHHHHHHH-CCC-------EEEEECCchhCCch----HHHCC------CEEEcCHHHHhCC--CCEEEEeCcc
Confidence 577777777766 474 68999999884322 21110 1113689999998 8999985443
No 492
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=44.20 E-value=45 Score=31.92 Aligned_cols=38 Identities=37% Similarity=0.519 Sum_probs=25.1
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.++++.++||.||+. ||...++..+.+ .| .+++++|++
T Consensus 27 ~~l~~k~vlITGasg---gIG~~la~~L~~-~G-------~~V~~~~r~ 64 (272)
T 1yb1_A 27 KSVTGEIVLITGAGH---GIGRLTAYEFAK-LK-------SKLVLWDIN 64 (272)
T ss_dssp CCCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred cccCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEEcC
Confidence 457889999999753 444455555544 36 358888864
No 493
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=44.10 E-value=71 Score=31.85 Aligned_cols=76 Identities=13% Similarity=0.203 Sum_probs=42.3
Q ss_pred HHHHHhCCCcccceEEEe-CcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccc--
Q 007703 320 AALKLIGGTLAEHRFLFL-GAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-- 396 (592)
Q Consensus 320 ~Alr~~g~~l~d~riv~~-GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~-- 396 (592)
++++..+ ...++++||. |+|..|...+.++.. .|. +++.+|+. .. +..+++.
T Consensus 155 ~~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~-----~Ga-------~Vi~~~~~----~~--------~~~~~~~~G 209 (349)
T 3pi7_A 155 AMFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKE-----EGF-------RPIVTVRR----DE--------QIALLKDIG 209 (349)
T ss_dssp HHHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHH-----HTC-------EEEEEESC----GG--------GHHHHHHHT
T ss_pred HHHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHH-----CCC-------EEEEEeCC----HH--------HHHHHHHcC
Confidence 5666555 4445778776 777777766655543 262 57877752 11 2222221
Q ss_pred -----cCCCCCHHHHhcc----cCCcEEEeccC
Q 007703 397 -----HEPVNNLLDAVKV----IKPTILIGSSG 420 (592)
Q Consensus 397 -----~~~~~~L~e~V~~----vkPtvLIG~S~ 420 (592)
.....++.+.++. -+.|++|=+++
T Consensus 210 a~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g 242 (349)
T 3pi7_A 210 AAHVLNEKAPDFEATLREVMKAEQPRIFLDAVT 242 (349)
T ss_dssp CSEEEETTSTTHHHHHHHHHHHHCCCEEEESSC
T ss_pred CCEEEECCcHHHHHHHHHHhcCCCCcEEEECCC
Confidence 0112355555554 36899987766
No 494
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=43.85 E-value=14 Score=35.13 Aligned_cols=77 Identities=19% Similarity=0.242 Sum_probs=42.1
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhcc-------ccCCC
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-------EHEPV 400 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-------~~~~~ 400 (592)
+++++++||.||++ ||...++..+.+ .| -+++++|++- +.+......+.. |-...
T Consensus 6 ~l~gk~~lVTGas~---gIG~a~a~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~d~ 67 (248)
T 3op4_A 6 NLEGKVALVTGASR---GIGKAIAELLAE-RG-------AKVIGTATSE-------SGAQAISDYLGDNGKGMALNVTNP 67 (248)
T ss_dssp CCTTCEEEESSCSS---HHHHHHHHHHHH-TT-------CEEEEEESSH-------HHHHHHHHHHGGGEEEEECCTTCH
T ss_pred CCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHhcccceEEEEeCCCH
Confidence 57889999999864 444445555544 36 3578777641 112222211111 11122
Q ss_pred CCHHHHhccc-----CCcEEEeccCCC
Q 007703 401 NNLLDAVKVI-----KPTILIGSSGVG 422 (592)
Q Consensus 401 ~~L~e~V~~v-----kPtvLIG~S~~~ 422 (592)
.++.++++.+ ++|+||=..+..
T Consensus 68 ~~v~~~~~~~~~~~g~iD~lv~nAg~~ 94 (248)
T 3op4_A 68 ESIEAVLKAITDEFGGVDILVNNAGIT 94 (248)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455555544 799999777654
No 495
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=43.65 E-value=20 Score=36.71 Aligned_cols=34 Identities=15% Similarity=0.371 Sum_probs=26.3
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
.+.+|+|+|||.||+..|..|.+. |. ++.+++++
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~-----g~-------~v~v~E~~ 37 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA-----GL-------SVAVIEAR 37 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEECC
Confidence 356899999999999999888652 53 47777765
No 496
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=43.65 E-value=16 Score=37.89 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=27.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCc
Q 007703 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (592)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (592)
+|||+|||.||+..|..+.+.. .| .++.++|+...
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~ 36 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLH---PD-------AEIQWYEKGDF 36 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC---TT-------SEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHHhC---cC-------CeEEEEECCCc
Confidence 6999999999999999887531 13 57999998653
No 497
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=43.62 E-value=16 Score=36.87 Aligned_cols=84 Identities=18% Similarity=0.143 Sum_probs=46.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCCcccCCCccCCchhchhhccccCCCCCHHHHhccc
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 410 (592)
..||.|+|+|..|...++.+. +..|. +-+.++|++ .+......+.| ..+...++.|+++.-
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~----~~~~~------~lvav~d~~-------~~~~~~~~~~~--g~~~~~~~~~~l~~~ 65 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYT----KSEKL------KLVTCYSRT-------EDKREKFGKRY--NCAGDATMEALLARE 65 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHT----TCSSE------EEEEEECSS-------HHHHHHHHHHH--TCCCCSSHHHHHHCS
T ss_pred cceEEEEccCHHHHHHHHHHH----hCCCc------EEEEEECCC-------HHHHHHHHHHc--CCCCcCCHHHHhcCC
Confidence 368999999997765554432 21121 223466653 11122222222 123357899999877
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHc
Q 007703 411 KPTILIGSSGVGRTFTKEVIEAMAS 435 (592)
Q Consensus 411 kPtvLIG~S~~~g~Ft~evv~~Ma~ 435 (592)
++|+++ +++.. ....+++....+
T Consensus 66 ~~D~V~-i~tp~-~~h~~~~~~al~ 88 (354)
T 3db2_A 66 DVEMVI-ITVPN-DKHAEVIEQCAR 88 (354)
T ss_dssp SCCEEE-ECSCT-TSHHHHHHHHHH
T ss_pred CCCEEE-EeCCh-HHHHHHHHHHHH
Confidence 899888 44544 455565554433
No 498
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=43.57 E-value=36 Score=31.54 Aligned_cols=37 Identities=19% Similarity=0.308 Sum_probs=24.2
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
++++.+++|.||+. ||...++..+.+ .| .+++++|++
T Consensus 4 ~~~~~~vlVtGasg---giG~~la~~l~~-~G-------~~V~~~~r~ 40 (248)
T 2pnf_A 4 KLQGKVSLVTGSTR---GIGRAIAEKLAS-AG-------STVIITGTS 40 (248)
T ss_dssp CCTTCEEEETTCSS---HHHHHHHHHHHH-TT-------CEEEEEESS
T ss_pred ccCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 57788999999843 444455555544 36 368888764
No 499
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=43.52 E-value=16 Score=39.71 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=27.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccC
Q 007703 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (592)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (592)
+--|||+|||.+|+++|..+.. .|+ ++.++++.
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~-----~G~-------~V~LlEk~ 50 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQV-----RGI-------QTGLVEMN 50 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEECC
Confidence 4679999999999999987764 374 58888886
No 500
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=43.44 E-value=18 Score=38.14 Aligned_cols=36 Identities=28% Similarity=0.477 Sum_probs=27.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEccCC
Q 007703 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (592)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (592)
.+|||+|||.||+..|..+.+.- ..| .++.++|+..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~--~~G-------~~V~liE~~~ 38 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSH--PET-------TQVTVIDCDG 38 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC--TTT-------EEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--CCc-------CEEEEEeCCC
Confidence 57999999999999999886530 004 3799999874
Done!