Query 007704
Match_columns 592
No_of_seqs 368 out of 2222
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 08:25:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007704.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007704hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 1.2E-43 4.2E-48 366.1 33.2 259 332-592 42-308 (308)
2 2xn4_A Kelch-like protein 2; s 100.0 2.5E-43 8.4E-48 361.9 33.9 258 333-592 34-298 (302)
3 3ii7_A Kelch-like protein 7; p 100.0 3.9E-43 1.3E-47 361.1 32.5 258 331-591 26-292 (306)
4 2vpj_A Kelch-like protein 12; 100.0 4.9E-43 1.7E-47 359.2 32.2 259 332-592 34-299 (301)
5 4asc_A Kelch repeat and BTB do 100.0 1.2E-41 4.2E-46 351.9 29.3 256 333-591 17-295 (315)
6 1zgk_A Kelch-like ECH-associat 100.0 2.6E-41 8.9E-46 348.6 29.0 246 343-591 10-260 (308)
7 2woz_A Kelch repeat and BTB do 100.0 3.1E-41 1.1E-45 349.3 27.7 257 332-591 27-305 (318)
8 2xn4_A Kelch-like protein 2; s 100.0 2.1E-39 7.1E-44 332.7 31.4 237 352-591 10-249 (302)
9 2vpj_A Kelch-like protein 12; 100.0 1.7E-39 5.8E-44 332.8 30.5 235 355-591 12-251 (301)
10 3ii7_A Kelch-like protein 7; p 100.0 2.1E-39 7.3E-44 333.2 31.1 229 357-591 11-245 (306)
11 2uvk_A YJHT; unknown function, 100.0 2.7E-38 9.1E-43 332.1 27.2 244 343-591 5-314 (357)
12 4asc_A Kelch repeat and BTB do 100.0 6.3E-37 2.2E-41 316.6 28.4 225 357-591 4-241 (315)
13 2uvk_A YJHT; unknown function, 100.0 7.5E-37 2.6E-41 321.0 24.8 239 343-581 50-353 (357)
14 2woz_A Kelch repeat and BTB do 100.0 4.6E-36 1.6E-40 310.5 27.5 234 346-591 7-251 (318)
15 2zwa_A Leucine carboxyl methyl 100.0 1.3E-34 4.4E-39 331.7 25.4 242 345-591 386-662 (695)
16 1k3i_A Galactose oxidase precu 100.0 2.8E-31 9.5E-36 302.1 22.0 257 330-591 167-517 (656)
17 2zwa_A Leucine carboxyl methyl 100.0 5.3E-31 1.8E-35 301.7 22.6 236 331-570 414-693 (695)
18 1k3i_A Galactose oxidase precu 100.0 1.2E-27 4.2E-32 272.0 22.9 235 332-570 222-548 (656)
19 3mbr_X Glutamine cyclotransfer 97.9 0.0038 1.3E-07 61.6 24.4 192 343-555 16-225 (243)
20 3dsm_A Uncharacterized protein 97.9 0.0067 2.3E-07 61.8 27.5 194 348-570 44-252 (328)
21 3dsm_A Uncharacterized protein 97.8 0.0028 9.6E-08 64.6 21.7 198 352-570 88-301 (328)
22 3nol_A Glutamine cyclotransfer 97.5 0.012 4E-07 58.6 21.2 184 351-555 46-246 (262)
23 3mbr_X Glutamine cyclotransfer 97.5 0.0093 3.2E-07 58.7 20.0 158 399-578 25-190 (243)
24 3nok_A Glutaminyl cyclase; bet 97.4 0.015 5.1E-07 58.0 19.9 152 351-526 58-213 (268)
25 3jrp_A Fusion protein of prote 97.3 0.01 3.5E-07 59.9 18.6 198 358-581 69-299 (379)
26 2iwa_A Glutamine cyclotransfer 97.2 0.073 2.5E-06 53.0 22.8 192 351-569 24-235 (266)
27 3jrp_A Fusion protein of prote 97.2 0.031 1.1E-06 56.3 20.5 188 357-570 22-239 (379)
28 1l0q_A Surface layer protein; 97.1 0.0072 2.5E-07 62.0 15.7 179 358-570 2-188 (391)
29 2qc5_A Streptogramin B lactona 97.0 0.26 9E-06 47.7 25.6 188 357-575 30-222 (300)
30 3q7m_A Lipoprotein YFGL, BAMB; 97.0 0.15 5.1E-06 52.2 24.2 174 352-552 48-246 (376)
31 3nol_A Glutamine cyclotransfer 97.0 0.028 9.7E-07 55.8 17.6 157 399-578 47-212 (262)
32 1l0q_A Surface layer protein; 97.0 0.017 6E-07 59.1 16.7 182 358-570 44-232 (391)
33 3q7m_A Lipoprotein YFGL, BAMB; 96.8 0.28 9.6E-06 50.1 24.4 188 350-576 96-304 (376)
34 1k8k_C P40, ARP2/3 complex 41 96.8 0.029 9.9E-07 56.6 16.5 146 357-522 19-172 (372)
35 1p22_A F-BOX/WD-repeat protein 96.8 0.06 2.1E-06 56.4 19.5 186 353-570 138-324 (435)
36 3fm0_A Protein CIAO1; WDR39,SG 96.8 0.045 1.5E-06 55.7 17.7 180 357-556 27-216 (345)
37 1vyh_C Platelet-activating fac 96.8 0.05 1.7E-06 56.9 18.4 145 357-527 119-269 (410)
38 3nok_A Glutaminyl cyclase; bet 96.7 0.052 1.8E-06 54.0 16.8 153 399-577 59-220 (268)
39 1q7f_A NHL, brain tumor CG1071 96.7 0.5 1.7E-05 45.9 25.7 189 357-570 40-237 (286)
40 1got_B GT-beta; complex (GTP-b 96.7 0.38 1.3E-05 48.5 23.9 183 357-570 66-256 (340)
41 4ery_A WD repeat-containing pr 96.7 0.13 4.4E-06 50.9 20.0 183 357-570 76-267 (312)
42 1q7f_A NHL, brain tumor CG1071 96.7 0.52 1.8E-05 45.7 24.6 186 357-569 88-278 (286)
43 2hqs_A Protein TOLB; TOLB, PAL 96.7 0.13 4.4E-06 54.0 20.8 198 357-578 189-395 (415)
44 2z2n_A Virginiamycin B lyase; 96.6 0.53 1.8E-05 45.4 26.1 188 357-575 25-217 (299)
45 3v7d_B Cell division control p 96.6 0.34 1.2E-05 50.7 23.8 184 355-568 277-462 (464)
46 4ery_A WD repeat-containing pr 96.6 0.12 4.1E-06 51.1 19.2 181 357-570 34-222 (312)
47 2ovr_B FBW7, F-BOX/WD repeat p 96.6 0.21 7.2E-06 52.2 21.8 183 354-570 165-347 (445)
48 2ovr_B FBW7, F-BOX/WD repeat p 96.6 0.1 3.5E-06 54.7 19.3 184 353-570 124-307 (445)
49 1p22_A F-BOX/WD-repeat protein 96.6 0.08 2.8E-06 55.4 18.3 186 353-570 178-364 (435)
50 1rwi_B Serine/threonine-protei 96.5 0.16 5.5E-06 48.8 19.1 183 357-570 34-221 (270)
51 1gxr_A ESG1, transducin-like e 96.5 0.095 3.2E-06 51.6 17.7 183 357-570 108-295 (337)
52 3f3f_A Nucleoporin SEH1; struc 96.5 0.29 1E-05 47.8 21.1 64 357-430 22-91 (351)
53 3bws_A Protein LP49; two-domai 96.5 0.12 4.1E-06 53.5 19.1 188 357-570 133-333 (433)
54 3vgz_A Uncharacterized protein 96.5 0.64 2.2E-05 46.1 23.9 183 358-570 101-302 (353)
55 2iwa_A Glutamine cyclotransfer 96.4 0.24 8.4E-06 49.2 19.7 151 398-570 24-180 (266)
56 3dwl_C Actin-related protein 2 96.4 0.011 3.9E-07 60.1 10.3 147 357-523 22-177 (377)
57 1got_B GT-beta; complex (GTP-b 96.4 0.2 6.7E-06 50.6 19.6 173 357-556 154-334 (340)
58 2z2n_A Virginiamycin B lyase; 96.4 0.75 2.6E-05 44.4 24.0 184 357-571 67-255 (299)
59 3jro_A Fusion protein of prote 96.3 0.074 2.5E-06 60.6 17.6 188 357-570 20-237 (753)
60 3ow8_A WD repeat-containing pr 96.3 0.17 5.7E-06 51.0 18.3 183 358-570 48-236 (321)
61 3ow8_A WD repeat-containing pr 96.3 0.18 6E-06 50.8 18.2 179 357-569 133-319 (321)
62 3odt_A Protein DOA1; ubiquitin 96.3 0.35 1.2E-05 47.0 19.9 192 354-578 110-304 (313)
63 2aq5_A Coronin-1A; WD40 repeat 96.3 0.25 8.7E-06 50.8 19.8 191 357-570 93-298 (402)
64 1gxr_A ESG1, transducin-like e 96.2 0.31 1.1E-05 47.8 19.6 183 357-570 62-254 (337)
65 3vl1_A 26S proteasome regulato 96.2 0.78 2.7E-05 46.9 23.2 184 357-570 108-321 (420)
66 3jro_A Fusion protein of prote 96.2 0.053 1.8E-06 61.8 15.2 198 358-581 67-297 (753)
67 1rwi_B Serine/threonine-protei 96.1 0.31 1.1E-05 46.7 18.4 183 357-570 77-263 (270)
68 4aez_A CDC20, WD repeat-contai 96.1 0.37 1.3E-05 49.6 20.0 185 356-570 101-292 (401)
69 3vgz_A Uncharacterized protein 96.1 1.3 4.3E-05 43.9 24.1 191 357-570 52-261 (353)
70 1ri6_A Putative isomerase YBHE 96.1 0.61 2.1E-05 45.9 20.7 163 405-588 141-328 (343)
71 3bws_A Protein LP49; two-domai 96.0 0.21 7.1E-06 51.7 17.8 190 357-569 223-430 (433)
72 3v7d_B Cell division control p 96.0 0.66 2.3E-05 48.4 21.9 143 402-570 277-420 (464)
73 3bg1_A Protein SEC13 homolog; 96.0 0.053 1.8E-06 54.4 12.7 200 358-585 71-309 (316)
74 1k8k_C P40, ARP2/3 complex 41 96.0 0.63 2.2E-05 46.5 20.9 196 357-580 63-286 (372)
75 3zwl_B Eukaryotic translation 96.0 0.17 5.9E-06 50.3 16.5 187 357-570 43-248 (369)
76 2qc5_A Streptogramin B lactona 96.0 1.3 4.3E-05 42.8 23.8 187 357-575 72-264 (300)
77 2pm7_B Protein transport prote 96.0 0.33 1.1E-05 47.8 18.1 196 358-579 67-295 (297)
78 2pbi_B Guanine nucleotide-bind 95.9 0.54 1.8E-05 47.8 20.1 184 357-570 75-270 (354)
79 2pbi_B Guanine nucleotide-bind 95.9 0.41 1.4E-05 48.7 18.9 173 357-555 165-347 (354)
80 2z3z_A Dipeptidyl aminopeptida 95.8 0.51 1.7E-05 52.6 20.7 188 372-570 234-434 (706)
81 2ojh_A Uncharacterized protein 95.8 1 3.5E-05 42.8 20.4 198 357-576 52-264 (297)
82 2hes_X YDR267CP; beta-propelle 95.8 0.4 1.4E-05 48.1 18.1 194 357-576 69-286 (330)
83 2hes_X YDR267CP; beta-propelle 95.8 0.2 7E-06 50.3 15.8 188 357-570 118-327 (330)
84 3ei3_B DNA damage-binding prot 95.7 0.26 8.8E-06 50.1 16.6 182 359-570 87-281 (383)
85 1qhu_A Protein (hemopexin); be 95.7 0.59 2E-05 50.1 19.5 172 357-570 158-384 (460)
86 3vl1_A 26S proteasome regulato 95.6 0.61 2.1E-05 47.7 19.3 185 357-570 150-364 (420)
87 2pm7_B Protein transport prote 95.6 0.31 1.1E-05 48.0 16.3 187 357-570 20-237 (297)
88 4aez_A CDC20, WD repeat-contai 95.6 0.32 1.1E-05 50.2 17.0 187 354-570 182-379 (401)
89 1r5m_A SIR4-interacting protei 95.6 0.1 3.6E-06 53.2 13.0 143 358-525 217-363 (425)
90 4gqb_B Methylosome protein 50; 95.6 0.66 2.3E-05 47.2 19.1 185 356-570 91-288 (344)
91 1r5m_A SIR4-interacting protei 95.5 0.42 1.4E-05 48.5 17.4 184 357-570 160-360 (425)
92 3mkq_A Coatomer beta'-subunit; 95.5 0.29 9.8E-06 55.3 17.5 182 357-570 66-258 (814)
93 2vdu_B TRNA (guanine-N(7)-)-me 95.5 1.1 3.9E-05 46.7 21.0 198 357-574 160-397 (450)
94 4gqb_B Methylosome protein 50; 95.5 0.45 1.6E-05 48.5 17.4 182 357-570 138-330 (344)
95 2hqs_A Protein TOLB; TOLB, PAL 95.4 0.65 2.2E-05 48.5 18.7 200 358-577 144-351 (415)
96 2ad6_A Methanol dehydrogenase 95.3 1.6 5.4E-05 48.0 22.2 121 351-482 56-193 (571)
97 3mkq_A Coatomer beta'-subunit; 95.3 0.27 9.1E-06 55.5 16.3 184 357-570 24-216 (814)
98 3c5m_A Oligogalacturonate lyas 95.3 0.29 1E-05 49.5 15.2 196 373-576 168-390 (396)
99 1pex_A Collagenase-3, MMP-13; 95.3 0.98 3.4E-05 43.0 17.7 145 351-527 27-196 (207)
100 3u4y_A Uncharacterized protein 95.3 0.65 2.2E-05 45.8 17.3 184 357-570 9-206 (331)
101 2ynn_A Coatomer subunit beta'; 95.2 0.84 2.9E-05 45.0 18.1 183 357-570 66-258 (304)
102 3hfq_A Uncharacterized protein 95.2 1.6 5.4E-05 43.5 20.3 144 373-529 18-178 (347)
103 4g56_B MGC81050 protein; prote 95.2 0.23 8E-06 50.7 14.2 182 357-570 150-342 (357)
104 2bkl_A Prolyl endopeptidase; m 95.1 1.3 4.4E-05 49.6 21.2 205 357-570 131-350 (695)
105 2dg1_A DRP35, lactonase; beta 95.1 0.78 2.7E-05 45.5 17.5 194 357-570 55-262 (333)
106 2ynn_A Coatomer subunit beta'; 95.1 0.65 2.2E-05 45.9 16.8 145 357-524 24-173 (304)
107 3zwl_B Eukaryotic translation 95.0 0.68 2.3E-05 45.9 16.7 194 357-570 85-303 (369)
108 3g4e_A Regucalcin; six bladed 95.0 1.4 4.8E-05 43.4 18.9 188 357-574 24-233 (297)
109 3pe7_A Oligogalacturonate lyas 95.0 3.3 0.00011 41.6 22.1 211 357-576 46-279 (388)
110 3fm0_A Protein CIAO1; WDR39,SG 95.0 0.71 2.4E-05 46.5 16.9 151 404-575 27-186 (345)
111 1vyh_C Platelet-activating fac 95.0 0.77 2.6E-05 47.7 17.5 180 357-570 161-368 (410)
112 3no2_A Uncharacterized protein 95.0 1.6 5.5E-05 42.9 19.0 185 357-576 4-203 (276)
113 3iz6_a 40S ribosomal protein R 94.9 2.9 9.8E-05 42.6 21.7 102 451-570 217-328 (380)
114 1sq9_A Antiviral protein SKI8; 94.9 1.2 4.3E-05 44.9 18.6 192 353-570 21-266 (397)
115 4g56_B MGC81050 protein; prote 94.9 0.32 1.1E-05 49.6 14.1 183 357-570 105-300 (357)
116 1erj_A Transcriptional repress 94.9 1.5 5E-05 45.1 19.2 144 357-524 134-288 (393)
117 1kb0_A Quinohemoprotein alcoho 94.8 5.4 0.00018 44.7 25.2 120 351-482 71-207 (677)
118 2xdw_A Prolyl endopeptidase; a 94.8 1.8 6.2E-05 48.5 21.3 205 357-570 135-367 (710)
119 3bg1_A Protein SEC13 homolog; 94.8 0.29 9.7E-06 48.9 13.1 111 357-482 24-143 (316)
120 4a2l_A BT_4663, two-component 94.8 3.7 0.00013 46.6 24.0 187 357-577 98-298 (795)
121 4aow_A Guanine nucleotide-bind 94.8 2.3 8E-05 41.5 19.8 185 358-570 51-245 (340)
122 3odt_A Protein DOA1; ubiquitin 94.7 1.6 5.4E-05 42.1 18.2 182 356-570 27-213 (313)
123 3azo_A Aminopeptidase; POP fam 94.6 1 3.5E-05 49.6 18.4 206 357-576 140-375 (662)
124 3c5m_A Oligogalacturonate lyas 94.6 2.6 9E-05 42.3 20.2 202 357-577 46-280 (396)
125 2vdu_B TRNA (guanine-N(7)-)-me 94.5 2.4 8.3E-05 44.2 20.2 149 357-527 113-275 (450)
126 4e54_B DNA damage-binding prot 94.5 0.18 6E-06 52.9 11.1 185 357-570 131-326 (435)
127 1qhu_A Protein (hemopexin); be 94.5 1.6 5.3E-05 46.8 18.5 171 357-570 107-330 (460)
128 3v9f_A Two-component system se 94.5 2.6 9E-05 47.7 21.7 184 357-576 417-617 (781)
129 4aow_A Guanine nucleotide-bind 94.5 1.3 4.5E-05 43.4 17.1 185 357-570 97-285 (340)
130 1jmx_B Amine dehydrogenase; ox 94.4 0.95 3.2E-05 44.7 15.9 154 357-528 10-180 (349)
131 2xdw_A Prolyl endopeptidase; a 94.4 5.9 0.0002 44.2 24.1 194 372-578 207-424 (710)
132 3v9f_A Two-component system se 94.4 0.87 3E-05 51.8 17.4 177 357-570 460-655 (781)
133 4gga_A P55CDC, cell division c 94.3 1.6 5.5E-05 45.1 18.1 135 373-524 125-262 (420)
134 1sq9_A Antiviral protein SKI8; 94.3 0.9 3.1E-05 45.9 15.8 188 359-570 82-321 (397)
135 2aq5_A Coronin-1A; WD40 repeat 94.3 2.4 8.4E-05 43.2 19.2 180 373-570 57-253 (402)
136 3mmy_A MRNA export factor; mRN 94.3 2.4 8.3E-05 41.7 18.7 148 358-530 54-208 (368)
137 3u4y_A Uncharacterized protein 94.3 1.4 4.9E-05 43.3 16.8 190 357-573 50-255 (331)
138 2z3z_A Dipeptidyl aminopeptida 94.2 2.6 9E-05 46.6 20.7 151 419-576 234-397 (706)
139 1itv_A MMP9; adaptive molecula 94.2 1.7 5.7E-05 41.0 16.1 143 351-525 10-176 (195)
140 1yiq_A Quinohemoprotein alcoho 94.2 8 0.00027 43.4 24.7 120 351-482 64-200 (689)
141 1pjx_A Dfpase, DIISOPROPYLFLUO 94.2 1.6 5.5E-05 42.5 16.9 185 358-570 83-298 (314)
142 1kv9_A Type II quinohemoprotei 94.1 8.6 0.00029 42.9 24.7 120 351-482 60-195 (668)
143 1ri6_A Putative isomerase YBHE 94.1 4.6 0.00016 39.3 20.8 198 357-579 48-273 (343)
144 2ojh_A Uncharacterized protein 94.1 2.2 7.6E-05 40.3 17.4 184 372-576 21-212 (297)
145 3k26_A Polycomb protein EED; W 94.1 2.4 8.2E-05 41.8 18.2 104 358-478 85-194 (366)
146 4a11_B DNA excision repair pro 94.0 0.41 1.4E-05 48.4 12.5 186 357-570 55-275 (408)
147 2ecf_A Dipeptidyl peptidase IV 94.0 0.72 2.5E-05 51.6 15.6 113 357-484 47-189 (741)
148 4a2l_A BT_4663, two-component 94.0 1.6 5.5E-05 49.6 18.7 167 357-555 462-650 (795)
149 1npe_A Nidogen, entactin; glyc 94.0 4.6 0.00016 38.8 24.6 190 351-570 39-237 (267)
150 2bkl_A Prolyl endopeptidase; m 94.0 2.7 9.3E-05 46.9 20.2 210 357-577 178-404 (695)
151 1pjx_A Dfpase, DIISOPROPYLFLUO 94.0 2 6.7E-05 41.9 17.0 192 357-570 28-255 (314)
152 2p5d_A UPF0310 protein mjecl36 93.9 0.048 1.6E-06 49.4 4.4 95 22-118 8-113 (147)
153 3scy_A Hypothetical bacterial 93.9 1.4 4.9E-05 44.2 16.2 112 359-476 14-129 (361)
154 3dwl_C Actin-related protein 2 93.9 0.12 4.1E-06 52.4 8.0 145 404-569 22-175 (377)
155 1pgu_A Actin interacting prote 93.8 1.4 4.7E-05 47.4 17.0 188 357-570 77-282 (615)
156 1nir_A Nitrite reductase; hemo 93.8 1.5 5.3E-05 47.7 17.3 188 373-581 200-418 (543)
157 3i2n_A WD repeat-containing pr 93.8 1.7 5.8E-05 42.8 16.4 145 357-523 128-291 (357)
158 3hfq_A Uncharacterized protein 93.7 3.2 0.00011 41.2 18.4 199 357-580 50-282 (347)
159 3e5z_A Putative gluconolactona 93.6 5.7 0.00019 38.5 19.6 183 358-570 40-245 (296)
160 4a11_B DNA excision repair pro 93.5 0.78 2.7E-05 46.2 13.5 104 357-477 111-219 (408)
161 1w6s_A Methanol dehydrogenase 93.5 5.5 0.00019 44.1 21.2 121 351-482 56-199 (599)
162 3i2n_A WD repeat-containing pr 93.5 2.5 8.5E-05 41.6 16.9 183 359-569 32-241 (357)
163 1erj_A Transcriptional repress 93.5 1.9 6.4E-05 44.3 16.5 143 404-570 134-286 (393)
164 3lrv_A PRE-mRNA-splicing facto 93.4 3.2 0.00011 41.4 17.8 185 356-570 46-243 (343)
165 2ghs_A AGR_C_1268P; regucalcin 93.4 4.9 0.00017 40.1 19.2 142 357-522 60-209 (326)
166 1pgu_A Actin interacting prote 93.4 2.8 9.5E-05 45.0 18.4 186 357-570 127-327 (615)
167 1yfq_A Cell cycle arrest prote 93.3 1.9 6.4E-05 42.4 15.7 175 357-555 22-215 (342)
168 2p4o_A Hypothetical protein; p 93.3 6.9 0.00024 38.5 22.8 197 350-576 34-247 (306)
169 3k26_A Polycomb protein EED; W 93.2 4.7 0.00016 39.6 18.5 65 357-431 127-194 (366)
170 3mmy_A MRNA export factor; mRN 93.2 4 0.00014 40.1 18.0 143 357-524 97-248 (368)
171 2fp8_A Strictosidine synthase; 93.2 5.1 0.00017 39.7 18.8 197 351-570 83-312 (322)
172 3iz6_a 40S ribosomal protein R 93.2 3 0.0001 42.4 17.5 184 359-570 171-374 (380)
173 3no2_A Uncharacterized protein 93.1 6.9 0.00024 38.2 21.1 199 356-582 46-266 (276)
174 2ecf_A Dipeptidyl peptidase IV 93.1 1.2 4E-05 49.8 15.4 202 357-576 119-374 (741)
175 2gop_A Trilobed protease; beta 93.0 2.1 7.2E-05 42.4 15.7 190 357-568 69-290 (347)
176 3iuj_A Prolyl endopeptidase; h 93.0 9.4 0.00032 42.6 22.6 203 357-571 139-359 (693)
177 4gga_A P55CDC, cell division c 93.0 4.4 0.00015 41.7 18.6 186 357-570 158-352 (420)
178 2hd9_A UPF0310 protein PH1033; 92.8 0.23 8E-06 44.7 7.2 113 29-144 12-142 (145)
179 1yr2_A Prolyl oligopeptidase; 92.8 6.8 0.00023 44.0 21.2 203 357-570 173-394 (741)
180 1nir_A Nitrite reductase; hemo 92.8 1.5 5.2E-05 47.7 15.3 183 357-570 148-354 (543)
181 3azo_A Aminopeptidase; POP fam 92.8 1.9 6.4E-05 47.4 16.2 206 358-577 90-332 (662)
182 1pex_A Collagenase-3, MMP-13; 92.8 6.5 0.00022 37.2 17.8 139 399-570 28-191 (207)
183 3dm0_A Maltose-binding peripla 92.8 2.9 0.0001 46.4 17.9 182 357-570 441-631 (694)
184 2pm9_A Protein WEB1, protein t 92.7 1.7 5.9E-05 44.0 14.8 187 358-570 126-336 (416)
185 2pm9_A Protein WEB1, protein t 92.7 1.4 4.9E-05 44.7 14.1 188 357-570 78-293 (416)
186 3g4e_A Regucalcin; six bladed 92.7 2.8 9.6E-05 41.1 15.9 176 357-555 64-263 (297)
187 2xzm_R RACK1; ribosome, transl 92.6 7.6 0.00026 38.6 19.3 105 357-478 38-151 (343)
188 3sfz_A APAF-1, apoptotic pepti 92.6 0.84 2.9E-05 54.4 13.8 184 357-570 972-1157(1249)
189 1yfq_A Cell cycle arrest prote 92.5 5 0.00017 39.2 17.5 186 357-570 67-281 (342)
190 2dg1_A DRP35, lactonase; beta 92.5 1.3 4.3E-05 43.9 13.1 152 404-570 55-212 (333)
191 3gre_A Serine/threonine-protei 92.4 11 0.00036 38.6 21.5 149 357-525 181-361 (437)
192 1kb0_A Quinohemoprotein alcoho 92.4 5.2 0.00018 44.8 19.4 118 400-529 73-207 (677)
193 3oyo_A Hemopexin fold protein 92.3 0.88 3E-05 43.9 11.1 139 356-522 12-197 (225)
194 3c7x_A Matrix metalloproteinas 92.2 3.9 0.00013 38.4 15.3 144 352-525 10-177 (196)
195 2gop_A Trilobed protease; beta 92.1 3.1 0.00011 41.1 15.5 185 371-576 41-257 (347)
196 3frx_A Guanine nucleotide-bind 92.0 4.1 0.00014 40.3 16.2 141 404-570 76-226 (319)
197 3ei3_B DNA damage-binding prot 91.8 2.8 9.7E-05 42.2 15.0 142 406-570 87-235 (383)
198 3lrv_A PRE-mRNA-splicing facto 91.8 8 0.00028 38.3 18.2 152 357-528 138-299 (343)
199 3fvz_A Peptidyl-glycine alpha- 91.6 11 0.00039 37.2 25.4 194 357-570 101-321 (329)
200 3pe7_A Oligogalacturonate lyas 91.5 3.5 0.00012 41.5 15.3 194 373-573 168-387 (388)
201 2xbg_A YCF48-like protein; pho 91.4 8.3 0.00028 38.6 17.8 181 356-569 131-320 (327)
202 3dm0_A Maltose-binding peripla 91.3 10 0.00034 42.0 20.1 184 358-570 395-591 (694)
203 3b7f_A Glycosyl hydrolase, BNR 91.3 14 0.00049 37.7 21.9 182 375-578 33-270 (394)
204 1kv9_A Type II quinohemoprotei 91.3 8 0.00027 43.2 19.2 117 400-528 62-194 (668)
205 1yr2_A Prolyl oligopeptidase; 91.2 22 0.00076 39.7 23.4 194 372-578 242-449 (741)
206 3sfz_A APAF-1, apoptotic pepti 91.1 4.1 0.00014 48.4 17.6 105 357-480 626-736 (1249)
207 2p4o_A Hypothetical protein; p 91.1 12 0.00042 36.6 20.2 175 357-553 82-277 (306)
208 3fvz_A Peptidyl-glycine alpha- 91.0 13 0.00045 36.8 28.5 187 373-573 69-280 (329)
209 3frx_A Guanine nucleotide-bind 90.8 6.6 0.00023 38.7 16.3 143 357-525 76-229 (319)
210 1yiq_A Quinohemoprotein alcoho 90.7 9.6 0.00033 42.7 19.1 118 400-529 66-200 (689)
211 3ott_A Two-component system se 90.6 16 0.00055 41.0 21.1 144 357-530 73-227 (758)
212 2ad6_A Methanol dehydrogenase 90.4 6.8 0.00023 42.9 17.3 119 400-529 58-193 (571)
213 4e54_B DNA damage-binding prot 90.3 0.9 3.1E-05 47.4 9.7 143 404-570 131-281 (435)
214 3b7f_A Glycosyl hydrolase, BNR 90.3 17 0.0006 37.0 19.7 199 357-581 128-384 (394)
215 1pby_B Quinohemoprotein amine 90.3 1.2 4.1E-05 43.5 10.1 170 373-570 115-309 (337)
216 1qks_A Cytochrome CD1 nitrite 90.2 4.4 0.00015 44.5 15.5 184 357-570 166-372 (567)
217 1gen_A Gelatinase A; hydrolase 90.2 9 0.00031 36.5 15.8 147 350-525 33-204 (218)
218 1flg_A Protein (quinoprotein e 89.7 27 0.00092 38.2 24.1 119 351-481 62-200 (582)
219 3e5z_A Putative gluconolactona 89.7 12 0.0004 36.1 16.8 181 357-570 79-285 (296)
220 1jmx_B Amine dehydrogenase; ox 89.6 1 3.4E-05 44.5 8.9 148 404-570 10-174 (349)
221 3scy_A Hypothetical bacterial 89.6 17 0.00059 36.0 23.1 204 357-580 60-303 (361)
222 2xyi_A Probable histone-bindin 89.6 1.6 5.4E-05 45.5 10.8 105 404-523 192-309 (430)
223 3ott_A Two-component system se 89.4 6.3 0.00022 44.4 16.5 130 404-556 482-618 (758)
224 1qks_A Cytochrome CD1 nitrite 89.3 16 0.00056 39.9 19.1 198 357-581 208-437 (567)
225 3ba0_A Macrophage metalloelast 89.2 14 0.00048 38.1 17.5 148 351-528 184-355 (365)
226 3gre_A Serine/threonine-protei 89.2 16 0.00056 37.2 18.3 146 404-570 181-358 (437)
227 1itv_A MMP9; adaptive molecula 89.1 15 0.0005 34.4 16.9 141 399-570 11-173 (195)
228 4h5i_A Guanine nucleotide-exch 89.0 21 0.00071 36.0 21.4 188 357-569 144-341 (365)
229 1su3_A Interstitial collagenas 88.9 8.2 0.00028 41.1 15.8 147 350-528 265-437 (450)
230 3iuj_A Prolyl endopeptidase; h 88.8 33 0.0011 38.1 21.7 161 404-578 244-413 (693)
231 3dr2_A Exported gluconolactona 88.8 18 0.00061 35.2 17.6 188 357-570 56-266 (305)
232 1pby_B Quinohemoprotein amine 88.8 6.2 0.00021 38.3 14.0 149 359-527 2-167 (337)
233 3o4h_A Acylamino-acid-releasin 88.5 4 0.00014 44.1 13.5 187 357-571 121-315 (582)
234 1nr0_A Actin interacting prote 88.4 22 0.00075 38.7 19.5 182 360-570 162-354 (611)
235 2xbg_A YCF48-like protein; pho 88.1 22 0.00077 35.3 23.4 195 351-578 83-287 (327)
236 1nr0_A Actin interacting prote 88.1 29 0.00099 37.7 20.2 151 357-529 201-361 (611)
237 2xzm_R RACK1; ribosome, transl 88.0 21 0.00071 35.3 17.6 141 357-522 87-243 (343)
238 4ggc_A P55CDC, cell division c 88.0 19 0.00065 34.4 19.1 135 373-524 45-182 (318)
239 2hz6_A Endoplasmic reticulum t 87.1 0.29 9.9E-06 50.6 3.0 140 356-528 8-156 (369)
240 3o4h_A Acylamino-acid-releasin 87.0 12 0.0004 40.3 16.1 199 354-575 29-232 (582)
241 2xyi_A Probable histone-bindin 87.0 4.4 0.00015 42.0 12.2 141 360-523 196-353 (430)
242 3oyo_A Hemopexin fold protein 86.4 22 0.00076 33.9 15.9 139 403-570 12-197 (225)
243 2ghs_A AGR_C_1268P; regucalcin 86.4 22 0.00076 35.1 16.7 110 404-529 60-174 (326)
244 1w6s_A Methanol dehydrogenase 86.2 11 0.00037 41.7 15.3 120 399-529 57-199 (599)
245 3vu4_A KMHSV2; beta-propeller 85.9 30 0.001 34.5 19.2 62 498-570 206-270 (355)
246 1hxn_A Hemopexin, HPX; heme, b 85.6 9.7 0.00033 36.4 12.7 135 356-522 27-196 (219)
247 3hrp_A Uncharacterized protein 85.5 36 0.0012 35.1 20.4 192 357-576 141-360 (409)
248 3lp9_A LS-24; SEED albumin, pl 85.0 1.8 6.3E-05 41.7 7.3 140 357-524 15-202 (227)
249 3hxj_A Pyrrolo-quinoline quino 84.5 19 0.00063 34.9 14.9 176 355-575 105-290 (330)
250 3f3f_A Nucleoporin SEH1; struc 84.4 29 0.00099 33.1 17.3 64 404-477 22-91 (351)
251 4ggc_A P55CDC, cell division c 84.3 29 0.00099 33.0 17.8 186 357-570 78-272 (318)
252 1su3_A Interstitial collagenas 83.8 12 0.0004 39.9 13.6 141 399-570 267-431 (450)
253 1k32_A Tricorn protease; prote 83.0 31 0.001 40.3 18.2 195 356-576 254-467 (1045)
254 1xfd_A DIP, dipeptidyl aminope 82.7 17 0.00058 40.0 15.2 166 357-529 71-295 (723)
255 2ymu_A WD-40 repeat protein; u 82.3 28 0.00097 36.7 16.3 176 357-568 396-577 (577)
256 1xfd_A DIP, dipeptidyl aminope 82.0 16 0.00056 40.1 14.7 104 374-483 38-150 (723)
257 3v65_B Low-density lipoprotein 81.9 48 0.0017 33.8 21.6 177 357-568 127-315 (386)
258 4h5i_A Guanine nucleotide-exch 81.5 46 0.0016 33.3 17.3 147 357-522 187-342 (365)
259 1gen_A Gelatinase A; hydrolase 81.4 37 0.0013 32.1 17.1 141 399-570 35-201 (218)
260 1flg_A Protein (quinoprotein e 81.2 35 0.0012 37.2 16.8 116 400-528 64-200 (582)
261 1k32_A Tricorn protease; prote 81.2 11 0.00039 44.0 13.5 155 357-530 307-468 (1045)
262 3ju4_A Endo-N-acetylneuraminid 80.9 58 0.002 34.0 19.6 190 381-570 268-513 (670)
263 3hxj_A Pyrrolo-quinoline quino 80.9 11 0.00038 36.6 11.5 172 357-575 70-250 (330)
264 1hxn_A Hemopexin, HPX; heme, b 80.6 40 0.0014 32.0 15.7 136 403-570 27-196 (219)
265 3ba0_A Macrophage metalloelast 80.3 56 0.0019 33.5 17.3 141 399-570 185-349 (365)
266 3dr2_A Exported gluconolactona 80.3 22 0.00074 34.6 13.5 157 357-530 96-274 (305)
267 3c75_H MADH, methylamine dehyd 80.2 33 0.0011 36.0 15.5 117 357-480 84-213 (426)
268 2xe4_A Oligopeptidase B; hydro 77.6 59 0.002 36.5 17.6 200 357-569 185-398 (751)
269 3c7x_A Matrix metalloproteinas 77.5 28 0.00095 32.4 12.5 102 356-478 60-177 (196)
270 2ymu_A WD-40 repeat protein; u 77.5 75 0.0026 33.4 18.2 179 357-570 355-538 (577)
271 2ece_A 462AA long hypothetical 77.4 78 0.0027 33.6 19.9 210 357-582 95-365 (462)
272 2oaj_A Protein SNI1; WD40 repe 77.4 1.1E+02 0.0037 35.2 20.2 182 357-570 28-241 (902)
273 3vu4_A KMHSV2; beta-propeller 77.4 60 0.002 32.2 22.3 64 451-524 206-272 (355)
274 3v64_C Agrin; beta propeller, 77.1 64 0.0022 32.4 22.3 169 357-554 84-264 (349)
275 2mad_H Methylamine dehydrogena 77.0 67 0.0023 32.6 21.9 78 498-583 278-362 (373)
276 2mad_H Methylamine dehydrogena 76.9 67 0.0023 32.6 23.4 100 374-480 48-160 (373)
277 3hrp_A Uncharacterized protein 75.5 59 0.002 33.5 15.7 147 404-574 141-301 (409)
278 3dw8_B Serine/threonine-protei 75.5 37 0.0013 34.3 14.1 64 451-525 188-260 (447)
279 3lp9_A LS-24; SEED albumin, pl 73.9 5.5 0.00019 38.3 6.6 101 356-477 71-202 (227)
280 3v65_B Low-density lipoprotein 72.5 87 0.003 31.8 19.8 169 373-570 96-276 (386)
281 2p9w_A MAL S 1 allergenic prot 72.0 48 0.0017 33.6 13.4 184 357-556 76-306 (334)
282 1ijq_A LDL receptor, low-densi 71.8 79 0.0027 31.0 24.8 187 351-569 33-236 (316)
283 2cn3_A Xyloglucanase, beta-1,4 71.8 1E+02 0.0036 34.4 17.7 171 375-577 504-694 (737)
284 1n7d_A LDL receptor, low-densi 71.2 34 0.0012 38.3 13.4 180 357-570 417-613 (699)
285 3c75_H MADH, methylamine dehyd 70.7 43 0.0015 35.1 13.2 77 498-583 330-414 (426)
286 1kd8_B GABH BLL, GCN4 acid bas 67.0 11 0.00037 24.9 4.6 33 264-296 2-34 (36)
287 2fp8_A Strictosidine synthase; 65.5 1E+02 0.0035 29.9 15.3 134 373-523 165-313 (322)
288 1ijq_A LDL receptor, low-densi 65.0 1.1E+02 0.0037 30.0 19.6 169 373-570 10-194 (316)
289 2oiz_A Aromatic amine dehydrog 64.0 1.2E+02 0.0041 30.2 19.0 73 498-582 265-347 (361)
290 2hz6_A Endoplasmic reticulum t 62.7 2 6.9E-05 44.1 0.8 140 402-575 7-156 (369)
291 2l5g_B Putative uncharacterize 62.3 17 0.00057 25.1 5.0 34 258-291 4-37 (42)
292 1npe_A Nidogen, entactin; glyc 61.9 1E+02 0.0036 28.8 22.9 149 357-528 90-243 (267)
293 3dw8_B Serine/threonine-protei 60.2 1.4E+02 0.0048 29.7 15.0 151 357-529 188-379 (447)
294 1kd8_A GABH AIV, GCN4 acid bas 59.8 22 0.00075 23.5 5.0 32 265-296 3-34 (36)
295 3tc9_A Hypothetical hydrolase; 58.6 84 0.0029 32.6 12.7 144 357-522 149-300 (430)
296 2xe4_A Oligopeptidase B; hydro 57.0 2.4E+02 0.0082 31.4 19.3 98 419-521 294-398 (751)
297 1ck7_A Protein (gelatinase A); 56.7 35 0.0012 37.8 9.5 146 350-524 446-616 (631)
298 3ei3_A DNA damage-binding prot 56.3 3E+02 0.01 32.7 18.2 168 372-554 806-987 (1158)
299 3v64_C Agrin; beta propeller, 56.2 1.6E+02 0.0056 29.2 21.3 171 373-570 53-233 (349)
300 2wq1_A General control protein 54.4 23 0.00079 23.0 4.3 29 265-293 2-30 (33)
301 3tc9_A Hypothetical hydrolase; 52.4 76 0.0026 32.9 11.0 142 404-570 149-300 (430)
302 3m0c_C LDL receptor, low-densi 51.2 3.1E+02 0.011 31.0 22.6 175 373-576 404-596 (791)
303 3m0c_C LDL receptor, low-densi 50.4 3.2E+02 0.011 30.9 26.0 172 357-554 435-621 (791)
304 2hy6_A General control protein 49.8 22 0.00075 23.2 3.7 30 264-293 2-31 (34)
305 3p5b_L Low density lipoprotein 48.1 2.4E+02 0.0081 28.7 24.6 172 357-553 123-308 (400)
306 2r2v_A GCN4 leucine zipper; co 47.5 27 0.00093 22.8 3.9 30 264-293 2-31 (34)
307 3c3f_A Alpha/beta peptide with 47.0 28 0.00097 22.6 3.9 29 265-293 3-31 (34)
308 1uo4_A General control protein 46.3 32 0.0011 22.5 4.1 29 265-293 3-31 (34)
309 2oiz_A Aromatic amine dehydrog 46.2 2.3E+02 0.0079 28.0 17.8 71 451-531 265-342 (361)
310 3c3g_A Alpha/beta peptide with 45.9 38 0.0013 22.0 4.3 29 265-293 2-30 (33)
311 2ar1_A Hypothetical protein; s 45.0 29 0.001 31.7 5.4 40 47-88 54-95 (172)
312 2oxj_A Hybrid alpha/beta pepti 43.8 34 0.0012 22.3 3.9 28 265-292 3-30 (34)
313 3p5b_L Low density lipoprotein 43.3 2.8E+02 0.0095 28.1 22.1 173 373-576 92-284 (400)
314 4hvt_A Ritya.17583.B, post-pro 41.8 3.8E+02 0.013 29.8 15.3 167 360-535 256-441 (711)
315 2jee_A YIIU; FTSZ, septum, coi 41.7 78 0.0027 25.1 6.7 47 260-306 17-63 (81)
316 3m48_A General control protein 41.6 29 0.001 22.6 3.4 28 266-293 3-30 (33)
317 4a5s_A Dipeptidyl peptidase 4 41.2 2.5E+02 0.0086 30.9 13.8 65 373-437 36-109 (740)
318 3qhy_B Beta-lactamase inhibito 40.8 38 0.0013 33.1 6.1 97 443-556 150-247 (282)
319 1n7d_A LDL receptor, low-densi 40.7 1.9E+02 0.0065 32.1 12.6 147 357-528 464-619 (699)
320 3sov_A LRP-6, low-density lipo 40.0 2.8E+02 0.0095 27.2 20.3 178 357-569 46-236 (318)
321 1lwu_C Fibrinogen gamma chain; 40.0 27 0.00094 35.3 4.9 47 261-307 3-49 (323)
322 1z68_A Fibroblast activation p 39.5 2.8E+02 0.0094 30.1 13.6 163 357-526 263-446 (719)
323 2qe8_A Uncharacterized protein 39.4 2.8E+02 0.0095 27.0 13.2 121 451-577 27-162 (343)
324 1sqj_A OXG-RCBH, oligoxylogluc 37.9 4.7E+02 0.016 29.3 25.3 196 374-580 38-279 (789)
325 2bni_A General control protein 37.7 36 0.0012 22.2 3.3 29 265-293 3-31 (34)
326 3k6s_A Integrin alpha-X; cell 37.2 1.8E+02 0.006 34.5 11.9 177 347-526 333-545 (1095)
327 1ck7_A Protein (gelatinase A); 36.5 1.2E+02 0.004 33.6 9.6 141 399-570 448-614 (631)
328 1z68_A Fibroblast activation p 36.1 4.4E+02 0.015 28.4 16.7 153 373-530 224-402 (719)
329 1sqj_A OXG-RCBH, oligoxylogluc 35.7 5.1E+02 0.017 29.0 26.8 217 350-577 66-340 (789)
330 2oit_A Nucleoporin 214KDA; NH2 34.6 3.9E+02 0.013 27.2 20.5 115 405-531 162-292 (434)
331 4hw6_A Hypothetical protein, I 34.3 4E+02 0.014 27.3 14.0 142 358-522 153-303 (433)
332 3sjl_D Methylamine dehydrogena 33.5 1.1E+02 0.0039 31.4 8.5 71 404-481 291-368 (386)
333 3a0f_A Xyloglucanase; beta-pro 33.2 5.5E+02 0.019 28.6 25.2 197 374-581 44-295 (763)
334 1lwu_A Fibrinogen alpha-1 chai 31.8 76 0.0026 26.8 5.4 51 255-305 14-64 (119)
335 3t97_C Nuclear pore glycoprote 31.7 1E+02 0.0034 23.3 5.6 48 261-308 10-57 (64)
336 2cn3_A Xyloglucanase, beta-1,4 31.5 5.7E+02 0.019 28.3 25.2 209 358-581 36-294 (737)
337 2j04_A TAU60, YPL007P, hypothe 30.8 5.5E+02 0.019 27.9 20.8 172 357-554 96-287 (588)
338 3nmd_A CGMP dependent protein 30.2 1.3E+02 0.0044 23.3 6.1 30 281-310 37-66 (72)
339 2qe8_A Uncharacterized protein 30.0 3.9E+02 0.013 25.9 14.3 120 357-482 27-161 (343)
340 3sjl_D Methylamine dehydrogena 30.0 4.6E+02 0.016 26.7 14.3 73 357-433 89-173 (386)
341 2eve_A Hypothetical protein ps 28.9 49 0.0017 29.7 4.0 40 47-88 36-77 (157)
342 1fwx_A Nitrous oxide reductase 28.9 5.5E+02 0.019 28.0 13.3 189 357-555 101-351 (595)
343 3efg_A Protein SLYX homolog; x 28.5 1.8E+02 0.0063 22.7 7.0 54 258-311 9-62 (78)
344 2oit_A Nucleoporin 214KDA; NH2 28.2 4.9E+02 0.017 26.4 15.3 115 358-484 162-292 (434)
345 4hw6_A Hypothetical protein, I 28.0 4.8E+02 0.017 26.7 12.5 141 405-570 153-303 (433)
346 4d9s_A UVB-resistance protein 27.9 1.5E+02 0.0052 30.2 8.4 17 490-506 286-303 (406)
347 4a5s_A Dipeptidyl peptidase 4 26.7 5.6E+02 0.019 27.9 13.5 72 357-435 72-147 (740)
348 3a0f_A Xyloglucanase; beta-pro 26.5 7E+02 0.024 27.7 22.5 205 358-576 88-351 (763)
349 4dzn_A Coiled-coil peptide CC- 25.9 1.3E+02 0.0043 18.8 4.4 25 265-289 4-28 (33)
350 3qhy_B Beta-lactamase inhibito 25.7 78 0.0027 30.9 5.4 56 397-460 151-206 (282)
351 3k6s_A Integrin alpha-X; cell 25.1 3.4E+02 0.012 32.0 11.6 174 397-574 336-546 (1095)
352 1jof_A Carboxy-CIS,CIS-muconat 24.5 4.9E+02 0.017 25.2 20.5 104 420-528 167-297 (365)
353 3hx6_A Type 4 fimbrial biogene 24.1 7.1E+02 0.024 26.9 14.9 70 454-525 153-234 (570)
354 4a0p_A LRP6, LRP-6, low-densit 23.9 7.2E+02 0.025 26.9 22.8 175 349-553 38-225 (628)
355 2l5g_B Putative uncharacterize 23.9 1.7E+02 0.0059 20.1 5.0 30 267-296 6-35 (42)
356 3ghg_A Fibrinogen alpha chain; 23.4 25 0.00084 37.6 1.2 103 200-308 56-162 (562)
357 3hnw_A Uncharacterized protein 23.3 1.1E+02 0.0038 26.7 5.3 48 259-306 78-125 (138)
358 1fwx_A Nitrous oxide reductase 22.9 4.2E+02 0.014 28.9 11.0 166 394-570 85-307 (595)
359 1deq_A Fibrinogen (alpha chain 22.6 1.3E+02 0.0044 30.8 6.2 50 258-307 108-157 (390)
360 1deq_A Fibrinogen (alpha chain 22.1 44 0.0015 34.2 2.7 64 246-309 101-166 (390)
361 3ra3_A P1C; coiled coil domain 21.9 74 0.0025 19.1 2.5 21 268-288 5-25 (28)
362 2oaj_A Protein SNI1; WD40 repe 21.7 9E+02 0.031 27.3 22.9 148 357-528 68-247 (902)
363 2oqq_A Transcription factor HY 21.4 2E+02 0.007 19.7 5.9 28 265-292 5-32 (42)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.2e-43 Score=366.06 Aligned_cols=259 Identities=32% Similarity=0.602 Sum_probs=238.2
Q ss_pred ccccCCCcccc---CCCccCcceEEEEECCEEEEEeeC----CCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEEC
Q 007704 332 LHLDPSESIYL---PMSSARSYASAAMLNGELYIFGGG----DGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATID 404 (592)
Q Consensus 332 ~~~~p~~~~~~---p~p~~R~~~s~v~~~~~Iyv~GG~----~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~ 404 (592)
+.+++....|. ++|.+|.+|++++++++|||+||. ++....+++++||+.+++|+.++++|.+|..|++++++
T Consensus 42 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~ 121 (308)
T 1zgk_A 42 EAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVID 121 (308)
T ss_dssp EEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEET
T ss_pred EEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEEC
Confidence 44555554443 678899999999999999999998 56667899999999999999999999999999999999
Q ss_pred CEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEecc
Q 007704 405 NKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIAN 484 (592)
Q Consensus 405 ~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~ 484 (592)
++|||+||.+.....+++++||+.+++|+.++++|.+|..|++++++++||++||.++...++++++||+.+++|+.+++
T Consensus 122 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 201 (308)
T 1zgk_A 122 GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITA 201 (308)
T ss_dssp TEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCC
T ss_pred CEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCC
Confidence 99999999877777899999999999999999999999999999999999999999888778999999999999999999
Q ss_pred CCCCCceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEE
Q 007704 485 MNRRRGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTV 564 (592)
Q Consensus 485 ~p~~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v 564 (592)
+|.+|..|++++++++||++||.++....+++++||+.+++|+.+.++|.+|..+++++++++|||+||.++. ...+++
T Consensus 202 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~-~~~~~v 280 (308)
T 1zgk_A 202 MNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGH-TFLDSV 280 (308)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSS-CBCCEE
T ss_pred CCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEECCEEEEEcCcCCC-cccceE
Confidence 9999999999999999999999987777899999999999999999999999999999999999999998653 578999
Q ss_pred EEEcCC-CcEEEccccCCCCccceEEEEC
Q 007704 565 ERFKEG-QGWEEINSRAIGKRCFMSVVTV 592 (592)
Q Consensus 565 ~~Yd~~-~~W~~v~~~p~~~r~~~savvl 592 (592)
++||++ ++|+.++.+|.+ |+.++|++|
T Consensus 281 ~~yd~~~~~W~~~~~~p~~-r~~~~~~~l 308 (308)
T 1zgk_A 281 ECYDPDTDTWSEVTRMTSG-RSGVGVAVT 308 (308)
T ss_dssp EEEETTTTEEEEEEECSSC-CBSCEEEEC
T ss_pred EEEcCCCCEEeecCCCCCC-cccceeEeC
Confidence 999999 999999999988 777777765
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.5e-43 Score=361.91 Aligned_cols=258 Identities=30% Similarity=0.582 Sum_probs=234.6
Q ss_pred cccCCCcccc---CCCccCcceEEEEECCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEE
Q 007704 333 HLDPSESIYL---PMSSARSYASAAMLNGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFA 409 (592)
Q Consensus 333 ~~~p~~~~~~---p~p~~R~~~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv 409 (592)
.+++....|. ++|.+|.+|+++.++++|||+||.++....+++++||+.+++|+.++++|.+|..|++++++++|||
T Consensus 34 ~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv 113 (302)
T 2xn4_A 34 CYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYA 113 (302)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEE
T ss_pred EEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEE
Confidence 3444444443 6788999999999999999999998877889999999999999999999999999999999999999
Q ss_pred EecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEECCEEEEEeccCCCC--CCCeeEEEeCCCCeEEEeccCCC
Q 007704 410 IGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAELNGVLYATGGYDGNE--YMNSAERFDPREHYWTKIANMNR 487 (592)
Q Consensus 410 ~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~--~~~~v~~yD~~t~~W~~i~~~p~ 487 (592)
+||.++...++++++||+.+++|+.++++|.+|..|++++++++||++||.+... .++++++||+.+++|+.++++|.
T Consensus 114 ~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~ 193 (302)
T 2xn4_A 114 VGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMST 193 (302)
T ss_dssp EEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSS
T ss_pred EcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcc
Confidence 9998877788999999999999999999999999999999999999999987653 57899999999999999999999
Q ss_pred CCceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEEEEE
Q 007704 488 RRGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERF 567 (592)
Q Consensus 488 ~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Y 567 (592)
+|..|++++++++||++||.++....+++++||+.+++|+.++++|.+|..|++++++++|||+||.++. ...+++++|
T Consensus 194 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~-~~~~~v~~y 272 (302)
T 2xn4_A 194 RRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGS-CNLASVEYY 272 (302)
T ss_dssp CCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSS-SBCCCEEEE
T ss_pred ccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCCC-cccccEEEE
Confidence 9999999999999999999987777899999999999999999999999999999999999999998654 567899999
Q ss_pred cCC-CcEEEcc-ccCCCCccceEEEEC
Q 007704 568 KEG-QGWEEIN-SRAIGKRCFMSVVTV 592 (592)
Q Consensus 568 d~~-~~W~~v~-~~p~~~r~~~savvl 592 (592)
|++ ++|+.++ .+|.+ |+.++++++
T Consensus 273 d~~~~~W~~~~~~~~~~-r~~~~~~~~ 298 (302)
T 2xn4_A 273 NPTTDKWTVVSSCMSTG-RSYAGVTVI 298 (302)
T ss_dssp ETTTTEEEECSSCCSSC-CBSCEEEEE
T ss_pred cCCCCeEEECCcccCcc-cccceEEEe
Confidence 999 9999997 78887 666666653
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=3.9e-43 Score=361.07 Aligned_cols=258 Identities=24% Similarity=0.427 Sum_probs=234.3
Q ss_pred cccccCCCcccc---CCCccCcceEEEEECCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEE
Q 007704 331 ELHLDPSESIYL---PMSSARSYASAAMLNGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKI 407 (592)
Q Consensus 331 ~~~~~p~~~~~~---p~p~~R~~~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~I 407 (592)
.+.++|....|. ++|.+|.+|++++++++|||+||.+ ....+++++||+.+++|+.++++|.+|..|++++++++|
T Consensus 26 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i 104 (306)
T 3ii7_A 26 CRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ-LFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKI 104 (306)
T ss_dssp EEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS-SSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEE
T ss_pred EEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC-CCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEE
Confidence 334555555443 6788999999999999999999988 677899999999999999999999999999999999999
Q ss_pred EEEecCC-CCcccceEEEEeCCCCeEEEcccccCcccceEEEEECCEEEEEeccCCCCC----CCeeEEEeCCCCeEEEe
Q 007704 408 FAIGGGN-GLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAELNGVLYATGGYDGNEY----MNSAERFDPREHYWTKI 482 (592)
Q Consensus 408 yv~GG~~-~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~----~~~v~~yD~~t~~W~~i 482 (592)
||+||.+ .....+++++||+.+++|+.++++|.+|..|+++.++++||++||.+.... ++++++||+.+++|+.+
T Consensus 105 yv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~ 184 (306)
T 3ii7_A 105 YTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTEL 184 (306)
T ss_dssp EEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEE
T ss_pred EEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEEC
Confidence 9999986 566789999999999999999999999999999999999999999887755 89999999999999999
Q ss_pred ccCCCCCceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCCCcccc
Q 007704 483 ANMNRRRGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVD 562 (592)
Q Consensus 483 ~~~p~~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~ 562 (592)
+++|.+|..|++++++++||++||.+.....+++++||+.+++|+.++++|.+|..|++++++++|||+||.++. ...+
T Consensus 185 ~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~-~~~~ 263 (306)
T 3ii7_A 185 CPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGV-GRLG 263 (306)
T ss_dssp CCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEETTEEEEEECBCSS-SBCC
T ss_pred CCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEECCEEEEEeCcCCC-eeee
Confidence 999999999999999999999999887777889999999999999999999999999999999999999998754 5778
Q ss_pred EEEEEcCC-CcEEEccccCCCCccceEEEE
Q 007704 563 TVERFKEG-QGWEEINSRAIGKRCFMSVVT 591 (592)
Q Consensus 563 ~v~~Yd~~-~~W~~v~~~p~~~r~~~savv 591 (592)
++++||++ ++|+.++.+|.+ |+.+++++
T Consensus 264 ~~~~yd~~~~~W~~~~~~~~~-r~~~~~~~ 292 (306)
T 3ii7_A 264 HILEYNTETDKWVANSKVRAF-PVTSCLIC 292 (306)
T ss_dssp EEEEEETTTTEEEEEEEEECC-SCTTCEEE
T ss_pred eEEEEcCCCCeEEeCCCcccc-cceeEEEE
Confidence 99999999 999999999988 55554443
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=4.9e-43 Score=359.21 Aligned_cols=259 Identities=31% Similarity=0.599 Sum_probs=237.7
Q ss_pred ccccCCCcccc---CCCccCcceEEEEECCEEEEEeeCCCCCCcceEEEEECCCCe---EEECCCCCCCCcceEEEEECC
Q 007704 332 LHLDPSESIYL---PMSSARSYASAAMLNGELYIFGGGDGNSWHNTVESYSPANDE---WTSRPSLNGTKGSLAGATIDN 405 (592)
Q Consensus 332 ~~~~p~~~~~~---p~p~~R~~~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~---W~~l~~lp~~r~~~~~~~~~~ 405 (592)
+.+++....|. ++|.+|.+|+++.++++|||+||.++....+++++||+.+++ |+.++++|.+|..|+++.+++
T Consensus 34 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~ 113 (301)
T 2vpj_A 34 EKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGD 113 (301)
T ss_dssp EEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETT
T ss_pred EEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECC
Confidence 34455444443 577899999999999999999999887888999999999999 999999999999999999999
Q ss_pred EEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccC
Q 007704 406 KIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANM 485 (592)
Q Consensus 406 ~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~ 485 (592)
+|||+||..+....+++++||+.+++|+.++++|.+|..|++++++++||++||.++...++++++||+.+++|+.++++
T Consensus 114 ~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~ 193 (301)
T 2vpj_A 114 MIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPM 193 (301)
T ss_dssp EEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCC
T ss_pred EEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCC
Confidence 99999998877778999999999999999999999999999999999999999998888899999999999999999999
Q ss_pred CCCCceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEEE
Q 007704 486 NRRRGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVE 565 (592)
Q Consensus 486 p~~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~ 565 (592)
|.+|..|++++++++||++||.++....+++++||+.+++|+.++++|.+|..|++++++++|||+||.++. ...++++
T Consensus 194 p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~-~~~~~v~ 272 (301)
T 2vpj_A 194 ATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGN-SLLSSIE 272 (301)
T ss_dssp SSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSS-SBEEEEE
T ss_pred CcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEEEEEcCcCCC-cccccEE
Confidence 999999999999999999999987777899999999999999999999999999999999999999998654 4678999
Q ss_pred EEcCC-CcEEEccccCCCCccceEEEEC
Q 007704 566 RFKEG-QGWEEINSRAIGKRCFMSVVTV 592 (592)
Q Consensus 566 ~Yd~~-~~W~~v~~~p~~~r~~~savvl 592 (592)
+||++ ++|+.++++|.+ |+.++|+++
T Consensus 273 ~yd~~~~~W~~~~~~~~~-r~~~~~~~~ 299 (301)
T 2vpj_A 273 CYDPIIDSWEVVTSMGTQ-RCDAGVCVL 299 (301)
T ss_dssp EEETTTTEEEEEEEEEEE-EESCEEEEE
T ss_pred EEcCCCCeEEEcCCCCcc-cccceEEEe
Confidence 99999 999999999987 777777654
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=351.95 Aligned_cols=256 Identities=19% Similarity=0.347 Sum_probs=224.7
Q ss_pred cccCCCccc----cCCCccCcceEEEEECCEEEEEeeCC------CCCCcceEEEEECCCCeEEECCCCCCCCcceEEEE
Q 007704 333 HLDPSESIY----LPMSSARSYASAAMLNGELYIFGGGD------GNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGAT 402 (592)
Q Consensus 333 ~~~p~~~~~----~p~p~~R~~~s~v~~~~~Iyv~GG~~------~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~ 402 (592)
.++|....| .|.|.+|.+|++++++++|||+||.. .....+++++||+.+++|+.++++|.+|..|++++
T Consensus 17 ~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 96 (315)
T 4asc_A 17 AYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGE 96 (315)
T ss_dssp EEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEE
T ss_pred EECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEE
Confidence 345555444 24467899999999999999999951 23345679999999999999999999999999999
Q ss_pred ECCEEEEEecCC---CCcccceEEEEeCCCCeEEEcccccCcccceEEEEECCEEEEEecc-CCCCCCCeeEEEeCCCCe
Q 007704 403 IDNKIFAIGGGN---GLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAELNGVLYATGGY-DGNEYMNSAERFDPREHY 478 (592)
Q Consensus 403 ~~~~Iyv~GG~~---~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~-~~~~~~~~v~~yD~~t~~ 478 (592)
++++|||+||.+ +....+++++||+.+++|+.++++|.+|.+|+++.++++|||+||. +....++++++||+.+++
T Consensus 97 ~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 97 ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCe
Confidence 999999999963 3567899999999999999999999999999999999999999998 555778999999999999
Q ss_pred EEEeccCCCCCceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCC-
Q 007704 479 WTKIANMNRRRGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNG- 557 (592)
Q Consensus 479 W~~i~~~p~~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~- 557 (592)
|+.++++|.+|..|++++++++||++||.++....+++++||+.+++|+.++++|.+|..|++++++++|||+||.+..
T Consensus 177 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~ 256 (315)
T 4asc_A 177 WKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSLVGTLYAIGGFATLE 256 (315)
T ss_dssp EEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEEEEE
T ss_pred EEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEECCEEEEECCccccC
Confidence 9999999999999999999999999999987777889999999999999999999999999999999999999998531
Q ss_pred ---C----ccccEEEEEcCC-CcEEEccccCCCCccceEEEE
Q 007704 558 ---S----EIVDTVERFKEG-QGWEEINSRAIGKRCFMSVVT 591 (592)
Q Consensus 558 ---~----~~~~~v~~Yd~~-~~W~~v~~~p~~~r~~~savv 591 (592)
+ ...+++|+||++ ++|+.+ +|.+ |..+++++
T Consensus 257 ~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~-r~~~~~~~ 295 (315)
T 4asc_A 257 TESGELVPTELNDIWRYNEEEKKWEGV--LREI-AYAAGATF 295 (315)
T ss_dssp CTTSCEEEEEEEEEEEEETTTTEEEEE--ESCS-SCCSSCEE
T ss_pred cCCccccccccCcEEEecCCCChhhhh--ccCC-cCccceEE
Confidence 1 357899999999 999999 4444 55555544
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=2.6e-41 Score=348.65 Aligned_cols=246 Identities=27% Similarity=0.464 Sum_probs=218.8
Q ss_pred CCCccCcceEEEEECCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecC----CCCcc
Q 007704 343 PMSSARSYASAAMLNGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGG----NGLEC 418 (592)
Q Consensus 343 p~p~~R~~~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~----~~~~~ 418 (592)
+.|.+|..|+++.++++||+|||. .....+++++||+.+++|..++++|.+|..|++++++++|||+||. .....
T Consensus 10 ~~~~~~~~~~~~~~~~~i~v~GG~-~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~ 88 (308)
T 1zgk_A 10 SSGLVPRGSHAPKVGRLIYTAGGY-FRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTD 88 (308)
T ss_dssp -----------CCCCCCEEEECCB-SSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEE
T ss_pred cCCeeeCCccccCCCCEEEEEeCc-CCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCee
Confidence 567789999999999999999998 5567899999999999999999999999999999999999999997 55567
Q ss_pred cceEEEEeCCCCeEEEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEEC
Q 007704 419 FSDVEMLDLDIGKWIRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVLN 498 (592)
Q Consensus 419 ~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~~ 498 (592)
.+++++||+.+++|+.++++|.+|..|++++++++|||+||.++...++++++||+.+++|+.++++|.+|..|++++++
T Consensus 89 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 168 (308)
T 1zgk_A 89 SSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLN 168 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEET
T ss_pred cceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEEC
Confidence 88999999999999999999999999999999999999999988878899999999999999999999999999999999
Q ss_pred CEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEEEEEcCC-CcEEEcc
Q 007704 499 GKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG-QGWEEIN 577 (592)
Q Consensus 499 ~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~W~~v~ 577 (592)
++||++||.++....+++++||+.+++|+.++++|.+|..|++++++++|||+||.++. ...+++++||+. ++|+.++
T Consensus 169 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~v~~yd~~~~~W~~~~ 247 (308)
T 1zgk_A 169 RLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQ-DQLNSVERYDVETETWTFVA 247 (308)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSS-SBCCCEEEEETTTTEEEECC
T ss_pred CEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCC-CccceEEEEeCCCCcEEECC
Confidence 99999999987777899999999999999999999999999999999999999998754 568999999999 9999999
Q ss_pred ccCCCCccceEEEE
Q 007704 578 SRAIGKRCFMSVVT 591 (592)
Q Consensus 578 ~~p~~~r~~~savv 591 (592)
++|.+ |..+++++
T Consensus 248 ~~p~~-r~~~~~~~ 260 (308)
T 1zgk_A 248 PMKHR-RSALGITV 260 (308)
T ss_dssp CCSSC-CBSCEEEE
T ss_pred CCCCC-ccceEEEE
Confidence 99987 55555554
No 7
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=3.1e-41 Score=349.33 Aligned_cols=257 Identities=19% Similarity=0.375 Sum_probs=224.4
Q ss_pred ccccCCCcccc----CCCccCcceEEEEECCEEEEEeeCC----C--CCCcceEEEEECCCCeEEECCCCCCCCcceEEE
Q 007704 332 LHLDPSESIYL----PMSSARSYASAAMLNGELYIFGGGD----G--NSWHNTVESYSPANDEWTSRPSLNGTKGSLAGA 401 (592)
Q Consensus 332 ~~~~p~~~~~~----p~p~~R~~~s~v~~~~~Iyv~GG~~----~--~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~ 401 (592)
+.++|....|. +.|.+|.+|+++..+++|||+||.. + ....+++++||+.+++|+.++++|.+|..|+++
T Consensus 27 ~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 106 (318)
T 2woz_A 27 VAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLG 106 (318)
T ss_dssp EEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEE
T ss_pred EEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceE
Confidence 44555555543 4457899999999999999999953 1 123456999999999999999999999999999
Q ss_pred EECCEEEEEecCC--CCcccceEEEEeCCCCeEEEcccccCcccceEEEEECCEEEEEeccCC-CCCCCeeEEEeCCCCe
Q 007704 402 TIDNKIFAIGGGN--GLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAELNGVLYATGGYDG-NEYMNSAERFDPREHY 478 (592)
Q Consensus 402 ~~~~~Iyv~GG~~--~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~-~~~~~~v~~yD~~t~~ 478 (592)
+++++|||+||.. +....+++++||+.+++|+.++++|.+|.+|++++++++|||+||.+. ...++++++||+.+++
T Consensus 107 ~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 107 EVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp EETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred EECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 9999999999975 456788999999999999999999999999999999999999999854 4568999999999999
Q ss_pred EEEeccCCCCCceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCC-
Q 007704 479 WTKIANMNRRRGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNG- 557 (592)
Q Consensus 479 W~~i~~~p~~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~- 557 (592)
|+.++++|.+|..|++++++++||++||.+.....+++++||+.+++|+.++++|.+|..|++++++++|||+||.+..
T Consensus 187 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~ 266 (318)
T 2woz_A 187 WKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSLAGSLYAIGGFAMIQ 266 (318)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEETTEEEEECCBCCBC
T ss_pred EEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEECCEEEEECCeeccC
Confidence 9999999999999999999999999999887767889999999999999999999999999999999999999998652
Q ss_pred -------CccccEEEEEcCC-CcEEEccccCCCCccceEEEE
Q 007704 558 -------SEIVDTVERFKEG-QGWEEINSRAIGKRCFMSVVT 591 (592)
Q Consensus 558 -------~~~~~~v~~Yd~~-~~W~~v~~~p~~~r~~~savv 591 (592)
....+++|+||++ ++|+.+ +|.+ |+.++|++
T Consensus 267 ~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~-r~~~~~~~ 305 (318)
T 2woz_A 267 LESKEFAPTEVNDIWKYEDDKKEWAGM--LKEI-RYASGASC 305 (318)
T ss_dssp ----CCBCCBCCCEEEEETTTTEEEEE--ESCC-GGGTTCEE
T ss_pred CCCceeccceeeeEEEEeCCCCEehhh--cccc-ccccccee
Confidence 1357899999999 999999 5665 55555544
No 8
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=332.67 Aligned_cols=237 Identities=27% Similarity=0.489 Sum_probs=214.1
Q ss_pred EEEEECCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCe
Q 007704 352 SAAMLNGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGK 431 (592)
Q Consensus 352 s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~ 431 (592)
..+.+++.||++||.+. ...+++++||+.+++|..++++|.+|..|++++++++|||+||..+....+++++||+.+++
T Consensus 10 ~~~~~~~~i~v~GG~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 88 (302)
T 2xn4_A 10 TPMNLPKLMVVVGGQAP-KAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQ 88 (302)
T ss_dssp -----CEEEEEECCBSS-SBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTE
T ss_pred cccCCCCEEEEECCCCC-CCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCc
Confidence 34457899999999765 45789999999999999999999999999999999999999998877788999999999999
Q ss_pred EEEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEECCEEEEEecCCCC-
Q 007704 432 WIRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVLNGKLYALGGFDGS- 510 (592)
Q Consensus 432 W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~~~~Lyv~GG~~~~- 510 (592)
|+.++++|.+|..|++++++++|||+||.++...++++++||+.+++|+.++++|.+|..|++++++++||++||.+..
T Consensus 89 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 168 (302)
T 2xn4_A 89 WTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVAS 168 (302)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTT
T ss_pred eeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCC
Confidence 9999999999999999999999999999988888899999999999999999999999999999999999999998655
Q ss_pred -CCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEEEEEcCC-CcEEEccccCCCCccceE
Q 007704 511 -AMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG-QGWEEINSRAIGKRCFMS 588 (592)
Q Consensus 511 -~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~W~~v~~~p~~~r~~~s 588 (592)
...+++++||+.+++|+.++++|.+|..|++++++++|||+||.++. ...+++++||+. ++|+.++++|.+ |..++
T Consensus 169 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~~~~-r~~~~ 246 (302)
T 2xn4_A 169 RQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGP-LVRKSVEVYDPTTNAWRQVADMNMC-RRNAG 246 (302)
T ss_dssp TEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSS-SBCCCEEEEETTTTEEEEECCCSSC-CBSCE
T ss_pred CccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCC-cccceEEEEeCCCCCEeeCCCCCCc-cccCe
Confidence 34789999999999999999999999999999999999999998654 567899999999 999999999988 55555
Q ss_pred EEE
Q 007704 589 VVT 591 (592)
Q Consensus 589 avv 591 (592)
+++
T Consensus 247 ~~~ 249 (302)
T 2xn4_A 247 VCA 249 (302)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=332.83 Aligned_cols=235 Identities=32% Similarity=0.645 Sum_probs=218.2
Q ss_pred EECCEEEEEee-CCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCe--
Q 007704 355 MLNGELYIFGG-GDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGK-- 431 (592)
Q Consensus 355 ~~~~~Iyv~GG-~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~-- 431 (592)
.++++||++|| .++....+++++||+.+++|..++++|.+|..|+++.++++|||+||..+....+++++||+.+++
T Consensus 12 ~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 12 GANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp -CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred cCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 36899999999 666778899999999999999999999999999999999999999998877788999999999999
Q ss_pred -EEEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEECCEEEEEecCCCC
Q 007704 432 -WIRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVLNGKLYALGGFDGS 510 (592)
Q Consensus 432 -W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~~~~Lyv~GG~~~~ 510 (592)
|+.++++|.+|..|+++.++++||++||.++...++++++||+.+++|+.++++|.+|..|++++++++||++||.++.
T Consensus 92 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 171 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGL 171 (301)
T ss_dssp CCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSS
T ss_pred eeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCC
Confidence 9999999999999999999999999999988878899999999999999999999999999999999999999999887
Q ss_pred CCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEEEEEcCC-CcEEEccccCCCCccceEE
Q 007704 511 AMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG-QGWEEINSRAIGKRCFMSV 589 (592)
Q Consensus 511 ~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~W~~v~~~p~~~r~~~sa 589 (592)
...+++++||+.+++|+.++++|.+|..|++++++++|||+||.+.. ...+++++||+. ++|+.++.+|.+ |+.+++
T Consensus 172 ~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~-~~~~~v~~yd~~~~~W~~~~~~p~~-r~~~~~ 249 (301)
T 2vpj_A 172 NILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGT-AHLSSVEAYNIRTDSWTTVTSMTTP-RCYVGA 249 (301)
T ss_dssp CBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSS-SBCCCEEEEETTTTEEEEECCCSSC-CBSCEE
T ss_pred cccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCC-cccceEEEEeCCCCcEEECCCCCCc-ccceeE
Confidence 78899999999999999999999999999999999999999998754 457899999999 999999999988 555555
Q ss_pred EE
Q 007704 590 VT 591 (592)
Q Consensus 590 vv 591 (592)
++
T Consensus 250 ~~ 251 (301)
T 2vpj_A 250 TV 251 (301)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 10
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=333.19 Aligned_cols=229 Identities=24% Similarity=0.407 Sum_probs=212.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeEEEcc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTR 436 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~ 436 (592)
.+.||+|||... .+++++||+.+++|..++++|.+|..|++++++++|||+||.. ....+++++||+.+++|+.++
T Consensus 11 ~~~l~~~GG~~~---~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~~~~~W~~~~ 86 (306)
T 3ii7_A 11 HDYRIALFGGSQ---PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ-LFPIKRMDCYNVVKDSWYSKL 86 (306)
T ss_dssp CCEEEEEECCSS---TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS-SSBCCEEEEEETTTTEEEEEE
T ss_pred cceEEEEeCCCC---CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC-CCCcceEEEEeCCCCeEEECC
Confidence 488999999765 7899999999999999999999999999999999999999987 667899999999999999999
Q ss_pred cccCcccceEEEEECCEEEEEeccC-CCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEECCEEEEEecCCCCCC---
Q 007704 437 SMLQKRFALAAAELNGVLYATGGYD-GNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVLNGKLYALGGFDGSAM--- 512 (592)
Q Consensus 437 ~~p~~R~~~~a~~~~g~IYV~GG~~-~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~~~~Lyv~GG~~~~~~--- 512 (592)
++|.+|..|++++++++|||+||.+ +...++++++||+.+++|+.++++|.+|..|++++++++||++||.+....
T Consensus 87 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 166 (306)
T 3ii7_A 87 GPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGR 166 (306)
T ss_dssp CCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCE
T ss_pred CCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCccc
Confidence 9999999999999999999999998 557789999999999999999999999999999999999999999876654
Q ss_pred -CCeEEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEEEEEcCC-CcEEEccccCCCCccceEEE
Q 007704 513 -VPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG-QGWEEINSRAIGKRCFMSVV 590 (592)
Q Consensus 513 -~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~W~~v~~~p~~~r~~~sav 590 (592)
.+++++||+.+++|+.++++|.+|..|++++++++|||+||.+.. ...+++++||+. ++|+.++.+|.+ |..++++
T Consensus 167 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~ 244 (306)
T 3ii7_A 167 VLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGL-GGLDNVEYYDIKLNEWKMVSPMPWK-GVTVKCA 244 (306)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETT-EEBCCEEEEETTTTEEEECCCCSCC-BSCCEEE
T ss_pred ccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCC-CCCceEEEeeCCCCcEEECCCCCCC-ccceeEE
Confidence 899999999999999999999999999999999999999998765 567899999999 999999999987 5555555
Q ss_pred E
Q 007704 591 T 591 (592)
Q Consensus 591 v 591 (592)
+
T Consensus 245 ~ 245 (306)
T 3ii7_A 245 A 245 (306)
T ss_dssp E
T ss_pred E
Confidence 4
No 11
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=2.7e-38 Score=332.07 Aligned_cols=244 Identities=17% Similarity=0.241 Sum_probs=208.0
Q ss_pred CCCccCcceEEEEECCEEEEEeeCCCCCCcceEEEEECC--CCeEEECCCCC-CCCcceEEEEECCEEEEEecC-C----
Q 007704 343 PMSSARSYASAAMLNGELYIFGGGDGNSWHNTVESYSPA--NDEWTSRPSLN-GTKGSLAGATIDNKIFAIGGG-N---- 414 (592)
Q Consensus 343 p~p~~R~~~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~--t~~W~~l~~lp-~~r~~~~~~~~~~~Iyv~GG~-~---- 414 (592)
++|.+|.+|++++++++|||+||.++ +++++||+. +++|+.++++| .+|..|++++++++|||+||. .
T Consensus 5 ~lP~~r~~~~~~~~~~~iyv~GG~~~----~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~ 80 (357)
T 2uvk_A 5 ETPVPFKSGTGAIDNDTVYIGLGSAG----TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEG 80 (357)
T ss_dssp CCSSCCCSCEEEEETTEEEEECGGGT----TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTS
T ss_pred CCCccccceEEEEECCEEEEEeCcCC----CeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCc
Confidence 67889999999999999999999764 479999998 49999999999 899999999999999999997 3
Q ss_pred CCcccceEEEEeCCCCeEEEccccc-CcccceEEEEECCEEEEEeccCCC------------------------------
Q 007704 415 GLECFSDVEMLDLDIGKWIRTRSML-QKRFALAAAELNGVLYATGGYDGN------------------------------ 463 (592)
Q Consensus 415 ~~~~~~~v~~yD~~t~~W~~i~~~p-~~R~~~~a~~~~g~IYV~GG~~~~------------------------------ 463 (592)
....++++++||+.+++|+.+++++ .+|.+|++++++++|||+||.+..
T Consensus 81 ~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (357)
T 2uvk_A 81 LTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKK 160 (357)
T ss_dssp CEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSC
T ss_pred cceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcccc
Confidence 2346789999999999999999988 999999999999999999998643
Q ss_pred ----CCCCeeEEEeCCCCeEEEeccCCCCCce-eEEEEECCEEEEEecCCCC-CCCCeEEEEeC--CCCeEEEcCCCCCC
Q 007704 464 ----EYMNSAERFDPREHYWTKIANMNRRRGC-HSLAVLNGKLYALGGFDGS-AMVPSIEVYDP--RLGSWMSGEPMKLS 535 (592)
Q Consensus 464 ----~~~~~v~~yD~~t~~W~~i~~~p~~R~~-~s~v~~~~~Lyv~GG~~~~-~~~~~v~~yD~--~t~~W~~v~~lp~~ 535 (592)
..++++++||+.+++|+.++++|.+|.. |++++++++|||+||.+.. ...++++.||+ .+++|+.+.++|.+
T Consensus 161 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~ 240 (357)
T 2uvk_A 161 AEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSP 240 (357)
T ss_dssp GGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTT
T ss_pred ccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCC
Confidence 2568999999999999999999976554 9999999999999997644 35778999986 89999999988776
Q ss_pred C--cceEEEEECCEEEEEecccCCC----------------ccccEEEEEcCC-CcEEEccccCCCCccceEEEE
Q 007704 536 R--GYLGAAVVKEAIYVIGGVKNGS----------------EIVDTVERFKEG-QGWEEINSRAIGKRCFMSVVT 591 (592)
Q Consensus 536 R--~~~s~~v~~~~Iyv~GG~~~~~----------------~~~~~v~~Yd~~-~~W~~v~~~p~~~r~~~savv 591 (592)
| ..|++++++++|||+||.+..+ ....++++||+. ++|+.++.+|.+ |+.++|++
T Consensus 241 ~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~ 314 (357)
T 2uvk_A 241 DGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQG-RAYGVSLP 314 (357)
T ss_dssp TCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSC-CBSSEEEE
T ss_pred cccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCC-cccceeEE
Confidence 4 5778999999999999975431 234689999999 999999999988 56566654
No 12
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=6.3e-37 Score=316.56 Aligned_cols=225 Identities=21% Similarity=0.356 Sum_probs=201.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCC--CCCCcceEEEEECCEEEEEecC-----C-CCcccceEEEEeCC
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSL--NGTKGSLAGATIDNKIFAIGGG-----N-GLECFSDVEMLDLD 428 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~l--p~~r~~~~~~~~~~~Iyv~GG~-----~-~~~~~~~v~~yD~~ 428 (592)
++.||++|| +++++||+.+++|.. +++ |.+|..|++++++++|||+||. . .....+++++||+.
T Consensus 4 ~~~l~~~GG-------~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~ 75 (315)
T 4asc_A 4 QDLIFMISE-------EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHL 75 (315)
T ss_dssp EEEEEEEET-------TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETT
T ss_pred ceEEEEEcC-------CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCC
Confidence 467999999 689999999999987 555 4589999999999999999995 1 12244679999999
Q ss_pred CCeEEEcccccCcccceEEEEECCEEEEEeccC---CCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEECCEEEEEe
Q 007704 429 IGKWIRTRSMLQKRFALAAAELNGVLYATGGYD---GNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVLNGKLYALG 505 (592)
Q Consensus 429 t~~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~---~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~~~~Lyv~G 505 (592)
+++|+.++++|.+|..|+++.++++|||+||.+ +...++++++||+.+++|+.++++|.+|..|++++++++||++|
T Consensus 76 ~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 155 (315)
T 4asc_A 76 DSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIG 155 (315)
T ss_dssp TTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEC
T ss_pred CCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEe
Confidence 999999999999999999999999999999975 35678999999999999999999999999999999999999999
Q ss_pred cC-CCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEEEEEcCC-CcEEEccccCCCC
Q 007704 506 GF-DGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG-QGWEEINSRAIGK 583 (592)
Q Consensus 506 G~-~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~W~~v~~~p~~~ 583 (592)
|. +.....+++++||+.+++|+.++++|.+|..|++++++++|||+||.++. ...+++++||++ ++|+.++++|.+
T Consensus 156 G~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~- 233 (315)
T 4asc_A 156 GKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDT-GLTSSAEVYSITDNKWAPFEAFPQE- 233 (315)
T ss_dssp CBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSS-SEEEEEEEEETTTTEEEEECCCSSC-
T ss_pred CCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCC-CccceEEEEECCCCeEEECCCCCCc-
Confidence 98 55577899999999999999999999999999999999999999998765 468899999999 999999999888
Q ss_pred ccceEEEE
Q 007704 584 RCFMSVVT 591 (592)
Q Consensus 584 r~~~savv 591 (592)
|+.+++++
T Consensus 234 r~~~~~~~ 241 (315)
T 4asc_A 234 RSSLSLVS 241 (315)
T ss_dssp CBSCEEEE
T ss_pred ccceeEEE
Confidence 55665554
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=7.5e-37 Score=321.04 Aligned_cols=239 Identities=18% Similarity=0.193 Sum_probs=201.0
Q ss_pred CCC-ccCcceEEEEECCEEEEEeeC-C----CCCCcceEEEEECCCCeEEECCCCC-CCCcceEEEEECCEEEEEecCCC
Q 007704 343 PMS-SARSYASAAMLNGELYIFGGG-D----GNSWHNTVESYSPANDEWTSRPSLN-GTKGSLAGATIDNKIFAIGGGNG 415 (592)
Q Consensus 343 p~p-~~R~~~s~v~~~~~Iyv~GG~-~----~~~~~~~v~~yd~~t~~W~~l~~lp-~~r~~~~~~~~~~~Iyv~GG~~~ 415 (592)
++| .+|.+|++++++++||||||. + ....++++++||+.+++|+.+++++ .+|..|++++++++|||+||.+.
T Consensus 50 ~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 129 (357)
T 2uvk_A 50 AFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQ 129 (357)
T ss_dssp CCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCH
T ss_pred CCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCC
Confidence 678 799999999999999999997 2 2456899999999999999999988 89999999999999999999764
Q ss_pred C----------------------------------cccceEEEEeCCCCeEEEcccccCcccc-eEEEEECCEEEEEecc
Q 007704 416 L----------------------------------ECFSDVEMLDLDIGKWIRTRSMLQKRFA-LAAAELNGVLYATGGY 460 (592)
Q Consensus 416 ~----------------------------------~~~~~v~~yD~~t~~W~~i~~~p~~R~~-~~a~~~~g~IYV~GG~ 460 (592)
. ...+++++||+.+++|+.++++|.+|.. |++++++++|||+||.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~ 209 (357)
T 2uvk_A 130 NIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGE 209 (357)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCE
T ss_pred CcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeee
Confidence 3 2468999999999999999999987655 9999999999999998
Q ss_pred CCC-CCCCeeEEEeC--CCCeEEEeccCCCC--CceeEEEEECCEEEEEecCCCC-----------------CCCCeEEE
Q 007704 461 DGN-EYMNSAERFDP--REHYWTKIANMNRR--RGCHSLAVLNGKLYALGGFDGS-----------------AMVPSIEV 518 (592)
Q Consensus 461 ~~~-~~~~~v~~yD~--~t~~W~~i~~~p~~--R~~~s~v~~~~~Lyv~GG~~~~-----------------~~~~~v~~ 518 (592)
+.. ...+++++||+ .+++|+.+++++.+ |.+|++++++++|||+||.+.. ..++++++
T Consensus 210 ~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 289 (357)
T 2uvk_A 210 AKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDI 289 (357)
T ss_dssp EETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEE
T ss_pred cCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEE
Confidence 654 34678999986 99999999988655 5678899999999999996421 23467999
Q ss_pred EeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEEEEEcCC-CcEEEccccCC
Q 007704 519 YDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG-QGWEEINSRAI 581 (592)
Q Consensus 519 yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~W~~v~~~p~ 581 (592)
||+.+++|+.++++|.+|..|++++++++||||||.+..+..+++|++|+.+ ++|.+....|-
T Consensus 290 yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~~~ 353 (357)
T 2uvk_A 290 HLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLEHH 353 (357)
T ss_dssp EECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC----
T ss_pred EecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeecccc
Confidence 9999999999999999999999999999999999998766678999999999 99999877654
No 14
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=4.6e-36 Score=310.50 Aligned_cols=234 Identities=22% Similarity=0.387 Sum_probs=202.4
Q ss_pred ccCcceEEEEECCEEEEEeeCCCCCCcceEEEEECCCCeEEECC-CCCCCCcceEEEEECCEEEEEecCC--C----Ccc
Q 007704 346 SARSYASAAMLNGELYIFGGGDGNSWHNTVESYSPANDEWTSRP-SLNGTKGSLAGATIDNKIFAIGGGN--G----LEC 418 (592)
Q Consensus 346 ~~R~~~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~-~lp~~r~~~~~~~~~~~Iyv~GG~~--~----~~~ 418 (592)
.+|..+. .++.||+||| .++++||+.+++|...+ +.+.+|..|+++..+++|||+||.. . ...
T Consensus 7 ~~r~~~~---~~~~i~~~GG-------~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 76 (318)
T 2woz_A 7 IPRHGMF---VKDLILLVND-------TAAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPL 76 (318)
T ss_dssp SCCCCCS---EEEEEEEECS-------SEEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CC
T ss_pred cccccce---ecchhhhccc-------cceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCc
Confidence 3555433 2468999999 35899999999998843 2246899999999999999999952 1 123
Q ss_pred cceEEEEeCCCCeEEEcccccCcccceEEEEECCEEEEEeccC--CCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEE
Q 007704 419 FSDVEMLDLDIGKWIRTRSMLQKRFALAAAELNGVLYATGGYD--GNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAV 496 (592)
Q Consensus 419 ~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~--~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~ 496 (592)
.+++++||+.+++|+.++++|.+|..|++++++++|||+||.+ ....++++++||+.+++|+.++++|.+|.+|++++
T Consensus 77 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 156 (318)
T 2woz_A 77 QSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS 156 (318)
T ss_dssp CBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE
T ss_pred cccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE
Confidence 3469999999999999999999999999999999999999986 45678999999999999999999999999999999
Q ss_pred ECCEEEEEecCC-CCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEEEEEcCC-CcEE
Q 007704 497 LNGKLYALGGFD-GSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG-QGWE 574 (592)
Q Consensus 497 ~~~~Lyv~GG~~-~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~W~ 574 (592)
++++||++||.+ .....+++++||+.+++|+.++++|.+|..|++++++++|||+||.+.. ...+++++||+. ++|+
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~ 235 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTED-GLSASVEAFDLKTNKWE 235 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETT-EEEEEEEEEETTTCCEE
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCC-CccceEEEEECCCCeEE
Confidence 999999999974 3456889999999999999999999999999999999999999998764 578899999999 9999
Q ss_pred EccccCCCCccceEEEE
Q 007704 575 EINSRAIGKRCFMSVVT 591 (592)
Q Consensus 575 ~v~~~p~~~r~~~savv 591 (592)
.++++|.+ |..+++++
T Consensus 236 ~~~~~p~~-r~~~~~~~ 251 (318)
T 2woz_A 236 VMTEFPQE-RSSISLVS 251 (318)
T ss_dssp ECCCCSSC-CBSCEEEE
T ss_pred ECCCCCCc-ccceEEEE
Confidence 99999987 66666554
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=1.3e-34 Score=331.68 Aligned_cols=242 Identities=14% Similarity=0.174 Sum_probs=208.3
Q ss_pred CccCcceEEEEECCEEEEEeeCCCCCCcceEEEEECCCCeEEECC-C-----CCCCCcceEEEEE--CCEEEEEecCCCC
Q 007704 345 SSARSYASAAMLNGELYIFGGGDGNSWHNTVESYSPANDEWTSRP-S-----LNGTKGSLAGATI--DNKIFAIGGGNGL 416 (592)
Q Consensus 345 p~~R~~~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~-~-----lp~~r~~~~~~~~--~~~Iyv~GG~~~~ 416 (592)
|.+|.+ ++++++++|||+||.++ ...+++++||+.+++|+.++ + +|.+|.+|+++++ +++|||+||....
T Consensus 386 p~rr~g-~~~~~~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~ 463 (695)
T 2zwa_A 386 INRKFG-DVDVAGNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAP 463 (695)
T ss_dssp TCCBSC-EEEECSSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSST
T ss_pred CCCcee-EEEEECCEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCC
Confidence 344444 45558999999999887 78899999999999999987 5 7899999999999 9999999998664
Q ss_pred c-ccceEEEEeCCCCeEEEcccccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEecc---CCCCCce
Q 007704 417 E-CFSDVEMLDLDIGKWIRTRSMLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIAN---MNRRRGC 491 (592)
Q Consensus 417 ~-~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~---~p~~R~~ 491 (592)
. .++++|+||+.+++|+.++++|.+|++|+++++ +++|||+||.+... ++++||+.+++|+.+++ +|.+|.+
T Consensus 464 ~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~~g~~p~~r~~ 540 (695)
T 2zwa_A 464 HQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTPKDEFFQNSLV 540 (695)
T ss_dssp TCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCCSSGGGGSCCB
T ss_pred CCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccCCCCCCCcccc
Confidence 4 789999999999999999999999999999997 99999999987665 89999999999999986 8899999
Q ss_pred eEEEEEC---CEEEEEecCCCC--CCCCeEEEEeCCCCe------EEEcCCC-CCCCcceEEEEEC-CEEEEEecccCCC
Q 007704 492 HSLAVLN---GKLYALGGFDGS--AMVPSIEVYDPRLGS------WMSGEPM-KLSRGYLGAAVVK-EAIYVIGGVKNGS 558 (592)
Q Consensus 492 ~s~v~~~---~~Lyv~GG~~~~--~~~~~v~~yD~~t~~------W~~v~~l-p~~R~~~s~~v~~-~~Iyv~GG~~~~~ 558 (592)
|++++++ ++|||+||.+.. ...+++++||+.+++ |+.+.++ +.+|.+|++++++ ++|||+||.+...
T Consensus 541 ~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~ 620 (695)
T 2zwa_A 541 SAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSG 620 (695)
T ss_dssp SCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSC
T ss_pred eeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCC
Confidence 9988876 999999998543 568999999999999 9999876 5889999999999 9999999987553
Q ss_pred --ccccEEEEEcCC-CcEEEcccc------CCCCccceEEEE
Q 007704 559 --EIVDTVERFKEG-QGWEEINSR------AIGKRCFMSVVT 591 (592)
Q Consensus 559 --~~~~~v~~Yd~~-~~W~~v~~~------p~~~r~~~savv 591 (592)
...+++++||+. ++|+.++.. |.+.+..|++++
T Consensus 621 ~~~~~~~v~~yd~~t~~W~~~~~p~~~~~~~~p~~~gh~~~~ 662 (695)
T 2zwa_A 621 LFDRTNSIISLDPLSETLTSIPISRRIWEDHSLMLAGFSLVS 662 (695)
T ss_dssp CCCTTTSEEEEETTTTEEEECCCCHHHHHHSCCCCSSCEEEC
T ss_pred CCCCCCeEEEEECCCCeEEEeeccccccCCCCccceeeeEEE
Confidence 368999999999 999965321 123455666654
No 16
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.97 E-value=2.8e-31 Score=302.09 Aligned_cols=257 Identities=19% Similarity=0.313 Sum_probs=205.8
Q ss_pred ccccccCCCccccCC-CccCcceEEEEE--CCEEEEEeeCCCCC------CcceEEEEECCCCeEEECCCCCCCCcceE-
Q 007704 330 DELHLDPSESIYLPM-SSARSYASAAML--NGELYIFGGGDGNS------WHNTVESYSPANDEWTSRPSLNGTKGSLA- 399 (592)
Q Consensus 330 ~~~~~~p~~~~~~p~-p~~R~~~s~v~~--~~~Iyv~GG~~~~~------~~~~v~~yd~~t~~W~~l~~lp~~r~~~~- 399 (592)
.+..++|....|.+. |.||..++++++ +++|||+||.+... ..+++++||+.+++|+.++.+|.+|..|+
T Consensus 167 ~~~~~dp~~~~W~~~~~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~ 246 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCP 246 (656)
T ss_dssp CCCCCCTTSCEEEEEEECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSC
T ss_pred ccccCCCCCCeeeeeccCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccc
Confidence 356677877777632 345666677777 99999999976422 34689999999999999998888876654
Q ss_pred -EEE-ECCEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEE-CCEEEEEec-cCCCCCCCeeEEEeCC
Q 007704 400 -GAT-IDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAEL-NGVLYATGG-YDGNEYMNSAERFDPR 475 (592)
Q Consensus 400 -~~~-~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~-~g~IYV~GG-~~~~~~~~~v~~yD~~ 475 (592)
++. .+++||++||... .++++||+.+++|+++++|+.+|..|+++++ +++|||+|| .++...++++++||+.
T Consensus 247 ~~~~~~~g~lyv~GG~~~----~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDA----KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp EEEECTTSCEEEECSSST----TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred cccCCCCCCEEEeCCCCC----CceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 333 5899999999654 3899999999999999999999999999999 999999999 5666678999999999
Q ss_pred CCeEEEe-----ccCCCC---------------------------------------------------------CceeE
Q 007704 476 EHYWTKI-----ANMNRR---------------------------------------------------------RGCHS 493 (592)
Q Consensus 476 t~~W~~i-----~~~p~~---------------------------------------------------------R~~~s 493 (592)
+++|+.+ .+++.. +..++
T Consensus 323 t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~ 402 (656)
T 1k3i_A 323 SKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGN 402 (656)
T ss_dssp TTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCE
T ss_pred CCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCc
Confidence 9999997 333332 12344
Q ss_pred EEE---ECCEEEEEecCCC---CCCCC---eEEEEeCCCCeEEEcC--CCCCCCcceEEEEE-CCEEEEEecccCC----
Q 007704 494 LAV---LNGKLYALGGFDG---SAMVP---SIEVYDPRLGSWMSGE--PMKLSRGYLGAAVV-KEAIYVIGGVKNG---- 557 (592)
Q Consensus 494 ~v~---~~~~Lyv~GG~~~---~~~~~---~v~~yD~~t~~W~~v~--~lp~~R~~~s~~v~-~~~Iyv~GG~~~~---- 557 (592)
++. .+++||++||.+. ...++ ++++||+.+++|..+. +||.+|..|+++++ +++|||+||.+..
T Consensus 403 av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~ 482 (656)
T 1k3i_A 403 AVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFE 482 (656)
T ss_dssp EEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTC
T ss_pred eEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcC
Confidence 443 3899999999643 23445 7899999999999986 99999999999988 9999999997632
Q ss_pred -CccccEEEEEcCC-CcEEEccccCCCCccceEEEE
Q 007704 558 -SEIVDTVERFKEG-QGWEEINSRAIGKRCFMSVVT 591 (592)
Q Consensus 558 -~~~~~~v~~Yd~~-~~W~~v~~~p~~~r~~~savv 591 (592)
.....++++||+. ++|+.++.+|.+ |..|++++
T Consensus 483 ~~~~~~~v~~ydp~t~~W~~~~~~~~~-R~~hs~a~ 517 (656)
T 1k3i_A 483 DSTPVFTPEIYVPEQDTFYKQNPNSIV-RVYHSISL 517 (656)
T ss_dssp CCSBCCCCEEEEGGGTEEEECCCCSSC-CCTTEEEE
T ss_pred CCCcccceEEEcCCCCceeecCCCCCc-cccccHhh
Confidence 2467899999999 999999999988 55555443
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.97 E-value=5.3e-31 Score=301.73 Aligned_cols=236 Identities=17% Similarity=0.144 Sum_probs=198.1
Q ss_pred cccccCCCcccc----C-----CCccCcceEEEEE--CCEEEEEeeCCCCC-CcceEEEEECCCCeEEECCCCCCCCcce
Q 007704 331 ELHLDPSESIYL----P-----MSSARSYASAAML--NGELYIFGGGDGNS-WHNTVESYSPANDEWTSRPSLNGTKGSL 398 (592)
Q Consensus 331 ~~~~~p~~~~~~----p-----~p~~R~~~s~v~~--~~~Iyv~GG~~~~~-~~~~v~~yd~~t~~W~~l~~lp~~r~~~ 398 (592)
.+.+++....|. + +|.+|.+|+++++ +++|||+||.++.. .++++|+||+.+++|+.++++|.+|..|
T Consensus 414 v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h 493 (695)
T 2zwa_A 414 ILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRH 493 (695)
T ss_dssp EEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSC
T ss_pred EEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccc
Confidence 344555555443 2 7889999999999 99999999987643 7899999999999999999999999999
Q ss_pred EEEEE-CCEEEEEecCCCCcccceEEEEeCCCCeEEEccc---ccCcccceEEEEEC---CEEEEEeccCCC--CCCCee
Q 007704 399 AGATI-DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRS---MLQKRFALAAAELN---GVLYATGGYDGN--EYMNSA 469 (592)
Q Consensus 399 ~~~~~-~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~---~p~~R~~~~a~~~~---g~IYV~GG~~~~--~~~~~v 469 (592)
+++++ +++|||+||.+... ++++||+.+++|+.+++ +|.+|.+|++++++ ++|||+||.+.. ..++++
T Consensus 494 ~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v 570 (695)
T 2zwa_A 494 SACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKA 570 (695)
T ss_dssp EEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEE
T ss_pred eEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcE
Confidence 99997 99999999976654 99999999999999986 89999999988877 899999998543 678999
Q ss_pred EEEeCCCCe------EEEeccC-CCCCceeEEEEEC-CEEEEEecCCCCC---CCCeEEEEeCCCCeEEEcCCCC-----
Q 007704 470 ERFDPREHY------WTKIANM-NRRRGCHSLAVLN-GKLYALGGFDGSA---MVPSIEVYDPRLGSWMSGEPMK----- 533 (592)
Q Consensus 470 ~~yD~~t~~------W~~i~~~-p~~R~~~s~v~~~-~~Lyv~GG~~~~~---~~~~v~~yD~~t~~W~~v~~lp----- 533 (592)
++||+.+++ |+.+.++ +.+|.+|++++++ ++|||+||.+... ..+++++||+.+++|+.+. +|
T Consensus 571 ~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~-~p~~~~~ 649 (695)
T 2zwa_A 571 IIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIP-ISRRIWE 649 (695)
T ss_dssp EEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECC-CCHHHHH
T ss_pred EEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEee-ccccccC
Confidence 999999999 9999876 5899999999998 9999999987553 5889999999999999753 22
Q ss_pred ---CCCcceEEEEECC-EEEEEecccC---CCccccEEEEEcCC
Q 007704 534 ---LSRGYLGAAVVKE-AIYVIGGVKN---GSEIVDTVERFKEG 570 (592)
Q Consensus 534 ---~~R~~~s~~v~~~-~Iyv~GG~~~---~~~~~~~v~~Yd~~ 570 (592)
..+.+|+++++++ +|||+||... -+.+.+.+|.+|..
T Consensus 650 ~~~p~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~n~i~~ldl~ 693 (695)
T 2zwa_A 650 DHSLMLAGFSLVSTSMGTIHIIGGGATCYGFGSVTNVGLKLIAI 693 (695)
T ss_dssp HSCCCCSSCEEECC---CEEEECCEEECTTSCEEECCCEEEEEC
T ss_pred CCCccceeeeEEEeCCCEEEEEeCCccCcCccccccceEEEEEE
Confidence 2456788888766 9999999643 24567788888753
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.95 E-value=1.2e-27 Score=272.05 Aligned_cols=235 Identities=23% Similarity=0.348 Sum_probs=187.6
Q ss_pred ccccCCCccccC---CCccCcce--EEEE-ECCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE-C
Q 007704 332 LHLDPSESIYLP---MSSARSYA--SAAM-LNGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI-D 404 (592)
Q Consensus 332 ~~~~p~~~~~~p---~p~~R~~~--s~v~-~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~ 404 (592)
+.+++....|.+ +|.+|..+ +++. .+++||++||.+.. ++++||+.+++|..+++|+.+|..|+++++ +
T Consensus 222 ~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~d 297 (656)
T 1k3i_A 222 SSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSDSWIPGPDMQVARGYQSSATMSD 297 (656)
T ss_dssp EEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGTEEEECCCCSSCCSSCEEEECTT
T ss_pred EEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCC----ceEEecCcCCceeECCCCCccccccceEEecC
Confidence 446666666553 44456544 3444 48999999997653 799999999999999999999999999999 9
Q ss_pred CEEEEEec-CCCCcccceEEEEeCCCCeEEEc-----ccccCcc------------------------------------
Q 007704 405 NKIFAIGG-GNGLECFSDVEMLDLDIGKWIRT-----RSMLQKR------------------------------------ 442 (592)
Q Consensus 405 ~~Iyv~GG-~~~~~~~~~v~~yD~~t~~W~~i-----~~~p~~R------------------------------------ 442 (592)
++|||+|| .++....+++++||+.+++|+.+ .+++..|
T Consensus 298 g~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~ 377 (656)
T 1k3i_A 298 GRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTS 377 (656)
T ss_dssp SCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECS
T ss_pred CeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecC
Confidence 99999999 56666789999999999999986 3343321
Q ss_pred ---------------------cceEEEE---ECCEEEEEeccCC---CCCCC---eeEEEeCCCCeEEEec--cCCCCCc
Q 007704 443 ---------------------FALAAAE---LNGVLYATGGYDG---NEYMN---SAERFDPREHYWTKIA--NMNRRRG 490 (592)
Q Consensus 443 ---------------------~~~~a~~---~~g~IYV~GG~~~---~~~~~---~v~~yD~~t~~W~~i~--~~p~~R~ 490 (592)
..++++. .+++|||+||.+. ...++ ++++||+.++.|..+. +||.+|.
T Consensus 378 ~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~ 457 (656)
T 1k3i_A 378 GSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFART 457 (656)
T ss_dssp TTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCB
T ss_pred CcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcc
Confidence 1233443 3899999999643 33445 7899999999999986 9999999
Q ss_pred eeEEEEE-CCEEEEEecCCC------CCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecccCCC--c
Q 007704 491 CHSLAVL-NGKLYALGGFDG------SAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV--KEAIYVIGGVKNGS--E 559 (592)
Q Consensus 491 ~~s~v~~-~~~Lyv~GG~~~------~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~--~~~Iyv~GG~~~~~--~ 559 (592)
.|+++++ +++|||+||.+. .....++++||+.+++|+.+++++.+|.+|+++++ +++|||+||..... .
T Consensus 458 ~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~~~~~~~~ 537 (656)
T 1k3i_A 458 FHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTT 537 (656)
T ss_dssp SCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECCCCTTCSC
T ss_pred cCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCCCCCCCCC
Confidence 9999998 999999999752 34578899999999999999999999999999988 99999999964321 1
Q ss_pred cccEEEEEcCC
Q 007704 560 IVDTVERFKEG 570 (592)
Q Consensus 560 ~~~~v~~Yd~~ 570 (592)
..-++++|.|.
T Consensus 538 ~~~~~e~~~Pp 548 (656)
T 1k3i_A 538 NHFDAQIFTPN 548 (656)
T ss_dssp CCCEEEEEECG
T ss_pred CeeEEEEEeCh
Confidence 23457888875
No 19
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.90 E-value=0.0038 Score=61.55 Aligned_cols=192 Identities=18% Similarity=0.174 Sum_probs=126.4
Q ss_pred CCCccCcceEEEEECCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceE
Q 007704 343 PMSSARSYASAAMLNGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDV 422 (592)
Q Consensus 343 p~p~~R~~~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v 422 (592)
|.+..-.-..+...++.+|+-.|..+. +.+..+|+.+++-...-.++......+++..+++||+.... .+.+
T Consensus 16 phd~~~ftqGL~~~~~~LyestG~~g~---S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~-----~~~v 87 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLRGHLYESTGETGR---SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR-----NHEG 87 (243)
T ss_dssp ECCTTCCEEEEEEETTEEEEEECCTTS---CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS-----SSEE
T ss_pred CCCCccccccEEEECCEEEEECCCCCC---ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee-----CCEE
Confidence 443344455777779999999996542 46899999999876655566656667788889999999643 3689
Q ss_pred EEEeCCCCeEEEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEE-ec--cCCCC-CceeEEEEEC
Q 007704 423 EMLDLDIGKWIRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTK-IA--NMNRR-RGCHSLAVLN 498 (592)
Q Consensus 423 ~~yD~~t~~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~-i~--~~p~~-R~~~s~v~~~ 498 (592)
++||+.|.+- +..++.+..+.+++.-++.+|+.-| .+.++.+|+++.+-.. +. ..+.+ +.--.+...+
T Consensus 88 ~v~D~~tl~~--~~ti~~~~~Gwglt~dg~~L~vSdg------s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~ 159 (243)
T 3mbr_X 88 FVYDLATLTP--RARFRYPGEGWALTSDDSHLYMSDG------TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVN 159 (243)
T ss_dssp EEEETTTTEE--EEEEECSSCCCEEEECSSCEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEET
T ss_pred EEEECCcCcE--EEEEeCCCCceEEeeCCCEEEEECC------CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeC
Confidence 9999988754 3334444466777766788999765 2579999999976533 22 22222 2222344559
Q ss_pred CEEEEEecCCCCCCCCeEEEEeCCCCe---EEEcCCCCC-------CC--cceEEEEE--CCEEEEEeccc
Q 007704 499 GKLYALGGFDGSAMVPSIEVYDPRLGS---WMSGEPMKL-------SR--GYLGAAVV--KEAIYVIGGVK 555 (592)
Q Consensus 499 ~~Lyv~GG~~~~~~~~~v~~yD~~t~~---W~~v~~lp~-------~R--~~~s~~v~--~~~Iyv~GG~~ 555 (592)
++||+--- ..++|.+.|+.+++ |..++.+.. +. ..-+.+.. .+++||.|=..
T Consensus 160 G~lyanvw-----~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~w 225 (243)
T 3mbr_X 160 GELLANVW-----LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRW 225 (243)
T ss_dssp TEEEEEET-----TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTC
T ss_pred CEEEEEEC-----CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCC
Confidence 99996532 24689999999976 444443321 11 22344444 47888887654
No 20
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.90 E-value=0.0067 Score=61.77 Aligned_cols=194 Identities=10% Similarity=-0.014 Sum_probs=118.5
Q ss_pred CcceEEEEECCEEEEEeeCCCCCCcceEEEEECCCCeE-EECCCCCCCCcceEEEE-ECCEEEEEecCCCCcccceEEEE
Q 007704 348 RSYASAAMLNGELYIFGGGDGNSWHNTVESYSPANDEW-TSRPSLNGTKGSLAGAT-IDNKIFAIGGGNGLECFSDVEML 425 (592)
Q Consensus 348 R~~~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W-~~l~~lp~~r~~~~~~~-~~~~Iyv~GG~~~~~~~~~v~~y 425 (592)
.....++..++++|+.... .+.+.++|+.+.+. ..++.... -+.++. .++++|+.... ...+.++
T Consensus 44 ~~~~~i~~~~~~lyv~~~~-----~~~v~viD~~t~~~~~~i~~~~~---p~~i~~~~~g~lyv~~~~-----~~~v~~i 110 (328)
T 3dsm_A 44 DVAQSMVIRDGIGWIVVNN-----SHVIFAIDINTFKEVGRITGFTS---PRYIHFLSDEKAYVTQIW-----DYRIFII 110 (328)
T ss_dssp SCEEEEEEETTEEEEEEGG-----GTEEEEEETTTCCEEEEEECCSS---EEEEEEEETTEEEEEEBS-----CSEEEEE
T ss_pred ccceEEEEECCEEEEEEcC-----CCEEEEEECcccEEEEEcCCCCC---CcEEEEeCCCeEEEEECC-----CCeEEEE
Confidence 3445666789999998763 25799999998876 34433222 233343 68899998742 3689999
Q ss_pred eCCCCeEEEcccccCc----ccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEe-ccCCCCCceeEEEEE-CC
Q 007704 426 DLDIGKWIRTRSMLQK----RFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKI-ANMNRRRGCHSLAVL-NG 499 (592)
Q Consensus 426 D~~t~~W~~i~~~p~~----R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i-~~~p~~R~~~s~v~~-~~ 499 (592)
|+.+++-...-+.... ..-..++..++++||..- ...+.+.++|+.+++.... +....+ +.++.- ++
T Consensus 111 D~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~----~~~~~v~viD~~t~~~~~~i~~g~~p---~~i~~~~dG 183 (328)
T 3dsm_A 111 NPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCW----SYQNRILKIDTETDKVVDELTIGIQP---TSLVMDKYN 183 (328)
T ss_dssp ETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEEC----TTCCEEEEEETTTTEEEEEEECSSCB---CCCEECTTS
T ss_pred ECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcC----CCCCEEEEEECCCCeEEEEEEcCCCc---cceEEcCCC
Confidence 9999875432111110 022334447999999852 1236799999999886543 221222 222322 68
Q ss_pred EEEEEecCCCCCC-----CCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecccCCCccccEEEEEcCC
Q 007704 500 KLYALGGFDGSAM-----VPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 500 ~Lyv~GG~~~~~~-----~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
++|+....+.... .+.++++|+.+.+....-..+.......++.- ++.+|+..+ .|++||++
T Consensus 184 ~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~---------~v~~~d~~ 252 (328)
T 3dsm_A 184 KMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN---------DIWRMPVE 252 (328)
T ss_dssp EEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS---------SEEEEETT
T ss_pred CEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc---------EEEEEECC
Confidence 8888753211111 36899999999876643233333333455555 467888644 58899986
No 21
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.75 E-value=0.0028 Score=64.65 Aligned_cols=198 Identities=10% Similarity=0.020 Sum_probs=115.3
Q ss_pred EEEE-ECCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCC----CcceEEEEECCEEEEEecCCCCcccceEEEEe
Q 007704 352 SAAM-LNGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGT----KGSLAGATIDNKIFAIGGGNGLECFSDVEMLD 426 (592)
Q Consensus 352 s~v~-~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~----r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD 426 (592)
.++. .++++|+.... -+.+.++|+.+.+....-+.... ..-..++..++++||..- ...+.+.++|
T Consensus 88 ~i~~~~~g~lyv~~~~-----~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~----~~~~~v~viD 158 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQIW-----DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCW----SYQNRILKID 158 (328)
T ss_dssp EEEEEETTEEEEEEBS-----CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEEC----TTCCEEEEEE
T ss_pred EEEEeCCCeEEEEECC-----CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcC----CCCCEEEEEE
Confidence 3444 58899998743 26799999999876432111110 022234447899999852 1235899999
Q ss_pred CCCCeEEEcccccCcccceEEEE-ECCEEEEEeccCCCCC-----CCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--C
Q 007704 427 LDIGKWIRTRSMLQKRFALAAAE-LNGVLYATGGYDGNEY-----MNSAERFDPREHYWTKIANMNRRRGCHSLAVL--N 498 (592)
Q Consensus 427 ~~t~~W~~i~~~p~~R~~~~a~~-~~g~IYV~GG~~~~~~-----~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~ 498 (592)
+.+++....-+.. ..-+.++. -++++|+....+.... ...++++|+.+++....-..+....-..++.- +
T Consensus 159 ~~t~~~~~~i~~g--~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~ 236 (328)
T 3dsm_A 159 TETDKVVDELTIG--IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTR 236 (328)
T ss_dssp TTTTEEEEEEECS--SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTS
T ss_pred CCCCeEEEEEEcC--CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCC
Confidence 9998865422111 11112222 3688888764221111 36899999999887644334433333344444 5
Q ss_pred CEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCC-CCcceEEEEE--CCEEEEEecccCCCccccEEEEEcCC
Q 007704 499 GKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKL-SRGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 499 ~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~-~R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+.||+..+ .++++|+.+.+.....-.+. .....++++- ++.|||....+- ...+.|.+||++
T Consensus 237 ~~lyv~~~--------~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y--~~~~~V~v~d~~ 301 (328)
T 3dsm_A 237 DTLYWINN--------DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDY--QQQGIVYRYSPQ 301 (328)
T ss_dssp CEEEEESS--------SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTS--SSEEEEEEECTT
T ss_pred CEEEEEcc--------EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEccccc--ccCCEEEEECCC
Confidence 67888743 68999998876532221222 2333455553 678999873211 113679999987
No 22
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.51 E-value=0.012 Score=58.64 Aligned_cols=184 Identities=14% Similarity=0.093 Sum_probs=117.2
Q ss_pred eEEEEECCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCC
Q 007704 351 ASAAMLNGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIG 430 (592)
Q Consensus 351 ~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~ 430 (592)
..+...++.||+-.|..+ -+.+.++|+.+++-..--+++.......++..+++||+.... .+.+++||+.|.
T Consensus 46 qGL~~~~~~LyestG~~g---~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~-----~~~v~v~D~~t~ 117 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG---RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK-----NGLGFVWNIRNL 117 (262)
T ss_dssp EEEEEETTEEEEEEEETT---EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS-----SSEEEEEETTTC
T ss_pred ceEEEECCEEEEECCCCC---CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee-----CCEEEEEECccC
Confidence 455555899999999654 246899999999875544455444555677889999999642 368999999987
Q ss_pred eEEEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEE-eccCCCCCc---eeEEEEECCEEEEEec
Q 007704 431 KWIRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTK-IANMNRRRG---CHSLAVLNGKLYALGG 506 (592)
Q Consensus 431 ~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~-i~~~p~~R~---~~s~v~~~~~Lyv~GG 506 (592)
+-. ..++.+-.+.+.+.-++.+|+.-| .+.++.+|+++.+-.. ++-...++. --.+...+++||+--
T Consensus 118 ~~~--~ti~~~~eG~glt~dg~~L~~SdG------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~- 188 (262)
T 3nol_A 118 RQV--RSFNYDGEGWGLTHNDQYLIMSDG------TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANV- 188 (262)
T ss_dssp CEE--EEEECSSCCCCEEECSSCEEECCS------SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEE-
T ss_pred cEE--EEEECCCCceEEecCCCEEEEECC------CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEE-
Confidence 643 333333466666666778888655 2579999999876433 322111111 112444589999642
Q ss_pred CCCCCCCCeEEEEeCCCCe---EEEcCCCCC--------CCcceEEEEE--CCEEEEEeccc
Q 007704 507 FDGSAMVPSIEVYDPRLGS---WMSGEPMKL--------SRGYLGAAVV--KEAIYVIGGVK 555 (592)
Q Consensus 507 ~~~~~~~~~v~~yD~~t~~---W~~v~~lp~--------~R~~~s~~v~--~~~Iyv~GG~~ 555 (592)
+ ..++|.+.|+.+++ |..++.+.. .....+.+.- .+++||.|-..
T Consensus 189 w----~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~W 246 (262)
T 3nol_A 189 W----QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLW 246 (262)
T ss_dssp T----TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTC
T ss_pred c----cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCC
Confidence 1 24689999999986 444443321 1122344544 47888887654
No 23
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.49 E-value=0.0093 Score=58.73 Aligned_cols=158 Identities=13% Similarity=0.122 Sum_probs=108.6
Q ss_pred EEEEECCEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCe
Q 007704 399 AGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHY 478 (592)
Q Consensus 399 ~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~ 478 (592)
.....++.+|+-.|..+ .+.+..+|+.|++=...-+++..-++.+++..+++||+....+ +.+++||+++.+
T Consensus 25 GL~~~~~~LyestG~~g---~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~-----~~v~v~D~~tl~ 96 (243)
T 3mbr_X 25 GLFYLRGHLYESTGETG---RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN-----HEGFVYDLATLT 96 (243)
T ss_dssp EEEEETTEEEEEECCTT---SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-----SEEEEEETTTTE
T ss_pred cEEEECCEEEEECCCCC---CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC-----CEEEEEECCcCc
Confidence 56667899999988544 3688999999998776666777678888899999999986543 689999999876
Q ss_pred EEEeccCCCCCceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCCeEEE-c--CCCCCC-CcceEEEEECCEEEEEecc
Q 007704 479 WTKIANMNRRRGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLGSWMS-G--EPMKLS-RGYLGAAVVKEAIYVIGGV 554 (592)
Q Consensus 479 W~~i~~~p~~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~-v--~~lp~~-R~~~s~~v~~~~Iyv~GG~ 554 (592)
-..- .+.+..+.+++.-+++||+.-| .+.++.+|+.+.+-.. + ..-+.+ +..-.+...+++||+---.
T Consensus 97 ~~~t--i~~~~~Gwglt~dg~~L~vSdg------s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~ 168 (243)
T 3mbr_X 97 PRAR--FRYPGEGWALTSDDSHLYMSDG------TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWL 168 (243)
T ss_dssp EEEE--EECSSCCCEEEECSSCEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETT
T ss_pred EEEE--EeCCCCceEEeeCCCEEEEECC------CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECC
Confidence 4332 2222345667666788999865 3579999999876433 2 222222 1122345568998854322
Q ss_pred cCCCccccEEEEEcCC----CcEEEccc
Q 007704 555 KNGSEIVDTVERFKEG----QGWEEINS 578 (592)
Q Consensus 555 ~~~~~~~~~v~~Yd~~----~~W~~v~~ 578 (592)
.++|.+.|+. -.|..+..
T Consensus 169 ------s~~I~vIDp~tG~V~~~idl~~ 190 (243)
T 3mbr_X 169 ------TSRIARIDPASGKVVAWIDLQA 190 (243)
T ss_dssp ------TTEEEEECTTTCBEEEEEECGG
T ss_pred ------CCeEEEEECCCCCEEEEEECCc
Confidence 2679999987 34666654
No 24
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.37 E-value=0.015 Score=57.96 Aligned_cols=152 Identities=14% Similarity=0.053 Sum_probs=101.5
Q ss_pred eEEEEECCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCC
Q 007704 351 ASAAMLNGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIG 430 (592)
Q Consensus 351 ~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~ 430 (592)
..+...++.||+..|..+ .+.++|+.+++-..-- ++.......++..+++||+.... .+.+++||+.|.
T Consensus 58 qGL~~~~~~Ly~stG~~g-----~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~-----~~~v~V~D~~Tl 126 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQG-----TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWT-----EGLLFTWSGMPP 126 (268)
T ss_dssp EEEEEETTEEEEEETTTT-----EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESS-----SCEEEEEETTTT
T ss_pred ceEEEECCEEEEEcCCCC-----EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEcc-----CCEEEEEECCcC
Confidence 455666899999999664 3899999998753322 44444445677789999998642 368999999987
Q ss_pred eEEEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEE-ec--cCCCCC-ceeEEEEECCEEEEEec
Q 007704 431 KWIRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTK-IA--NMNRRR-GCHSLAVLNGKLYALGG 506 (592)
Q Consensus 431 ~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~-i~--~~p~~R-~~~s~v~~~~~Lyv~GG 506 (592)
+-. ..++.+..+.+.+.-++.+|+.-| .+.++.+|+++.+-.. +. .-+.+. .--.+...+++||+--
T Consensus 127 ~~~--~ti~~~~eGwGLt~Dg~~L~vSdG------s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanv- 197 (268)
T 3nok_A 127 QRE--RTTRYSGEGWGLCYWNGKLVRSDG------GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANI- 197 (268)
T ss_dssp EEE--EEEECSSCCCCEEEETTEEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE-
T ss_pred cEE--EEEeCCCceeEEecCCCEEEEECC------CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEE-
Confidence 643 333334456677777889999865 2589999999976543 22 112111 1122344589988642
Q ss_pred CCCCCCCCeEEEEeCCCCeE
Q 007704 507 FDGSAMVPSIEVYDPRLGSW 526 (592)
Q Consensus 507 ~~~~~~~~~v~~yD~~t~~W 526 (592)
+ ..++|.+.|+.+++-
T Consensus 198 w----~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 198 W----HSSDVLEIDPATGTV 213 (268)
T ss_dssp T----TCSEEEEECTTTCBE
T ss_pred C----CCCeEEEEeCCCCcE
Confidence 2 246899999999863
No 25
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.30 E-value=0.01 Score=59.94 Aligned_cols=198 Identities=12% Similarity=0.109 Sum_probs=110.0
Q ss_pred CEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--C--CEEEEEecCCCCcccceEEEEeCCCCeEE
Q 007704 358 GELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--D--NKIFAIGGGNGLECFSDVEMLDLDIGKWI 433 (592)
Q Consensus 358 ~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~--~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~ 433 (592)
+.+++.|+.++ .+..||..+++|..+..+.........+.+ + +.+++.|+.+ ..+.+||..+..-.
T Consensus 69 ~~~l~s~~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~ 138 (379)
T 3jrp_A 69 GTILASCSYDG-----KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKENGTT 138 (379)
T ss_dssp CSEEEEEETTS-----CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCTTSCC
T ss_pred CCEEEEeccCC-----EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC-----CcEEEEecCCCCce
Confidence 67888888663 588899999988766544433333334444 3 6778887754 46788888766321
Q ss_pred EcccccC-cccceEEEEE--------------CCEEEEEeccCCCCCCCeeEEEeCCCC--eEEEeccCCCCCceeEEEE
Q 007704 434 RTRSMLQ-KRFALAAAEL--------------NGVLYATGGYDGNEYMNSAERFDPREH--YWTKIANMNRRRGCHSLAV 496 (592)
Q Consensus 434 ~i~~~p~-~R~~~~a~~~--------------~g~IYV~GG~~~~~~~~~v~~yD~~t~--~W~~i~~~p~~R~~~s~v~ 496 (592)
..-.+.. ...-.+++.. ++.+++.|+.++ .+.+||+.+. .|..+..+.........+.
T Consensus 139 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~ 213 (379)
T 3jrp_A 139 SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVA 213 (379)
T ss_dssp CEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEEE
T ss_pred eeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC-----eEEEEEecCCCcceeeEEEEecccCcEeEEE
Confidence 1101111 1111122222 467778887653 5778887544 3655544433222223333
Q ss_pred E--C---CEEEEEecCCCCCCCCeEEEEeCCCCe----EEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEE
Q 007704 497 L--N---GKLYALGGFDGSAMVPSIEVYDPRLGS----WMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVER 566 (592)
Q Consensus 497 ~--~---~~Lyv~GG~~~~~~~~~v~~yD~~t~~----W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~ 566 (592)
+ + +.+++.|+.++ .+.+||..+.. ..............+++.. ++..+++|+.++ .|.+
T Consensus 214 ~sp~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg------~i~i 282 (379)
T 3jrp_A 214 WSPTVLLRSYLASVSQDR-----TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN------KVTL 282 (379)
T ss_dssp ECCCCSSSEEEEEEETTS-----CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSS------SEEE
T ss_pred ECCCCCCCCeEEEEeCCC-----EEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCC------cEEE
Confidence 3 4 78888888764 47778877652 2222222222222233332 566777777643 3777
Q ss_pred EcCC--CcEEEccccCC
Q 007704 567 FKEG--QGWEEINSRAI 581 (592)
Q Consensus 567 Yd~~--~~W~~v~~~p~ 581 (592)
||.. ..|..+.....
T Consensus 283 w~~~~~~~~~~~~~~~~ 299 (379)
T 3jrp_A 283 WKENLEGKWEPAGEVHQ 299 (379)
T ss_dssp EEEEETTEEEEEEEEC-
T ss_pred EeCCCCCccccccceec
Confidence 7765 78887765443
No 26
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.18 E-value=0.073 Score=53.03 Aligned_cols=192 Identities=14% Similarity=0.117 Sum_probs=118.0
Q ss_pred eEEEEEC-CEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCC
Q 007704 351 ASAAMLN-GELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDI 429 (592)
Q Consensus 351 ~s~v~~~-~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t 429 (592)
+.++..+ +.+|+..|..+ -+.+.++|+.+++-...-+++.......++..+++||+..- ..+.+++||+.|
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~-----~~~~v~viD~~t 95 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG---RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVW-----LKNIGFIYDRRT 95 (266)
T ss_dssp EEEEECSTTEEEEEECSTT---TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEET-----TCSEEEEEETTT
T ss_pred ccEEEeCCCeEEEECCCCC---CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEe-----cCCEEEEEECCC
Confidence 5555555 89999887432 25799999999987554334433344566777899999964 236899999997
Q ss_pred CeEEEcccccCc-ccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEE-Eec--cCCCCC-ceeEEEEECCEEEEE
Q 007704 430 GKWIRTRSMLQK-RFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWT-KIA--NMNRRR-GCHSLAVLNGKLYAL 504 (592)
Q Consensus 430 ~~W~~i~~~p~~-R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~-~i~--~~p~~R-~~~s~v~~~~~Lyv~ 504 (592)
.+= +..++.+ ..+...+.-++++|+..| .+.+..+|+++.+-. .++ ..+.+. .-..+...+++||+-
T Consensus 96 ~~v--~~~i~~g~~~g~glt~Dg~~l~vs~g------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn 167 (266)
T 2iwa_A 96 LSN--IKNFTHQMKDGWGLATDGKILYGSDG------TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWAN 167 (266)
T ss_dssp TEE--EEEEECCSSSCCEEEECSSSEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred CcE--EEEEECCCCCeEEEEECCCEEEEECC------CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEe
Confidence 753 3333322 344455555677898754 368999999987643 332 111111 122334448899876
Q ss_pred ecCCCCCCCCeEEEEeCCCCe---EEEcCCC---------CCCCcceEEEEE--CCEEEEEecccCCCccccEEEEEcC
Q 007704 505 GGFDGSAMVPSIEVYDPRLGS---WMSGEPM---------KLSRGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERFKE 569 (592)
Q Consensus 505 GG~~~~~~~~~v~~yD~~t~~---W~~v~~l---------p~~R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd~ 569 (592)
-. ..++|.+.|+.+++ |..++.+ +..-...+++.- ++++||.|+.. +.|++.+.
T Consensus 168 ~~-----~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~------~~v~~i~l 235 (266)
T 2iwa_A 168 IW-----QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW------PKLFEIKL 235 (266)
T ss_dssp ET-----TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC------SEEEEEEE
T ss_pred cC-----CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC------CeEEEEEE
Confidence 43 24689999999875 3333311 011122445555 46899998865 44666664
No 27
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.17 E-value=0.031 Score=56.29 Aligned_cols=188 Identities=11% Similarity=0.158 Sum_probs=106.2
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--C--CEEEEEecCCCCcccceEEEEeCCCCeE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--D--NKIFAIGGGNGLECFSDVEMLDLDIGKW 432 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~--~~Iyv~GG~~~~~~~~~v~~yD~~t~~W 432 (592)
++..++.|+.++ .+..||.....+..+..+........++.+ + +.+++.|+.+ ..+.+||..+++|
T Consensus 22 ~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~ 91 (379)
T 3jrp_A 22 YGKRLATCSSDK-----TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENGRW 91 (379)
T ss_dssp SSSEEEEEETTS-----CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SCEEEEEEETTEE
T ss_pred CCCEEEEEECCC-----cEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC-----CEEEEEEcCCCce
Confidence 567778887663 477888776677665444433333333444 2 6788888765 3688999999988
Q ss_pred EEcccccCcccceEEEEE--C--CEEEEEeccCCCCCCCeeEEEeCCCCeE-EEeccCCCCCceeEEEEE----------
Q 007704 433 IRTRSMLQKRFALAAAEL--N--GVLYATGGYDGNEYMNSAERFDPREHYW-TKIANMNRRRGCHSLAVL---------- 497 (592)
Q Consensus 433 ~~i~~~p~~R~~~~a~~~--~--g~IYV~GG~~~~~~~~~v~~yD~~t~~W-~~i~~~p~~R~~~s~v~~---------- 497 (592)
..+..+.........+.+ + +.+++.|+.+ ..+.+||+.+..- .............++...
T Consensus 92 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 166 (379)
T 3jrp_A 92 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 166 (379)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-------
T ss_pred eEeeeecCCCcceEEEEeCCCCCCCEEEEecCC-----CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccc
Confidence 776554432222233333 3 5677777755 4678888877632 111100111111222222
Q ss_pred ----CCEEEEEecCCCCCCCCeEEEEeCCC--CeEEEcCCCCCCCcceEEEEE--C---CEEEEEecccCCCccccEEEE
Q 007704 498 ----NGKLYALGGFDGSAMVPSIEVYDPRL--GSWMSGEPMKLSRGYLGAAVV--K---EAIYVIGGVKNGSEIVDTVER 566 (592)
Q Consensus 498 ----~~~Lyv~GG~~~~~~~~~v~~yD~~t--~~W~~v~~lp~~R~~~s~~v~--~---~~Iyv~GG~~~~~~~~~~v~~ 566 (592)
++.+++.|+.++ .+.+||..+ ..|..+..+.........+.+ + +.+++.|+.++. +.+
T Consensus 167 ~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~------i~i 235 (379)
T 3jrp_A 167 NGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT------CII 235 (379)
T ss_dssp ---CTTCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC------EEE
T ss_pred cCCCCCCEEEEEeCCC-----eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCE------EEE
Confidence 367888888664 477777654 345554433322222333333 3 678888886543 777
Q ss_pred EcCC
Q 007704 567 FKEG 570 (592)
Q Consensus 567 Yd~~ 570 (592)
||..
T Consensus 236 wd~~ 239 (379)
T 3jrp_A 236 WTQD 239 (379)
T ss_dssp EEES
T ss_pred EeCC
Confidence 7765
No 28
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.14 E-value=0.0072 Score=61.98 Aligned_cols=179 Identities=15% Similarity=0.168 Sum_probs=99.8
Q ss_pred CEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE-CC-EEEEEecCCCCcccceEEEEeCCCCeEEEc
Q 007704 358 GELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI-DN-KIFAIGGGNGLECFSDVEMLDLDIGKWIRT 435 (592)
Q Consensus 358 ~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~-~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i 435 (592)
+.+|+.|+.+ +.+.+||..+++....-... ..-.+++.. ++ .||+.|+.+ ..+.+||+.+++....
T Consensus 2 ~~l~vs~~~d-----~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~d-----~~i~v~d~~~~~~~~~ 69 (391)
T 1l0q_A 2 TFAYIANSES-----DNISVIDVTSNKVTATIPVG--SNPMGAVISPDGTKVYVANAHS-----NDVSIIDTATNNVIAT 69 (391)
T ss_dssp EEEEEEETTT-----TEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEEGGG-----TEEEEEETTTTEEEEE
T ss_pred CEEEEEcCCC-----CEEEEEECCCCeEEEEeecC--CCcceEEECCCCCEEEEECCCC-----CeEEEEECCCCeEEEE
Confidence 3567777655 46899999988664431111 112223322 44 577776533 5789999998876543
Q ss_pred ccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-C-CEEEEEecCCCCC
Q 007704 436 RSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-N-GKLYALGGFDGSA 511 (592)
Q Consensus 436 ~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~-~~Lyv~GG~~~~~ 511 (592)
-.... .-.+++.. +..||+.|..+ ..+.+||+.++.....-... ....+++.. + ..||+.++.+
T Consensus 70 ~~~~~--~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~--- 137 (391)
T 1l0q_A 70 VPAGS--SPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSNTVAGTVKTG--KSPLGLALSPDGKKLYVTNNGD--- 137 (391)
T ss_dssp EECSS--SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEETTT---
T ss_pred EECCC--CccceEECCCCCEEEEEECCC-----CEEEEEECCCCeEEEEEeCC--CCcceEEECCCCCEEEEEeCCC---
Confidence 22222 22223332 44566665432 56899999988765442222 222333333 3 4577776643
Q ss_pred CCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-C-CEEEEEecccCCCccccEEEEEcCC
Q 007704 512 MVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-K-EAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 512 ~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~-~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
..+.+||+.+.+....-.. ......++.. + ..+|+.++.+ ..|.+||+.
T Consensus 138 --~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~dg~~l~~~~~~~------~~v~~~d~~ 188 (391)
T 1l0q_A 138 --KTVSVINTVTKAVINTVSV--GRSPKGIAVTPDGTKVYVANFDS------MSISVIDTV 188 (391)
T ss_dssp --TEEEEEETTTTEEEEEEEC--CSSEEEEEECTTSSEEEEEETTT------TEEEEEETT
T ss_pred --CEEEEEECCCCcEEEEEec--CCCcceEEECCCCCEEEEEeCCC------CEEEEEECC
Confidence 4799999988876543221 2222333333 3 3566666543 458888876
No 29
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.04 E-value=0.26 Score=47.71 Aligned_cols=188 Identities=11% Similarity=0.046 Sum_probs=101.7
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE-CCEEEEEecCCCCcccceEEEEeCCCCeEEEc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI-DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRT 435 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i 435 (592)
++.||+....+ +.+.+||+. ++............-++++.. ++.+|+.... ...+.+||+. +++...
T Consensus 30 ~g~l~v~~~~~-----~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~v~~~d~~-g~~~~~ 97 (300)
T 2qc5_A 30 DGKVWFTQHKA-----NKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENG-----ANKIGKLSKK-GGFTEY 97 (300)
T ss_dssp TSCEEEEETTT-----TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEE
T ss_pred CCCEEEEcCCC-----CeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecC-----CCeEEEECCC-CCeEEe
Confidence 67888865422 468899988 666654221111122233332 5788887532 2468899998 666544
Q ss_pred ccccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCEEEEEecCCCCCCC
Q 007704 436 RSMLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGKLYALGGFDGSAMV 513 (592)
Q Consensus 436 ~~~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~~~~~~ 513 (592)
........-+.++.. ++.+|+.... ...+.+||+. +..............+.++.- +++||+.... .
T Consensus 98 ~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~-----~ 166 (300)
T 2qc5_A 98 PLPQPDSGPYGITEGLNGDIWFTQLN-----GDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQ-----N 166 (300)
T ss_dssp ECSSTTCCEEEEEECSTTCEEEEETT-----TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETT-----T
T ss_pred cCCCCCCCCccceECCCCCEEEEccC-----CCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecC-----C
Confidence 211111222233332 6788887532 2468899998 666544311112222333333 5778886532 2
Q ss_pred CeEEEEeCCCCeEEEcCCCCCC-CcceEEEEE-CCEEEEEecccCCCccccEEEEEcCCCcEEE
Q 007704 514 PSIEVYDPRLGSWMSGEPMKLS-RGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEGQGWEE 575 (592)
Q Consensus 514 ~~v~~yD~~t~~W~~v~~lp~~-R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~~~W~~ 575 (592)
..+++||+ +.++.... ++.. .....++.- ++.+|+..... +.|.+||+...+..
T Consensus 167 ~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~------~~i~~~~~~g~~~~ 222 (300)
T 2qc5_A 167 NSIGRITN-TGKLEEYP-LPTNAAAPVGITSGNDGALWFVEIMG------NKIGRITTTGEISE 222 (300)
T ss_dssp TEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEETTT------TEEEEECTTCCEEE
T ss_pred CeEEEECC-CCcEEEee-CCCCCCCcceEEECCCCCEEEEccCC------CEEEEEcCCCcEEE
Confidence 46899998 66666543 2222 122233332 56788754321 45888888644443
No 30
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.01 E-value=0.15 Score=52.20 Aligned_cols=174 Identities=13% Similarity=0.165 Sum_probs=99.3
Q ss_pred EEEEECCEEEEEeeCCCCCCcceEEEEECCCC--eEEECCCCC-------CCCcceEEEEECCEEEEEecCCCCcccceE
Q 007704 352 SAAMLNGELYIFGGGDGNSWHNTVESYSPAND--EWTSRPSLN-------GTKGSLAGATIDNKIFAIGGGNGLECFSDV 422 (592)
Q Consensus 352 s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~--~W~~l~~lp-------~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v 422 (592)
+.++.++.||+.... ..+++||..++ .|+.-.... ........+..++.||+... ...+
T Consensus 48 ~p~v~~~~v~~~~~~------g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------~g~l 115 (376)
T 3q7m_A 48 HPALADNVVYAADRA------GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE------KAQV 115 (376)
T ss_dssp CCEEETTEEEEECTT------SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET------TSEE
T ss_pred ccEEECCEEEEEcCC------CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC------CCEE
Confidence 556679999987542 36999999876 476532211 12223344556888888643 2479
Q ss_pred EEEeCCCCe--EEEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCe--EEEeccCCC--CCceeEEEE
Q 007704 423 EMLDLDIGK--WIRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHY--WTKIANMNR--RRGCHSLAV 496 (592)
Q Consensus 423 ~~yD~~t~~--W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~--W~~i~~~p~--~R~~~s~v~ 496 (592)
+.+|..+++ |+.-.. .. .....+..++.+|+..+ ...++.||+.+++ |+.-...+. .+...+.+.
T Consensus 116 ~a~d~~tG~~~W~~~~~--~~-~~~~p~~~~~~v~v~~~------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~ 186 (376)
T 3q7m_A 116 YALNTSDGTVAWQTKVA--GE-ALSRPVVSDGLVLIHTS------NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT 186 (376)
T ss_dssp EEEETTTCCEEEEEECS--SC-CCSCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCC-----CCCCCCEE
T ss_pred EEEECCCCCEEEEEeCC--Cc-eEcCCEEECCEEEEEcC------CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE
Confidence 999998775 754321 11 12223456888888543 1468999998775 876543221 122233445
Q ss_pred ECCEEEEEecCCCCCCCCeEEEEeCCCC--eEEEcCCCCCCC--------cceEEEEECCEEEEEe
Q 007704 497 LNGKLYALGGFDGSAMVPSIEVYDPRLG--SWMSGEPMKLSR--------GYLGAAVVKEAIYVIG 552 (592)
Q Consensus 497 ~~~~Lyv~GG~~~~~~~~~v~~yD~~t~--~W~~v~~lp~~R--------~~~s~~v~~~~Iyv~G 552 (592)
.++.||+ |..+ ..+..||+.+. .|+.-...+... .....++.++.+|+.+
T Consensus 187 ~~~~v~~-g~~~-----g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~ 246 (376)
T 3q7m_A 187 AFGAAVV-GGDN-----GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALA 246 (376)
T ss_dssp ETTEEEE-CCTT-----TEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEEC
T ss_pred ECCEEEE-EcCC-----CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEe
Confidence 5787776 3322 36889998765 477643222111 1123345567777644
No 31
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.00 E-value=0.028 Score=55.83 Aligned_cols=157 Identities=13% Similarity=0.080 Sum_probs=103.2
Q ss_pred EEEEECCEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCe
Q 007704 399 AGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHY 478 (592)
Q Consensus 399 ~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~ 478 (592)
.....++.+|+-.|..+ .+.+..+|+.|++=...-+++..-++...+..+++||+....+ +.+++||+++.+
T Consensus 47 GL~~~~~~LyestG~~g---~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~-----~~v~v~D~~t~~ 118 (262)
T 3nol_A 47 GFFYRNGYFYESTGLNG---RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN-----GLGFVWNIRNLR 118 (262)
T ss_dssp EEEEETTEEEEEEEETT---EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-----SEEEEEETTTCC
T ss_pred eEEEECCEEEEECCCCC---CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC-----CEEEEEECccCc
Confidence 34445889999988543 3578999999998765555665557777888999999996543 689999999876
Q ss_pred EEE-eccCCCCCceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCCeEEE-cCC--CCCCCcc-eEEEEECCEEEEEec
Q 007704 479 WTK-IANMNRRRGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLGSWMS-GEP--MKLSRGY-LGAAVVKEAIYVIGG 553 (592)
Q Consensus 479 W~~-i~~~p~~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~-v~~--lp~~R~~-~s~~v~~~~Iyv~GG 553 (592)
-.. ++- +-.+.+++.-+++||+.-| .+.++.+|+.+.+-.. +.- -..+... -.+...+++||+---
T Consensus 119 ~~~ti~~---~~eG~glt~dg~~L~~SdG------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w 189 (262)
T 3nol_A 119 QVRSFNY---DGEGWGLTHNDQYLIMSDG------TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVW 189 (262)
T ss_dssp EEEEEEC---SSCCCCEEECSSCEEECCS------SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEET
T ss_pred EEEEEEC---CCCceEEecCCCEEEEECC------CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEc
Confidence 533 332 2244556655778888755 3579999999865433 221 1111111 124455899886332
Q ss_pred ccCCCccccEEEEEcCC----CcEEEccc
Q 007704 554 VKNGSEIVDTVERFKEG----QGWEEINS 578 (592)
Q Consensus 554 ~~~~~~~~~~v~~Yd~~----~~W~~v~~ 578 (592)
. .++|.+.|++ -.|..++.
T Consensus 190 ~------~~~I~vIDp~tG~V~~~Id~~~ 212 (262)
T 3nol_A 190 Q------TNKIVRIDPETGKVTGIIDLNG 212 (262)
T ss_dssp T------SSEEEEECTTTCBEEEEEECTT
T ss_pred c------CCeEEEEECCCCcEEEEEECCc
Confidence 1 2689999987 34666543
No 32
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.98 E-value=0.017 Score=59.07 Aligned_cols=182 Identities=18% Similarity=0.167 Sum_probs=98.3
Q ss_pred CEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE-CC-EEEEEecCCCCcccceEEEEeCCCCeEEEc
Q 007704 358 GELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI-DN-KIFAIGGGNGLECFSDVEMLDLDIGKWIRT 435 (592)
Q Consensus 358 ~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~-~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i 435 (592)
..||+.|+.+ ..+..||..+++....-..+. .-.+++.. ++ .||+.|..+ ..+.+||+.+++....
T Consensus 44 ~~l~~~~~~d-----~~i~v~d~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~~~~~~ 111 (391)
T 1l0q_A 44 TKVYVANAHS-----NDVSIIDTATNNVIATVPAGS--SPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSNTVAGT 111 (391)
T ss_dssp SEEEEEEGGG-----TEEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEE
T ss_pred CEEEEECCCC-----CeEEEEECCCCeEEEEEECCC--CccceEECCCCCEEEEEECCC-----CEEEEEECCCCeEEEE
Confidence 4566776544 478999999887654322222 22223222 44 466665432 5799999998876443
Q ss_pred ccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCEEEEEecCCCCC
Q 007704 436 RSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGKLYALGGFDGSA 511 (592)
Q Consensus 436 ~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~Lyv~GG~~~~~ 511 (592)
-.. ...-..++.. +..+|+.++.+ ..+.+||+.++.....-... .....++.. +..||+.++.+
T Consensus 112 ~~~--~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~dg~~l~~~~~~~--- 179 (391)
T 1l0q_A 112 VKT--GKSPLGLALSPDGKKLYVTNNGD-----KTVSVINTVTKAVINTVSVG--RSPKGIAVTPDGTKVYVANFDS--- 179 (391)
T ss_dssp EEC--SSSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECC--SSEEEEEECTTSSEEEEEETTT---
T ss_pred EeC--CCCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCCcEEEEEecC--CCcceEEECCCCCEEEEEeCCC---
Confidence 221 1122233332 34677777544 47899999988765443222 122233333 34677776543
Q ss_pred CCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 512 MVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 512 ~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
..+.+||+.+......-. ......+++.. ++..+++++... ....|.+||+.
T Consensus 180 --~~v~~~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~---~~~~v~~~d~~ 232 (391)
T 1l0q_A 180 --MSISVIDTVTNSVIDTVK--VEAAPSGIAVNPEGTKAYVTNVDK---YFNTVSMIDTG 232 (391)
T ss_dssp --TEEEEEETTTTEEEEEEE--CSSEEEEEEECTTSSEEEEEEECS---SCCEEEEEETT
T ss_pred --CEEEEEECCCCeEEEEEe--cCCCccceEECCCCCEEEEEecCc---CCCcEEEEECC
Confidence 469999998876554322 12222223332 344333344211 12568899976
No 33
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.82 E-value=0.28 Score=50.06 Aligned_cols=188 Identities=16% Similarity=0.227 Sum_probs=110.2
Q ss_pred ceEEEEECCEEEEEeeCCCCCCcceEEEEECCCCe--EEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeC
Q 007704 350 YASAAMLNGELYIFGGGDGNSWHNTVESYSPANDE--WTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDL 427 (592)
Q Consensus 350 ~~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~--W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~ 427 (592)
..+.+..++.||+... + ..++.+|..+++ |+.-.. .. .....+..++.||+..+ ...++.||+
T Consensus 96 ~~~~~~~~~~v~v~~~-~-----g~l~a~d~~tG~~~W~~~~~--~~-~~~~p~~~~~~v~v~~~------~g~l~~~d~ 160 (376)
T 3q7m_A 96 SGGVTVSGGHVYIGSE-K-----AQVYALNTSDGTVAWQTKVA--GE-ALSRPVVSDGLVLIHTS------NGQLQALNE 160 (376)
T ss_dssp EEEEEEETTEEEEEET-T-----SEEEEEETTTCCEEEEEECS--SC-CCSCCEEETTEEEEECT------TSEEEEEET
T ss_pred ccCceEeCCEEEEEcC-C-----CEEEEEECCCCCEEEEEeCC--Cc-eEcCCEEECCEEEEEcC------CCeEEEEEC
Confidence 3445566888888543 2 469999998764 755321 11 11223445788887543 247899999
Q ss_pred CCCe--EEEcccccC--cccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCe--EEEeccCCCCC--------ceeE
Q 007704 428 DIGK--WIRTRSMLQ--KRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHY--WTKIANMNRRR--------GCHS 493 (592)
Q Consensus 428 ~t~~--W~~i~~~p~--~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~--W~~i~~~p~~R--------~~~s 493 (592)
.+++ |+.-...+. .+...+.+..++.+|+. ..+ ..+..||+.++. |+.-...+... ....
T Consensus 161 ~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g-~~~-----g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~ 234 (376)
T 3q7m_A 161 ADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVG-GDN-----GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTT 234 (376)
T ss_dssp TTCCEEEEEECCC-----CCCCCCEEETTEEEEC-CTT-----TEEEEEETTTCCEEEEEECCC-----------CCCCC
T ss_pred CCCcEEEEEeCCCCceeecCCCCcEEECCEEEEE-cCC-----CEEEEEECCCCcEEEEEecccCCCCcccccccccCCC
Confidence 8875 875432211 12223345558887773 221 468999998764 87653322211 1223
Q ss_pred EEEECCEEEEEecCCCCCCCCeEEEEeCCCC--eEEEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEEEEEcCC-
Q 007704 494 LAVLNGKLYALGGFDGSAMVPSIEVYDPRLG--SWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG- 570 (592)
Q Consensus 494 ~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~--~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~- 570 (592)
.+..++.||+.+. + ..+..+|+.+. .|+.-.. ...+.++.++.||+.... ..+++||+.
T Consensus 235 p~~~~~~v~~~~~-~-----g~l~~~d~~tG~~~w~~~~~-----~~~~~~~~~~~l~~~~~~-------g~l~~~d~~t 296 (376)
T 3q7m_A 235 PVVVNGVVFALAY-N-----GNLTALDLRSGQIMWKRELG-----SVNDFIVDGNRIYLVDQN-------DRVMALTIDG 296 (376)
T ss_dssp CEEETTEEEEECT-T-----SCEEEEETTTCCEEEEECCC-----CEEEEEEETTEEEEEETT-------CCEEEEETTT
T ss_pred cEEECCEEEEEec-C-----cEEEEEECCCCcEEeeccCC-----CCCCceEECCEEEEEcCC-------CeEEEEECCC
Confidence 3455888887642 1 35889998776 5775321 133456668889886542 348999976
Q ss_pred --CcEEEc
Q 007704 571 --QGWEEI 576 (592)
Q Consensus 571 --~~W~~v 576 (592)
..|+.-
T Consensus 297 G~~~w~~~ 304 (376)
T 3q7m_A 297 GVTLWTQS 304 (376)
T ss_dssp CCEEEEEC
T ss_pred CcEEEeec
Confidence 458764
No 34
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.81 E-value=0.029 Score=56.55 Aligned_cols=146 Identities=17% Similarity=0.227 Sum_probs=82.9
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
+++++++|+.+ ..+..||..+.+|..+..+.........+.+ ++++++.|+.+ ..+.+||..++++..
T Consensus 19 ~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 19 DRTQIAICPNN-----HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD-----RNAYVWTLKGRTWKP 88 (372)
T ss_dssp TSSEEEEECSS-----SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT-----SCEEEEEEETTEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC-----CeEEEEECCCCeeee
Confidence 66777787755 4688999999877665444433333223322 67777888754 368889998888765
Q ss_pred cccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCe-EEEeccC--CCCCceeEEEEE-CCEEEEEecCC
Q 007704 435 TRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHY-WTKIANM--NRRRGCHSLAVL-NGKLYALGGFD 508 (592)
Q Consensus 435 i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~-W~~i~~~--p~~R~~~s~v~~-~~~Lyv~GG~~ 508 (592)
...+.........+.+ ++.+++.|+.+ ..+.+||+.+.. |...... +......++... ++.+++.|+.+
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGSGS-----RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETT-----SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCC-----CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 4332222222222222 56677777654 346666665543 4333222 112222233333 67778888765
Q ss_pred CCCCCCeEEEEeCC
Q 007704 509 GSAMVPSIEVYDPR 522 (592)
Q Consensus 509 ~~~~~~~v~~yD~~ 522 (592)
+ .+.+||..
T Consensus 164 g-----~i~~~d~~ 172 (372)
T 1k8k_C 164 F-----KCRIFSAY 172 (372)
T ss_dssp S-----CEEEEECC
T ss_pred C-----CEEEEEcc
Confidence 3 47788854
No 35
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.80 E-value=0.06 Score=56.39 Aligned_cols=186 Identities=17% Similarity=0.239 Sum_probs=105.9
Q ss_pred EEEECCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeE
Q 007704 353 AAMLNGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKW 432 (592)
Q Consensus 353 ~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W 432 (592)
++..++..++.|+.+ ..+.+||..+.+-... +........++..++.+++.|+.+ ..+.+||..+++-
T Consensus 138 ~~~~d~~~l~~g~~d-----g~i~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~sg~~d-----g~i~vwd~~~~~~ 205 (435)
T 1p22_A 138 CLQYDDQKIVSGLRD-----NTIKIWDKNTLECKRI--LTGHTGSVLCLQYDERVIITGSSD-----STVRVWDVNTGEM 205 (435)
T ss_dssp EEECCSSEEEEEESS-----SCEEEEESSSCCEEEE--ECCCSSCEEEEECCSSEEEEEETT-----SCEEEEESSSCCE
T ss_pred EEEECCCEEEEEeCC-----CeEEEEeCCCCeEEEE--EcCCCCcEEEEEECCCEEEEEcCC-----CeEEEEECCCCcE
Confidence 344588888888876 3688899887654332 222223334445588888888865 4688999988764
Q ss_pred EEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEe-ccCCCCCceeEEEEECCEEEEEecCCCCC
Q 007704 433 IRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKI-ANMNRRRGCHSLAVLNGKLYALGGFDGSA 511 (592)
Q Consensus 433 ~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i-~~~p~~R~~~s~v~~~~~Lyv~GG~~~~~ 511 (592)
... +........+...++..++.|+.+ ..+.+||+.+..-... ............+..++..++.|+.+
T Consensus 206 ~~~--~~~h~~~v~~l~~~~~~l~s~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d--- 275 (435)
T 1p22_A 206 LNT--LIHHCEAVLHLRFNNGMMVTCSKD-----RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD--- 275 (435)
T ss_dssp EEE--ECCCCSCEEEEECCTTEEEEEETT-----SCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETT---
T ss_pred EEE--EcCCCCcEEEEEEcCCEEEEeeCC-----CcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCC---
Confidence 322 221122222333455567777765 3578888876542211 11111122223344466677777755
Q ss_pred CCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEEEEEcCC
Q 007704 512 MVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 512 ~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
..+.+||..+..-... +........+...++..++.|+.++ .|.+||..
T Consensus 276 --g~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~g~~dg------~i~iwd~~ 324 (435)
T 1p22_A 276 --RTIKVWNTSTCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDN------TIRLWDIE 324 (435)
T ss_dssp --SEEEEEETTTCCEEEE--EECCSSCEEEEEEETTEEEEEETTS------CEEEEETT
T ss_pred --CeEEEEECCcCcEEEE--EcCCCCcEEEEEeCCCEEEEEeCCC------eEEEEECC
Confidence 3688999887653321 1111222333444666777777653 48888875
No 36
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.78 E-value=0.045 Score=55.68 Aligned_cols=180 Identities=13% Similarity=0.204 Sum_probs=99.9
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCC-CCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLN-GTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWI 433 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp-~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~ 433 (592)
++++++.||.++ .+..||..++.|.....+. ........+.+ +++.++.|+.++ .+.++|..+..+.
T Consensus 27 ~g~~las~~~D~-----~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~-----~v~iw~~~~~~~~ 96 (345)
T 3fm0_A 27 AGTLLASCGGDR-----RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA-----TTCIWKKNQDDFE 96 (345)
T ss_dssp TSSCEEEEETTS-----CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECCC-EE
T ss_pred CCCEEEEEcCCC-----eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC-----cEEEEEccCCCeE
Confidence 678888888763 5778888888775432221 11122223333 677888887653 5677888777765
Q ss_pred EcccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCC-eEEEeccCCCCCceeEEEEE--CCEEEEEecCC
Q 007704 434 RTRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREH-YWTKIANMNRRRGCHSLAVL--NGKLYALGGFD 508 (592)
Q Consensus 434 ~i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~-~W~~i~~~p~~R~~~s~v~~--~~~Lyv~GG~~ 508 (592)
.+..+..-...-..+.+ ++.+++.|+.+ ..+.+||+.+. .+..+..+.........+.+ ++.+++.|+.+
T Consensus 97 ~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d 171 (345)
T 3fm0_A 97 CVTTLEGHENEVKSVAWAPSGNLLATCSRD-----KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD 171 (345)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETT
T ss_pred EEEEccCCCCCceEEEEeCCCCEEEEEECC-----CeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCC
Confidence 54433321111222222 56777788765 35778887654 33333322222222223333 67788888866
Q ss_pred CCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecccC
Q 007704 509 GSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV--KEAIYVIGGVKN 556 (592)
Q Consensus 509 ~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~--~~~Iyv~GG~~~ 556 (592)
+ .+.+||..+..|..+..+.........+.+ ++..++.|+.++
T Consensus 172 ~-----~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 172 D-----TVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp S-----CEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred C-----cEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC
Confidence 4 478888888888755433322222222333 466777777653
No 37
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.77 E-value=0.05 Score=56.88 Aligned_cols=145 Identities=15% Similarity=0.225 Sum_probs=79.8
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
++.+++.||.++ .+.+||..+.+.... +......-..+.+ ++++++.||.++ .+.+||+.+.+-..
T Consensus 119 ~~~~l~s~s~Dg-----~i~vwd~~~~~~~~~--l~~h~~~V~~v~~~~~~~~l~sgs~D~-----~i~iwd~~~~~~~~ 186 (410)
T 1vyh_C 119 VFSVMVSASEDA-----TIKVWDYETGDFERT--LKGHTDSVQDISFDHSGKLLASCSADM-----TIKLWDFQGFECIR 186 (410)
T ss_dssp SSSEEEEEESSS-----CEEEEETTTCCCCEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----CCCEEETTSSCEEE
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCcEEEE--EeccCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCceeE
Confidence 567888888763 578889887654221 1111111222233 677888888663 46678887654322
Q ss_pred cccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCEEEEEecCCCC
Q 007704 435 TRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGKLYALGGFDGS 510 (592)
Q Consensus 435 i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~Lyv~GG~~~~ 510 (592)
.+..-...-.++.+ ++..++.|+.+ ..+.+||+.++.-...- .........+.. ++.+++.|+.++
T Consensus 187 --~~~~h~~~V~~v~~~p~~~~l~s~s~D-----~~i~~wd~~~~~~~~~~--~~h~~~v~~~~~~~~g~~l~s~s~D~- 256 (410)
T 1vyh_C 187 --TMHGHDHNVSSVSIMPNGDHIVSASRD-----KTIKMWEVQTGYCVKTF--TGHREWVRMVRPNQDGTLIASCSNDQ- 256 (410)
T ss_dssp --CCCCCSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCEEEEE--ECCSSCEEEEEECTTSSEEEEEETTS-
T ss_pred --EEcCCCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEEE--eCCCccEEEEEECCCCCEEEEEcCCC-
Confidence 22211111122222 56667777765 46888999887543221 111111222333 677888888654
Q ss_pred CCCCeEEEEeCCCCeEE
Q 007704 511 AMVPSIEVYDPRLGSWM 527 (592)
Q Consensus 511 ~~~~~v~~yD~~t~~W~ 527 (592)
.+.+||..+....
T Consensus 257 ----~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 257 ----TVRVWVVATKECK 269 (410)
T ss_dssp ----CEEEEETTTCCEE
T ss_pred ----eEEEEECCCCcee
Confidence 4778888776543
No 38
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.72 E-value=0.052 Score=54.01 Aligned_cols=153 Identities=14% Similarity=0.051 Sum_probs=101.2
Q ss_pred EEEEECCEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCe
Q 007704 399 AGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHY 478 (592)
Q Consensus 399 ~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~ 478 (592)
.....++.+|+..|..+ .+..+|+.|++=...- ++..-++...+..+++||+....+ +.+++||+++.+
T Consensus 59 GL~~~~~~Ly~stG~~g-----~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~-----~~v~V~D~~Tl~ 127 (268)
T 3nok_A 59 GLVFHQGHFFESTGHQG-----TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTE-----GLLFTWSGMPPQ 127 (268)
T ss_dssp EEEEETTEEEEEETTTT-----EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSS-----CEEEEEETTTTE
T ss_pred eEEEECCEEEEEcCCCC-----EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccC-----CEEEEEECCcCc
Confidence 45556889999988653 3889999998754433 555556777888899999986543 679999999876
Q ss_pred EEE-eccCCCCCceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCCeEEE-cC--CCCCCC-cceEEEEECCEEEEEec
Q 007704 479 WTK-IANMNRRRGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLGSWMS-GE--PMKLSR-GYLGAAVVKEAIYVIGG 553 (592)
Q Consensus 479 W~~-i~~~p~~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~-v~--~lp~~R-~~~s~~v~~~~Iyv~GG 553 (592)
-.. ++. +..+.+++.-+++||+.-| .+.++.+|+.+.+-.. +. .-+.+. ..-.+...+++||+--
T Consensus 128 ~~~ti~~---~~eGwGLt~Dg~~L~vSdG------s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanv- 197 (268)
T 3nok_A 128 RERTTRY---SGEGWGLCYWNGKLVRSDG------GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANI- 197 (268)
T ss_dssp EEEEEEC---SSCCCCEEEETTEEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE-
T ss_pred EEEEEeC---CCceeEEecCCCEEEEECC------CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEE-
Confidence 543 332 2334566667889999865 3579999999876443 22 111111 1123445588888532
Q ss_pred ccCCCccccEEEEEcCC-C---cEEEcc
Q 007704 554 VKNGSEIVDTVERFKEG-Q---GWEEIN 577 (592)
Q Consensus 554 ~~~~~~~~~~v~~Yd~~-~---~W~~v~ 577 (592)
.. .++|.+.|++ . .|..+.
T Consensus 198 w~-----s~~I~vIDp~TG~V~~~Idl~ 220 (268)
T 3nok_A 198 WH-----SSDVLEIDPATGTVVGVIDAS 220 (268)
T ss_dssp TT-----CSEEEEECTTTCBEEEEEECH
T ss_pred CC-----CCeEEEEeCCCCcEEEEEECC
Confidence 21 2689999987 3 466654
No 39
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.71 E-value=0.5 Score=45.91 Aligned_cols=189 Identities=6% Similarity=-0.009 Sum_probs=102.8
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCC---CC-CcceEEEE--ECCEEEEEecCCCCcccceEEEEeCCCC
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLN---GT-KGSLAGAT--IDNKIFAIGGGNGLECFSDVEMLDLDIG 430 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp---~~-r~~~~~~~--~~~~Iyv~GG~~~~~~~~~v~~yD~~t~ 430 (592)
++.+|+.+..+ ..+.+||+.......++... .. ..-..++. -++++||.+.. ....+.+||+...
T Consensus 40 ~g~l~v~~~~~-----~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~----~~~~i~~~d~~g~ 110 (286)
T 1q7f_A 40 QNDIIVADTNN-----HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS----PTHQIQIYNQYGQ 110 (286)
T ss_dssp TCCEEEEEGGG-----TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG----GGCEEEEECTTSC
T ss_pred CCCEEEEECCC-----CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC----CCCEEEEECCCCc
Confidence 57888876532 46899998865544443211 11 12233444 26889988632 1257889996544
Q ss_pred eEEEcccccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCEEEEEecCC
Q 007704 431 KWIRTRSMLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGKLYALGGFD 508 (592)
Q Consensus 431 ~W~~i~~~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~ 508 (592)
.-..+..... ..-..+++. ++.+|+....+ ..+.+||+.......+........-.+++.- ++.||+.+..
T Consensus 111 ~~~~~~~~~~-~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~- 183 (286)
T 1q7f_A 111 FVRKFGATIL-QHPRGVTVDNKGRIIVVECKV-----MRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR- 183 (286)
T ss_dssp EEEEECTTTC-SCEEEEEECTTSCEEEEETTT-----TEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG-
T ss_pred EEEEecCccC-CCceEEEEeCCCCEEEEECCC-----CEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECC-
Confidence 3333321111 111223322 67888876432 5789999876655554322111122233333 6889987653
Q ss_pred CCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 509 GSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 509 ~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
...+.+||+.......+..........+++.- ++.+|+....++ ..|.+||++
T Consensus 184 ----~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~-----~~i~~~~~~ 237 (286)
T 1q7f_A 184 ----AHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNN-----FNLTIFTQD 237 (286)
T ss_dssp ----GTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSS-----CEEEEECTT
T ss_pred ----CCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCC-----EEEEEECCC
Confidence 25799999876655555321111112233332 578888765431 268999977
No 40
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.69 E-value=0.38 Score=48.47 Aligned_cols=183 Identities=13% Similarity=0.128 Sum_probs=95.0
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCe--E
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGK--W 432 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~--W 432 (592)
++++++.||.++ .+..||..+..-... ++........+.+ +++.++.||.+ ..+.+||+.+.. .
T Consensus 66 d~~~l~s~s~Dg-----~v~iWd~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~d-----~~v~iw~~~~~~~~~ 133 (340)
T 1got_B 66 DSRLLLSASQDG-----KLIIWDSYTTNKVHA--IPLRSSWVMTCAYAPSGNYVACGGLD-----NICSIYNLKTREGNV 133 (340)
T ss_dssp TSSEEEEEETTT-----EEEEEETTTCCEEEE--EECSSSCEEEEEECTTSSEEEEEETT-----CEEEEEETTTCSBSC
T ss_pred CCCEEEEEeCCC-----cEEEEECCCCCcceE--eecCCccEEEEEECCCCCEEEEEeCC-----CeEEEEECccCCCcc
Confidence 677888888763 688888877654322 1111111222222 67788888765 467888887642 1
Q ss_pred EEcccccC-cccceEEE-EECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCEEEEEecCCC
Q 007704 433 IRTRSMLQ-KRFALAAA-ELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGKLYALGGFDG 509 (592)
Q Consensus 433 ~~i~~~p~-~R~~~~a~-~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~~ 509 (592)
.....+.. ...-.++. .-++. ++.|+.+ ..+.+||+.++.-...-.. ......++... ++.+++.|+.++
T Consensus 134 ~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d-----~~i~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~sg~~d~ 206 (340)
T 1got_B 134 RVSRELAGHTGYLSCCRFLDDNQ-IVTSSGD-----TTCALWDIETGQQTTTFTG-HTGDVMSLSLAPDTRLFVSGACDA 206 (340)
T ss_dssp EEEEEEECCSSCEEEEEEEETTE-EEEEETT-----SCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTS
T ss_pred eeEEEecCCCccEEEEEECCCCc-EEEEECC-----CcEEEEECCCCcEEEEEcC-CCCceEEEEECCCCCEEEEEeCCC
Confidence 11111111 11111122 23555 4555544 4578899988764332111 11112222222 677888888764
Q ss_pred CCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 510 SAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 510 ~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.+.+||..+..-...-.- ......+++.. ++..++.|+.++ .|.+||..
T Consensus 207 -----~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~d~------~v~iwd~~ 256 (340)
T 1got_B 207 -----SAKLWDVREGMCRQTFTG-HESDINAICFFPNGNAFATGSDDA------TCRLFDLR 256 (340)
T ss_dssp -----CEEEEETTTCSEEEEECC-CSSCEEEEEECTTSSEEEEEETTS------CEEEEETT
T ss_pred -----cEEEEECCCCeeEEEEcC-CcCCEEEEEEcCCCCEEEEEcCCC------cEEEEECC
Confidence 588899877653321110 11111222222 567777787653 37777765
No 41
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.69 E-value=0.13 Score=50.85 Aligned_cols=183 Identities=17% Similarity=0.242 Sum_probs=98.1
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
++++++.|+.+ ..+..||..+.+-... +......-.++.+ ++.+++.|+.+ ..+.+||+.+++-..
T Consensus 76 ~~~~l~s~~~d-----~~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~ 143 (312)
T 4ery_A 76 DSNLLVSASDD-----KTLKIWDVSSGKCLKT--LKGHSNYVFCCNFNPQSNLIVSGSFD-----ESVRIWDVKTGKCLK 143 (312)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEECSSSSEEEEEETT-----SCEEEEETTTCCEEE
T ss_pred CCCEEEEECCC-----CEEEEEECCCCcEEEE--EcCCCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCEEEE
Confidence 66788888866 3688899887654321 1111111222222 56777888765 368899998765432
Q ss_pred cccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCEEEEEecCCCC
Q 007704 435 TRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGKLYALGGFDGS 510 (592)
Q Consensus 435 i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~Lyv~GG~~~~ 510 (592)
. ++..........+ ++.+++.|+.+ ..+.+||+.+......-...... ....+.+ ++..++.|+.+
T Consensus 144 ~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~d-- 213 (312)
T 4ery_A 144 T--LPAHSDPVSAVHFNRDGSLIVSSSYD-----GLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLD-- 213 (312)
T ss_dssp E--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEECCSSCC-CEEEEEECTTSSEEEEEETT--
T ss_pred E--ecCCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCceeeEEeccCCC-ceEEEEECCCCCEEEEEcCC--
Confidence 1 2111111122222 56677778765 35788999887643321111111 1122333 66677777755
Q ss_pred CCCCeEEEEeCCCCeEEEc-CCCCCCCcc-eEEE-EECCEEEEEecccCCCccccEEEEEcCC
Q 007704 511 AMVPSIEVYDPRLGSWMSG-EPMKLSRGY-LGAA-VVKEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 511 ~~~~~v~~yD~~t~~W~~v-~~lp~~R~~-~s~~-v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
..+.+||..+..-... ......... .... ..++..++.||.++ .|.+||..
T Consensus 214 ---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg------~i~vwd~~ 267 (312)
T 4ery_A 214 ---NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN------LVYIWNLQ 267 (312)
T ss_dssp ---TEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTS------CEEEEETT
T ss_pred ---CeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCC------EEEEEECC
Confidence 3688999987754332 211111111 1112 22566777777653 37788865
No 42
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.67 E-value=0.52 Score=45.74 Aligned_cols=186 Identities=6% Similarity=0.043 Sum_probs=99.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEE-ECCEEEEEecCCCCcccceEEEEeCCCCeEEEc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGAT-IDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRT 435 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i 435 (592)
++.+||.+... ...+.+||........+..... ..-..++. -++++|+.... ...+.+||+........
T Consensus 88 ~g~l~v~~~~~----~~~i~~~d~~g~~~~~~~~~~~-~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~~~~ 157 (286)
T 1q7f_A 88 SGDIIVTERSP----THQIQIYNQYGQFVRKFGATIL-QHPRGVTVDNKGRIIVVECK-----VMRVIIFDQNGNVLHKF 157 (286)
T ss_dssp TTEEEEEECGG----GCEEEEECTTSCEEEEECTTTC-SCEEEEEECTTSCEEEEETT-----TTEEEEECTTSCEEEEE
T ss_pred CCeEEEEcCCC----CCEEEEECCCCcEEEEecCccC-CCceEEEEeCCCCEEEEECC-----CCEEEEEcCCCCEEEEe
Confidence 68899886421 2468899965554444432111 11223333 26789987642 25788999876544443
Q ss_pred ccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCEEEEEecCCCCCC
Q 007704 436 RSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGKLYALGGFDGSAM 512 (592)
Q Consensus 436 ~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~~~~~ 512 (592)
..... ........+ ++.+|+.+..+ ..+.+||+.......+........-.+++.- ++.||+.+..++
T Consensus 158 ~~~~~-~~~p~~i~~~~~g~l~v~~~~~-----~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~--- 228 (286)
T 1q7f_A 158 GCSKH-LEFPNGVVVNDKQEIFISDNRA-----HCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNN--- 228 (286)
T ss_dssp ECTTT-CSSEEEEEECSSSEEEEEEGGG-----TEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSS---
T ss_pred CCCCc-cCCcEEEEECCCCCEEEEECCC-----CEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCC---
Confidence 21111 111222233 57899876532 5789999876655555321111122233332 678888865321
Q ss_pred CCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcC
Q 007704 513 VPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKE 569 (592)
Q Consensus 513 ~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~ 569 (592)
..+.+||+....-..+..-.......+++.- ++.+|+... + +.|.+|+.
T Consensus 229 -~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~---~----~~v~v~~~ 278 (286)
T 1q7f_A 229 -FNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLASK---D----YRLYIYRY 278 (286)
T ss_dssp -CEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEET---T----TEEEEEEC
T ss_pred -EEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEECC---C----CeEEEEEc
Confidence 2689999876544444321111122344443 678888742 2 45777765
No 43
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.67 E-value=0.13 Score=54.04 Aligned_cols=198 Identities=9% Similarity=-0.003 Sum_probs=112.8
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCE-EEEEecCCCCcccceEEEEeCCCCeEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNK-IFAIGGGNGLECFSDVEMLDLDIGKWI 433 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~-Iyv~GG~~~~~~~~~v~~yD~~t~~W~ 433 (592)
+++.+++++.++.. ..++.+|..+++...+...+. ......+ +++ |++.+..++ ...++++|+.+++..
T Consensus 189 dg~~la~~s~~~~~--~~i~~~d~~tg~~~~l~~~~~---~~~~~~~spdg~~la~~~~~~g---~~~i~~~d~~~~~~~ 260 (415)
T 2hqs_A 189 DGSKLAYVTFESGR--SALVIQTLANGAVRQVASFPR---HNGAPAFSPDGSKLAFALSKTG---SLNLYVMDLASGQIR 260 (415)
T ss_dssp TSSEEEEEECTTSS--CEEEEEETTTCCEEEEECCSS---CEEEEEECTTSSEEEEEECTTS---SCEEEEEETTTCCEE
T ss_pred CCCEEEEEEecCCC--cEEEEEECCCCcEEEeecCCC---cccCEEEcCCCCEEEEEEecCC---CceEEEEECCCCCEE
Confidence 66777777755322 579999999988876643322 1222233 565 444444332 357999999998876
Q ss_pred EcccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCEEEEEecCCC
Q 007704 434 RTRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGKLYALGGFDG 509 (592)
Q Consensus 434 ~i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~Lyv~GG~~~ 509 (592)
.+..... ......+ +++.+++++..+ ....++++|+.++.-..+... ... ...+.+ +++.+++++.+.
T Consensus 261 ~l~~~~~---~~~~~~~spdg~~l~~~s~~~--g~~~i~~~d~~~~~~~~l~~~--~~~-~~~~~~spdG~~l~~~~~~~ 332 (415)
T 2hqs_A 261 QVTDGRS---NNTEPTWFPDSQNLAFTSDQA--GRPQVYKVNINGGAPQRITWE--GSQ-NQDADVSSDGKFMVMVSSNG 332 (415)
T ss_dssp ECCCCSS---CEEEEEECTTSSEEEEEECTT--SSCEEEEEETTSSCCEECCCS--SSE-EEEEEECTTSSEEEEEEECS
T ss_pred eCcCCCC---cccceEECCCCCEEEEEECCC--CCcEEEEEECCCCCEEEEecC--CCc-ccCeEECCCCCEEEEEECcC
Confidence 6543221 1122222 455444444221 135789999988765544321 122 222333 566555555432
Q ss_pred CCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC-CcEEEccc
Q 007704 510 SAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG-QGWEEINS 578 (592)
Q Consensus 510 ~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~W~~v~~ 578 (592)
. ...++++|+.+...+.+..-. ...+++.. +++.+++++..+. ...++++|.. .....+..
T Consensus 333 g--~~~i~~~d~~~~~~~~l~~~~---~~~~~~~spdg~~l~~~s~~~~---~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 333 G--QQHIAKQDLATGGVQVLSSTF---LDETPSLAPNGTMVIYSSSQGM---GSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp S--CEEEEEEETTTCCEEECCCSS---SCEEEEECTTSSEEEEEEEETT---EEEEEEEETTSCCEEECCC
T ss_pred C--ceEEEEEECCCCCEEEecCCC---CcCCeEEcCCCCEEEEEEcCCC---ccEEEEEECCCCcEEEeeC
Confidence 1 347999999998887765332 22233332 5677777765432 2479999987 66666644
No 44
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.64 E-value=0.53 Score=45.45 Aligned_cols=188 Identities=12% Similarity=0.086 Sum_probs=102.3
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEE-ECCEEEEEecCCCCcccceEEEEeCCCCeEEEc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGAT-IDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRT 435 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i 435 (592)
++.+|+....+ +.+..||+. +.+...........-++++. -++.+|+.... ...+++||+. ++++..
T Consensus 25 ~g~l~v~~~~~-----~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~ 92 (299)
T 2z2n_A 25 KGKVWITQHKA-----NMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENA-----ANKIGRITKK-GIIKEY 92 (299)
T ss_dssp TSCEEEEETTT-----TEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEE
T ss_pred CCCEEEEecCC-----CcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCC-----CCeEEEECCC-CcEEEE
Confidence 67888764322 468999998 77765432111122233333 26788887542 2368889986 455443
Q ss_pred ccccC-cccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCEEEEEecCCCCCC
Q 007704 436 RSMLQ-KRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGKLYALGGFDGSAM 512 (592)
Q Consensus 436 ~~~p~-~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~~~~~ 512 (592)
. ++. ...-+.++.. ++.+|+.... ...+.+||+ ++................++.- ++.+|+....
T Consensus 93 ~-~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~----- 160 (299)
T 2z2n_A 93 T-LPNPDSAPYGITEGPNGDIWFTEMN-----GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQ----- 160 (299)
T ss_dssp E-CSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETT-----
T ss_pred e-CCCcCCCceeeEECCCCCEEEEecC-----CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCC-----
Confidence 3 221 1122333333 5788887532 246889999 6666554322122223344433 6788886531
Q ss_pred CCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCCCcEEE
Q 007704 513 VPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEGQGWEE 575 (592)
Q Consensus 513 ~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~~~W~~ 575 (592)
...+++||+ +.+..............+++.- ++.+|+..... +.|.+||+...+..
T Consensus 161 ~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~~g~~~~ 217 (299)
T 2z2n_A 161 NNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIG------NKIGRITTSGEITE 217 (299)
T ss_dssp TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTT------TEEEEECTTCCEEE
T ss_pred CCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCC------ceEEEECCCCcEEE
Confidence 246899999 7777664211111122233333 46788765322 45888888644443
No 45
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.63 E-value=0.34 Score=50.70 Aligned_cols=184 Identities=11% Similarity=0.146 Sum_probs=101.4
Q ss_pred EECCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcce-EEEE-ECCEEEEEecCCCCcccceEEEEeCCCCeE
Q 007704 355 MLNGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSL-AGAT-IDNKIFAIGGGNGLECFSDVEMLDLDIGKW 432 (592)
Q Consensus 355 ~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~-~~~~-~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W 432 (592)
..++.+++.|+.++ .+..||..+.+-... +....... +++. .+++.++.|+.+ ..+.+||..+++-
T Consensus 277 ~~~~~~l~~~~~d~-----~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~~ 344 (464)
T 3v7d_B 277 SGHGNIVVSGSYDN-----TLIVWDVAQMKCLYI--LSGHTDRIYSTIYDHERKRCISASMD-----TTIRIWDLENGEL 344 (464)
T ss_dssp EEETTEEEEEETTS-----CEEEEETTTTEEEEE--ECCCSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTTEE
T ss_pred cCCCCEEEEEeCCC-----eEEEEECCCCcEEEE--ecCCCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCcE
Confidence 34566777787663 588999988765332 11111112 2222 266777777755 3688999988754
Q ss_pred EEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEECCEEEEEecCCCCCC
Q 007704 433 IRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVLNGKLYALGGFDGSAM 512 (592)
Q Consensus 433 ~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~~~~Lyv~GG~~~~~~ 512 (592)
.. .+............++..++.|+.+ ..+.+||+.+..-...... .......+...++.+++.|+ +
T Consensus 345 ~~--~~~~h~~~v~~~~~~~~~l~s~s~d-----g~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-d---- 411 (464)
T 3v7d_B 345 MY--TLQGHTALVGLLRLSDKFLVSAAAD-----GSIRGWDANDYSRKFSYHH-TNLSAITTFYVSDNILVSGS-E---- 411 (464)
T ss_dssp EE--EECCCSSCEEEEEECSSEEEEEETT-----SEEEEEETTTCCEEEEEEC-TTCCCEEEEEECSSEEEEEE-T----
T ss_pred EE--EEeCCCCcEEEEEEcCCEEEEEeCC-----CcEEEEECCCCceeeeecC-CCCccEEEEEeCCCEEEEec-C----
Confidence 32 2222222233444567777777765 4688999987653322211 12222334444777777776 3
Q ss_pred CCeEEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEEEEEc
Q 007704 513 VPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFK 568 (592)
Q Consensus 513 ~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd 568 (592)
..+.+||..+++-......+......+++.-++.+++.|+.++. .-++++|
T Consensus 412 -g~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~~~g~----~~i~~ld 462 (464)
T 3v7d_B 412 -NQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQ----SFLEILD 462 (464)
T ss_dssp -TEEEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEEEEEETTE----EEEEEEE
T ss_pred -CeEEEEECCCCcEEehhhccCCCcEEEEEecCCEEEEEEEeCCe----EEEEEee
Confidence 36899999988765532233332233334445555555554321 3355555
No 46
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.62 E-value=0.12 Score=51.07 Aligned_cols=181 Identities=14% Similarity=0.238 Sum_probs=97.7
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
+++.++.|+.++ .+..||..+.+....- .........+.+ ++++++.|+.+ ..+.+||..+++-..
T Consensus 34 ~~~~l~s~~~dg-----~i~iw~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~ 101 (312)
T 4ery_A 34 NGEWLASSSADK-----LIKIWGAYDGKFEKTI--SGHKLGISDVAWSSDSNLLVSASDD-----KTLKIWDVSSGKCLK 101 (312)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTCCEEEEE--CCCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEE
T ss_pred CCCEEEEeeCCC-----eEEEEeCCCcccchhh--ccCCCceEEEEEcCCCCEEEEECCC-----CEEEEEECCCCcEEE
Confidence 567778888664 4778888877764431 111122222332 67788888754 468899998775432
Q ss_pred cccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCEEEEEecCCCC
Q 007704 435 TRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGKLYALGGFDGS 510 (592)
Q Consensus 435 i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~Lyv~GG~~~~ 510 (592)
. +......-..+.+ ++.+++.|+.+ ..+.+||+.++.-... ++........+.+ ++.+++.|+.++
T Consensus 102 ~--~~~~~~~v~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~- 171 (312)
T 4ery_A 102 T--LKGHSNYVFCCNFNPQSNLIVSGSFD-----ESVRIWDVKTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDG- 171 (312)
T ss_dssp E--EECCSSCEEEEEECSSSSEEEEEETT-----SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-
T ss_pred E--EcCCCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCCC-
Confidence 1 1111111111222 55677777765 3578899987653322 1211111223333 677888888654
Q ss_pred CCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecccCCCccccEEEEEcCC
Q 007704 511 AMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 511 ~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.+.+||..+......-...... ....+.+ ++..++.|+.+ ..|.+||..
T Consensus 172 ----~i~~wd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~d------~~i~iwd~~ 222 (312)
T 4ery_A 172 ----LCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLD------NTLKLWDYS 222 (312)
T ss_dssp ----CEEEEETTTCCEEEEECCSSCC-CEEEEEECTTSSEEEEEETT------TEEEEEETT
T ss_pred ----cEEEEECCCCceeeEEeccCCC-ceEEEEECCCCCEEEEEcCC------CeEEEEECC
Confidence 5888998876543321111111 1122222 45666666654 347778765
No 47
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.59 E-value=0.21 Score=52.21 Aligned_cols=183 Identities=17% Similarity=0.312 Sum_probs=103.0
Q ss_pred EEECCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeEE
Q 007704 354 AMLNGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWI 433 (592)
Q Consensus 354 v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~ 433 (592)
+...+.+++.|+.+ ..+..||..+++-... +........++..++..++.|+.+ ..+.+||..+++-.
T Consensus 165 ~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~l~s~s~d-----g~i~~wd~~~~~~~ 232 (445)
T 2ovr_B 165 SQMRDNIIISGSTD-----RTLKVWNAETGECIHT--LYGHTSTVRCMHLHEKRVVSGSRD-----ATLRVWDIETGQCL 232 (445)
T ss_dssp EEEETTEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEEETTEEEEEETT-----SEEEEEESSSCCEE
T ss_pred EEecCCEEEEEeCC-----CeEEEEECCcCcEEEE--ECCCCCcEEEEEecCCEEEEEeCC-----CEEEEEECCCCcEE
Confidence 33456677778766 3588899888764332 222222233444456667777654 47888998876543
Q ss_pred EcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEECCEEEEEecCCCCCCC
Q 007704 434 RTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVLNGKLYALGGFDGSAMV 513 (592)
Q Consensus 434 ~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~~~~Lyv~GG~~~~~~~ 513 (592)
.. +........+...++..++.|+.+ ..+.+||+.+..-... +.........+.+++..++.|+.++
T Consensus 233 ~~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d~---- 299 (445)
T 2ovr_B 233 HV--LMGHVAAVRCVQYDGRRVVSGAYD-----FMVKVWDPETETCLHT--LQGHTNRVYSLQFDGIHVVSGSLDT---- 299 (445)
T ss_dssp EE--EECCSSCEEEEEECSSCEEEEETT-----SCEEEEEGGGTEEEEE--ECCCSSCEEEEEECSSEEEEEETTS----
T ss_pred EE--EcCCcccEEEEEECCCEEEEEcCC-----CEEEEEECCCCcEeEE--ecCCCCceEEEEECCCEEEEEeCCC----
Confidence 22 111112222334477777888765 3578889877653222 2211222233444777788888654
Q ss_pred CeEEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEEEEEcCC
Q 007704 514 PSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 514 ~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.+.+||..+..-... +............++..++.|+.++ .|.+||..
T Consensus 300 -~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~dg------~i~vwd~~ 347 (445)
T 2ovr_B 300 -SIRVWDVETGNCIHT--LTGHQSLTSGMELKDNILVSGNADS------TVKIWDIK 347 (445)
T ss_dssp -CEEEEETTTCCEEEE--ECCCCSCEEEEEEETTEEEEEETTS------CEEEEETT
T ss_pred -eEEEEECCCCCEEEE--EcCCcccEEEEEEeCCEEEEEeCCC------eEEEEECC
Confidence 588999887653321 1111222233344556667777553 48888875
No 48
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.58 E-value=0.1 Score=54.66 Aligned_cols=184 Identities=14% Similarity=0.242 Sum_probs=104.1
Q ss_pred EEEECCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeE
Q 007704 353 AAMLNGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKW 432 (592)
Q Consensus 353 ~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W 432 (592)
++..++..++.|+.+ ..+..||..+.+-... +......-.++..++.+++.|+.+ ..+.+||..+++-
T Consensus 124 ~~~~~g~~l~sg~~d-----g~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~ 191 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDD-----NTLKVWSAVTGKCLRT--LVGHTGGVWSSQMRDNIIISGSTD-----RTLKVWNAETGEC 191 (445)
T ss_dssp EEEEETTEEEEEETT-----SCEEEEETTTCCEEEE--CCCCSSCEEEEEEETTEEEEEETT-----SCEEEEETTTTEE
T ss_pred EEEEcCCEEEEEECC-----CcEEEEECCCCcEEEE--EcCCCCCEEEEEecCCEEEEEeCC-----CeEEEEECCcCcE
Confidence 344567777888866 3588899887664322 222222233344456677777755 4688999988754
Q ss_pred EEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEECCEEEEEecCCCCCC
Q 007704 433 IRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVLNGKLYALGGFDGSAM 512 (592)
Q Consensus 433 ~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~~~~Lyv~GG~~~~~~ 512 (592)
... +......-.+...++..++.|+.+ ..+.+||+.++.-...- ........++..++..++.|+.++
T Consensus 192 ~~~--~~~h~~~v~~~~~~~~~l~s~s~d-----g~i~~wd~~~~~~~~~~--~~~~~~v~~~~~~~~~l~~~~~dg--- 259 (445)
T 2ovr_B 192 IHT--LYGHTSTVRCMHLHEKRVVSGSRD-----ATLRVWDIETGQCLHVL--MGHVAAVRCVQYDGRRVVSGAYDF--- 259 (445)
T ss_dssp EEE--ECCCSSCEEEEEEETTEEEEEETT-----SEEEEEESSSCCEEEEE--ECCSSCEEEEEECSSCEEEEETTS---
T ss_pred EEE--ECCCCCcEEEEEecCCEEEEEeCC-----CEEEEEECCCCcEEEEE--cCCcccEEEEEECCCEEEEEcCCC---
Confidence 322 211111222233345556667655 46888998876533221 111122233444788888888654
Q ss_pred CCeEEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEEEEEcCC
Q 007704 513 VPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 513 ~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.+.+||+.+..-... +...........+++..++.|+.++ .+.+||..
T Consensus 260 --~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d~------~i~i~d~~ 307 (445)
T 2ovr_B 260 --MVKVWDPETETCLHT--LQGHTNRVYSLQFDGIHVVSGSLDT------SIRVWDVE 307 (445)
T ss_dssp --CEEEEEGGGTEEEEE--ECCCSSCEEEEEECSSEEEEEETTS------CEEEEETT
T ss_pred --EEEEEECCCCcEeEE--ecCCCCceEEEEECCCEEEEEeCCC------eEEEEECC
Confidence 578889877653321 1112222333444777777787654 38888875
No 49
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.56 E-value=0.08 Score=55.43 Aligned_cols=186 Identities=12% Similarity=0.185 Sum_probs=103.6
Q ss_pred EEEECCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeE
Q 007704 353 AAMLNGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKW 432 (592)
Q Consensus 353 ~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W 432 (592)
.+..++.+++.|+.++ .+.+||..+++.... +........++..++..++.|+.+ ..+.+||..+..-
T Consensus 178 ~l~~~~~~l~sg~~dg-----~i~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~s~s~d-----g~i~vwd~~~~~~ 245 (435)
T 1p22_A 178 CLQYDERVIITGSSDS-----TVRVWDVNTGEMLNT--LIHHCEAVLHLRFNNGMMVTCSKD-----RSIAVWDMASPTD 245 (435)
T ss_dssp EEECCSSEEEEEETTS-----CEEEEESSSCCEEEE--ECCCCSCEEEEECCTTEEEEEETT-----SCEEEEECSSSSC
T ss_pred EEEECCCEEEEEcCCC-----eEEEEECCCCcEEEE--EcCCCCcEEEEEEcCCEEEEeeCC-----CcEEEEeCCCCCC
Confidence 3444788888888763 588899888765332 222222334444566677777755 4678888876542
Q ss_pred EEc-ccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEECCEEEEEecCCCCC
Q 007704 433 IRT-RSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVLNGKLYALGGFDGSA 511 (592)
Q Consensus 433 ~~i-~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~~~~Lyv~GG~~~~~ 511 (592)
... ..+........+...++..++.|+.+ ..+.+||+.+..-... +........++..++.+++.|+.++
T Consensus 246 ~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~g~~dg-- 316 (435)
T 1p22_A 246 ITLRRVLVGHRAAVNVVDFDDKYIVSASGD-----RTIKVWNTSTCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDN-- 316 (435)
T ss_dssp CEEEEEECCCSSCEEEEEEETTEEEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEEETTEEEEEETTS--
T ss_pred ceeeeEecCCCCcEEEEEeCCCEEEEEeCC-----CeEEEEECCcCcEEEE--EcCCCCcEEEEEeCCCEEEEEeCCC--
Confidence 211 11111112222333366666677654 4688999887654322 1111122233444667788887654
Q ss_pred CCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEEEEEcCC
Q 007704 512 MVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 512 ~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.+.+||..+..-... +........++.+++..++.|+.++ .|.+||..
T Consensus 317 ---~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~~l~sg~~dg------~i~vwd~~ 364 (435)
T 1p22_A 317 ---TIRLWDIECGACLRV--LEGHEELVRCIRFDNKRIVSGAYDG------KIKVWDLV 364 (435)
T ss_dssp ---CEEEEETTTCCEEEE--ECCCSSCEEEEECCSSEEEEEETTS------CEEEEEHH
T ss_pred ---eEEEEECCCCCEEEE--EeCCcCcEEEEEecCCEEEEEeCCC------cEEEEECC
Confidence 588999887643221 1111222333344777888888654 37777753
No 50
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.54 E-value=0.16 Score=48.77 Aligned_cols=183 Identities=14% Similarity=0.061 Sum_probs=96.6
Q ss_pred CCEEEE-EeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE-CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYI-FGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI-DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv-~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
++.+|+ ..+.+ +.+.+||+.+........... ..-++++.. +++||+... ...+.+||+.+.....
T Consensus 34 ~g~l~v~~~~~~-----~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~------~~~i~~~d~~~~~~~~ 101 (270)
T 1rwi_B 34 AGNVYVTSEGMY-----GRVVKLATGSTGTTVLPFNGL-YQPQGLAVDGAGTVYVTDF------NNRVVTLAAGSNNQTV 101 (270)
T ss_dssp TCCEEEEECSSS-----CEEEEECC-----EECCCCSC-CSCCCEEECTTCCEEEEET------TTEEEEECTTCSCCEE
T ss_pred CCCEEEEccCCC-----CcEEEecCCCcccceEeeCCc-CCcceeEECCCCCEEEEcC------CCEEEEEeCCCceEee
Confidence 577888 42322 468889988776555432211 112233333 678888764 2478999998776554
Q ss_pred cccccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCEEEEEecCCCCCC
Q 007704 435 TRSMLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGKLYALGGFDGSAM 512 (592)
Q Consensus 435 i~~~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~~~~~ 512 (592)
...... ..-..++.. ++++|+....+ ..+.+||..+........... ..-..++.- +++||+....
T Consensus 102 ~~~~~~-~~p~~i~~~~~g~l~v~~~~~-----~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~~----- 169 (270)
T 1rwi_B 102 LPFDGL-NYPEGLAVDTQGAVYVADRGN-----NRVVKLAAGSKTQTVLPFTGL-NDPDGVAVDNSGNVYVTDTD----- 169 (270)
T ss_dssp CCCCSC-SSEEEEEECTTCCEEEEEGGG-----TEEEEECTTCCSCEECCCCSC-CSCCCEEECTTCCEEEEEGG-----
T ss_pred eecCCc-CCCcceEECCCCCEEEEECCC-----CEEEEEECCCceeEeeccccC-CCceeEEEeCCCCEEEEECC-----
Confidence 432111 112233332 67898875432 468888877665443321111 111223333 6788887643
Q ss_pred CCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 513 VPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 513 ~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
...+.+||+....-........ ....++++- ++.+|+....+ +.|.+||+.
T Consensus 170 ~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~~~------~~v~~~~~~ 221 (270)
T 1rwi_B 170 NNRVVKLEAESNNQVVLPFTDI-TAPWGIAVDEAGTVYVTEHNT------NQVVKLLAG 221 (270)
T ss_dssp GTEEEEECTTTCCEEECCCSSC-CSEEEEEECTTCCEEEEETTT------SCEEEECTT
T ss_pred CCEEEEEecCCCceEeecccCC-CCceEEEECCCCCEEEEECCC------CcEEEEcCC
Confidence 2468999988766544321111 222333333 45788866432 348899987
No 51
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.53 E-value=0.095 Score=51.65 Aligned_cols=183 Identities=18% Similarity=0.180 Sum_probs=100.6
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
+++.++.|+.+ ..+..||..+.+......+.........+.+ +++.++.|+.+ ..+.+||..+.+...
T Consensus 108 ~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~v~~~d~~~~~~~~ 177 (337)
T 1gxr_A 108 DGCTLIVGGEA-----STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQTLVR 177 (337)
T ss_dssp TSSEEEEEESS-----SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCceee
Confidence 56777777755 4688999988875443333222222223333 66777777754 368899998876543
Q ss_pred cccccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCEEEEEecCCCCCC
Q 007704 435 TRSMLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGKLYALGGFDGSAM 512 (592)
Q Consensus 435 i~~~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~~~~~ 512 (592)
.-..... .-.+++.. ++..++.|+.+ ..+.+||+.+..-...-..+. ...++... ++.++++|+.++
T Consensus 178 ~~~~~~~-~i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~~~--- 246 (337)
T 1gxr_A 178 QFQGHTD-GASCIDISNDGTKLWTGGLD-----NTVRSWDLREGRQLQQHDFTS--QIFSLGYCPTGEWLAVGMESS--- 246 (337)
T ss_dssp EECCCSS-CEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECSS--CEEEEEECTTSSEEEEEETTS---
T ss_pred eeecccC-ceEEEEECCCCCEEEEEecC-----CcEEEEECCCCceEeeecCCC--ceEEEEECCCCCEEEEEcCCC---
Confidence 2111111 11222222 56667777654 468899998876443322222 12223332 677777777543
Q ss_pred CCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 513 VPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 513 ~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.+.+||..+..-..+... .....+++.. ++..++.|+.+ ..+.+||..
T Consensus 247 --~i~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d------g~i~~~~~~ 295 (337)
T 1gxr_A 247 --NVEVLHVNKPDKYQLHLH--ESCVLSLKFAYCGKWFVSTGKD------NLLNAWRTP 295 (337)
T ss_dssp --CEEEEETTSSCEEEECCC--SSCEEEEEECTTSSEEEEEETT------SEEEEEETT
T ss_pred --cEEEEECCCCCeEEEcCC--ccceeEEEECCCCCEEEEecCC------CcEEEEECC
Confidence 588899887654443221 1112223332 46667777754 358888876
No 52
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.51 E-value=0.29 Score=47.84 Aligned_cols=64 Identities=14% Similarity=0.214 Sum_probs=36.5
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCC--CeEEECCCCCCCCcceEEEEE----CCEEEEEecCCCCcccceEEEEeCCCC
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPAN--DEWTSRPSLNGTKGSLAGATI----DNKIFAIGGGNGLECFSDVEMLDLDIG 430 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t--~~W~~l~~lp~~r~~~~~~~~----~~~Iyv~GG~~~~~~~~~v~~yD~~t~ 430 (592)
++.+++.|+.++ .+..||..+ ..+..+..+......-.++.+ ++++++.|+.+ ..+.+||..+.
T Consensus 22 ~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d-----g~v~vwd~~~~ 91 (351)
T 3f3f_A 22 YGRHVATCSSDQ-----HIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD-----KTVKLWEEDPD 91 (351)
T ss_dssp SSSEEEEEETTS-----EEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT-----SCEEEEEECTT
T ss_pred CCCEEEEeeCCC-----eEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC-----CeEEEEecCCC
Confidence 667778887653 567777664 344443333222222333333 37788888765 35677777654
No 53
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.50 E-value=0.12 Score=53.46 Aligned_cols=188 Identities=13% Similarity=0.082 Sum_probs=102.5
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCC---CCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCe
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLN---GTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGK 431 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp---~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~ 431 (592)
++.+++.|+.+ ..+..||+.+++........ ........+.+ ++++|+.|+.+ ..+.+||+.+.+
T Consensus 133 ~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d-----~~v~~~d~~~~~ 202 (433)
T 3bws_A 133 NTRLAIPLLED-----EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA-----NAVHVFDLKTLA 202 (433)
T ss_dssp SSEEEEEBTTS-----SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG-----TEEEEEETTTCC
T ss_pred CCeEEEEeCCC-----CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC-----CEEEEEECCCce
Confidence 67777777644 35899999988776543221 22222223333 78888888643 478999998865
Q ss_pred EEEcccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCEEEEEecCC
Q 007704 432 WIRTRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGKLYALGGFD 508 (592)
Q Consensus 432 W~~i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~ 508 (592)
....-.. ....-.+++.. +..+|+.++.+ ..+.+||+.++.....-.. .....+++.. +++.+++++..
T Consensus 203 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~ 274 (433)
T 3bws_A 203 YKATVDL-TGKWSKILLYDPIRDLVYCSNWIS-----EDISVIDRKTKLEIRKTDK--IGLPRGLLLSKDGKELYIAQFS 274 (433)
T ss_dssp EEEEEEC-SSSSEEEEEEETTTTEEEEEETTT-----TEEEEEETTTTEEEEECCC--CSEEEEEEECTTSSEEEEEEEE
T ss_pred EEEEEcC-CCCCeeEEEEcCCCCEEEEEecCC-----CcEEEEECCCCcEEEEecC--CCCceEEEEcCCCCEEEEEECC
Confidence 4332111 11112223333 45677776543 4789999998876443222 2222233333 55444444432
Q ss_pred CCC---CCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CC-EEEEEecccCCCccccEEEEEcCC
Q 007704 509 GSA---MVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KE-AIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 509 ~~~---~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~-~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
... .-..+.+||+.+......... +.....++.. ++ .+|+.++.+ ..+.+||+.
T Consensus 275 ~~~~~~~dg~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~------~~v~v~d~~ 333 (433)
T 3bws_A 275 ASNQESGGGRLGIYSMDKEKLIDTIGP--PGNKRHIVSGNTENKIYVSDMCC------SKIEVYDLK 333 (433)
T ss_dssp SCTTCSCCEEEEEEETTTTEEEEEEEE--EECEEEEEECSSTTEEEEEETTT------TEEEEEETT
T ss_pred CCccccCCCeEEEEECCCCcEEeeccC--CCCcceEEECCCCCEEEEEecCC------CEEEEEECC
Confidence 221 124789999988765443211 1111222222 33 677776653 458889876
No 54
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.50 E-value=0.64 Score=46.12 Aligned_cols=183 Identities=14% Similarity=0.074 Sum_probs=97.9
Q ss_pred CEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCC--------CcceEEEEE--CCEEEEEecCCCCcccceEEEEeC
Q 007704 358 GELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGT--------KGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDL 427 (592)
Q Consensus 358 ~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~--------r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~ 427 (592)
+.+|+.++.+ +.++.||+.+.+-...-..+.. ..-+.++.. ++.+|+.+... ...+++||+
T Consensus 101 ~~l~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~ 171 (353)
T 3vgz_A 101 QTLWFGNTVN-----SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDG 171 (353)
T ss_dssp TEEEEEETTT-----TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEET
T ss_pred CEEEEEecCC-----CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcC
Confidence 4577766543 4799999998765322111111 112233332 35577776321 256999999
Q ss_pred CCCeEEEcccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCC---CCCceeEEEEE--CCE
Q 007704 428 DIGKWIRTRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMN---RRRGCHSLAVL--NGK 500 (592)
Q Consensus 428 ~t~~W~~i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p---~~R~~~s~v~~--~~~ 500 (592)
.+.+-...-+. ....-..++.. ++.+|+... ...+.+||+.++.-...-... ......+++.. ++.
T Consensus 172 ~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 244 (353)
T 3vgz_A 172 GNIKLKTAIQN-TGKMSTGLALDSEGKRLYTTNA------DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQR 244 (353)
T ss_dssp TTTEEEEEECC-CCTTCCCCEEETTTTEEEEECT------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTE
T ss_pred CCCceEEEecC-CCCccceEEECCCCCEEEEEcC------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCE
Confidence 88765432221 11112222332 456777643 257889999987644332221 12222233333 456
Q ss_pred EEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-C-CEEEEEecccCCCccccEEEEEcCC
Q 007704 501 LYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-K-EAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 501 Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~-~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+|+.+.. .+.+.+||+.+.+....-+.+.+ ..++.. + +.+|+.+..+ +.|.+||..
T Consensus 245 l~~~~~~-----~~~v~~~d~~~~~~~~~~~~~~~---~~~~~s~dg~~l~v~~~~~------~~v~~~d~~ 302 (353)
T 3vgz_A 245 AFITDSK-----AAEVLVVDTRNGNILAKVAAPES---LAVLFNPARNEAYVTHRQA------GKVSVIDAK 302 (353)
T ss_dssp EEEEESS-----SSEEEEEETTTCCEEEEEECSSC---CCEEEETTTTEEEEEETTT------TEEEEEETT
T ss_pred EEEEeCC-----CCEEEEEECCCCcEEEEEEcCCC---ceEEECCCCCEEEEEECCC------CeEEEEECC
Confidence 7776532 35799999988776543333333 223333 3 4577765432 468889875
No 55
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.43 E-value=0.24 Score=49.20 Aligned_cols=151 Identities=17% Similarity=0.115 Sum_probs=95.2
Q ss_pred eEEEEEC-CEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCC
Q 007704 398 LAGATID-NKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPRE 476 (592)
Q Consensus 398 ~~~~~~~-~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t 476 (592)
+.++..+ +.+|+..|..+ .+.+..+|+.|++=...-+++...++...+..++++|+..-. .+.+.+||+.+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~-----~~~v~viD~~t 95 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG---RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL-----KNIGFIYDRRT 95 (266)
T ss_dssp EEEEECSTTEEEEEECSTT---TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT-----CSEEEEEETTT
T ss_pred ccEEEeCCCeEEEECCCCC---CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec-----CCEEEEEECCC
Confidence 4555544 89999877322 368999999999865543444444666778889999998643 26799999998
Q ss_pred CeEE-EeccCCCCCceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCCeEEE-cC--CCCCCC-cceEEEEECCEEEEE
Q 007704 477 HYWT-KIANMNRRRGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLGSWMS-GE--PMKLSR-GYLGAAVVKEAIYVI 551 (592)
Q Consensus 477 ~~W~-~i~~~p~~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~-v~--~lp~~R-~~~s~~v~~~~Iyv~ 551 (592)
.+=. .++. +. ..+.+++.-++++|+..| .+.+..+|+.+.+-.. +. .-+.+. ....+...++++|+-
T Consensus 96 ~~v~~~i~~-g~-~~g~glt~Dg~~l~vs~g------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn 167 (266)
T 2iwa_A 96 LSNIKNFTH-QM-KDGWGLATDGKILYGSDG------TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWAN 167 (266)
T ss_dssp TEEEEEEEC-CS-SSCCEEEECSSSEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred CcEEEEEEC-CC-CCeEEEEECCCEEEEECC------CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEe
Confidence 7532 2322 11 223344444677888754 3689999999865433 22 111121 122344458888875
Q ss_pred ecccCCCccccEEEEEcCC
Q 007704 552 GGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 552 GG~~~~~~~~~~v~~Yd~~ 570 (592)
-.. .++|.+.|+.
T Consensus 168 ~~~------~~~V~vID~~ 180 (266)
T 2iwa_A 168 IWQ------TDCIARISAK 180 (266)
T ss_dssp ETT------SSEEEEEETT
T ss_pred cCC------CCeEEEEECC
Confidence 432 2679999986
No 56
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.42 E-value=0.011 Score=60.13 Aligned_cols=147 Identities=15% Similarity=0.168 Sum_probs=78.0
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCe-EE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGK-WI 433 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~-W~ 433 (592)
++++++.|+.++ .+..||..++.|..+..+.........+.+ +++.++.|+.+ ..+.+||..++. |.
T Consensus 22 ~g~~l~~~~~d~-----~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 22 QRTEFVTTTATN-----QVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD-----RNAYVYEKRPDGTWK 91 (377)
T ss_dssp SSSEEECCCSSS-----CBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT-----SSEEEC------CCC
T ss_pred CCCEEEEecCCC-----EEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC-----CeEEEEEcCCCCcee
Confidence 567777777653 567888888888888776654444344444 56777887755 368888888776 44
Q ss_pred EcccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCe-EEEeccCCC--CCceeEEEEE-CCEEEEEecC
Q 007704 434 RTRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHY-WTKIANMNR--RRGCHSLAVL-NGKLYALGGF 507 (592)
Q Consensus 434 ~i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~-W~~i~~~p~--~R~~~s~v~~-~~~Lyv~GG~ 507 (592)
....+.........+.+ ++.+++.|+.+ ..+.+||+.+.. |..+..+.. .....+++.. ++.+++.|+.
T Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 92 QTLVLLRLNRAATFVRWSPNEDKFAVGSGA-----RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp CEEECCCCSSCEEEEECCTTSSCCEEEESS-----SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred eeeEecccCCceEEEEECCCCCEEEEEecC-----CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence 33222211111222222 56677777755 357788887764 333322222 2222233333 6778888886
Q ss_pred CCCCCCCeEEEEeCCC
Q 007704 508 DGSAMVPSIEVYDPRL 523 (592)
Q Consensus 508 ~~~~~~~~v~~yD~~t 523 (592)
++ .+.+||..+
T Consensus 167 d~-----~i~iwd~~~ 177 (377)
T 3dwl_C 167 DR-----KAYVLSAYV 177 (377)
T ss_dssp SS-----CEEEEEECC
T ss_pred CC-----EEEEEEEEe
Confidence 53 477788653
No 57
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.41 E-value=0.2 Score=50.60 Aligned_cols=173 Identities=17% Similarity=0.202 Sum_probs=89.6
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
++. ++.|+.+ ..+..||..+.+.... +.........+.+ ++++++.|+.+ ..+.+||+.+.+-..
T Consensus 154 ~~~-l~s~s~d-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d-----~~v~~wd~~~~~~~~ 220 (340)
T 1got_B 154 DNQ-IVTSSGD-----TTCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACD-----ASAKLWDVREGMCRQ 220 (340)
T ss_dssp TTE-EEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCSEEE
T ss_pred CCc-EEEEECC-----CcEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCC-----CcEEEEECCCCeeEE
Confidence 444 4555544 3578889888765332 1111112222222 67788888765 367889988765332
Q ss_pred cccccCcccc-eEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCEEEEEecCCCC
Q 007704 435 TRSMLQKRFA-LAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGKLYALGGFDGS 510 (592)
Q Consensus 435 i~~~p~~R~~-~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~Lyv~GG~~~~ 510 (592)
. +...... .+++.. ++.+++.|+.+ ..+.+||+.+..-...-..+........+.+ ++.+++.|+.++
T Consensus 221 ~--~~~h~~~v~~v~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~- 292 (340)
T 1got_B 221 T--FTGHESDINAICFFPNGNAFATGSDD-----ATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF- 292 (340)
T ss_dssp E--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS-
T ss_pred E--EcCCcCCEEEEEEcCCCCEEEEEcCC-----CcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCC-
Confidence 1 1111111 122222 56777788765 3578899887653322111211122233334 677888887653
Q ss_pred CCCCeEEEEeCCCCeEE-EcCCCCCCCcceEEEEE-CCEEEEEecccC
Q 007704 511 AMVPSIEVYDPRLGSWM-SGEPMKLSRGYLGAAVV-KEAIYVIGGVKN 556 (592)
Q Consensus 511 ~~~~~v~~yD~~t~~W~-~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~ 556 (592)
.+.+||..+..-. .+.. +...-.+++.. ++..++.||.++
T Consensus 293 ----~i~vwd~~~~~~~~~~~~--h~~~v~~~~~s~dg~~l~s~s~D~ 334 (340)
T 1got_B 293 ----NCNVWDALKADRAGVLAG--HDNRVSCLGVTDDGMAVATGSWDS 334 (340)
T ss_dssp ----EEEEEETTTCCEEEEEEC--CSSCEEEEEECTTSSCEEEEETTS
T ss_pred ----eEEEEEcccCcEeeEeec--CCCcEEEEEEcCCCCEEEEEcCCc
Confidence 5888998664322 1211 11111222222 566777777654
No 58
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.40 E-value=0.75 Score=44.36 Aligned_cols=184 Identities=9% Similarity=-0.001 Sum_probs=99.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE-CCEEEEEecCCCCcccceEEEEeCCCCeEEEc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI-DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRT 435 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i 435 (592)
++.+|+....+ ..+++||+. +++...........-+.++.. ++++|+.... ...+.+||+ +++....
T Consensus 67 ~g~l~v~~~~~-----~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~ 134 (299)
T 2z2n_A 67 DGEVWFTENAA-----NKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMN-----GNRIGRITD-DGKIREY 134 (299)
T ss_dssp TSCEEEEETTT-----TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEE
T ss_pred CCCEEEeCCCC-----CeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecC-----CceEEEECC-CCCEEEe
Confidence 67788875422 358899986 455444311111222333333 5789887532 247889999 6666543
Q ss_pred ccccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCEEEEEecCCCCCCC
Q 007704 436 RSMLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGKLYALGGFDGSAMV 513 (592)
Q Consensus 436 ~~~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~~~~~~ 513 (592)
........-..++.. ++.+|+.... ...+++||+ ++....+..........+++.- ++.||+.... .
T Consensus 135 ~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----~ 203 (299)
T 2z2n_A 135 ELPNKGSYPSFITLGSDNALWFTENQ-----NNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEII-----G 203 (299)
T ss_dssp ECSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETT-----T
T ss_pred cCCCCCCCCceEEEcCCCCEEEEeCC-----CCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccC-----C
Confidence 211111222233333 5788886521 257899999 7777664211111222233333 5778887532 2
Q ss_pred CeEEEEeCCCCeEEEcCCCCCC-CcceEEEEE-CCEEEEEecccCCCccccEEEEEcCCC
Q 007704 514 PSIEVYDPRLGSWMSGEPMKLS-RGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEGQ 571 (592)
Q Consensus 514 ~~v~~yD~~t~~W~~v~~lp~~-R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~~ 571 (592)
+.+.+||+ ++.+.... .+.. ....+++.- ++.+|+..... +.|.+||+..
T Consensus 204 ~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~------~~i~~~d~~g 255 (299)
T 2z2n_A 204 NKIGRITT-SGEITEFK-IPTPNARPHAITAGAGIDLWFTEWGA------NKIGRLTSNN 255 (299)
T ss_dssp TEEEEECT-TCCEEEEE-CSSTTCCEEEEEECSTTCEEEEETTT------TEEEEEETTT
T ss_pred ceEEEECC-CCcEEEEE-CCCCCCCceeEEECCCCCEEEeccCC------ceEEEECCCC
Confidence 46899999 77776642 2211 122333332 56788764222 4588888763
No 59
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.34 E-value=0.074 Score=60.59 Aligned_cols=188 Identities=12% Similarity=0.169 Sum_probs=106.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--C--CEEEEEecCCCCcccceEEEEeCCCCeE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--D--NKIFAIGGGNGLECFSDVEMLDLDIGKW 432 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~--~~Iyv~GG~~~~~~~~~v~~yD~~t~~W 432 (592)
++..++.||.+ ..+.+||..+.++..+..+......-.++.+ + +..++.|+.+ ..+.+||..+++|
T Consensus 20 dg~~latg~~d-----g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D-----g~I~vwd~~~~~~ 89 (753)
T 3jro_A 20 YGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENGRW 89 (753)
T ss_dssp SSCCEEEEETT-----TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT-----SCEEEEEEETTEE
T ss_pred CCCeEEEEECC-----CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC-----CeEEEEECCCCcc
Confidence 56677778766 3678888887777766555444433344444 3 7788888765 3688899999988
Q ss_pred EEcccccCcccceEEEEE--C--CEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccC-CCCCceeEEEEE----------
Q 007704 433 IRTRSMLQKRFALAAAEL--N--GVLYATGGYDGNEYMNSAERFDPREHYWTKIANM-NRRRGCHSLAVL---------- 497 (592)
Q Consensus 433 ~~i~~~p~~R~~~~a~~~--~--g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~-p~~R~~~s~v~~---------- 497 (592)
..+..+.........+.+ + +.+++.|+.+ ..+.+||+.+..-...... .......++...
T Consensus 90 ~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d-----g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~ 164 (753)
T 3jro_A 90 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 164 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-------
T ss_pred cccccccCCCCCeEEEEECCCCCCCEEEEEeCC-----CcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccccc
Confidence 766544433222233333 3 6677888765 4678888876521111000 111111122211
Q ss_pred ----CCEEEEEecCCCCCCCCeEEEEeCCC--CeEEEcCCCCCCCcceEEEEE--C---CEEEEEecccCCCccccEEEE
Q 007704 498 ----NGKLYALGGFDGSAMVPSIEVYDPRL--GSWMSGEPMKLSRGYLGAAVV--K---EAIYVIGGVKNGSEIVDTVER 566 (592)
Q Consensus 498 ----~~~Lyv~GG~~~~~~~~~v~~yD~~t--~~W~~v~~lp~~R~~~s~~v~--~---~~Iyv~GG~~~~~~~~~~v~~ 566 (592)
++.+++.|+.++ .+.+||..+ ..+..+..+.........+.+ + +.+++.||.++ .|.+
T Consensus 165 ~~~~d~~~l~sgs~dg-----~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg------~I~i 233 (753)
T 3jro_A 165 NGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR------TCII 233 (753)
T ss_dssp --CGGGCCEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSS------CEEE
T ss_pred ccCCCCCEEEEEECCC-----eEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCC------EEEE
Confidence 366788887654 367777654 345544333322222333333 3 67888888654 3777
Q ss_pred EcCC
Q 007704 567 FKEG 570 (592)
Q Consensus 567 Yd~~ 570 (592)
||..
T Consensus 234 wd~~ 237 (753)
T 3jro_A 234 WTQD 237 (753)
T ss_dssp EEES
T ss_pred ecCC
Confidence 7765
No 60
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.33 E-value=0.17 Score=50.97 Aligned_cols=183 Identities=19% Similarity=0.175 Sum_probs=94.3
Q ss_pred CEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEEc
Q 007704 358 GELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRT 435 (592)
Q Consensus 358 ~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i 435 (592)
+.+++.|+.++ .+..+|..+.+......+........++.+ ++.+++.|+.+ ..+.++|..+++-...
T Consensus 48 ~~~l~tgs~D~-----~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D-----~~i~lWd~~~~~~~~~ 117 (321)
T 3ow8_A 48 SETVVTGSLDD-----LVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLD-----AHIRLWDLENGKQIKS 117 (321)
T ss_dssp -CEEEEEETTS-----CEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTTEEEEE
T ss_pred CCEEEEEcCCC-----CEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCC-----CcEEEEECCCCCEEEE
Confidence 55788888774 355556555544322222222222222333 55677777755 4788899988764332
Q ss_pred ccccCcccceEEEE-ECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCEEEEEecCCCCCCC
Q 007704 436 RSMLQKRFALAAAE-LNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGKLYALGGFDGSAMV 513 (592)
Q Consensus 436 ~~~p~~R~~~~a~~-~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~~~~~~ 513 (592)
-...... ..+++. -++..++.|+.+ ..+.+||..+..-...-.. ......+++.. +++.++.|+.++
T Consensus 118 ~~~~~~~-~~~~~~spdg~~l~~g~~d-----g~v~i~~~~~~~~~~~~~~-~~~~v~~~~~spdg~~lasg~~dg---- 186 (321)
T 3ow8_A 118 IDAGPVD-AWTLAFSPDSQYLATGTHV-----GKVNIFGVESGKKEYSLDT-RGKFILSIAYSPDGKYLASGAIDG---- 186 (321)
T ss_dssp EECCTTC-CCCEEECTTSSEEEEECTT-----SEEEEEETTTCSEEEEEEC-SSSCEEEEEECTTSSEEEEEETTS----
T ss_pred EeCCCcc-EEEEEECCCCCEEEEEcCC-----CcEEEEEcCCCceeEEecC-CCceEEEEEECCCCCEEEEEcCCC----
Confidence 1111111 111222 256677777654 4578888877653322111 11112222222 677888888664
Q ss_pred CeEEEEeCCCCeEEE-cCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 514 PSIEVYDPRLGSWMS-GEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 514 ~~v~~yD~~t~~W~~-v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.+.+||..+.+-.. +..-. ....+++.. ++.+++.|+.++ .|.+||..
T Consensus 187 -~i~iwd~~~~~~~~~~~~h~--~~v~~l~~spd~~~l~s~s~dg------~i~iwd~~ 236 (321)
T 3ow8_A 187 -IINIFDIATGKLLHTLEGHA--MPIRSLTFSPDSQLLVTASDDG------YIKIYDVQ 236 (321)
T ss_dssp -CEEEEETTTTEEEEEECCCS--SCCCEEEECTTSCEEEEECTTS------CEEEEETT
T ss_pred -eEEEEECCCCcEEEEEcccC--CceeEEEEcCCCCEEEEEcCCC------eEEEEECC
Confidence 58899998875433 22111 111222222 567777777653 37778765
No 61
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.29 E-value=0.18 Score=50.78 Aligned_cols=179 Identities=12% Similarity=0.137 Sum_probs=95.9
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
+++.++.|+.+ ..+..||..+.+-... +.........+.+ +++.++.|+.+ ..+.+||..+++-..
T Consensus 133 dg~~l~~g~~d-----g~v~i~~~~~~~~~~~--~~~~~~~v~~~~~spdg~~lasg~~d-----g~i~iwd~~~~~~~~ 200 (321)
T 3ow8_A 133 DSQYLATGTHV-----GKVNIFGVESGKKEYS--LDTRGKFILSIAYSPDGKYLASGAID-----GIINIFDIATGKLLH 200 (321)
T ss_dssp TSSEEEEECTT-----SEEEEEETTTCSEEEE--EECSSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCCEEEEEcCC-----CcEEEEEcCCCceeEE--ecCCCceEEEEEECCCCCEEEEEcCC-----CeEEEEECCCCcEEE
Confidence 56677777655 3577888876643221 1111111122222 67888888765 368899998876432
Q ss_pred cccccCcccc-eEEEE-ECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCEEEEEecCCCC
Q 007704 435 TRSMLQKRFA-LAAAE-LNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGKLYALGGFDGS 510 (592)
Q Consensus 435 i~~~p~~R~~-~~a~~-~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~Lyv~GG~~~~ 510 (592)
. +...... .+++. -++.+++.|+.+ ..+.+||+.+...... +......-..+.+ ++..++.|+.++
T Consensus 201 ~--~~~h~~~v~~l~~spd~~~l~s~s~d-----g~i~iwd~~~~~~~~~--~~~h~~~v~~~~~sp~~~~l~s~s~D~- 270 (321)
T 3ow8_A 201 T--LEGHAMPIRSLTFSPDSQLLVTASDD-----GYIKIYDVQHANLAGT--LSGHASWVLNVAFCPDDTHFVSSSSDK- 270 (321)
T ss_dssp E--ECCCSSCCCEEEECTTSCEEEEECTT-----SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-
T ss_pred E--EcccCCceeEEEEcCCCCEEEEEcCC-----CeEEEEECCCcceeEE--EcCCCCceEEEEECCCCCEEEEEeCCC-
Confidence 2 1111111 12222 266777888765 3578899887654322 1111111222333 677788888664
Q ss_pred CCCCeEEEEeCCCCeEEEcCCCCCCCcc-eEEEEE-CCEEEEEecccCCCccccEEEEEcC
Q 007704 511 AMVPSIEVYDPRLGSWMSGEPMKLSRGY-LGAAVV-KEAIYVIGGVKNGSEIVDTVERFKE 569 (592)
Q Consensus 511 ~~~~~v~~yD~~t~~W~~v~~lp~~R~~-~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~ 569 (592)
.+.+||..+.+-... +...... .+++.. ++..++.||.++ .|.+||.
T Consensus 271 ----~v~iwd~~~~~~~~~--~~~h~~~v~~v~~s~~g~~l~s~~~d~------~i~vwd~ 319 (321)
T 3ow8_A 271 ----SVKVWDVGTRTCVHT--FFDHQDQVWGVKYNGNGSKIVSVGDDQ------EIHIYDC 319 (321)
T ss_dssp ----CEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTC------CEEEEEC
T ss_pred ----cEEEEeCCCCEEEEE--EcCCCCcEEEEEECCCCCEEEEEeCCC------eEEEEeC
Confidence 588899887654332 1111122 223332 456777777653 3777773
No 62
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.27 E-value=0.35 Score=47.00 Aligned_cols=192 Identities=12% Similarity=0.133 Sum_probs=93.1
Q ss_pred EEECCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeEE
Q 007704 354 AMLNGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWI 433 (592)
Q Consensus 354 v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~ 433 (592)
+..++..++.|+.++ .+..||......... ....+.........++..++.|+.+ ..+.+||..... .
T Consensus 110 ~~~~~~~l~~~~~d~-----~i~~~d~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~-~ 177 (313)
T 3odt_A 110 LSFQDGVVISGSWDK-----TAKVWKEGSLVYNLQ-AHNASVWDAKVVSFSENKFLTASAD-----KTIKLWQNDKVI-K 177 (313)
T ss_dssp EEEETTEEEEEETTS-----EEEEEETTEEEEEEE-CCSSCEEEEEEEETTTTEEEEEETT-----SCEEEEETTEEE-E
T ss_pred EEecCCEEEEEeCCC-----CEEEEcCCcEEEecc-cCCCceeEEEEccCCCCEEEEEECC-----CCEEEEecCceE-E
Confidence 334666777777663 577788322222221 1111111112222267777777754 357788833221 1
Q ss_pred EcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCEEEEEecCCCCCC
Q 007704 434 RTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGKLYALGGFDGSAM 512 (592)
Q Consensus 434 ~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~~~~~ 512 (592)
................-++. ++.|+.+ ..+.+||+.+..-...-.. ......+++.. +++ ++.|+.+
T Consensus 178 ~~~~~~~~~i~~~~~~~~~~-~~~~~~d-----g~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~-l~~~~~d---- 245 (313)
T 3odt_A 178 TFSGIHNDVVRHLAVVDDGH-FISCSND-----GLIKLVDMHTGDVLRTYEG-HESFVYCIKLLPNGD-IVSCGED---- 245 (313)
T ss_dssp EECSSCSSCEEEEEEEETTE-EEEEETT-----SEEEEEETTTCCEEEEEEC-CSSCEEEEEECTTSC-EEEEETT----
T ss_pred EEeccCcccEEEEEEcCCCe-EEEccCC-----CeEEEEECCchhhhhhhhc-CCceEEEEEEecCCC-EEEEecC----
Confidence 11111112222222334667 6666654 4688999887653222111 11112223333 454 5666654
Q ss_pred CCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC-CcEEEccc
Q 007704 513 VPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG-QGWEEINS 578 (592)
Q Consensus 513 ~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~W~~v~~ 578 (592)
..+.+||..+......-..+.. ...+++.. ++. ++.|+.++ .|.+||.. ..|.....
T Consensus 246 -g~v~iwd~~~~~~~~~~~~~~~-~i~~~~~~~~~~-~~~~~~dg------~i~iw~~~~~~~~~~~~ 304 (313)
T 3odt_A 246 -RTVRIWSKENGSLKQVITLPAI-SIWSVDCMSNGD-IIVGSSDN------LVRIFSQEKSRWASEDE 304 (313)
T ss_dssp -SEEEEECTTTCCEEEEEECSSS-CEEEEEECTTSC-EEEEETTS------CEEEEESCGGGCCC---
T ss_pred -CEEEEEECCCCceeEEEeccCc-eEEEEEEccCCC-EEEEeCCC------cEEEEeCCCCceeehhh
Confidence 3688999988765443222221 12223333 455 55576543 49999987 66654433
No 63
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.27 E-value=0.25 Score=50.77 Aligned_cols=191 Identities=15% Similarity=0.149 Sum_probs=98.1
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEE-----CCCCCCCCcceEEEEE--CC-EEEEEecCCCCcccceEEEEeCC
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTS-----RPSLNGTKGSLAGATI--DN-KIFAIGGGNGLECFSDVEMLDLD 428 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~-----l~~lp~~r~~~~~~~~--~~-~Iyv~GG~~~~~~~~~v~~yD~~ 428 (592)
++.+++.|+.+ ..+.+||..++.+.. +..+.........+.+ ++ .+++.|+.+ ..+.+||..
T Consensus 93 ~~~~l~s~s~d-----g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d-----g~i~iwd~~ 162 (402)
T 2aq5_A 93 NDNVIASGSED-----CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD-----NVILVWDVG 162 (402)
T ss_dssp CTTEEEEEETT-----SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT-----SCEEEEETT
T ss_pred CCCEEEEEeCC-----CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC-----CEEEEEECC
Confidence 56788888866 368888888764311 1111111112222333 33 577887755 368899999
Q ss_pred CCeEEEccc-ccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEec-cCCCCCceeEEEEE-CCEEEEE
Q 007704 429 IGKWIRTRS-MLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIA-NMNRRRGCHSLAVL-NGKLYAL 504 (592)
Q Consensus 429 t~~W~~i~~-~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~-~~p~~R~~~s~v~~-~~~Lyv~ 504 (592)
+++....-. ......-.+++.. ++.+++.|+.+ ..+.+||+.++.-...- ..........++.. ++.+++.
T Consensus 163 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 237 (402)
T 2aq5_A 163 TGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-----KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTT 237 (402)
T ss_dssp TTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-----SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEE
T ss_pred CCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-----CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEE
Confidence 886543211 1111112222222 66677777755 46899999987644322 11111111223322 7888777
Q ss_pred ecCCCCCCCCeEEEEeCCCCeE-EEcCCCCCCCcceEEEEE-C-CEEEEEecccCCCccccEEEEEcCC
Q 007704 505 GGFDGSAMVPSIEVYDPRLGSW-MSGEPMKLSRGYLGAAVV-K-EAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 505 GG~~~~~~~~~v~~yD~~t~~W-~~v~~lp~~R~~~s~~v~-~-~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
|.... .-..+.+||..+..- .....+.......+++.. + ..+++.|+.++ .|.+||..
T Consensus 238 g~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg------~i~i~d~~ 298 (402)
T 2aq5_A 238 GFSRM--SERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDS------SIRYFEIT 298 (402)
T ss_dssp EECTT--CCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCS------CEEEEEEC
T ss_pred eccCC--CCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCC------eEEEEEec
Confidence 72110 124688999876431 111111222223333333 3 45556665443 47788866
No 64
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.24 E-value=0.31 Score=47.79 Aligned_cols=183 Identities=14% Similarity=0.184 Sum_probs=98.0
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEE----ECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCC
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWT----SRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIG 430 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~----~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~ 430 (592)
++++++.|+ + ..+..||..+.... .+..... ......+.+ +++.++.|+.+ ..+.+||..+.
T Consensus 62 ~~~~l~~~~-d-----g~i~iw~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~ 129 (337)
T 1gxr_A 62 PTRHVYTGG-K-----GCVKVWDISHPGNKSPVSQLDCLNR-DNYIRSCKLLPDGCTLIVGGEA-----STLSIWDLAAP 129 (337)
T ss_dssp SSSEEEEEC-B-----SEEEEEETTSTTCCSCSEEEECSCT-TSBEEEEEECTTSSEEEEEESS-----SEEEEEECCCC
T ss_pred CCcEEEEcC-C-----CeEEEEECCCCCceeeeecccccCC-CCcEEEEEEcCCCCEEEEEcCC-----CcEEEEECCCC
Confidence 566777776 4 46888888765421 1111111 122222333 56777777644 47899999988
Q ss_pred eEEEcccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCEEEEEecC
Q 007704 431 KWIRTRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGKLYALGGF 507 (592)
Q Consensus 431 ~W~~i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~ 507 (592)
+......+...........+ ++..++.|+.+ ..+.+||+.+......-.... ....++... ++..++.|+.
T Consensus 130 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~v~~~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~ 203 (337)
T 1gxr_A 130 TPRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQTLVRQFQGHT-DGASCIDISNDGTKLWTGGL 203 (337)
T ss_dssp --EEEEEEECSSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSEEEEEET
T ss_pred CcceeeecccCCCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCceeeeeeccc-CceEEEEECCCCCEEEEEec
Confidence 75544333322222222222 56667777654 358899998876543321111 112222222 6667777775
Q ss_pred CCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 508 DGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 508 ~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+ ..+.+||..+..-...-.. .....+++.. ++..+++|+.++ .+.+||..
T Consensus 204 d-----g~i~~~d~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~~~------~i~~~~~~ 254 (337)
T 1gxr_A 204 D-----NTVRSWDLREGRQLQQHDF--TSQIFSLGYCPTGEWLAVGMESS------NVEVLHVN 254 (337)
T ss_dssp T-----SEEEEEETTTTEEEEEEEC--SSCEEEEEECTTSSEEEEEETTS------CEEEEETT
T ss_pred C-----CcEEEEECCCCceEeeecC--CCceEEEEECCCCCEEEEEcCCC------cEEEEECC
Confidence 4 3688999987754433222 2222233332 566777777543 37888865
No 65
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.21 E-value=0.78 Score=46.91 Aligned_cols=184 Identities=13% Similarity=0.134 Sum_probs=97.8
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
++.+++.|+.++ .+..||..+.+-...- ......-.++.+ ++++++.|+.+ ..+.+||..+.+-..
T Consensus 108 ~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~s~d-----~~i~iwd~~~~~~~~ 175 (420)
T 3vl1_A 108 QMRRFILGTTEG-----DIKVLDSNFNLQREID--QAHVSEITKLKFFPSGEALISSSQD-----MQLKIWSVKDGSNPR 175 (420)
T ss_dssp SSCEEEEEETTS-----CEEEECTTSCEEEEET--TSSSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCCCE
T ss_pred CCCEEEEEECCC-----CEEEEeCCCcceeeec--ccccCccEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCcCce
Confidence 677888888663 5888998877654431 111222222333 67777777754 468899987664211
Q ss_pred cccccC-cccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEe-ccC-CCCCceeEEEE--------------
Q 007704 435 TRSMLQ-KRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKI-ANM-NRRRGCHSLAV-------------- 496 (592)
Q Consensus 435 i~~~p~-~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i-~~~-p~~R~~~s~v~-------------- 496 (592)
.+.. ...-.+++.. ++..++.|+.+ ..+.+||+.++.-... ... .......+++.
T Consensus 176 --~~~~h~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 248 (420)
T 3vl1_A 176 --TLIGHRATVTDIAIIDRGRNVLSASLD-----GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTS 248 (420)
T ss_dssp --EEECCSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCC
T ss_pred --EEcCCCCcEEEEEEcCCCCEEEEEcCC-----CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccC
Confidence 1111 1111222233 56666777765 3578899887754332 111 11111111111
Q ss_pred --------ECCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCE-EEEEecccCCCccccEEEE
Q 007704 497 --------LNGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEA-IYVIGGVKNGSEIVDTVER 566 (592)
Q Consensus 497 --------~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~-Iyv~GG~~~~~~~~~~v~~ 566 (592)
-++.+++.|+.++ .+.+||..+..-...-.........+++.. ++. +++.|+.+ ..|.+
T Consensus 249 ~v~~~~~s~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d------g~i~v 317 (420)
T 3vl1_A 249 KKNNLEFGTYGKYVIAGHVSG-----VITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYEN------GMLAQ 317 (420)
T ss_dssp CCCTTCSSCTTEEEEEEETTS-----CEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETT------SEEEE
T ss_pred cccceEEcCCCCEEEEEcCCC-----eEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCC------CeEEE
Confidence 1577788887654 488999887653322111112222233332 344 66667754 34888
Q ss_pred EcCC
Q 007704 567 FKEG 570 (592)
Q Consensus 567 Yd~~ 570 (592)
||..
T Consensus 318 wd~~ 321 (420)
T 3vl1_A 318 WDLR 321 (420)
T ss_dssp EETT
T ss_pred EEcC
Confidence 8875
No 66
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.18 E-value=0.053 Score=61.78 Aligned_cols=198 Identities=13% Similarity=0.134 Sum_probs=108.5
Q ss_pred CEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--C--CEEEEEecCCCCcccceEEEEeCCCCeEE
Q 007704 358 GELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--D--NKIFAIGGGNGLECFSDVEMLDLDIGKWI 433 (592)
Q Consensus 358 ~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~--~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~ 433 (592)
+..++.||.++ .+.+||..++.|..+..+........++.+ + +.+++.|+.+ ..+.+||..+..-.
T Consensus 67 ~~~l~s~s~Dg-----~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d-----g~I~vwdl~~~~~~ 136 (753)
T 3jro_A 67 GTILASCSYDG-----KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKENGTT 136 (753)
T ss_dssp CSEEEEEETTS-----CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCSSSCC
T ss_pred CCEEEEEeCCC-----eEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC-----CcEEEEEeecCCCc
Confidence 67888888763 588899999988766544433333344444 3 6788888755 36788888765221
Q ss_pred EcccccC-cccceEEEEE--------------CCEEEEEeccCCCCCCCeeEEEeCCCC--eEEEeccCCCCCceeEEEE
Q 007704 434 RTRSMLQ-KRFALAAAEL--------------NGVLYATGGYDGNEYMNSAERFDPREH--YWTKIANMNRRRGCHSLAV 496 (592)
Q Consensus 434 ~i~~~p~-~R~~~~a~~~--------------~g~IYV~GG~~~~~~~~~v~~yD~~t~--~W~~i~~~p~~R~~~s~v~ 496 (592)
....+.. ...-.+++.. ++.+++.|+.++ .+.+||..+. .+..+..+......-..+.
T Consensus 137 ~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg-----~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~ 211 (753)
T 3jro_A 137 SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVA 211 (753)
T ss_dssp CCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEEE
T ss_pred ceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCC-----eEEEEeccCCcccceeeeeecCCCCcEEEEE
Confidence 1101100 1111111111 356777777653 4777776554 4554443332222223333
Q ss_pred E--C---CEEEEEecCCCCCCCCeEEEEeCCCCe--EEE-cCCC-CCCCcceEEEEE-CCEEEEEecccCCCccccEEEE
Q 007704 497 L--N---GKLYALGGFDGSAMVPSIEVYDPRLGS--WMS-GEPM-KLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVER 566 (592)
Q Consensus 497 ~--~---~~Lyv~GG~~~~~~~~~v~~yD~~t~~--W~~-v~~l-p~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~ 566 (592)
+ + +.+++.||.++ .+.+||..+.. +.. +... .......+++.. ++..++.||.++ .|.+
T Consensus 212 ~sp~~~~~~~l~s~s~Dg-----~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg------~I~v 280 (753)
T 3jro_A 212 WSPTVLLRSYLASVSQDR-----TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN------KVTL 280 (753)
T ss_dssp ECCCCSSSEEEEEEESSS-----CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSS------CEEC
T ss_pred eccCCCCCCEEEEEecCC-----EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCC------EEEE
Confidence 3 4 78889988764 47778876642 211 1111 111112223332 567777787654 3888
Q ss_pred EcCC--CcEEEccccCC
Q 007704 567 FKEG--QGWEEINSRAI 581 (592)
Q Consensus 567 Yd~~--~~W~~v~~~p~ 581 (592)
||.. ..|........
T Consensus 281 wd~~~~~~~~~~~~~~~ 297 (753)
T 3jro_A 281 WKENLEGKWEPAGEVHQ 297 (753)
T ss_dssp CBCCSSSCCBCCCCBC-
T ss_pred EecCCCCCccccccccc
Confidence 8876 77877755443
No 67
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.13 E-value=0.31 Score=46.72 Aligned_cols=183 Identities=14% Similarity=0.036 Sum_probs=99.9
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE-CCEEEEEecCCCCcccceEEEEeCCCCeEEEc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI-DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRT 435 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i 435 (592)
++.||+... + +.+++||+.+........... ..-..++.. +++||+.... ...+.+||..+......
T Consensus 77 ~g~l~v~~~-~-----~~i~~~d~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~ 144 (270)
T 1rwi_B 77 AGTVYVTDF-N-----NRVVTLAAGSNNQTVLPFDGL-NYPEGLAVDTQGAVYVADRG-----NNRVVKLAAGSKTQTVL 144 (270)
T ss_dssp TCCEEEEET-T-----TEEEEECTTCSCCEECCCCSC-SSEEEEEECTTCCEEEEEGG-----GTEEEEECTTCCSCEEC
T ss_pred CCCEEEEcC-C-----CEEEEEeCCCceEeeeecCCc-CCCcceEECCCCCEEEEECC-----CCEEEEEECCCceeEee
Confidence 567888754 2 468999988876554432111 122233333 6789987542 24688888776654433
Q ss_pred ccccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCEEEEEecCCCCCCC
Q 007704 436 RSMLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGKLYALGGFDGSAMV 513 (592)
Q Consensus 436 ~~~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~~~~~~ 513 (592)
..... ..-..++.. ++++|+....+ ..+.+||+.+..-........ ..-.+++.- ++.||+....+
T Consensus 145 ~~~~~-~~p~~i~~~~~g~l~v~~~~~-----~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~~~----- 212 (270)
T 1rwi_B 145 PFTGL-NDPDGVAVDNSGNVYVTDTDN-----NRVVKLEAESNNQVVLPFTDI-TAPWGIAVDEAGTVYVTEHNT----- 212 (270)
T ss_dssp CCCSC-CSCCCEEECTTCCEEEEEGGG-----TEEEEECTTTCCEEECCCSSC-CSEEEEEECTTCCEEEEETTT-----
T ss_pred ccccC-CCceeEEEeCCCCEEEEECCC-----CEEEEEecCCCceEeecccCC-CCceEEEECCCCCEEEEECCC-----
Confidence 21111 111223333 57888876432 578999998776443321111 222233333 56888876422
Q ss_pred CeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 514 PSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 514 ~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+.+.+||+....-..... .......++++- ++.||+....+ +.|.+|+..
T Consensus 213 ~~v~~~~~~~~~~~~~~~-~~~~~p~~i~~~~~g~l~v~~~~~------~~v~~~~~~ 263 (270)
T 1rwi_B 213 NQVVKLLAGSTTSTVLPF-TGLNTPLAVAVDSDRTVYVADRGN------DRVVKLTSL 263 (270)
T ss_dssp SCEEEECTTCSCCEECCC-CSCSCEEEEEECTTCCEEEEEGGG------TEEEEECCC
T ss_pred CcEEEEcCCCCcceeecc-CCCCCceeEEECCCCCEEEEECCC------CEEEEEcCC
Confidence 358899987654333221 111222333333 46788876653 568888864
No 68
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.09 E-value=0.37 Score=49.62 Aligned_cols=185 Identities=14% Similarity=0.152 Sum_probs=98.6
Q ss_pred ECCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE-CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 356 LNGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI-DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 356 ~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
..+.-++.||.+ ..+..||..+++............-.+++.. +++++++|+.+ ..+.+||..+++...
T Consensus 101 ~s~~~l~~~~~d-----~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~ 170 (401)
T 4aez_A 101 WSNLNVVAVALE-----RNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN-----GLVDIYDVESQTKLR 170 (401)
T ss_dssp ECTTSEEEEEET-----TEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEE
T ss_pred ecCCCEEEEECC-----CeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC-----CeEEEEECcCCeEEE
Confidence 333334555544 4689999998887655333222222222222 67788888754 368899998876433
Q ss_pred cccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCe--EEEeccCCCCCceeEEEEE-CCEEEEEecCCCCC
Q 007704 435 TRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHY--WTKIANMNRRRGCHSLAVL-NGKLYALGGFDGSA 511 (592)
Q Consensus 435 i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~--W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~~~~ 511 (592)
. +............++.+++.|+.+ ..+.+||+.... -..+.. ......++... ++.+++.|+.++
T Consensus 171 ~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~d~-- 239 (401)
T 4aez_A 171 T--MAGHQARVGCLSWNRHVLSSGSRS-----GAIHHHDVRIANHQIGTLQG--HSSEVCGLAWRSDGLQLASGGNDN-- 239 (401)
T ss_dssp E--ECCCSSCEEEEEEETTEEEEEETT-----SEEEEEETTSSSCEEEEEEC--CSSCEEEEEECTTSSEEEEEETTS--
T ss_pred E--ecCCCCceEEEEECCCEEEEEcCC-----CCEEEEecccCcceeeEEcC--CCCCeeEEEEcCCCCEEEEEeCCC--
Confidence 2 111112222333466677777765 468889987432 112211 11122223222 677888888654
Q ss_pred CCCeEEEEeCCCCeEEE-cCCCCCCCcceEEEEE--CCEEEEEecccCCCccccEEEEEcCC
Q 007704 512 MVPSIEVYDPRLGSWMS-GEPMKLSRGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 512 ~~~~v~~yD~~t~~W~~-v~~lp~~R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.+.+||..+..-.. +.. ......+++.. +..+++.||...+ ..+.+||..
T Consensus 240 ---~v~iwd~~~~~~~~~~~~--~~~~v~~~~~~p~~~~ll~~~~gs~d----~~i~i~d~~ 292 (401)
T 4aez_A 240 ---VVQIWDARSSIPKFTKTN--HNAAVKAVAWCPWQSNLLATGGGTMD----KQIHFWNAA 292 (401)
T ss_dssp ---CEEEEETTCSSEEEEECC--CSSCCCEEEECTTSTTEEEEECCTTT----CEEEEEETT
T ss_pred ---eEEEccCCCCCccEEecC--CcceEEEEEECCCCCCEEEEecCCCC----CEEEEEECC
Confidence 58899988754332 211 11122233333 3467777752222 458888875
No 69
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.09 E-value=1.3 Score=43.90 Aligned_cols=191 Identities=12% Similarity=0.028 Sum_probs=98.4
Q ss_pred CCEEEEEeeCCC-CCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECC-EEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDG-NSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDN-KIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~-~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~-~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
++.+|+...... ....+.++.+|+.+.+....-.... +.......-++ .+|+.++.+ ..+++||+.+++-..
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~~ 125 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL-KPFGATINNTTQTLWFGNTVN-----SAVTAIDAKTGEVKG 125 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS-CCCSEEEETTTTEEEEEETTT-----TEEEEEETTTCCEEE
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC-CcceEEECCCCCEEEEEecCC-----CEEEEEeCCCCeeEE
Confidence 356777653221 1124679999999876543211111 11222233344 578776533 479999999887533
Q ss_pred cccccCc--------ccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCEEE
Q 007704 435 TRSMLQK--------RFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGKLY 502 (592)
Q Consensus 435 i~~~p~~--------R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~Ly 502 (592)
.-+.... ..-+.++.. ++.+|+.+... ...++++|+.+..-...-+.. ....+.++.. ++.||
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~ 200 (353)
T 3vgz_A 126 RLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAIQNT-GKMSTGLALDSEGKRLY 200 (353)
T ss_dssp EEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEECCC-CTTCCCCEEETTTTEEE
T ss_pred EEecCCCccccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEecCC-CCccceEEECCCCCEEE
Confidence 2122111 112233333 45678776322 246899999887644332211 1112223333 44566
Q ss_pred EEecCCCCCCCCeEEEEeCCCCeEEEcCCC---CCCCcceEEEEE--CCEEEEEecccCCCccccEEEEEcCC
Q 007704 503 ALGGFDGSAMVPSIEVYDPRLGSWMSGEPM---KLSRGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 503 v~GG~~~~~~~~~v~~yD~~t~~W~~v~~l---p~~R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+... -..+.+||+.+.+-...-.. .......+++.. ++.+|+.+... +.|++||+.
T Consensus 201 ~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------~~v~~~d~~ 261 (353)
T 3vgz_A 201 TTNA------DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKA------AEVLVVDTR 261 (353)
T ss_dssp EECT------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSS------SEEEEEETT
T ss_pred EEcC------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCC------CEEEEEECC
Confidence 6543 24788999988764432211 111222234444 34576655321 569999986
No 70
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.05 E-value=0.61 Score=45.89 Aligned_cols=163 Identities=10% Similarity=0.070 Sum_probs=82.9
Q ss_pred CEEEEEecCCCCcccceEEEEeCCC-CeEEEcc--cccCc-ccceEEEEE--C-CEEEEEeccCCCCCCCeeEEEeCC--
Q 007704 405 NKIFAIGGGNGLECFSDVEMLDLDI-GKWIRTR--SMLQK-RFALAAAEL--N-GVLYATGGYDGNEYMNSAERFDPR-- 475 (592)
Q Consensus 405 ~~Iyv~GG~~~~~~~~~v~~yD~~t-~~W~~i~--~~p~~-R~~~~a~~~--~-g~IYV~GG~~~~~~~~~v~~yD~~-- 475 (592)
..||+.+.. ...+.+||+.+ ++...+. ..... ......+.+ + ..+|+.+..+ ..+.+||+.
T Consensus 141 ~~l~~~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~-----~~i~~~~~~~~ 210 (343)
T 1ri6_A 141 RTLWVPALK-----QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN-----SSVDVWELKDP 210 (343)
T ss_dssp SEEEEEEGG-----GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT-----TEEEEEESSCT
T ss_pred CEEEEecCC-----CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCC-----CEEEEEEecCC
Confidence 357766522 24688999987 6665432 11111 112222223 3 3577776432 467888884
Q ss_pred CCeEEE---eccCCCC---CceeEEEEE--CC-EEEEEecCCCCCCCCeEEEEeCC--CCeEEEcCCCCCCCcceEEEEE
Q 007704 476 EHYWTK---IANMNRR---RGCHSLAVL--NG-KLYALGGFDGSAMVPSIEVYDPR--LGSWMSGEPMKLSRGYLGAAVV 544 (592)
Q Consensus 476 t~~W~~---i~~~p~~---R~~~s~v~~--~~-~Lyv~GG~~~~~~~~~v~~yD~~--t~~W~~v~~lp~~R~~~s~~v~ 544 (592)
++.+.. +...+.. ......+.+ ++ .||+.+..+ ..+.+||.. +.+++.+..++.......++..
T Consensus 211 ~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s 285 (343)
T 1ri6_A 211 HGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA-----SLITVFSVSEDGSVLSKEGFQPTETQPRGFNVD 285 (343)
T ss_dssp TSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT-----TEEEEEEECTTSCCEEEEEEEECSSSCCCEEEC
T ss_pred CCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCC-----CEEEEEEEcCCCCceEEeeeecCCCccceEEEC
Confidence 454432 2333322 112223333 34 676665432 468888877 5567666544333222233333
Q ss_pred -CC-EEEEEecccCCCccccEEEEE--cCC-CcEEEccccCCCCccceE
Q 007704 545 -KE-AIYVIGGVKNGSEIVDTVERF--KEG-QGWEEINSRAIGKRCFMS 588 (592)
Q Consensus 545 -~~-~Iyv~GG~~~~~~~~~~v~~Y--d~~-~~W~~v~~~p~~~r~~~s 588 (592)
++ .+|+.++.+ +.+.+| |++ ..+..+...+.+..-.+.
T Consensus 286 ~dg~~l~~~~~~~------~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i 328 (343)
T 1ri6_A 286 HSGKYLIAAGQKS------HHISVYEIVGEQGLLHEKGRYAVGQGPMWV 328 (343)
T ss_dssp TTSSEEEEECTTT------CEEEEEEEETTTTEEEEEEEEECSSSCCEE
T ss_pred CCCCEEEEecCCC------CeEEEEEEcCCCceeeEccccccCCCCeeE
Confidence 34 455544332 335555 776 778888777765444333
No 71
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.04 E-value=0.21 Score=51.65 Aligned_cols=190 Identities=12% Similarity=0.014 Sum_probs=95.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE-CCEEEEEecCCCCc---ccceEEEEeCCCCeE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI-DNKIFAIGGGNGLE---CFSDVEMLDLDIGKW 432 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~Iyv~GG~~~~~---~~~~v~~yD~~t~~W 432 (592)
+..+|+.|+.+ ..+.+||+.+.+....-.. ...-..++.. +++.+++++..... .-..+.+||+.+++-
T Consensus 223 ~~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~ 295 (433)
T 3bws_A 223 RDLVYCSNWIS-----EDISVIDRKTKLEIRKTDK--IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL 295 (433)
T ss_dssp TTEEEEEETTT-----TEEEEEETTTTEEEEECCC--CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE
T ss_pred CCEEEEEecCC-----CcEEEEECCCCcEEEEecC--CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE
Confidence 44566666544 3689999998876543222 2222222222 55444454432111 134789999988865
Q ss_pred EEcccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCEEEEEecCCC
Q 007704 433 IRTRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGKLYALGGFDG 509 (592)
Q Consensus 433 ~~i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~~ 509 (592)
...-..+. .-..++.. ++.+|+.++.+ ..+.+||+.++.-...- +......+++.. +++.+++++...
T Consensus 296 ~~~~~~~~--~~~~~~~~~~g~~l~~~~~~~-----~~v~v~d~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~~~~ 366 (433)
T 3bws_A 296 IDTIGPPG--NKRHIVSGNTENKIYVSDMCC-----SKIEVYDLKEKKVQKSI--PVFDKPNTIALSPDGKYLYVSCRGP 366 (433)
T ss_dssp EEEEEEEE--CEEEEEECSSTTEEEEEETTT-----TEEEEEETTTTEEEEEE--ECSSSEEEEEECTTSSEEEEEECCC
T ss_pred EeeccCCC--CcceEEECCCCCEEEEEecCC-----CEEEEEECCCCcEEEEe--cCCCCCCeEEEcCCCCEEEEEecCC
Confidence 43321111 11122222 34788887654 47899999877643322 122222233333 454344443321
Q ss_pred CC----------CCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcC
Q 007704 510 SA----------MVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKE 569 (592)
Q Consensus 510 ~~----------~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~ 569 (592)
.. .-..+++||+.+.+....-.. .....+++.. +++.+++++..+ ..+.+|+.
T Consensus 367 ~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~d-----~~i~v~~~ 430 (433)
T 3bws_A 367 NHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA--GNQPTGLDVSPDNRYLVISDFLD-----HQIRVYRR 430 (433)
T ss_dssp CCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSCEEEEEETTT-----TEEEEEEE
T ss_pred CccccccccccccceEEEEEECCCCcEEEEecC--CCCCceEEEcCCCCEEEEEECCC-----CeEEEEEe
Confidence 11 123799999988765543211 2222233332 455545554322 45888876
No 72
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.03 E-value=0.66 Score=48.42 Aligned_cols=143 Identities=14% Similarity=0.072 Sum_probs=80.2
Q ss_pred EECCEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEE
Q 007704 402 TIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWT 480 (592)
Q Consensus 402 ~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~ 480 (592)
..++.+++.|+.+ ..+.+||..+.+-...-..... .-.+++.. ++..++.|+.+ ..+.+||+.++.-.
T Consensus 277 ~~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 277 SGHGNIVVSGSYD-----NTLIVWDVAQMKCLYILSGHTD-RIYSTIYDHERKRCISASMD-----TTIRIWDLENGELM 345 (464)
T ss_dssp EEETTEEEEEETT-----SCEEEEETTTTEEEEEECCCSS-CEEEEEEETTTTEEEEEETT-----SCEEEEETTTTEEE
T ss_pred cCCCCEEEEEeCC-----CeEEEEECCCCcEEEEecCCCC-CEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCcEE
Confidence 4466677777755 3688999987754332111111 11222222 55666777755 35889999887533
Q ss_pred EeccCCCCCceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCCCcc
Q 007704 481 KIANMNRRRGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEI 560 (592)
Q Consensus 481 ~i~~~p~~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~ 560 (592)
. .+.........+.+++..++.|+.++ .+.+||+.+..-...... .......+...++.+++.|+ +
T Consensus 346 ~--~~~~h~~~v~~~~~~~~~l~s~s~dg-----~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-d----- 411 (464)
T 3v7d_B 346 Y--TLQGHTALVGLLRLSDKFLVSAAADG-----SIRGWDANDYSRKFSYHH-TNLSAITTFYVSDNILVSGS-E----- 411 (464)
T ss_dssp E--EECCCSSCEEEEEECSSEEEEEETTS-----EEEEEETTTCCEEEEEEC-TTCCCEEEEEECSSEEEEEE-T-----
T ss_pred E--EEeCCCCcEEEEEEcCCEEEEEeCCC-----cEEEEECCCCceeeeecC-CCCccEEEEEeCCCEEEEec-C-----
Confidence 2 22222223344555677778887653 588999887543222111 11122233445677777776 2
Q ss_pred ccEEEEEcCC
Q 007704 561 VDTVERFKEG 570 (592)
Q Consensus 561 ~~~v~~Yd~~ 570 (592)
..|.+||..
T Consensus 412 -g~i~iwd~~ 420 (464)
T 3v7d_B 412 -NQFNIYNLR 420 (464)
T ss_dssp -TEEEEEETT
T ss_pred -CeEEEEECC
Confidence 458999976
No 73
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.03 E-value=0.053 Score=54.35 Aligned_cols=200 Identities=17% Similarity=0.239 Sum_probs=101.2
Q ss_pred CEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--C--CEEEEEecCCCCcccceEEEEeCCCC-eE
Q 007704 358 GELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--D--NKIFAIGGGNGLECFSDVEMLDLDIG-KW 432 (592)
Q Consensus 358 ~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~--~~Iyv~GG~~~~~~~~~v~~yD~~t~-~W 432 (592)
+.+++.|+.+ ..+..||..+..|..+..+......-..+.+ + +.+++.|+.+ ..+.++|..+. .|
T Consensus 71 ~~~l~s~s~D-----~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D-----~~i~lwd~~~~~~~ 140 (316)
T 3bg1_A 71 GNILASCSYD-----RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD-----GAISLLTYTGEGQW 140 (316)
T ss_dssp SSCEEEEETT-----SCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSS-----SCEEEEEECSSSCE
T ss_pred CCEEEEEECC-----CEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCC-----CCEEEEecCCCCCc
Confidence 6777788866 3578889888766443222222222222333 2 5677777755 35677777664 56
Q ss_pred EEcccccCcccceEEEEE-------------------CCEEEEEeccCCCCCCCeeEEEeCCC-CeEEEeccCCCCCcee
Q 007704 433 IRTRSMLQKRFALAAAEL-------------------NGVLYATGGYDGNEYMNSAERFDPRE-HYWTKIANMNRRRGCH 492 (592)
Q Consensus 433 ~~i~~~p~~R~~~~a~~~-------------------~g~IYV~GG~~~~~~~~~v~~yD~~t-~~W~~i~~~p~~R~~~ 492 (592)
.....+.........+.+ .+++++.||.+ ..+.+||..+ ..|..+..+......-
T Consensus 141 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D-----~~v~lWd~~~~~~~~~~~~l~~h~~~V 215 (316)
T 3bg1_A 141 EVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCD-----NLIKLWKEEEDGQWKEEQKLEAHSDWV 215 (316)
T ss_dssp EECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTT-----SBCCEEEECTTSCEEEEECCBCCSSCE
T ss_pred ceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCC-----CeEEEEEeCCCCccceeeecccCCCce
Confidence 543221110000000001 13466667655 3456677663 4576665443222222
Q ss_pred EEEEE--C----CEEEEEecCCCCCCCCeEEEEeCCC---CeEEE--cCCCCCCCcceEEEEE-CCEEEEEecccCCCcc
Q 007704 493 SLAVL--N----GKLYALGGFDGSAMVPSIEVYDPRL---GSWMS--GEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEI 560 (592)
Q Consensus 493 s~v~~--~----~~Lyv~GG~~~~~~~~~v~~yD~~t---~~W~~--v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~ 560 (592)
..+.+ + +.+++.|+.++ .+.++|..+ ..|.. +... .....+++.. ++.+++.||.++
T Consensus 216 ~~v~~sp~~~~~~~~las~s~D~-----~v~iw~~~~~~~~~~~~~~~~~~--~~~v~~v~~sp~g~~las~~~D~---- 284 (316)
T 3bg1_A 216 RDVAWAPSIGLPTSTIASCSQDG-----RVFIWTCDDASSNTWSPKLLHKF--NDVVWHVSWSITANILAVSGGDN---- 284 (316)
T ss_dssp EEEECCCCSSCSCCEEEEEETTC-----EEEEEECSSTTCCCCBCCEEEEC--SSCEEEEEECTTTCCEEEEESSS----
T ss_pred EEEEecCCCCCCCceEEEEcCCC-----eEEEEEccCccccchhhhhhhcC--CCcEEEEEEcCCCCEEEEEcCCC----
Confidence 22333 2 26777887664 577787765 23321 1111 1111222222 567778888654
Q ss_pred ccEEEEEcCC--CcEEEccccCCCCcc
Q 007704 561 VDTVERFKEG--QGWEEINSRAIGKRC 585 (592)
Q Consensus 561 ~~~v~~Yd~~--~~W~~v~~~p~~~r~ 585 (592)
.|.+|+.. ..|..+..+.-+.-+
T Consensus 285 --~v~lw~~~~~g~~~~~~~~~~~~~~ 309 (316)
T 3bg1_A 285 --KVTLWKESVDGQWVCISDVNKGQGS 309 (316)
T ss_dssp --CEEEEEECTTSCEEEEEECC-----
T ss_pred --eEEEEEECCCCcEEEeeeccCCCCc
Confidence 37777755 789998777655433
No 74
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.02 E-value=0.63 Score=46.46 Aligned_cols=196 Identities=13% Similarity=0.135 Sum_probs=98.2
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCe-EE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGK-WI 433 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~-W~ 433 (592)
++.+++.|+.++ .+..||..+.++.....+.........+.+ +++.++.|+.+ ..+.+||..+.. |.
T Consensus 63 ~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i~d~~~~~~~~ 132 (372)
T 1k8k_C 63 DSNRIVTCGTDR-----NAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS-----RVISICYFEQENDWW 132 (372)
T ss_dssp TTTEEEEEETTS-----CEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETT-----SSEEEEEEETTTTEE
T ss_pred CCCEEEEEcCCC-----eEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCC-----CEEEEEEecCCCcce
Confidence 677788888653 588889888887654332222222233333 67777887754 346666665543 33
Q ss_pred EcccccCc--ccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCC----------------eEEEeccCCCCCceeEE
Q 007704 434 RTRSMLQK--RFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREH----------------YWTKIANMNRRRGCHSL 494 (592)
Q Consensus 434 ~i~~~p~~--R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~----------------~W~~i~~~p~~R~~~s~ 494 (592)
.......+ ..-.+++.. ++..++.|+.+ ..+.+||.... .-..+..+.........
T Consensus 133 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 207 (372)
T 1k8k_C 133 VCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD-----FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHG 207 (372)
T ss_dssp EEEEECTTCCSCEEEEEECTTSSEEEEEETT-----SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEE
T ss_pred eeeeeecccCCCeeEEEEcCCCCEEEEEcCC-----CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEE
Confidence 32222111 111222222 56677777755 35778885411 11111112111111222
Q ss_pred EEE--CCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC-
Q 007704 495 AVL--NGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG- 570 (592)
Q Consensus 495 v~~--~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~- 570 (592)
+.+ ++..++.|+.+ ..+.+||..+..-...-.... ....+++.. ++.+++.| .++ .+.+||..
T Consensus 208 ~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~-~d~------~i~i~~~~~ 274 (372)
T 1k8k_C 208 VCFSANGSRVAWVSHD-----STVCLADADKKMAVATLASET-LPLLAVTFITESSLVAAG-HDC------FPVLFTYDS 274 (372)
T ss_dssp EEECSSSSEEEEEETT-----TEEEEEEGGGTTEEEEEECSS-CCEEEEEEEETTEEEEEE-TTS------SCEEEEEET
T ss_pred EEECCCCCEEEEEeCC-----CEEEEEECCCCceeEEEccCC-CCeEEEEEecCCCEEEEE-eCC------eEEEEEccC
Confidence 333 66677777754 358889987665332111111 112233333 66665555 332 35566643
Q ss_pred --CcEEEccccC
Q 007704 571 --QGWEEINSRA 580 (592)
Q Consensus 571 --~~W~~v~~~p 580 (592)
..|..+..+.
T Consensus 275 ~~~~~~~~~~~~ 286 (372)
T 1k8k_C 275 AAGKLSFGGRLD 286 (372)
T ss_dssp TTTEEEECCCCC
T ss_pred cCceEEEeeccC
Confidence 6688775543
No 75
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.01 E-value=0.17 Score=50.33 Aligned_cols=187 Identities=13% Similarity=0.128 Sum_probs=95.6
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
++++++.|+.++ .+.+||..+.+-... +.........+.+ +++.++.|+.+ ..+.+||..+++...
T Consensus 43 ~~~~l~~~~~dg-----~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~ 110 (369)
T 3zwl_B 43 EGDLLFSCSKDS-----SASVWYSLNGERLGT--LDGHTGTIWSIDVDCFTKYCVTGSAD-----YSIKLWDVSNGQCVA 110 (369)
T ss_dssp TSCEEEEEESSS-----CEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----TEEEEEETTTCCEEE
T ss_pred CCCEEEEEeCCC-----EEEEEeCCCchhhhh--hhhcCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcEEE
Confidence 677888887653 588899887654332 2222222223333 57777777754 478899998876544
Q ss_pred cccccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCe----EEEeccCC-------CCCceeEEEEE--CCE
Q 007704 435 TRSMLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHY----WTKIANMN-------RRRGCHSLAVL--NGK 500 (592)
Q Consensus 435 i~~~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~----W~~i~~~p-------~~R~~~s~v~~--~~~ 500 (592)
.-.. ...-.+++.. ++..++.++.+.......+.+||+.+.. +......+ ........+.+ ++.
T Consensus 111 ~~~~--~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (369)
T 3zwl_B 111 TWKS--PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGK 188 (369)
T ss_dssp EEEC--SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGC
T ss_pred Eeec--CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCC
Confidence 3221 1111222222 4555565554422223467777765432 22221111 11012223333 566
Q ss_pred EEEEecCCCCCCCCeEEEEeCCC-CeEEE-cCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 501 LYALGGFDGSAMVPSIEVYDPRL-GSWMS-GEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 501 Lyv~GG~~~~~~~~~v~~yD~~t-~~W~~-v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.++.|+.+ ..+.+||+.+ ..-.. +... .....+++.. ++..++.|+.+ ..|.+||..
T Consensus 189 ~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d------~~i~v~d~~ 248 (369)
T 3zwl_B 189 YIIAGHKD-----GKISKYDVSNNYEYVDSIDLH--EKSISDMQFSPDLTYFITSSRD------TNSFLVDVS 248 (369)
T ss_dssp EEEEEETT-----SEEEEEETTTTTEEEEEEECC--SSCEEEEEECTTSSEEEEEETT------SEEEEEETT
T ss_pred EEEEEcCC-----CEEEEEECCCCcEeEEEEecC--CCceeEEEECCCCCEEEEecCC------ceEEEEECC
Confidence 77777754 3688999987 33222 2211 1112222222 56666767654 347788865
No 76
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.96 E-value=1.3 Score=42.75 Aligned_cols=187 Identities=13% Similarity=0.094 Sum_probs=100.6
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE-CCEEEEEecCCCCcccceEEEEeCCCCeEEEc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI-DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRT 435 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i 435 (592)
++.+|+....+ +.+++||+. +++...........-+.++.. ++++|+.... ...+..||+. ++....
T Consensus 72 ~g~l~v~~~~~-----~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~ 139 (300)
T 2qc5_A 72 LGDIWFTENGA-----NKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLN-----GDRIGKLTAD-GTIYEY 139 (300)
T ss_dssp TSCEEEEETTT-----TEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETT-----TTEEEEECTT-SCEEEE
T ss_pred CCCEEEEecCC-----CeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccC-----CCeEEEECCC-CCEEEc
Confidence 57788865322 468999988 666544221111222333333 6789887532 2468899988 665543
Q ss_pred ccccCc-ccceEEEE-ECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCEEEEEecCCCCCC
Q 007704 436 RSMLQK-RFALAAAE-LNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGKLYALGGFDGSAM 512 (592)
Q Consensus 436 ~~~p~~-R~~~~a~~-~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~~~~~ 512 (592)
. ++.. ..-..++. -++++|+.... ...+++||+ ++.+..+...........++.- ++.||+....
T Consensus 140 ~-~~~~~~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~----- 207 (300)
T 2qc5_A 140 D-LPNKGSYPAFITLGSDNALWFTENQ-----NNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIM----- 207 (300)
T ss_dssp E-CSSTTCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETT-----
T ss_pred c-CCCCCCCceeEEECCCCCEEEEecC-----CCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccC-----
Confidence 2 2211 12222332 25678886532 246899999 6666654321111222233333 6778886432
Q ss_pred CCeEEEEeCCCCeEEEcCCCCCC-CcceEEEEE-CCEEEEEecccCCCccccEEEEEcCCCcEEE
Q 007704 513 VPSIEVYDPRLGSWMSGEPMKLS-RGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEGQGWEE 575 (592)
Q Consensus 513 ~~~v~~yD~~t~~W~~v~~lp~~-R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~~~W~~ 575 (592)
...+.+||+ +..+..... +.. ....+++.- ++.||+..... +.|.+||+......
T Consensus 208 ~~~i~~~~~-~g~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~~------~~i~~~~~~g~~~~ 264 (300)
T 2qc5_A 208 GNKIGRITT-TGEISEYDI-PTPNARPHAITAGKNSEIWFTEWGA------NQIGRITNDNTIQE 264 (300)
T ss_dssp TTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECSTTCEEEEETTT------TEEEEECTTSCEEE
T ss_pred CCEEEEEcC-CCcEEEEEC-CCCCCCceEEEECCCCCEEEeccCC------CeEEEECCCCcEEE
Confidence 246899998 566655421 211 122233332 56788865321 45888888644443
No 77
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.96 E-value=0.33 Score=47.84 Aligned_cols=196 Identities=13% Similarity=0.143 Sum_probs=98.1
Q ss_pred CEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--C--CEEEEEecCCCCcccceEEEEeCCCCe-E
Q 007704 358 GELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--D--NKIFAIGGGNGLECFSDVEMLDLDIGK-W 432 (592)
Q Consensus 358 ~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~--~~Iyv~GG~~~~~~~~~v~~yD~~t~~-W 432 (592)
+.+++.|+.+ ..+..||..+..|..+..+.........+.+ + +.+++.|+.+ ..+.+||..+.. +
T Consensus 67 g~~l~s~s~D-----~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d-----~~v~~wd~~~~~~~ 136 (297)
T 2pm7_B 67 GTILASCSYD-----GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD-----GKVSVVEFKENGTT 136 (297)
T ss_dssp CSEEEEEETT-----TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEEBCSSSCB
T ss_pred CCEEEEEcCC-----CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC-----CcEEEEEecCCCce
Confidence 6788888866 3678889888776544333222222233333 2 5677777755 367778876542 2
Q ss_pred EEcccccCcccceEEEE--------------ECCEEEEEeccCCCCCCCeeEEEeCCC--CeEEEeccCCCCCceeEEEE
Q 007704 433 IRTRSMLQKRFALAAAE--------------LNGVLYATGGYDGNEYMNSAERFDPRE--HYWTKIANMNRRRGCHSLAV 496 (592)
Q Consensus 433 ~~i~~~p~~R~~~~a~~--------------~~g~IYV~GG~~~~~~~~~v~~yD~~t--~~W~~i~~~p~~R~~~s~v~ 496 (592)
....-......-.+++. .++.+++.||.++ .+.+||..+ ..|.....+......-..+.
T Consensus 137 ~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~-----~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~ 211 (297)
T 2pm7_B 137 SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVA 211 (297)
T ss_dssp CCEEEECCSSCEEEEEECCCC------------CCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEEE
T ss_pred eeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCC-----cEEEEEEcCCCceEEEEEEecCCCCceEEEE
Confidence 10000000000001111 1245777777653 466676654 34654444432222223333
Q ss_pred E--C---CEEEEEecCCCCCCCCeEEEEeCCC--CeEEE--cCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEE
Q 007704 497 L--N---GKLYALGGFDGSAMVPSIEVYDPRL--GSWMS--GEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVER 566 (592)
Q Consensus 497 ~--~---~~Lyv~GG~~~~~~~~~v~~yD~~t--~~W~~--v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~ 566 (592)
+ + +.+++.|+.++ .+.++|..+ ..|.. +.....+....+++.. ++.+++.||.++ .|.+
T Consensus 212 ~sp~~~~~~~las~s~D~-----~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~------~v~l 280 (297)
T 2pm7_B 212 WSPTVLLRSYMASVSQDR-----TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN------KVTL 280 (297)
T ss_dssp ECCCCSSSEEEEEEETTS-----CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTS------CEEE
T ss_pred ECCCCCCceEEEEEECCC-----cEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCC------cEEE
Confidence 3 3 47888888764 466677654 34543 2111112222222222 577777787654 3667
Q ss_pred EcCC--CcEEEcccc
Q 007704 567 FKEG--QGWEEINSR 579 (592)
Q Consensus 567 Yd~~--~~W~~v~~~ 579 (592)
|+.. ..|..+..+
T Consensus 281 w~~~~~g~w~~~~~~ 295 (297)
T 2pm7_B 281 WKENLEGKWEPAGEV 295 (297)
T ss_dssp EEECTTSCEEEC---
T ss_pred EEECCCCcEEecccc
Confidence 7755 789887654
No 78
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.94 E-value=0.54 Score=47.80 Aligned_cols=184 Identities=14% Similarity=0.101 Sum_probs=93.2
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeEEEcc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTR 436 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~ 436 (592)
++..++.||.++ .+.+||..+......-..+..........-++..++.||.+ ..+.+|+.....-....
T Consensus 75 d~~~l~s~s~Dg-----~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d-----~~i~v~~~~~~~~~~~~ 144 (354)
T 2pbi_B 75 DKRRIVSSSQDG-----KVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD-----NKCSVYPLTFDKNENMA 144 (354)
T ss_dssp TSSEEEEEETTS-----EEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTT-----SEEEEEECCCCTTCCSG
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCC-----CCEEEEEEecccccccc
Confidence 667788888763 67888887765543322222211112222367888888865 35667766433100000
Q ss_pred c----ccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE----CCEEEEEec
Q 007704 437 S----MLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL----NGKLYALGG 506 (592)
Q Consensus 437 ~----~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~----~~~Lyv~GG 506 (592)
. +..-......+.+ ++..++.|+.+ ..+.+||+.++.-...-..... .-.++.+ ++.+++.|+
T Consensus 145 ~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D-----~~v~lwd~~~~~~~~~~~~h~~--~v~~~~~~~~~~g~~l~sgs 217 (354)
T 2pbi_B 145 AKKKSVAMHTNYLSACSFTNSDMQILTASGD-----GTCALWDVESGQLLQSFHGHGA--DVLCLDLAPSETGNTFVSGG 217 (354)
T ss_dssp GGCEEEEECSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCEEEEEECCSS--CEEEEEECCCSSCCEEEEEE
T ss_pred ccceeeeccCCcEEEEEEeCCCCEEEEEeCC-----CcEEEEeCCCCeEEEEEcCCCC--CeEEEEEEeCCCCCEEEEEe
Confidence 0 0000001112222 44455566544 4688899988764322111111 1112222 356888888
Q ss_pred CCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecccCCCccccEEEEEcCC
Q 007704 507 FDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 507 ~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.++ .+.+||..+......-. ........+.+ ++..++.|+.++ .|.+||..
T Consensus 218 ~Dg-----~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~p~~~~l~s~s~D~------~v~lwd~~ 270 (354)
T 2pbi_B 218 CDK-----KAMVWDMRSGQCVQAFE--THESDVNSVRYYPSGDAFASGSDDA------TCRLYDLR 270 (354)
T ss_dssp TTS-----CEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSEEEEEETTS------CEEEEETT
T ss_pred CCC-----eEEEEECCCCcEEEEec--CCCCCeEEEEEeCCCCEEEEEeCCC------eEEEEECC
Confidence 764 58889998876543211 11111222233 566777777653 37777765
No 79
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.88 E-value=0.41 Score=48.67 Aligned_cols=173 Identities=17% Similarity=0.208 Sum_probs=90.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE----CCEEEEEecCCCCcccceEEEEeCCCCeE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI----DNKIFAIGGGNGLECFSDVEMLDLDIGKW 432 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~----~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W 432 (592)
++..++.|+.+ ..+..||+.+.+.... +......-.++.+ ++..++.|+.+ ..+.+||+.+++.
T Consensus 165 ~~~~l~t~s~D-----~~v~lwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~g~~l~sgs~D-----g~v~~wd~~~~~~ 232 (354)
T 2pbi_B 165 SDMQILTASGD-----GTCALWDVESGQLLQS--FHGHGADVLCLDLAPSETGNTFVSGGCD-----KKAMVWDMRSGQC 232 (354)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEECCCSSCCEEEEEETT-----SCEEEEETTTCCE
T ss_pred CCCEEEEEeCC-----CcEEEEeCCCCeEEEE--EcCCCCCeEEEEEEeCCCCCEEEEEeCC-----CeEEEEECCCCcE
Confidence 34455556544 4678889887765322 1111111112222 35788888765 4688999988765
Q ss_pred EEcccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCEEEEEecCC
Q 007704 433 IRTRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGKLYALGGFD 508 (592)
Q Consensus 433 ~~i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~Lyv~GG~~ 508 (592)
...-... ...-.++.+ ++..++.|+.+ ..+.+||+.+..-...-...........+.+ ++.+++.|+.+
T Consensus 233 ~~~~~~h--~~~v~~v~~~p~~~~l~s~s~D-----~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d 305 (354)
T 2pbi_B 233 VQAFETH--ESDVNSVRYYPSGDAFASGSDD-----ATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYND 305 (354)
T ss_dssp EEEECCC--SSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred EEEecCC--CCCeEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECC
Confidence 4321111 111112222 56677778765 3578899887754332222222223334444 67777787755
Q ss_pred CCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccc
Q 007704 509 GSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV--KEAIYVIGGVK 555 (592)
Q Consensus 509 ~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~--~~~Iyv~GG~~ 555 (592)
+ .+.+||..+..-.. .+.........+.+ ++..++.|+.+
T Consensus 306 ~-----~i~vwd~~~~~~~~--~l~~h~~~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 306 Y-----TINVWDVLKGSRVS--ILFGHENRVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp S-----CEEEEETTTCSEEE--EECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred C-----cEEEEECCCCceEE--EEECCCCcEEEEEECCCCCEEEEEcCC
Confidence 3 58889986654221 11111122222223 56777777764
No 80
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.80 E-value=0.51 Score=52.56 Aligned_cols=188 Identities=15% Similarity=0.077 Sum_probs=101.5
Q ss_pred cceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCC-eEEEcccccCccc----c
Q 007704 372 HNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIG-KWIRTRSMLQKRF----A 444 (592)
Q Consensus 372 ~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~-~W~~i~~~p~~R~----~ 444 (592)
...++++|..+.+...+............+.+ +++.++++..+.......++++|+.++ .+..+........ .
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 313 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLH 313 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCS
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccC
Confidence 36799999999887666432222222223333 666555554443334568999999998 7765532111110 1
Q ss_pred eEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CC-EEEEEecCCCCCCCCeEEEE
Q 007704 445 LAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NG-KLYALGGFDGSAMVPSIEVY 519 (592)
Q Consensus 445 ~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~-~Lyv~GG~~~~~~~~~v~~y 519 (592)
.....- ++++++.+..++ ...++.+|........+..-.... ...+.+ ++ .||+.+..+ ......++.+
T Consensus 314 ~~~~sp~~dg~~l~~~~~~g---~~~l~~~~~~~~~~~~l~~~~~~v--~~~~~~spdg~~l~~~~~~~-~~~~~~l~~~ 387 (706)
T 2z3z_A 314 PLTFLPGSNNQFIWQSRRDG---WNHLYLYDTTGRLIRQVTKGEWEV--TNFAGFDPKGTRLYFESTEA-SPLERHFYCI 387 (706)
T ss_dssp CCEECTTCSSEEEEEECTTS---SCEEEEEETTSCEEEECCCSSSCE--EEEEEECTTSSEEEEEESSS-CTTCBEEEEE
T ss_pred CceeecCCCCEEEEEEccCC---ccEEEEEECCCCEEEecCCCCeEE--EeeeEEcCCCCEEEEEecCC-CCceEEEEEE
Confidence 112222 677666554432 367888887777777664322221 222334 44 565555432 2223579999
Q ss_pred eCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 520 DPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 520 D~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
|..+...+.+.. ....++++.. +++.+++...+. ..-..++++|..
T Consensus 388 d~~~~~~~~l~~---~~~~~~~~~spdg~~l~~~~~~~--~~p~~i~l~d~~ 434 (706)
T 2z3z_A 388 DIKGGKTKDLTP---ESGMHRTQLSPDGSAIIDIFQSP--TVPRKVTVTNIG 434 (706)
T ss_dssp ETTCCCCEESCC---SSSEEEEEECTTSSEEEEEEECS--SCSCEEEEEESS
T ss_pred EcCCCCceeccC---CCceEEEEECCCCCEEEEEecCC--CCCcEEEEEECC
Confidence 998877666652 2223333333 455555554322 122457888866
No 81
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.79 E-value=1 Score=42.80 Aligned_cols=198 Identities=13% Similarity=-0.044 Sum_probs=106.7
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCC-CeEEECCCCCCC-CcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPAN-DEWTSRPSLNGT-KGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t-~~W~~l~~lp~~-r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
+++.+++++. ..++.+|..+ .+...+...... ........-+++.+++++.... ....+|.+|..+.....
T Consensus 52 dg~~l~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~~~~~ 124 (297)
T 2ojh_A 52 DGKYLLLNSE------GLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEF-GKSAIYLLPSTGGTPRL 124 (297)
T ss_dssp TSSEEEEEET------TEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTT-SSCEEEEEETTCCCCEE
T ss_pred CCCEEEEEcC------CeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCC-CcceEEEEECCCCceEE
Confidence 6666666652 3799999998 877766443321 2222222336776666653221 34688999988877655
Q ss_pred cccccCcccceEEEEE-CC-EEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCEEEEEec-CCC
Q 007704 435 TRSMLQKRFALAAAEL-NG-VLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGKLYALGG-FDG 509 (592)
Q Consensus 435 i~~~p~~R~~~~a~~~-~g-~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~Lyv~GG-~~~ 509 (592)
+..... ....+.. ++ .|++.++.++. ..++.+|+.+.....+...+.. ...+.+ +++.+++++ .++
T Consensus 125 ~~~~~~---~~~~~~spdg~~l~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~~~~~~ 195 (297)
T 2ojh_A 125 MTKNLP---SYWHGWSPDGKSFTYCGIRDQV---FDIYSMDIDSGVETRLTHGEGR---NDGPDYSPDGRWIYFNSSRTG 195 (297)
T ss_dssp CCSSSS---EEEEEECTTSSEEEEEEEETTE---EEEEEEETTTCCEEECCCSSSC---EEEEEECTTSSEEEEEECTTS
T ss_pred eecCCC---ccceEECCCCCEEEEEECCCCc---eEEEEEECCCCcceEcccCCCc---cccceECCCCCEEEEEecCCC
Confidence 543221 2222222 34 45555554322 3677778887777665433221 122233 555444443 332
Q ss_pred CCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecccCCCc-----cccEEEEEcCC-CcEEEc
Q 007704 510 SAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV--KEAIYVIGGVKNGSE-----IVDTVERFKEG-QGWEEI 576 (592)
Q Consensus 510 ~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~--~~~Iyv~GG~~~~~~-----~~~~v~~Yd~~-~~W~~v 576 (592)
...+|.++........+.... .....+.+ +++.+++++..+... ....+++||.. .....+
T Consensus 196 ---~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~ 264 (297)
T 2ojh_A 196 ---QMQIWRVRVDGSSVERITDSA---YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETL 264 (297)
T ss_dssp ---SCEEEEEETTSSCEEECCCCS---EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEE
T ss_pred ---CccEEEECCCCCCcEEEecCC---cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceee
Confidence 457888888777777664322 12222233 555555555443211 23569999987 555433
No 82
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.77 E-value=0.4 Score=48.07 Aligned_cols=194 Identities=15% Similarity=0.205 Sum_probs=98.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCC-----eEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCC
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPAND-----EWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDI 429 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~-----~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t 429 (592)
++.+++.|+.++ .+..||.... .+..+..+......-..+.+ +++.++.|+.+ ..+.+||...
T Consensus 69 ~~~~las~s~D~-----~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D-----~~v~iwd~~~ 138 (330)
T 2hes_X 69 HTSLLAAGSFDS-----TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRD-----KSVWIWETDE 138 (330)
T ss_dssp TSSEEEEEETTS-----CEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETT-----SCEEEEECCT
T ss_pred CCCEEEEEeCCC-----cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCC-----CEEEEEeccC
Confidence 677888888763 4667776432 12222112211111222333 67777888765 3677888742
Q ss_pred --CeEEEcccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--C--CEE
Q 007704 430 --GKWIRTRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--N--GKL 501 (592)
Q Consensus 430 --~~W~~i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~--~~L 501 (592)
..++.+..+..-...-..+.+ ++.+++.|+.+ ..+.+||..+..|..+..+......-..+.+ + +..
T Consensus 139 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D-----~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 213 (330)
T 2hes_X 139 SGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD-----DTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFR 213 (330)
T ss_dssp TCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT-----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCE
T ss_pred CCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC-----CeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeE
Confidence 334443322221111222222 56677788766 3577888877777766544322222222333 2 456
Q ss_pred EEEecCCCCCCCCeEEEEeCCC------CeEEEcCCCCC--CCcceEEEEECCEEEEEecccCCCccccEEEEEcCC-Cc
Q 007704 502 YALGGFDGSAMVPSIEVYDPRL------GSWMSGEPMKL--SRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG-QG 572 (592)
Q Consensus 502 yv~GG~~~~~~~~~v~~yD~~t------~~W~~v~~lp~--~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~ 572 (592)
++.|+.++ .+.+||... ..|.....++. ...-.+++...+.+++.||.++ .|.+||.. ..
T Consensus 214 l~s~s~D~-----~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg------~v~iw~~~~~~ 282 (330)
T 2hes_X 214 LCSGSDDS-----TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADG------VLAVYEEVDGE 282 (330)
T ss_dssp EEEEETTS-----CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTS------CEEEEEEETTE
T ss_pred EEEEeCCC-----eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCC------EEEEEEcCCCc
Confidence 67777654 355555432 34665544432 2222333333455667777543 47888876 66
Q ss_pred EEEc
Q 007704 573 WEEI 576 (592)
Q Consensus 573 W~~v 576 (592)
|..+
T Consensus 283 ~~~~ 286 (330)
T 2hes_X 283 WKVF 286 (330)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 7554
No 83
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.75 E-value=0.2 Score=50.32 Aligned_cols=188 Identities=14% Similarity=0.139 Sum_probs=97.1
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCC--CeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPAN--DEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKW 432 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t--~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W 432 (592)
+++.++.|+.++ .+..||... ..+..+..+......-..+.+ ++.+++.|+.+ ..+.++|..+..|
T Consensus 118 ~g~~las~s~D~-----~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D-----~~i~iW~~~~~~~ 187 (330)
T 2hes_X 118 DGYYLATCSRDK-----SVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD-----DTVRIWKDYDDDW 187 (330)
T ss_dssp TSCEEEEEETTS-----CEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT-----SCEEEEEEETTEE
T ss_pred CCCEEEEEeCCC-----EEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC-----CeEEEEECCCCCe
Confidence 567777787663 577888742 234333222222222233333 67788888765 3577888877777
Q ss_pred EEcccccCcccceEEEEE--C--CEEEEEeccCCCCCCCeeEEEeCCC------CeEEEeccCCC--CCceeEEEEECCE
Q 007704 433 IRTRSMLQKRFALAAAEL--N--GVLYATGGYDGNEYMNSAERFDPRE------HYWTKIANMNR--RRGCHSLAVLNGK 500 (592)
Q Consensus 433 ~~i~~~p~~R~~~~a~~~--~--g~IYV~GG~~~~~~~~~v~~yD~~t------~~W~~i~~~p~--~R~~~s~v~~~~~ 500 (592)
..+..+..-...-..+.+ + +..++.|+.++ .+.+||+.+ ..|.....++. ...-.+++...+.
T Consensus 188 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~-----~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~ 262 (330)
T 2hes_X 188 ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS-----TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG 262 (330)
T ss_dssp EEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS-----CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS
T ss_pred eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC-----eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC
Confidence 665443321111111222 2 34566666553 355555432 34655544432 2222333333455
Q ss_pred EEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCC--CCC-cceEEEEE---CCEEEEEecccCCCccccEEEEEcCC
Q 007704 501 LYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMK--LSR-GYLGAAVV---KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 501 Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp--~~R-~~~s~~v~---~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+++.||.++ .+.+||..+..|+.+.... ... ...+++.. ++.+++.||.++ .|.+||.+
T Consensus 263 ~l~s~~~dg-----~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg------~v~~W~~~ 327 (330)
T 2hes_X 263 LIASVGADG-----VLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDG------IVNFWSLE 327 (330)
T ss_dssp CEEEEETTS-----CEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTS------EEEEEEC-
T ss_pred EEEEEeCCC-----EEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCC------cEEEEEec
Confidence 677777654 4778888888886653221 111 11222221 456777787653 47777763
No 84
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.71 E-value=0.26 Score=50.12 Aligned_cols=182 Identities=9% Similarity=0.000 Sum_probs=99.4
Q ss_pred EEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcce-EEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEEc
Q 007704 359 ELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSL-AGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRT 435 (592)
Q Consensus 359 ~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~-~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i 435 (592)
.+++.|+.+ ..+..||..+.+....-......... +++.. ++.+++.|+.+ ..+.+||..+......
T Consensus 87 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~ 156 (383)
T 3ei3_B 87 TTVAVGSKG-----GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR-----GATTLRDFSGSVIQVF 156 (383)
T ss_dssp TEEEEEEBT-----SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT-----TEEEEEETTSCEEEEE
T ss_pred CEEEEEcCC-----CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC-----CEEEEEECCCCceEEE
Confidence 678888765 35889999887765543322222222 33333 44777777654 4688899987766554
Q ss_pred ccccCc-ccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCE-EEEEecCCCCC
Q 007704 436 RSMLQK-RFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGK-LYALGGFDGSA 511 (592)
Q Consensus 436 ~~~p~~-R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~-Lyv~GG~~~~~ 511 (592)
...... ..-.+++.. ++.+++.|+.+ ..+.+||+....-..+..-. ....+++.. ++. +++.|+.++
T Consensus 157 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~h~--~~v~~~~~~~~~~~~l~s~~~d~-- 227 (383)
T 3ei3_B 157 AKTDSWDYWYCCVDVSVSRQMLATGDST-----GRLLLLGLDGHEIFKEKLHK--AKVTHAEFNPRCDWLMATSSVDA-- 227 (383)
T ss_dssp ECCCCSSCCEEEEEEETTTTEEEEEETT-----SEEEEEETTSCEEEEEECSS--SCEEEEEECSSCTTEEEEEETTS--
T ss_pred eccCCCCCCeEEEEECCCCCEEEEECCC-----CCEEEEECCCCEEEEeccCC--CcEEEEEECCCCCCEEEEEeCCC--
Confidence 332211 111222222 56677777755 47889998655444433211 112222222 444 788887653
Q ss_pred CCCeEEEEeCCC----CeEEEcCCCCCCCcceEEEEE--CCEEEEEecccCCCccccEEEEEcCC
Q 007704 512 MVPSIEVYDPRL----GSWMSGEPMKLSRGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 512 ~~~~v~~yD~~t----~~W~~v~~lp~~R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.+.+||..+ ......- .......+++.. ++..++.|+.+ ..+.+||..
T Consensus 228 ---~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~~~~~d------~~i~iwd~~ 281 (383)
T 3ei3_B 228 ---TVKLWDLRNIKDKNSYIAEM--PHEKPVNAAYFNPTDSTKLLTTDQR------NEIRVYSSY 281 (383)
T ss_dssp ---EEEEEEGGGCCSTTCEEEEE--ECSSCEEEEEECTTTSCEEEEEESS------SEEEEEETT
T ss_pred ---EEEEEeCCCCCcccceEEEe--cCCCceEEEEEcCCCCCEEEEEcCC------CcEEEEECC
Confidence 688898876 3332221 122222233332 45677777754 458888864
No 85
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=95.66 E-value=0.59 Score=50.12 Aligned_cols=172 Identities=15% Similarity=0.182 Sum_probs=101.3
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEEC--CCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeEE-
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSR--PSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWI- 433 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l--~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~- 433 (592)
++++|+|-| +..|.||..+++.... +.+| . --++...++++|+|-| +..|.||+.+++=.
T Consensus 158 ~~~~yfFkG-------~~yw~yd~~~~~~~~~~w~gi~--~-iDAA~~~~g~~YfFkG-------~~y~rfd~~~~~v~~ 220 (460)
T 1qhu_A 158 DEGILFFQG-------NRKWFWDLTTGTKKERSWPAVG--N-CTSALRWLGRYYCFQG-------NQFLRFNPVSGEVPP 220 (460)
T ss_dssp SSEEEEEET-------TEEEEEETTTTEEEEECCTTSC--C-CSEEEEETTEEEEEET-------TEEEEECTTTCCCCT
T ss_pred CCeEEEEec-------ccEEEEecccceeecccCCCCC--c-cchheeeCCceEEEEC-------CEEEEEcCccCcccC
Confidence 688999998 6799999998876542 2232 2 2355556899999988 67888888665321
Q ss_pred -----------Eccccc------------------CcccceEEEE--ECCEEEEEeccCCCCCCCeeEEEeCCCCeEE--
Q 007704 434 -----------RTRSML------------------QKRFALAAAE--LNGVLYATGGYDGNEYMNSAERFDPREHYWT-- 480 (592)
Q Consensus 434 -----------~i~~~p------------------~~R~~~~a~~--~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~-- 480 (592)
-++... .+....-++. .+|++|+|-| +..|++|.....+.
T Consensus 221 gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg-------~~yWR~~~~~~~~~p~ 293 (460)
T 1qhu_A 221 GYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG-------SHYWRLDTNRDGWHSW 293 (460)
T ss_dssp TCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET-------TEEEECTTGGGCCCCE
T ss_pred CCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC-------CEEEEEecCCCCcCcc
Confidence 111100 0111122333 3689999987 44667765443221
Q ss_pred Ee----ccCCCCCceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcC----------CCCCC--CcceEEEEE
Q 007704 481 KI----ANMNRRRGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGE----------PMKLS--RGYLGAAVV 544 (592)
Q Consensus 481 ~i----~~~p~~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~----------~lp~~--R~~~s~~v~ 544 (592)
.| +.+|.. --++...++++|+|=| +.+|+|+...+ .+.+. .+|.. ...--++..
T Consensus 294 ~Is~~WpglP~~--IDAAf~~~~~~yfFkG-------~~yw~f~~~~g-~~~~~GyPK~I~~~lGlp~~~~~~~IDAA~~ 363 (460)
T 1qhu_A 294 PIAHQWPQGPST--VDAAFSWEDKLYLIQD-------TKVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFV 363 (460)
T ss_dssp EGGGTCTTSCSS--CSEEEEETTEEEEEET-------TEEEEEECSBS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEEC
T ss_pred chhhhccCCCCC--CcEEEEECCeEEEEeC-------CEEEEEeCCCC-ceecCCCCeEHHHhccCCCccccCcccEEEE
Confidence 12 233433 3345556899999966 46888986531 22222 12222 112233332
Q ss_pred ---CCEEEEEecccCCCccccEEEEEcCC
Q 007704 545 ---KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 545 ---~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
++++|+|-| +..|.||..
T Consensus 364 ~~~~~ktyfFkG--------~~ywryd~~ 384 (460)
T 1qhu_A 364 CPGSSRLHIMAG--------RRLWWLDLK 384 (460)
T ss_dssp CTTCCEEEEEET--------TEEEEEEGG
T ss_pred eCCCCEEEEEEC--------CEEEEEECC
Confidence 588999988 568999965
No 86
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.64 E-value=0.61 Score=47.72 Aligned_cols=185 Identities=15% Similarity=0.062 Sum_probs=96.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcce-EEEEE-CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSL-AGATI-DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~-~~~~~-~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
++.+++.|+.+ ..+..||..+.+-.. .+....... +++.. +++.++.|+.+ ..+.+||+.+++-..
T Consensus 150 ~~~~l~s~s~d-----~~i~iwd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~ 217 (420)
T 3vl1_A 150 SGEALISSSQD-----MQLKIWSVKDGSNPR--TLIGHRATVTDIAIIDRGRNVLSASLD-----GTIRLWECGTGTTIH 217 (420)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTCCCCE--EEECCSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCcCce--EEcCCCCcEEEEEEcCCCCEEEEEcCC-----CcEEEeECCCCceeE
Confidence 56777788766 368889987653211 111111112 22222 67777777755 367889988775433
Q ss_pred ccccc-Ccc-cceEEEE----------------------ECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCc
Q 007704 435 TRSML-QKR-FALAAAE----------------------LNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRG 490 (592)
Q Consensus 435 i~~~p-~~R-~~~~a~~----------------------~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~ 490 (592)
.-... ... .-.+.+. -++.+++.|+.+ ..+.+||+.+..-...-.......
T Consensus 218 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~ 292 (420)
T 3vl1_A 218 TFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS-----GVITVHNVFSKEQTIQLPSKFTCS 292 (420)
T ss_dssp EECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETT-----SCEEEEETTTCCEEEEECCTTSSC
T ss_pred EeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCC-----CeEEEEECCCCceeEEcccccCCC
Confidence 21111 011 1111111 156777777755 358899998765332221111222
Q ss_pred eeEEEEE-CCE-EEEEecCCCCCCCCeEEEEeCCCCeE--EEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEEEE
Q 007704 491 CHSLAVL-NGK-LYALGGFDGSAMVPSIEVYDPRLGSW--MSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVER 566 (592)
Q Consensus 491 ~~s~v~~-~~~-Lyv~GG~~~~~~~~~v~~yD~~t~~W--~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~ 566 (592)
..+++.. ++. +++.|+.+ ..+.+||..+..- ..+.. .......++...++.+++.||.+ ..|.+
T Consensus 293 v~~~~~~~~~~~~l~~g~~d-----g~i~vwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~l~s~~~d------~~v~i 360 (420)
T 3vl1_A 293 CNSLTVDGNNANYIYAGYEN-----GMLAQWDLRSPECPVGEFLI-NEGTPINNVYFAAGALFVSSGFD------TSIKL 360 (420)
T ss_dssp EEEEEECSSCTTEEEEEETT-----SEEEEEETTCTTSCSEEEEE-STTSCEEEEEEETTEEEEEETTT------EEEEE
T ss_pred ceeEEEeCCCCCEEEEEeCC-----CeEEEEEcCCCcCchhhhhc-cCCCCceEEEeCCCCEEEEecCC------ccEEE
Confidence 2223332 454 77777765 3688999877531 22211 01122233344578888888764 34777
Q ss_pred EcCC
Q 007704 567 FKEG 570 (592)
Q Consensus 567 Yd~~ 570 (592)
||+.
T Consensus 361 w~~~ 364 (420)
T 3vl1_A 361 DIIS 364 (420)
T ss_dssp EEEC
T ss_pred Eecc
Confidence 7743
No 87
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.62 E-value=0.31 Score=48.04 Aligned_cols=187 Identities=11% Similarity=0.153 Sum_probs=92.7
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE----CCEEEEEecCCCCcccceEEEEeCCCCeE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI----DNKIFAIGGGNGLECFSDVEMLDLDIGKW 432 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~----~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W 432 (592)
+++.++.||.++ .+..||..+.....+..+......-..+.+ ++++++.|+.+ ..+.++|..+++|
T Consensus 20 ~g~~las~s~D~-----~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D-----~~v~iWd~~~~~~ 89 (297)
T 2pm7_B 20 YGKRMATCSSDK-----TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVMIWKEENGRW 89 (297)
T ss_dssp TSSEEEEEETTS-----CEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-----TEEEEEEBSSSCB
T ss_pred CCCEEEEEeCCC-----EEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC-----CEEEEEEcCCCce
Confidence 677888888763 577788765433222222222222223333 26788888765 4688899988877
Q ss_pred EEcccccCcccceEEEEE--C--CEEEEEeccCCCCCCCeeEEEeCCCCe-EEEeccCCCCCceeEEEEE----------
Q 007704 433 IRTRSMLQKRFALAAAEL--N--GVLYATGGYDGNEYMNSAERFDPREHY-WTKIANMNRRRGCHSLAVL---------- 497 (592)
Q Consensus 433 ~~i~~~p~~R~~~~a~~~--~--g~IYV~GG~~~~~~~~~v~~yD~~t~~-W~~i~~~p~~R~~~s~v~~---------- 497 (592)
..+..+.........+.+ + +.+++.|+.+ ..+.+||+.+.. +........... ...+.+
T Consensus 90 ~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d-----~~v~~wd~~~~~~~~~~~~~~h~~~-v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 90 SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD-----GKVSVVEFKENGTTSPIIIDAHAIG-VNSASWAPATIEEDGE 163 (297)
T ss_dssp CCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEEBCSSSCBCCEEEECCSSC-EEEEEECCCC------
T ss_pred EEEEEeecCCCceeEEEeCcCCCCcEEEEEECC-----CcEEEEEecCCCceeeeeeecccCc-cceEeecCCccccccc
Confidence 554332211112222222 1 5566777755 356777776542 211000000000 111111
Q ss_pred -----CCEEEEEecCCCCCCCCeEEEEeCCC--CeEEEcCCCCCCCcceEEEEE--C---CEEEEEecccCCCccccEEE
Q 007704 498 -----NGKLYALGGFDGSAMVPSIEVYDPRL--GSWMSGEPMKLSRGYLGAAVV--K---EAIYVIGGVKNGSEIVDTVE 565 (592)
Q Consensus 498 -----~~~Lyv~GG~~~~~~~~~v~~yD~~t--~~W~~v~~lp~~R~~~s~~v~--~---~~Iyv~GG~~~~~~~~~~v~ 565 (592)
++++++.|+.++ .+.+||..+ ..|..+..+..-......+.+ + +.+++.|+.++ .|.
T Consensus 164 ~~~~~~~~~l~sgs~D~-----~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~------~v~ 232 (297)
T 2pm7_B 164 HNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDR------TCI 232 (297)
T ss_dssp ------CCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS------CEE
T ss_pred CCCCCCcceEEEEcCCC-----cEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCC------cEE
Confidence 245788888764 355666544 346544333322222222333 2 36777777653 367
Q ss_pred EEcCC
Q 007704 566 RFKEG 570 (592)
Q Consensus 566 ~Yd~~ 570 (592)
+||..
T Consensus 233 iWd~~ 237 (297)
T 2pm7_B 233 IWTQD 237 (297)
T ss_dssp EEEES
T ss_pred EEEeC
Confidence 77654
No 88
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=95.61 E-value=0.32 Score=50.16 Aligned_cols=187 Identities=13% Similarity=0.109 Sum_probs=97.8
Q ss_pred EEECCEEEEEeeCCCCCCcceEEEEECCCCe--EEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCC
Q 007704 354 AMLNGELYIFGGGDGNSWHNTVESYSPANDE--WTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDI 429 (592)
Q Consensus 354 v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~--W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t 429 (592)
+..++.+++.|+.+ ..+..||..+.. -..+. ........+.+ ++++++.|+.+ ..+.+||..+
T Consensus 182 ~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~ 248 (401)
T 4aez_A 182 LSWNRHVLSSGSRS-----GAIHHHDVRIANHQIGTLQ---GHSSEVCGLAWRSDGLQLASGGND-----NVVQIWDARS 248 (401)
T ss_dssp EEEETTEEEEEETT-----SEEEEEETTSSSCEEEEEE---CCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTC
T ss_pred EEECCCEEEEEcCC-----CCEEEEecccCcceeeEEc---CCCCCeeEEEEcCCCCEEEEEeCC-----CeEEEccCCC
Confidence 33466778888866 468888887432 12211 11122222233 67788888755 4688999987
Q ss_pred CeEEEc-ccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCE-EEEE
Q 007704 430 GKWIRT-RSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGK-LYAL 504 (592)
Q Consensus 430 ~~W~~i-~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~-Lyv~ 504 (592)
.+-... ... ...-.+++.. +..+++.||.. .-..+.+||+.++.-...-... ....+++.. ++. |++.
T Consensus 249 ~~~~~~~~~~--~~~v~~~~~~p~~~~ll~~~~gs---~d~~i~i~d~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~ 321 (401)
T 4aez_A 249 SIPKFTKTNH--NAAVKAVAWCPWQSNLLATGGGT---MDKQIHFWNAATGARVNTVDAG--SQVTSLIWSPHSKEIMST 321 (401)
T ss_dssp SSEEEEECCC--SSCCCEEEECTTSTTEEEEECCT---TTCEEEEEETTTCCEEEEEECS--SCEEEEEECSSSSEEEEE
T ss_pred CCccEEecCC--cceEEEEEECCCCCCEEEEecCC---CCCEEEEEECCCCCEEEEEeCC--CcEEEEEECCCCCeEEEE
Confidence 543221 111 1111222222 45677776511 1246889999877643332211 112222222 444 4444
Q ss_pred ecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcce-EEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 505 GGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYL-GAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 505 GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~-s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+|... ..+.+||..+.....+..++...... +++.. ++..++.||.+ ..|.+||..
T Consensus 322 ~g~~d----g~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~d------g~i~iw~~~ 379 (401)
T 4aez_A 322 HGFPD----NNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASD------ENLKFWRVY 379 (401)
T ss_dssp ECTTT----CEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTT------SEEEEEECC
T ss_pred eecCC----CcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCC------CcEEEEECC
Confidence 44322 46888998887776654332222222 22222 56677777754 358888875
No 89
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.59 E-value=0.1 Score=53.16 Aligned_cols=143 Identities=14% Similarity=0.179 Sum_probs=73.9
Q ss_pred CEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcc-eEEEE-ECCEEEEEecCCCCcccceEEEEeCCCCeEEEc
Q 007704 358 GELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGS-LAGAT-IDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRT 435 (592)
Q Consensus 358 ~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~-~~~~~-~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i 435 (592)
+..++.|+.+ ..+..||..+.+-... +...... .+++. -+++.++.|+.+ ..+.+||..+.+....
T Consensus 217 ~~~~~~~~~~-----g~i~~~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~ 284 (425)
T 1r5m_A 217 DDKFVIPGPK-----GAIFVYQITEKTPTGK--LIGHHGPISVLEFNDTNKLLLSASDD-----GTLRIWHGGNGNSQNC 284 (425)
T ss_dssp TTEEEEECGG-----GCEEEEETTCSSCSEE--ECCCSSCEEEEEEETTTTEEEEEETT-----SCEEEECSSSBSCSEE
T ss_pred CCEEEEEcCC-----CeEEEEEcCCCceeee--eccCCCceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCccceE
Confidence 3446666654 4688999887533111 1111111 22222 266777777754 3678888876542211
Q ss_pred ccccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCEEEEEecCCCCCCC
Q 007704 436 RSMLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGKLYALGGFDGSAMV 513 (592)
Q Consensus 436 ~~~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~~~~~~ 513 (592)
-.. ....-.+++.. ++ +++.|+.+ ..+.+||+.+..-...-..... ...+++.. ++.+++.|+.++
T Consensus 285 ~~~-~~~~i~~~~~~~~~-~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~~~~~dg---- 352 (425)
T 1r5m_A 285 FYG-HSQSIVSASWVGDD-KVISCSMD-----GSVRLWSLKQNTLLALSIVDGV-PIFAGRISQDGQKYAVAFMDG---- 352 (425)
T ss_dssp ECC-CSSCEEEEEEETTT-EEEEEETT-----SEEEEEETTTTEEEEEEECTTC-CEEEEEECTTSSEEEEEETTS----
T ss_pred ecC-CCccEEEEEECCCC-EEEEEeCC-----CcEEEEECCCCcEeEecccCCc-cEEEEEEcCCCCEEEEEECCC----
Confidence 110 11122233333 45 66666654 4688999987764332221111 11222222 677777877553
Q ss_pred CeEEEEeCCCCe
Q 007704 514 PSIEVYDPRLGS 525 (592)
Q Consensus 514 ~~v~~yD~~t~~ 525 (592)
.+.+||..+..
T Consensus 353 -~i~i~~~~~~~ 363 (425)
T 1r5m_A 353 -QVNVYDLKKLN 363 (425)
T ss_dssp -CEEEEECHHHH
T ss_pred -eEEEEECCCCc
Confidence 57788876544
No 90
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.58 E-value=0.66 Score=47.21 Aligned_cols=185 Identities=10% Similarity=0.069 Sum_probs=91.5
Q ss_pred ECCEEEEEeeCCCCCCcceEEEEECCCCeEEECCC--CCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCe
Q 007704 356 LNGELYIFGGGDGNSWHNTVESYSPANDEWTSRPS--LNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGK 431 (592)
Q Consensus 356 ~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~--lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~ 431 (592)
..+..++.|+.++ .+..||..+++-..... +......-.++.+ +++.++.|+.++ .+.++|+.+++
T Consensus 91 s~d~~l~~~s~dg-----~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~-----~i~iwd~~~~~ 160 (344)
T 4gqb_B 91 VGERGILVASDSG-----AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI-----CIKVWDLAQQV 160 (344)
T ss_dssp ETTTEEEEEETTS-----EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTE
T ss_pred eCCCeEEEEECCC-----EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC-----eEEEEECCCCc
Confidence 3444556777653 57888887764211100 1011111122222 678888887653 68889998875
Q ss_pred EEEcccccCcccc-eEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE---CCEEEEEe
Q 007704 432 WIRTRSMLQKRFA-LAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL---NGKLYALG 505 (592)
Q Consensus 432 W~~i~~~p~~R~~-~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~---~~~Lyv~G 505 (592)
-.. .+..-... .+++.. +..+++.|+.+ ..+.+||+.+..-...-...........+.+ ++.+++.|
T Consensus 161 ~~~--~~~~h~~~V~~~~~~~~~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg 233 (344)
T 4gqb_B 161 VLS--SYRAHAAQVTCVAASPHKDSVFLSCSED-----NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFG 233 (344)
T ss_dssp EEE--EECCCSSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEE
T ss_pred EEE--EEcCcCCceEEEEecCCCCCceeeeccc-----cccccccccccceeeeeecceeeccceeeeecCCCCcceEEe
Confidence 432 22111111 112221 33577778766 3578899887654332111111111222333 56788888
Q ss_pred cCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE--CC-EEEEEecccCCCccccEEEEEcCC
Q 007704 506 GFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV--KE-AIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 506 G~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~--~~-~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+.++ .|.+||..+.+- +..+.........+.+ ++ .+++.|+.++ .|.+||..
T Consensus 234 ~~dg-----~v~~wd~~~~~~--~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~------~i~vwd~~ 288 (344)
T 4gqb_B 234 DENG-----TVSLVDTKSTSC--VLSSAVHSQCVTGLVFSPHSVPFLASLSEDC------SLAVLDSS 288 (344)
T ss_dssp ETTS-----EEEEEESCC--C--CEEEECCSSCEEEEEECSSSSCCEEEEETTS------CEEEECTT
T ss_pred ccCC-----cEEEEECCCCcE--EEEEcCCCCCEEEEEEccCCCeEEEEEeCCC------eEEEEECC
Confidence 8653 588899876531 1111111122222333 33 5666666543 37777765
No 91
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.53 E-value=0.42 Score=48.51 Aligned_cols=184 Identities=9% Similarity=0.024 Sum_probs=93.0
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCC--------------cceEEEEECCEEEEEecCCCCcccceE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTK--------------GSLAGATIDNKIFAIGGGNGLECFSDV 422 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r--------------~~~~~~~~~~~Iyv~GG~~~~~~~~~v 422 (592)
++..++.|+.+ ..+..||..+.+....-..+... ...+++...+..+++|+.+ ..+
T Consensus 160 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~i 229 (425)
T 1r5m_A 160 DGTHIISMDVE-----NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK-----GAI 229 (425)
T ss_dssp TSSEEEEEETT-----CCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGG-----GCE
T ss_pred CCCEEEEEecC-----CeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC-----CeE
Confidence 56677777755 35788998887654332211111 0222333333446666533 478
Q ss_pred EEEeCCCCeEEEcccccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCE
Q 007704 423 EMLDLDIGKWIRTRSMLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGK 500 (592)
Q Consensus 423 ~~yD~~t~~W~~i~~~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~ 500 (592)
.+||..+.+-...-.. ....-.+++.. ++.+++.|+.+ ..+.+||+.+......-. .......+++.. ++
T Consensus 230 ~~~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~- 301 (425)
T 1r5m_A 230 FVYQITEKTPTGKLIG-HHGPISVLEFNDTNKLLLSASDD-----GTLRIWHGGNGNSQNCFY-GHSQSIVSASWVGDD- 301 (425)
T ss_dssp EEEETTCSSCSEEECC-CSSCEEEEEEETTTTEEEEEETT-----SCEEEECSSSBSCSEEEC-CCSSCEEEEEEETTT-
T ss_pred EEEEcCCCceeeeecc-CCCceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCccceEec-CCCccEEEEEECCCC-
Confidence 8999887642211110 11111222232 55666777654 357888887654221111 112222334444 55
Q ss_pred EEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 501 LYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 501 Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+++.|+.+ ..+.+||..+..-...-... .....+++.. ++.+++.|+.++ .|.+||..
T Consensus 302 ~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~~dg------~i~i~~~~ 360 (425)
T 1r5m_A 302 KVISCSMD-----GSVRLWSLKQNTLLALSIVD-GVPIFAGRISQDGQKYAVAFMDG------QVNVYDLK 360 (425)
T ss_dssp EEEEEETT-----SEEEEEETTTTEEEEEEECT-TCCEEEEEECTTSSEEEEEETTS------CEEEEECH
T ss_pred EEEEEeCC-----CcEEEEECCCCcEeEecccC-CccEEEEEEcCCCCEEEEEECCC------eEEEEECC
Confidence 67777754 36889998876543321111 1111222222 466777777543 47888865
No 92
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.51 E-value=0.29 Score=55.28 Aligned_cols=182 Identities=13% Similarity=0.162 Sum_probs=96.7
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCC-eEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIG-KWI 433 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~-~W~ 433 (592)
++..+++||.+ ..+.+||..+++....- .........+.+ +++.++.|+.+ ..+.+||..++ ...
T Consensus 66 ~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~~~ 133 (814)
T 3mkq_A 66 RKNWIIVGSDD-----FRIRVFNYNTGEKVVDF--EAHPDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNWALE 133 (814)
T ss_dssp GGTEEEEEETT-----SEEEEEETTTCCEEEEE--ECCSSCEEEEEECSSSSEEEEEETT-----SEEEEEEGGGTSEEE
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEE--ecCCCCEEEEEEeCCCCEEEEEcCC-----CEEEEEECCCCceEE
Confidence 66777888765 46889999887764321 111111222222 56666777644 46888998776 322
Q ss_pred EcccccC-cccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE---CCEEEEEecC
Q 007704 434 RTRSMLQ-KRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL---NGKLYALGGF 507 (592)
Q Consensus 434 ~i~~~p~-~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~---~~~Lyv~GG~ 507 (592)
.. +.. ...-.+++.. ++.+++.|+.+ ..+.+||+.+..-...-.........++... ++.+++.|+.
T Consensus 134 ~~--~~~~~~~v~~~~~~p~~~~~l~~~~~d-----g~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~ 206 (814)
T 3mkq_A 134 QT--FEGHEHFVMCVAFNPKDPSTFASGCLD-----RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASD 206 (814)
T ss_dssp EE--EECCSSCEEEEEEETTEEEEEEEEETT-----SEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECT
T ss_pred EE--EcCCCCcEEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeC
Confidence 21 111 1112223333 45677777765 4688899866542211111111112222222 6677788775
Q ss_pred CCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecccCCCccccEEEEEcCC
Q 007704 508 DGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 508 ~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
++ .+.+||..+..-... +.........+.+ ++.+++.|+.++ .|.+||..
T Consensus 207 dg-----~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg------~v~vwd~~ 258 (814)
T 3mkq_A 207 DL-----TIKIWDYQTKSCVAT--LEGHMSNVSFAVFHPTLPIIISGSEDG------TLKIWNSS 258 (814)
T ss_dssp TS-----EEEEEETTTTEEEEE--EECCSSCEEEEEECSSSSEEEEEETTS------CEEEEETT
T ss_pred CC-----EEEEEECCCCcEEEE--EcCCCCCEEEEEEcCCCCEEEEEeCCC------eEEEEECC
Confidence 53 688999887653321 1111122222223 456777777654 37888875
No 93
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.48 E-value=1.1 Score=46.75 Aligned_cols=198 Identities=9% Similarity=-0.005 Sum_probs=102.0
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEE--CCCCCCCCcce-EEE-EEC---CEEEEEecCCCCcccceEEEEeCCC
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTS--RPSLNGTKGSL-AGA-TID---NKIFAIGGGNGLECFSDVEMLDLDI 429 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~--l~~lp~~r~~~-~~~-~~~---~~Iyv~GG~~~~~~~~~v~~yD~~t 429 (592)
+++.++.|+.+ ..++.++..+..... ...+....... +++ .-+ +++++.|+.+ ..+.+||+.+
T Consensus 160 ~~~~l~~~~~~-----g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-----~~i~vwd~~~ 229 (450)
T 2vdu_B 160 DDTTVIIADKF-----GDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-----EHIKISHYPQ 229 (450)
T ss_dssp TSSEEEEEETT-----SEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-----SCEEEEEESC
T ss_pred CCCEEEEEeCC-----CcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC-----CcEEEEECCC
Confidence 56777777754 457888877654321 11121111112 222 236 7788888765 4688888877
Q ss_pred CeEEEc-ccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccC-----------------------
Q 007704 430 GKWIRT-RSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANM----------------------- 485 (592)
Q Consensus 430 ~~W~~i-~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~----------------------- 485 (592)
.+.... ..-........+.. ++.+++.|+.+ ..+.+||+.++.....-..
T Consensus 230 ~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d-----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (450)
T 2vdu_B 230 CFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD-----DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENN 303 (450)
T ss_dssp TTCEEEECCCCSSCEEEEEEC-STTEEEEEESS-----SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC---------
T ss_pred CceeeeeecCCCCceEEEEEC-CCCEEEEEeCC-----CeEEEEECCCCcEeeeecchhhhhhhhhhccccccccccccc
Confidence 654322 10011111122222 77777788755 4788999988764332110
Q ss_pred -CCCCceeEEEEE-CCEEEEEecCCCCCCCCeEEEEeC--C-CCeEEEcCCCCCCCcceEEEEECCEEEEEecccCCC--
Q 007704 486 -NRRRGCHSLAVL-NGKLYALGGFDGSAMVPSIEVYDP--R-LGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGS-- 558 (592)
Q Consensus 486 -p~~R~~~s~v~~-~~~Lyv~GG~~~~~~~~~v~~yD~--~-t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~-- 558 (592)
........++.. ++..+++++.. -..+.+||. . ...+..+..++......+++...+.+++..+.....
T Consensus 304 ~~~~~~v~~i~~~~~~~~l~~~~~~----d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~ 379 (450)
T 2vdu_B 304 DIIEFAVSKIIKSKNLPFVAFFVEA----TKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDNKESSGV 379 (450)
T ss_dssp -CBCCCEEEEEECSSSSEEEEEETT----CSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECCTTCCSS
T ss_pred ccceEEEEEEEEeCCCCEEEEEECC----CCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEecccCCCC
Confidence 011112222222 44444444421 246788887 3 345665554443333445556667777776643311
Q ss_pred -ccccEEEEEcCC-CcEE
Q 007704 559 -EIVDTVERFKEG-QGWE 574 (592)
Q Consensus 559 -~~~~~v~~Yd~~-~~W~ 574 (592)
...-.++.++.+ ..|.
T Consensus 380 ~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 380 QKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp CCCSEEEEEEETTTTEEE
T ss_pred CCcceEEEEEEcCCCeEE
Confidence 122356666776 6775
No 94
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.48 E-value=0.45 Score=48.46 Aligned_cols=182 Identities=12% Similarity=0.099 Sum_probs=94.9
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE---CCEEEEEecCCCCcccceEEEEeCCCCeEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI---DNKIFAIGGGNGLECFSDVEMLDLDIGKWI 433 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~---~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~ 433 (592)
+++.++.|+.++ .+..+|..+++-... +......-.++.+ +..+++.|+.+ ..+.+||..+.+-.
T Consensus 138 dg~~l~sgs~d~-----~i~iwd~~~~~~~~~--~~~h~~~V~~~~~~~~~~~~l~s~s~D-----~~v~iwd~~~~~~~ 205 (344)
T 4gqb_B 138 SGTQAVSGSKDI-----CIKVWDLAQQVVLSS--YRAHAAQVTCVAASPHKDSVFLSCSED-----NRILLWDTRCPKPA 205 (344)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTTEEEEE--ECCCSSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTSSSCE
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCcEEEE--EcCcCCceEEEEecCCCCCceeeeccc-----ccccccccccccee
Confidence 677888888763 588899988765332 2211122222222 33578888765 36788999877543
Q ss_pred EcccccCcccceEEEEE---CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CC-EEEEEecC
Q 007704 434 RTRSMLQKRFALAAAEL---NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NG-KLYALGGF 507 (592)
Q Consensus 434 ~i~~~p~~R~~~~a~~~---~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~-~Lyv~GG~ 507 (592)
..-..........++.+ ++.+++.|+.+ ..+.+||+.+..- +..+......-..+.+ ++ .+++.|+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d-----g~v~~wd~~~~~~--~~~~~~h~~~v~~v~fsp~g~~~lasgs~ 278 (344)
T 4gqb_B 206 SQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN-----GTVSLVDTKSTSC--VLSSAVHSQCVTGLVFSPHSVPFLASLSE 278 (344)
T ss_dssp EECC----CCCEEEEEECSSCTTEEEEEETT-----SEEEEEESCC--C--CEEEECCSSCEEEEEECSSSSCCEEEEET
T ss_pred eeeecceeeccceeeeecCCCCcceEEeccC-----CcEEEEECCCCcE--EEEEcCCCCCEEEEEEccCCCeEEEEEeC
Confidence 32111111111222222 56688888765 3678899876531 1111111111223333 33 57777876
Q ss_pred CCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-C-CEEEEEecccCCCccccEEEEEcCC
Q 007704 508 DGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-K-EAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 508 ~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~-~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
++ .+.+||..+..-..+.. +...-.+++.. + ..+++.||.++. |.+|+..
T Consensus 279 D~-----~i~vwd~~~~~~~~~~~--H~~~V~~v~~sp~~~~llas~s~D~~------v~~w~v~ 330 (344)
T 4gqb_B 279 DC-----SLAVLDSSLSELFRSQA--HRDFVRDATWSPLNHSLLTTVGWDHQ------VVHHVVP 330 (344)
T ss_dssp TS-----CEEEECTTCCEEEEECC--CSSCEEEEEECSSSTTEEEEEETTSC------EEEEECC
T ss_pred CC-----eEEEEECCCCcEEEEcC--CCCCEEEEEEeCCCCeEEEEEcCCCe------EEEEECC
Confidence 54 47889988876444321 22222233322 3 457777886543 6666653
No 95
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.41 E-value=0.65 Score=48.50 Aligned_cols=200 Identities=11% Similarity=-0.020 Sum_probs=105.8
Q ss_pred CEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEE--ECCEEEEEecCCCCcccceEEEEeCCCCeEEEc
Q 007704 358 GELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGAT--IDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRT 435 (592)
Q Consensus 358 ~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~--~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i 435 (592)
++|...+...+......++.+|........+..-. ....... -+++.+++++.+.. ...++++|+.+++...+
T Consensus 144 ~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~---~~v~~~~~Spdg~~la~~s~~~~--~~~i~~~d~~tg~~~~l 218 (415)
T 2hqs_A 144 TRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSP---QPLMSPAWSPDGSKLAYVTFESG--RSALVIQTLANGAVRQV 218 (415)
T ss_dssp CEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEES---SCEEEEEECTTSSEEEEEECTTS--SCEEEEEETTTCCEEEE
T ss_pred CEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCC---CcceeeEEcCCCCEEEEEEecCC--CcEEEEEECCCCcEEEe
Confidence 44444443322222367888998765444332111 1112222 26776677665432 25899999999887665
Q ss_pred ccccCcccceEEEEE-CCE-EEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCEEEEEecCCCCC
Q 007704 436 RSMLQKRFALAAAEL-NGV-LYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGKLYALGGFDGSA 511 (592)
Q Consensus 436 ~~~p~~R~~~~a~~~-~g~-IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~Lyv~GG~~~~~ 511 (592)
...+. ...+.+.. +++ |++.+..++ ...++++|+.++....+..... ....+.+ +++.+++++...
T Consensus 219 ~~~~~--~~~~~~~spdg~~la~~~~~~g---~~~i~~~d~~~~~~~~l~~~~~---~~~~~~~spdg~~l~~~s~~~-- 288 (415)
T 2hqs_A 219 ASFPR--HNGAPAFSPDGSKLAFALSKTG---SLNLYVMDLASGQIRQVTDGRS---NNTEPTWFPDSQNLAFTSDQA-- 288 (415)
T ss_dssp ECCSS--CEEEEEECTTSSEEEEEECTTS---SCEEEEEETTTCCEEECCCCSS---CEEEEEECTTSSEEEEEECTT--
T ss_pred ecCCC--cccCEEEcCCCCEEEEEEecCC---CceEEEEECCCCCEEeCcCCCC---cccceEECCCCCEEEEEECCC--
Confidence 43322 11222222 444 554554332 2579999999988766643321 2223334 565555544321
Q ss_pred CCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC-CcEEEcc
Q 007704 512 MVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG-QGWEEIN 577 (592)
Q Consensus 512 ~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~W~~v~ 577 (592)
....++.+|..+..-+.+... .....+++.. +++.+++++..+. ...++++|+. .....+.
T Consensus 289 g~~~i~~~d~~~~~~~~l~~~--~~~~~~~~~spdG~~l~~~~~~~g---~~~i~~~d~~~~~~~~l~ 351 (415)
T 2hqs_A 289 GRPQVYKVNINGGAPQRITWE--GSQNQDADVSSDGKFMVMVSSNGG---QQHIAKQDLATGGVQVLS 351 (415)
T ss_dssp SSCEEEEEETTSSCCEECCCS--SSEEEEEEECTTSSEEEEEEECSS---CEEEEEEETTTCCEEECC
T ss_pred CCcEEEEEECCCCCEEEEecC--CCcccCeEECCCCCEEEEEECcCC---ceEEEEEECCCCCEEEec
Confidence 134799999988765554321 1222222222 5555555554321 2579999987 6665553
No 96
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.32 E-value=1.6 Score=48.03 Aligned_cols=121 Identities=12% Similarity=0.131 Sum_probs=72.7
Q ss_pred eEEEEECCEEEEEeeCCCCCCcceEEEEEC-CCC--eEEECCCCCCC--------CcceEEEEECCEEEEEecCCCCccc
Q 007704 351 ASAAMLNGELYIFGGGDGNSWHNTVESYSP-AND--EWTSRPSLNGT--------KGSLAGATIDNKIFAIGGGNGLECF 419 (592)
Q Consensus 351 ~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~-~t~--~W~~l~~lp~~--------r~~~~~~~~~~~Iyv~GG~~~~~~~ 419 (592)
.+.++.++.||+.... ...++++|. .++ .|+.-...+.. ....+.+..+++||+... .
T Consensus 56 ~~P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------d 124 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAF-----PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------N 124 (571)
T ss_dssp SCCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------T
T ss_pred cccEEECCEEEEEeCC-----CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------C
Confidence 4456679999998652 246999999 766 58764332211 111234567889988743 2
Q ss_pred ceEEEEeCCCC--eEEEc-ccccCc-ccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCe--EEEe
Q 007704 420 SDVEMLDLDIG--KWIRT-RSMLQK-RFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHY--WTKI 482 (592)
Q Consensus 420 ~~v~~yD~~t~--~W~~i-~~~p~~-R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~--W~~i 482 (592)
..++.+|..|+ .|+.- ...+.. ....+-++.++.+|+..+......-..++.||+++++ |+.-
T Consensus 125 g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 125 GHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 47899999887 48643 221111 1122334568998876542111123578999998765 8754
No 97
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.31 E-value=0.27 Score=55.55 Aligned_cols=184 Identities=9% Similarity=0.056 Sum_probs=95.7
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeEEEcc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTR 436 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~ 436 (592)
++..+++|+.+ ..+..||..+++....-.............-+++.+++|+.+ ..+.+||..+++....-
T Consensus 24 ~~~~la~~~~~-----g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~ 93 (814)
T 3mkq_A 24 TEPWVLTTLYS-----GRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVVDF 93 (814)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEEE
Confidence 56777777754 468899988876543211111111111122267777887754 47889999888764321
Q ss_pred cccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCC-eEEEeccCCCCCceeEEEEE--CCEEEEEecCCCCCC
Q 007704 437 SMLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREH-YWTKIANMNRRRGCHSLAVL--NGKLYALGGFDGSAM 512 (592)
Q Consensus 437 ~~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~-~W~~i~~~p~~R~~~s~v~~--~~~Lyv~GG~~~~~~ 512 (592)
.... ..-.+++.. ++..++.|+.+ ..+.+||+.++ .....-. .......+++.. ++.+++.|+.++
T Consensus 94 ~~~~-~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~dg--- 163 (814)
T 3mkq_A 94 EAHP-DYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNWALEQTFE-GHEHFVMCVAFNPKDPSTFASGCLDR--- 163 (814)
T ss_dssp ECCS-SCEEEEEECSSSSEEEEEETT-----SEEEEEEGGGTSEEEEEEE-CCSSCEEEEEEETTEEEEEEEEETTS---
T ss_pred ecCC-CCEEEEEEeCCCCEEEEEcCC-----CEEEEEECCCCceEEEEEc-CCCCcEEEEEEEcCCCCEEEEEeCCC---
Confidence 1111 111122222 55556666654 46788888775 3322211 111112233333 466788887653
Q ss_pred CCeEEEEeCCCCe--EEEcCCCCCCCcceEEEEE---CCEEEEEecccCCCccccEEEEEcCC
Q 007704 513 VPSIEVYDPRLGS--WMSGEPMKLSRGYLGAAVV---KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 513 ~~~v~~yD~~t~~--W~~v~~lp~~R~~~s~~v~---~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.+.+||..+.. +..... .......++.. ++..+++|+.+ ..|.+||..
T Consensus 164 --~v~vwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~d------g~i~~~d~~ 216 (814)
T 3mkq_A 164 --TVKVWSLGQSTPNFTLTTG--QERGVNYVDYYPLPDKPYMITASDD------LTIKIWDYQ 216 (814)
T ss_dssp --EEEEEETTCSSCSEEEECC--CTTCCCEEEECCSTTCCEEEEECTT------SEEEEEETT
T ss_pred --eEEEEECCCCcceeEEecC--CCCCEEEEEEEECCCCCEEEEEeCC------CEEEEEECC
Confidence 68889886543 222211 11222222222 56677777754 347777764
No 98
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.29 E-value=0.29 Score=49.52 Aligned_cols=196 Identities=10% Similarity=-0.086 Sum_probs=97.2
Q ss_pred ceEEEEECCCCeEEECCCCCCCCcceEEEEE-CCE-EEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEE
Q 007704 373 NTVESYSPANDEWTSRPSLNGTKGSLAGATI-DNK-IFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAEL 450 (592)
Q Consensus 373 ~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~-Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~ 450 (592)
..++.+|+.+++...+...+. ...+....- +++ |++............++++|+.+.+++.+.. ..+........+
T Consensus 168 ~~l~~~d~~~g~~~~~~~~~~-~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~ 245 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQDTA-WLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHEFW 245 (396)
T ss_dssp EEEEEEETTTCCEEEEEEESS-CEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEEEE
T ss_pred ceEEEEECCCCcEEeeccCCc-ccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCCCccccceEE
Confidence 578889998887766542111 111222222 344 4444321111122579999998888777654 211111222222
Q ss_pred --CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCEEEEEecCCC-----------CCCCCeE
Q 007704 451 --NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGKLYALGGFDG-----------SAMVPSI 516 (592)
Q Consensus 451 --~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~~-----------~~~~~~v 516 (592)
+++.+++.+.........++++|+.++....+...+. .. ....- +++++++++.+. ......+
T Consensus 246 spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i 322 (396)
T 3c5m_A 246 IPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFL 322 (396)
T ss_dssp CTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEECCC----------CCCCCCEE
T ss_pred CCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcE
Confidence 4543333333222222349999999988777654442 11 22223 677777655321 0123679
Q ss_pred EEEeCCCCeEEEcCCCCCCC---------cceEEEE-ECCEEEEEecccCCCccccEEEEEcCC-CcEEEc
Q 007704 517 EVYDPRLGSWMSGEPMKLSR---------GYLGAAV-VKEAIYVIGGVKNGSEIVDTVERFKEG-QGWEEI 576 (592)
Q Consensus 517 ~~yD~~t~~W~~v~~lp~~R---------~~~s~~v-~~~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~W~~v 576 (592)
+.+|+.+...+.+...+..- .....+. -+++.+++.+.... ...+|.+|.. ..++++
T Consensus 323 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~---~~~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 323 YVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEG---VPAIYIADVPESYKHLE 390 (396)
T ss_dssp EEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTS---SCEEEEEECCTTCC---
T ss_pred EEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCC---CceEEEEEEcccccccc
Confidence 99999887765553222100 0111122 24544444443221 2468888877 666554
No 99
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=95.27 E-value=0.98 Score=43.01 Aligned_cols=145 Identities=20% Similarity=0.190 Sum_probs=84.9
Q ss_pred eEEEEECCEEEEEeeCCCCCCcceEEEEECCCCeEE--EC----CCCCCCCcceEEEEE--CCEEEEEecCCCCcccceE
Q 007704 351 ASAAMLNGELYIFGGGDGNSWHNTVESYSPANDEWT--SR----PSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDV 422 (592)
Q Consensus 351 ~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~--~l----~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v 422 (592)
-+++..++++|+|=| ..+|+++.....+. .+ +.+|. ... ++... +++||+|-| +.+
T Consensus 27 DAi~~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~wp~Lp~-~iD-Aa~~~~~~~~iyfFkG-------~~~ 90 (207)
T 1pex_A 27 DAITSLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSFWPELPN-RID-AAYEHPSHDLIFIFRG-------RKF 90 (207)
T ss_dssp SEEEEETTEEEEEET-------TEEEEECSSSSCCEEEEHHHHCTTSCS-SCC-EEEEETTTTEEEEEET-------TEE
T ss_pred eEEEeCCCcEEEEEC-------CEEEEEeCCCcCCCceehhHhccCCCC-Ccc-EEEEeccCCcEEEEcc-------CEE
Confidence 355567999999988 55788876554332 11 33442 222 23333 689999987 567
Q ss_pred EEEeCCCCeE---EEcccccCcc--cceEEEEE---CCEEEEEeccCCCCCCCeeEEEeCCCCeEEE-----e----ccC
Q 007704 423 EMLDLDIGKW---IRTRSMLQKR--FALAAAEL---NGVLYATGGYDGNEYMNSAERFDPREHYWTK-----I----ANM 485 (592)
Q Consensus 423 ~~yD~~t~~W---~~i~~~p~~R--~~~~a~~~---~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~-----i----~~~ 485 (592)
|+|+..+-.- +.+..+..+. ..--+++. ++++|+|-| +..|+||..+++=.. + +.+
T Consensus 91 w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~~~d~gyPr~i~~~~~Gi 163 (207)
T 1pex_A 91 WALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDTNHIMDKDYPRLIEEDFPGI 163 (207)
T ss_dssp EEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETTTTEECSSCCCBHHHHSTTS
T ss_pred EEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEeCcCccccCCCCccHHHcCCCC
Confidence 8886432211 2233222222 12223332 489999988 578999987654221 1 122
Q ss_pred CCCCceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCCeEE
Q 007704 486 NRRRGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLGSWM 527 (592)
Q Consensus 486 p~~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~ 527 (592)
|. ...++...++++|+|-| +..|+||..+.+-.
T Consensus 164 p~--~iDaAf~~~g~~YfFkg-------~~y~rf~~~~~~v~ 196 (207)
T 1pex_A 164 GD--KVDAVYEKNGYIYFFNG-------PIQFEYSIWSNRIV 196 (207)
T ss_dssp CS--CCSEEEEETTEEEEEET-------TEEEEEETTTTEEE
T ss_pred CC--CccEEEEcCCcEEEEEC-------CEEEEEeCCccEEe
Confidence 22 23344456999999977 46899998876544
No 100
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=95.26 E-value=0.65 Score=45.82 Aligned_cols=184 Identities=7% Similarity=-0.009 Sum_probs=94.8
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEE-ECCE-EEEEecCCCCcccceEEEEeCCCCeE-E
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGAT-IDNK-IFAIGGGNGLECFSDVEMLDLDIGKW-I 433 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~-Iyv~GG~~~~~~~~~v~~yD~~t~~W-~ 433 (592)
.+.+|+.++.+ +.+..||+.+++....-..+.. ...++. -+++ +|+.+..+ ..++++|+.+++. .
T Consensus 9 ~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~~ 76 (331)
T 3u4y_A 9 SNFGIVVEQHL-----RRISFFSTDTLEILNQITLGYD--FVDTAITSDCSNVVVTSDFC-----QTLVQIETQLEPPKV 76 (331)
T ss_dssp CCEEEEEEGGG-----TEEEEEETTTCCEEEEEECCCC--EEEEEECSSSCEEEEEESTT-----CEEEEEECSSSSCEE
T ss_pred CCEEEEEecCC-----CeEEEEeCcccceeeeEEccCC--cceEEEcCCCCEEEEEeCCC-----CeEEEEECCCCceeE
Confidence 56778877644 5799999999888554333221 122222 2554 77776533 3899999988874 2
Q ss_pred -EcccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CC-EEEEEecCC
Q 007704 434 -RTRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NG-KLYALGGFD 508 (592)
Q Consensus 434 -~i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~-~Lyv~GG~~ 508 (592)
.+.....++ ++++.. +..+| .+... .....+.+||+.++.....-+. ....+.++.. ++ .||+.+..+
T Consensus 77 ~~~~~~~~~~--~~~~~s~dg~~l~-~~~~~--~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~ 149 (331)
T 3u4y_A 77 VAIQEGQSSM--ADVDITPDDQFAV-TVTGL--NHPFNMQSYSFLKNKFISTIPI--PYDAVGIAISPNGNGLILIDRSS 149 (331)
T ss_dssp EEEEECSSCC--CCEEECTTSSEEE-ECCCS--SSSCEEEEEETTTTEEEEEEEC--CTTEEEEEECTTSSCEEEEEETT
T ss_pred EecccCCCCc--cceEECCCCCEEE-EecCC--CCcccEEEEECCCCCeEEEEEC--CCCccceEECCCCCEEEEEecCC
Confidence 222212222 212222 44566 33221 1113799999998876543222 2222344443 44 477775532
Q ss_pred CCCCCCe-EEEEeCCCCe-EEEc--CCCCCCCcceEEEEE-CC-EEEEEecccCCCccccEEEEEcCC
Q 007704 509 GSAMVPS-IEVYDPRLGS-WMSG--EPMKLSRGYLGAAVV-KE-AIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 509 ~~~~~~~-v~~yD~~t~~-W~~v--~~lp~~R~~~s~~v~-~~-~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.. +.+|+...+. .... ..++.......++.. ++ .+|+.+..+ +.|.+||+.
T Consensus 150 -----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~------~~v~v~d~~ 206 (331)
T 3u4y_A 150 -----ANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIG------NSIGILETQ 206 (331)
T ss_dssp -----TTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTT------TEEEEEECS
T ss_pred -----CceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCC------CeEEEEECC
Confidence 23 6666654321 1111 111222222333333 44 477765432 568899986
No 101
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.24 E-value=0.84 Score=45.01 Aligned_cols=183 Identities=12% Similarity=0.167 Sum_probs=91.8
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
++.+++.|+.+ ..+..||..+++-... +......-..+.+ ++++++.|+.+ ..+.+||..++. ..
T Consensus 66 ~~~~l~s~s~d-----~~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sgs~D-----~~v~lWd~~~~~-~~ 132 (304)
T 2ynn_A 66 RKNWIIVGSDD-----FRIRVFNYNTGEKVVD--FEAHPDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNW-AL 132 (304)
T ss_dssp GGTEEEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEECSSSSEEEEEETT-----SCEEEEEGGGTT-EE
T ss_pred CCCEEEEECCC-----CEEEEEECCCCcEEEE--EeCCCCcEEEEEEcCCCCEEEEECCC-----CeEEEEECCCCc-ch
Confidence 66777778766 4688899887654221 1111111222222 56777788765 367788876542 11
Q ss_pred cccccC-cccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE---CCEEEEEecCC
Q 007704 435 TRSMLQ-KRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL---NGKLYALGGFD 508 (592)
Q Consensus 435 i~~~p~-~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~---~~~Lyv~GG~~ 508 (592)
...+.. ...-.+++.. ++.+++.|+.+ ..+.+||+.+..-...-.....+....+... ++.+++.|+.+
T Consensus 133 ~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D-----~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D 207 (304)
T 2ynn_A 133 EQTFEGHEHFVMCVAFNPKDPSTFASGCLD-----RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD 207 (304)
T ss_dssp EEEECCCCSCEEEEEECTTCTTEEEEEETT-----SEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETT
T ss_pred hhhhcccCCcEEEEEECCCCCCEEEEEeCC-----CeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCC
Confidence 111111 1111222222 45677788766 4677888765431111001111111122221 45677777765
Q ss_pred CCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecccCCCccccEEEEEcCC
Q 007704 509 GSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 509 ~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+ .+.+||..+..-.. .+.........+.+ ++.+++.|+.++ .|.+||..
T Consensus 208 ~-----~i~iWd~~~~~~~~--~~~~h~~~v~~~~~~p~~~~l~s~s~Dg------~i~iWd~~ 258 (304)
T 2ynn_A 208 L-----TIKIWDYQTKSCVA--TLEGHMSNVSFAVFHPTLPIIISGSEDG------TLKIWNSS 258 (304)
T ss_dssp S-----EEEEEETTTTEEEE--EEECCSSCEEEEEECSSSSEEEEEETTS------CEEEEETT
T ss_pred C-----eEEEEeCCCCccce--eeCCCCCCEEEEEECCCCCEEEEEcCCC------eEEEEECC
Confidence 3 68889988765322 11111122222333 456777777654 37777764
No 102
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.23 E-value=1.6 Score=43.49 Aligned_cols=144 Identities=10% Similarity=0.077 Sum_probs=75.8
Q ss_pred ceEEEEECCCCeEEECCCCCCCC-cceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccc-eEEEEE
Q 007704 373 NTVESYSPANDEWTSRPSLNGTK-GSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFA-LAAAEL 450 (592)
Q Consensus 373 ~~v~~yd~~t~~W~~l~~lp~~r-~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~-~~a~~~ 450 (592)
-.+|.+|..++++..+....... ....+..-+++||+.+... ....+++||+.+++++.+......... ..++..
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~---~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~s 94 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKED---DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVD 94 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEET---TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEE
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecC---CCceEEEEEecCCcEEEeeeeecCCCCCEEEEEC
Confidence 34788898888887643221111 1112223378888776421 125789999988888776543221111 222333
Q ss_pred -CC-EEEEEeccCCCCCCCeeEEEeCC-CCeEEEeccC------CCCC----ceeEEEEE-CCEEEEEecCCCCCCCCeE
Q 007704 451 -NG-VLYATGGYDGNEYMNSAERFDPR-EHYWTKIANM------NRRR----GCHSLAVL-NGKLYALGGFDGSAMVPSI 516 (592)
Q Consensus 451 -~g-~IYV~GG~~~~~~~~~v~~yD~~-t~~W~~i~~~------p~~R----~~~s~v~~-~~~Lyv~GG~~~~~~~~~v 516 (592)
++ .+|+.+..+ ..+.+||+. ++....+... |..| ..++++.- ++++|+.+..+ +.+
T Consensus 95 pdg~~l~~~~~~~-----~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~-----~~v 164 (347)
T 3hfq_A 95 EARQLVYSANYHK-----GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS-----DKV 164 (347)
T ss_dssp TTTTEEEEEETTT-----TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT-----TEE
T ss_pred CCCCEEEEEeCCC-----CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC-----CEE
Confidence 44 566665322 457788874 3344433211 1111 12233333 66777765422 468
Q ss_pred EEEeCC-CCeEEEc
Q 007704 517 EVYDPR-LGSWMSG 529 (592)
Q Consensus 517 ~~yD~~-t~~W~~v 529 (592)
.+||.. +.....+
T Consensus 165 ~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 165 YVYNVSDAGQLSEQ 178 (347)
T ss_dssp EEEEECTTSCEEEE
T ss_pred EEEEECCCCcEEEe
Confidence 889887 5555544
No 103
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.22 E-value=0.23 Score=50.66 Aligned_cols=182 Identities=12% Similarity=0.087 Sum_probs=97.7
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--C-CEEEEEecCCCCcccceEEEEeCCCCeEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--D-NKIFAIGGGNGLECFSDVEMLDLDIGKWI 433 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~-~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~ 433 (592)
+++.++.|+.++ .+..||..+.+.... +......-.++.+ + +.+++.||.+ ..+.+||..+.+-.
T Consensus 150 dg~~l~sgs~dg-----~v~iwd~~~~~~~~~--~~~h~~~v~~v~~s~~~~~~~~s~~~d-----g~v~~wd~~~~~~~ 217 (357)
T 4g56_B 150 DGTQAVSGGKDF-----SVKVWDLSQKAVLKS--YNAHSSEVNCVAACPGKDTIFLSCGED-----GRILLWDTRKPKPA 217 (357)
T ss_dssp SSSEEEEEETTS-----CEEEEETTTTEEEEE--ECCCSSCEEEEEECTTCSSCEEEEETT-----SCEEECCTTSSSCB
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCcEEEE--EcCCCCCEEEEEEccCCCceeeeeccC-----CceEEEECCCCcee
Confidence 677888888663 578899988765432 1111122222222 3 3577777755 35778888776532
Q ss_pred EcccccCcccceEEEEE---CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--C-CEEEEEecC
Q 007704 434 RTRSMLQKRFALAAAEL---NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--N-GKLYALGGF 507 (592)
Q Consensus 434 ~i~~~p~~R~~~~a~~~---~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~-~~Lyv~GG~ 507 (592)
..-..........++.+ ++.+++.|+.+ ..+.+||+.+..-.. .+.........+.+ + +++++.|+.
T Consensus 218 ~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d-----~~i~~wd~~~~~~~~--~~~~~~~~v~~l~~sp~~~~~lasgs~ 290 (357)
T 4g56_B 218 TRIDFCASDTIPTSVTWHPEKDDTFACGDET-----GNVSLVNIKNPDSAQ--TSAVHSQNITGLAYSYHSSPFLASISE 290 (357)
T ss_dssp CBCCCTTCCSCEEEEEECTTSTTEEEEEESS-----SCEEEEESSCGGGCE--EECCCSSCEEEEEECSSSSCCEEEEET
T ss_pred eeeeeccccccccchhhhhcccceEEEeecc-----cceeEEECCCCcEeE--EEeccceeEEEEEEcCCCCCEEEEEeC
Confidence 22121111122222333 45677777755 357888887654211 11111111223333 3 467777776
Q ss_pred CCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEE--ECCEEEEEecccCCCccccEEEEEcCC
Q 007704 508 DGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAV--VKEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 508 ~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v--~~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
++ .+.+||..+.+.... +.....-.+++. .++.+++.||.++ .|.+||..
T Consensus 291 D~-----~i~iwd~~~~~~~~~--~~H~~~V~~vafsP~d~~~l~s~s~Dg------~v~iW~~~ 342 (357)
T 4g56_B 291 DC-----TVAVLDADFSEVFRD--LSHRDFVTGVAWSPLDHSKFTTVGWDH------KVLHHHLP 342 (357)
T ss_dssp TS-----CEEEECTTSCEEEEE--CCCSSCEEEEEECSSSTTEEEEEETTS------CEEEEECC
T ss_pred CC-----EEEEEECCCCcEeEE--CCCCCCEEEEEEeCCCCCEEEEEcCCC------eEEEEECC
Confidence 54 488899988765443 222222223333 2567888888754 38888864
No 104
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.15 E-value=1.3 Score=49.55 Aligned_cols=205 Identities=14% Similarity=0.058 Sum_probs=111.8
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCC--------cccceEEEEeCC
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGL--------ECFSDVEMLDLD 428 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~--------~~~~~v~~yD~~ 428 (592)
+++.++++-..++....+++++|..+++......++.......+-+-+|+.++++..+.. .....++++++.
T Consensus 131 DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~ 210 (695)
T 2bkl_A 131 DGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLG 210 (695)
T ss_dssp TSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETT
T ss_pred CCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECC
Confidence 677777665443344468999999998864111222222122222337777777665432 234569999998
Q ss_pred CCeE--EEcccccCc-ccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEECCEEEEE
Q 007704 429 IGKW--IRTRSMLQK-RFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVLNGKLYAL 504 (592)
Q Consensus 429 t~~W--~~i~~~p~~-R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~~~~Lyv~ 504 (592)
+..- ..+...+.. ......... +|+..+++..+.. ..+.++++|..+..|..+..-.... ...+..++.+|+.
T Consensus 211 t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~l~~~~~~~~~~~~l~~~~~~~--~~~~~~~g~l~~~ 287 (695)
T 2bkl_A 211 TEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW-SENDVYWKRPGEKDFRLLVKGVGAK--YEVHAWKDRFYVL 287 (695)
T ss_dssp SCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT-TEEEEEEECTTCSSCEEEEECSSCC--EEEEEETTEEEEE
T ss_pred CCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC-CceEEEEEcCCCCceEEeecCCCce--EEEEecCCcEEEE
Confidence 7752 233222221 122222222 4554444443321 3467888888777888875433222 2223356666665
Q ss_pred ecCCCCCCCCeEEEEeCCCCe---EEEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEEEEEcCC
Q 007704 505 GGFDGSAMVPSIEVYDPRLGS---WMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 505 GG~~~~~~~~~v~~yD~~t~~---W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
...+ .....++.+|+.+.. |+.+-+.........+...++.+++.+..++. ..++++++.
T Consensus 288 s~~~--~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~----~~l~~~~~~ 350 (695)
T 2bkl_A 288 TDEG--APRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDAT----SEVRVATLK 350 (695)
T ss_dssp ECTT--CTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTE----EEEEEEETT
T ss_pred ECCC--CCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCE----EEEEEEeCC
Confidence 4432 224579999987654 88775332122223344458888887765432 568888865
No 105
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.13 E-value=0.78 Score=45.51 Aligned_cols=194 Identities=11% Similarity=0.018 Sum_probs=101.1
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEE-ECCEEEEEecCCCCcccceEEEEeCCCCeEEEc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGAT-IDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRT 435 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i 435 (592)
+++||+.+..+ ..+++||+.++++..+...+ ...-.+++. -++++|+.+.... .....+++||+.+++...+
T Consensus 55 ~g~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~~-~~~~~i~~~d~~~~~~~~~ 127 (333)
T 2dg1_A 55 QGQLFLLDVFE-----GNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGDF-KSTGGIFAATENGDNLQDI 127 (333)
T ss_dssp TSCEEEEETTT-----CEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTTS-SSCCEEEEECTTSCSCEEE
T ss_pred CCCEEEEECCC-----CEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCCC-CCCceEEEEeCCCCEEEEE
Confidence 67788876543 46999999998876653111 112223333 2678888764321 1124789999998876532
Q ss_pred -ccccCcccceEEEEE-CCEEEEEeccC-CCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CC-EEEEEecCCCC
Q 007704 436 -RSMLQKRFALAAAEL-NGVLYATGGYD-GNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NG-KLYALGGFDGS 510 (592)
Q Consensus 436 -~~~p~~R~~~~a~~~-~g~IYV~GG~~-~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~-~Lyv~GG~~~~ 510 (592)
........-..++.. ++.+|+..... .......++++|+.+.....+.... .....++.- ++ .||+....
T Consensus 128 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~i~~~~dg~~l~v~~~~--- 202 (333)
T 2dg1_A 128 IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNI--SVANGIALSTDEKVLWVTETT--- 202 (333)
T ss_dssp ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEE--SSEEEEEECTTSSEEEEEEGG---
T ss_pred EccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCC--CcccceEECCCCCEEEEEeCC---
Confidence 222111111222222 67888865321 1112357899999887766543110 111223322 44 57776532
Q ss_pred CCCCeEEEEeCCCC--eEEEcC-----CCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 511 AMVPSIEVYDPRLG--SWMSGE-----PMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 511 ~~~~~v~~yD~~t~--~W~~v~-----~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
...+++||+.++ ....+. ..+.......++.- ++.+|+....+ ..|.+||++
T Consensus 203 --~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~------~~v~~~d~~ 262 (333)
T 2dg1_A 203 --ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQ------GRVLVFNKR 262 (333)
T ss_dssp --GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETT------TEEEEECTT
T ss_pred --CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCC------CEEEEECCC
Confidence 246889998542 332211 11111111223332 46777765322 458888886
No 106
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.12 E-value=0.65 Score=45.87 Aligned_cols=145 Identities=9% Similarity=0.087 Sum_probs=76.0
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeEEEcc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTR 436 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~ 436 (592)
++.+++.|+.+ ..+..||..+..-...-.............-+++.++.|+.+ ..+.+||..+++-...
T Consensus 24 ~~~~l~s~~~d-----g~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d-----~~i~vwd~~~~~~~~~- 92 (304)
T 2ynn_A 24 TEPWVLTTLYS-----GRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVVD- 92 (304)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEEE-
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC-----CEEEEEECCCCcEEEE-
Confidence 67778888866 368888988876432211111111111222366777787754 4688899887753221
Q ss_pred cccC-cccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCC-CCCceeEEEEE--CCEEEEEecCCCCC
Q 007704 437 SMLQ-KRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMN-RRRGCHSLAVL--NGKLYALGGFDGSA 511 (592)
Q Consensus 437 ~~p~-~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p-~~R~~~s~v~~--~~~Lyv~GG~~~~~ 511 (592)
+.. ...-.+++.. ++.+++.|+.+ ..+.+||+.++. .....+. ....-.+++.. ++.+++.|+.++
T Consensus 93 -~~~h~~~v~~~~~~~~~~~l~sgs~D-----~~v~lWd~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~-- 163 (304)
T 2ynn_A 93 -FEAHPDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR-- 163 (304)
T ss_dssp -EECCSSCEEEEEECSSSSEEEEEETT-----SCEEEEEGGGTT-EEEEEECCCCSCEEEEEECTTCTTEEEEEETTS--
T ss_pred -EeCCCCcEEEEEEcCCCCEEEEECCC-----CeEEEEECCCCc-chhhhhcccCCcEEEEEECCCCCCEEEEEeCCC--
Confidence 111 1111222222 55667777765 357778876542 1111111 11112222222 456788888764
Q ss_pred CCCeEEEEeCCCC
Q 007704 512 MVPSIEVYDPRLG 524 (592)
Q Consensus 512 ~~~~v~~yD~~t~ 524 (592)
.+.+||..+.
T Consensus 164 ---~v~iwd~~~~ 173 (304)
T 2ynn_A 164 ---TVKVWSLGQS 173 (304)
T ss_dssp ---EEEEEETTCS
T ss_pred ---eEEEEECCCC
Confidence 5788887553
No 107
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.02 E-value=0.68 Score=45.88 Aligned_cols=194 Identities=8% Similarity=0.066 Sum_probs=94.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEE-EECCEEEEEecCCCCcccceEEEEeCCCCe----
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGA-TIDNKIFAIGGGNGLECFSDVEMLDLDIGK---- 431 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~-~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~---- 431 (592)
+++.++.|+.+ ..+..||..+.+....-..+. .-.+++ .-+++.++.++.+.......+.+||..+..
T Consensus 85 ~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~ 157 (369)
T 3zwl_B 85 FTKYCVTGSAD-----YSIKLWDVSNGQCVATWKSPV--PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHE 157 (369)
T ss_dssp TSSEEEEEETT-----TEEEEEETTTCCEEEEEECSS--CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCC
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEeecCC--CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCcccee
Confidence 56777788765 368899988876544322111 111222 225667777665422333567777765432
Q ss_pred EEEcccccC-----ccc--ceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCC-CeEEEeccCCCCCceeEEEEE-CCE
Q 007704 432 WIRTRSMLQ-----KRF--ALAAAEL--NGVLYATGGYDGNEYMNSAERFDPRE-HYWTKIANMNRRRGCHSLAVL-NGK 500 (592)
Q Consensus 432 W~~i~~~p~-----~R~--~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t-~~W~~i~~~p~~R~~~s~v~~-~~~ 500 (592)
+......+. ... ....+.+ ++..+++|+.+ ..+.+||+.+ ..-...-... .....+++.. ++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~ 231 (369)
T 3zwl_B 158 LTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD-----GKISKYDVSNNYEYVDSIDLH-EKSISDMQFSPDLT 231 (369)
T ss_dssp EEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT-----SEEEEEETTTTTEEEEEEECC-SSCEEEEEECTTSS
T ss_pred ecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC-----CEEEEEECCCCcEeEEEEecC-CCceeEEEECCCCC
Confidence 211111110 000 2222222 45666667654 4688999987 3322211111 1112222222 667
Q ss_pred EEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCcc--------ccEEEEEcCC
Q 007704 501 LYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEI--------VDTVERFKEG 570 (592)
Q Consensus 501 Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~--------~~~v~~Yd~~ 570 (592)
.++.|+.+ ..+.+||..+......-. .......++.. ++..+++|+..+.... ...+.+||..
T Consensus 232 ~l~~~~~d-----~~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 303 (369)
T 3zwl_B 232 YFITSSRD-----TNSFLVDVSTLQVLKKYE--TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKI 303 (369)
T ss_dssp EEEEEETT-----SEEEEEETTTCCEEEEEE--CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETT
T ss_pred EEEEecCC-----ceEEEEECCCCceeeeec--CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecC
Confidence 77777754 368899988765443322 11112222222 4555666654432111 1157777764
No 108
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.01 E-value=1.4 Score=43.37 Aligned_cols=188 Identities=11% Similarity=0.032 Sum_probs=98.7
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEE-ECCEEEEEecCCCCcccceEEEEeCCCCeEEEc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGAT-IDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRT 435 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i 435 (592)
++.||+..-.. ..+++||+.++....... +. + -.+++. -++++|+.. ...+++||+.+++++.+
T Consensus 24 ~~~l~~~d~~~-----~~i~~~d~~~~~~~~~~~-~~-~-~~~i~~~~dG~l~v~~-------~~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 24 SNSLLFVDIPA-----KKVCRWDSFTKQVQRVTM-DA-P-VSSVALRQSGGYVATI-------GTKFCALNWKEQSAVVL 88 (297)
T ss_dssp TTEEEEEETTT-----TEEEEEETTTCCEEEEEC-SS-C-EEEEEEBTTSSEEEEE-------TTEEEEEETTTTEEEEE
T ss_pred CCEEEEEECCC-----CEEEEEECCCCcEEEEeC-CC-c-eEEEEECCCCCEEEEE-------CCeEEEEECCCCcEEEE
Confidence 47888876533 578999999876644321 11 1 112222 267776653 25789999999998876
Q ss_pred ccccC----cccceEEEEECCEEEEEeccCCC------CCCCeeEEEeCCCCeEEEe-ccCCCCCceeEEEEE-C-CEEE
Q 007704 436 RSMLQ----KRFALAAAELNGVLYATGGYDGN------EYMNSAERFDPREHYWTKI-ANMNRRRGCHSLAVL-N-GKLY 502 (592)
Q Consensus 436 ~~~p~----~R~~~~a~~~~g~IYV~GG~~~~------~~~~~v~~yD~~t~~W~~i-~~~p~~R~~~s~v~~-~-~~Ly 502 (592)
..... .+....++--+|++|+..-.... .....++++|+.. ....+ ..... ...++.. + ..||
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~---pngi~~spdg~~ly 164 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDI---SNGLDWSLDHKIFY 164 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESB---EEEEEECTTSCEEE
T ss_pred EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeecccc---ccceEEcCCCCEEE
Confidence 54321 12222222226788874321110 1234688898864 33332 11111 1223333 3 4688
Q ss_pred EEecCCCCCCCCeEEEEeC--CCCeEEE---cCCCCCC-CcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC-CcEE
Q 007704 503 ALGGFDGSAMVPSIEVYDP--RLGSWMS---GEPMKLS-RGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG-QGWE 574 (592)
Q Consensus 503 v~GG~~~~~~~~~v~~yD~--~t~~W~~---v~~lp~~-R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~W~ 574 (592)
+.... ...|++||. .+..... +..++.. .....+++- ++.||+..... ..|.+||++ .+..
T Consensus 165 v~~~~-----~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~------~~v~~~d~~tG~~~ 233 (297)
T 3g4e_A 165 YIDSL-----SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG------GRVIRLDPVTGKRL 233 (297)
T ss_dssp EEEGG-----GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT------TEEEEECTTTCCEE
T ss_pred EecCC-----CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC------CEEEEEcCCCceEE
Confidence 87643 246888875 4544421 1122211 112233332 57788764321 459999997 5543
No 109
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=94.99 E-value=3.3 Score=41.64 Aligned_cols=211 Identities=9% Similarity=-0.085 Sum_probs=107.7
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeEEEcc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTR 436 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~ 436 (592)
+++.++++...+. ...+|.+|+.+.+...+...+.........+-+++.++++..+ ..++++|+.+++-+.+.
T Consensus 46 Dg~~l~~~~~~~g--~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~-----~~l~~~d~~~g~~~~~~ 118 (388)
T 3pe7_A 46 DGSKLLFGGAFDG--PWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG-----RNLMRVDLATLEENVVY 118 (388)
T ss_dssp TSCEEEEEECTTS--SCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT-----TEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEEcCCC--CceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC-----CeEEEEECCCCcceeee
Confidence 5665666654222 2479999999999888765443322222334466555554422 47999999998766655
Q ss_pred cccCcccceEEEE--ECCEEEEEec---cC--------------CCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE
Q 007704 437 SMLQKRFALAAAE--LNGVLYATGG---YD--------------GNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL 497 (592)
Q Consensus 437 ~~p~~R~~~~a~~--~~g~IYV~GG---~~--------------~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~ 497 (592)
..+.......... -+++.++.-- .+ .......++++|+.++.-..+...+. ...+....-
T Consensus 119 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~~~~~~sp 197 (388)
T 3pe7_A 119 QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQ-WLGHPIYRP 197 (388)
T ss_dssp ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESS-CEEEEEEET
T ss_pred echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCc-cccccEECC
Confidence 4444322222221 2333333110 00 01123679999999887666543221 122222222
Q ss_pred -CCEEEEEecCCC-CCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC-CcE
Q 007704 498 -NGKLYALGGFDG-SAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG-QGW 573 (592)
Q Consensus 498 -~~~Lyv~GG~~~-~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~W 573 (592)
+++.+++..... ......++.+|......+.+............+.. +++.+++...... .....+++||+. ..-
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKG-SPDRFIYSADPETLEN 276 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETT-CCCEEEEEECTTTCCE
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCC-CCcceEEEEecCCCce
Confidence 455444433221 12345799999988777766543221111122222 5553333332221 111359999987 554
Q ss_pred EEc
Q 007704 574 EEI 576 (592)
Q Consensus 574 ~~v 576 (592)
..+
T Consensus 277 ~~l 279 (388)
T 3pe7_A 277 RQL 279 (388)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 110
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=94.98 E-value=0.71 Score=46.54 Aligned_cols=151 Identities=13% Similarity=0.207 Sum_probs=83.6
Q ss_pred CCEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcc--cceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEE
Q 007704 404 DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKR--FALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWT 480 (592)
Q Consensus 404 ~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R--~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~ 480 (592)
++++++.||.+ ..+.+||..+++|.....+.... .-.+++.. ++.+++.|+.++ .+.+||..+..+.
T Consensus 27 ~g~~las~~~D-----~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~-----~v~iw~~~~~~~~ 96 (345)
T 3fm0_A 27 AGTLLASCGGD-----RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA-----TTCIWKKNQDDFE 96 (345)
T ss_dssp TSSCEEEEETT-----SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECCC-EE
T ss_pred CCCEEEEEcCC-----CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC-----cEEEEEccCCCeE
Confidence 67888888865 36788888888876433222211 11122222 567777887663 4677887777766
Q ss_pred EeccCCCCCceeEEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCC-eEEEcCCCCCCCcceEEEEE--CCEEEEEeccc
Q 007704 481 KIANMNRRRGCHSLAVL--NGKLYALGGFDGSAMVPSIEVYDPRLG-SWMSGEPMKLSRGYLGAAVV--KEAIYVIGGVK 555 (592)
Q Consensus 481 ~i~~~p~~R~~~s~v~~--~~~Lyv~GG~~~~~~~~~v~~yD~~t~-~W~~v~~lp~~R~~~s~~v~--~~~Iyv~GG~~ 555 (592)
.+..+......-..+.+ ++.+++.|+.++ .+.+||..+. .+..+..+.........+.+ ++.+++.|+.+
T Consensus 97 ~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~-----~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d 171 (345)
T 3fm0_A 97 CVTTLEGHENEVKSVAWAPSGNLLATCSRDK-----SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD 171 (345)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETT
T ss_pred EEEEccCCCCCceEEEEeCCCCEEEEEECCC-----eEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCC
Confidence 55444322222233333 677888888764 4777887654 33333222211122222223 46677777765
Q ss_pred CCCccccEEEEEcCC-CcEEE
Q 007704 556 NGSEIVDTVERFKEG-QGWEE 575 (592)
Q Consensus 556 ~~~~~~~~v~~Yd~~-~~W~~ 575 (592)
+ .|.+||.. ..|..
T Consensus 172 ~------~i~~w~~~~~~~~~ 186 (345)
T 3fm0_A 172 D------TVKLYREEEDDWVC 186 (345)
T ss_dssp S------CEEEEEEETTEEEE
T ss_pred C------cEEEEEecCCCEEE
Confidence 3 37777766 66654
No 111
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=94.95 E-value=0.77 Score=47.66 Aligned_cols=180 Identities=13% Similarity=0.178 Sum_probs=92.6
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
++.+++.||.++ .+..||..+.+-.. .+......-.++.+ ++..++.|+.+ ..+.+||..++.-..
T Consensus 161 ~~~~l~sgs~D~-----~i~iwd~~~~~~~~--~~~~h~~~V~~v~~~p~~~~l~s~s~D-----~~i~~wd~~~~~~~~ 228 (410)
T 1vyh_C 161 SGKLLASCSADM-----TIKLWDFQGFECIR--TMHGHDHNVSSVSIMPNGDHIVSASRD-----KTIKMWEVQTGYCVK 228 (410)
T ss_dssp TSSEEEEEETTS-----CCCEEETTSSCEEE--CCCCCSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCEEE
T ss_pred CCCEEEEEeCCC-----eEEEEeCCCCceeE--EEcCCCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEE
Confidence 567778888664 35677776654332 22222222233333 56777788755 478899998875432
Q ss_pred cccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE---------------
Q 007704 435 TRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--------------- 497 (592)
Q Consensus 435 i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--------------- 497 (592)
. +.........+.. ++.+++.|+.+ ..+.+||+.+......- ......-.++.+
T Consensus 229 ~--~~~h~~~v~~~~~~~~g~~l~s~s~D-----~~v~vwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~~~~~~~~ 299 (410)
T 1vyh_C 229 T--FTGHREWVRMVRPNQDGTLIASCSND-----QTVRVWVVATKECKAEL--REHRHVVECISWAPESSYSSISEATGS 299 (410)
T ss_dssp E--EECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEE--CCCSSCEEEEEECCSCGGGGGGGCCSC
T ss_pred E--EeCCCccEEEEEECCCCCEEEEEcCC-----CeEEEEECCCCceeeEe--cCCCceEEEEEEcCcccccchhhhccc
Confidence 1 1111111112222 56777777765 35778888776543221 000000111111
Q ss_pred -------CCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecccCCCccccEEEEEc
Q 007704 498 -------NGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERFK 568 (592)
Q Consensus 498 -------~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd 568 (592)
.+.+++.|+.++ .+.+||..+..-... +.........+.+ ++..++.||.+ ..|.+||
T Consensus 300 ~~~~~~~~g~~l~sgs~D~-----~i~iwd~~~~~~~~~--~~~h~~~v~~v~~~~~g~~l~s~s~D------~~i~vwd 366 (410)
T 1vyh_C 300 ETKKSGKPGPFLLSGSRDK-----TIKMWDVSTGMCLMT--LVGHDNWVRGVLFHSGGKFILSCADD------KTLRVWD 366 (410)
T ss_dssp C-------CCEEEEEETTS-----EEEEEETTTTEEEEE--EECCSSCEEEEEECSSSSCEEEEETT------TEEEEEC
T ss_pred cccccCCCCCEEEEEeCCC-----eEEEEECCCCceEEE--EECCCCcEEEEEEcCCCCEEEEEeCC------CeEEEEE
Confidence 255777777653 588899887642211 1111111222222 45666667754 3588888
Q ss_pred CC
Q 007704 569 EG 570 (592)
Q Consensus 569 ~~ 570 (592)
..
T Consensus 367 ~~ 368 (410)
T 1vyh_C 367 YK 368 (410)
T ss_dssp CT
T ss_pred CC
Confidence 75
No 112
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=94.95 E-value=1.6 Score=42.91 Aligned_cols=185 Identities=11% Similarity=-0.029 Sum_probs=98.9
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCe--EEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCC--eE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDE--WTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIG--KW 432 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~--W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~--~W 432 (592)
.+++++.|..+ +.+..+|..+++ |+.-..-. ...+...+.-+++|++.+ .+.+..||+ ++ .|
T Consensus 4 ~~~~lv~~~~~-----~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~ilvs~-------~~~V~~~d~-~G~~~W 69 (276)
T 3no2_A 4 PQHLLVGGSGW-----NKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEILFSY-------SKGAKMITR-DGRELW 69 (276)
T ss_dssp CCEEEEECTTC-----SEEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCEEEEC-------BSEEEEECT-TSCEEE
T ss_pred CCcEEEeeCCC-----CEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCEEEeC-------CCCEEEECC-CCCEEE
Confidence 46777776644 578899987774 65432110 122333344488888843 246899999 55 36
Q ss_pred EEcccccCcccceEEEE-ECCEEEEEeccCCCCCCCeeEEEeCCCCe-EEEec--cCCCC--CceeEEEEECCEEEEEec
Q 007704 433 IRTRSMLQKRFALAAAE-LNGVLYATGGYDGNEYMNSAERFDPREHY-WTKIA--NMNRR--RGCHSLAVLNGKLYALGG 506 (592)
Q Consensus 433 ~~i~~~p~~R~~~~a~~-~~g~IYV~GG~~~~~~~~~v~~yD~~t~~-W~~i~--~~p~~--R~~~s~v~~~~~Lyv~GG 506 (592)
+.-.+ .....+++.. .++++++..+.+ ...++.+|+.... |+... ..+.+ .........++.+++...
T Consensus 70 ~~~~~--~~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~ 143 (276)
T 3no2_A 70 NIAAP--AGCEMQTARILPDGNALVAWCGH----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF 143 (276)
T ss_dssp EEECC--TTCEEEEEEECTTSCEEEEEEST----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET
T ss_pred EEcCC--CCccccccEECCCCCEEEEecCC----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEec
Confidence 54331 1112223333 367776665421 2467888885543 54321 11111 111122223666666544
Q ss_pred CCCCCCCCeEEEEeCCCC-eEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC---CcEEEc
Q 007704 507 FDGSAMVPSIEVYDPRLG-SWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG---QGWEEI 576 (592)
Q Consensus 507 ~~~~~~~~~v~~yD~~t~-~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~---~~W~~v 576 (592)
. ...+.+||+.-. .|+.-.+ ...+++... ++.++|.+..+ ..|..+|++ -.|+.-
T Consensus 144 ~-----~~~v~~~d~~G~~~w~~~~~----~~~~~~~~~~~g~~~v~~~~~------~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 144 A-----TSEVREIAPNGQLLNSVKLS----GTPFSSAFLDNGDCLVACGDA------HCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp T-----TTEEEEECTTSCEEEEEECS----SCCCEEEECTTSCEEEECBTT------SEEEEECTTTCCEEEEEE
T ss_pred C-----CCEEEEECCCCCEEEEEECC----CCccceeEcCCCCEEEEeCCC------CeEEEEeCcCCcEEEEec
Confidence 2 246889998732 3665332 112334444 67788776642 459999987 347764
No 113
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.94 E-value=2.9 Score=42.61 Aligned_cols=102 Identities=15% Similarity=0.206 Sum_probs=54.5
Q ss_pred CCEEEEEeccCCCCCCCeeEEEeCCCC--eEEEeccCCCCCceeEEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCeEE
Q 007704 451 NGVLYATGGYDGNEYMNSAERFDPREH--YWTKIANMNRRRGCHSLAVL-NGKLYALGGFDGSAMVPSIEVYDPRLGSWM 527 (592)
Q Consensus 451 ~g~IYV~GG~~~~~~~~~v~~yD~~t~--~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~ 527 (592)
++.+++.|+.+ ..+.+||+... .-..+..- ...-.+++.. ++..++.|+.++ .+.+||..+..-.
T Consensus 217 ~~~~l~sgs~D-----~~v~~wd~~~~~~~~~~~~~h--~~~v~~v~~~p~~~~l~s~s~D~-----~i~lwd~~~~~~~ 284 (380)
T 3iz6_a 217 NANMFISGSCD-----TTVRLWDLRITSRAVRTYHGH--EGDINSVKFFPDGQRFGTGSDDG-----TCRLFDMRTGHQL 284 (380)
T ss_dssp SCCEEEEEETT-----SCEEEEETTTTCCCCEEECCC--SSCCCEEEECTTSSEEEEECSSS-----CEEEEETTTTEEE
T ss_pred CCCEEEEEECC-----CeEEEEECCCCCcceEEECCc--CCCeEEEEEecCCCeEEEEcCCC-----eEEEEECCCCcEE
Confidence 56788888766 35778887632 11212111 1111222222 677888888764 4888999887544
Q ss_pred Ec-CCCCCC----Cc-ceEEEE-ECCEEEEEecccCCCccccEEEEEcCC
Q 007704 528 SG-EPMKLS----RG-YLGAAV-VKEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 528 ~v-~~lp~~----R~-~~s~~v-~~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.. ...+.. .. ..+++. .++.+++.|+.++ .|.+||..
T Consensus 285 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg------~i~vwd~~ 328 (380)
T 3iz6_a 285 QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG------DCYVWDTL 328 (380)
T ss_dssp EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS------CEEEEETT
T ss_pred EEecccccccccccCceEEEEECCCCCEEEEEECCC------CEEEEECC
Confidence 32 111110 11 122222 2567777776543 48888875
No 114
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.91 E-value=1.2 Score=44.85 Aligned_cols=192 Identities=8% Similarity=0.015 Sum_probs=97.6
Q ss_pred EEEECCEEEEEeeCCCCCCcceEEEEECCCCe-------EEECCCCCCCCcceEEE-EEC----C---EEEEEecCCCCc
Q 007704 353 AAMLNGELYIFGGGDGNSWHNTVESYSPANDE-------WTSRPSLNGTKGSLAGA-TID----N---KIFAIGGGNGLE 417 (592)
Q Consensus 353 ~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~-------W~~l~~lp~~r~~~~~~-~~~----~---~Iyv~GG~~~~~ 417 (592)
.+.....+++.||.+ ..+..||..+.. ...+.....+ -.+++ .-+ + ++++.|+.+
T Consensus 21 ~~~~~~~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~h~~~--v~~~~~~~~~~~~g~~~~~l~s~~~d--- 90 (397)
T 1sq9_A 21 SVSACNSFTVSCSGD-----GYLKVWDNKLLDNENPKDKSYSHFVHKSG--LHHVDVLQAIERDAFELCLVATTSFS--- 90 (397)
T ss_dssp EEEECSSEEEEEETT-----SEEEEEESBCCTTCCGGGGEEEEECCTTC--EEEEEEEEEEETTTEEEEEEEEEETT---
T ss_pred EEEecCCeEEEEcCC-----CEEEEEECCCcccccCCCcceEEecCCCc--EEEEEEecccccCCccccEEEEEcCC---
Confidence 334455777888766 368888888765 3333211111 12222 224 6 788888754
Q ss_pred ccceEEEEeCCCCe------EEEcccccCc---ccceEEEEE-----CCEE-EEEeccCCCCCCCeeEEEeCCC------
Q 007704 418 CFSDVEMLDLDIGK------WIRTRSMLQK---RFALAAAEL-----NGVL-YATGGYDGNEYMNSAERFDPRE------ 476 (592)
Q Consensus 418 ~~~~v~~yD~~t~~------W~~i~~~p~~---R~~~~a~~~-----~g~I-YV~GG~~~~~~~~~v~~yD~~t------ 476 (592)
..+.+||..+.. +..+...+.. ..-.+++.. ++.. ++.|+.+ ..+.+||+.+
T Consensus 91 --g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 91 --GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-----GTTYIWKFHPFADESN 163 (397)
T ss_dssp --SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-----SCEEEEEEESSSSHHH
T ss_pred --CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-----CcEEEEeCCccccccc
Confidence 467888887766 6655443211 122223333 4555 7777755 3567777665
Q ss_pred Ce---EE---Eecc-----CCCCCceeEEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCC-C-C--CCcceE
Q 007704 477 HY---WT---KIAN-----MNRRRGCHSLAVL-NGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPM-K-L--SRGYLG 540 (592)
Q Consensus 477 ~~---W~---~i~~-----~p~~R~~~s~v~~-~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~l-p-~--~R~~~s 540 (592)
.. |. .+.. ........++... ++ +++.|+.+ ..+.+||..+......-.. . . ......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~ 237 (397)
T 1sq9_A 164 SLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN-----GTVQISELSTLRPLYNFESQHSMINNSNSIR 237 (397)
T ss_dssp HTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-----SEEEEEETTTTEEEEEEECCC---CCCCCEE
T ss_pred cceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC-----CcEEEEECCCCceeEEEeccccccccCCccc
Confidence 21 21 1110 1112222233333 56 77777754 3688999987654332111 0 1 022222
Q ss_pred EEEE--CCEEEEEecccCCCccccEEEEEcCC
Q 007704 541 AAVV--KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 541 ~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.+.+ ++.+++.|+.++. ...|.+||..
T Consensus 238 ~i~~~~~~~~l~~~~~d~~---~g~i~i~d~~ 266 (397)
T 1sq9_A 238 SVKFSPQGSLLAIAHDSNS---FGCITLYETE 266 (397)
T ss_dssp EEEECSSTTEEEEEEEETT---EEEEEEEETT
T ss_pred eEEECCCCCEEEEEecCCC---CceEEEEECC
Confidence 3333 5667777775411 1358888875
No 115
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=94.90 E-value=0.32 Score=49.62 Aligned_cols=183 Identities=11% Similarity=0.110 Sum_probs=87.3
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCC--CCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLN--GTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKW 432 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp--~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W 432 (592)
++++ +.|+.++ .+..||+.+++-....... .....-.++.+ +++.++.|+.+ ..+.+||..+++-
T Consensus 105 d~~~-l~~s~dg-----~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d-----g~v~iwd~~~~~~ 173 (357)
T 4g56_B 105 EKGI-LVASDSG-----AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD-----FSVKVWDLSQKAV 173 (357)
T ss_dssp TTEE-EEEETTS-----CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT-----SCEEEEETTTTEE
T ss_pred CCCE-EEEECCC-----EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC-----CeEEEEECCCCcE
Confidence 4554 4566543 4778887776433222111 11111122222 67788888765 3578899988764
Q ss_pred EEcccccCcccc-eEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE---CCEEEEEec
Q 007704 433 IRTRSMLQKRFA-LAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL---NGKLYALGG 506 (592)
Q Consensus 433 ~~i~~~p~~R~~-~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~---~~~Lyv~GG 506 (592)
... +...... .+++.. ++.+++.||.+ ..+.+||+.+..-...............+.+ ++.+++.|+
T Consensus 174 ~~~--~~~h~~~v~~v~~s~~~~~~~~s~~~d-----g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~ 246 (357)
T 4g56_B 174 LKS--YNAHSSEVNCVAACPGKDTIFLSCGED-----GRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD 246 (357)
T ss_dssp EEE--ECCCSSCEEEEEECTTCSSCEEEEETT-----SCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE
T ss_pred EEE--EcCCCCCEEEEEEccCCCceeeeeccC-----CceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEee
Confidence 332 1111111 122222 33577777765 3577888877653322222222222233343 466888887
Q ss_pred CCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE--CC-EEEEEecccCCCccccEEEEEcCC
Q 007704 507 FDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV--KE-AIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 507 ~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~--~~-~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.++ .+.+||..+..-.. .+.........+.+ ++ .+++.|+.++ .|.+||..
T Consensus 247 ~d~-----~i~~wd~~~~~~~~--~~~~~~~~v~~l~~sp~~~~~lasgs~D~------~i~iwd~~ 300 (357)
T 4g56_B 247 ETG-----NVSLVNIKNPDSAQ--TSAVHSQNITGLAYSYHSSPFLASISEDC------TVAVLDAD 300 (357)
T ss_dssp SSS-----CEEEEESSCGGGCE--EECCCSSCEEEEEECSSSSCCEEEEETTS------CEEEECTT
T ss_pred ccc-----ceeEEECCCCcEeE--EEeccceeEEEEEEcCCCCCEEEEEeCCC------EEEEEECC
Confidence 653 47888987653111 11111112222223 33 5666676543 48888876
No 116
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=94.85 E-value=1.5 Score=45.09 Aligned_cols=144 Identities=18% Similarity=0.291 Sum_probs=79.0
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
+++.++.|+.+ ..+..||..+.+.... +.........+.+ ++..++.|+.+ ..+.+||..+++...
T Consensus 134 dg~~l~s~~~d-----~~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 134 DGKFLATGAED-----RLIRIWDIENRKIVMI--LQGHEQDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRTGQCSL 201 (393)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcEEEE--EccCCCCEEEEEEcCCCCEEEEecCC-----CcEEEEECCCCeeEE
Confidence 67788888866 3688899988765432 1111111222222 56677777754 468889998876543
Q ss_pred cccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEe-ccCC---C-CCceeEEEEE--CCEEEEEe
Q 007704 435 TRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKI-ANMN---R-RRGCHSLAVL--NGKLYALG 505 (592)
Q Consensus 435 i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i-~~~p---~-~R~~~s~v~~--~~~Lyv~G 505 (592)
.-... ..-.+++.. ++.+++.|+.+ ..+.+||+.++.-... .... . ....-..+.+ ++..++.|
T Consensus 202 ~~~~~--~~v~~~~~~~~~~~~l~~~s~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~ 274 (393)
T 1erj_A 202 TLSIE--DGVTTVAVSPGDGKYIAAGSLD-----RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 274 (393)
T ss_dssp EEECS--SCEEEEEECSTTCCEEEEEETT-----SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEcC--CCcEEEEEECCCCCEEEEEcCC-----CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEE
Confidence 22211 111222222 56788888766 3578899887754322 1111 1 1111222333 67777888
Q ss_pred cCCCCCCCCeEEEEeCCCC
Q 007704 506 GFDGSAMVPSIEVYDPRLG 524 (592)
Q Consensus 506 G~~~~~~~~~v~~yD~~t~ 524 (592)
+.++ .+.+||..+.
T Consensus 275 s~d~-----~v~~wd~~~~ 288 (393)
T 1erj_A 275 SLDR-----SVKLWNLQNA 288 (393)
T ss_dssp ETTS-----EEEEEEC---
T ss_pred eCCC-----EEEEEECCCC
Confidence 8653 5778887653
No 117
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=94.85 E-value=5.4 Score=44.68 Aligned_cols=120 Identities=16% Similarity=0.220 Sum_probs=73.9
Q ss_pred eEEEEECCEEEEEeeCCCCCCcceEEEEECCCC--eEEECCCCCCC--------CcceEEEEECCEEEEEecCCCCcccc
Q 007704 351 ASAAMLNGELYIFGGGDGNSWHNTVESYSPAND--EWTSRPSLNGT--------KGSLAGATIDNKIFAIGGGNGLECFS 420 (592)
Q Consensus 351 ~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~--~W~~l~~lp~~--------r~~~~~~~~~~~Iyv~GG~~~~~~~~ 420 (592)
.+.++.++.||+... .+.++.+|..++ .|+.-...+.. ....+.+..+++||+... ..
T Consensus 71 ~~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------dg 138 (677)
T 1kb0_A 71 ATPVVVDGIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------DG 138 (677)
T ss_dssp CCCEEETTEEEEECG------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT------TS
T ss_pred eCCEEECCEEEEECC------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC------CC
Confidence 445667999999865 256999999887 48765432211 112234557888888642 24
Q ss_pred eEEEEeCCCCe--EEEccc-c-cC-cccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCe--EEEe
Q 007704 421 DVEMLDLDIGK--WIRTRS-M-LQ-KRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHY--WTKI 482 (592)
Q Consensus 421 ~v~~yD~~t~~--W~~i~~-~-p~-~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~--W~~i 482 (592)
.++.+|..|++ |+.-.. - .. .....+.++.++.+|+..+.........++.||..+++ |+.-
T Consensus 139 ~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 139 RLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp EEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 78999998875 765322 1 11 11222334568888886543222234578999998875 8764
No 118
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=94.82 E-value=1.8 Score=48.45 Aligned_cols=205 Identities=11% Similarity=-0.046 Sum_probs=111.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEE-ECCEEEEEecCCCC-----------cccceEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGAT-IDNKIFAIGGGNGL-----------ECFSDVEM 424 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~Iyv~GG~~~~-----------~~~~~v~~ 424 (592)
+++.++++...++.....++++|..+++...... +.... ...+. -+++-++++..+.. .....+++
T Consensus 135 Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~-~~~~~-~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~ 212 (710)
T 2xdw_A 135 DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-ERVKF-SCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYY 212 (710)
T ss_dssp TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-EEECS-CCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEE
T ss_pred CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc-cCccc-ceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEE
Confidence 6777777664443434589999999998865411 11111 12222 26665555554332 22456899
Q ss_pred EeCCCCeEE--Eccccc-CcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCC------C--eEEEeccCCCCCcee
Q 007704 425 LDLDIGKWI--RTRSML-QKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPRE------H--YWTKIANMNRRRGCH 492 (592)
Q Consensus 425 yD~~t~~W~--~i~~~p-~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t------~--~W~~i~~~p~~R~~~ 492 (592)
+++.+++.. .+...+ .+......... +++..+++...+....+.++++|+.+ . .+..+..-..... .
T Consensus 213 ~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~-~ 291 (710)
T 2xdw_A 213 HVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY-D 291 (710)
T ss_dssp EETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE-E
T ss_pred EECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEE-E
Confidence 999887532 221111 12222222222 45444444332222247899999876 4 5777754322221 1
Q ss_pred EEEEECCEEEEEecCCCCCCCCeEEEEeCCCC---eEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEc
Q 007704 493 SLAVLNGKLYALGGFDGSAMVPSIEVYDPRLG---SWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFK 568 (592)
Q Consensus 493 s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~---~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd 568 (592)
....-++.||+.+..+. ....++.+|..+. .|+.+.+-........+... ++.+++....++ ...++++|
T Consensus 292 ~~s~dg~~l~~~s~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g----~~~l~~~~ 365 (710)
T 2xdw_A 292 YVTNEGTVFTFKTNRHS--PNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV----KNTLQLHD 365 (710)
T ss_dssp EEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETT----EEEEEEEE
T ss_pred EEeccCCEEEEEECCCC--CCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECC----EEEEEEEE
Confidence 22233778888875432 2457999998875 58887543221223344555 677777665433 25688888
Q ss_pred CC
Q 007704 569 EG 570 (592)
Q Consensus 569 ~~ 570 (592)
+.
T Consensus 366 ~~ 367 (710)
T 2xdw_A 366 LA 367 (710)
T ss_dssp TT
T ss_pred CC
Confidence 74
No 119
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=94.78 E-value=0.29 Score=48.88 Aligned_cols=111 Identities=15% Similarity=0.196 Sum_probs=61.9
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE----CCEEEEEecCCCCcccceEEEEeCCCCeE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI----DNKIFAIGGGNGLECFSDVEMLDLDIGKW 432 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~----~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W 432 (592)
+++.++.|+.+ ..+..||..++....+..+......-..+.+ ++.+++.|+.+ ..+.++|+.+++|
T Consensus 24 ~g~~lasgs~D-----~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D-----~~v~iWd~~~~~~ 93 (316)
T 3bg1_A 24 YGTRLATCSSD-----RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD-----RKVIIWREENGTW 93 (316)
T ss_dssp GGCEEEEEETT-----TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT-----SCEEEECCSSSCC
T ss_pred CCCEEEEEeCC-----CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC-----CEEEEEECCCCcc
Confidence 57778888866 3577888777654333222222222223333 26777888765 4678899988877
Q ss_pred EEcccccCcccc-eEEEEE-C--CEEEEEeccCCCCCCCeeEEEeCCCC-eEEEe
Q 007704 433 IRTRSMLQKRFA-LAAAEL-N--GVLYATGGYDGNEYMNSAERFDPREH-YWTKI 482 (592)
Q Consensus 433 ~~i~~~p~~R~~-~~a~~~-~--g~IYV~GG~~~~~~~~~v~~yD~~t~-~W~~i 482 (592)
..+..+...... .+++.. + +.+++.|+.+ ..+.+||..+. .|...
T Consensus 94 ~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D-----~~i~lwd~~~~~~~~~~ 143 (316)
T 3bg1_A 94 EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD-----GAISLLTYTGEGQWEVK 143 (316)
T ss_dssp CEEEEECCCSSCCCEEEECCTTTCSCEEEECSS-----SCEEEEEECSSSCEEEC
T ss_pred eEEEEccCCCCceEEEEECCCCCCcEEEEEcCC-----CCEEEEecCCCCCccee
Confidence 554332211111 122222 2 5677777765 34677777665 57543
No 120
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=94.77 E-value=3.7 Score=46.56 Aligned_cols=187 Identities=9% Similarity=0.129 Sum_probs=105.5
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCC-Cc-ceEEE-EECCEEEEEecCCCCcccceEEEEeCCCCeEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGT-KG-SLAGA-TIDNKIFAIGGGNGLECFSDVEMLDLDIGKWI 433 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~-r~-~~~~~-~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~ 433 (592)
++.|+|- .. +-+.+||+.+++.......... .. -.+++ .-++.|||... ..+++||+.++++.
T Consensus 98 ~g~lWig-T~------~Gl~~yd~~~~~f~~~~~~~~~~~~~i~~i~~d~~g~lwi~t~-------~gl~~~~~~~~~~~ 163 (795)
T 4a2l_A 98 QGRVWIG-TR------DGLSRYDEEKDIFQNFFYEKNGKHLQVNGIEEISPEQLLISTP-------EGLIMFDIKESKFI 163 (795)
T ss_dssp TSCEEEE-ES------SCEEEEETTTTEEEEECCEETTEECCCCEEEEEETTEEEEEET-------TEEEEEETTTTEEE
T ss_pred CCCEEEE-eC------CchheeCCCCCeEEeccccccCCCceEEEEEECCCCCEEEEEC-------CceEEEECCCCEEE
Confidence 5677764 32 2389999999988776432111 10 12232 33788888542 46899999999887
Q ss_pred Eccc-ccCcccceEEE-EECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEE-ECCEEEEEecCCCC
Q 007704 434 RTRS-MLQKRFALAAA-ELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAV-LNGKLYALGGFDGS 510 (592)
Q Consensus 434 ~i~~-~p~~R~~~~a~-~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~-~~~~Lyv~GG~~~~ 510 (592)
.... .+....-.++. ..++.|||.. . ...+++||+.++.+..+...+......+++. -++.|+|...
T Consensus 164 ~~~~~~~~~~~i~~i~~d~~g~lwigt--~----~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~---- 233 (795)
T 4a2l_A 164 DDSFSTAMHKTIASTLYRQGDQIYIGT--S----TDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATE---- 233 (795)
T ss_dssp CSSSCHHHHTCCEEEEEEETTEEEEEE--S----SSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEB----
T ss_pred eccCCCCCCcceEEEEECCCCCEEEEE--C----CCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEEC----
Confidence 6543 11111012222 2478898832 1 1358899999999987743332222233333 3778887431
Q ss_pred CCCCeEEEEeCCCCeEEEcCCCC---C--CCc-ceEEEEE-CCEEEEEecccCCCccccEEEEEcCC-CcEEEcc
Q 007704 511 AMVPSIEVYDPRLGSWMSGEPMK---L--SRG-YLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG-QGWEEIN 577 (592)
Q Consensus 511 ~~~~~v~~yD~~t~~W~~v~~lp---~--~R~-~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~W~~v~ 577 (592)
...+++||+.+++++.....+ . +.. ..+++.- ++.|+| |-.. -+.+||+. ..+..+.
T Consensus 234 --~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-------Gl~~~~~~~~~~~~~~ 298 (795)
T 4a2l_A 234 --GAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-------DLNIYHEGTDSFASYS 298 (795)
T ss_dssp --SSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-------CEEEEETTTTEEEEEC
T ss_pred --CCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-------hhheEcCCCCeEEEEe
Confidence 124889999999888764321 1 111 2222222 466776 3322 27788877 6776653
No 121
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=94.76 E-value=2.3 Score=41.54 Aligned_cols=185 Identities=14% Similarity=0.135 Sum_probs=92.4
Q ss_pred CEEEEEeeCCCCCCcceEEEEECCCCeE---EECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeE
Q 007704 358 GELYIFGGGDGNSWHNTVESYSPANDEW---TSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKW 432 (592)
Q Consensus 358 ~~Iyv~GG~~~~~~~~~v~~yd~~t~~W---~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W 432 (592)
+++++-||.++ .+.++|+.+... .....+......-..+.+ +++.++.|+.++ .+..++......
T Consensus 51 ~~~l~S~s~D~-----~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~-----~i~~~~~~~~~~ 120 (340)
T 4aow_A 51 PDMILSASRDK-----TIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG-----TLRLWDLTTGTT 120 (340)
T ss_dssp TTEEEEEETTS-----CEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEE
T ss_pred CCEEEEEcCCC-----eEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccc-----cceEEeecccce
Confidence 56888888764 466666654321 111112211122222333 677788887653 567788877665
Q ss_pred EEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE----CCEEEEEecCC
Q 007704 433 IRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL----NGKLYALGGFD 508 (592)
Q Consensus 433 ~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~----~~~Lyv~GG~~ 508 (592)
...................+..++.|+.+ ..+.+||.....-........... ...+.+ .+.+++.|+.+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~l~s~s~d-----~~~~~~d~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~s~~~d 194 (340)
T 4aow_A 121 TRRFVGHTKDVLSVAFSSDNRQIVSGSRD-----KTIKLWNTLGVCKYTVQDESHSEW-VSCVRFSPNSSNPIIVSCGWD 194 (340)
T ss_dssp EEEEECCSSCEEEEEECTTSSCEEEEETT-----SCEEEECTTSCEEEEECSSSCSSC-EEEEEECSCSSSCEEEEEETT
T ss_pred eeeecCCCCceeEEEEeecCccceeecCC-----CeEEEEEeCCCceEEEEeccccCc-ccceEEccCCCCcEEEEEcCC
Confidence 44332222222222222245566667655 345677776554333322221111 122222 24466677755
Q ss_pred CCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 509 GSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 509 ~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+ .+.+||..+......-.- ......+++.. ++.+++.|+.++ .+.+||..
T Consensus 195 ~-----~i~i~d~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s~Dg------~i~iwd~~ 245 (340)
T 4aow_A 195 K-----LVKVWNLANCKLKTNHIG-HTGYLNTVTVSPDGSLCASGGKDG------QAMLWDLN 245 (340)
T ss_dssp S-----CEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTC------EEEEEETT
T ss_pred C-----EEEEEECCCCceeeEecC-CCCcEEEEEECCCCCEEEEEeCCC------eEEEEEec
Confidence 3 478899888765432111 11111222222 567777787643 47777764
No 122
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=94.75 E-value=1.6 Score=42.14 Aligned_cols=182 Identities=9% Similarity=0.029 Sum_probs=87.5
Q ss_pred ECCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEE-EECCEEEEEecCCCCcccceEEEEeCCCCe-EE
Q 007704 356 LNGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGA-TIDNKIFAIGGGNGLECFSDVEMLDLDIGK-WI 433 (592)
Q Consensus 356 ~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~-~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~-W~ 433 (592)
.++..++.|+.+ ..+.+||..+......-..... .-.+++ .-++++++.|+.++ .+.+||..... ..
T Consensus 27 ~~~~~l~s~~~d-----g~v~vw~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg-----~i~~~~~~~~~~~~ 95 (313)
T 3odt_A 27 VDDSKVASVSRD-----GTVRLWSKDDQWLGTVVYTGQG-FLNSVCYDSEKELLLFGGKDT-----MINGVPLFATSGED 95 (313)
T ss_dssp EETTEEEEEETT-----SEEEEEEESSSEEEEEEEECSS-CEEEEEEETTTTEEEEEETTS-----CEEEEETTCCTTSC
T ss_pred cCCCEEEEEEcC-----CcEEEEECCCCEEEEEeecCCc-cEEEEEECCCCCEEEEecCCC-----eEEEEEeeecCCCC
Confidence 466677788766 3688888877654332111111 111222 23677888887553 45666664321 11
Q ss_pred EcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCEEEEEecCCCCC
Q 007704 434 RTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGKLYALGGFDGSA 511 (592)
Q Consensus 434 ~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~Lyv~GG~~~~~ 511 (592)
.+..+............++.+++.|+.+ ..+.+||.....+.... . .....++... ++..++.|+.++
T Consensus 96 ~~~~~~~~~~~i~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~-~--~~~v~~~~~~~~~~~~l~~~~~d~-- 165 (313)
T 3odt_A 96 PLYTLIGHQGNVCSLSFQDGVVISGSWD-----KTAKVWKEGSLVYNLQA-H--NASVWDAKVVSFSENKFLTASADK-- 165 (313)
T ss_dssp C-CEECCCSSCEEEEEEETTEEEEEETT-----SEEEEEETTEEEEEEEC-C--SSCEEEEEEEETTTTEEEEEETTS--
T ss_pred cccchhhcccCEEEEEecCCEEEEEeCC-----CCEEEEcCCcEEEeccc-C--CCceeEEEEccCCCCEEEEEECCC--
Confidence 1111211112222233356666777654 45778883322222111 1 1112222222 566777777653
Q ss_pred CCCeEEEEeCCCCeEEEcCCCCCCCcceEEEE-ECCEEEEEecccCCCccccEEEEEcCC
Q 007704 512 MVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAV-VKEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 512 ~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v-~~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.+.+||..... ..+.. .......+++. -++. ++.|+.+ ..+.+||..
T Consensus 166 ---~i~i~d~~~~~-~~~~~-~~~~~i~~~~~~~~~~-~~~~~~d------g~i~i~d~~ 213 (313)
T 3odt_A 166 ---TIKLWQNDKVI-KTFSG-IHNDVVRHLAVVDDGH-FISCSND------GLIKLVDMH 213 (313)
T ss_dssp ---CEEEEETTEEE-EEECS-SCSSCEEEEEEEETTE-EEEEETT------SEEEEEETT
T ss_pred ---CEEEEecCceE-EEEec-cCcccEEEEEEcCCCe-EEEccCC------CeEEEEECC
Confidence 47788833222 22221 12222233333 3566 6666654 358888875
No 123
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=94.64 E-value=1 Score=49.62 Aligned_cols=206 Identities=10% Similarity=-0.015 Sum_probs=111.6
Q ss_pred CCEEEEEeeCCC-----CCCcceEEEEECCC------CeEEECC-CCCCCCcceEEEEECCEEEEEecCCCCc---ccce
Q 007704 357 NGELYIFGGGDG-----NSWHNTVESYSPAN------DEWTSRP-SLNGTKGSLAGATIDNKIFAIGGGNGLE---CFSD 421 (592)
Q Consensus 357 ~~~Iyv~GG~~~-----~~~~~~v~~yd~~t------~~W~~l~-~lp~~r~~~~~~~~~~~Iyv~GG~~~~~---~~~~ 421 (592)
+++.++++..+. .....+++.+|..+ .....+. .-. ........+-+|+.+++...+... ...+
T Consensus 140 Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~ 218 (662)
T 3azo_A 140 ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAH-RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTE 218 (662)
T ss_dssp TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCS-SEECCCEECTTSSEEEEEEECTTCCTTTCEE
T ss_pred CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCC-CcccCceECCCCCEEEEEECCCCCCCCCCcE
Confidence 565555554321 12346899999988 6766664 221 111112223367655554432211 1358
Q ss_pred EEEEeCC-CC---eEEEcccccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCC----c--
Q 007704 422 VEMLDLD-IG---KWIRTRSMLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRR----G-- 490 (592)
Q Consensus 422 v~~yD~~-t~---~W~~i~~~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R----~-- 490 (592)
++++|.. ++ +.+.+..-. .......+.. +|++|+.+..++ ...++++|+.++.|..+....... .
T Consensus 219 i~~~d~~~~g~~~~~~~l~~~~-~~~~~~~~~spdg~l~~~~~~~~---~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~ 294 (662)
T 3azo_A 219 LKTARVTEDGRFADTRTLLGGP-EEAIAQAEWAPDGSLIVATDRTG---WWNLHRVDPATGAATQLCRREEEFAGPLWTP 294 (662)
T ss_dssp EEEEEECTTSCEEEEEEEEEET-TBCEEEEEECTTSCEEEEECTTS---SCEEEEECTTTCCEEESSCCSSBSSCCCCST
T ss_pred EEEEEECCCCcccccEEeCCCC-CceEcceEECCCCeEEEEECCCC---CeEEEEEECCCCceeecccccccccCccccc
Confidence 9999998 57 343332211 1111222222 677777665442 247999999999998875432111 0
Q ss_pred -eeEEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEE-EEECCEEEEEecccCCCccccEEEEE
Q 007704 491 -CHSLAVL-NGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGA-AVVKEAIYVIGGVKNGSEIVDTVERF 567 (592)
Q Consensus 491 -~~s~v~~-~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~-~v~~~~Iyv~GG~~~~~~~~~~v~~Y 567 (592)
...++.. ++++++.+.. ....++.+|..+...+.+... ......+ ..-++.+++..+..+ ....+|.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~----~~~~l~~~d~~~~~~~~l~~~--~~~~~~~~s~~~~~~~~~~~~~~---~~~~i~~~ 365 (662)
T 3azo_A 295 GMRWFAPLANGLIAVVHGK----GAAVLGILDPESGELVDAAGP--WTEWAATLTVSGTRAVGVAASPR---TAYEVVEL 365 (662)
T ss_dssp TCCSEEECTTSCEEEEEBS----SSCEEEEEETTTTEEEECCSS--CCEEEEEEEEETTEEEEEEEETT---EEEEEEEE
T ss_pred cCceEeEeCCCEEEEEEEc----CccEEEEEECCCCcEEEecCC--CCeEEEEEecCCCEEEEEEcCCC---CCCEEEEE
Confidence 1123333 6777777654 245789999988887776432 1122233 334566666554322 23568888
Q ss_pred cCC-CcEEEc
Q 007704 568 KEG-QGWEEI 576 (592)
Q Consensus 568 d~~-~~W~~v 576 (592)
|+. .....+
T Consensus 366 d~~~g~~~~l 375 (662)
T 3azo_A 366 DTVTGRARTI 375 (662)
T ss_dssp ETTTCCEEEE
T ss_pred ECCCCceEEe
Confidence 876 666555
No 124
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.61 E-value=2.6 Score=42.28 Aligned_cols=202 Identities=7% Similarity=-0.036 Sum_probs=100.0
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcce-EEEEECCEEEEEecCCCCcccceEEEEeCCCCeEEEc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSL-AGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRT 435 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~-~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i 435 (592)
+++.+++....+. ...+|.+|..+.+...+..... .... ...+-+++.+++.... ..++++|+.+++-+.+
T Consensus 46 dG~~l~~~~~~~g--~~~l~~~d~~~~~~~~l~~~~~-~~~~~~~~spdg~~l~~~~~~-----~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 46 DGKKLLFAGDFDG--NRNYYLLNLETQQAVQLTEGKG-DNTFGGFISTDERAFFYVKNE-----LNLMKVDLETLEEQVI 117 (396)
T ss_dssp TSCEEEEEECTTS--SCEEEEEETTTTEEEECCCSSC-BCTTTCEECTTSSEEEEEETT-----TEEEEEETTTCCEEEE
T ss_pred CCCEEEEEEecCC--CceEEEEECCCCcEEEeecCCC-CccccceECCCCCEEEEEEcC-----CcEEEEECCCCCcEEE
Confidence 4554444443211 2468999999998877744332 2121 2223466555554432 2689999988776555
Q ss_pred ccccCcccceEEEEECCEEEEEec-------------cC--CC----------CCCCeeEEEeCCCCeEEEeccCCCCCc
Q 007704 436 RSMLQKRFALAAAELNGVLYATGG-------------YD--GN----------EYMNSAERFDPREHYWTKIANMNRRRG 490 (592)
Q Consensus 436 ~~~p~~R~~~~a~~~~g~IYV~GG-------------~~--~~----------~~~~~v~~yD~~t~~W~~i~~~p~~R~ 490 (592)
...+... ..+++.+++.. .. +. .....++++|+.++....+...+ ..
T Consensus 118 ~~~~~~~------~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~--~~ 189 (396)
T 3c5m_A 118 YTVDEEW------KGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDT--AW 189 (396)
T ss_dssp EECCTTE------EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEES--SC
T ss_pred Eeccccc------CCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCC--cc
Confidence 4333220 11112122110 00 00 12357899999998877665321 11
Q ss_pred eeEEEEE--CCE-EEEEecCCCC-CCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecccCCCccccEE
Q 007704 491 CHSLAVL--NGK-LYALGGFDGS-AMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV--KEAIYVIGGVKNGSEIVDTV 564 (592)
Q Consensus 491 ~~s~v~~--~~~-Lyv~GG~~~~-~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v 564 (592)
....... ++. |+.... +.. .....++.+|.....++.+.. ..+........+ +++.+++.+.... .....+
T Consensus 190 ~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~~l 266 (396)
T 3c5m_A 190 LGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMAYVSYFKG-QTDRVI 266 (396)
T ss_dssp EEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEEEEEEETT-TCCEEE
T ss_pred cccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEeec-cCCCccccceEECCCCCEEEEEecCCC-CccceE
Confidence 1222222 344 444432 111 122579999998888777754 221212222233 4554444433222 112349
Q ss_pred EEEcCC-CcEEEcc
Q 007704 565 ERFKEG-QGWEEIN 577 (592)
Q Consensus 565 ~~Yd~~-~~W~~v~ 577 (592)
++||+. .....+.
T Consensus 267 ~~~d~~~g~~~~l~ 280 (396)
T 3c5m_A 267 YKANPETLENEEVM 280 (396)
T ss_dssp EEECTTTCCEEEEE
T ss_pred EEEECCCCCeEEee
Confidence 999987 5555443
No 125
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=94.52 E-value=2.4 Score=44.18 Aligned_cols=149 Identities=13% Similarity=0.063 Sum_probs=76.4
Q ss_pred CCE-EEEEeeCCCCCCcceEEEEECC--CCeEEE-CCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCC
Q 007704 357 NGE-LYIFGGGDGNSWHNTVESYSPA--NDEWTS-RPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIG 430 (592)
Q Consensus 357 ~~~-Iyv~GG~~~~~~~~~v~~yd~~--t~~W~~-l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~ 430 (592)
+++ |++.|+.+ ..+..||.. +..... +.....+.. ..++.+ +++.+++|+.+ ..++.++..+.
T Consensus 113 d~~~l~~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~-v~~~~~sp~~~~l~~~~~~-----g~v~~~~~~~~ 181 (450)
T 2vdu_B 113 DESRLIACADSD-----KSLLVFDVDKTSKNVLKLRKRFCFSKR-PNAISIAEDDTTVIIADKF-----GDVYSIDINSI 181 (450)
T ss_dssp TSSEEEEEEGGG-----TEEEEEEECSSSSSCEEEEEEEECSSC-EEEEEECTTSSEEEEEETT-----SEEEEEETTSC
T ss_pred CCCEEEEEECCC-----CeEEEEECcCCCCceeeeeecccCCCC-ceEEEEcCCCCEEEEEeCC-----CcEEEEecCCc
Confidence 444 45777755 357778876 443322 111011111 122222 66777777643 46788888665
Q ss_pred eEEE--cccccC-cccceEEE-EEC---CEEEEEeccCCCCCCCeeEEEeCCCCeEEEe-ccCCCCCceeEEEEECCEEE
Q 007704 431 KWIR--TRSMLQ-KRFALAAA-ELN---GVLYATGGYDGNEYMNSAERFDPREHYWTKI-ANMNRRRGCHSLAVLNGKLY 502 (592)
Q Consensus 431 ~W~~--i~~~p~-~R~~~~a~-~~~---g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i-~~~p~~R~~~s~v~~~~~Ly 502 (592)
.... ...+.. ...-.+++ .-+ +.+++.|+.+ ..+.+||+.+...... ..-......+.... ++.++
T Consensus 182 ~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l 255 (450)
T 2vdu_B 182 PEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-----EHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLL 255 (450)
T ss_dssp CCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-----SCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEE
T ss_pred ccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC-----CcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEE
Confidence 4321 111111 11112222 235 7788888765 4678888877653322 11111111122222 78788
Q ss_pred EEecCCCCCCCCeEEEEeCCCCeEE
Q 007704 503 ALGGFDGSAMVPSIEVYDPRLGSWM 527 (592)
Q Consensus 503 v~GG~~~~~~~~~v~~yD~~t~~W~ 527 (592)
+.|+.+ ..+.+||..+....
T Consensus 256 ~s~~~d-----~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 256 LSAGGD-----DKIFAWDWKTGKNL 275 (450)
T ss_dssp EEEESS-----SEEEEEETTTCCEE
T ss_pred EEEeCC-----CeEEEEECCCCcEe
Confidence 888855 36889999887643
No 126
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=94.49 E-value=0.18 Score=52.91 Aligned_cols=185 Identities=11% Similarity=0.039 Sum_probs=94.3
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcc-eEEEE--ECCEEEEEecCCCCcccceEEEEeCCCCeEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGS-LAGAT--IDNKIFAIGGGNGLECFSDVEMLDLDIGKWI 433 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~-~~~~~--~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~ 433 (592)
++.+++.|+.++ .|..||..+.....+-.+...... .+++. .++.+++.|+.++ .+-++|..++...
T Consensus 131 ~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~-----~v~iwd~~~~~~~ 200 (435)
T 4e54_B 131 HPSTVAVGSKGG-----DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG-----TTRLQDFKGNILR 200 (435)
T ss_dssp CTTCEEEEETTS-----CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS-----CEEEEETTSCEEE
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC-----EEEEeeccCCcee
Confidence 566888888774 578888877654332222211222 22332 2567777777653 5778899887665
Q ss_pred EcccccCcc-cceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE---CCEEEEEecCC
Q 007704 434 RTRSMLQKR-FALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL---NGKLYALGGFD 508 (592)
Q Consensus 434 ~i~~~p~~R-~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~---~~~Lyv~GG~~ 508 (592)
......... ...++... ++.+++.|+.+ ..+.+||+.... +..+......-..+.+ +..+++.|+.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d-----g~i~~wd~~~~~---~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSASSRMVVTGDNV-----GNVILLNMDGKE---LWNLRMHKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp EEECCSSCSCCCCCEEEETTTTEEEEECSS-----SBEEEEESSSCB---CCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred EEeccCCCCccEEEEEECCCCCEEEEEeCC-----CcEeeeccCcce---eEEEecccceEEeeeecCCCceEEEEecCc
Confidence 543222111 12222222 66777888765 357888876543 2222111112223333 34577778765
Q ss_pred CCCCCCeEEEEeCCCCeEEE-c-CCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 509 GSAMVPSIEVYDPRLGSWMS-G-EPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 509 ~~~~~~~v~~yD~~t~~W~~-v-~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+ .+.+||..+..-.. + ....+...-.+++.. ++..++.|+.++ .|.+||..
T Consensus 273 ~-----~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~------~i~iwd~~ 326 (435)
T 4e54_B 273 Q-----TVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKS------EIRVYSAS 326 (435)
T ss_dssp S-----BCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSS------CEEEEESS
T ss_pred c-----eeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCC------EEEEEECC
Confidence 4 35678876543111 0 011111111111111 566677777653 37777764
No 127
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=94.47 E-value=1.6 Score=46.85 Aligned_cols=171 Identities=19% Similarity=0.230 Sum_probs=97.9
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCe--E-EEC----CCCCCCCcceEEEE------ECCEEEEEecCCCCcccceEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDE--W-TSR----PSLNGTKGSLAGAT------IDNKIFAIGGGNGLECFSDVE 423 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~--W-~~l----~~lp~~r~~~~~~~------~~~~Iyv~GG~~~~~~~~~v~ 423 (592)
++++|+|-| +.+|+|+-..-. + +.+ +.+|. .-. ++.. .++++|+|-| +..|
T Consensus 107 ~g~~yfFkG-------~~yW~~~~~~~~~GYPk~I~~~fpGlp~-~ID-AA~~~~~~~~~~~~~yfFkG-------~~yw 170 (460)
T 1qhu_A 107 HTSVYLIKG-------DKVWVYTSEKNEKVYPKSLQDEFPGIPF-PLD-AAVECHRGECQDEGILFFQG-------NRKW 170 (460)
T ss_dssp TTEEEEEET-------TEEEEECC-------CEEHHHHSTTCCS-SCC-EEEEECBBTBSSSEEEEEET-------TEEE
T ss_pred CCcEEEEec-------cEEEEEeCCcccCCCCeEhhhccCCCCC-Cee-EEEECCccCCCCCeEEEEec-------ccEE
Confidence 599999988 678888743210 0 111 22332 122 2222 2688999987 5789
Q ss_pred EEeCCCCeEEEc--ccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCe------------EEEeccCC---
Q 007704 424 MLDLDIGKWIRT--RSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHY------------WTKIANMN--- 486 (592)
Q Consensus 424 ~yD~~t~~W~~i--~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~------------W~~i~~~p--- 486 (592)
.||..+++.... +.++ . .-++....+++|+|-| +..++||..+.+ |..++...
T Consensus 171 ~yd~~~~~~~~~~w~gi~--~-iDAA~~~~g~~YfFkG-------~~y~rfd~~~~~v~~gyPk~is~~w~~c~~~g~~~ 240 (460)
T 1qhu_A 171 FWDLTTGTKKERSWPAVG--N-CTSALRWLGRYYCFQG-------NQFLRFNPVSGEVPPGYPLDVRDYFLSCPGRGHRS 240 (460)
T ss_dssp EEETTTTEEEEECCTTSC--C-CSEEEEETTEEEEEET-------TEEEEECTTTCCCCTTCCEEHHHHTSCCTTCCSCC
T ss_pred EEecccceeecccCCCCC--c-cchheeeCCceEEEEC-------CEEEEEcCccCcccCCCCcchhhcccCCCCCCCcc
Confidence 999988866532 2232 2 3455566899999988 567888876543 21111100
Q ss_pred ---------------C-CCceeEEEE-ECCEEEEEecCCCCCCCCeEEEEeCCCCeEE--Ec----CCCCCCCcceEEEE
Q 007704 487 ---------------R-RRGCHSLAV-LNGKLYALGGFDGSAMVPSIEVYDPRLGSWM--SG----EPMKLSRGYLGAAV 543 (592)
Q Consensus 487 ---------------~-~R~~~s~v~-~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~--~v----~~lp~~R~~~s~~v 543 (592)
. ....-+++. .++++|+|-| +..|++|...+.+. .+ +.+|.. --++..
T Consensus 241 ~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg-------~~yWR~~~~~~~~~p~~Is~~WpglP~~--IDAAf~ 311 (460)
T 1qhu_A 241 SHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQWPQGPST--VDAAFS 311 (460)
T ss_dssp -------CCCTTTTTCTTCCCCEEEECTTCCEEEEET-------TEEEECTTGGGCCCCEEGGGTCTTSCSS--CSEEEE
T ss_pred ccccCCccccccccccCCCCcCEEEecCCCeEEEEeC-------CEEEEEecCCCCcCccchhhhccCCCCC--CcEEEE
Confidence 0 112233444 3789999977 35777776543221 12 123332 234444
Q ss_pred ECCEEEEEecccCCCccccEEEEEcCC
Q 007704 544 VKEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 544 ~~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.++++|+|=| +.+|+|+..
T Consensus 312 ~~~~~yfFkG--------~~yw~f~~~ 330 (460)
T 1qhu_A 312 WEDKLYLIQD--------TKVYVFLTK 330 (460)
T ss_dssp ETTEEEEEET--------TEEEEEECS
T ss_pred ECCeEEEEeC--------CEEEEEeCC
Confidence 5889999977 458888854
No 128
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.47 E-value=2.6 Score=47.74 Aligned_cols=184 Identities=11% Similarity=0.082 Sum_probs=105.8
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCC-CcceEEEEE-CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGT-KGSLAGATI-DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~-r~~~~~~~~-~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
++.|++ |... .-+++||+.+++++.......+ ..-.+++.. ++.||+... .-+++||+.+++|+.
T Consensus 417 ~g~lWi-gt~~-----~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~ 483 (781)
T 3v9f_A 417 EGNLWF-GTYL-----GNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-------AGVFVIDLASKKVIH 483 (781)
T ss_dssp TSCEEE-EETT-----EEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-------TEEEEEESSSSSCCE
T ss_pred CCCEEE-Eecc-----CCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-------CceEEEeCCCCeEEe
Confidence 567777 4322 3489999999999887532111 122233333 577777431 468999999998876
Q ss_pred cccccC----cccceEEEE-ECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEecc---CCCCCceeEEEEE-CCEEEEEe
Q 007704 435 TRSMLQ----KRFALAAAE-LNGVLYATGGYDGNEYMNSAERFDPREHYWTKIAN---MNRRRGCHSLAVL-NGKLYALG 505 (592)
Q Consensus 435 i~~~p~----~R~~~~a~~-~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~---~p~~R~~~s~v~~-~~~Lyv~G 505 (592)
...... ...-.+++. .++.|++... ...+++||+.++.|+.... ++... ..+++.- ++.|++-.
T Consensus 484 ~~~~~~~~~~~~~i~~i~~d~~g~lWigt~------~~Gl~~~~~~~~~~~~~~~~~~l~~~~-i~~i~~d~~g~lWi~T 556 (781)
T 3v9f_A 484 HYDTSNSQLLENFVRSIAQDSEGRFWIGTF------GGGVGIYTPDMQLVRKFNQYEGFCSNT-INQIYRSSKGQMWLAT 556 (781)
T ss_dssp EECTTTSSCSCSCEEEEEECTTCCEEEEES------SSCEEEECTTCCEEEEECTTTTCSCSC-EEEEEECTTSCEEEEE
T ss_pred cccCcccccccceeEEEEEcCCCCEEEEEc------CCCEEEEeCCCCeEEEccCCCCCCCCe-eEEEEECCCCCEEEEE
Confidence 543220 111112222 2567777431 1358899999999988753 22221 2222222 67777753
Q ss_pred cCCCCCCCCeE-EEEeCCCCeEEEcC---CCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC-CcEEEc
Q 007704 506 GFDGSAMVPSI-EVYDPRLGSWMSGE---PMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG-QGWEEI 576 (592)
Q Consensus 506 G~~~~~~~~~v-~~yD~~t~~W~~v~---~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~W~~v 576 (592)
. ..+ .+||+.+++++... .+|.... .+++.- ++.|++.+ . +-+.+||++ .++...
T Consensus 557 ~-------~Glv~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t-~-------~Gl~~~~~~~~~~~~~ 617 (781)
T 3v9f_A 557 G-------EGLVCFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWAST-N-------TGISCYITSKKCFYTY 617 (781)
T ss_dssp T-------TEEEEESCTTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEEC-S-------SCEEEEETTTTEEEEE
T ss_pred C-------CCceEEECCCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEc-C-------CceEEEECCCCceEEe
Confidence 2 246 89999988887754 3443332 233332 56777754 2 227888887 666554
No 129
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=94.47 E-value=1.3 Score=43.39 Aligned_cols=185 Identities=12% Similarity=0.111 Sum_probs=92.8
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeEEEcc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTR 436 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~ 436 (592)
++.+++.|+.++ .+..++........................++..++.|+.++ .+.++|.....-....
T Consensus 97 dg~~l~s~~~d~-----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~-----~~~~~d~~~~~~~~~~ 166 (340)
T 4aow_A 97 DGQFALSGSWDG-----TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK-----TIKLWNTLGVCKYTVQ 166 (340)
T ss_dssp TSSEEEEEETTS-----EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTS-----CEEEECTTSCEEEEEC
T ss_pred CCCEEEEEcccc-----cceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCC-----eEEEEEeCCCceEEEE
Confidence 677788888663 567788777765444322222222222223566667776543 4567777654322221
Q ss_pred cccCcccceEEEEE---CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCEEEEEecCCCCCC
Q 007704 437 SMLQKRFALAAAEL---NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGKLYALGGFDGSAM 512 (592)
Q Consensus 437 ~~p~~R~~~~a~~~---~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~~~~~ 512 (592)
...........+.. .+.+++.||.+ ..+.+||+.+......-... ...-.+++.. ++.+++.|+.++
T Consensus 167 ~~~~~~~v~~~~~~~~~~~~~~~s~~~d-----~~i~i~d~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~s~Dg--- 237 (340)
T 4aow_A 167 DESHSEWVSCVRFSPNSSNPIIVSCGWD-----KLVKVWNLANCKLKTNHIGH-TGYLNTVTVSPDGSLCASGGKDG--- 237 (340)
T ss_dssp SSSCSSCEEEEEECSCSSSCEEEEEETT-----SCEEEEETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTC---
T ss_pred eccccCcccceEEccCCCCcEEEEEcCC-----CEEEEEECCCCceeeEecCC-CCcEEEEEECCCCCEEEEEeCCC---
Confidence 11111111111111 23456666654 35788998887654332111 1111222222 677888888664
Q ss_pred CCeEEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEEEEEcCC
Q 007704 513 VPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 513 ~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.+.+||..+..-... +.......+++...+..++.|+.+ ..|.+||..
T Consensus 238 --~i~iwd~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~d------~~i~iwd~~ 285 (340)
T 4aow_A 238 --QAMLWDLNEGKHLYT--LDGGDIINALCFSPNRYWLCAATG------PSIKIWDLE 285 (340)
T ss_dssp --EEEEEETTTTEEEEE--EECSSCEEEEEECSSSSEEEEEET------TEEEEEETT
T ss_pred --eEEEEEeccCceeee--ecCCceEEeeecCCCCceeeccCC------CEEEEEECC
Confidence 578889877643321 111222223333344445556643 347777765
No 130
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=94.41 E-value=0.95 Score=44.67 Aligned_cols=154 Identities=20% Similarity=0.213 Sum_probs=79.3
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEE-ECC-EEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGAT-IDN-KIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~-~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
++.+|+.++.+ +.++++|+.+++....-..+.....+.++. -++ .+|+.++. ...+++||+.+++...
T Consensus 10 ~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~-----~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 10 GHEYMIVTNYP-----NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH-----YGDIYGIDLDTCKNTF 79 (349)
T ss_dssp TCEEEEEEETT-----TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT-----TTEEEEEETTTTEEEE
T ss_pred CCEEEEEeCCC-----CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC-----CCcEEEEeCCCCcEEE
Confidence 67888888754 579999999887644322222101223333 245 47777642 2579999999887553
Q ss_pred cccccC-----cccceEEEEE-CC-EEEEEecc---CCCCC---CCeeEEEeCCCCeEEE-eccCCCCCceeEEEEE-CC
Q 007704 435 TRSMLQ-----KRFALAAAEL-NG-VLYATGGY---DGNEY---MNSAERFDPREHYWTK-IANMNRRRGCHSLAVL-NG 499 (592)
Q Consensus 435 i~~~p~-----~R~~~~a~~~-~g-~IYV~GG~---~~~~~---~~~v~~yD~~t~~W~~-i~~~p~~R~~~s~v~~-~~ 499 (592)
.-..+. ...-..++.. ++ .+|+.+.. ....+ ...+.+||+.++.-.. +.....++...+++.. ++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg 159 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 159 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTS
T ss_pred EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCC
Confidence 222211 1111222332 44 56655421 00001 2578999988743111 1111122222223322 66
Q ss_pred EEEEEecCCCCCCCCeEEEEeCCCCeEEE
Q 007704 500 KLYALGGFDGSAMVPSIEVYDPRLGSWMS 528 (592)
Q Consensus 500 ~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~ 528 (592)
++|+.++ +++++|+.+.+...
T Consensus 160 ~l~~~~~--------~i~~~d~~~~~~~~ 180 (349)
T 1jmx_B 160 SLYVAGP--------DIYKMDVKTGKYTV 180 (349)
T ss_dssp CEEEESS--------SEEEECTTTCCEEE
T ss_pred cEEEccC--------cEEEEeCCCCceec
Confidence 6777432 38889988766443
No 131
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=94.38 E-value=5.9 Score=44.22 Aligned_cols=194 Identities=11% Similarity=0.047 Sum_probs=101.9
Q ss_pred cceEEEEECCCCeEE--ECCCCC-CCCcceEE-EEECCEEEEEecCCCCcccceEEEEeCCC------C--eEEEccccc
Q 007704 372 HNTVESYSPANDEWT--SRPSLN-GTKGSLAG-ATIDNKIFAIGGGNGLECFSDVEMLDLDI------G--KWIRTRSML 439 (592)
Q Consensus 372 ~~~v~~yd~~t~~W~--~l~~lp-~~r~~~~~-~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t------~--~W~~i~~~p 439 (592)
...++.++..+.... .+-..+ .+...... .+-+++.++++...+....++++++|..+ . .++.+..-.
T Consensus 207 ~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~ 286 (710)
T 2xdw_A 207 HQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNF 286 (710)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSS
T ss_pred CCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCC
Confidence 345888888776521 111111 12222222 23366654554432222257899999876 4 577764322
Q ss_pred CcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCC---eEEEeccCCCCCceeEEEEE-CCEEEEEecCCCCCCCCe
Q 007704 440 QKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREH---YWTKIANMNRRRGCHSLAVL-NGKLYALGGFDGSAMVPS 515 (592)
Q Consensus 440 ~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~---~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~~~~~~~~ 515 (592)
.... .....-++.||+.+..+. ....++++|+.+. .|+.+.+-........+... ++.+++....++ ...
T Consensus 287 ~~~~-~~~s~dg~~l~~~s~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g---~~~ 360 (710)
T 2xdw_A 287 EGEY-DYVTNEGTVFTFKTNRHS--PNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV---KNT 360 (710)
T ss_dssp SSCE-EEEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETT---EEE
T ss_pred CcEE-EEEeccCCEEEEEECCCC--CCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECC---EEE
Confidence 2221 222334778888875432 2357899999876 48877543222223334445 778887765443 346
Q ss_pred EEEEeCCCCe-EEEcCCCCCCCcceEEEEE--CC-EEEEE-ecccCCCccccEEEEEcCC-Cc--EEEccc
Q 007704 516 IEVYDPRLGS-WMSGEPMKLSRGYLGAAVV--KE-AIYVI-GGVKNGSEIVDTVERFKEG-QG--WEEINS 578 (592)
Q Consensus 516 v~~yD~~t~~-W~~v~~lp~~R~~~s~~v~--~~-~Iyv~-GG~~~~~~~~~~v~~Yd~~-~~--W~~v~~ 578 (592)
++++|+.++. .+.+. .+ ......... ++ .+++. .+.... .+++.||.. .. +..+..
T Consensus 361 l~~~~~~~g~~~~~l~-~~--~~~v~~~~~s~d~~~l~~~~ss~~~P----~~i~~~d~~tg~~~~~~l~~ 424 (710)
T 2xdw_A 361 LQLHDLATGALLKIFP-LE--VGSVVGYSGQKKDTEIFYQFTSFLSP----GIIYHCDLTKEELEPRVFRE 424 (710)
T ss_dssp EEEEETTTCCEEEEEC-CC--SSEEEEEECCTTCSEEEEEEECSSCC----CEEEEEETTSSSCCCEEEEE
T ss_pred EEEEECCCCCEEEecC-CC--CceEEEEecCCCCCEEEEEEeCCCCC----CEEEEEECCCCccceEEeee
Confidence 8999986554 44443 22 222222222 33 44433 333222 679999987 55 555433
No 132
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.36 E-value=0.87 Score=51.77 Aligned_cols=177 Identities=11% Similarity=0.073 Sum_probs=101.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCC---C-CCcceEEEEE-CCEEEEEecCCCCcccceEEEEeCCCCe
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLN---G-TKGSLAGATI-DNKIFAIGGGNGLECFSDVEMLDLDIGK 431 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp---~-~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~v~~yD~~t~~ 431 (592)
++.|++-.. +-+++||+.+++|......+ . ...-.+++.. ++.|||.... .-+++||+.+++
T Consensus 460 ~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~------~Gl~~~~~~~~~ 526 (781)
T 3v9f_A 460 NKKIWIGTH-------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFG------GGVGIYTPDMQL 526 (781)
T ss_dssp TSEEEEEET-------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESS------SCEEEECTTCCE
T ss_pred CCCEEEEEC-------CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcC------CCEEEEeCCCCe
Confidence 567776432 34899999998886653322 1 1111222222 5778775321 348899999999
Q ss_pred EEEccc---ccCcccceEEEE-ECCEEEEEeccCCCCCCCee-EEEeCCCCeEEEecc---CCCCCceeEEEEE-CCEEE
Q 007704 432 WIRTRS---MLQKRFALAAAE-LNGVLYATGGYDGNEYMNSA-ERFDPREHYWTKIAN---MNRRRGCHSLAVL-NGKLY 502 (592)
Q Consensus 432 W~~i~~---~p~~R~~~~a~~-~~g~IYV~GG~~~~~~~~~v-~~yD~~t~~W~~i~~---~p~~R~~~s~v~~-~~~Ly 502 (592)
|+.... ++.... .+.+. .++.|++... ..+ .+||+.++.+..... ++.... .+++.- +|.|+
T Consensus 527 ~~~~~~~~~l~~~~i-~~i~~d~~g~lWi~T~-------~Glv~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW 597 (781)
T 3v9f_A 527 VRKFNQYEGFCSNTI-NQIYRSSKGQMWLATG-------EGLVCFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIW 597 (781)
T ss_dssp EEEECTTTTCSCSCE-EEEEECTTSCEEEEET-------TEEEEESCTTTCCCEEECGGGTCSCCCC-CEEEECSSSCEE
T ss_pred EEEccCCCCCCCCee-EEEEECCCCCEEEEEC-------CCceEEECCCCCcEEEccccCCCCCceE-EEEEECCCCCEE
Confidence 887642 221111 12222 2577877532 356 899999988877632 333322 344433 67788
Q ss_pred EEecCCCCCCCCeEEEEeCCCCeEEEcC---CCCCCCcce-EEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 503 ALGGFDGSAMVPSIEVYDPRLGSWMSGE---PMKLSRGYL-GAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 503 v~GG~~~~~~~~~v~~yD~~t~~W~~v~---~lp~~R~~~-s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+.+. +.+.+||+.+.+++... .++...... +++.. ++.|| |||.++ +.+|||.
T Consensus 598 ~~t~-------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~-~g~~~G-------l~~f~p~ 655 (781)
T 3v9f_A 598 ASTN-------TGISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIY-FGSING-------LCFFNPD 655 (781)
T ss_dssp EECS-------SCEEEEETTTTEEEEECGGGTCCSSCEEEEEEEECTTSCEE-EEETTE-------EEEECSC
T ss_pred EEcC-------CceEEEECCCCceEEecccCCccccccccCceEECCCCEEE-EECCCc-------eEEEChh
Confidence 7642 34889999999988764 344433322 33333 45555 477543 6667764
No 133
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=94.31 E-value=1.6 Score=45.09 Aligned_cols=135 Identities=16% Similarity=0.255 Sum_probs=73.6
Q ss_pred ceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEE
Q 007704 373 NTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAEL 450 (592)
Q Consensus 373 ~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~ 450 (592)
+.|+.+|..+++...+-.+......-.++.+ +++.++.|+.+ ..+.+||..+++-... +........+...
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D-----g~v~iWd~~~~~~~~~--~~~h~~~v~~~s~ 197 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQKRLRN--MTSHSARVGSLSW 197 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC-----CeEEEEEcCCCcEEEE--EeCCCCceEEEee
Confidence 4689999999887665444333323333333 67888888865 3688999988764332 2211122233445
Q ss_pred CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCC
Q 007704 451 NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGKLYALGGFDGSAMVPSIEVYDPRLG 524 (592)
Q Consensus 451 ~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~~~~~~~~v~~yD~~t~ 524 (592)
++.+.+.|+.+ ..+..+|..........-.........+... ++..++.|+.++ .+.++|..+.
T Consensus 198 ~~~~l~sgs~d-----~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~-----~v~i~~~~~~ 262 (420)
T 4gga_A 198 NSYILSSGSRS-----GHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN-----LVNVWPSAPG 262 (420)
T ss_dssp ETTEEEEEETT-----SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEESSCC
T ss_pred CCCEEEEEeCC-----CceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccc-----cceEEeeccc
Confidence 67777777765 3566777665432211100111111112222 566777777553 4666776543
No 134
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.30 E-value=0.9 Score=45.93 Aligned_cols=188 Identities=12% Similarity=0.058 Sum_probs=95.0
Q ss_pred EEEEEeeCCCCCCcceEEEEECCCCe------EEECCCCCCC---CcceEEEE-----ECCEE-EEEecCCCCcccceEE
Q 007704 359 ELYIFGGGDGNSWHNTVESYSPANDE------WTSRPSLNGT---KGSLAGAT-----IDNKI-FAIGGGNGLECFSDVE 423 (592)
Q Consensus 359 ~Iyv~GG~~~~~~~~~v~~yd~~t~~------W~~l~~lp~~---r~~~~~~~-----~~~~I-yv~GG~~~~~~~~~v~ 423 (592)
.+++.|+.++ .+..||..+.. +..+...+.. ..-.+++. -++.. ++.|+.+ ..+.
T Consensus 82 ~~l~s~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-----g~i~ 151 (397)
T 1sq9_A 82 CLVATTSFSG-----DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-----GTTY 151 (397)
T ss_dssp EEEEEEETTS-----CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-----SCEE
T ss_pred cEEEEEcCCC-----CEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-----CcEE
Confidence 8888888663 57788877766 6666544311 11222222 34666 7777754 3567
Q ss_pred EEeCCC------Ce---EEEcccc--------cCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccC
Q 007704 424 MLDLDI------GK---WIRTRSM--------LQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANM 485 (592)
Q Consensus 424 ~yD~~t------~~---W~~i~~~--------p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~ 485 (592)
+||..+ .+ |.....+ .....-.+++.. ++ +++.|+.+ ..+.+||+.+..-...-..
T Consensus 152 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-----g~i~i~d~~~~~~~~~~~~ 225 (397)
T 1sq9_A 152 IWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN-----GTVQISELSTLRPLYNFES 225 (397)
T ss_dssp EEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-----SEEEEEETTTTEEEEEEEC
T ss_pred EEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC-----CcEEEEECCCCceeEEEec
Confidence 777765 21 1111011 011112223333 45 66777654 4688999988764332211
Q ss_pred -C-C---CCceeEEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCeEEE-cCCCC-----------CCCcceEEEEE-CC
Q 007704 486 -N-R---RRGCHSLAVL-NGKLYALGGFDGSAMVPSIEVYDPRLGSWMS-GEPMK-----------LSRGYLGAAVV-KE 546 (592)
Q Consensus 486 -p-~---~R~~~s~v~~-~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~-v~~lp-----------~~R~~~s~~v~-~~ 546 (592)
. . .....+++.. ++.+++.|+.++ ....+.+||..+..-.. +...+ ......+++.. ++
T Consensus 226 ~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~--~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 303 (397)
T 1sq9_A 226 QHSMINNSNSIRSVKFSPQGSLLAIAHDSN--SFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG 303 (397)
T ss_dssp CC---CCCCCEEEEEECSSTTEEEEEEEET--TEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSS
T ss_pred cccccccCCccceEEECCCCCEEEEEecCC--CCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCC
Confidence 0 1 2222222222 667777777541 11368899987764322 22100 11112223332 46
Q ss_pred EEEEEecccCCCccccEEEEEcCC
Q 007704 547 AIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 547 ~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
..++.|+.+ ..|.+||..
T Consensus 304 ~~l~~~~~d------g~i~iwd~~ 321 (397)
T 1sq9_A 304 ETLCSAGWD------GKLRFWDVK 321 (397)
T ss_dssp SEEEEEETT------SEEEEEETT
T ss_pred CEEEEEeCC------CeEEEEEcC
Confidence 677777754 458889975
No 135
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.27 E-value=2.4 Score=43.20 Aligned_cols=180 Identities=13% Similarity=0.103 Sum_probs=91.3
Q ss_pred ceEEEEECCCCe-E-EECCCCCCCCcceEEEEE---CCEEEEEecCCCCcccceEEEEeCCCCeEEE-----cccccC-c
Q 007704 373 NTVESYSPANDE-W-TSRPSLNGTKGSLAGATI---DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR-----TRSMLQ-K 441 (592)
Q Consensus 373 ~~v~~yd~~t~~-W-~~l~~lp~~r~~~~~~~~---~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~-----i~~~p~-~ 441 (592)
..+.+||..+.. . ..+..+......-..+.+ ++.+++.|+.+ ..+.+||..++.... +..+.. .
T Consensus 57 g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d-----g~v~vw~~~~~~~~~~~~~~~~~~~~h~ 131 (402)
T 2aq5_A 57 GAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSED-----CTVMVWEIPDGGLVLPLREPVITLEGHT 131 (402)
T ss_dssp CCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETT-----SEEEEEECCTTCCSSCBCSCSEEEECCS
T ss_pred CEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCC-----CeEEEEEccCCCCccccCCceEEecCCC
Confidence 357888875432 1 111112222222233333 67788888755 468889988764321 111111 1
Q ss_pred ccceEEEEE-CC-EEEEEeccCCCCCCCeeEEEeCCCCeEEEecc-CCCCCceeEEEEE-CCEEEEEecCCCCCCCCeEE
Q 007704 442 RFALAAAEL-NG-VLYATGGYDGNEYMNSAERFDPREHYWTKIAN-MNRRRGCHSLAVL-NGKLYALGGFDGSAMVPSIE 517 (592)
Q Consensus 442 R~~~~a~~~-~g-~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~-~p~~R~~~s~v~~-~~~Lyv~GG~~~~~~~~~v~ 517 (592)
..-.+++.. ++ .+++.|+.+ ..+.+||+.++.....-. ........+++.. ++.+++.|+.+ ..+.
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~ 201 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCD-----NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-----KRVR 201 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETT-----SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-----SEEE
T ss_pred CeEEEEEECcCCCCEEEEEcCC-----CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-----CcEE
Confidence 111222222 33 577777765 358899999886543321 1122222233333 67778888765 3689
Q ss_pred EEeCCCCeEEEcC-CCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 518 VYDPRLGSWMSGE-PMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 518 ~yD~~t~~W~~v~-~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+||+.+..-...- ..........++.. ++.+++.|..... -..|.+||..
T Consensus 202 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~---d~~i~iwd~~ 253 (402)
T 2aq5_A 202 VIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMS---ERQVALWDTK 253 (402)
T ss_dssp EEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTC---CEEEEEEETT
T ss_pred EEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCC---CceEEEEcCc
Confidence 9999887644321 11111112223332 6777777631111 1568888875
No 136
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=94.27 E-value=2.4 Score=41.73 Aligned_cols=148 Identities=15% Similarity=0.124 Sum_probs=78.9
Q ss_pred CEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEEc
Q 007704 358 GELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRT 435 (592)
Q Consensus 358 ~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i 435 (592)
+.+++.|+.++ .+..||..+........+......-..+.+ +++.++.|+.+ ..+.+||..+.+....
T Consensus 54 g~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~ 123 (368)
T 3mmy_A 54 GNFLIAGSWAN-----DVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD-----KTAKMWDLSSNQAIQI 123 (368)
T ss_dssp SEEEEEEETTS-----EEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEE
T ss_pred ceEEEEECCCC-----cEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC-----CcEEEEEcCCCCceee
Confidence 48888888763 577888776322211111111222223333 67777777754 4788999998876554
Q ss_pred ccccCcccceEEEE---ECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEECCEEEEEecCCCCCC
Q 007704 436 RSMLQKRFALAAAE---LNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVLNGKLYALGGFDGSAM 512 (592)
Q Consensus 436 ~~~p~~R~~~~a~~---~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~~~~Lyv~GG~~~~~~ 512 (592)
.... ..-.+++. -++.+++.|+.+ ..+.+||+.+..-... +.......++......+++.++ +
T Consensus 124 ~~~~--~~v~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~---- 189 (368)
T 3mmy_A 124 AQHD--APVKTIHWIKAPNYSCVMTGSWD-----KTLKFWDTRSSNPMMV--LQLPERCYCADVIYPMAVVATA-E---- 189 (368)
T ss_dssp EECS--SCEEEEEEEECSSCEEEEEEETT-----SEEEEECSSCSSCSEE--EECSSCEEEEEEETTEEEEEEG-G----
T ss_pred cccc--CceEEEEEEeCCCCCEEEEccCC-----CcEEEEECCCCcEEEE--EecCCCceEEEecCCeeEEEeC-C----
Confidence 3211 11222222 266777888765 4688899877642211 1112223334444565554433 2
Q ss_pred CCeEEEEeCCCC--eEEEcC
Q 007704 513 VPSIEVYDPRLG--SWMSGE 530 (592)
Q Consensus 513 ~~~v~~yD~~t~--~W~~v~ 530 (592)
..+.+||.... .+..+.
T Consensus 190 -~~i~~~~~~~~~~~~~~~~ 208 (368)
T 3mmy_A 190 -RGLIVYQLENQPSEFRRIE 208 (368)
T ss_dssp -GCEEEEECSSSCEEEEECC
T ss_pred -CcEEEEEeccccchhhhcc
Confidence 24777877654 344443
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=94.26 E-value=1.4 Score=43.27 Aligned_cols=190 Identities=12% Similarity=0.002 Sum_probs=92.8
Q ss_pred CC-EEEEEeeCCCCCCcceEEEEECCCCeE--EECCCCCCCCcceEEEEECC-EEEEEecCCCCcccceEEEEeCCCCeE
Q 007704 357 NG-ELYIFGGGDGNSWHNTVESYSPANDEW--TSRPSLNGTKGSLAGATIDN-KIFAIGGGNGLECFSDVEMLDLDIGKW 432 (592)
Q Consensus 357 ~~-~Iyv~GG~~~~~~~~~v~~yd~~t~~W--~~l~~lp~~r~~~~~~~~~~-~Iyv~GG~~~~~~~~~v~~yD~~t~~W 432 (592)
++ .+|+.+..+ +.++.||+.+++. ..+.....++.. .+..-++ .+| .+... .....+++||+.+++.
T Consensus 50 dg~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~s~dg~~l~-~~~~~--~~~~~i~v~d~~~~~~ 120 (331)
T 3u4y_A 50 DCSNVVVTSDFC-----QTLVQIETQLEPPKVVAIQEGQSSMAD-VDITPDDQFAV-TVTGL--NHPFNMQSYSFLKNKF 120 (331)
T ss_dssp SSCEEEEEESTT-----CEEEEEECSSSSCEEEEEEECSSCCCC-EEECTTSSEEE-ECCCS--SSSCEEEEEETTTTEE
T ss_pred CCCEEEEEeCCC-----CeEEEEECCCCceeEEecccCCCCccc-eEECCCCCEEE-EecCC--CCcccEEEEECCCCCe
Confidence 44 477665533 3799999988764 222222222211 1222244 455 43322 1123899999998876
Q ss_pred EEcccccCcccceEEEEE-CC-EEEEEeccCCCCCCCe-eEEEeCCCCe-E-EE-eccCCCCCceeEEEEE-CC-EEEEE
Q 007704 433 IRTRSMLQKRFALAAAEL-NG-VLYATGGYDGNEYMNS-AERFDPREHY-W-TK-IANMNRRRGCHSLAVL-NG-KLYAL 504 (592)
Q Consensus 433 ~~i~~~p~~R~~~~a~~~-~g-~IYV~GG~~~~~~~~~-v~~yD~~t~~-W-~~-i~~~p~~R~~~s~v~~-~~-~Lyv~ 504 (592)
... ++....-+.++.. ++ .+|+.+..+ .. +.+|+..... . .. ....+.......++.. ++ .+|+.
T Consensus 121 ~~~--~~~~~~~~~~~~spdg~~l~~~~~~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 193 (331)
T 3u4y_A 121 IST--IPIPYDAVGIAISPNGNGLILIDRSS-----ANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVA 193 (331)
T ss_dssp EEE--EECCTTEEEEEECTTSSCEEEEEETT-----TTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEE
T ss_pred EEE--EECCCCccceEECCCCCEEEEEecCC-----CceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEE
Confidence 543 2222222333333 34 578776532 23 6666654321 1 11 1111222222233333 45 47777
Q ss_pred ecCCCCCCCCeEEEEeCCCCeE-EEcCCCCCCCcceEEEEE-CCE-EEEEecccCCCccccEEEEEcCC-CcE
Q 007704 505 GGFDGSAMVPSIEVYDPRLGSW-MSGEPMKLSRGYLGAAVV-KEA-IYVIGGVKNGSEIVDTVERFKEG-QGW 573 (592)
Q Consensus 505 GG~~~~~~~~~v~~yD~~t~~W-~~v~~lp~~R~~~s~~v~-~~~-Iyv~GG~~~~~~~~~~v~~Yd~~-~~W 573 (592)
+.. .+.+.+||+.+.+. +.+..++.......++.. +++ +|+..+.. +.|.+||+. .+.
T Consensus 194 ~~~-----~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~------~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 194 NLI-----GNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTEST------VDVFNFNQLSGTL 255 (331)
T ss_dssp ETT-----TTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSE------EEEEEEETTTTEE
T ss_pred eCC-----CCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCC------CEEEEEECCCCce
Confidence 543 24799999987664 112222222222333333 444 66654422 458899987 555
No 138
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=94.21 E-value=2.6 Score=46.63 Aligned_cols=151 Identities=10% Similarity=0.012 Sum_probs=80.0
Q ss_pred cceEEEEeCCCCeEEEcccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCC-eEEEeccCCCCCc----e
Q 007704 419 FSDVEMLDLDIGKWIRTRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREH-YWTKIANMNRRRG----C 491 (592)
Q Consensus 419 ~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~-~W~~i~~~p~~R~----~ 491 (592)
...++++|+.+++-..+............+.+ +++.++++..+.......++++|+.++ .+..+........ .
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 313 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLH 313 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCS
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccC
Confidence 35799999999876655432111122222222 555444544444344468999999998 7766532111110 1
Q ss_pred eEEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE--CC-EEEEEecccCCCccccEEEE
Q 007704 492 HSLAVL--NGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV--KE-AIYVIGGVKNGSEIVDTVER 566 (592)
Q Consensus 492 ~s~v~~--~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~--~~-~Iyv~GG~~~~~~~~~~v~~ 566 (592)
.....- ++++++.+..++ ...+|.+|......+.+..-... ......+ ++ .||+.+..++ .....||.
T Consensus 314 ~~~~sp~~dg~~l~~~~~~g---~~~l~~~~~~~~~~~~l~~~~~~--v~~~~~~spdg~~l~~~~~~~~--~~~~~l~~ 386 (706)
T 2z3z_A 314 PLTFLPGSNNQFIWQSRRDG---WNHLYLYDTTGRLIRQVTKGEWE--VTNFAGFDPKGTRLYFESTEAS--PLERHFYC 386 (706)
T ss_dssp CCEECTTCSSEEEEEECTTS---SCEEEEEETTSCEEEECCCSSSC--EEEEEEECTTSSEEEEEESSSC--TTCBEEEE
T ss_pred CceeecCCCCEEEEEEccCC---ccEEEEEECCCCEEEecCCCCeE--EEeeeEEcCCCCEEEEEecCCC--CceEEEEE
Confidence 112222 677666665443 46789999777777777432111 1222233 34 4555554322 12356888
Q ss_pred EcCC-CcEEEc
Q 007704 567 FKEG-QGWEEI 576 (592)
Q Consensus 567 Yd~~-~~W~~v 576 (592)
+|.. .....+
T Consensus 387 ~d~~~~~~~~l 397 (706)
T 2z3z_A 387 IDIKGGKTKDL 397 (706)
T ss_dssp EETTCCCCEES
T ss_pred EEcCCCCceec
Confidence 8876 544444
No 139
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=94.19 E-value=1.7 Score=40.96 Aligned_cols=143 Identities=15% Similarity=0.099 Sum_probs=84.7
Q ss_pred eEEEEECCEEEEEeeCCCCCCcceEEEEECCCC--eEE--EC----CCCCCCCcceEEEEE--CCEEEEEecCCCCcccc
Q 007704 351 ASAAMLNGELYIFGGGDGNSWHNTVESYSPAND--EWT--SR----PSLNGTKGSLAGATI--DNKIFAIGGGNGLECFS 420 (592)
Q Consensus 351 ~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~--~W~--~l----~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~ 420 (592)
=+++.+++++|+|=| +.+|+++.... ... .+ +.+|.. -. ++... ++++|+|-| +
T Consensus 10 DAi~~~~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~-ID-Aa~~~~~~~~~yfFkG-------~ 73 (195)
T 1itv_A 10 DAIAEIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADKWPALPRK-LD-SVFEEPLSKKLFFFSG-------R 73 (195)
T ss_dssp SEEEEETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHHCTTSCSS-CS-EEEECTTTCCEEEEET-------T
T ss_pred CEEEEeCCEEEEEEC-------CEEEEEECCccccCCCcEEhhhccCCCCCC-cc-EEEEECCCCeEEEEeC-------C
Confidence 345667999999988 56888887652 221 12 334431 12 22233 688999987 6
Q ss_pred eEEEEeCCCCeE-EEcccccCcc--cceEEEE--ECCEEEEEeccCCCCCCCeeEEEeCCCCeEE-----Ee----ccCC
Q 007704 421 DVEMLDLDIGKW-IRTRSMLQKR--FALAAAE--LNGVLYATGGYDGNEYMNSAERFDPREHYWT-----KI----ANMN 486 (592)
Q Consensus 421 ~v~~yD~~t~~W-~~i~~~p~~R--~~~~a~~--~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~-----~i----~~~p 486 (592)
.+|+|+..+..- +.+..+..+. ...-++. .++++|+|-| +..|+||..+++=. .+ +.+|
T Consensus 74 ~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg-------~~ywr~d~~~~~~~~gyPr~i~~~w~Gvp 146 (195)
T 1itv_A 74 QVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG-------RRLWRFDVKAQMVDPRSASEVDRMFPGVP 146 (195)
T ss_dssp EEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET-------TEEEEEETTTTEECGGGCEEHHHHSTTSC
T ss_pred EEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC-------CEEEEEeCCcccccCCCccChhhcCCCCC
Confidence 788888653211 1122221121 1222333 3689999987 56899998775421 11 1222
Q ss_pred CCCceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCCe
Q 007704 487 RRRGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLGS 525 (592)
Q Consensus 487 ~~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~ 525 (592)
....++...++.+|.|-| +..+.||..+..
T Consensus 147 --~~idaa~~~~g~~Yffkg-------~~y~~~~~~~~~ 176 (195)
T 1itv_A 147 --LDTHDVFQFREKAYFCQD-------RFYWRVSSRSEL 176 (195)
T ss_dssp --SSCSEEEEETTEEEEEET-------TEEEEEECCTTC
T ss_pred --CCCCEEEEeCCeEEEEeC-------CEEEEEECCccE
Confidence 223455556899999987 468899987664
No 140
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.18 E-value=8 Score=43.39 Aligned_cols=120 Identities=16% Similarity=0.214 Sum_probs=72.9
Q ss_pred eEEEEECCEEEEEeeCCCCCCcceEEEEECCCC--eEEECCCCCCC--------CcceEEEEECCEEEEEecCCCCcccc
Q 007704 351 ASAAMLNGELYIFGGGDGNSWHNTVESYSPAND--EWTSRPSLNGT--------KGSLAGATIDNKIFAIGGGNGLECFS 420 (592)
Q Consensus 351 ~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~--~W~~l~~lp~~--------r~~~~~~~~~~~Iyv~GG~~~~~~~~ 420 (592)
.+-++.++.||+.+. .+.++.+|..++ .|+.-...+.. ....+.++.+++||+... ..
T Consensus 64 ~~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~------dg 131 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGP------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL------DG 131 (689)
T ss_dssp CCCEEETTEEEEECG------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TS
T ss_pred ecCEEECCEEEEEcC------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc------CC
Confidence 344567999999765 246999999876 48764332211 011234567888888642 24
Q ss_pred eEEEEeCCCCe--EEEccc-ccC--cccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCe--EEEe
Q 007704 421 DVEMLDLDIGK--WIRTRS-MLQ--KRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHY--WTKI 482 (592)
Q Consensus 421 ~v~~yD~~t~~--W~~i~~-~p~--~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~--W~~i 482 (592)
.++.+|..|++ |+.-.. -+. .....+-++.++.+|+..+......-..++.||+.+++ |+.-
T Consensus 132 ~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 132 RLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 78999998875 775432 111 11222335679998884432111233578999999876 8754
No 141
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=94.15 E-value=1.6 Score=42.51 Aligned_cols=185 Identities=12% Similarity=0.082 Sum_probs=95.2
Q ss_pred CEEEEEeeCCCCCCcceEEEEECCCCeEEEC-CCCCCC---CcceEEEE-ECCEEEEEecCCC----------CcccceE
Q 007704 358 GELYIFGGGDGNSWHNTVESYSPANDEWTSR-PSLNGT---KGSLAGAT-IDNKIFAIGGGNG----------LECFSDV 422 (592)
Q Consensus 358 ~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l-~~lp~~---r~~~~~~~-~~~~Iyv~GG~~~----------~~~~~~v 422 (592)
+.+||.+.. +.+++||+. ++...+ ...... ..-..++. -++++|+...... ......+
T Consensus 83 g~l~v~~~~------~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l 155 (314)
T 1pjx_A 83 NQLFVADMR------LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSI 155 (314)
T ss_dssp SEEEEEETT------TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEE
T ss_pred CcEEEEECC------CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeE
Confidence 788887642 358999998 777665 332211 11223333 2678988764221 1122578
Q ss_pred EEEeCCCCeEEEcc-cccCcccceEEEEE-----CC-EEEEEeccCCCCCCCeeEEEeCC-CCeEEE---eccCCCC--C
Q 007704 423 EMLDLDIGKWIRTR-SMLQKRFALAAAEL-----NG-VLYATGGYDGNEYMNSAERFDPR-EHYWTK---IANMNRR--R 489 (592)
Q Consensus 423 ~~yD~~t~~W~~i~-~~p~~R~~~~a~~~-----~g-~IYV~GG~~~~~~~~~v~~yD~~-t~~W~~---i~~~p~~--R 489 (592)
++||+. ++...+. ....+ ...+.. ++ .+|+.... ...+++||+. ++.+.. ....+.. .
T Consensus 156 ~~~~~~-g~~~~~~~~~~~~---~~i~~~~~~d~dg~~l~v~~~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~ 226 (314)
T 1pjx_A 156 YCFTTD-GQMIQVDTAFQFP---NGIAVRHMNDGRPYQLIVAETP-----TKKLWSYDIKGPAKIENKKVWGHIPGTHEG 226 (314)
T ss_dssp EEECTT-SCEEEEEEEESSE---EEEEEEECTTSCEEEEEEEETT-----TTEEEEEEEEETTEEEEEEEEEECCCCSSC
T ss_pred EEECCC-CCEEEeccCCCCc---ceEEEecccCCCCCEEEEEECC-----CCeEEEEECCCCCccccceEEEECCCCCCC
Confidence 999987 6555432 11111 223333 33 57776532 2578899876 454432 1222221 1
Q ss_pred ceeEEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCE-EEEEecccCCCccccEEEE
Q 007704 490 GCHSLAVL-NGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEA-IYVIGGVKNGSEIVDTVER 566 (592)
Q Consensus 490 ~~~s~v~~-~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~-Iyv~GG~~~~~~~~~~v~~ 566 (592)
.-..++.- ++.||+.... .+.+.+||+.+......-..+. ....+++.- ++. ||+.+..+ +.|++
T Consensus 227 ~p~~i~~d~~G~l~v~~~~-----~~~i~~~d~~~g~~~~~~~~~~-~~~~~i~~~~dg~~l~v~~~~~------~~l~~ 294 (314)
T 1pjx_A 227 GADGMDFDEDNNLLVANWG-----SSHIEVFGPDGGQPKMRIRCPF-EKPSNLHFKPQTKTIFVTEHEN------NAVWK 294 (314)
T ss_dssp EEEEEEEBTTCCEEEEEET-----TTEEEEECTTCBSCSEEEECSS-SCEEEEEECTTSSEEEEEETTT------TEEEE
T ss_pred CCCceEECCCCCEEEEEcC-----CCEEEEEcCCCCcEeEEEeCCC-CCceeEEECCCCCEEEEEeCCC------CeEEE
Confidence 12223332 6788887532 2468999998543221111221 222233332 344 77755432 46999
Q ss_pred EcCC
Q 007704 567 FKEG 570 (592)
Q Consensus 567 Yd~~ 570 (592)
|+++
T Consensus 295 ~~~~ 298 (314)
T 1pjx_A 295 FEWQ 298 (314)
T ss_dssp EECS
T ss_pred EeCC
Confidence 9986
No 142
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.14 E-value=8.6 Score=42.94 Aligned_cols=120 Identities=16% Similarity=0.180 Sum_probs=73.1
Q ss_pred eEEEEECCEEEEEeeCCCCCCcceEEEEECCCC--eEEECCCCCCC--------CcceEEEEECCEEEEEecCCCCcccc
Q 007704 351 ASAAMLNGELYIFGGGDGNSWHNTVESYSPAND--EWTSRPSLNGT--------KGSLAGATIDNKIFAIGGGNGLECFS 420 (592)
Q Consensus 351 ~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~--~W~~l~~lp~~--------r~~~~~~~~~~~Iyv~GG~~~~~~~~ 420 (592)
.+-++.++.||+... ...++.+|..++ .|+.-...+.. ....+.++.+++||+... ..
T Consensus 60 ~~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg 127 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMS------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------DG 127 (668)
T ss_dssp CCCEEETTEEEEEEG------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT------TS
T ss_pred cCCEEECCEEEEECC------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC------CC
Confidence 445667999999865 256999998876 48765332211 011234556888887642 24
Q ss_pred eEEEEeCCCCe--EEEcccccC--cccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCe--EEEe
Q 007704 421 DVEMLDLDIGK--WIRTRSMLQ--KRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHY--WTKI 482 (592)
Q Consensus 421 ~v~~yD~~t~~--W~~i~~~p~--~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~--W~~i 482 (592)
.++.+|..|++ |+.-..-+. .....+.++.++.+|+..+.........++.||+++++ |+.-
T Consensus 128 ~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 128 RLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 78999998875 875332111 12223345678988875432211233579999998875 8764
No 143
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=94.12 E-value=4.6 Score=39.31 Aligned_cols=198 Identities=12% Similarity=0.066 Sum_probs=93.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECC--CCeEEECCCCCCCCcceEEEE-ECCE-EEEEecCCCCcccceEEEEeCCCC-e
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPA--NDEWTSRPSLNGTKGSLAGAT-IDNK-IFAIGGGNGLECFSDVEMLDLDIG-K 431 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~--t~~W~~l~~lp~~r~~~~~~~-~~~~-Iyv~GG~~~~~~~~~v~~yD~~t~-~ 431 (592)
+++.+++++.+. ..+..|+.. ++++..+..++....-..++. -+++ ||+.+..+ ..+.+||+..+ +
T Consensus 48 dg~~l~~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~ 118 (343)
T 1ri6_A 48 DKRYLYVGVRPE----FRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA-----GNVSVTRLEDGLP 118 (343)
T ss_dssp TSSEEEEEETTT----TEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTT-----TEEEEEEEETTEE
T ss_pred CCCEEEEeecCC----CeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCC-----CeEEEEECCCCcc
Confidence 455444444332 356676665 777766543332222222332 2455 55554322 45788887432 2
Q ss_pred EEEcccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCC-CeEEEec----cCCCCCceeEEEEE-CC-EEE
Q 007704 432 WIRTRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPRE-HYWTKIA----NMNRRRGCHSLAVL-NG-KLY 502 (592)
Q Consensus 432 W~~i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t-~~W~~i~----~~p~~R~~~s~v~~-~~-~Ly 502 (592)
...+........-+.++.. +..+|+.+..+ ..+.+||+.+ +....+. ..+.......++.. ++ .+|
T Consensus 119 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~ 193 (343)
T 1ri6_A 119 VGVVDVVEGLDGCHSANISPDNRTLWVPALKQ-----DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAY 193 (343)
T ss_dssp EEEEEEECCCTTBCCCEECTTSSEEEEEEGGG-----TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEE
T ss_pred ccccccccCCCCceEEEECCCCCEEEEecCCC-----CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEE
Confidence 2222222222222223332 34677765332 4688999887 6665432 11222111222222 44 477
Q ss_pred EEecCCCCCCCCeEEEEeCC--CCeEEE---cCCCCCC---Ccce-EEEEE-CC-EEEEEecccCCCccccEEEEEcCC-
Q 007704 503 ALGGFDGSAMVPSIEVYDPR--LGSWMS---GEPMKLS---RGYL-GAAVV-KE-AIYVIGGVKNGSEIVDTVERFKEG- 570 (592)
Q Consensus 503 v~GG~~~~~~~~~v~~yD~~--t~~W~~---v~~lp~~---R~~~-s~~v~-~~-~Iyv~GG~~~~~~~~~~v~~Yd~~- 570 (592)
+.+..+ ..+.+||.. +..++. +..++.. .... .++.. ++ .+|+.++.+ +.+.+||..
T Consensus 194 ~~~~~~-----~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~------~~i~v~d~~~ 262 (343)
T 1ri6_A 194 CVNELN-----SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA------SLITVFSVSE 262 (343)
T ss_dssp EEETTT-----TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT------TEEEEEEECT
T ss_pred EEeCCC-----CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCC------CEEEEEEEcC
Confidence 765432 468888884 344432 3333332 1112 23333 33 566655432 457777764
Q ss_pred --CcEEEcccc
Q 007704 571 --QGWEEINSR 579 (592)
Q Consensus 571 --~~W~~v~~~ 579 (592)
..+..+...
T Consensus 263 ~~~~~~~~~~~ 273 (343)
T 1ri6_A 263 DGSVLSKEGFQ 273 (343)
T ss_dssp TSCCEEEEEEE
T ss_pred CCCceEEeeee
Confidence 356655443
No 144
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=94.10 E-value=2.2 Score=40.32 Aligned_cols=184 Identities=11% Similarity=-0.082 Sum_probs=98.1
Q ss_pred cceEEEEECCCCeEEECCCCCCCCcceEEE-EECCEEEEEecCCCCcccceEEEEeCCC-CeEEEcccccCcccceEEEE
Q 007704 372 HNTVESYSPANDEWTSRPSLNGTKGSLAGA-TIDNKIFAIGGGNGLECFSDVEMLDLDI-GKWIRTRSMLQKRFALAAAE 449 (592)
Q Consensus 372 ~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~-~~~~~Iyv~GG~~~~~~~~~v~~yD~~t-~~W~~i~~~p~~R~~~~a~~ 449 (592)
-..++.+|+.+++...+..... .-.+++ .-+++.+++++ ...++++|+.+ ++...+........-..++.
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 92 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPE--LFEAPNWSPDGKYLLLNS------EGLLYRLSLAGDPSPEKVDTGFATICNNDHGI 92 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESS--CCEEEEECTTSSEEEEEE------TTEEEEEESSSCCSCEECCCTTCCCBCSCCEE
T ss_pred ceeEEEEeCCCCceeeeccCCc--ceEeeEECCCCCEEEEEc------CCeEEEEeCCCCCCceEeccccccccccceEE
Confidence 4679999999988765533211 112222 23677777764 24799999998 87766543332111112222
Q ss_pred -ECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCE-EEEEecCCCCCCCCeEEEEeCCCCeE
Q 007704 450 -LNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGK-LYALGGFDGSAMVPSIEVYDPRLGSW 526 (592)
Q Consensus 450 -~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~-Lyv~GG~~~~~~~~~v~~yD~~t~~W 526 (592)
-+++.+++++.... ....++.+|..+.....+..... ...+... +++ |++.++.++. ..+|.+|..+...
T Consensus 93 spdg~~l~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~~---~~l~~~~~~~~~~ 165 (297)
T 2ojh_A 93 SPDGALYAISDKVEF-GKSAIYLLPSTGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQV---FDIYSMDIDSGVE 165 (297)
T ss_dssp CTTSSEEEEEECTTT-SSCEEEEEETTCCCCEECCSSSS---EEEEEECTTSSEEEEEEEETTE---EEEEEEETTTCCE
T ss_pred CCCCCEEEEEEeCCC-CcceEEEEECCCCceEEeecCCC---ccceEECCCCCEEEEEECCCCc---eEEEEEECCCCcc
Confidence 25555555553221 34678899988777555543322 2222222 444 5545554321 3677888887777
Q ss_pred EEcCCCCCCCcceEEEEE-CCEEEEEec-ccCCCccccEEEEEcCC-CcEEEc
Q 007704 527 MSGEPMKLSRGYLGAAVV-KEAIYVIGG-VKNGSEIVDTVERFKEG-QGWEEI 576 (592)
Q Consensus 527 ~~v~~lp~~R~~~s~~v~-~~~Iyv~GG-~~~~~~~~~~v~~Yd~~-~~W~~v 576 (592)
..+...+.. ...+... ++..+++++ .++ ...+|.++.. .....+
T Consensus 166 ~~~~~~~~~--~~~~~~s~dg~~l~~~~~~~~----~~~i~~~~~~~~~~~~~ 212 (297)
T 2ojh_A 166 TRLTHGEGR--NDGPDYSPDGRWIYFNSSRTG----QMQIWRVRVDGSSVERI 212 (297)
T ss_dssp EECCCSSSC--EEEEEECTTSSEEEEEECTTS----SCEEEEEETTSSCEEEC
T ss_pred eEcccCCCc--cccceECCCCCEEEEEecCCC----CccEEEECCCCCCcEEE
Confidence 766543221 1222222 454444444 232 2567777765 555444
No 145
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=94.08 E-value=2.4 Score=41.81 Aligned_cols=104 Identities=12% Similarity=0.180 Sum_probs=58.9
Q ss_pred CEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE---CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 358 GELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI---DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 358 ~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~---~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
+.+++.|+.++ .+.+||..+.+-... +.........+.+ ++.+++.|+.+ ..+.+||..+++-..
T Consensus 85 ~~~l~~~~~dg-----~i~v~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~ 152 (366)
T 3k26_A 85 HPLLAVAGSRG-----IIRIINPITMQCIKH--YVGHGNAINELKFHPRDPNLLLSVSKD-----HALRLWNIQTDTLVA 152 (366)
T ss_dssp CEEEEEEETTC-----EEEEECTTTCCEEEE--EESCCSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCEEEEecCCC-----EEEEEEchhceEeee--ecCCCCcEEEEEECCCCCCEEEEEeCC-----CeEEEEEeecCeEEE
Confidence 67888888663 688899887654322 1111112222223 56788888754 468899998876543
Q ss_pred cc-cccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCe
Q 007704 435 TR-SMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHY 478 (592)
Q Consensus 435 i~-~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~ 478 (592)
.- .+.........+.+ ++..++.|+.+ ..+.+||+.+..
T Consensus 153 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~ 194 (366)
T 3k26_A 153 IFGGVEGHRDEVLSADYDLLGEKIMSCGMD-----HSLKLWRINSKR 194 (366)
T ss_dssp EECSTTSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESCSHH
T ss_pred EecccccccCceeEEEECCCCCEEEEecCC-----CCEEEEECCCCc
Confidence 31 11111122222222 45666777755 357888887653
No 146
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=94.04 E-value=0.41 Score=48.38 Aligned_cols=186 Identities=14% Similarity=0.172 Sum_probs=94.8
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECC----------CC-CCCCcceEEEEE---CCEEEEEecCCCCcccceE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRP----------SL-NGTKGSLAGATI---DNKIFAIGGGNGLECFSDV 422 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~----------~l-p~~r~~~~~~~~---~~~Iyv~GG~~~~~~~~~v 422 (592)
++.+++.|+.++ .+..||..+....... .. ......-..+.+ ++.+++.|+.+ ..+
T Consensus 55 ~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-----~~i 124 (408)
T 4a11_B 55 EGRYMLSGGSDG-----VIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD-----KTL 124 (408)
T ss_dssp TCCEEEEEETTS-----CEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT-----SEE
T ss_pred CCCEEEEEcCCC-----eEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC-----CeE
Confidence 567888888663 5788888765431110 00 111222223333 55677777654 468
Q ss_pred EEEeCCCCeEEEcccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--C
Q 007704 423 EMLDLDIGKWIRTRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--N 498 (592)
Q Consensus 423 ~~yD~~t~~W~~i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~ 498 (592)
.+||..+.+-...-..+........... ++.+++.|+.+ ..+.+||+.+..-... +.........+.+ +
T Consensus 125 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~d~~~~~~~~~--~~~~~~~v~~~~~~~~ 197 (408)
T 4a11_B 125 KVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG-----PKVQLCDLKSGSCSHI--LQGHRQEILAVSWSPR 197 (408)
T ss_dssp EEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS-----SSEEEEESSSSCCCEE--ECCCCSCEEEEEECSS
T ss_pred EEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCC-----CeEEEEeCCCcceeee--ecCCCCcEEEEEECCC
Confidence 8999988765544332222221111111 34467777655 3578899876542211 1111111222333 3
Q ss_pred CE-EEEEecCCCCCCCCeEEEEeCCCCe--EEEcCC------------CCCCCcceEEEEE--CCEEEEEecccCCCccc
Q 007704 499 GK-LYALGGFDGSAMVPSIEVYDPRLGS--WMSGEP------------MKLSRGYLGAAVV--KEAIYVIGGVKNGSEIV 561 (592)
Q Consensus 499 ~~-Lyv~GG~~~~~~~~~v~~yD~~t~~--W~~v~~------------lp~~R~~~s~~v~--~~~Iyv~GG~~~~~~~~ 561 (592)
+. +++.|+.++ .+.+||..+.. ...+.. ..........+.+ ++..++.|+.++
T Consensus 198 ~~~ll~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----- 267 (408)
T 4a11_B 198 YDYILATASADS-----RVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDN----- 267 (408)
T ss_dssp CTTEEEEEETTS-----CEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTS-----
T ss_pred CCcEEEEEcCCC-----cEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCC-----
Confidence 33 788888654 47888886542 222210 0111122222333 566777777653
Q ss_pred cEEEEEcCC
Q 007704 562 DTVERFKEG 570 (592)
Q Consensus 562 ~~v~~Yd~~ 570 (592)
.+.+||..
T Consensus 268 -~i~vwd~~ 275 (408)
T 4a11_B 268 -RMRLWNSS 275 (408)
T ss_dssp -CEEEEETT
T ss_pred -eEEEEECC
Confidence 38888875
No 147
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=94.03 E-value=0.72 Score=51.56 Aligned_cols=113 Identities=12% Similarity=-0.044 Sum_probs=65.9
Q ss_pred CCEEEEEeeC-CCCCCcceEEEEECCCCeEEECCCCCCCC------------------------cceEEEEECCEEEEEe
Q 007704 357 NGELYIFGGG-DGNSWHNTVESYSPANDEWTSRPSLNGTK------------------------GSLAGATIDNKIFAIG 411 (592)
Q Consensus 357 ~~~Iyv~GG~-~~~~~~~~v~~yd~~t~~W~~l~~lp~~r------------------------~~~~~~~~~~~Iyv~G 411 (592)
+|+.+++++. ++......++.+|..+++...+....... ......+-+++.++++
T Consensus 47 dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~ 126 (741)
T 2ecf_A 47 DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFP 126 (741)
T ss_dssp TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEE
T ss_pred CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEE
Confidence 6777777775 55444568999999999886653221100 1111223367766666
Q ss_pred cCCCCcccceEEEEeCCCC---eEEEcccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEecc
Q 007704 412 GGNGLECFSDVEMLDLDIG---KWIRTRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIAN 484 (592)
Q Consensus 412 G~~~~~~~~~v~~yD~~t~---~W~~i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~ 484 (592)
+. ..++++|..++ .-..+.... .......+ +|+.++++.. ..++++|+.++....+..
T Consensus 127 ~~------~~i~~~d~~~~~~~~~~~l~~~~---~~~~~~~~SPDG~~la~~~~------~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 127 LG------GELYLYDLKQEGKAAVRQLTHGE---GFATDAKLSPKGGFVSFIRG------RNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp ET------TEEEEEESSSCSTTSCCBCCCSS---SCEEEEEECTTSSEEEEEET------TEEEEEETTTTEEEECCC
T ss_pred eC------CcEEEEECCCCCcceEEEcccCC---cccccccCCCCCCEEEEEeC------CcEEEEecCCCCEEEecc
Confidence 53 68999999887 443332211 11122222 5554455432 379999999988777643
No 148
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=94.00 E-value=1.6 Score=49.65 Aligned_cols=167 Identities=11% Similarity=0.179 Sum_probs=96.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCC----CCCcc-eEEEE-ECCEEEEEecCCCCcccceEEEEeCCCC
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLN----GTKGS-LAGAT-IDNKIFAIGGGNGLECFSDVEMLDLDIG 430 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp----~~r~~-~~~~~-~~~~Iyv~GG~~~~~~~~~v~~yD~~t~ 430 (592)
++.|++-.. +-+++||+.+++|....... .+... .+++. -++.||+... .-+++||+.++
T Consensus 462 ~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-------~Gl~~~~~~~~ 527 (795)
T 4a2l_A 462 EGNLWLGTL-------SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-------EGLSVFKQEGL 527 (795)
T ss_dssp SSCEEEEES-------SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-------SCEEEEEEETT
T ss_pred CCCEEEEec-------CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-------CceEEEeCCCC
Confidence 566766432 23899999999998875331 11111 12222 2577887542 35889999998
Q ss_pred eEEEccc------ccCcccceEEEE-ECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEecc---CCCCCceeEEEEE-CC
Q 007704 431 KWIRTRS------MLQKRFALAAAE-LNGVLYATGGYDGNEYMNSAERFDPREHYWTKIAN---MNRRRGCHSLAVL-NG 499 (592)
Q Consensus 431 ~W~~i~~------~p~~R~~~~a~~-~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~---~p~~R~~~s~v~~-~~ 499 (592)
++ .... ++.. .-.+++. .+|.|++... ..+.+||+.++.+..... ++... ..+++.- +|
T Consensus 528 ~~-~~~~~~~~~~l~~~-~i~~i~~d~~g~lWigT~-------~Gl~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d~~g 597 (795)
T 4a2l_A 528 DI-QKASILPVSNVTKL-FTNCIYEASNGIIWVGTR-------EGFYCFNEKDKQIKRYNTTNGLPNNV-VYGILEDSFG 597 (795)
T ss_dssp EE-EECCCSCSCGGGGS-CEEEEEECTTSCEEEEES-------SCEEEEETTTTEEEEECGGGTCSCSC-EEEEEECTTS
T ss_pred eE-EEecCCCCCCCCCC-eeEEEEECCCCCEEEEeC-------CCceeECCCCCcEEEeCCCCCCchhh-eEEEEECCCC
Confidence 88 4321 1111 1122222 2577887432 258999999999887642 33322 2333333 67
Q ss_pred EEEEEecCCCCCCCCeEEEEeCCCCeEEEcC---CCCCCCcce-EEEEE-CCEEEEEeccc
Q 007704 500 KLYALGGFDGSAMVPSIEVYDPRLGSWMSGE---PMKLSRGYL-GAAVV-KEAIYVIGGVK 555 (592)
Q Consensus 500 ~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~---~lp~~R~~~-s~~v~-~~~Iyv~GG~~ 555 (592)
.|++.+. +.+.+||+.+.+++... .++...... +++.. ++.||+ ||.+
T Consensus 598 ~lWi~t~-------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~-g~~~ 650 (795)
T 4a2l_A 598 RLWLSTN-------RGISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYF-GGIN 650 (795)
T ss_dssp CEEEEET-------TEEEEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEE-EETT
T ss_pred CEEEEcC-------CceEEEcCCCCcEEEcCCcCCCccccCccCceeECCCCeEEE-ecCC
Confidence 7887653 35889999999988764 344433322 33333 455554 6653
No 149
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=93.98 E-value=4.6 Score=38.75 Aligned_cols=190 Identities=13% Similarity=-0.017 Sum_probs=104.8
Q ss_pred eEEEEE--CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEe
Q 007704 351 ASAAML--NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLD 426 (592)
Q Consensus 351 ~s~v~~--~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD 426 (592)
+.++.. ++.||+.-.. .+.+++||+.+..-..+..... ..-+.++.. ++.||+.-.. ...+.++|
T Consensus 39 ~gi~~d~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~~-~~p~~ia~d~~~~~lyv~d~~-----~~~I~~~~ 107 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTDIS-----EPSIGRASLHGGEPTTIIRQDL-GSPEGIALDHLGRTIFWTDSQ-----LDRIEVAK 107 (267)
T ss_dssp EEEEEETTTTEEEEEETT-----TTEEEEEESSSCCCEEEECTTC-CCEEEEEEETTTTEEEEEETT-----TTEEEEEE
T ss_pred EEEEEecCCCEEEEEECC-----CCEEEEEecCCCCcEEEEECCC-CCccEEEEEecCCeEEEEECC-----CCEEEEEE
Confidence 344444 5789987542 2578999988764333211111 122334443 5789998642 35788999
Q ss_pred CCCCeEEEcccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCEEE
Q 007704 427 LDIGKWIRTRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGKLY 502 (592)
Q Consensus 427 ~~t~~W~~i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~Ly 502 (592)
+....-+.+......+ -..+++. ++.||+..... ....++++++....-+.+..... ..-..++.- ++.||
T Consensus 108 ~~g~~~~~~~~~~~~~-P~~i~vd~~~g~lyv~~~~~---~~~~I~~~~~dg~~~~~~~~~~~-~~P~gia~d~~~~~ly 182 (267)
T 1npe_A 108 MDGTQRRVLFDTGLVN-PRGIVTDPVRGNLYWTDWNR---DNPKIETSHMDGTNRRILAQDNL-GLPNGLTFDAFSSQLC 182 (267)
T ss_dssp TTSCSCEEEECSSCSS-EEEEEEETTTTEEEEEECCS---SSCEEEEEETTSCCCEEEECTTC-SCEEEEEEETTTTEEE
T ss_pred cCCCCEEEEEECCCCC-ccEEEEeeCCCEEEEEECCC---CCcEEEEEecCCCCcEEEEECCC-CCCcEEEEcCCCCEEE
Confidence 8754333322111111 1233333 68999976321 13578888887544333322111 222334443 57899
Q ss_pred EEecCCCCCCCCeEEEEeCCCCeEEEc-CCCCCCCcceEEEEECCEEEEEecccCCCccccEEEEEcCC
Q 007704 503 ALGGFDGSAMVPSIEVYDPRLGSWMSG-EPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 503 v~GG~~~~~~~~~v~~yD~~t~~W~~v-~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+.... .+.|++||+....-+.+ ..+..| .++++-++.+|+....+ +.|.++|+.
T Consensus 183 v~d~~-----~~~I~~~~~~g~~~~~~~~~~~~P---~gi~~d~~~lyva~~~~------~~v~~~d~~ 237 (267)
T 1npe_A 183 WVDAG-----THRAECLNPAQPGRRKVLEGLQYP---FAVTSYGKNLYYTDWKT------NSVIAMDLA 237 (267)
T ss_dssp EEETT-----TTEEEEEETTEEEEEEEEECCCSE---EEEEEETTEEEEEETTT------TEEEEEETT
T ss_pred EEECC-----CCEEEEEecCCCceEEEecCCCCc---eEEEEeCCEEEEEECCC------CeEEEEeCC
Confidence 98542 35799999876433222 222222 45566688999965432 569999985
No 150
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=93.97 E-value=2.7 Score=46.90 Aligned_cols=210 Identities=10% Similarity=-0.038 Sum_probs=105.9
Q ss_pred CCEEEEEeeCCCC--------CCcceEEEEECCCCeE--EECCCCCCC-CcceEEE-EECCEEEEEecCCCCcccceEEE
Q 007704 357 NGELYIFGGGDGN--------SWHNTVESYSPANDEW--TSRPSLNGT-KGSLAGA-TIDNKIFAIGGGNGLECFSDVEM 424 (592)
Q Consensus 357 ~~~Iyv~GG~~~~--------~~~~~v~~yd~~t~~W--~~l~~lp~~-r~~~~~~-~~~~~Iyv~GG~~~~~~~~~v~~ 424 (592)
+++.++++..+.. .....++.++..+..- ..+-..+.. ....... +-+++..+++..+.. ..+++++
T Consensus 178 Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~l~~ 256 (695)
T 2bkl_A 178 DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW-SENDVYW 256 (695)
T ss_dssp TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT-TEEEEEE
T ss_pred CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC-CceEEEE
Confidence 5666666665432 2345688888877652 222222221 1222222 236665555443221 3468888
Q ss_pred EeCCCCeEEEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCe---EEEeccCCCCCceeEEEEECCEE
Q 007704 425 LDLDIGKWIRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHY---WTKIANMNRRRGCHSLAVLNGKL 501 (592)
Q Consensus 425 yD~~t~~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~---W~~i~~~p~~R~~~s~v~~~~~L 501 (592)
+|..+..|+.+..-..... ..+..++.+|+....+ .....++++|+.+.. |+.+-+.........+...++.|
T Consensus 257 ~~~~~~~~~~l~~~~~~~~--~~~~~~g~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~l 332 (695)
T 2bkl_A 257 KRPGEKDFRLLVKGVGAKY--EVHAWKDRFYVLTDEG--APRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHL 332 (695)
T ss_dssp ECTTCSSCEEEEECSSCCE--EEEEETTEEEEEECTT--CTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEE
T ss_pred EcCCCCceEEeecCCCceE--EEEecCCcEEEEECCC--CCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEE
Confidence 8887788887754222222 2223566666654332 223678999987765 88774332222222333448888
Q ss_pred EEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEE-ECCEEEEEecccCCCccccEEEEEcCC-CcEEEcc
Q 007704 502 YALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAV-VKEAIYVIGGVKNGSEIVDTVERFKEG-QGWEEIN 577 (592)
Q Consensus 502 yv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v-~~~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~W~~v~ 577 (592)
++.+..++ ...++.+++....-+.+. ++......++.. -++..+++...+. ..-.+++.||.. .....+.
T Consensus 333 v~~~~~dg---~~~l~~~~~~g~~~~~l~-~~~~~~v~~~~~s~d~~~l~~~~ss~--~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 333 SLEYLKDA---TSEVRVATLKGKPVRTVQ-LPGVGAASNLMGLEDLDDAYYVFTSF--TTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp EEEEEETT---EEEEEEEETTCCEEEECC-CSSSSEECCCBSCTTCSEEEEEEEET--TEEEEEEEEETTTCCEEEEE
T ss_pred EEEEEECC---EEEEEEEeCCCCeeEEec-CCCCeEEEEeecCCCCCEEEEEEcCC--CCCCEEEEEECCCCcEEEEe
Confidence 88876543 356888887655444442 221111111111 1332222222211 122568888876 5555553
No 151
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=93.96 E-value=2 Score=41.88 Aligned_cols=192 Identities=15% Similarity=0.075 Sum_probs=98.2
Q ss_pred CCEEEEEeeCC--CCCCcceEEEEECCCCeEEECCCC--C-CCCcceEEEEE-C-CEEEEEecCCCCcccceEEEEeCCC
Q 007704 357 NGELYIFGGGD--GNSWHNTVESYSPANDEWTSRPSL--N-GTKGSLAGATI-D-NKIFAIGGGNGLECFSDVEMLDLDI 429 (592)
Q Consensus 357 ~~~Iyv~GG~~--~~~~~~~v~~yd~~t~~W~~l~~l--p-~~r~~~~~~~~-~-~~Iyv~GG~~~~~~~~~v~~yD~~t 429 (592)
++.+|+.++.. .......+++||+.++++..+... . ....-++++.. + +++|+.+.. ..+++||+.
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~------~~l~~~d~~- 100 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR------LGLLVVQTD- 100 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT------TEEEEEETT-
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC------CCEEEEeCC-
Confidence 67888871100 001124699999998888765320 0 00111233332 5 789987641 368999998
Q ss_pred CeEEEc-ccccCc---ccceEEEE-ECCEEEEEeccCC----------CCCCCeeEEEeCCCCeEEEec-cCCCCCceeE
Q 007704 430 GKWIRT-RSMLQK---RFALAAAE-LNGVLYATGGYDG----------NEYMNSAERFDPREHYWTKIA-NMNRRRGCHS 493 (592)
Q Consensus 430 ~~W~~i-~~~p~~---R~~~~a~~-~~g~IYV~GG~~~----------~~~~~~v~~yD~~t~~W~~i~-~~p~~R~~~s 493 (592)
++...+ ...... ..-..++. -++.+|+...... ......+++||+. +....+. ....+ ..
T Consensus 101 g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~---~~ 176 (314)
T 1pjx_A 101 GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFP---NG 176 (314)
T ss_dssp SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSE---EE
T ss_pred CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCc---ce
Confidence 777665 322111 11122322 2678888764321 1122578999987 5555442 11111 23
Q ss_pred EEEE-----CC-EEEEEecCCCCCCCCeEEEEeCC-CCeEEE---cCCCCCC--CcceEEEEE-CCEEEEEecccCCCcc
Q 007704 494 LAVL-----NG-KLYALGGFDGSAMVPSIEVYDPR-LGSWMS---GEPMKLS--RGYLGAAVV-KEAIYVIGGVKNGSEI 560 (592)
Q Consensus 494 ~v~~-----~~-~Lyv~GG~~~~~~~~~v~~yD~~-t~~W~~---v~~lp~~--R~~~s~~v~-~~~Iyv~GG~~~~~~~ 560 (592)
++.. ++ .||+.... ...+++||+. +..+.. ...++.. .....++.- ++.+|+.....
T Consensus 177 i~~~~~~d~dg~~l~v~~~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~----- 246 (314)
T 1pjx_A 177 IAVRHMNDGRPYQLIVAETP-----TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS----- 246 (314)
T ss_dssp EEEEECTTSCEEEEEEEETT-----TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT-----
T ss_pred EEEecccCCCCCEEEEEECC-----CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCC-----
Confidence 3333 33 57776532 2468889875 444322 1122211 112233332 57788764322
Q ss_pred ccEEEEEcCC
Q 007704 561 VDTVERFKEG 570 (592)
Q Consensus 561 ~~~v~~Yd~~ 570 (592)
+.|.+||++
T Consensus 247 -~~i~~~d~~ 255 (314)
T 1pjx_A 247 -SHIEVFGPD 255 (314)
T ss_dssp -TEEEEECTT
T ss_pred -CEEEEEcCC
Confidence 458888876
No 152
>2p5d_A UPF0310 protein mjecl36; NPPSFA, national project on protein structural and functional analyses; 1.70A {Methanocaldococcus jannaschii}
Probab=93.87 E-value=0.048 Score=49.36 Aligned_cols=95 Identities=16% Similarity=0.265 Sum_probs=69.1
Q ss_pred EEeecCCChHHHhhhccccCCccCccchhccCCCCeEEEE-----ecC--CCeEeeEEEeccCCCccccCCCCCCCC---
Q 007704 22 IFGCKKSTIKECLAKQLFGLPAQHFLYVRKVDPGLPLFLF-----NYT--DRKLHGIFEAASPGMMNINPYGWTDGS--- 91 (592)
Q Consensus 22 if~c~~~t~~e~~~~~~fgl~~~~~~~v~~i~~g~~lfl~-----~~~--~~~l~g~~~a~s~g~~~~~~~a~~~~~--- 91 (592)
|+..+...-+.+.+.+++|.+..+..+.+.+|+|..+|.| -=. .+..-||.|.++. -..+|.+|...+
T Consensus 8 L~~se~~~~~~~~~~g~wGVn~~arn~lr~Mk~GD~~~fY~~~~~hs~~~~~~ivGi~eV~~e--~y~D~t~~dp~~~y~ 85 (147)
T 2p5d_A 8 LCITNEDNWKVIKEKKIWGVAERYKNTINKVKVGDKLIIYEIQRSGKDYKPPYIRGVYEVVSE--VYKDSSKIFKPTPRN 85 (147)
T ss_dssp EEEECHHHHHHHHHHCEEEECGGGHHHHTTCCTTCEEEEEECCBCSTTCBCCEEEEEEEECSC--CEECCCCCSCCBTTB
T ss_pred eeecCHHHHHHHHHcCeeecCHHHHHHHHhCCCCCEEEEEEecccCCCCCCCEEEEEEEEecc--cccCCcccCcCccCc
Confidence 4444555566777888999999999999999999999999 322 4789999999994 467888876211
Q ss_pred CCCCCCceEEEEEeee-ecCCCCCcchh
Q 007704 92 ERTSYPAQVQIRVRMQ-CQPLNEEKFKP 118 (592)
Q Consensus 92 ~~~~~paqv~~~~~~~-~~pl~e~~~~~ 118 (592)
...++|.-|.++.... ..|++=.++|+
T Consensus 86 ~~~~~w~~VdV~~v~~~~~~v~L~~Lk~ 113 (147)
T 2p5d_A 86 PNEKFPYRVKLKEIKVFEPPINFKELIP 113 (147)
T ss_dssp TTCCCCEEEEEEEEEEEEEEEEHHHHGG
T ss_pred CCCCCceEEEEEEEeecCCccCHHHHHh
Confidence 1467888888876544 35666555553
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=93.87 E-value=1.4 Score=44.16 Aligned_cols=112 Identities=12% Similarity=0.006 Sum_probs=55.8
Q ss_pred EEEEEeeCCC-CCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCE-EEEEecCCCCcccceEEEEeCCCCeEEEcc
Q 007704 359 ELYIFGGGDG-NSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNK-IFAIGGGNGLECFSDVEMLDLDIGKWIRTR 436 (592)
Q Consensus 359 ~Iyv~GG~~~-~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~-Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~ 436 (592)
..+++|.+.. ...--.+|.+|..++++..+.........+.+..-+++ ||+.+........-.+|.+|..+++.+.+.
T Consensus 14 ~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~ 93 (361)
T 3scy_A 14 LTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLN 93 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEE
T ss_pred eEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEee
Confidence 3445676553 22223466678888888766443222222223333555 666654211111223455666668887776
Q ss_pred cccCcccc-eEEEEECC-EEEEEeccCCCCCCCeeEEEeCCC
Q 007704 437 SMLQKRFA-LAAAELNG-VLYATGGYDGNEYMNSAERFDPRE 476 (592)
Q Consensus 437 ~~p~~R~~-~~a~~~~g-~IYV~GG~~~~~~~~~v~~yD~~t 476 (592)
..+..... +..+. ++ .+|+.+..+ ..+.+||+.+
T Consensus 94 ~~~~~~~~p~~~~~-dg~~l~~~~~~~-----~~v~~~~~~~ 129 (361)
T 3scy_A 94 TQKTMGADPCYLTT-NGKNIVTANYSG-----GSITVFPIGQ 129 (361)
T ss_dssp EEECSSSCEEEEEE-CSSEEEEEETTT-----TEEEEEEBCT
T ss_pred EeccCCCCcEEEEE-CCCEEEEEECCC-----CEEEEEEeCC
Confidence 54432222 22233 55 466654322 4677888764
No 154
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=93.85 E-value=0.12 Score=52.38 Aligned_cols=145 Identities=14% Similarity=0.202 Sum_probs=75.9
Q ss_pred CCEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCe-EE
Q 007704 404 DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHY-WT 480 (592)
Q Consensus 404 ~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~-W~ 480 (592)
++++++.|+.+ ..+.+||..++.|..+..+......-..+.+ ++.+++.|+.+ ..+.+||+.++. |.
T Consensus 22 ~g~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 22 QRTEFVTTTAT-----NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD-----RNAYVYEKRPDGTWK 91 (377)
T ss_dssp SSSEEECCCSS-----SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT-----SSEEEC------CCC
T ss_pred CCCEEEEecCC-----CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC-----CeEEEEEcCCCCcee
Confidence 67777777654 4677889989888877666543322222333 56777777765 357888888776 54
Q ss_pred EeccCCCCCceeEEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCe-EEEcCCCCC--CCcceEEEEE-CCEEEEEecc
Q 007704 481 KIANMNRRRGCHSLAVL--NGKLYALGGFDGSAMVPSIEVYDPRLGS-WMSGEPMKL--SRGYLGAAVV-KEAIYVIGGV 554 (592)
Q Consensus 481 ~i~~~p~~R~~~s~v~~--~~~Lyv~GG~~~~~~~~~v~~yD~~t~~-W~~v~~lp~--~R~~~s~~v~-~~~Iyv~GG~ 554 (592)
....+.........+.+ ++.+++.|+.++ .+.+||..+.. |..+..+.. .....+++.. ++.+++.|+.
T Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 92 QTLVLLRLNRAATFVRWSPNEDKFAVGSGAR-----VISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp CEEECCCCSSCEEEEECCTTSSCCEEEESSS-----CEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred eeeEecccCCceEEEEECCCCCEEEEEecCC-----eEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence 43333222222223333 677778887654 47778877654 332222222 2222233333 5667777776
Q ss_pred cCCCccccEEEEEcC
Q 007704 555 KNGSEIVDTVERFKE 569 (592)
Q Consensus 555 ~~~~~~~~~v~~Yd~ 569 (592)
++ .+.+||.
T Consensus 167 d~------~i~iwd~ 175 (377)
T 3dwl_C 167 DR------KAYVLSA 175 (377)
T ss_dssp SS------CEEEEEE
T ss_pred CC------EEEEEEE
Confidence 53 3777775
No 155
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=93.85 E-value=1.4 Score=47.42 Aligned_cols=188 Identities=13% Similarity=0.140 Sum_probs=94.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCC------eEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCC
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPAND------EWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLD 428 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~------~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~ 428 (592)
++++++.|+.++ .+.+||..+. ....+..+.........+.+ +++.++.+|.+.. ....++++|.
T Consensus 77 ~~~~l~s~~~dg-----~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~-~~~~v~~~d~- 149 (615)
T 1pgu_A 77 GSQYLCSGDESG-----KVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRD-NFGVFISWDS- 149 (615)
T ss_dssp TCCEEEEEETTS-----EEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSS-CSEEEEETTT-
T ss_pred CCCEEEEecCCC-----EEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCC-CccEEEEEEC-
Confidence 567888888653 5777777544 33333222222222222222 6677777764322 2346777773
Q ss_pred CCeEEEcccccCcccc-eEEEEE-CCE-EEEEeccCCCCCCCeeEEEeCCCCeEEEe-ccCCCCC-ceeEEEEE-C-CEE
Q 007704 429 IGKWIRTRSMLQKRFA-LAAAEL-NGV-LYATGGYDGNEYMNSAERFDPREHYWTKI-ANMNRRR-GCHSLAVL-N-GKL 501 (592)
Q Consensus 429 t~~W~~i~~~p~~R~~-~~a~~~-~g~-IYV~GG~~~~~~~~~v~~yD~~t~~W~~i-~~~p~~R-~~~s~v~~-~-~~L 501 (592)
.+-. ..+...... .+++.. ++. +++.|+.+ ..+.+||..+..-... ....... ...+++.. + +..
T Consensus 150 -~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 221 (615)
T 1pgu_A 150 -GNSL--GEVSGHSQRINACHLKQSRPMRSMTVGDD-----GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEF 221 (615)
T ss_dssp -CCEE--EECCSCSSCEEEEEECSSSSCEEEEEETT-----TEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCE
T ss_pred -CCcc--eeeecCCccEEEEEECCCCCcEEEEEeCC-----CcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCE
Confidence 2211 111111111 122222 333 67777654 4688899877654332 1111100 22233333 5 778
Q ss_pred EEEecCCCCCCCCeEEEEeCCCCeEEEcC-CC--CCCCcceEEEEECCEEEEEecccCCCccccEEEEEcCC
Q 007704 502 YALGGFDGSAMVPSIEVYDPRLGSWMSGE-PM--KLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 502 yv~GG~~~~~~~~~v~~yD~~t~~W~~v~-~l--p~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
++.|+.++ .+.+||..+......- .. .......+++..++..++.|+.+ ..+.+||..
T Consensus 222 l~~~~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d------~~i~~wd~~ 282 (615)
T 1pgu_A 222 VITVGSDR-----KISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGAD------ATIRVWDVT 282 (615)
T ss_dssp EEEEETTC-----CEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETT------SEEEEEETT
T ss_pred EEEEeCCC-----eEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCC------CcEEEEECC
Confidence 88888653 5889998877654422 10 12222222222267777777754 358888876
No 156
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=93.78 E-value=1.5 Score=47.68 Aligned_cols=188 Identities=5% Similarity=-0.025 Sum_probs=94.1
Q ss_pred ceEEEEEC--CCCeEEECCCCCCCCcceEEEE-E----CCEEEEEecCCCCcccceEEEEeCCCCeEEEc-c--cc----
Q 007704 373 NTVESYSP--ANDEWTSRPSLNGTKGSLAGAT-I----DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRT-R--SM---- 438 (592)
Q Consensus 373 ~~v~~yd~--~t~~W~~l~~lp~~r~~~~~~~-~----~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i-~--~~---- 438 (592)
+.+..||+ .+.+-.. .++....-..++. - +++..++++. ..+.+.++|..+.+-... + .+
T Consensus 200 ~~V~v~D~~~~t~~~~~--~i~~g~~p~~va~sp~~~~dg~~l~v~~~----~~~~v~v~D~~t~~~~~~i~~~g~~~~~ 273 (543)
T 1nir_A 200 ARIDMIDLWAKEPTKVA--EIKIGIEARSVESSKFKGYEDRYTIAGAY----WPPQFAIMDGETLEPKQIVSTRGMTVDT 273 (543)
T ss_dssp SEEEEEETTSSSCEEEE--EEECCSEEEEEEECCSTTCTTTEEEEEEE----ESSEEEEEETTTCCEEEEEECCEECSSS
T ss_pred CeEEEEECcCCCCcEEE--EEecCCCcceEEeCCCcCCCCCEEEEEEc----cCCeEEEEeccccccceeecccCcccCc
Confidence 67999999 6655322 2222222223333 2 5554444432 235788899887754332 1 11
Q ss_pred ----cCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCE-EEEEecCCCCC
Q 007704 439 ----LQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGK-LYALGGFDGSA 511 (592)
Q Consensus 439 ----p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~-Lyv~GG~~~~~ 511 (592)
+.+|........ ++.+|+.+.. ...++++|..+..-..+...+..+.-+.++.- +++ +|+.+..
T Consensus 274 ~~~~~~~~v~~i~~s~~~~~~~vs~~~-----~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~---- 344 (543)
T 1nir_A 274 QTYHPEPRVAAIIASHEHPEFIVNVKE-----TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANN---- 344 (543)
T ss_dssp CCEESCCCEEEEEECSSSSEEEEEETT-----TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGG----
T ss_pred cccccCCceEEEEECCCCCEEEEEECC-----CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecC----
Confidence 112222222222 4455555432 25788898876432111111223333333333 555 5554432
Q ss_pred CCCeEEEEeCCCCeEEE---cCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC--C----cEEEccccCC
Q 007704 512 MVPSIEVYDPRLGSWMS---GEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG--Q----GWEEINSRAI 581 (592)
Q Consensus 512 ~~~~v~~yD~~t~~W~~---v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~--~----~W~~v~~~p~ 581 (592)
.+.|.++|+.+++-.. ++..|.+........- ++.+|+.+...+ ++|-+||.. . .|..+..++.
T Consensus 345 -~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d-----~~V~v~d~~~~~~~~~~~~~v~~l~~ 418 (543)
T 1nir_A 345 -SNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGD-----GSISLIGTDPKNHPQYAWKKVAELQG 418 (543)
T ss_dssp -GTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSS-----SEEEEEECCTTTCTTTBTSEEEEEEC
T ss_pred -CCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCC-----ceEEEEEeCCCCCchhcCeEEEEEEc
Confidence 3578899999987544 2345555333332222 367888765432 457777764 1 2877665553
No 157
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=93.78 E-value=1.7 Score=42.83 Aligned_cols=145 Identities=14% Similarity=0.245 Sum_probs=75.6
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCe--EEECCCCCC--CCcceEEE-----EECCEEEEEecCCCCcccceEEEEeC
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDE--WTSRPSLNG--TKGSLAGA-----TIDNKIFAIGGGNGLECFSDVEMLDL 427 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~--W~~l~~lp~--~r~~~~~~-----~~~~~Iyv~GG~~~~~~~~~v~~yD~ 427 (592)
++..++.|+.++ .+..||..+.. ...+..... .+...+++ ..++++++.|+.+ ..+.+||.
T Consensus 128 ~~~~l~~~~~d~-----~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~d~ 197 (357)
T 3i2n_A 128 GAPEIVTGSRDG-----TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN-----GDIKLFDL 197 (357)
T ss_dssp CCCEEEEEETTS-----CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT-----SEEEEEET
T ss_pred CccEEEEEeCCC-----eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC-----CeEEEEEC
Confidence 566777787653 57888888764 333322221 11222222 1367788887754 47889999
Q ss_pred CCCeEEEcccccCcccceEEEEE----CCEEEEEeccCCCCCCCeeEEEeCCCCe----EEEeccCCCCCceeEEEEE-C
Q 007704 428 DIGKWIRTRSMLQKRFALAAAEL----NGVLYATGGYDGNEYMNSAERFDPREHY----WTKIANMNRRRGCHSLAVL-N 498 (592)
Q Consensus 428 ~t~~W~~i~~~p~~R~~~~a~~~----~g~IYV~GG~~~~~~~~~v~~yD~~t~~----W~~i~~~p~~R~~~s~v~~-~ 498 (592)
.+.+-...... ...-.+++.. ++..++.|+.+ ..+.+||+.+.. +.............++... +
T Consensus 198 ~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 270 (357)
T 3i2n_A 198 RNMALRWETNI--KNGVCSLEFDRKDISMNKLVATSLE-----GKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQ 270 (357)
T ss_dssp TTTEEEEEEEC--SSCEEEEEESCSSSSCCEEEEEEST-----TEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETT
T ss_pred ccCceeeecCC--CCceEEEEcCCCCCCCCEEEEECCC-----CeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCC
Confidence 88764332221 1122233332 45667777654 356777765432 1111000122222333333 4
Q ss_pred CE-EEEEecCCCCCCCCeEEEEeCCC
Q 007704 499 GK-LYALGGFDGSAMVPSIEVYDPRL 523 (592)
Q Consensus 499 ~~-Lyv~GG~~~~~~~~~v~~yD~~t 523 (592)
+. +++.|+.++ .+.+||..+
T Consensus 271 ~~~~l~~~~~dg-----~i~iwd~~~ 291 (357)
T 3i2n_A 271 NRELFLTAGGAG-----GLHLWKYEY 291 (357)
T ss_dssp EEEEEEEEETTS-----EEEEEEEEC
T ss_pred CCcEEEEEeCCC-----cEEEeecCC
Confidence 55 777787654 567777654
No 158
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=93.73 E-value=3.2 Score=41.19 Aligned_cols=199 Identities=11% Similarity=0.103 Sum_probs=97.9
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCC--CCCcceEEEEECCE-EEEEecCCCCcccceEEEEeCC-CCeE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLN--GTKGSLAGATIDNK-IFAIGGGNGLECFSDVEMLDLD-IGKW 432 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp--~~r~~~~~~~~~~~-Iyv~GG~~~~~~~~~v~~yD~~-t~~W 432 (592)
+++||+.+... .-..++.||+.+++++.+.... .....+.+..-+++ ||+.+.. ...+.+||+. +++.
T Consensus 50 dg~l~~~~~~~---~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~-----~~~v~v~~~~~~g~~ 121 (347)
T 3hfq_A 50 KDCLYSVDKED---DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYH-----KGTAEVMKIAADGAL 121 (347)
T ss_dssp TCEEEEEEEET---TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETT-----TTEEEEEEECTTSCE
T ss_pred CCeEEEEEecC---CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCC-----CCEEEEEEeCCCCCe
Confidence 67777766421 1256899999888876654322 11222222333555 6665422 2467788874 3444
Q ss_pred EEcccccC------cc----cceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCC-CCeEEEecc--CCCCCceeEEEEE-
Q 007704 433 IRTRSMLQ------KR----FALAAAEL-NGVLYATGGYDGNEYMNSAERFDPR-EHYWTKIAN--MNRRRGCHSLAVL- 497 (592)
Q Consensus 433 ~~i~~~p~------~R----~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~-t~~W~~i~~--~p~~R~~~s~v~~- 497 (592)
..+..... +| .-+.++.. ++++|+.+..+ +.+.+||+. ++....+.. .+.... ...+.+
T Consensus 122 ~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~-----~~v~~~~~~~~g~~~~~~~~~~~~g~~-p~~~~~s 195 (347)
T 3hfq_A 122 TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS-----DKVYVYNVSDAGQLSEQSVLTMEAGFG-PRHLVFS 195 (347)
T ss_dssp EEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT-----TEEEEEEECTTSCEEEEEEEECCTTCC-EEEEEEC
T ss_pred eecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC-----CEEEEEEECCCCcEEEeeeEEcCCCCC-CceEEEC
Confidence 43322211 11 12223332 56677765422 468889987 566654432 222211 122333
Q ss_pred -CCE-EEEEecCCCCCCCCeEEEEe--CCCCeEEEcC---CCCCC---CcceEEEEE--CC-EEEEEecccCCCccccEE
Q 007704 498 -NGK-LYALGGFDGSAMVPSIEVYD--PRLGSWMSGE---PMKLS---RGYLGAAVV--KE-AIYVIGGVKNGSEIVDTV 564 (592)
Q Consensus 498 -~~~-Lyv~GG~~~~~~~~~v~~yD--~~t~~W~~v~---~lp~~---R~~~s~~v~--~~-~Iyv~GG~~~~~~~~~~v 564 (592)
+++ ||+.+..+ +.+.+|+ ..+..++.+. ..+.. ......+.+ ++ .||+.+..+ +.|
T Consensus 196 pdg~~l~v~~~~~-----~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~------~~v 264 (347)
T 3hfq_A 196 PDGQYAFLAGELS-----SQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY------NTL 264 (347)
T ss_dssp TTSSEEEEEETTT-----TEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT------TEE
T ss_pred CCCCEEEEEeCCC-----CEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC------CEE
Confidence 554 77765432 3455554 4457765543 22221 111222333 44 477765432 457
Q ss_pred EEEcCC--CcEEEccccC
Q 007704 565 ERFKEG--QGWEEINSRA 580 (592)
Q Consensus 565 ~~Yd~~--~~W~~v~~~p 580 (592)
.+||.. ..+..+...+
T Consensus 265 ~v~~~~~~g~~~~~~~~~ 282 (347)
T 3hfq_A 265 AVFAVTADGHLTLIQQIS 282 (347)
T ss_dssp EEEEECGGGCEEEEEEEE
T ss_pred EEEEECCCCcEEEeEEEe
Confidence 888865 3555554433
No 159
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=93.56 E-value=5.7 Score=38.47 Aligned_cols=183 Identities=14% Similarity=0.056 Sum_probs=97.8
Q ss_pred CEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEE-ECCEEEEEecCCCCcccceEEEEeCCCCeEEEcc
Q 007704 358 GELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGAT-IDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTR 436 (592)
Q Consensus 358 ~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~ 436 (592)
+.||+.+..+ ..+++||+.+. ...... +. ..-.+++. -++++|+.... ...+.+||+.+++.+.+.
T Consensus 40 ~~l~~~~~~~-----~~i~~~~~~~~-~~~~~~-~~-~~~~~l~~~~dg~l~v~~~~-----~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 40 SAVIFSDVRQ-----NRTWAWSDDGQ-LSPEMH-PS-HHQNGHCLNKQGHLIACSHG-----LRRLERQREPGGEWESIA 106 (296)
T ss_dssp TEEEEEEGGG-----TEEEEEETTSC-EEEEES-SC-SSEEEEEECTTCCEEEEETT-----TTEEEEECSTTCCEEEEE
T ss_pred CEEEEEeCCC-----CEEEEEECCCC-eEEEEC-CC-CCcceeeECCCCcEEEEecC-----CCeEEEEcCCCCcEEEEe
Confidence 3588887643 46899999988 655432 11 11223333 26788877532 247899999888887653
Q ss_pred cccC----cccceEEEEECCEEEEE----eccCC--------CCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CC
Q 007704 437 SMLQ----KRFALAAAELNGVLYAT----GGYDG--------NEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NG 499 (592)
Q Consensus 437 ~~p~----~R~~~~a~~~~g~IYV~----GG~~~--------~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~ 499 (592)
.... .+....+..-+|.+|+. |.... ......+++||+. +....+... .....+++.- ++
T Consensus 107 ~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--~~~~~gi~~s~dg 183 (296)
T 3e5z_A 107 DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRD--RVKPNGLAFLPSG 183 (296)
T ss_dssp CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECC--CSSEEEEEECTTS
T ss_pred eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecC--CCCCccEEECCCC
Confidence 2211 11112222237789987 43110 1113478999988 555544221 1111233332 56
Q ss_pred EEEEEecCCCCCCCCeEEEEeCC-CCeE---EEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 500 KLYALGGFDGSAMVPSIEVYDPR-LGSW---MSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 500 ~Lyv~GG~~~~~~~~~v~~yD~~-t~~W---~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
++++.+.. ...+++||+. +.+. ..+-... .....+++.- ++.||+.. . +.|.+||++
T Consensus 184 ~~lv~~~~-----~~~i~~~~~~~~g~~~~~~~~~~~~-~~~p~~i~~d~~G~l~v~~--~------~~v~~~~~~ 245 (296)
T 3e5z_A 184 NLLVSDTG-----DNATHRYCLNARGETEYQGVHFTVE-PGKTDGLRVDAGGLIWASA--G------DGVHVLTPD 245 (296)
T ss_dssp CEEEEETT-----TTEEEEEEECSSSCEEEEEEEECCS-SSCCCSEEEBTTSCEEEEE--T------TEEEEECTT
T ss_pred CEEEEeCC-----CCeEEEEEECCCCcCcCCCeEeeCC-CCCCCeEEECCCCCEEEEc--C------CeEEEECCC
Confidence 66644432 2478899886 4455 1111111 1111223332 67788866 1 458999987
No 160
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=93.51 E-value=0.78 Score=46.24 Aligned_cols=104 Identities=17% Similarity=0.178 Sum_probs=56.0
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
++.+++.|+.+ ..+..||..+.+....-..+.+......... ++.+++.|+.+ ..+.+||+.+.+-..
T Consensus 111 ~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~d~~~~~~~~ 180 (408)
T 4a11_B 111 DTGMFTSSSFD-----KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG-----PKVQLCDLKSGSCSH 180 (408)
T ss_dssp CTTCEEEEETT-----SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS-----SSEEEEESSSSCCCE
T ss_pred CCcEEEEEeCC-----CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCC-----CeEEEEeCCCcceee
Confidence 45677788765 4688999988776544333222222111111 34477777654 468889987664322
Q ss_pred cccccCcccc-eEEEEE-CC-EEEEEeccCCCCCCCeeEEEeCCCC
Q 007704 435 TRSMLQKRFA-LAAAEL-NG-VLYATGGYDGNEYMNSAERFDPREH 477 (592)
Q Consensus 435 i~~~p~~R~~-~~a~~~-~g-~IYV~GG~~~~~~~~~v~~yD~~t~ 477 (592)
.+...... .+++.. ++ .+++.|+.++ .+.+||+.+.
T Consensus 181 --~~~~~~~~v~~~~~~~~~~~ll~~~~~dg-----~i~i~d~~~~ 219 (408)
T 4a11_B 181 --ILQGHRQEILAVSWSPRYDYILATASADS-----RVKLWDVRRA 219 (408)
T ss_dssp --EECCCCSCEEEEEECSSCTTEEEEEETTS-----CEEEEETTCS
T ss_pred --eecCCCCcEEEEEECCCCCcEEEEEcCCC-----cEEEEECCCC
Confidence 11111111 122222 23 3777777653 4778887654
No 161
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=93.50 E-value=5.5 Score=44.05 Aligned_cols=121 Identities=15% Similarity=0.194 Sum_probs=71.1
Q ss_pred eEEEEECCEEEEEeeCCCCCCcceEEEEEC-CCC--eEEECCCCCCC-----C---cceEEEE--ECCE----EEEEecC
Q 007704 351 ASAAMLNGELYIFGGGDGNSWHNTVESYSP-AND--EWTSRPSLNGT-----K---GSLAGAT--IDNK----IFAIGGG 413 (592)
Q Consensus 351 ~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~-~t~--~W~~l~~lp~~-----r---~~~~~~~--~~~~----Iyv~GG~ 413 (592)
.+-++.++.||+.+.. .+.++++|. .++ .|+.-...+.. + .....++ .+++ ||+...
T Consensus 56 ~tP~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~- 129 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL- 129 (599)
T ss_dssp SCCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-
T ss_pred eccEEECCEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-
Confidence 4556679999998652 246999999 776 58775433211 1 1122344 5777 877532
Q ss_pred CCCcccceEEEEeCCCCe--EEEcc-cccCc-ccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCe--EEEe
Q 007704 414 NGLECFSDVEMLDLDIGK--WIRTR-SMLQK-RFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHY--WTKI 482 (592)
Q Consensus 414 ~~~~~~~~v~~yD~~t~~--W~~i~-~~p~~-R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~--W~~i 482 (592)
...++.+|..|++ |+.-. ..... ....+-++.++.+|+-.+.........++.||.++++ |+.-
T Consensus 130 -----dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 130 -----DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp -----TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred -----CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 2478899998875 77532 11110 1122334578988875432111123578999999875 8764
No 162
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=93.46 E-value=2.5 Score=41.61 Aligned_cols=183 Identities=13% Similarity=0.185 Sum_probs=93.0
Q ss_pred EEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--C---CEEEEEecCCCCcccceEEEEeCCCCe--
Q 007704 359 ELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--D---NKIFAIGGGNGLECFSDVEMLDLDIGK-- 431 (592)
Q Consensus 359 ~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~---~~Iyv~GG~~~~~~~~~v~~yD~~t~~-- 431 (592)
.+++.|+.+. .-..+..||..+++............ ..++.+ + +.+++.|+.+ ..+.+||..+.+
T Consensus 32 ~l~~~~s~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~ 103 (357)
T 3i2n_A 32 KFVTMGNFAR--GTGVIQLYEIQHGDLKLLREIEKAKP-IKCGTFGATSLQQRYLATGDFG-----GNLHIWNLEAPEMP 103 (357)
T ss_dssp EEEEEEC--C--CCEEEEEEEECSSSEEEEEEEEESSC-EEEEECTTCCTTTCCEEEEETT-----SCEEEECTTSCSSC
T ss_pred eEEEecCccC--CCcEEEEEeCCCCcccceeeecccCc-EEEEEEcCCCCCCceEEEecCC-----CeEEEEeCCCCCcc
Confidence 5666665411 01468889988877654322211111 122222 2 4777777754 367888887664
Q ss_pred EEEcccccCcccceEEE-------EECCEEEEEeccCCCCCCCeeEEEeCCCCe--EEEeccCCC--CCceeEEEE----
Q 007704 432 WIRTRSMLQKRFALAAA-------ELNGVLYATGGYDGNEYMNSAERFDPREHY--WTKIANMNR--RRGCHSLAV---- 496 (592)
Q Consensus 432 W~~i~~~p~~R~~~~a~-------~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~--W~~i~~~p~--~R~~~s~v~---- 496 (592)
-..+..... .-.++. .-++..++.|+.+ ..+.+||+.+.. ...+..... .+...+++.
T Consensus 104 ~~~~~~~~~--~v~~~~~~~~~~~s~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 176 (357)
T 3i2n_A 104 VYSVKGHKE--IINAIDGIGGLGIGEGAPEIVTGSRD-----GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAY 176 (357)
T ss_dssp SEEECCCSS--CEEEEEEESGGGCC-CCCEEEEEETT-----SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCC
T ss_pred EEEEEeccc--ceEEEeeccccccCCCccEEEEEeCC-----CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEecc
Confidence 111111111 111111 1245667777755 357889988764 333332221 222333331
Q ss_pred -ECCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE----CCEEEEEecccCCCccccEEEEEcC
Q 007704 497 -LNGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV----KEAIYVIGGVKNGSEIVDTVERFKE 569 (592)
Q Consensus 497 -~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~----~~~Iyv~GG~~~~~~~~~~v~~Yd~ 569 (592)
-++.+++.|+.+ ..+.+||..+..-...... .....+++.. ++..+++|+.+ ..|.+||.
T Consensus 177 ~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~l~~~~~d------g~i~i~d~ 241 (357)
T 3i2n_A 177 NQEERVVCAGYDN-----GDIKLFDLRNMALRWETNI--KNGVCSLEFDRKDISMNKLVATSLE------GKFHVFDM 241 (357)
T ss_dssp C-CCCEEEEEETT-----SEEEEEETTTTEEEEEEEC--SSCEEEEEESCSSSSCCEEEEEEST------TEEEEEEE
T ss_pred CCCCCEEEEEccC-----CeEEEEECccCceeeecCC--CCceEEEEcCCCCCCCCEEEEECCC------CeEEEEeC
Confidence 367778887754 3688999988765433221 1222333333 45666666654 34666664
No 163
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=93.46 E-value=1.9 Score=44.25 Aligned_cols=143 Identities=17% Similarity=0.258 Sum_probs=77.1
Q ss_pred CCEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEe
Q 007704 404 DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKI 482 (592)
Q Consensus 404 ~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i 482 (592)
+++.++.|+.+ ..+.+||..+.+-...-.- ....-.+++.. ++..++.|+.+ ..+.+||+.++.....
T Consensus 134 dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~~ 202 (393)
T 1erj_A 134 DGKFLATGAED-----RLIRIWDIENRKIVMILQG-HEQDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRTGQCSLT 202 (393)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcEEEEEcc-CCCCEEEEEEcCCCCEEEEecCC-----CcEEEEECCCCeeEEE
Confidence 67888888755 4688999988764332111 11111122222 45566667655 4688899988765433
Q ss_pred ccCCCCCceeEEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCeEEE-cCCCC-----CCCcceEEEEE-CCEEEEEec
Q 007704 483 ANMNRRRGCHSLAVL--NGKLYALGGFDGSAMVPSIEVYDPRLGSWMS-GEPMK-----LSRGYLGAAVV-KEAIYVIGG 553 (592)
Q Consensus 483 ~~~p~~R~~~s~v~~--~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~-v~~lp-----~~R~~~s~~v~-~~~Iyv~GG 553 (592)
-.... ...+++.. ++.+++.|+.++ .+.+||..+..-.. +.... ....-.+++.. ++..++.|+
T Consensus 203 ~~~~~--~v~~~~~~~~~~~~l~~~s~d~-----~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s 275 (393)
T 1erj_A 203 LSIED--GVTTVAVSPGDGKYIAAGSLDR-----AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS 275 (393)
T ss_dssp EECSS--CEEEEEECSTTCCEEEEEETTS-----CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEcCC--CcEEEEEECCCCCEEEEEcCCC-----cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEe
Confidence 22211 12222222 677888888764 47889988765433 21110 11111222222 566777777
Q ss_pred ccCCCccccEEEEEcCC
Q 007704 554 VKNGSEIVDTVERFKEG 570 (592)
Q Consensus 554 ~~~~~~~~~~v~~Yd~~ 570 (592)
.+ ..|.+||..
T Consensus 276 ~d------~~v~~wd~~ 286 (393)
T 1erj_A 276 LD------RSVKLWNLQ 286 (393)
T ss_dssp TT------SEEEEEEC-
T ss_pred CC------CEEEEEECC
Confidence 54 347777764
No 164
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=93.39 E-value=3.2 Score=41.38 Aligned_cols=185 Identities=11% Similarity=0.004 Sum_probs=92.6
Q ss_pred ECCEEEEEeeCCCCCCcceEEEEECCCCeEEE-C-----CCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCC
Q 007704 356 LNGELYIFGGGDGNSWHNTVESYSPANDEWTS-R-----PSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDI 429 (592)
Q Consensus 356 ~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~-l-----~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t 429 (592)
.++.+++.||.++ .+..||..+++-.. + ..+..... ...+..++.|.+.-. ...+.+||..+
T Consensus 46 ~d~~~l~sg~~Dg-----~v~iwd~~~~~~~~~~~~~~v~~~~~~~~-~~s~s~D~~i~~w~~------~~~~~~~~~~~ 113 (343)
T 3lrv_A 46 YDKWVCMCRCEDG-----ALHFTQLKDSKTITTITTPNPRTGGEHPA-IISRGPCNRLLLLYP------GNQITILDSKT 113 (343)
T ss_dssp EEEEEEEEEEETT-----EEEEEEESSSSCEEEEEEECCCTTCCCCS-EEEECSTTEEEEEET------TTEEEEEETTT
T ss_pred CCCCEEEEECCCC-----cEEEEECCCCcEEEEEecCCceeeeeCCc-eEEecCCCeEEEEEc------cCceEEeecCC
Confidence 3667788888663 57777776654211 1 11110001 222233455555432 23566778777
Q ss_pred CeEEEcccccCcccceEEEEE---CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCEEEEEe
Q 007704 430 GKWIRTRSMLQKRFALAAAEL---NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGKLYALG 505 (592)
Q Consensus 430 ~~W~~i~~~p~~R~~~~a~~~---~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~G 505 (592)
.+-...-.......-.+++.. ++.+++.|+.+ ..+.+||+.++.-..+..........+++.. ++.+++.|
T Consensus 114 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~d-----g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg 188 (343)
T 3lrv_A 114 NKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNR-----GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALY 188 (343)
T ss_dssp CCEEEEEECCCSSCEEEEECCC---CCEEEEEETT-----CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEE
T ss_pred cceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCC-----CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEE
Confidence 652221111111111112211 56677778765 3578899988776444322222122233333 78888888
Q ss_pred cCCCCCCCCeEEEEeCCCCeEE--EcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 506 GFDGSAMVPSIEVYDPRLGSWM--SGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 506 G~~~~~~~~~v~~yD~~t~~W~--~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+.++ .+.+||..+..-. .+.. .+...-.+++.. ++..++.|+ + +.|.+||..
T Consensus 189 ~~dg-----~i~iwd~~~~~~~~~~~~~-~h~~~v~~l~fs~~g~~l~s~~-~------~~v~iwd~~ 243 (343)
T 3lrv_A 189 SPDG-----ILDVYNLSSPDQASSRFPV-DEEAKIKEVKFADNGYWMVVEC-D------QTVVCFDLR 243 (343)
T ss_dssp CTTS-----CEEEEESSCTTSCCEECCC-CTTSCEEEEEECTTSSEEEEEE-S------SBEEEEETT
T ss_pred cCCC-----EEEEEECCCCCCCccEEec-cCCCCEEEEEEeCCCCEEEEEe-C------CeEEEEEcC
Confidence 8664 5889998876432 2221 111112222222 456666666 2 248888865
No 165
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=93.38 E-value=4.9 Score=40.09 Aligned_cols=142 Identities=14% Similarity=0.023 Sum_probs=78.3
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEE-EECCEEEEEecCCCCcccceEEEEeCCCCeEEEc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGA-TIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRT 435 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~-~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i 435 (592)
++.+|+++... ..+++||+.+++..... .+. .-.+++ .-++++|+... ..+++||+.+++++.+
T Consensus 60 ~~~l~~~d~~~-----~~i~~~d~~~~~~~~~~-~~~--~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 60 SGTAWWFNILE-----RELHELHLASGRKTVHA-LPF--MGSALAKISDSKQLIASD-------DGLFLRDTATGVLTLH 124 (326)
T ss_dssp TTEEEEEEGGG-----TEEEEEETTTTEEEEEE-CSS--CEEEEEEEETTEEEEEET-------TEEEEEETTTCCEEEE
T ss_pred CCEEEEEECCC-----CEEEEEECCCCcEEEEE-CCC--cceEEEEeCCCeEEEEEC-------CCEEEEECCCCcEEEE
Confidence 36788876532 46999999988765542 221 122222 34788887642 3599999999988766
Q ss_pred ccccCc--ccceEEEEE--CCEEEEEecc-CCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CC-EEEEEecCC
Q 007704 436 RSMLQK--RFALAAAEL--NGVLYATGGY-DGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NG-KLYALGGFD 508 (592)
Q Consensus 436 ~~~p~~--R~~~~a~~~--~g~IYV~GG~-~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~-~Lyv~GG~~ 508 (592)
...+.. ........+ +|++|+.... ........+++|| ++....+..- ......++.- ++ .||+....
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~--~~~~~~i~~s~dg~~lyv~~~~- 199 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFAD--ISIPNSICFSPDGTTGYFVDTK- 199 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEE--ESSEEEEEECTTSCEEEEEETT-
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCC--CcccCCeEEcCCCCEEEEEECC-
Confidence 433221 111122222 6778774321 1112345789998 5666554211 0111223322 44 57776432
Q ss_pred CCCCCCeEEEEeCC
Q 007704 509 GSAMVPSIEVYDPR 522 (592)
Q Consensus 509 ~~~~~~~v~~yD~~ 522 (592)
...+++||..
T Consensus 200 ----~~~I~~~d~~ 209 (326)
T 2ghs_A 200 ----VNRLMRVPLD 209 (326)
T ss_dssp ----TCEEEEEEBC
T ss_pred ----CCEEEEEEcc
Confidence 2578999875
No 166
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=93.37 E-value=2.8 Score=44.96 Aligned_cols=186 Identities=15% Similarity=0.175 Sum_probs=96.5
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCE-EEEEecCCCCcccceEEEEeCCCCeEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNK-IFAIGGGNGLECFSDVEMLDLDIGKWI 433 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~-Iyv~GG~~~~~~~~~v~~yD~~t~~W~ 433 (592)
+++.++.||.+... ...++.||.. ..-..+. ........+.+ ++. +++.|+.+ ..+.+||..+.+-.
T Consensus 127 ~~~~l~~~~~~~~~-~~~v~~~d~~-~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~d-----~~v~vwd~~~~~~~ 196 (615)
T 1pgu_A 127 EGRRLCVVGEGRDN-FGVFISWDSG-NSLGEVS---GHSQRINACHLKQSRPMRSMTVGDD-----GSVVFYQGPPFKFS 196 (615)
T ss_dssp TSSEEEEEECCSSC-SEEEEETTTC-CEEEECC---SCSSCEEEEEECSSSSCEEEEEETT-----TEEEEEETTTBEEE
T ss_pred CCCEEEEeccCCCC-ccEEEEEECC-Ccceeee---cCCccEEEEEECCCCCcEEEEEeCC-----CcEEEEeCCCccee
Confidence 56667777754322 3467777732 2222222 22222222333 443 77777654 47888998776543
Q ss_pred EcccccCcc----cceEEEEE-C-CEEEEEeccCCCCCCCeeEEEeCCCCeEEEec-cC--CCCCceeEEEEECCEEEEE
Q 007704 434 RTRSMLQKR----FALAAAEL-N-GVLYATGGYDGNEYMNSAERFDPREHYWTKIA-NM--NRRRGCHSLAVLNGKLYAL 504 (592)
Q Consensus 434 ~i~~~p~~R----~~~~a~~~-~-g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~-~~--p~~R~~~s~v~~~~~Lyv~ 504 (592)
. .+.... .-.+++.. + +..++.|+.+ ..+.+||+.+......- .. .......++...++..++.
T Consensus 197 ~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ 269 (615)
T 1pgu_A 197 A--SDRTHHKQGSFVRDVEFSPDSGEFVITVGSD-----RKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFAT 269 (615)
T ss_dssp E--EECSSSCTTCCEEEEEECSTTCCEEEEEETT-----CCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEE
T ss_pred e--eecccCCCCceEEEEEECCCCCCEEEEEeCC-----CeEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEE
Confidence 2 222111 11222222 4 6777777765 46889999887654332 20 1111112222227778888
Q ss_pred ecCCCCCCCCeEEEEeCCCCeEEEcCCCC-C--CCcceEEEEECCEEEEEecccCCCccccEEEEEcCC
Q 007704 505 GGFDGSAMVPSIEVYDPRLGSWMSGEPMK-L--SRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 505 GG~~~~~~~~~v~~yD~~t~~W~~v~~lp-~--~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
|+.+ ..+.+||..+......-..+ . .....++...++..++.|+.++ .+.+||..
T Consensus 270 ~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g------~i~~~d~~ 327 (615)
T 1pgu_A 270 VGAD-----ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDG------TLNFYELG 327 (615)
T ss_dssp EETT-----SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTS------CEEEEETT
T ss_pred EcCC-----CcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCC------CEEEEECC
Confidence 8765 36889999877654432221 1 1122233333666667777653 48888875
No 167
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=93.30 E-value=1.9 Score=42.38 Aligned_cols=175 Identities=11% Similarity=0.085 Sum_probs=88.6
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCe----EEECCCCCCCCcceEEE-EECCE-EEEEecCCCCcccceEEEEeC-CC
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDE----WTSRPSLNGTKGSLAGA-TIDNK-IFAIGGGNGLECFSDVEMLDL-DI 429 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~----W~~l~~lp~~r~~~~~~-~~~~~-Iyv~GG~~~~~~~~~v~~yD~-~t 429 (592)
++.+++.|+.+ ..+..||..+.. ...+. .....-.+++ .-+++ .++.|+.+ ..+.+||+ .+
T Consensus 22 ~~~~l~~~~~d-----~~v~iw~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~ 89 (342)
T 1yfq_A 22 SKSLLLITSWD-----GSLTVYKFDIQAKNVDLLQSL--RYKHPLLCCNFIDNTDLQIYVGTVQ-----GEILKVDLIGS 89 (342)
T ss_dssp GGTEEEEEETT-----SEEEEEEEETTTTEEEEEEEE--ECSSCEEEEEEEESSSEEEEEEETT-----SCEEEECSSSS
T ss_pred CCCEEEEEcCC-----CeEEEEEeCCCCccccceeee--ecCCceEEEEECCCCCcEEEEEcCC-----CeEEEEEeccC
Confidence 56677777765 357777776655 33222 1111222222 23677 77777754 47889999 88
Q ss_pred CeEEEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCC---e----EEEeccCCCCCceeEEEEECCEEE
Q 007704 430 GKWIRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREH---Y----WTKIANMNRRRGCHSLAVLNGKLY 502 (592)
Q Consensus 430 ~~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~---~----W~~i~~~p~~R~~~s~v~~~~~Ly 502 (592)
++...+...+....-.+++...+.+++.|+.+ ..+.+||+.+. . .+.+..........++....+. +
T Consensus 90 ~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-l 163 (342)
T 1yfq_A 90 PSFQALTNNEANLGICRICKYGDDKLIAASWD-----GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR-L 163 (342)
T ss_dssp SSEEECBSCCCCSCEEEEEEETTTEEEEEETT-----SEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE-E
T ss_pred CceEeccccCCCCceEEEEeCCCCEEEEEcCC-----CeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc-E
Confidence 87655544111122223333335566666654 45777876640 0 2222222322223334434555 6
Q ss_pred EEecCCCCCCCCeEEEEeCCC-Ce--EEEcCCCCCCCcceEEEEE--CCEEEEEeccc
Q 007704 503 ALGGFDGSAMVPSIEVYDPRL-GS--WMSGEPMKLSRGYLGAAVV--KEAIYVIGGVK 555 (592)
Q Consensus 503 v~GG~~~~~~~~~v~~yD~~t-~~--W~~v~~lp~~R~~~s~~v~--~~~Iyv~GG~~ 555 (592)
+.|+.+ ..+.+||..+ .. ...... +......+++.. ++..++.|+.+
T Consensus 164 ~~~~~d-----~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~l~~~~~d 215 (342)
T 1yfq_A 164 IVGMNN-----SQVQWFRLPLCEDDNGTIEES-GLKYQIRDVALLPKEQEGYACSSID 215 (342)
T ss_dssp EEEEST-----TEEEEEESSCCTTCCCEEEEC-SCSSCEEEEEECSGGGCEEEEEETT
T ss_pred EEEeCC-----CeEEEEECCccccccceeeec-CCCCceeEEEECCCCCCEEEEEecC
Confidence 666644 3688999877 32 222211 112222233333 45677777754
No 168
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=93.25 E-value=6.9 Score=38.52 Aligned_cols=197 Identities=12% Similarity=0.034 Sum_probs=104.8
Q ss_pred ceEEEEE-CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE-CCEEEEEecCCCCcccceEEEEeC
Q 007704 350 YASAAML-NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI-DNKIFAIGGGNGLECFSDVEMLDL 427 (592)
Q Consensus 350 ~~s~v~~-~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~v~~yD~ 427 (592)
-..++.. ++.||+.--. ...+++||+....-... ..+ ..-+.++.. ++++||...... ...++.||+
T Consensus 34 pegia~~~~g~lyv~d~~-----~~~I~~~d~~g~~~~~~-~~~--~~p~gia~~~dG~l~vad~~~~---~~~v~~~d~ 102 (306)
T 2p4o_A 34 LENLASAPDGTIFVTNHE-----VGEIVSITPDGNQQIHA-TVE--GKVSGLAFTSNGDLVATGWNAD---SIPVVSLVK 102 (306)
T ss_dssp EEEEEECTTSCEEEEETT-----TTEEEEECTTCCEEEEE-ECS--SEEEEEEECTTSCEEEEEECTT---SCEEEEEEC
T ss_pred cceEEECCCCCEEEEeCC-----CCeEEEECCCCceEEEE-eCC--CCceeEEEcCCCcEEEEeccCC---cceEEEEcC
Confidence 3344443 6778887532 24689999887532221 111 122333333 678988764211 125888999
Q ss_pred CCCeEEEcccccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCe---EEEecc----CCCC--CceeEEEEE
Q 007704 428 DIGKWIRTRSMLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHY---WTKIAN----MNRR--RGCHSLAVL 497 (592)
Q Consensus 428 ~t~~W~~i~~~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~---W~~i~~----~p~~--R~~~s~v~~ 497 (592)
.+++.+.+...+..+.....+.. ++.+|+... ....++++|+.+.. |..-+. .+.. .....+..-
T Consensus 103 ~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~-----~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~d 177 (306)
T 2p4o_A 103 SDGTVETLLTLPDAIFLNGITPLSDTQYLTADS-----YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRF 177 (306)
T ss_dssp TTSCEEEEEECTTCSCEEEEEESSSSEEEEEET-----TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEE
T ss_pred CCCeEEEEEeCCCccccCcccccCCCcEEEEEC-----CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcC
Confidence 88888776655554544444433 556777542 12478999998652 322111 1111 122233223
Q ss_pred CCEEEEEecCCCCCCCCeEEEEeCCC-CeE---EEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCCCc
Q 007704 498 NGKLYALGGFDGSAMVPSIEVYDPRL-GSW---MSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEGQG 572 (592)
Q Consensus 498 ~~~Lyv~GG~~~~~~~~~v~~yD~~t-~~W---~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~~~ 572 (592)
++.||+.-- ..+.|++||+.. .+. +.+.....| ..+++- ++.+||.-... +.|.+||++.+
T Consensus 178 g~~lyv~d~-----~~~~I~~~~~~~~g~~~~~~~~~~~~~P---~gi~vd~dG~l~va~~~~------~~V~~~~~~G~ 243 (306)
T 2p4o_A 178 GNFLYVSNT-----EKMLLLRIPVDSTDKPGEPEIFVEQTNI---DDFAFDVEGNLYGATHIY------NSVVRIAPDRS 243 (306)
T ss_dssp TTEEEEEET-----TTTEEEEEEBCTTSCBCCCEEEEESCCC---SSEEEBTTCCEEEECBTT------CCEEEECTTCC
T ss_pred CCEEEEEeC-----CCCEEEEEEeCCCCCCCccEEEeccCCC---CCeEECCCCCEEEEeCCC------CeEEEECCCCC
Confidence 568888753 235799999864 221 111112122 223333 56788765432 45889998744
Q ss_pred EEEc
Q 007704 573 WEEI 576 (592)
Q Consensus 573 W~~v 576 (592)
...+
T Consensus 244 ~~~~ 247 (306)
T 2p4o_A 244 TTII 247 (306)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4433
No 169
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=93.17 E-value=4.7 Score=39.61 Aligned_cols=65 Identities=9% Similarity=0.177 Sum_probs=39.8
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEEC-CCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCe
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSR-PSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGK 431 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l-~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~ 431 (592)
++.+++.|+.+ ..+..||..+.+.... ..+.........+.+ +++.++.|+.+ ..+.+||+.+.+
T Consensus 127 ~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~ 194 (366)
T 3k26_A 127 DPNLLLSVSKD-----HALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD-----HSLKLWRINSKR 194 (366)
T ss_dssp CTTEEEEEETT-----SCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESCSHH
T ss_pred CCCEEEEEeCC-----CeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCC-----CCEEEEECCCCc
Confidence 56788888865 3588999988765433 222222222333333 56777777754 367888887653
No 170
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=93.17 E-value=4 Score=40.09 Aligned_cols=143 Identities=7% Similarity=0.038 Sum_probs=76.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEE---ECCEEEEEecCCCCcccceEEEEeCCCCeEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGAT---IDNKIFAIGGGNGLECFSDVEMLDLDIGKWI 433 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~---~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~ 433 (592)
++..++.|+.+ ..+..||..+.+...+.....+ -.+++. -++++++.|+.+ ..+.+||+.+.+-.
T Consensus 97 ~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~ 164 (368)
T 3mmy_A 97 DGSKVFTASCD-----KTAKMWDLSSNQAIQIAQHDAP--VKTIHWIKAPNYSCVMTGSWD-----KTLKFWDTRSSNPM 164 (368)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEECSSC--EEEEEEEECSSCEEEEEEETT-----SEEEEECSSCSSCS
T ss_pred CCCEEEEEcCC-----CcEEEEEcCCCCceeeccccCc--eEEEEEEeCCCCCEEEEccCC-----CcEEEEECCCCcEE
Confidence 56677777765 3688999998876654222111 122222 367788888755 46889998776422
Q ss_pred EcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCe--EEEeccCCCCCceeEEEEEC----CEEEEEecC
Q 007704 434 RTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHY--WTKIANMNRRRGCHSLAVLN----GKLYALGGF 507 (592)
Q Consensus 434 ~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~--W~~i~~~p~~R~~~s~v~~~----~~Lyv~GG~ 507 (592)
. .+.......+.......+++.++ + ..+.+||..... +..+............+..+ ...++.|+.
T Consensus 165 ~--~~~~~~~~~~~~~~~~~~~~~~~-~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (368)
T 3mmy_A 165 M--VLQLPERCYCADVIYPMAVVATA-E-----RGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSI 236 (368)
T ss_dssp E--EEECSSCEEEEEEETTEEEEEEG-G-----GCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEET
T ss_pred E--EEecCCCceEEEecCCeeEEEeC-C-----CcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecC
Confidence 1 22222233344445665555443 2 357788877653 33333222222222222222 233667765
Q ss_pred CCCCCCCeEEEEeCCCC
Q 007704 508 DGSAMVPSIEVYDPRLG 524 (592)
Q Consensus 508 ~~~~~~~~v~~yD~~t~ 524 (592)
+ ..+.+||....
T Consensus 237 d-----g~i~i~~~~~~ 248 (368)
T 3mmy_A 237 E-----GRVAIHYINPP 248 (368)
T ss_dssp T-----SEEEEEESSCS
T ss_pred C-----CcEEEEecCCC
Confidence 4 35777887664
No 171
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=93.16 E-value=5.1 Score=39.66 Aligned_cols=197 Identities=7% Similarity=-0.076 Sum_probs=104.0
Q ss_pred eEEEEE--CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCC---CcceEEEEE--CCEEEEEecCCC--------
Q 007704 351 ASAAML--NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGT---KGSLAGATI--DNKIFAIGGGNG-------- 415 (592)
Q Consensus 351 ~s~v~~--~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~---r~~~~~~~~--~~~Iyv~GG~~~-------- 415 (592)
++++.. ++.|||.-.. ..+++||+.++..+.+...... ..-..+++. ++.||+.-....
T Consensus 83 ~gi~~~~~~g~l~v~d~~------~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~ 156 (322)
T 2fp8_A 83 YDISYNLQNNQLYIVDCY------YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQ 156 (322)
T ss_dssp EEEEEETTTTEEEEEETT------TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHH
T ss_pred ceEEEcCCCCcEEEEECC------CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccce
Confidence 345554 5789987432 2388999887765554321111 111233332 578998743211
Q ss_pred ----CcccceEEEEeCCCCeEEEcc-cccCcccceEEEEE-C-CEEEEEeccCCCCCCCeeEEEeCCC---CeEEEeccC
Q 007704 416 ----LECFSDVEMLDLDIGKWIRTR-SMLQKRFALAAAEL-N-GVLYATGGYDGNEYMNSAERFDPRE---HYWTKIANM 485 (592)
Q Consensus 416 ----~~~~~~v~~yD~~t~~W~~i~-~~p~~R~~~~a~~~-~-g~IYV~GG~~~~~~~~~v~~yD~~t---~~W~~i~~~ 485 (592)
......+++||+.+++.+.+. .+..+ ...+.. + +.|||.-.. ...+++||+.. ..++.+..+
T Consensus 157 ~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p---~gia~~~dg~~lyv~d~~-----~~~I~~~~~~~~~~~~~~~~~~~ 228 (322)
T 2fp8_A 157 IMDTSDKTGRLIKYDPSTKETTLLLKELHVP---GGAEVSADSSFVLVAEFL-----SHQIVKYWLEGPKKGTAEVLVKI 228 (322)
T ss_dssp HHHHTCCCEEEEEEETTTTEEEEEEEEESCC---CEEEECTTSSEEEEEEGG-----GTEEEEEESSSTTTTCEEEEEEC
T ss_pred ehcccCCCceEEEEeCCCCEEEEeccCCccC---cceEECCCCCEEEEEeCC-----CCeEEEEECCCCcCCccceEEeC
Confidence 012256999999988765442 12111 223333 3 358887432 25789999875 344444333
Q ss_pred CCCCceeEEEEE-CCEEEEEecCCCC-----CCCCeEEEEeCCCCeEEEcCCCC-C-CCcceEEEEECCEEEEEecccCC
Q 007704 486 NRRRGCHSLAVL-NGKLYALGGFDGS-----AMVPSIEVYDPRLGSWMSGEPMK-L-SRGYLGAAVVKEAIYVIGGVKNG 557 (592)
Q Consensus 486 p~~R~~~s~v~~-~~~Lyv~GG~~~~-----~~~~~v~~yD~~t~~W~~v~~lp-~-~R~~~s~~v~~~~Iyv~GG~~~~ 557 (592)
+. -..++.- ++.|||....... .....+.+||+.......+.... . .....+++.-++.|||.+...
T Consensus 229 ~g---P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~-- 303 (322)
T 2fp8_A 229 PN---PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFH-- 303 (322)
T ss_dssp SS---EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSC--
T ss_pred CC---CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCC--
Confidence 22 2223332 6778887532100 01245889999755444443211 0 122234445688999865432
Q ss_pred CccccEEEEEcCC
Q 007704 558 SEIVDTVERFKEG 570 (592)
Q Consensus 558 ~~~~~~v~~Yd~~ 570 (592)
+.|.+|++.
T Consensus 304 ----~~i~~~~~~ 312 (322)
T 2fp8_A 304 ----GSVGILVYD 312 (322)
T ss_dssp ----SEEEEEEC-
T ss_pred ----CceEEEecc
Confidence 568888875
No 172
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=93.15 E-value=3 Score=42.40 Aligned_cols=184 Identities=16% Similarity=0.179 Sum_probs=94.8
Q ss_pred EEEEEeeCCCCCCcceEEEEECCCCeEEECC--CCCCCC-cceEEEEE---CCEEEEEecCCCCcccceEEEEeCCCCe-
Q 007704 359 ELYIFGGGDGNSWHNTVESYSPANDEWTSRP--SLNGTK-GSLAGATI---DNKIFAIGGGNGLECFSDVEMLDLDIGK- 431 (592)
Q Consensus 359 ~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~--~lp~~r-~~~~~~~~---~~~Iyv~GG~~~~~~~~~v~~yD~~t~~- 431 (592)
..++.|+.+ ..+..||..+++-...- ..+... .....+.+ ++.+++.|+.++ .+.+||+....
T Consensus 171 ~~l~s~s~D-----~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~-----~v~~wd~~~~~~ 240 (380)
T 3iz6_a 171 TRLITGSGD-----QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT-----TVRLWDLRITSR 240 (380)
T ss_dssp SCEEEECTT-----SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS-----CEEEEETTTTCC
T ss_pred CEEEEECCC-----CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC-----eEEEEECCCCCc
Confidence 345555544 35788898887654321 122111 11122222 678888888663 67888876321
Q ss_pred -EEEcccccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccC-CC----CCceeEEEEE--CCEEE
Q 007704 432 -WIRTRSMLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANM-NR----RRGCHSLAVL--NGKLY 502 (592)
Q Consensus 432 -W~~i~~~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~-p~----~R~~~s~v~~--~~~Ly 502 (592)
-...... ...-.+++.. ++..++.|+.+ ..+.+||+.++.-...-.. +. .......+.+ ++.++
T Consensus 241 ~~~~~~~h--~~~v~~v~~~p~~~~l~s~s~D-----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 313 (380)
T 3iz6_a 241 AVRTYHGH--EGDINSVKFFPDGQRFGTGSDD-----GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLL 313 (380)
T ss_dssp CCEEECCC--SSCCCEEEECTTSSEEEEECSS-----SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEE
T ss_pred ceEEECCc--CCCeEEEEEecCCCeEEEEcCC-----CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEE
Confidence 1111110 0011122222 56777888766 3578899988764433111 11 1111122333 67777
Q ss_pred EEecCCCCCCCCeEEEEeCCCCeEE-EcCCCCCC--CcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 503 ALGGFDGSAMVPSIEVYDPRLGSWM-SGEPMKLS--RGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 503 v~GG~~~~~~~~~v~~yD~~t~~W~-~v~~lp~~--R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+.|+.++ .+.+||..+.... .+..+... ..-.+++.. ++..++.||.++. |.+|+..
T Consensus 314 ~~g~~dg-----~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~------i~iW~~~ 374 (380)
T 3iz6_a 314 FAGYSNG-----DCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKN------LKIWAFS 374 (380)
T ss_dssp EEECTTS-----CEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSC------EEEEECC
T ss_pred EEEECCC-----CEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCC------EEEEecC
Confidence 7777553 5889998776543 23332221 111222222 6778888887543 7777764
No 173
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=93.14 E-value=6.9 Score=38.22 Aligned_cols=199 Identities=10% Similarity=0.060 Sum_probs=102.9
Q ss_pred ECCEEEEEeeCCCCCCcceEEEEECCCC--eEEECCCCCCCCcceEEEE-ECCEEEEEecCCCCcccceEEEEeCCCC-e
Q 007704 356 LNGELYIFGGGDGNSWHNTVESYSPAND--EWTSRPSLNGTKGSLAGAT-IDNKIFAIGGGNGLECFSDVEMLDLDIG-K 431 (592)
Q Consensus 356 ~~~~Iyv~GG~~~~~~~~~v~~yd~~t~--~W~~l~~lp~~r~~~~~~~-~~~~Iyv~GG~~~~~~~~~v~~yD~~t~-~ 431 (592)
-+++||+.+. +.++.||+ ++ .|+--. +.....+++.. .++++++..+.+ ...++.+|+... .
T Consensus 46 pdG~ilvs~~-------~~V~~~d~-~G~~~W~~~~--~~~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~Gk~l 111 (276)
T 3no2_A 46 KAGEILFSYS-------KGAKMITR-DGRELWNIAA--PAGCEMQTARILPDGNALVAWCGH----PSTILEVNMKGEVL 111 (276)
T ss_dssp TTSCEEEECB-------SEEEEECT-TSCEEEEEEC--CTTCEEEEEEECTTSCEEEEEEST----TEEEEEECTTSCEE
T ss_pred CCCCEEEeCC-------CCEEEECC-CCCEEEEEcC--CCCccccccEECCCCCEEEEecCC----CCEEEEEeCCCCEE
Confidence 4788888332 45999999 44 465432 11112233333 377777775431 246788888543 2
Q ss_pred EEEc-c-cccC--cccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCC-eEEEeccCCCCCceeEEEEE-CCEEEEEe
Q 007704 432 WIRT-R-SMLQ--KRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREH-YWTKIANMNRRRGCHSLAVL-NGKLYALG 505 (592)
Q Consensus 432 W~~i-~-~~p~--~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~-~W~~i~~~p~~R~~~s~v~~-~~~Lyv~G 505 (592)
|+.. . .... ..........++.+++....+ ..+..||++.. .|+.-.+ .. .+++... ++.+++.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~-----~~v~~~d~~G~~~w~~~~~-~~---~~~~~~~~~g~~~v~~ 182 (276)
T 3no2_A 112 SKTEFETGIERPHAQFRQINKNKKGNYLVPLFAT-----SEVREIAPNGQLLNSVKLS-GT---PFSSAFLDNGDCLVAC 182 (276)
T ss_dssp EEEEECCSCSSGGGSCSCCEECTTSCEEEEETTT-----TEEEEECTTSCEEEEEECS-SC---CCEEEECTTSCEEEEC
T ss_pred EEEeccCCCCcccccccCceECCCCCEEEEecCC-----CEEEEECCCCCEEEEEECC-CC---ccceeEcCCCCEEEEe
Confidence 4322 1 1111 111122333466666654322 56899999833 2665432 11 2234444 77888876
Q ss_pred cCCCCCCCCeEEEEeCCCC--eEEEcC-CCCCCCcc--eEEEEE-CCEEEEEe--cccCCC-c-cccEEEEEcCC--CcE
Q 007704 506 GFDGSAMVPSIEVYDPRLG--SWMSGE-PMKLSRGY--LGAAVV-KEAIYVIG--GVKNGS-E-IVDTVERFKEG--QGW 573 (592)
Q Consensus 506 G~~~~~~~~~v~~yD~~t~--~W~~v~-~lp~~R~~--~s~~v~-~~~Iyv~G--G~~~~~-~-~~~~v~~Yd~~--~~W 573 (592)
..+ ..+..+|+.+. .|+.-. .++..|.. .+++.. ++.+||.. |..... . -...+..+|++ -.|
T Consensus 183 ~~~-----~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W 257 (276)
T 3no2_A 183 GDA-----HCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVW 257 (276)
T ss_dssp BTT-----SEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEE
T ss_pred CCC-----CeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEE
Confidence 642 35899999865 476643 23322322 233333 78888876 432100 0 01235556666 457
Q ss_pred EEccccCCC
Q 007704 574 EEINSRAIG 582 (592)
Q Consensus 574 ~~v~~~p~~ 582 (592)
+--...-++
T Consensus 258 ~~~~~~~~~ 266 (276)
T 3no2_A 258 QLNDKVKFG 266 (276)
T ss_dssp EECCTTTSC
T ss_pred EecCccccc
Confidence 765444444
No 174
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=93.12 E-value=1.2 Score=49.77 Aligned_cols=202 Identities=8% Similarity=-0.069 Sum_probs=99.6
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCC---eEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPAND---EWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWI 433 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~---~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~ 433 (592)
+++.+++++. ..++.+|..++ ....+..... .......+-+|+.++++.. ..++++|+.+++..
T Consensus 119 Dg~~l~~~~~------~~i~~~d~~~~~~~~~~~l~~~~~-~~~~~~~SPDG~~la~~~~------~~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 119 DAQRLLFPLG------GELYLYDLKQEGKAAVRQLTHGEG-FATDAKLSPKGGFVSFIRG------RNLWVIDLASGRQM 185 (741)
T ss_dssp TSSEEEEEET------TEEEEEESSSCSTTSCCBCCCSSS-CEEEEEECTTSSEEEEEET------TEEEEEETTTTEEE
T ss_pred CCCEEEEEeC------CcEEEEECCCCCcceEEEcccCCc-ccccccCCCCCCEEEEEeC------CcEEEEecCCCCEE
Confidence 5555556553 67999999887 5444332211 1111222236776666542 37999999998877
Q ss_pred EcccccCccc---------------ceEEEE-ECCEEEEEeccCCCC----------------------------CCCee
Q 007704 434 RTRSMLQKRF---------------ALAAAE-LNGVLYATGGYDGNE----------------------------YMNSA 469 (592)
Q Consensus 434 ~i~~~p~~R~---------------~~~a~~-~~g~IYV~GG~~~~~----------------------------~~~~v 469 (592)
.+........ ....+. -+++.++++..++.. ....+
T Consensus 186 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l 265 (741)
T 2ecf_A 186 QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKL 265 (741)
T ss_dssp ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEE
T ss_pred EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEE
Confidence 6643221100 011122 145544444333210 12278
Q ss_pred EEEeCCC-CeEEEeccC-CCCCc-eeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCC---cceEEEE
Q 007704 470 ERFDPRE-HYWTKIANM-NRRRG-CHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSR---GYLGAAV 543 (592)
Q Consensus 470 ~~yD~~t-~~W~~i~~~-p~~R~-~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R---~~~s~~v 543 (592)
+++|+.+ +.-..+... ..... ..... -+++.++++..+......+++.+|+.+...+.+-...... ....++.
T Consensus 266 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 344 (741)
T 2ecf_A 266 GVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRF 344 (741)
T ss_dssp EEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEE
T ss_pred EEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEE
Confidence 8899888 765544322 11111 11222 4444444443322233467999999998876653211110 0012222
Q ss_pred -ECCEEEEEecccCCCccccEEEEEcCCCcEEEc
Q 007704 544 -VKEAIYVIGGVKNGSEIVDTVERFKEGQGWEEI 576 (592)
Q Consensus 544 -~~~~Iyv~GG~~~~~~~~~~v~~Yd~~~~W~~v 576 (592)
-++++++.++.++ ...+|.+|....+..+
T Consensus 345 spdg~~~~~~~~~g----~~~l~~~~~~~~~~~l 374 (741)
T 2ecf_A 345 LDDGSILWSSERTG----FQHLYRIDSKGKAAAL 374 (741)
T ss_dssp CTTSCEEEEECTTS----SCEEEEECSSSCEEES
T ss_pred CCCCeEEEEecCCC----ccEEEEEcCCCCeeee
Confidence 2566555554332 2568888765224444
No 175
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=93.02 E-value=2.1 Score=42.41 Aligned_cols=190 Identities=9% Similarity=-0.056 Sum_probs=96.6
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCC------------------CC
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGN------------------GL 416 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~------------------~~ 416 (592)
+++.+++....+......+|.+|..+++...+...+. .....+ +++.++++... +.
T Consensus 69 Dg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~----~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~ 144 (347)
T 2gop_A 69 DGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN----IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDL 144 (347)
T ss_dssp TSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE----EEEEEECTTSSEEEEEEECCCC---------CCCC----
T ss_pred CCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC----ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCc
Confidence 5554444443321223569999999888776643332 222233 56544444311 00
Q ss_pred ----cccceEEEEeCCCCeE-EEcccccCcccceEEEEECCEEEEEeccCCCC---C-CCeeEEEeCCCCeEEEeccCCC
Q 007704 417 ----ECFSDVEMLDLDIGKW-IRTRSMLQKRFALAAAELNGVLYATGGYDGNE---Y-MNSAERFDPREHYWTKIANMNR 487 (592)
Q Consensus 417 ----~~~~~v~~yD~~t~~W-~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~---~-~~~v~~yD~~t~~W~~i~~~p~ 487 (592)
.....++++|+.+++. +.+.. + .....+...+.+++.+..+... . ...++.+| ++.+..+..-
T Consensus 145 ~~~~~~~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-- 216 (347)
T 2gop_A 145 GFFDGEKTTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-- 216 (347)
T ss_dssp -----CEEEEEEEETTTTEEEEEEEE-E---TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE--
T ss_pred ccccCccceEEEEECCCCeEEeeecC-C---CcccccCCCCeEEEEEecccccccccccccEEEeC--CCceEEeccC--
Confidence 1135799999999887 55544 2 2233333433355555443221 2 45788888 7777776432
Q ss_pred CCceeEEEEECCEEEEEecCCCC---CCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEE
Q 007704 488 RRGCHSLAVLNGKLYALGGFDGS---AMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTV 564 (592)
Q Consensus 488 ~R~~~s~v~~~~~Lyv~GG~~~~---~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v 564 (592)
. ......-+++.+++++.... .....++.+| +..++.+..-. ...........+.+|+.+...+ ...+
T Consensus 217 -~-~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~-~~~~~~~~~~sdg~~~~~~~~~----~~~l 287 (347)
T 2gop_A 217 -V-SFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEV-DRGVGQAKIKDGKVYFTLFEEG----SVNL 287 (347)
T ss_dssp -E-SEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTC-CSEEEEEEEETTEEEEEEEETT----EEEE
T ss_pred -c-ceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccC-CcccCCccEEcCcEEEEEecCC----cEEE
Confidence 1 12222446654444443221 2346899999 66777764321 1222221223244666555433 2456
Q ss_pred EEEc
Q 007704 565 ERFK 568 (592)
Q Consensus 565 ~~Yd 568 (592)
| ++
T Consensus 288 ~-~~ 290 (347)
T 2gop_A 288 Y-IW 290 (347)
T ss_dssp E-EE
T ss_pred E-Ec
Confidence 6 66
No 176
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=93.01 E-value=9.4 Score=42.56 Aligned_cols=203 Identities=11% Similarity=-0.017 Sum_probs=108.5
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCC--------cccceEEEEeCC
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGL--------ECFSDVEMLDLD 428 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~--------~~~~~v~~yD~~ 428 (592)
+++.++++-..++....+++++|..+++.... .++..+....+-+ +++-++++..+.. .....++++++.
T Consensus 139 Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lg 216 (693)
T 3iuj_A 139 DGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLG 216 (693)
T ss_dssp TSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETT
T ss_pred CCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECC
Confidence 67777775544444446899999999987554 1121112222334 6654444443321 234578888887
Q ss_pred CCeE--EEcccccC--cccceEEEE-ECCEEEEEeccCCCCCCCeeEEEeCCCC--eEEEeccCCCCCceeEEEEECCEE
Q 007704 429 IGKW--IRTRSMLQ--KRFALAAAE-LNGVLYATGGYDGNEYMNSAERFDPREH--YWTKIANMNRRRGCHSLAVLNGKL 501 (592)
Q Consensus 429 t~~W--~~i~~~p~--~R~~~~a~~-~~g~IYV~GG~~~~~~~~~v~~yD~~t~--~W~~i~~~p~~R~~~s~v~~~~~L 501 (592)
+..= ..+-..+. +........ -+++..++....+ ...+.++++|+.+. .|..+..-...... .....++.|
T Consensus 217 t~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~-~~~~~g~~l 294 (693)
T 3iuj_A 217 TAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS-TSGNRLYVKDLSQENAPLLTVQGDLDADVS-LVDNKGSTL 294 (693)
T ss_dssp SCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS-SSCCEEEEEETTSTTCCCEEEECSSSSCEE-EEEEETTEE
T ss_pred CCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC-CCCcEEEEEECCCCCCceEEEeCCCCceEE-EEeccCCEE
Confidence 6542 12222121 121222222 2454333332211 12368999998766 68777543322221 133448899
Q ss_pred EEEecCCCCCCCCeEEEEeCCCC---eEEEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEEEEEcCCC
Q 007704 502 YALGGFDGSAMVPSIEVYDPRLG---SWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEGQ 571 (592)
Q Consensus 502 yv~GG~~~~~~~~~v~~yD~~t~---~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~~ 571 (592)
|+....+. ....++.+|+.+. .|+.+.+-.... . +....++.|++..-.++ ...++++|...
T Consensus 295 ~~~t~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~-~~s~~g~~lv~~~~~~g----~~~l~~~d~~g 359 (693)
T 3iuj_A 295 YLLTNRDA--PNRRLVTVDAANPGPAHWRDLIPERQQV-L-TVHSGSGYLFAEYMVDA----TARVEQFDYEG 359 (693)
T ss_dssp EEEECTTC--TTCEEEEEETTSCCGGGCEEEECCCSSC-E-EEEEETTEEEEEEEETT----EEEEEEECTTS
T ss_pred EEEECCCC--CCCEEEEEeCCCCCccccEEEecCCCCE-E-EEEEECCEEEEEEEECC----eeEEEEEECCC
Confidence 99876432 2457999998763 488764332222 2 44555677665544322 25688888873
No 177
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=93.00 E-value=4.4 Score=41.68 Aligned_cols=186 Identities=12% Similarity=0.222 Sum_probs=89.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeEEEcc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTR 436 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~ 436 (592)
++..++.|+.++ .+..||..+++-... +........+...++.+++.|+.+ ..+.++|..+......
T Consensus 158 dg~~lasgs~Dg-----~v~iWd~~~~~~~~~--~~~h~~~v~~~s~~~~~l~sgs~d-----~~i~~~d~~~~~~~~~- 224 (420)
T 4gga_A 158 EGNYLAVGTSSA-----EVQLWDVQQQKRLRN--MTSHSARVGSLSWNSYILSSGSRS-----GHIHHHDVRVAEHHVA- 224 (420)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTTEEEEE--ECCCSSCEEEEEEETTEEEEEETT-----SEEEEEETTSSSCEEE-
T ss_pred CCCEEEEEECCC-----eEEEEEcCCCcEEEE--EeCCCCceEEEeeCCCEEEEEeCC-----CceeEeeecccceeeE-
Confidence 677778888663 578889888765332 222223334556678888888755 3567777665433211
Q ss_pred cccCcccceEEEE--ECCEEEEEeccCCCCCCCeeEEEeCCCCe--EEEeccCCCCCc-eeEEEEE--CCEEEEEecCCC
Q 007704 437 SMLQKRFALAAAE--LNGVLYATGGYDGNEYMNSAERFDPREHY--WTKIANMNRRRG-CHSLAVL--NGKLYALGGFDG 509 (592)
Q Consensus 437 ~~p~~R~~~~a~~--~~g~IYV~GG~~~~~~~~~v~~yD~~t~~--W~~i~~~p~~R~-~~s~v~~--~~~Lyv~GG~~~ 509 (592)
.+........... -++..++.|+.+ ..+.++|..++. +..+........ -.+++.. +..+++.||...
T Consensus 225 ~~~~h~~~~~~~~~~~~g~~l~s~~~D-----~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~ 299 (420)
T 4gga_A 225 TLSGHSQEVCGLRWAPDGRHLASGGND-----NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS 299 (420)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTT
T ss_pred EecccccceeeeeecCCCCeeeeeecc-----ccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecC
Confidence 1111111111111 245566666654 345667665432 111111111111 1122222 444555543211
Q ss_pred CCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecccCCCccccEEEEEcCC
Q 007704 510 SAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 510 ~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+ ..|.+||+.+..-...-.. .....+++.. ++.+++.+|..+ ..|.+||..
T Consensus 300 D---~~I~iwd~~t~~~~~~~~~--~~~v~~~~~~~~~~~lv~~sg~~d-----~~I~iwd~~ 352 (420)
T 4gga_A 300 D---RHIRIWNVCSGACLSAVDA--HSQVCSILWSPHYKELISGHGFAQ-----NQLVIWKYP 352 (420)
T ss_dssp T---CEEEEEETTTTEEEEEEEC--SSCEEEEEEETTTTEEEEEECTTT-----CCEEEEETT
T ss_pred C---CEEEEEeCCccccceeecc--ccceeeeeecCCCCeEEEEEecCC-----CEEEEEECC
Confidence 1 3588899988765443211 1112222222 345555555433 347777764
No 178
>2hd9_A UPF0310 protein PH1033; pyrococcus horikoshii OT3, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: CIT; 1.35A {Pyrococcus horikoshii} SCOP: b.122.1.8 PDB: 1wmm_A* 2zbn_A
Probab=92.84 E-value=0.23 Score=44.65 Aligned_cols=113 Identities=17% Similarity=0.202 Sum_probs=74.6
Q ss_pred ChHHHhhhccccCCccCccchhccCCCCeEEEEecCC---------CeEeeEEEeccCCCccccCCCCC-CC-CCCCCCC
Q 007704 29 TIKECLAKQLFGLPAQHFLYVRKVDPGLPLFLFNYTD---------RKLHGIFEAASPGMMNINPYGWT-DG-SERTSYP 97 (592)
Q Consensus 29 t~~e~~~~~~fgl~~~~~~~v~~i~~g~~lfl~~~~~---------~~l~g~~~a~s~g~~~~~~~a~~-~~-~~~~~~p 97 (592)
.-..+-....+|.+-.+..+++.+|||..+|.|--.. +..-||+|.++ .--.+|.+|. +. -...++|
T Consensus 12 ~~~~~~~~g~~GVn~~arn~lr~mk~GD~~~fYhs~~~~~~~~~~~~~ivGi~eV~~--e~y~D~t~~~~~~~~~~~~~p 89 (145)
T 2hd9_A 12 NWEVIKRHNVWGVPKKHKNTLSRVKPGDKLVIYVRQEKDKEGNLLEPKIVGIYEVTS--EPYVDFSRIFKPHRGGKETYP 89 (145)
T ss_dssp HHHHHHHHCEEEECGGGHHHHTTCCTTCEEEEEECCEECTTCCEECCEEEEEEEECS--CCEECCCCCSCCTTSSCCCCC
T ss_pred HHHHHHHcCccccCHHHHHHHHhCCCCCEEEEEEccccccCCCCCCceEEEEEEEcC--CcEeCCCccCCCcccccCCee
Confidence 3344555678899888889999999999999998766 78999999997 4455676663 11 1135888
Q ss_pred ceEEEEEeeeecCCCCCcchhHHH---h----cccCCCCCCCCCCHHHHHHHHH
Q 007704 98 AQVQIRVRMQCQPLNEEKFKPIIA---A----NYYTPHHFWFELDHSQASKLIA 144 (592)
Q Consensus 98 aqv~~~~~~~~~pl~e~~~~~~i~---~----n~~~~~~f~~~l~~~q~~~l~~ 144 (592)
..|.++... +.+++-+.+++.+. + .++-.++--++++.++-+.+++
T Consensus 90 ~rv~v~~v~-~~~i~~~~l~~~l~fi~~k~~w~~~l~r~gv~pV~~~d~~~I~~ 142 (145)
T 2hd9_A 90 YRVKIKPIK-IGEINFKPLINDLKFIKNKKRWSMHFFGKAMRELPEEDYKLIEK 142 (145)
T ss_dssp EEEEEEEEE-EEEEESGGGGGGCTTCCCSTTGGGGTTTCSEEEECHHHHHHHHH
T ss_pred EEEeCEEEe-eccCcHHHHHhhhhhhcccccccceecccCceEcCHHHHHHHHH
Confidence 888887765 46666555554322 0 1111123346677777666554
No 179
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=92.83 E-value=6.8 Score=44.02 Aligned_cols=203 Identities=13% Similarity=0.011 Sum_probs=107.9
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEE-ECCEEEEEecCCCC---------cccceEEEEe
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGAT-IDNKIFAIGGGNGL---------ECFSDVEMLD 426 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~Iyv~GG~~~~---------~~~~~v~~yD 426 (592)
+++.++++...++.....++++|..++++.... .+..+.. ..+. -+ +-++++..+.. .....+++++
T Consensus 173 DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~-~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~ 249 (741)
T 1yr2_A 173 DGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFS-GLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHR 249 (741)
T ss_dssp TSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESC-CCEESTT-SEEEEEECCCC--------CCCCCEEEEEE
T ss_pred CCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceec-cEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEE
Confidence 677777766443333457999999999885531 1111101 1111 24 54444443321 1245688888
Q ss_pred CCCCeE--EEcccccC-cccceEEEE-ECCEEEEEeccCCCCCCCeeEEEeCCCC--e-EEEeccCCCCCceeEEEEECC
Q 007704 427 LDIGKW--IRTRSMLQ-KRFALAAAE-LNGVLYATGGYDGNEYMNSAERFDPREH--Y-WTKIANMNRRRGCHSLAVLNG 499 (592)
Q Consensus 427 ~~t~~W--~~i~~~p~-~R~~~~a~~-~~g~IYV~GG~~~~~~~~~v~~yD~~t~--~-W~~i~~~p~~R~~~s~v~~~~ 499 (592)
+.++.- ..+-..+. +........ -+|+..++...+.....+.++++|+.+. . |..+.......... +...++
T Consensus 250 lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~ 328 (741)
T 1yr2_A 250 LGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGD 328 (741)
T ss_dssp TTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETT
T ss_pred CCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCC
Confidence 876642 12211111 112222222 2554444444333223578999999887 6 88775433322222 223477
Q ss_pred EEEEEecCCCCCCCCeEEEEeCCC--CeEEEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEEEEEcCC
Q 007704 500 KLYALGGFDGSAMVPSIEVYDPRL--GSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 500 ~Lyv~GG~~~~~~~~~v~~yD~~t--~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.||+....+ .....++.+|..+ ..|+.+-+-... ....+...++.+++....++ ...++++|+.
T Consensus 329 ~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~l~~~~~~-~l~~~~~~~~~lv~~~~~dg----~~~l~~~~~~ 394 (741)
T 1yr2_A 329 QLWFVSGDG--APLKKIVRVDLSGSTPRFDTVVPESKD-NLESVGIAGNRLFASYIHDA----KSQVLAFDLD 394 (741)
T ss_dssp EEEEEECTT--CTTCEEEEEECSSSSCEEEEEECCCSS-EEEEEEEEBTEEEEEEEETT----EEEEEEEETT
T ss_pred EEEEEECCC--CCCCEEEEEeCCCCccccEEEecCCCC-eEEEEEEECCEEEEEEEECC----EEEEEEEeCC
Confidence 777775432 2245799999987 579887532211 12233444788777765543 2567888865
No 180
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=92.81 E-value=1.5 Score=47.74 Aligned_cols=183 Identities=7% Similarity=-0.024 Sum_probs=91.1
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE-CCE-EEEEecCCCCcccceEEEEeC--CCCeE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI-DNK-IFAIGGGNGLECFSDVEMLDL--DIGKW 432 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~-Iyv~GG~~~~~~~~~v~~yD~--~t~~W 432 (592)
++.+|+.+..+ +.+.++|..+++.... ++.....|.++.. +++ +|+.+. + ..+.+||+ .+.+-
T Consensus 148 ~~~~~vs~~~d-----~~V~v~D~~t~~~~~~--i~~g~~~~~v~~spdg~~l~v~~~-d-----~~V~v~D~~~~t~~~ 214 (543)
T 1nir_A 148 PNLFSVTLRDA-----GQIALVDGDSKKIVKV--IDTGYAVHISRMSASGRYLLVIGR-D-----ARIDMIDLWAKEPTK 214 (543)
T ss_dssp GGEEEEEEGGG-----TEEEEEETTTCCEEEE--EECSTTEEEEEECTTSCEEEEEET-T-----SEEEEEETTSSSCEE
T ss_pred CCEEEEEEcCC-----CeEEEEECCCceEEEE--EecCcccceEEECCCCCEEEEECC-C-----CeEEEEECcCCCCcE
Confidence 67888877644 4688899988765332 1111123444332 554 555542 2 67999999 66543
Q ss_pred EEcccccCcccceEEEEE-----CC-EEEEEeccCCCCCCCeeEEEeCCCCeEEEe-cc--C--------CCCCceeEEE
Q 007704 433 IRTRSMLQKRFALAAAEL-----NG-VLYATGGYDGNEYMNSAERFDPREHYWTKI-AN--M--------NRRRGCHSLA 495 (592)
Q Consensus 433 ~~i~~~p~~R~~~~a~~~-----~g-~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i-~~--~--------p~~R~~~s~v 495 (592)
+..++....-..++.. ++ .+|+.+..+ +.+.++|..+.+-... +. + +.+|..+...
T Consensus 215 --~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~-----~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~ 287 (543)
T 1nir_A 215 --VAEIKIGIEARSVESSKFKGYEDRYTIAGAYWP-----PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIA 287 (543)
T ss_dssp --EEEEECCSEEEEEEECCSTTCTTTEEEEEEEES-----SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEE
T ss_pred --EEEEecCCCcceEEeCCCcCCCCCEEEEEEccC-----CeEEEEeccccccceeecccCcccCccccccCCceEEEEE
Confidence 3333332222333333 44 455543222 5678899887654332 21 1 1223222222
Q ss_pred EE-CCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCE-EEEEecccCCCccccEEEEEcCC
Q 007704 496 VL-NGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEA-IYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 496 ~~-~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~-Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.. ++.+|+.... ...++++|..+..-..+..++..+..+.++.- +++ +|+.+..+ +.|.++|..
T Consensus 288 s~~~~~~~vs~~~-----~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~------~~v~v~D~~ 354 (543)
T 1nir_A 288 SHEHPEFIVNVKE-----TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNS------NKVAVIDSK 354 (543)
T ss_dssp CSSSSEEEEEETT-----TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGG------TEEEEEETT
T ss_pred CCCCCEEEEEECC-----CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCC------CeEEEEECC
Confidence 22 4455554432 35789999876431111111223333333333 444 44433222 568888876
No 181
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=92.78 E-value=1.9 Score=47.42 Aligned_cols=206 Identities=8% Similarity=-0.065 Sum_probs=107.9
Q ss_pred CEE-EEEeeCCCCCCcceEEEEECC--C-CeEEECCCCCC---C-CcceEEEEECCEEEEEecCCC-----CcccceEEE
Q 007704 358 GEL-YIFGGGDGNSWHNTVESYSPA--N-DEWTSRPSLNG---T-KGSLAGATIDNKIFAIGGGNG-----LECFSDVEM 424 (592)
Q Consensus 358 ~~I-yv~GG~~~~~~~~~v~~yd~~--t-~~W~~l~~lp~---~-r~~~~~~~~~~~Iyv~GG~~~-----~~~~~~v~~ 424 (592)
++. +++.... ...+|.++.. + .....+...+. . +......+-+++.++++..+. .....++++
T Consensus 90 g~~~la~~~~~----~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~ 165 (662)
T 3azo_A 90 GGPLLVFTHFG----DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAA 165 (662)
T ss_dssp SSCEEEEEBTT----TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEE
T ss_pred CCeEEEEEECC----CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEE
Confidence 443 5555432 3568999987 4 66666655431 1 112222233666555554321 123368999
Q ss_pred EeCCC------CeEEEcc-cccCcccceEEEEECCEEEEEeccCCCC---CCCeeEEEeCC-CC---eEEEeccCCCCCc
Q 007704 425 LDLDI------GKWIRTR-SMLQKRFALAAAELNGVLYATGGYDGNE---YMNSAERFDPR-EH---YWTKIANMNRRRG 490 (592)
Q Consensus 425 yD~~t------~~W~~i~-~~p~~R~~~~a~~~~g~IYV~GG~~~~~---~~~~v~~yD~~-t~---~W~~i~~~p~~R~ 490 (592)
+|+.+ ++.+.+. .-.. .....+..-+|+..++...+... ...+++++|+. ++ ....+..-. ...
T Consensus 166 ~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~-~~~ 243 (662)
T 3azo_A 166 VPLDGSAAADRSAVRELSDDAHR-FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP-EEA 243 (662)
T ss_dssp EETTSTTTTCGGGSEESSCSCSS-EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET-TBC
T ss_pred EECCCCccccCCceeEEEecCCC-cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC-Cce
Confidence 99988 6666554 2211 11111111255544444433211 13579999998 57 444443211 111
Q ss_pred eeEEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCc-------ceEEEEE-CCEEEEEecccCCCccc
Q 007704 491 CHSLAVL-NGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRG-------YLGAAVV-KEAIYVIGGVKNGSEIV 561 (592)
Q Consensus 491 ~~s~v~~-~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~-------~~s~~v~-~~~Iyv~GG~~~~~~~~ 561 (592)
....... ++++|+.+..++ ...++.+|+.+..|+.+........ ...++.. ++++++.+.. +.
T Consensus 244 ~~~~~~spdg~l~~~~~~~~---~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~---- 315 (662)
T 3azo_A 244 IAQAEWAPDGSLIVATDRTG---WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GA---- 315 (662)
T ss_dssp EEEEEECTTSCEEEEECTTS---SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SS----
T ss_pred EcceEECCCCeEEEEECCCC---CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-Cc----
Confidence 2222222 677777766443 3479999998899988754321110 1233333 5677766654 32
Q ss_pred cEEEEEcCC-CcEEEcc
Q 007704 562 DTVERFKEG-QGWEEIN 577 (592)
Q Consensus 562 ~~v~~Yd~~-~~W~~v~ 577 (592)
..+|.+|.. .....+.
T Consensus 316 ~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 316 AVLGILDPESGELVDAA 332 (662)
T ss_dssp CEEEEEETTTTEEEECC
T ss_pred cEEEEEECCCCcEEEec
Confidence 568888876 5565553
No 182
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=92.78 E-value=6.5 Score=37.20 Aligned_cols=139 Identities=12% Similarity=0.023 Sum_probs=79.8
Q ss_pred EEEEECCEEEEEecCCCCcccceEEEEeCCCCeEE--Ec----ccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeE
Q 007704 399 AGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWI--RT----RSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAE 470 (592)
Q Consensus 399 ~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~--~i----~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~ 470 (592)
+++..+|++|+|=| ..+|.++.....+. .+ +.+|. .--++... ++++|+|-| +.+|
T Consensus 28 Ai~~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~wp~Lp~--~iDAa~~~~~~~~iyfFkG-------~~~w 91 (207)
T 1pex_A 28 AITSLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSFWPELPN--RIDAAYEHPSHDLIFIFRG-------RKFW 91 (207)
T ss_dssp EEEEETTEEEEEET-------TEEEEECSSSSCCEEEEHHHHCTTSCS--SCCEEEEETTTTEEEEEET-------TEEE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCcCCCceehhHhccCCCC--CccEEEEeccCCcEEEEcc-------CEEE
Confidence 45567999999977 46777776554432 22 23342 22233333 589999988 5577
Q ss_pred EEeCCCCeE---EEecc--CCCC-CceeEEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCeEEE-----c----CCCC
Q 007704 471 RFDPREHYW---TKIAN--MNRR-RGCHSLAVL--NGKLYALGGFDGSAMVPSIEVYDPRLGSWMS-----G----EPMK 533 (592)
Q Consensus 471 ~yD~~t~~W---~~i~~--~p~~-R~~~s~v~~--~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~-----v----~~lp 533 (592)
+|+-.+-.- ..|.. +|.. ..--+++.. ++++|+|-| +..|+||..+++-.. + ..+|
T Consensus 92 ~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~~~d~gyPr~i~~~~~Gip 164 (207)
T 1pex_A 92 ALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDTNHIMDKDYPRLIEEDFPGIG 164 (207)
T ss_dssp EESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETTTTEECSSCCCBHHHHSTTSC
T ss_pred EEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEeCcCccccCCCCccHHHcCCCCC
Confidence 776432111 22322 2221 122233333 589999977 468999987654221 1 1122
Q ss_pred CCCcceEEEEECCEEEEEecccCCCccccEEEEEcCC
Q 007704 534 LSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 534 ~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
...-++...++.+|.|-| +..|+||+.
T Consensus 165 --~~iDaAf~~~g~~YfFkg--------~~y~rf~~~ 191 (207)
T 1pex_A 165 --DKVDAVYEKNGYIYFFNG--------PIQFEYSIW 191 (207)
T ss_dssp --SCCSEEEEETTEEEEEET--------TEEEEEETT
T ss_pred --CCccEEEEcCCcEEEEEC--------CEEEEEeCC
Confidence 222344456899999988 558999975
No 183
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=92.76 E-value=2.9 Score=46.41 Aligned_cols=182 Identities=13% Similarity=0.177 Sum_probs=94.2
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
++++++.|+.+ ..+.+||..+..-... +......-.++.+ +++.++.|+.+ ..+.++|.....-..
T Consensus 441 ~g~~l~sgs~D-----g~v~vwd~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~s~D-----~~i~iwd~~~~~~~~ 508 (694)
T 3dm0_A 441 DGQFALSGSWD-----GELRLWDLAAGVSTRR--FVGHTKDVLSVAFSLDNRQIVSASRD-----RTIKLWNTLGECKYT 508 (694)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEE--EECCSSCEEEEEECTTSSCEEEEETT-----SCEEEECTTSCEEEE
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCcceeE--EeCCCCCEEEEEEeCCCCEEEEEeCC-----CEEEEEECCCCccee
Confidence 67788888876 4688899887754321 1111111122222 66777777755 357778875543222
Q ss_pred cccccCc-ccceEEEEE--CC--EEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCEEEEEecC
Q 007704 435 TRSMLQK-RFALAAAEL--NG--VLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGKLYALGGF 507 (592)
Q Consensus 435 i~~~p~~-R~~~~a~~~--~g--~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~Lyv~GG~ 507 (592)
+...... +....++.+ ++ .+++.|+.+ ..+.+||+.+..-... +.........+.+ ++.+++.||.
T Consensus 509 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d-----~~v~vwd~~~~~~~~~--~~~h~~~v~~v~~spdg~~l~sg~~ 581 (694)
T 3dm0_A 509 ISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD-----KTVKVWNLSNCKLRST--LAGHTGYVSTVAVSPDGSLCASGGK 581 (694)
T ss_dssp ECSSTTSCSSCEEEEEECSCSSSCEEEEEETT-----SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEET
T ss_pred eccCCCCCCCcEEEEEEeCCCCcceEEEEeCC-----CeEEEEECCCCcEEEE--EcCCCCCEEEEEEeCCCCEEEEEeC
Confidence 2211111 111122222 22 456667655 4578899887654322 1111111222333 6788888887
Q ss_pred CCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEEEEEcCC
Q 007704 508 DGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 508 ~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
++ .+.+||..+..-.. .+.......+++...+..++.+|.+ +.|.+||..
T Consensus 582 Dg-----~i~iwd~~~~~~~~--~~~~~~~v~~~~~sp~~~~l~~~~~------~~i~iwd~~ 631 (694)
T 3dm0_A 582 DG-----VVLLWDLAEGKKLY--SLEANSVIHALCFSPNRYWLCAATE------HGIKIWDLE 631 (694)
T ss_dssp TS-----BCEEEETTTTEEEE--CCBCSSCEEEEEECSSSSEEEEEET------TEEEEEETT
T ss_pred CC-----eEEEEECCCCceEE--EecCCCcEEEEEEcCCCcEEEEEcC------CCEEEEECC
Confidence 64 47788988775332 2222222334444434444444433 347888875
No 184
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=92.73 E-value=1.7 Score=44.04 Aligned_cols=187 Identities=12% Similarity=0.086 Sum_probs=95.6
Q ss_pred CEEEEEeeCCCCCCcceEEEEECCCCe------EE-ECCCCCCCCcceEEEEE--C-CEEEEEecCCCCcccceEEEEeC
Q 007704 358 GELYIFGGGDGNSWHNTVESYSPANDE------WT-SRPSLNGTKGSLAGATI--D-NKIFAIGGGNGLECFSDVEMLDL 427 (592)
Q Consensus 358 ~~Iyv~GG~~~~~~~~~v~~yd~~t~~------W~-~l~~lp~~r~~~~~~~~--~-~~Iyv~GG~~~~~~~~~v~~yD~ 427 (592)
+.+++.|+.+ ..+..||..+.. -. .+............+.+ + +.+++.|+.+ ..+.+||.
T Consensus 126 ~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~v~iwd~ 195 (416)
T 2pm9_A 126 DNVLASGGNN-----GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS-----NFASIWDL 195 (416)
T ss_dssp TTBEEEECSS-----SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS-----SCEEEEET
T ss_pred CCEEEEEcCC-----CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC-----CCEEEEEC
Confidence 6677777765 357888887764 11 11111111111222222 3 5788888754 46889999
Q ss_pred CCCeEEEcccccC-----cccceEEEEE-C-CEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCC-CCCceeEEEEE--
Q 007704 428 DIGKWIRTRSMLQ-----KRFALAAAEL-N-GVLYATGGYDGNEYMNSAERFDPREHYWTKIANMN-RRRGCHSLAVL-- 497 (592)
Q Consensus 428 ~t~~W~~i~~~p~-----~R~~~~a~~~-~-g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p-~~R~~~s~v~~-- 497 (592)
.+.+....-.... ...-.+++.. + ..+++.|+.++. ...+.+||+.+..- .+..+. ........+.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d~~~~~~-~~~~~~~~~~~~v~~~~~s~ 272 (416)
T 2pm9_A 196 KAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN--DPSILIWDLRNANT-PLQTLNQGHQKGILSLDWCH 272 (416)
T ss_dssp TTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS--SCCCCEEETTSTTS-CSBCCCSCCSSCEEEEEECS
T ss_pred CCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC--CceEEEEeCCCCCC-CcEEeecCccCceeEEEeCC
Confidence 8876544322221 1112222222 2 357777775532 12577888887431 111111 11112223333
Q ss_pred -CCEEEEEecCCCCCCCCeEEEEeCCCCeEEE-cCCCCCCCcceEEEEE-CC-EEEEEecccCCCccccEEEEEcCC
Q 007704 498 -NGKLYALGGFDGSAMVPSIEVYDPRLGSWMS-GEPMKLSRGYLGAAVV-KE-AIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 498 -~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~-v~~lp~~R~~~s~~v~-~~-~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
++.+++.|+.++ .+.+||..+..-.. +... .....+++.. ++ .+++.|+.+ ..|.+||..
T Consensus 273 ~~~~~l~s~~~dg-----~v~~wd~~~~~~~~~~~~~--~~~v~~~~~s~~~~~~l~s~~~d------~~i~iw~~~ 336 (416)
T 2pm9_A 273 QDEHLLLSSGRDN-----TVLLWNPESAEQLSQFPAR--GNWCFKTKFAPEAPDLFACASFD------NKIEVQTLQ 336 (416)
T ss_dssp SCSSCEEEEESSS-----EEEEECSSSCCEEEEEECS--SSCCCCEEECTTCTTEEEECCSS------SEEEEEESC
T ss_pred CCCCeEEEEeCCC-----CEEEeeCCCCccceeecCC--CCceEEEEECCCCCCEEEEEecC------CcEEEEEcc
Confidence 577888888653 58889987764322 2111 1111223333 34 677777764 347788764
No 185
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=92.70 E-value=1.4 Score=44.66 Aligned_cols=188 Identities=15% Similarity=0.145 Sum_probs=96.3
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCC----C-eEEECCCCCCCCcceEEEEE-C-CEEEEEecCCCCcccceEEEEeCCC
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPAN----D-EWTSRPSLNGTKGSLAGATI-D-NKIFAIGGGNGLECFSDVEMLDLDI 429 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t----~-~W~~l~~lp~~r~~~~~~~~-~-~~Iyv~GG~~~~~~~~~v~~yD~~t 429 (592)
++.+++.|+.++ .+..||..+ . ....+.....+ -.+++.. + +.+++.|+.+ ..+.+||..+
T Consensus 78 ~~~~l~~~~~dg-----~v~vw~~~~~~~~~~~~~~~~~h~~~--v~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~ 145 (416)
T 2pm9_A 78 NNKIIAGALDNG-----SLELYSTNEANNAINSMARFSNHSSS--VKTVKFNAKQDNVLASGGNN-----GEIFIWDMNK 145 (416)
T ss_dssp SSSCEEEEESSS-----CEEEECCSSTTSCCCEEEECCCSSSC--CCEEEECSSSTTBEEEECSS-----SCEEBCBTTT
T ss_pred CCCeEEEEccCC-----eEEEeecccccccccchhhccCCccc--eEEEEEcCCCCCEEEEEcCC-----CeEEEEECCC
Confidence 667777777653 578888876 2 33333221111 1122222 2 6777887754 3678888877
Q ss_pred Ce------EE-Eccccc-CcccceEEEEE-C-CEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCC-----CCceeEE
Q 007704 430 GK------WI-RTRSML-QKRFALAAAEL-N-GVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNR-----RRGCHSL 494 (592)
Q Consensus 430 ~~------W~-~i~~~p-~~R~~~~a~~~-~-g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~-----~R~~~s~ 494 (592)
.+ -. .+.... ....-.+++.. + +.+++.|+.+ ..+.+||+.+..-...-.... .....++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~ 220 (416)
T 2pm9_A 146 CTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS-----NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVV 220 (416)
T ss_dssp TSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS-----SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEE
T ss_pred CccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC-----CCEEEEECCCCCcceEEeccccccccCCceEEE
Confidence 64 11 111111 11112223332 2 5677877765 458899998876544322221 2222233
Q ss_pred EEE-C-CEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCC--CCCcceEEEEE--CCEEEEEecccCCCccccEEEEEc
Q 007704 495 AVL-N-GKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMK--LSRGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERFK 568 (592)
Q Consensus 495 v~~-~-~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp--~~R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd 568 (592)
+.. + ..+++.|+.++. ...+.+||..+..- .+..+. ......+++.. ++.+++.|+.+ ..|.+||
T Consensus 221 ~~~~~~~~~l~~~~~d~~--~~~i~~~d~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d------g~v~~wd 291 (416)
T 2pm9_A 221 EWHPKNSTRVATATGSDN--DPSILIWDLRNANT-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD------NTVLLWN 291 (416)
T ss_dssp EECSSCTTEEEEEECCSS--SCCCCEEETTSTTS-CSBCCCSCCSSCEEEEEECSSCSSCEEEEESS------SEEEEEC
T ss_pred EECCCCCCEEEEEECCCC--CceEEEEeCCCCCC-CcEEeecCccCceeEEEeCCCCCCeEEEEeCC------CCEEEee
Confidence 333 3 357777775531 12577888876421 111222 11222233332 56777777764 3488888
Q ss_pred CC
Q 007704 569 EG 570 (592)
Q Consensus 569 ~~ 570 (592)
..
T Consensus 292 ~~ 293 (416)
T 2pm9_A 292 PE 293 (416)
T ss_dssp SS
T ss_pred CC
Confidence 75
No 186
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=92.68 E-value=2.8 Score=41.12 Aligned_cols=176 Identities=11% Similarity=0.072 Sum_probs=90.9
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCC--CCcceE-E-EEECCEEEEEecCCC------CcccceEEEEe
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNG--TKGSLA-G-ATIDNKIFAIGGGNG------LECFSDVEMLD 426 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~--~r~~~~-~-~~~~~~Iyv~GG~~~------~~~~~~v~~yD 426 (592)
++++|+..+ +.++.||+.+++++.+..... +..... + +.-++++|+..-... ......++.+|
T Consensus 64 dG~l~v~~~-------~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d 136 (297)
T 3g4e_A 64 SGGYVATIG-------TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLF 136 (297)
T ss_dssp TSSEEEEET-------TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEEC
T ss_pred CCCEEEEEC-------CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEE
Confidence 566665431 469999999998877643321 112122 2 222678887432111 11234788888
Q ss_pred CCCCeEEEc-ccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeC--CCCeEEE---eccCCCC-CceeEEEEE
Q 007704 427 LDIGKWIRT-RSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDP--REHYWTK---IANMNRR-RGCHSLAVL 497 (592)
Q Consensus 427 ~~t~~W~~i-~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~--~t~~W~~---i~~~p~~-R~~~s~v~~ 497 (592)
+.. +...+ ..+..+ ...+.. +..+|+..... +.+++||. .++.... +...+.. ..-..++.-
T Consensus 137 ~~g-~~~~~~~~~~~p---ngi~~spdg~~lyv~~~~~-----~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d 207 (297)
T 3g4e_A 137 PDH-HVKKYFDQVDIS---NGLDWSLDHKIFYYIDSLS-----YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCID 207 (297)
T ss_dssp TTS-CEEEEEEEESBE---EEEEECTTSCEEEEEEGGG-----TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEB
T ss_pred CCC-CEEEEeeccccc---cceEEcCCCCEEEEecCCC-----CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEEC
Confidence 863 33332 121111 122322 34688876432 56788875 5555432 1222211 111233332
Q ss_pred -CCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEEC----CEEEEEeccc
Q 007704 498 -NGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVK----EAIYVIGGVK 555 (592)
Q Consensus 498 -~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~----~~Iyv~GG~~ 555 (592)
++.||+.... -..|.+||+.+.+....-.+|.. ..+.+.++ +.|||.....
T Consensus 208 ~~G~lwva~~~-----~~~v~~~d~~tG~~~~~i~~p~~--~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 208 AEGKLWVACYN-----GGRVIRLDPVTGKRLQTVKLPVD--KTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp TTSCEEEEEET-----TTEEEEECTTTCCEEEEEECSSS--BEEEEEEESGGGCEEEEEEBCT
T ss_pred CCCCEEEEEcC-----CCEEEEEcCCCceEEEEEECCCC--CceEEEEeCCCCCEEEEEcCCc
Confidence 6788887432 13599999997765543334432 23333342 4799987643
No 187
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=92.62 E-value=7.6 Score=38.58 Aligned_cols=105 Identities=13% Similarity=0.170 Sum_probs=53.3
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeE-----EECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCC
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEW-----TSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDI 429 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W-----~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t 429 (592)
++.+++.||.++ .+..||..+..- .....+......-..+.+ ++.+++.|+.+ ..+.+||..+
T Consensus 38 d~~~l~sgs~D~-----~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D-----~~v~lwd~~~ 107 (343)
T 2xzm_R 38 DSPVLISGSRDK-----TVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWD-----KTLRLWDLRT 107 (343)
T ss_dssp CCCEEEEEETTS-----CEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETT-----SEEEEEETTS
T ss_pred CCCEEEEEcCCC-----EEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCC-----CcEEEEECCC
Confidence 567888888763 466666554320 111111111111222222 56677777755 4788899988
Q ss_pred CeEEEcccccC-cccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCe
Q 007704 430 GKWIRTRSMLQ-KRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHY 478 (592)
Q Consensus 430 ~~W~~i~~~p~-~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~ 478 (592)
++.... +.. ...-.+++.. ++..++.||.+ ..+.+||+....
T Consensus 108 ~~~~~~--~~~h~~~v~~v~~sp~~~~l~s~~~d-----~~i~~wd~~~~~ 151 (343)
T 2xzm_R 108 GTTYKR--FVGHQSEVYSVAFSPDNRQILSAGAE-----REIKLWNILGEC 151 (343)
T ss_dssp SCEEEE--EECCCSCEEEEEECSSTTEEEEEETT-----SCEEEEESSSCE
T ss_pred CcEEEE--EcCCCCcEEEEEECCCCCEEEEEcCC-----CEEEEEeccCCc
Confidence 754321 111 1111122222 55666777755 357778876443
No 188
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=92.56 E-value=0.84 Score=54.44 Aligned_cols=184 Identities=11% Similarity=0.098 Sum_probs=96.8
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeEEEcc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTR 436 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~ 436 (592)
++..+++|+.++ .+..||..+....................-+++.++.||.+ ..+.+||..+++.....
T Consensus 972 ~g~~l~~g~~~g-----~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d-----g~i~vwd~~~~~~~~~~ 1041 (1249)
T 3sfz_A 972 HLEYVAFGDEDG-----AIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED-----SVIQVWNWQTGDYVFLQ 1041 (1249)
T ss_dssp TSSEEEEEETTS-----CCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS-----SBEEEEETTTTEEECCB
T ss_pred CCCEEEEEcCCC-----CEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCceEEEe
Confidence 677778887653 56788887765433211111111112223367777777754 46889999988776433
Q ss_pred cccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEECCEEEEEecCCCCCCCCeE
Q 007704 437 SMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVLNGKLYALGGFDGSAMVPSI 516 (592)
Q Consensus 437 ~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v 516 (592)
.. ...-.+++...+..++.|+.+ ..+.+||..++.-...-..........+..-++..++.|+.++ .+
T Consensus 1042 ~~--~~~v~~~~~~~~~~l~~~~~d-----g~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~-----~v 1109 (1249)
T 3sfz_A 1042 AH--QETVKDFRLLQDSRLLSWSFD-----GTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADK-----TA 1109 (1249)
T ss_dssp CC--SSCEEEEEECSSSEEEEEESS-----SEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSS-----CC
T ss_pred cC--CCcEEEEEEcCCCcEEEEECC-----CcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCC-----cE
Confidence 21 112222333334445566654 4688899887653222111111111112222677778887654 36
Q ss_pred EEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecccCCCccccEEEEEcCC
Q 007704 517 EVYDPRLGSWMSGEPMKLSRGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 517 ~~yD~~t~~W~~v~~lp~~R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.+||..+.. .+..+........++.+ ++.+++.|+.++. |.+||..
T Consensus 1110 ~iwd~~~~~--~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~------i~vwd~~ 1157 (1249)
T 3sfz_A 1110 KIWSFDLLS--PLHELKGHNGCVRCSAFSLDGILLATGDDNGE------IRIWNVS 1157 (1249)
T ss_dssp CEECSSSSS--CSBCCCCCSSCEEEEEECSSSSEEEEEETTSC------CCEEESS
T ss_pred EEEECCCcc--eeeeeccCCCcEEEEEECCCCCEEEEEeCCCE------EEEEECC
Confidence 677776543 22222222222233333 6778888876543 7777764
No 189
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=92.52 E-value=5 Score=39.23 Aligned_cols=186 Identities=9% Similarity=0.013 Sum_probs=93.0
Q ss_pred CCE-EEEEeeCCCCCCcceEEEEEC-CCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCC---e
Q 007704 357 NGE-LYIFGGGDGNSWHNTVESYSP-ANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIG---K 431 (592)
Q Consensus 357 ~~~-Iyv~GG~~~~~~~~~v~~yd~-~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~---~ 431 (592)
++. .++.|+.+ ..+..||. .+.....+...+....-.+++...+.+++.|+.+ ..+.+||+.+. .
T Consensus 67 ~~~~~l~~~~~d-----g~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~ 136 (342)
T 1yfq_A 67 NTDLQIYVGTVQ-----GEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD-----GLIEVIDPRNYGDGV 136 (342)
T ss_dssp SSSEEEEEEETT-----SCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETT-----SEEEEECHHHHTTBC
T ss_pred CCCcEEEEEcCC-----CeEEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCC-----CeEEEEccccccccc
Confidence 677 77888865 36889999 8887766644111112222332236666777654 46778877640 0
Q ss_pred ----EEEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCC-Ce--EEEeccCCCCCceeEEEEE--CCEEE
Q 007704 432 ----WIRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPRE-HY--WTKIANMNRRRGCHSLAVL--NGKLY 502 (592)
Q Consensus 432 ----W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t-~~--W~~i~~~p~~R~~~s~v~~--~~~Ly 502 (592)
.+.+..+.....-.+++...+. +++|+.+ ..+.+||+.+ .. ...... +......++... ++.++
T Consensus 137 ~~~~~~~~~~~~~~~~v~~~~~~~~~-l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~l 209 (342)
T 1yfq_A 137 IAVKNLNSNNTKVKNKIFTMDTNSSR-LIVGMNN-----SQVQWFRLPLCEDDNGTIEES-GLKYQIRDVALLPKEQEGY 209 (342)
T ss_dssp EEEEESCSSSSSSCCCEEEEEECSSE-EEEEEST-----TEEEEEESSCCTTCCCEEEEC-SCSSCEEEEEECSGGGCEE
T ss_pred ccccCCeeeEEeeCCceEEEEecCCc-EEEEeCC-----CeEEEEECCccccccceeeec-CCCCceeEEEECCCCCCEE
Confidence 2222223322223334444555 5555543 4688999887 33 222211 111122233333 46778
Q ss_pred EEecCCCCCCCCeEEEEeCCCC--------eEEEcCCCC--CC---CcceEEEEE--CCEEEEEecccCCCccccEEEEE
Q 007704 503 ALGGFDGSAMVPSIEVYDPRLG--------SWMSGEPMK--LS---RGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERF 567 (592)
Q Consensus 503 v~GG~~~~~~~~~v~~yD~~t~--------~W~~v~~lp--~~---R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Y 567 (592)
+.|+.++ .+.+||.... ......... .. ......+.+ ++.+++.|+.++ .|.+|
T Consensus 210 ~~~~~dg-----~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg------~i~vw 278 (342)
T 1yfq_A 210 ACSSIDG-----RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDG------IISCW 278 (342)
T ss_dssp EEEETTS-----EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTS------CEEEE
T ss_pred EEEecCC-----cEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCc------eEEEE
Confidence 8887643 3555544332 222111110 00 112222233 566777777543 48889
Q ss_pred cCC
Q 007704 568 KEG 570 (592)
Q Consensus 568 d~~ 570 (592)
|..
T Consensus 279 d~~ 281 (342)
T 1yfq_A 279 NLQ 281 (342)
T ss_dssp ETT
T ss_pred cCc
Confidence 986
No 190
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=92.51 E-value=1.3 Score=43.93 Aligned_cols=152 Identities=11% Similarity=0.022 Sum_probs=81.7
Q ss_pred CCEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEe
Q 007704 404 DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKI 482 (592)
Q Consensus 404 ~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i 482 (592)
+++||+.+..+ ..+++||+.++++..+.... ...-.+++.. ++++|+.+..+. .....+++||+.+.....+
T Consensus 55 ~g~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~~-~~~~~i~~~d~~~~~~~~~ 127 (333)
T 2dg1_A 55 QGQLFLLDVFE-----GNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGDF-KSTGGIFAATENGDNLQDI 127 (333)
T ss_dssp TSCEEEEETTT-----CEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTTS-SSCCEEEEECTTSCSCEEE
T ss_pred CCCEEEEECCC-----CEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCCC-CCCceEEEEeCCCCEEEEE
Confidence 67888887532 47899999998877653211 1122223332 678888754321 1225789999998876533
Q ss_pred -ccCCCCCceeEEEEE-CCEEEEEecCCC-CCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CC-EEEEEecccCC
Q 007704 483 -ANMNRRRGCHSLAVL-NGKLYALGGFDG-SAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KE-AIYVIGGVKNG 557 (592)
Q Consensus 483 -~~~p~~R~~~s~v~~-~~~Lyv~GG~~~-~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~-~Iyv~GG~~~~ 557 (592)
...........++.- ++.+|+...... ......++.+|+.+...+.+..- .....+++.. ++ .+|+.....
T Consensus 128 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~dg~~l~v~~~~~-- 203 (333)
T 2dg1_A 128 IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--ISVANGIALSTDEKVLWVTETTA-- 203 (333)
T ss_dssp ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ESSEEEEEECTTSSEEEEEEGGG--
T ss_pred EccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CCcccceEECCCCCEEEEEeCCC--
Confidence 322222222233333 678887643211 11234689999887766654210 0111223322 33 477754322
Q ss_pred CccccEEEEEcCC
Q 007704 558 SEIVDTVERFKEG 570 (592)
Q Consensus 558 ~~~~~~v~~Yd~~ 570 (592)
+.|++||+.
T Consensus 204 ----~~i~~~d~~ 212 (333)
T 2dg1_A 204 ----NRLHRIALE 212 (333)
T ss_dssp ----TEEEEEEEC
T ss_pred ----CeEEEEEec
Confidence 457778763
No 191
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=92.44 E-value=11 Score=38.60 Aligned_cols=149 Identities=13% Similarity=0.072 Sum_probs=81.0
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
++.+++.|+.+ ..+..||..+.+-...-..+.......++.+ +++.++.|+.+ ..+.+||..+++...
T Consensus 181 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 181 EKSLLVALTNL-----SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR-----GIIDIWDIRFNVLIR 250 (437)
T ss_dssp SCEEEEEEETT-----SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC-----CeEEEEEcCCccEEE
Confidence 57888888866 4688999988764322111101122223333 67788888765 468899998865533
Q ss_pred cccccCcccceEEEEE-----CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEe-c-c---C------C------------
Q 007704 435 TRSMLQKRFALAAAEL-----NGVLYATGGYDGNEYMNSAERFDPREHYWTKI-A-N---M------N------------ 486 (592)
Q Consensus 435 i~~~p~~R~~~~a~~~-----~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i-~-~---~------p------------ 486 (592)
.-..+....-.+++.. ++.+++.|+.+ ..+.+||+.++.-... . . . |
T Consensus 251 ~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 325 (437)
T 3gre_A 251 SWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK-----TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCG 325 (437)
T ss_dssp EEBCTTCEEEEEEEECTTTCTTEEEEEEESTT-----EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCC
T ss_pred EEecCCCCceEEEEeccccCCCccEEEEEcCC-----CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecc
Confidence 2111111111111111 34566666644 3688899887763322 1 0 0 0
Q ss_pred --CCCceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCCe
Q 007704 487 --RRRGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLGS 525 (592)
Q Consensus 487 --~~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~ 525 (592)
......+++..++.+++.||.++ .+.+||..+..
T Consensus 326 ~~~~~~v~~l~~~~~~~l~s~~~d~-----~i~~wd~~~~~ 361 (437)
T 3gre_A 326 IRSLNALSTISVSNDKILLTDEATS-----SIVMFSLNELS 361 (437)
T ss_dssp CCSGGGGCCEEEETTEEEEEEGGGT-----EEEEEETTCGG
T ss_pred cccCCceEEEEECCceEEEecCCCC-----eEEEEECCCcc
Confidence 01112233444888888888664 57788876643
No 192
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=92.40 E-value=5.2 Score=44.80 Aligned_cols=118 Identities=17% Similarity=0.217 Sum_probs=72.3
Q ss_pred EEEECCEEEEEecCCCCcccceEEEEeCCCCe--EEEcccccCc--------ccceEEEEECCEEEEEeccCCCCCCCee
Q 007704 400 GATIDNKIFAIGGGNGLECFSDVEMLDLDIGK--WIRTRSMLQK--------RFALAAAELNGVLYATGGYDGNEYMNSA 469 (592)
Q Consensus 400 ~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~--W~~i~~~p~~--------R~~~~a~~~~g~IYV~GG~~~~~~~~~v 469 (592)
-++.++.||+... ...++.+|..|++ |+.-...+.. ......++.+++||+... -..+
T Consensus 73 P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------dg~l 140 (677)
T 1kb0_A 73 PVVVDGIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------DGRL 140 (677)
T ss_dssp CEEETTEEEEECG------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT------TSEE
T ss_pred CEEECCEEEEECC------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC------CCEE
Confidence 3457999999864 3578999998875 8764332210 112344567899988643 1468
Q ss_pred EEEeCCCCe--EEEecc-CCC--CCceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCCe--EEEc
Q 007704 470 ERFDPREHY--WTKIAN-MNR--RRGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLGS--WMSG 529 (592)
Q Consensus 470 ~~yD~~t~~--W~~i~~-~p~--~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~--W~~v 529 (592)
+.+|.++++ |+.-.. -.. .....+.++.++.||+-.+.........++.||..+.+ |+.-
T Consensus 141 ~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 141 IALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp EEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 999998775 876532 111 11222334568888875432211234579999998764 8763
No 193
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=92.31 E-value=0.88 Score=43.95 Aligned_cols=139 Identities=12% Similarity=0.095 Sum_probs=79.8
Q ss_pred ECCEEEEEeeCCCCCCcceEEEEEC------CC---------CeEEECCCCCCCCcceEEEE--ECCEEEEEecCCCCcc
Q 007704 356 LNGELYIFGGGDGNSWHNTVESYSP------AN---------DEWTSRPSLNGTKGSLAGAT--IDNKIFAIGGGNGLEC 418 (592)
Q Consensus 356 ~~~~Iyv~GG~~~~~~~~~v~~yd~------~t---------~~W~~l~~lp~~r~~~~~~~--~~~~Iyv~GG~~~~~~ 418 (592)
..+++|+|-| ..+|+++. .. ..|..+|..+......-++. .++++|+|-|
T Consensus 12 ~~ge~~fFk~-------~~~wr~~~~~~~~~~~~~~~p~~I~~~Wp~LP~~~f~~~~iDAa~~~~~g~~~fFkg------ 78 (225)
T 3oyo_A 12 SEYEVYFFAK-------NKYVRLHYTPGASSDTILTNLRLISSGFPSLAGTPFAEPGIDCSFHTEASEAYVFSG------ 78 (225)
T ss_dssp STTEEEEEET-------TEEEEEECCTTCSCCEEEEEEEEHHHHCGGGTTSTTTTTCCSEEEECSTTEEEEEET------
T ss_pred CCCEEEEEEC-------CEEEEEecccccccCcccCCceehhhhcccCCCccCCCCCEeEEEEcCCCeEEEEcC------
Confidence 3799999988 45788872 11 12222221111112333333 5899999987
Q ss_pred cceEEEEeCCC----CeEEEc--------ccccCc--ccceEEEEE---CCEEEEEeccCCCCCCCeeEEEeCCCCeEEE
Q 007704 419 FSDVEMLDLDI----GKWIRT--------RSMLQK--RFALAAAEL---NGVLYATGGYDGNEYMNSAERFDPREHYWTK 481 (592)
Q Consensus 419 ~~~v~~yD~~t----~~W~~i--------~~~p~~--R~~~~a~~~---~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~ 481 (592)
+.+|+||..+ ...... +.+|.. ...--++.. ++++|+|-| +..|+||..+.+...
T Consensus 79 -~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG-------~~yw~~d~~~~~~~~ 150 (225)
T 3oyo_A 79 -NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG-------NKYVRIAYDSKQLVG 150 (225)
T ss_dssp -TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred -CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC-------CeEEEEECCCCeecC
Confidence 5789997643 222211 122321 002223332 789999988 578999977766543
Q ss_pred e----c-cCCC------CCceeEEEEE--CCEEEEEecCCCCCCCCeEEEEeCC
Q 007704 482 I----A-NMNR------RRGCHSLAVL--NGKLYALGGFDGSAMVPSIEVYDPR 522 (592)
Q Consensus 482 i----~-~~p~------~R~~~s~v~~--~~~Lyv~GG~~~~~~~~~v~~yD~~ 522 (592)
- . ..|. +....++... ++++|+|-| +..|+||..
T Consensus 151 gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG-------~~ywr~d~~ 197 (225)
T 3oyo_A 151 NIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG-------QNYVRIDFT 197 (225)
T ss_dssp EEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET-------TEEEEEECC
T ss_pred CCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCC
Confidence 1 1 1121 2233444443 799999977 468999987
No 194
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=92.20 E-value=3.9 Score=38.40 Aligned_cols=144 Identities=17% Similarity=0.078 Sum_probs=80.7
Q ss_pred EEEEECCEEEEEeeCCCCCCcceEEEEECCCCe---EEEC----CCCCCCCcceEEEEECCEEEEEecCCCCcccceEEE
Q 007704 352 SAAMLNGELYIFGGGDGNSWHNTVESYSPANDE---WTSR----PSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEM 424 (592)
Q Consensus 352 s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~---W~~l----~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~ 424 (592)
+++..++++|+|-| +.+|+++...-. =..+ +.+|. ....+....++++|+|-| +.+|+
T Consensus 10 A~~~~~g~~~fFkg-------~~~w~~~~~~~~~gyP~~I~~~w~glP~-~iDAa~~~~~g~~yfFkg-------~~yw~ 74 (196)
T 3c7x_A 10 TVAMLRGEMFVFKE-------RWFWRVRNNQVMDGYPMPIGQFWRGLPA-SINTAYERKDGKFVFFKG-------DKHWV 74 (196)
T ss_dssp EEEEETTEEEEEET-------TEEEEEETTEECTTCSEEHHHHSTTCCS-SCCEEEECTTSCEEEEET-------TEEEE
T ss_pred EEEEcCCEEEEEEC-------CEEEEEECCccCCCCceEhhHhccCCCC-CccEEEEeCCCcEEEecC-------CEEEE
Confidence 44567999999998 568888643200 0111 22343 222222224788999987 57788
Q ss_pred EeCCCCeE---EEccc----ccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEE-----EeccC-CCCC
Q 007704 425 LDLDIGKW---IRTRS----MLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWT-----KIANM-NRRR 489 (592)
Q Consensus 425 yD~~t~~W---~~i~~----~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~-----~i~~~-p~~R 489 (592)
|+..+... +.+.. +|..+.. ++... ++++|.|-| +..++||..+++-. .+... ..+.
T Consensus 75 ~~~~~~~~gyPk~I~~~~~glP~~~ID-AA~~~~~~g~~yfFkG-------~~yw~yd~~~~~v~~gyPk~i~~~~gip~ 146 (196)
T 3c7x_A 75 FDEASLEPGYPKHIKELGRGLPTDKID-AALFWMPNGKTYFFRG-------NKYYRFNEELRAVDSEYPKNIKVWEGIPE 146 (196)
T ss_dssp EETTEECTTCSEEGGGTCBSCCSSCCS-EEEEETTTTEEEEEET-------TEEEEEETTTTEECTTCSEEGGGSBTCCS
T ss_pred EeCCcccCCCCeEhhhcCCCCCCCccc-EEEEEccCCEEEEEEC-------CEEEEEeCCcccccCCCCccHHHCCCcCC
Confidence 88542111 12322 3322222 23333 689999988 56899998775432 11111 1122
Q ss_pred ceeEEEEE-CC-EEEEEecCCCCCCCCeEEEEeCCCCe
Q 007704 490 GCHSLAVL-NG-KLYALGGFDGSAMVPSIEVYDPRLGS 525 (592)
Q Consensus 490 ~~~s~v~~-~~-~Lyv~GG~~~~~~~~~v~~yD~~t~~ 525 (592)
.-.++... ++ ++|+|-| +..|+||..+.+
T Consensus 147 ~idaAf~~~~~~~~YfFkg-------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 147 SPRGSFMGSDEVFTYFYKG-------NKYWKFNNQKLK 177 (196)
T ss_dssp SCSEEEECTTSSEEEEEET-------TEEEEEETTTTE
T ss_pred CcceeEEecCCCEEEEEEC-------CEEEEEECCcce
Confidence 22344444 44 9999977 468999988764
No 195
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=92.13 E-value=3.1 Score=41.13 Aligned_cols=185 Identities=11% Similarity=-0.005 Sum_probs=97.9
Q ss_pred CcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEE
Q 007704 371 WHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAEL 450 (592)
Q Consensus 371 ~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~ 450 (592)
....+|.+|..+++-..+ ........+-+|+.+++...........++++|..+++...+...+. .....+
T Consensus 41 ~~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~----~~~~~w 111 (347)
T 2gop_A 41 YENTIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN----IRSLEW 111 (347)
T ss_dssp EEEEEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE----EEEEEE
T ss_pred ccceEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC----ccceeE
Confidence 457899999998876665 11111222225654444432221123569999999988776654332 222222
Q ss_pred --CCEEEEEeccC------------------CC----CCCCeeEEEeCCCCeE-EEeccCCCCCceeEEEEE-CCEEEEE
Q 007704 451 --NGVLYATGGYD------------------GN----EYMNSAERFDPREHYW-TKIANMNRRRGCHSLAVL-NGKLYAL 504 (592)
Q Consensus 451 --~g~IYV~GG~~------------------~~----~~~~~v~~yD~~t~~W-~~i~~~p~~R~~~s~v~~-~~~Lyv~ 504 (592)
+++.++++... +. .....++++|+.++.. ..+.. + ........ ++ +++.
T Consensus 112 spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg-~~~~ 186 (347)
T 2gop_A 112 NEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDK-IVVN 186 (347)
T ss_dssp CTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E---TTCEEEEETTE-EEEE
T ss_pred CCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C---CcccccCCCCe-EEEE
Confidence 45433333321 10 1135689999999887 66654 3 22233333 55 6555
Q ss_pred ecCCCCC---C-CCeEEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCC--CccccEEEEEcCCCcEEEc
Q 007704 505 GGFDGSA---M-VPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNG--SEIVDTVERFKEGQGWEEI 576 (592)
Q Consensus 505 GG~~~~~---~-~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~--~~~~~~v~~Yd~~~~W~~v 576 (592)
+..+... . ...++.+| +..++.+..- .......-+++.+++++.... ......++++| ...+..+
T Consensus 187 ~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d-~~~~~~l 257 (347)
T 2gop_A 187 VPHREIIPQYFKFWDIYIWE--DGKEEKMFEK----VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD-GKEVMGI 257 (347)
T ss_dssp EECCCSSCCSSCCEEEEEEE--TTEEEEEEEE----ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC-SSCEEES
T ss_pred EecccccccccccccEEEeC--CCceEEeccC----cceeeECCCCCEEEEEEccccCCccccceEEEEC-CCceEec
Confidence 5443221 2 45788998 6777766431 112222446654444443321 11246799999 6555554
No 196
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=92.04 E-value=4.1 Score=40.28 Aligned_cols=141 Identities=7% Similarity=0.101 Sum_probs=70.8
Q ss_pred CCEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEE
Q 007704 404 DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTK 481 (592)
Q Consensus 404 ~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~ 481 (592)
+++.++.|+.+ ..+.+||+.+++-... +......-..+.+ ++.+++.|+.+ ..+.+||+....-..
T Consensus 76 dg~~l~s~s~D-----~~v~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~s~D-----~~i~vwd~~~~~~~~ 143 (319)
T 3frx_A 76 DGAYALSASWD-----KTLRLWDVATGETYQR--FVGHKSDVMSVDIDKKASMIISGSRD-----KTIKVWTIKGQCLAT 143 (319)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEE--EECCSSCEEEEEECTTSCEEEEEETT-----SCEEEEETTSCEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCCeeEE--EccCCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCeEEE
Confidence 67777888755 4788999988754221 1111111112222 56677778766 357788887654333
Q ss_pred eccCCCCCceeEEEEE-------CCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEec
Q 007704 482 IANMNRRRGCHSLAVL-------NGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGG 553 (592)
Q Consensus 482 i~~~p~~R~~~s~v~~-------~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG 553 (592)
+..-. ....++... ++.+++.||.++ .+..||..+..-...-. .......+++.. ++..++.||
T Consensus 144 ~~~h~--~~v~~~~~~~~~~~~~~~~~l~s~~~d~-----~i~~wd~~~~~~~~~~~-~h~~~v~~~~~sp~g~~l~s~~ 215 (319)
T 3frx_A 144 LLGHN--DWVSQVRVVPNEKADDDSVTIISAGNDK-----MVKAWNLNQFQIEADFI-GHNSNINTLTASPDGTLIASAG 215 (319)
T ss_dssp ECCCS--SCEEEEEECCC------CCEEEEEETTS-----CEEEEETTTTEEEEEEC-CCCSCEEEEEECTTSSEEEEEE
T ss_pred EeccC--CcEEEEEEccCCCCCCCccEEEEEeCCC-----EEEEEECCcchhheeec-CCCCcEEEEEEcCCCCEEEEEe
Confidence 32111 111112211 233666777653 47788887765432110 011111222222 566777777
Q ss_pred ccCCCccccEEEEEcCC
Q 007704 554 VKNGSEIVDTVERFKEG 570 (592)
Q Consensus 554 ~~~~~~~~~~v~~Yd~~ 570 (592)
.++ .|.+||..
T Consensus 216 ~dg------~i~iwd~~ 226 (319)
T 3frx_A 216 KDG------EIMLWNLA 226 (319)
T ss_dssp TTC------EEEEEETT
T ss_pred CCC------eEEEEECC
Confidence 543 36666654
No 197
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=91.85 E-value=2.8 Score=42.19 Aligned_cols=142 Identities=11% Similarity=-0.015 Sum_probs=78.9
Q ss_pred EEEEEecCCCCcccceEEEEeCCCCeEEEcccc-cCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEe
Q 007704 406 KIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSM-LQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKI 482 (592)
Q Consensus 406 ~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~-p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i 482 (592)
++++.|+.+ ..+.+||..+.+....-.. .....-.+++.. ++.+++.|+.+ ..+.+||+.+.....+
T Consensus 87 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~ 156 (383)
T 3ei3_B 87 TTVAVGSKG-----GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR-----GATTLRDFSGSVIQVF 156 (383)
T ss_dssp TEEEEEEBT-----SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT-----TEEEEEETTSCEEEEE
T ss_pred CEEEEEcCC-----CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC-----CEEEEEECCCCceEEE
Confidence 567777644 3688899988776654332 122222333333 34677777655 4688999998777666
Q ss_pred ccCCCC-CceeEEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCE-EEEEecccCCC
Q 007704 483 ANMNRR-RGCHSLAVL-NGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEA-IYVIGGVKNGS 558 (592)
Q Consensus 483 ~~~p~~-R~~~s~v~~-~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~-Iyv~GG~~~~~ 558 (592)
...... ....++... ++.+++.|+.+ ..+.+||........+... .....+++.. ++. +++.|+.+
T Consensus 157 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~h--~~~v~~~~~~~~~~~~l~s~~~d--- 226 (383)
T 3ei3_B 157 AKTDSWDYWYCCVDVSVSRQMLATGDST-----GRLLLLGLDGHEIFKEKLH--KAKVTHAEFNPRCDWLMATSSVD--- 226 (383)
T ss_dssp ECCCCSSCCEEEEEEETTTTEEEEEETT-----SEEEEEETTSCEEEEEECS--SSCEEEEEECSSCTTEEEEEETT---
T ss_pred eccCCCCCCeEEEEECCCCCEEEEECCC-----CCEEEEECCCCEEEEeccC--CCcEEEEEECCCCCCEEEEEeCC---
Confidence 433321 222233333 67777888765 3688999865544443321 1112222222 344 67777754
Q ss_pred ccccEEEEEcCC
Q 007704 559 EIVDTVERFKEG 570 (592)
Q Consensus 559 ~~~~~v~~Yd~~ 570 (592)
..|.+||..
T Consensus 227 ---~~i~iwd~~ 235 (383)
T 3ei3_B 227 ---ATVKLWDLR 235 (383)
T ss_dssp ---SEEEEEEGG
T ss_pred ---CEEEEEeCC
Confidence 346777753
No 198
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=91.76 E-value=8 Score=38.35 Aligned_cols=152 Identities=16% Similarity=0.126 Sum_probs=77.0
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEE-ECCEEEEEecCCCCcccceEEEEeCCCCeEE--
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGAT-IDNKIFAIGGGNGLECFSDVEMLDLDIGKWI-- 433 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~-- 433 (592)
++.+++.|+.++ .+..||..+.+-...........-.+++. -++.+++.|+.+ ..+.+||..+++-.
T Consensus 138 ~~~~l~s~s~dg-----~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d-----g~i~iwd~~~~~~~~~ 207 (343)
T 3lrv_A 138 NTEYFIWADNRG-----TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD-----GILDVYNLSSPDQASS 207 (343)
T ss_dssp -CCEEEEEETTC-----CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT-----SCEEEEESSCTTSCCE
T ss_pred CCCEEEEEeCCC-----cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCCCCcc
Confidence 466777788663 58889998877644322222211222222 267888888755 47889999877532
Q ss_pred EcccccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEE-EeccCCC--CCceeEEEEE--CCEEEEEecC
Q 007704 434 RTRSMLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWT-KIANMNR--RRGCHSLAVL--NGKLYALGGF 507 (592)
Q Consensus 434 ~i~~~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~-~i~~~p~--~R~~~s~v~~--~~~Lyv~GG~ 507 (592)
.+.. .....-.+++.. ++..++.|+ + +.+.+||+.+..-. .+..... ......++.+ +++.++.|+.
T Consensus 208 ~~~~-~h~~~v~~l~fs~~g~~l~s~~-~-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 208 RFPV-DEEAKIKEVKFADNGYWMVVEC-D-----QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp ECCC-CTTSCEEEEEECTTSSEEEEEE-S-----SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred EEec-cCCCCEEEEEEeCCCCEEEEEe-C-----CeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecC
Confidence 1111 011111122222 566666666 3 26889998875311 1111100 0001022333 5666666553
Q ss_pred -CCCCCCCeEEEEeCCCCeEEE
Q 007704 508 -DGSAMVPSIEVYDPRLGSWMS 528 (592)
Q Consensus 508 -~~~~~~~~v~~yD~~t~~W~~ 528 (592)
++ .-.+|.|+.....|..
T Consensus 281 ~d~---~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 281 ESN---SLTIYKFDKKTKNWTK 299 (343)
T ss_dssp TTT---EEEEEEECTTTCSEEE
T ss_pred CCC---cEEEEEEcccccceEe
Confidence 32 1234445556778987
No 199
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=91.62 E-value=11 Score=37.22 Aligned_cols=194 Identities=12% Similarity=0.064 Sum_probs=106.2
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCC--eEEECCCC------CCCCcce-EEEEE--CCEEEEEecCCCCcccceEEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPAND--EWTSRPSL------NGTKGSL-AGATI--DNKIFAIGGGNGLECFSDVEML 425 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~--~W~~l~~l------p~~r~~~-~~~~~--~~~Iyv~GG~~~~~~~~~v~~y 425 (592)
++.||+....+ +.+.+||+... .-..+... ....... .++.. ++.|||..+. ....+.+|
T Consensus 101 ~g~l~v~d~~~-----~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~----~~~~I~~~ 171 (329)
T 3fvz_A 101 DGNYWVTDVAL-----HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY----CNSRIVQF 171 (329)
T ss_dssp TSCEEEEETTT-----TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS----SCCEEEEE
T ss_pred CCCEEEEECCC-----CEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC----CCCeEEEE
Confidence 67788876533 56899998765 22222211 1111122 33333 6889999752 13578899
Q ss_pred eCCCCeEEEcccc-------cCcccce-EEEEE-C-CEEEEEeccCCCCCCCeeEEEeCCCCeEEEe-ccCCCCCceeEE
Q 007704 426 DLDIGKWIRTRSM-------LQKRFAL-AAAEL-N-GVLYATGGYDGNEYMNSAERFDPREHYWTKI-ANMNRRRGCHSL 494 (592)
Q Consensus 426 D~~t~~W~~i~~~-------p~~R~~~-~a~~~-~-g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i-~~~p~~R~~~s~ 494 (592)
|+....-..+... +...... .+++- + +.|||....+ ..+.+||+.+++.... ..........++
T Consensus 172 ~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~-----~~I~~~~~~~G~~~~~~~~~~~~~~~~~~ 246 (329)
T 3fvz_A 172 SPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN-----GRIQCFKTDTKEFVREIKHASFGRNVFAI 246 (329)
T ss_dssp CTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT-----TEEEEEETTTCCEEEEECCTTTTTCEEEE
T ss_pred cCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC-----CEEEEEECCCCcEEEEEeccccCCCccee
Confidence 9654433333211 1111122 33333 3 8999987533 5799999997766543 222222222334
Q ss_pred EEECCEEEEEecCCC--CCCCCeEEEEeCCCCeEEEc-CCCCCC-CcceEEEEE-CCEEEEEecccCCCccccEEEEEcC
Q 007704 495 AVLNGKLYALGGFDG--SAMVPSIEVYDPRLGSWMSG-EPMKLS-RGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKE 569 (592)
Q Consensus 495 v~~~~~Lyv~GG~~~--~~~~~~v~~yD~~t~~W~~v-~~lp~~-R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~ 569 (592)
+...+.+|...|... ......+.++|..+.+.... ...+.. ....++++- ++.|||....+ +.|++|++
T Consensus 247 ~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~------~~I~~~~~ 320 (329)
T 3fvz_A 247 SYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHT------NTVWKFTL 320 (329)
T ss_dssp EEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSS------CCEEEEEE
T ss_pred eecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCC------CEEEEEeC
Confidence 444577777777421 12345789999888776553 221111 222344443 56899877654 45888886
Q ss_pred C
Q 007704 570 G 570 (592)
Q Consensus 570 ~ 570 (592)
+
T Consensus 321 ~ 321 (329)
T 3fvz_A 321 T 321 (329)
T ss_dssp E
T ss_pred C
Confidence 4
No 200
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=91.52 E-value=3.5 Score=41.46 Aligned_cols=194 Identities=11% Similarity=-0.045 Sum_probs=93.9
Q ss_pred ceEEEEECCCCeEEECCCCCCCCcceEEEEE-CCEEEEEecCCC-CcccceEEEEeCCCCeEEEcccccCcccceEEEEE
Q 007704 373 NTVESYSPANDEWTSRPSLNGTKGSLAGATI-DNKIFAIGGGNG-LECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAEL 450 (592)
Q Consensus 373 ~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~Iyv~GG~~~-~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~ 450 (592)
..++.+|+.+++-..+...+. ...+...+- +++.+++..... ......++.+|..+...+.+............+..
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~-~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~s 246 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQ-WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWV 246 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESS-CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEEC
T ss_pred ceEEEEECCCCceEEeecCCc-cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceEC
Confidence 679999999887666532211 222333333 555444433221 12246899999988776666442211111111221
Q ss_pred -CCE-EEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCC------CceeEEEEECC-EEEEEe----cCCCCCCCCeEE
Q 007704 451 -NGV-LYATGGYDGNEYMNSAERFDPREHYWTKIANMNRR------RGCHSLAVLNG-KLYALG----GFDGSAMVPSIE 517 (592)
Q Consensus 451 -~g~-IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~------R~~~s~v~~~~-~Lyv~G----G~~~~~~~~~v~ 517 (592)
+|+ |+...... ......++++|+.++.-+.+...+.. ..+. ...-++ .|++.. |+.. .....++
T Consensus 247 pdg~~l~~~~~~~-~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~-~~spdg~~l~~~~~~~~~~~~-~~~~~i~ 323 (388)
T 3pe7_A 247 PDGSALVYVSYLK-GSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGS-LMVGDGSDAPVDVQDDSGYKI-ENDPFLY 323 (388)
T ss_dssp TTSSCEEEEEEET-TCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSS-EEEEEECCC-------------CCCCEEE
T ss_pred CCCCEEEEEecCC-CCCcceEEEEecCCCceEEEEcCCCceeeeecCCCC-eEccCCCcceeEeeecccccc-CCCCEEE
Confidence 454 43433222 12123599999999887766544320 0000 112233 233221 1110 1235799
Q ss_pred EEeCCCCeEEEcCCCCCCC---------cceEEEE-ECCEEEEEecccCCCccccEEEEEcCC-CcE
Q 007704 518 VYDPRLGSWMSGEPMKLSR---------GYLGAAV-VKEAIYVIGGVKNGSEIVDTVERFKEG-QGW 573 (592)
Q Consensus 518 ~yD~~t~~W~~v~~lp~~R---------~~~s~~v-~~~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~W 573 (592)
++|+.+...+.+...+.+. .....+. -+++.+++....+. ...+|.+|.. ..|
T Consensus 324 ~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g---~~~l~~~~l~~~~~ 387 (388)
T 3pe7_A 324 VFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHG---KPALYLATLPESVW 387 (388)
T ss_dssp EEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTS---SCEEEEEECCGGGG
T ss_pred EEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCC---ceeEEEEECChhcc
Confidence 9999998877765332210 1112222 25544444443222 2568888876 544
No 201
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=91.35 E-value=8.3 Score=38.60 Aligned_cols=181 Identities=12% Similarity=0.149 Sum_probs=95.3
Q ss_pred ECCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE-CCEEEEEecCCCCcccceEEEE-eCCCCeEE
Q 007704 356 LNGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI-DNKIFAIGGGNGLECFSDVEML-DLDIGKWI 433 (592)
Q Consensus 356 ~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~v~~y-D~~t~~W~ 433 (592)
-++.+|+.|... .+++-.-.-.+|+.+.... +...+.++.. ++.+|++|.. ..++.- |..-.+|+
T Consensus 131 ~~~~~~~~~~~g------~v~~S~DgG~tW~~~~~~~-~~~~~~~~~~~~~~~~~~g~~------G~~~~S~d~gG~tW~ 197 (327)
T 2xbg_A 131 GNGSAEMITNVG------AIYRTKDSGKNWQALVQEA-IGVMRNLNRSPSGEYVAVSSR------GSFYSTWEPGQTAWE 197 (327)
T ss_dssp ETTEEEEEETTC------CEEEESSTTSSEEEEECSC-CCCEEEEEECTTSCEEEEETT------SSEEEEECTTCSSCE
T ss_pred CCCCEEEEeCCc------cEEEEcCCCCCCEEeecCC-CcceEEEEEcCCCcEEEEECC------CcEEEEeCCCCCcee
Confidence 368888877421 3555444567898875432 2233444433 5677776631 133433 32257899
Q ss_pred EcccccCcccceEEEE-ECCEEEEEeccCCCCCCCeeEEEeCC-CCeEEEecc--CCCCCceeEEEEE-CCEEEEEecCC
Q 007704 434 RTRSMLQKRFALAAAE-LNGVLYATGGYDGNEYMNSAERFDPR-EHYWTKIAN--MNRRRGCHSLAVL-NGKLYALGGFD 508 (592)
Q Consensus 434 ~i~~~p~~R~~~~a~~-~~g~IYV~GG~~~~~~~~~v~~yD~~-t~~W~~i~~--~p~~R~~~s~v~~-~~~Lyv~GG~~ 508 (592)
.+.. +.+...+.++. -++.+|+.+.. ..+++.+.. ..+|+.+.. ++.....+.++.. ++.+|+.|+..
T Consensus 198 ~~~~-~~~~~~~~~~~~~~g~~~~~~~~------G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g 270 (327)
T 2xbg_A 198 PHNR-TTSRRLHNMGFTPDGRLWMIVNG------GKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAG 270 (327)
T ss_dssp EEEC-CSSSCEEEEEECTTSCEEEEETT------TEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTT
T ss_pred ECCC-CCCCccceeEECCCCCEEEEeCC------ceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCC
Confidence 8753 23333334433 25678877641 124444333 567987753 3333333344333 67888887621
Q ss_pred CCCCCCeEEEEeCCCCeEEEcCC-CCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcC
Q 007704 509 GSAMVPSIEVYDPRLGSWMSGEP-MKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKE 569 (592)
Q Consensus 509 ~~~~~~~v~~yD~~t~~W~~v~~-lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~ 569 (592)
.+++-.-.-.+|+.+.. .+.+...+.++.. ++.++++|. + ..++.++.
T Consensus 271 ------~i~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~-~------G~i~~~~~ 320 (327)
T 2xbg_A 271 ------ALLCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQ-K------GILLRYVT 320 (327)
T ss_dssp ------CEEEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECS-T------TEEEEECC
T ss_pred ------eEEEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcC-C------ceEEEEcC
Confidence 24333333568998863 2333334455444 566666553 3 24777775
No 202
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=91.29 E-value=10 Score=42.00 Aligned_cols=184 Identities=15% Similarity=0.209 Sum_probs=91.9
Q ss_pred CEEEEEeeCCCCCCcceEEEEECCCCe--EE-ECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeE
Q 007704 358 GELYIFGGGDGNSWHNTVESYSPANDE--WT-SRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKW 432 (592)
Q Consensus 358 ~~Iyv~GG~~~~~~~~~v~~yd~~t~~--W~-~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W 432 (592)
+.+++.||.++ .+..||..+.. +. ....+......-..+.+ ++++++.|+.+ ..+.++|..+++-
T Consensus 395 ~~~l~s~s~D~-----~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D-----g~v~vwd~~~~~~ 464 (694)
T 3dm0_A 395 ADIIVSASRDK-----SIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD-----GELRLWDLAAGVS 464 (694)
T ss_dssp CSEEEEEETTS-----EEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEE
T ss_pred CCEEEEEeCCC-----cEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC-----CcEEEEECCCCcc
Confidence 46788888663 56777765431 10 00011111111122222 67788888765 4788999988754
Q ss_pred EEcccccCcccceEEEE-ECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccC-CCCCceeEEEEE--CC--EEEEEec
Q 007704 433 IRTRSMLQKRFALAAAE-LNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANM-NRRRGCHSLAVL--NG--KLYALGG 506 (592)
Q Consensus 433 ~~i~~~p~~R~~~~a~~-~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~-p~~R~~~s~v~~--~~--~Lyv~GG 506 (592)
...-.- ....-.+++. -++..++.|+.+ ..+.+||.....-..+... ...+....++.+ ++ .+++.|+
T Consensus 465 ~~~~~~-h~~~v~~~~~s~~~~~l~s~s~D-----~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s 538 (694)
T 3dm0_A 465 TRRFVG-HTKDVLSVAFSLDNRQIVSASRD-----RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSAS 538 (694)
T ss_dssp EEEEEC-CSSCEEEEEECTTSSCEEEEETT-----SCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEE
T ss_pred eeEEeC-CCCCEEEEEEeCCCCEEEEEeCC-----CEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEe
Confidence 321100 0111112222 256666777765 3577788765433333221 112222233333 22 4677777
Q ss_pred CCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcce-EEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 507 FDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYL-GAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 507 ~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~-s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.++ .+.+||..+..-... +....... +++.. ++.+++.||.++ .|.+||..
T Consensus 539 ~d~-----~v~vwd~~~~~~~~~--~~~h~~~v~~v~~spdg~~l~sg~~Dg------~i~iwd~~ 591 (694)
T 3dm0_A 539 WDK-----TVKVWNLSNCKLRST--LAGHTGYVSTVAVSPDGSLCASGGKDG------VVLLWDLA 591 (694)
T ss_dssp TTS-----CEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS------BCEEEETT
T ss_pred CCC-----eEEEEECCCCcEEEE--EcCCCCCEEEEEEeCCCCEEEEEeCCC------eEEEEECC
Confidence 654 588899887654332 11111222 22322 567777787653 37777765
No 203
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=91.28 E-value=14 Score=37.69 Aligned_cols=182 Identities=13% Similarity=0.062 Sum_probs=100.2
Q ss_pred EEEEECCC--CeEEECCCCCCCCcceEEEEE---CCEEEEEecCCCCcccceEEEEeCCCCeEEEcccc---cCc--c--
Q 007704 375 VESYSPAN--DEWTSRPSLNGTKGSLAGATI---DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSM---LQK--R-- 442 (592)
Q Consensus 375 v~~yd~~t--~~W~~l~~lp~~r~~~~~~~~---~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~---p~~--R-- 442 (592)
++.++... .+|...........-++++.. .+.||+.+..... -.-+++.+-...+|+.+... +.. +
T Consensus 33 l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~--g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~ 110 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHL--GPTVFRSDDGGGNWTEATRPPAFNKAPEGET 110 (394)
T ss_dssp EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--C--CEEEEEESSTTSCCEECSBCCCCCCCC----
T ss_pred eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCC--CccEEEeCCCCCCceECCccccCCCcccccc
Confidence 67777654 689876321222223344443 4678887642111 12577777777899988532 211 1
Q ss_pred -----cceEEEEE----CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccC---CC--------------CCceeEEEE
Q 007704 443 -----FALAAAEL----NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANM---NR--------------RRGCHSLAV 496 (592)
Q Consensus 443 -----~~~~a~~~----~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~---p~--------------~R~~~s~v~ 496 (592)
.-.+++.. .+.||+.+. ...+++.+-...+|+.+... |. ....++++.
T Consensus 111 ~~~~~~i~~l~~~~~~~~~~l~~g~~------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~ 184 (394)
T 3b7f_A 111 GRVVDHVFWLTPGHASEPGTWYAGTS------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILV 184 (394)
T ss_dssp CCCCCEEEEEEECCTTSTTCEEEEEE------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEE
T ss_pred cccccceeEEEeCCCCCCCEEEEEec------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEE
Confidence 11123332 467877542 14578887778899988532 21 122334443
Q ss_pred E---CCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCC------CCCC-----CcceEEEEE-C--CEEEEEecccCCCc
Q 007704 497 L---NGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEP------MKLS-----RGYLGAAVV-K--EAIYVIGGVKNGSE 559 (592)
Q Consensus 497 ~---~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~------lp~~-----R~~~s~~v~-~--~~Iyv~GG~~~~~~ 559 (592)
. .+.||+..+. ..+++.+-...+|+.+.. +|.+ ...+++++. . +.||+..+
T Consensus 185 d~~~~~~l~vg~~~------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~------ 252 (394)
T 3b7f_A 185 DPRDPKHLYIGMSS------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH------ 252 (394)
T ss_dssp CTTCTTCEEEEEET------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET------
T ss_pred CCCCCCEEEEEECC------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC------
Confidence 3 2567775432 247788777889998753 1211 123344433 2 56776321
Q ss_pred cccEEEEEcCC-CcEEEccc
Q 007704 560 IVDTVERFKEG-QGWEEINS 578 (592)
Q Consensus 560 ~~~~v~~Yd~~-~~W~~v~~ 578 (592)
..|++++.. .+|+.+..
T Consensus 253 --~gl~~s~D~G~tW~~~~~ 270 (394)
T 3b7f_A 253 --CGIYRMDRREGVWKRIGD 270 (394)
T ss_dssp --TEEEEEETTTTEEECGGG
T ss_pred --CeEEEeCCCCCcceECCC
Confidence 338888877 89999854
No 204
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=91.26 E-value=8 Score=43.17 Aligned_cols=117 Identities=17% Similarity=0.187 Sum_probs=71.2
Q ss_pred EEEECCEEEEEecCCCCcccceEEEEeCCCCe--EEEcccccCc--------ccceEEEEECCEEEEEeccCCCCCCCee
Q 007704 400 GATIDNKIFAIGGGNGLECFSDVEMLDLDIGK--WIRTRSMLQK--------RFALAAAELNGVLYATGGYDGNEYMNSA 469 (592)
Q Consensus 400 ~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~--W~~i~~~p~~--------R~~~~a~~~~g~IYV~GG~~~~~~~~~v 469 (592)
-++.++.||+... ...++.+|..|++ |+.-...+.. ......++.+++||+... -..+
T Consensus 62 P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~l 129 (668)
T 1kv9_A 62 PLFHDGVIYTSMS------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------DGRL 129 (668)
T ss_dssp CEEETTEEEEEEG------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT------TSEE
T ss_pred CEEECCEEEEECC------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC------CCEE
Confidence 3467999999864 3578899988764 8764332211 011234567889988542 1468
Q ss_pred EEEeCCCCe--EEEeccCCC--CCceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCCe--EEE
Q 007704 470 ERFDPREHY--WTKIANMNR--RRGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLGS--WMS 528 (592)
Q Consensus 470 ~~yD~~t~~--W~~i~~~p~--~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~--W~~ 528 (592)
+.+|.++++ |+.-..-+. .....+.++.++.||+-.+.........++.||..+.+ |+.
T Consensus 130 ~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 130 IALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp EEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred EEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 999998875 886532211 12222345568888874332111234579999998764 876
No 205
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=91.18 E-value=22 Score=39.71 Aligned_cols=194 Identities=11% Similarity=0.072 Sum_probs=101.2
Q ss_pred cceEEEEECCCCeE--EECCCCC-CCCcceEE-EEECCEEEEEecCCCCcccceEEEEeCCCC--e-EEEcccccCcccc
Q 007704 372 HNTVESYSPANDEW--TSRPSLN-GTKGSLAG-ATIDNKIFAIGGGNGLECFSDVEMLDLDIG--K-WIRTRSMLQKRFA 444 (592)
Q Consensus 372 ~~~v~~yd~~t~~W--~~l~~lp-~~r~~~~~-~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~--~-W~~i~~~p~~R~~ 444 (592)
...++.++..+..- ..+-..+ .+...... .+-+|+..++.........++++++|..+. . |+.+..-......
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~ 321 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWD 321 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEE
T ss_pred CCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEE
Confidence 35688888766541 1111111 11212222 233666444444332223578999999887 6 8777543322222
Q ss_pred eEEEEECCEEEEEeccCCCCCCCeeEEEeCCC--CeEEEeccCCCCCceeEEEEECCEEEEEecCCCCCCCCeEEEEeCC
Q 007704 445 LAAAELNGVLYATGGYDGNEYMNSAERFDPRE--HYWTKIANMNRRRGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPR 522 (592)
Q Consensus 445 ~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t--~~W~~i~~~p~~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~ 522 (592)
. ....++.||+....+ .....++++|+.+ ..|+.+-+-.... ...+...++.|++....++ ...++.+|..
T Consensus 322 ~-~~~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~l~~~~~~~-l~~~~~~~~~lv~~~~~dg---~~~l~~~~~~ 394 (741)
T 1yr2_A 322 F-VDGVGDQLWFVSGDG--APLKKIVRVDLSGSTPRFDTVVPESKDN-LESVGIAGNRLFASYIHDA---KSQVLAFDLD 394 (741)
T ss_dssp E-EEEETTEEEEEECTT--CTTCEEEEEECSSSSCEEEEEECCCSSE-EEEEEEEBTEEEEEEEETT---EEEEEEEETT
T ss_pred E-EeccCCEEEEEECCC--CCCCEEEEEeCCCCccccEEEecCCCCe-EEEEEEECCEEEEEEEECC---EEEEEEEeCC
Confidence 2 234577788775432 2235799999988 5798875332221 1223334888888766443 3568889876
Q ss_pred CCeEEEcCCCCCCCcceEEEEE--CC-EEEE-EecccCCCccccEEEEEcCC-CcEEEccc
Q 007704 523 LGSWMSGEPMKLSRGYLGAAVV--KE-AIYV-IGGVKNGSEIVDTVERFKEG-QGWEEINS 578 (592)
Q Consensus 523 t~~W~~v~~lp~~R~~~s~~v~--~~-~Iyv-~GG~~~~~~~~~~v~~Yd~~-~~W~~v~~ 578 (592)
...-+.+. +|.. ........ ++ .|++ +.+.. .-.+++.||.. .....+..
T Consensus 395 g~~~~~l~-~~~~-~~v~~~~~s~d~~~l~~~~ss~~----~P~~i~~~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 395 GKPAGAVS-LPGI-GSASGLSGRPGDRHAYLSFSSFT----QPATVLALDPATAKTTPWEP 449 (741)
T ss_dssp SCEEEECB-CSSS-CEEEEEECCBTCSCEEEEEEETT----EEEEEEEEETTTTEEEECSC
T ss_pred CCceeecc-CCCC-eEEEEeecCCCCCEEEEEEcCCC----CCCEEEEEECCCCcEEEEec
Confidence 55444443 2221 11111221 33 2333 32322 22568899987 66666644
No 206
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=91.14 E-value=4.1 Score=48.42 Aligned_cols=105 Identities=18% Similarity=0.248 Sum_probs=59.9
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
+++.++.||.++ .+..||..+.+.... +......-.++.+ +++.++.|+.+ ..+.+||..+++...
T Consensus 626 ~~~~l~s~~~d~-----~i~vw~~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~~~d-----~~v~vwd~~~~~~~~ 693 (1249)
T 3sfz_A 626 DGQRIASCGADK-----TLQVFKAETGEKLLD--IKAHEDEVLCCAFSSDDSYIATCSAD-----KKVKIWDSATGKLVH 693 (1249)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEE
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCCEEEE--eccCCCCEEEEEEecCCCEEEEEeCC-----CeEEEEECCCCceEE
Confidence 677888888663 588999988765322 1222222223333 67788888754 468999998876543
Q ss_pred cccccCcccceEEEEE----CCEEEEEeccCCCCCCCeeEEEeCCCCeEE
Q 007704 435 TRSMLQKRFALAAAEL----NGVLYATGGYDGNEYMNSAERFDPREHYWT 480 (592)
Q Consensus 435 i~~~p~~R~~~~a~~~----~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~ 480 (592)
.- ........++.+ ++.+++.|+.+ ..+.+||+.++...
T Consensus 694 ~~--~~~~~~v~~~~~~~~~~~~~l~sg~~d-----~~v~vwd~~~~~~~ 736 (1249)
T 3sfz_A 694 TY--DEHSEQVNCCHFTNKSNHLLLATGSND-----FFLKLWDLNQKECR 736 (1249)
T ss_dssp EE--ECCSSCEEEEEECSSSSCCEEEEEETT-----SCEEEEETTSSSEE
T ss_pred EE--cCCCCcEEEEEEecCCCceEEEEEeCC-----CeEEEEECCCcchh
Confidence 21 111111222222 33456666654 35778888877643
No 207
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=91.08 E-value=12 Score=36.62 Aligned_cols=175 Identities=15% Similarity=0.080 Sum_probs=93.6
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE-CCEEEEEecCCCCcccceEEEEeCCCCe---E
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI-DNKIFAIGGGNGLECFSDVEMLDLDIGK---W 432 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~v~~yD~~t~~---W 432 (592)
++++||....... ..++.||+.+.+...+...+..+.....+.. ++.+|+.-. ....+|++|+.+++ |
T Consensus 82 dG~l~vad~~~~~---~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~-----~~g~i~~~d~~~~~~~v~ 153 (306)
T 2p4o_A 82 NGDLVATGWNADS---IPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADS-----YRGAIWLIDVVQPSGSIW 153 (306)
T ss_dssp TSCEEEEEECTTS---CEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEET-----TTTEEEEEETTTTEEEEE
T ss_pred CCcEEEEeccCCc---ceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEEC-----CCCeEEEEeCCCCcEeEE
Confidence 6778887643211 2488899888888766555444444444433 556777642 12489999998653 2
Q ss_pred EEccc----ccCcc--cceEEEEECCEEEEEeccCCCCCCCeeEEEeCCC-CeE---EEeccCCCCCceeEEEEE-CCEE
Q 007704 433 IRTRS----MLQKR--FALAAAELNGVLYATGGYDGNEYMNSAERFDPRE-HYW---TKIANMNRRRGCHSLAVL-NGKL 501 (592)
Q Consensus 433 ~~i~~----~p~~R--~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t-~~W---~~i~~~p~~R~~~s~v~~-~~~L 501 (592)
...+. .+... .......-++.+|+.-- ..+.+++||+.. +.. +.+.....++ .+++- ++.|
T Consensus 154 ~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~-----~~~~I~~~~~~~~g~~~~~~~~~~~~~P~---gi~vd~dG~l 225 (306)
T 2p4o_A 154 LEHPMLARSNSESVFPAANGLKRFGNFLYVSNT-----EKMLLLRIPVDSTDKPGEPEIFVEQTNID---DFAFDVEGNL 225 (306)
T ss_dssp EECGGGSCSSTTCCSCSEEEEEEETTEEEEEET-----TTTEEEEEEBCTTSCBCCCEEEEESCCCS---SEEEBTTCCE
T ss_pred EECCccccccccCCCCcCCCcCcCCCEEEEEeC-----CCCEEEEEEeCCCCCCCccEEEeccCCCC---CeEECCCCCE
Confidence 21111 11111 11222333568998653 236799999874 221 2222222222 23333 6788
Q ss_pred EEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEEC------CEEEEEec
Q 007704 502 YALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVK------EAIYVIGG 553 (592)
Q Consensus 502 yv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~------~~Iyv~GG 553 (592)
|+.... .+.|.+||+. .+...+...+.+-.....+.++ +.|||...
T Consensus 226 ~va~~~-----~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 226 YGATHI-----YNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EEECBT-----TCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred EEEeCC-----CCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 887432 3569999986 4554443333332223333332 68998765
No 208
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=91.04 E-value=13 Score=36.79 Aligned_cols=187 Identities=12% Similarity=0.101 Sum_probs=99.7
Q ss_pred ceEEEEECCCCeEEECCCCCCCCcceEEEEE-CCEEEEEecCCCCcccceEEEEeCCCC--eEEEcccc------cCccc
Q 007704 373 NTVESYSPANDEWTSRPSLNGTKGSLAGATI-DNKIFAIGGGNGLECFSDVEMLDLDIG--KWIRTRSM------LQKRF 443 (592)
Q Consensus 373 ~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~v~~yD~~t~--~W~~i~~~------p~~R~ 443 (592)
+.++.+|+.+++....-....-..-+.++.. +++||+.... ...+.+||+... .-..+... .....
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~-----~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~ 143 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVA-----LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFC 143 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETT-----TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCS
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECC-----CCEEEEEeCCCCeEEEEEecccCCCCCCccccC
Confidence 4699999988776432111110111233332 6789988653 257899998765 22222211 01111
Q ss_pred ceEEEEE---CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCC-------CC-CceeEEEEE-C-CEEEEEecCCCC
Q 007704 444 ALAAAEL---NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMN-------RR-RGCHSLAVL-N-GKLYALGGFDGS 510 (592)
Q Consensus 444 ~~~a~~~---~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p-------~~-R~~~s~v~~-~-~~Lyv~GG~~~~ 510 (592)
......+ ++.|||..++. ...+.+||+....-..+.... .. ..-+.+++- + +.||+....
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~--- 216 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYC----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE--- 216 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSS----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT---
T ss_pred CCcEEEEeCCCCeEEEEeCCC----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC---
Confidence 2333333 68899997531 257899997655444443211 11 112334443 4 899998753
Q ss_pred CCCCeEEEEeCCCCeEEE-cCCCCCCCcceEEEEECCEEEEEecccCC-CccccEEEEEcCC-CcE
Q 007704 511 AMVPSIEVYDPRLGSWMS-GEPMKLSRGYLGAAVVKEAIYVIGGVKNG-SEIVDTVERFKEG-QGW 573 (592)
Q Consensus 511 ~~~~~v~~yD~~t~~W~~-v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~-~~~~~~v~~Yd~~-~~W 573 (592)
...|.+||+.+.+... +..........+++...+.+|+..|...- ......+.+||.. .+.
T Consensus 217 --~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~ 280 (329)
T 3fvz_A 217 --NGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEI 280 (329)
T ss_dssp --TTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCE
T ss_pred --CCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeE
Confidence 2479999998666544 32222223333444445777777664221 1123568888865 443
No 209
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=90.82 E-value=6.6 Score=38.70 Aligned_cols=143 Identities=14% Similarity=0.178 Sum_probs=76.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
++..++.|+.+ ..+..||..+++-... +......-..+.+ ++.+++.|+.++ .+.+||.....-..
T Consensus 76 dg~~l~s~s~D-----~~v~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~s~D~-----~i~vwd~~~~~~~~ 143 (319)
T 3frx_A 76 DGAYALSASWD-----KTLRLWDVATGETYQR--FVGHKSDVMSVDIDKKASMIISGSRDK-----TIKVWTIKGQCLAT 143 (319)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEE--EECCSSCEEEEEECTTSCEEEEEETTS-----CEEEEETTSCEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCCeeEE--EccCCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCeEEE
Confidence 67777888866 4688999988764321 1111112222223 567888887653 57778876543322
Q ss_pred cccccCcccceEEEEE-------CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCEEEEEe
Q 007704 435 TRSMLQKRFALAAAEL-------NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGKLYALG 505 (592)
Q Consensus 435 i~~~p~~R~~~~a~~~-------~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~Lyv~G 505 (592)
+..... .-.+.... ++.+++.||.+ ..+.+||+.+..-... +......-..+.+ ++.+++.|
T Consensus 144 ~~~h~~--~v~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s~ 214 (319)
T 3frx_A 144 LLGHND--WVSQVRVVPNEKADDDSVTIISAGND-----KMVKAWNLNQFQIEAD--FIGHNSNINTLTASPDGTLIASA 214 (319)
T ss_dssp ECCCSS--CEEEEEECCC------CCEEEEEETT-----SCEEEEETTTTEEEEE--ECCCCSCEEEEEECTTSSEEEEE
T ss_pred EeccCC--cEEEEEEccCCCCCCCccEEEEEeCC-----CEEEEEECCcchhhee--ecCCCCcEEEEEEcCCCCEEEEE
Confidence 211100 11111111 23356666655 3578888887653321 1111111222333 67788888
Q ss_pred cCCCCCCCCeEEEEeCCCCe
Q 007704 506 GFDGSAMVPSIEVYDPRLGS 525 (592)
Q Consensus 506 G~~~~~~~~~v~~yD~~t~~ 525 (592)
|.++ .+.+||..+.+
T Consensus 215 ~~dg-----~i~iwd~~~~~ 229 (319)
T 3frx_A 215 GKDG-----EIMLWNLAAKK 229 (319)
T ss_dssp ETTC-----EEEEEETTTTE
T ss_pred eCCC-----eEEEEECCCCc
Confidence 8653 58889988764
No 210
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=90.68 E-value=9.6 Score=42.74 Aligned_cols=118 Identities=20% Similarity=0.252 Sum_probs=71.7
Q ss_pred EEEECCEEEEEecCCCCcccceEEEEeCCCCe--EEEcccccCc--------ccceEEEEECCEEEEEeccCCCCCCCee
Q 007704 400 GATIDNKIFAIGGGNGLECFSDVEMLDLDIGK--WIRTRSMLQK--------RFALAAAELNGVLYATGGYDGNEYMNSA 469 (592)
Q Consensus 400 ~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~--W~~i~~~p~~--------R~~~~a~~~~g~IYV~GG~~~~~~~~~v 469 (592)
-++.++.||+.+. ...++.+|..|++ |+.-...+.. ....+.++.+++||+... -..+
T Consensus 66 P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~------dg~l 133 (689)
T 1yiq_A 66 PIVVDGVMYTTGP------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL------DGRL 133 (689)
T ss_dssp CEEETTEEEEECG------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSEE
T ss_pred CEEECCEEEEEcC------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc------CCEE
Confidence 3467999999764 3568999998764 8764322210 011234567899988642 1468
Q ss_pred EEEeCCCCe--EEEecc-CCC--CCceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCCe--EEEc
Q 007704 470 ERFDPREHY--WTKIAN-MNR--RRGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLGS--WMSG 529 (592)
Q Consensus 470 ~~yD~~t~~--W~~i~~-~p~--~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~--W~~v 529 (592)
+.+|.++++ |+.-.. -+. .....+-++.++.+|+-.+......-..++.||..+.+ |+.-
T Consensus 134 ~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 134 EAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 999998875 886543 111 11222335568988874332111234579999998865 8763
No 211
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=90.61 E-value=16 Score=40.99 Aligned_cols=144 Identities=14% Similarity=0.051 Sum_probs=83.1
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeEEEcc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTR 436 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~ 436 (592)
++.|+|-.. +-+++||+.++++...... .+..-.+++..++.|||... ..+++||+.+++++...
T Consensus 73 ~g~lWigT~-------~Gl~~yd~~~~~f~~~~~~-~~~~i~~i~~~~g~lWigt~-------~Gl~~~~~~~~~~~~~~ 137 (758)
T 3ott_A 73 NTYLYMGTD-------NGILVYNYRADRYEQPETD-FPTDVRTMALQGDTLWLGAL-------NGLYTYQLQSRKLTSFD 137 (758)
T ss_dssp TTEEEEEET-------TEEEEEETTTTEECCCSCC-CCSCEEEEEEETTEEEEEET-------TEEEEEETTTCCEEEEC
T ss_pred CCcEEEEeC-------CCeEEEeCCCCEEECcccC-CCceEEEEEecCCcEEEEcC-------CcceeEeCCCCeEEEec
Confidence 567776432 3488999999988652111 11111223345788888532 36889999999887763
Q ss_pred c----ccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCC----CCceeEEEEE-C-CEEEEEe
Q 007704 437 S----MLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNR----RRGCHSLAVL-N-GKLYALG 505 (592)
Q Consensus 437 ~----~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~----~R~~~s~v~~-~-~~Lyv~G 505 (592)
. ++.. .-.+++.- ++.|+|.. . ..+.+||+.++.+..+..... .....+++.- + +.|+|-
T Consensus 138 ~~~~~l~~~-~i~~i~~d~~g~lWigt--~-----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWig- 208 (758)
T 3ott_A 138 TRRNGLPNN-TIYSIIRTKDNQIYVGT--Y-----NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIG- 208 (758)
T ss_dssp HHHHCCSCS-CEEEEEECTTCCEEEEE--T-----TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEE-
T ss_pred cCCCCcCCC-eEEEEEEcCCCCEEEEe--C-----CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEE-
Confidence 2 2211 11222222 67888832 1 368899999998876532111 1112333333 2 456763
Q ss_pred cCCCCCCCCeEEEEeCCCCeEEEcC
Q 007704 506 GFDGSAMVPSIEVYDPRLGSWMSGE 530 (592)
Q Consensus 506 G~~~~~~~~~v~~yD~~t~~W~~v~ 530 (592)
-. ..++.||+.+.+++...
T Consensus 209 t~------~Gl~~~~~~~~~~~~~~ 227 (758)
T 3ott_A 209 TE------GYLFQYFPSTGQIKQTE 227 (758)
T ss_dssp EE------EEEEEEETTTTEEEEEE
T ss_pred EC------CCCeEEcCCCCeEEecc
Confidence 21 24889999998887654
No 212
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=90.44 E-value=6.8 Score=42.91 Aligned_cols=119 Identities=13% Similarity=0.105 Sum_probs=70.5
Q ss_pred EEEECCEEEEEecCCCCcccceEEEEeC-CCCe--EEEcccccCc--------ccceEEEEECCEEEEEeccCCCCCCCe
Q 007704 400 GATIDNKIFAIGGGNGLECFSDVEMLDL-DIGK--WIRTRSMLQK--------RFALAAAELNGVLYATGGYDGNEYMNS 468 (592)
Q Consensus 400 ~~~~~~~Iyv~GG~~~~~~~~~v~~yD~-~t~~--W~~i~~~p~~--------R~~~~a~~~~g~IYV~GG~~~~~~~~~ 468 (592)
-++.++.||+.... ...++.+|. .+++ |+.-...... ......++.+++||+... -..
T Consensus 58 P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~ 126 (571)
T 2ad6_A 58 PLVIGDMMYVHSAF-----PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------NGH 126 (571)
T ss_dssp CEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSE
T ss_pred cEEECCEEEEEeCC-----CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------CCE
Confidence 34579999998642 246899998 7764 8764322111 112234567999998643 146
Q ss_pred eEEEeCCCCe--EEEeccC-CCC-CceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCC--eEEEc
Q 007704 469 AERFDPREHY--WTKIANM-NRR-RGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLG--SWMSG 529 (592)
Q Consensus 469 v~~yD~~t~~--W~~i~~~-p~~-R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~--~W~~v 529 (592)
++.+|.++++ |+.-... +.. ....+-++.++.||+-.+......-..++.||..+. .|+.-
T Consensus 127 l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 127 LLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 8999998874 8754221 111 112233456888877543211112357999999875 48753
No 213
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=90.33 E-value=0.9 Score=47.37 Aligned_cols=143 Identities=11% Similarity=0.058 Sum_probs=75.6
Q ss_pred CCEEEEEecCCCCcccceEEEEeCCCCeEEEcccc-cCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEE
Q 007704 404 DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSM-LQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWT 480 (592)
Q Consensus 404 ~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~-p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~ 480 (592)
++.+++.|+.++ .+.+||..+..-...-.+ .....-.+++.. ++.+++.|+.+ ..+-+||++++...
T Consensus 131 ~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D-----~~v~iwd~~~~~~~ 200 (435)
T 4e54_B 131 HPSTVAVGSKGG-----DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME-----GTTRLQDFKGNILR 200 (435)
T ss_dssp CTTCEEEEETTS-----CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS-----SCEEEEETTSCEEE
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC-----CEEEEeeccCCcee
Confidence 345677777553 577888876654332221 111122233332 56677777766 35778999888766
Q ss_pred EeccCCCCC-ceeEEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE---CCEEEEEeccc
Q 007704 481 KIANMNRRR-GCHSLAVL-NGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV---KEAIYVIGGVK 555 (592)
Q Consensus 481 ~i~~~p~~R-~~~s~v~~-~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~---~~~Iyv~GG~~ 555 (592)
.+....... ...++... ++.+++.|+.++ .+.+||..... +..+.........+.+ +..+++.|+.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg-----~i~~wd~~~~~---~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSASSRMVVTGDNVG-----NVILLNMDGKE---LWNLRMHKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp EEECCSSCSCCCCCEEEETTTTEEEEECSSS-----BEEEEESSSCB---CCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred EEeccCCCCccEEEEEECCCCCEEEEEeCCC-----cEeeeccCcce---eEEEecccceEEeeeecCCCceEEEEecCc
Confidence 554332222 12223333 777888888654 57888876542 2222221222223333 23466677754
Q ss_pred CCCccccEEEEEcCC
Q 007704 556 NGSEIVDTVERFKEG 570 (592)
Q Consensus 556 ~~~~~~~~v~~Yd~~ 570 (592)
+ .|.+||..
T Consensus 273 ~------~v~iwd~~ 281 (435)
T 4e54_B 273 Q------TVKIWDLR 281 (435)
T ss_dssp S------BCCEEETT
T ss_pred c------eeeEEecc
Confidence 3 35666653
No 214
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=90.30 E-value=17 Score=37.03 Aligned_cols=199 Identities=13% Similarity=0.133 Sum_probs=106.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCC---CC--------------CCcceEEEEE---CCEEEEEecCCCC
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSL---NG--------------TKGSLAGATI---DNKIFAIGGGNGL 416 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~l---p~--------------~r~~~~~~~~---~~~Iyv~GG~~~~ 416 (592)
.+.||+.+.. .-+++.+-...+|+.+..+ |. ....++++.. .+.||+..+.
T Consensus 128 ~~~l~~g~~~------ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~--- 198 (394)
T 3b7f_A 128 PGTWYAGTSP------QGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS--- 198 (394)
T ss_dssp TTCEEEEEET------TEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET---
T ss_pred CCEEEEEecC------CcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC---
Confidence 4667765431 3488888888899987432 11 1122333332 3568876431
Q ss_pred cccceEEEEeCCCCeEEEcccc------cCc-----ccceEEEEE---CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEe
Q 007704 417 ECFSDVEMLDLDIGKWIRTRSM------LQK-----RFALAAAEL---NGVLYATGGYDGNEYMNSAERFDPREHYWTKI 482 (592)
Q Consensus 417 ~~~~~v~~yD~~t~~W~~i~~~------p~~-----R~~~~a~~~---~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i 482 (592)
..+++.+-...+|+.+..- |.+ ...++++.. .+.||+..+ ..+++.+-...+|+.+
T Consensus 199 ---ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~-------~gl~~s~D~G~tW~~~ 268 (394)
T 3b7f_A 199 ---GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH-------CGIYRMDRREGVWKRI 268 (394)
T ss_dssp ---BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET-------TEEEEEETTTTEEECG
T ss_pred ---CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC-------CeEEEeCCCCCcceEC
Confidence 2477777778899987531 211 223344433 267777432 4588888888999998
Q ss_pred cc-CCCC--CceeEEEEE---CCEEEEEecCCCC-------CCCCeEEEEeCCCCeEEEcC-CCCCCCcc-----eEEEE
Q 007704 483 AN-MNRR--RGCHSLAVL---NGKLYALGGFDGS-------AMVPSIEVYDPRLGSWMSGE-PMKLSRGY-----LGAAV 543 (592)
Q Consensus 483 ~~-~p~~--R~~~s~v~~---~~~Lyv~GG~~~~-------~~~~~v~~yD~~t~~W~~v~-~lp~~R~~-----~s~~v 543 (592)
.. ++.. ....+++.. .+.||+....... .....+++-.-.-.+|+.+. .+|....+ ..+++
T Consensus 269 ~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~ 348 (394)
T 3b7f_A 269 GDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTA 348 (394)
T ss_dssp GGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEE
T ss_pred CCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEE
Confidence 64 4432 333444442 4668876311000 01123443332336899875 35543211 22333
Q ss_pred E--C-CEEEEEecccCCCccccEEEEEcCC-CcEEEccc-cCC
Q 007704 544 V--K-EAIYVIGGVKNGSEIVDTVERFKEG-QGWEEINS-RAI 581 (592)
Q Consensus 544 ~--~-~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~W~~v~~-~p~ 581 (592)
- + +.||+ |+.. ..|++-+-. .+|+.+.. +|.
T Consensus 349 ~p~~~~~l~~-g~~~------g~l~~S~D~G~tW~~~~~~lp~ 384 (394)
T 3b7f_A 349 DAHAPVGVYF-GTTG------GEIWASADEGEHWQCIASHLPH 384 (394)
T ss_dssp CCSSSCCEEE-ECTT------SCEEEESSTTSBCEEEECSCSC
T ss_pred CCCCCCEEEE-EeCC------CeEEEECCCCCCceEcccCCCC
Confidence 2 2 34665 5422 237766665 89999854 453
No 215
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=90.29 E-value=1.2 Score=43.53 Aligned_cols=170 Identities=13% Similarity=0.143 Sum_probs=81.9
Q ss_pred ceEEEEECCCCeEEECCCCCCCCcceEEEE-ECCE-EEEEecCCCCcccceEEEEeCCCCeEEEcccccC-cccceEEEE
Q 007704 373 NTVESYSPANDEWTSRPSLNGTKGSLAGAT-IDNK-IFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQ-KRFALAAAE 449 (592)
Q Consensus 373 ~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~-Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~-~R~~~~a~~ 449 (592)
+.+++||..+.+....-... ...+.++. -+++ ||+.+ ..+++||+.+++-...-+... .+. .....
T Consensus 115 ~~i~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~--------~~i~~~d~~~~~~~~~~~~~~~~~~-~~~s~ 183 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEAP--RQITMLAWARDGSKLYGLG--------RDLHVMDPEAGTLVEDKPIQSWEAE-TYAQP 183 (337)
T ss_dssp CEEEEEETTTTEEEEEEECC--SSCCCEEECTTSSCEEEES--------SSEEEEETTTTEEEEEECSTTTTTT-TBCCC
T ss_pred ceEEEEECCCCcEEEEEeCC--CCcceeEECCCCCEEEEeC--------CeEEEEECCCCcEeeeeeccccCCC-ceeCC
Confidence 67999999987764331111 11222232 2454 66652 469999999887543211111 110 01111
Q ss_pred ECCEEEEEecc-------------CCC-----CCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CC-EEEEEecCCC
Q 007704 450 LNGVLYATGGY-------------DGN-----EYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NG-KLYALGGFDG 509 (592)
Q Consensus 450 ~~g~IYV~GG~-------------~~~-----~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~-~Lyv~GG~~~ 509 (592)
-+..+|+.+.. .+. .....++++|+.+++-..+...+......+++.. ++ .||+..
T Consensus 184 dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~---- 259 (337)
T 1pby_B 184 DVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAY---- 259 (337)
T ss_dssp BCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEEE----
T ss_pred CccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEeC----
Confidence 12223322211 100 0112578999998875533222222222223333 44 455541
Q ss_pred CCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CC-EEEEEecccCCCccccEEEEEcCC
Q 007704 510 SAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KE-AIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 510 ~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~-~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
..+.+||+.+.+-...-.. +....+++.. ++ .+|+ ++.+ +.|.+||+.
T Consensus 260 ----~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~-~~~~------~~i~v~d~~ 309 (337)
T 1pby_B 260 ----NVLESFDLEKNASIKRVPL--PHSYYSVNVSTDGSTVWL-GGAL------GDLAAYDAE 309 (337)
T ss_dssp ----SEEEEEETTTTEEEEEEEC--SSCCCEEEECTTSCEEEE-ESBS------SEEEEEETT
T ss_pred ----CeEEEEECCCCcCcceecC--CCceeeEEECCCCCEEEE-EcCC------CcEEEEECc
Confidence 5799999988764332211 2222344443 34 4555 4432 569999986
No 216
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=90.23 E-value=4.4 Score=44.49 Aligned_cols=184 Identities=11% Similarity=-0.015 Sum_probs=95.6
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE-CC-EEEEEecCCCCcccceEEEEeCC--CCeE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI-DN-KIFAIGGGNGLECFSDVEMLDLD--IGKW 432 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~-~Iyv~GG~~~~~~~~~v~~yD~~--t~~W 432 (592)
++.+||....+ +.+.++|..+++-... ++....-|.++.. ++ .+|+.+ . ...+.+||+. +.
T Consensus 166 ~~~~~V~~~~~-----~~V~viD~~t~~v~~~--i~~g~~p~~v~~SpDGr~lyv~~-~-----dg~V~viD~~~~t~-- 230 (567)
T 1qks_A 166 ENLFSVTLRDA-----GQIALIDGSTYEIKTV--LDTGYAVHISRLSASGRYLFVIG-R-----DGKVNMIDLWMKEP-- 230 (567)
T ss_dssp GGEEEEEETTT-----TEEEEEETTTCCEEEE--EECSSCEEEEEECTTSCEEEEEE-T-----TSEEEEEETTSSSC--
T ss_pred CceEEEEeCCC-----CeEEEEECCCCeEEEE--EeCCCCccceEECCCCCEEEEEc-C-----CCeEEEEECCCCCC--
Confidence 45677765433 5799999998765421 2222222333332 44 567654 2 2479999995 44
Q ss_pred EEcccccCcccceEEEEE-----CC-EEEEEeccCCCCCCCeeEEEeCCCCeEEEe-c--cC--------CCCCceeEEE
Q 007704 433 IRTRSMLQKRFALAAAEL-----NG-VLYATGGYDGNEYMNSAERFDPREHYWTKI-A--NM--------NRRRGCHSLA 495 (592)
Q Consensus 433 ~~i~~~p~~R~~~~a~~~-----~g-~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i-~--~~--------p~~R~~~s~v 495 (592)
+.+..++....-..++.. +| .+|+..-. .+.+.++|..+.+=... + .+ |.+|.....+
T Consensus 231 ~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~-----~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~ 305 (567)
T 1qks_A 231 TTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYW-----PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILA 305 (567)
T ss_dssp CEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE-----TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEE
T ss_pred cEeEEEecCCCCceeEEccccCCCCCEEEEEEcc-----CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEE
Confidence 333333333222233333 44 56666432 25678899877653332 1 11 1234333222
Q ss_pred EECCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCE-EEEEecccCCCccccEEEEEcCC
Q 007704 496 VLNGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEA-IYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 496 ~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~-Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
..++..+++-- .....++..|........+..++..+..|....- +++ +|+.... .+.|.++|.+
T Consensus 306 s~~~~~~vv~~----~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~------sn~V~ViD~~ 372 (567)
T 1qks_A 306 SHYRPEFIVNV----KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANA------RNKLVVIDTK 372 (567)
T ss_dssp CSSSSEEEEEE----TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGG------GTEEEEEETT
T ss_pred cCCCCEEEEEe----cCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCC------CCeEEEEECC
Confidence 22333344321 2245788888877655555445555665655443 344 3333322 2668888876
No 217
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=90.16 E-value=9 Score=36.51 Aligned_cols=147 Identities=16% Similarity=0.127 Sum_probs=81.7
Q ss_pred ceEEEEECCEEEEEeeCCCCCCcceEEEEECCCCe-E--EEC----CCCCCCCcceEEEE-ECCEEEEEecCCCCcccce
Q 007704 350 YASAAMLNGELYIFGGGDGNSWHNTVESYSPANDE-W--TSR----PSLNGTKGSLAGAT-IDNKIFAIGGGNGLECFSD 421 (592)
Q Consensus 350 ~~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~-W--~~l----~~lp~~r~~~~~~~-~~~~Iyv~GG~~~~~~~~~ 421 (592)
.-+++..++++|+|=| +.+|+++..... . ..+ +.+|. ....+... .++++|+|-| +.
T Consensus 33 ~DAi~~~~g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~~wp~lp~-~IDAA~~~~~~~k~yfFkG-------~~ 97 (218)
T 1gen_A 33 FDGIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPE-KIDAVYEAPQEEKAVFFAG-------NE 97 (218)
T ss_dssp CSEEEEETTEEEEEET-------TEEEEESSTTSCCEEEEEGGGTCTTSCS-CCSEEEEETTTTEEEEEET-------TE
T ss_pred EeEEEeCCCcEEEEEC-------CEEEEEeCCCCccCCCEEHHHhcCCCCC-CccEEEEECCCCEEEEEeC-------CE
Confidence 3455667999999988 557777655421 1 122 22332 22222222 2689999987 67
Q ss_pred EEEEeCCCCeE---EEcccccCcc---cceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEE-----ec-cC-C
Q 007704 422 VEMLDLDIGKW---IRTRSMLQKR---FALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTK-----IA-NM-N 486 (592)
Q Consensus 422 v~~yD~~t~~W---~~i~~~p~~R---~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~-----i~-~~-p 486 (592)
+|+||..+..- +.+..+..+. .--++... ++++|+|-| +..|+||..++.-.. +. .. .
T Consensus 98 yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d~~~~~v~~gyPr~i~~~w~g 170 (218)
T 1gen_A 98 YWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNA 170 (218)
T ss_dssp EEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCEEHHHHSSS
T ss_pred EEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEECccccccCCCCcchhhccCC
Confidence 89998531100 1122211111 12333332 689999988 568999987764321 11 01 1
Q ss_pred CCCceeEEEEEC--CEEEEEecCCCCCCCCeEEEEeCCCCe
Q 007704 487 RRRGCHSLAVLN--GKLYALGGFDGSAMVPSIEVYDPRLGS 525 (592)
Q Consensus 487 ~~R~~~s~v~~~--~~Lyv~GG~~~~~~~~~v~~yD~~t~~ 525 (592)
.+....++...+ +.+|.|-| +..|.||..+..
T Consensus 171 ~p~~idaAf~~~~~g~~YfFkg-------~~y~~~~~~~~~ 204 (218)
T 1gen_A 171 IPDNLDAVVDLQGGGHSYFFKG-------AYYLKLENQSLK 204 (218)
T ss_dssp CCSSCSEEEECTTTCEEEEEET-------TEEEEEETTEEE
T ss_pred CCCCCCEEEEEcCCCcEEEEEC-------CEEEEEECCcee
Confidence 122233444444 89999977 468889876554
No 218
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=89.66 E-value=27 Score=38.22 Aligned_cols=119 Identities=17% Similarity=0.188 Sum_probs=68.4
Q ss_pred eEEEEECCEEEEEeeCCCCCCcceEEEEECCCC--eEEECCCCCCC---C---cceEEEEECCEEEEEecCCCCcccceE
Q 007704 351 ASAAMLNGELYIFGGGDGNSWHNTVESYSPAND--EWTSRPSLNGT---K---GSLAGATIDNKIFAIGGGNGLECFSDV 422 (592)
Q Consensus 351 ~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~--~W~~l~~lp~~---r---~~~~~~~~~~~Iyv~GG~~~~~~~~~v 422 (592)
.+.++.++.||+.+.. +.++.+|..++ .|+.-...+.. . ...+.+..+++||+... ...+
T Consensus 62 ~~P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~------dg~l 129 (582)
T 1flg_A 62 SQAIVSDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL------DASV 129 (582)
T ss_dssp CCCEEETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET------TTEE
T ss_pred eccEEECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC------CCEE
Confidence 3446679999998663 23999999876 48764332211 1 11234567889888532 2478
Q ss_pred EEEeCCCCe--EEEcccccCcc--cceEEEEECC------EEEEEeccCCCCCCCeeEEEeCCCCe--EEE
Q 007704 423 EMLDLDIGK--WIRTRSMLQKR--FALAAAELNG------VLYATGGYDGNEYMNSAERFDPREHY--WTK 481 (592)
Q Consensus 423 ~~yD~~t~~--W~~i~~~p~~R--~~~~a~~~~g------~IYV~GG~~~~~~~~~v~~yD~~t~~--W~~ 481 (592)
+.+|..|++ |+.-..-+... ...+-++.++ .+|+-...........++.||+++++ |+.
T Consensus 130 ~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 130 VALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred EEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeec
Confidence 999998875 87532211111 1122234555 66653211111223578999998765 965
No 219
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=89.65 E-value=12 Score=36.13 Aligned_cols=181 Identities=15% Similarity=0.066 Sum_probs=93.6
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCC----CCcceEEEEECCEEEEE----ecCC--------CCcccc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNG----TKGSLAGATIDNKIFAI----GGGN--------GLECFS 420 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~----~r~~~~~~~~~~~Iyv~----GG~~--------~~~~~~ 420 (592)
++++|+..... ..+++||+.+++...+..... .+....++.-+|++|+. |... ......
T Consensus 79 dg~l~v~~~~~-----~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~ 153 (296)
T 3e5z_A 79 QGHLIACSHGL-----RRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGR 153 (296)
T ss_dssp TCCEEEEETTT-----TEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSC
T ss_pred CCcEEEEecCC-----CeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCc
Confidence 67787765322 468999998888766532111 11122223337889986 4311 011134
Q ss_pred eEEEEeCCCCeEEEcc-cccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCC-CCeE-E--EeccCCCCCceeEE
Q 007704 421 DVEMLDLDIGKWIRTR-SMLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPR-EHYW-T--KIANMNRRRGCHSL 494 (592)
Q Consensus 421 ~v~~yD~~t~~W~~i~-~~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~-t~~W-~--~i~~~p~~R~~~s~ 494 (592)
.++.||+. ++...+. .+..+ ...+.. ++++++.+.. ...+++||+. ++.. . .+-...... -.++
T Consensus 154 ~l~~~~~~-g~~~~~~~~~~~~---~gi~~s~dg~~lv~~~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~~-p~~i 223 (296)
T 3e5z_A 154 WVFRLAPD-GTLSAPIRDRVKP---NGLAFLPSGNLLVSDTG-----DNATHRYCLNARGETEYQGVHFTVEPGK-TDGL 223 (296)
T ss_dssp EEEEECTT-SCEEEEECCCSSE---EEEEECTTSCEEEEETT-----TTEEEEEEECSSSCEEEEEEEECCSSSC-CCSE
T ss_pred EEEEECCC-CCEEEeecCCCCC---ccEEECCCCCEEEEeCC-----CCeEEEEEECCCCcCcCCCeEeeCCCCC-CCeE
Confidence 79999987 5554432 11111 222222 5665544432 2578899886 4555 2 111111111 1123
Q ss_pred EEE-CCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE--C-CEEEEEecccCCCccccEEEEEcCC
Q 007704 495 AVL-NGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV--K-EAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 495 v~~-~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~--~-~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+.- ++.||+..+ ..+.+||+.......+. .+.. ..+++.- + +.||+... +.+++|+++
T Consensus 224 ~~d~~G~l~v~~~-------~~v~~~~~~g~~~~~~~-~~~~--~~~~~f~~~d~~~L~v~t~--------~~l~~~~~~ 285 (296)
T 3e5z_A 224 RVDAGGLIWASAG-------DGVHVLTPDGDELGRVL-TPQT--TSNLCFGGPEGRTLYMTVS--------TEFWSIETN 285 (296)
T ss_dssp EEBTTSCEEEEET-------TEEEEECTTSCEEEEEE-CSSC--CCEEEEESTTSCEEEEEET--------TEEEEEECS
T ss_pred EECCCCCEEEEcC-------CeEEEECCCCCEEEEEE-CCCC--ceeEEEECCCCCEEEEEcC--------CeEEEEEcc
Confidence 332 788888762 46999999865555443 2222 2233332 2 35777543 348888875
No 220
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=89.61 E-value=1 Score=44.47 Aligned_cols=148 Identities=16% Similarity=0.138 Sum_probs=75.4
Q ss_pred CCEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEE-C-CEEEEEeccCCCCCCCeeEEEeCCCCeEEE
Q 007704 404 DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAEL-N-GVLYATGGYDGNEYMNSAERFDPREHYWTK 481 (592)
Q Consensus 404 ~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~-~-g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~ 481 (592)
++++|+.++.+ ..++++|+.+++....-..+....-+.++.. + +.+|+.+..+ ..+++||+.++....
T Consensus 10 ~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~-----~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 10 GHEYMIVTNYP-----NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY-----GDIYGIDLDTCKNTF 79 (349)
T ss_dssp TCEEEEEEETT-----TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEE
T ss_pred CCEEEEEeCCC-----CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCC-----CcEEEEeCCCCcEEE
Confidence 67788887643 5789999999876543222221012233333 3 4578776432 578999999887654
Q ss_pred eccCCC-----CCceeEEEEE-CC-EEEEEecC---CCC---CCCCeEEEEeCCCCeEEE-cCCCCCCCcceEEEEE-CC
Q 007704 482 IANMNR-----RRGCHSLAVL-NG-KLYALGGF---DGS---AMVPSIEVYDPRLGSWMS-GEPMKLSRGYLGAAVV-KE 546 (592)
Q Consensus 482 i~~~p~-----~R~~~s~v~~-~~-~Lyv~GG~---~~~---~~~~~v~~yD~~t~~W~~-v~~lp~~R~~~s~~v~-~~ 546 (592)
.-..+. ....+.++.- ++ .||+.+.. ... .....+.+||+.++.-.. +.....++...+++.. ++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg 159 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 159 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTS
T ss_pred EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCC
Confidence 322221 1111223332 44 45554421 000 012579999987643111 1111222333333333 56
Q ss_pred EEEEEecccCCCccccEEEEEcCC
Q 007704 547 AIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 547 ~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
++|+.+ .++++||+.
T Consensus 160 ~l~~~~---------~~i~~~d~~ 174 (349)
T 1jmx_B 160 SLYVAG---------PDIYKMDVK 174 (349)
T ss_dssp CEEEES---------SSEEEECTT
T ss_pred cEEEcc---------CcEEEEeCC
Confidence 677632 228889876
No 221
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=89.61 E-value=17 Score=35.96 Aligned_cols=204 Identities=10% Similarity=0.075 Sum_probs=91.0
Q ss_pred CCE-EEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCE-EEEEecCCCCcccceEEEEeCCCCe-EE
Q 007704 357 NGE-LYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNK-IFAIGGGNGLECFSDVEMLDLDIGK-WI 433 (592)
Q Consensus 357 ~~~-Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~-Iyv~GG~~~~~~~~~v~~yD~~t~~-W~ 433 (592)
+++ ||+.+..++....-.+|.+|..+++...+...+...........+++ ||+.+.. ...+.+|+..++. ..
T Consensus 60 dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~-----~~~v~~~~~~~~g~~~ 134 (361)
T 3scy_A 60 DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTTNGKNIVTANYS-----GGSITVFPIGQDGALL 134 (361)
T ss_dssp TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEECSSEEEEEETT-----TTEEEEEEBCTTSCBC
T ss_pred CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEECCCEEEEEECC-----CCEEEEEEeCCCCcCc
Confidence 444 66555432111122346667776777766544322212222222655 5655422 2467888876432 11
Q ss_pred Ecc-------cccC-----cccceEEEEE-CC-EEEEEeccCCCCCCCeeEEEeCCCCe-------EEE-----eccCCC
Q 007704 434 RTR-------SMLQ-----KRFALAAAEL-NG-VLYATGGYDGNEYMNSAERFDPREHY-------WTK-----IANMNR 487 (592)
Q Consensus 434 ~i~-------~~p~-----~R~~~~a~~~-~g-~IYV~GG~~~~~~~~~v~~yD~~t~~-------W~~-----i~~~p~ 487 (592)
.+. .-+. ....|.++.. ++ .+|+.+..+ +.+.+|+..... ... ....+.
T Consensus 135 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~-----~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 209 (361)
T 3scy_A 135 PASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGT-----DQIHKFNINPNANADNKEKFLTKGTPEAFKVAP 209 (361)
T ss_dssp SCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTT-----TEEEEEEECTTCCTTTCCCCEEEEEEEEEECCT
T ss_pred ccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCC-----CEEEEEEEcCCCCcccccceeecccccceecCC
Confidence 110 0011 0111333333 44 577765322 456777655433 211 111122
Q ss_pred CCceeEEEEE-CC-EEEEEecCCCCCCCCeEEEEeCCCCeEEEcC---CCCCCCcceEEEEE--CCE-EEEEecccCCCc
Q 007704 488 RRGCHSLAVL-NG-KLYALGGFDGSAMVPSIEVYDPRLGSWMSGE---PMKLSRGYLGAAVV--KEA-IYVIGGVKNGSE 559 (592)
Q Consensus 488 ~R~~~s~v~~-~~-~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~---~lp~~R~~~s~~v~--~~~-Iyv~GG~~~~~~ 559 (592)
...-..++.. ++ .||+.+.. .+.+.+||..++.++.+. ..+........+.+ +++ ||+.+.. +.
T Consensus 210 ~~~~~~~~~spdg~~l~v~~~~-----~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~-~~-- 281 (361)
T 3scy_A 210 GSGPRHLIFNSDGKFAYLINEI-----GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRL-KA-- 281 (361)
T ss_dssp TCCEEEEEECTTSSEEEEEETT-----TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECS-SS--
T ss_pred CCCCeEEEEcCCCCEEEEEcCC-----CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCC-CC--
Confidence 2112223322 55 57776532 246888888887775543 23322222223333 444 5554332 11
Q ss_pred cccEEEEEcC--C-CcEEEccccC
Q 007704 560 IVDTVERFKE--G-QGWEEINSRA 580 (592)
Q Consensus 560 ~~~~v~~Yd~--~-~~W~~v~~~p 580 (592)
+.+.+|+. . ..+..+...+
T Consensus 282 --~~i~v~~~~~~~g~~~~~~~~~ 303 (361)
T 3scy_A 282 --DGVAIFKVDETNGTLTKVGYQL 303 (361)
T ss_dssp --CEEEEEEECTTTCCEEEEEEEE
T ss_pred --CEEEEEEEcCCCCcEEEeeEec
Confidence 34666654 3 5666554433
No 222
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=89.59 E-value=1.6 Score=45.47 Aligned_cols=105 Identities=10% Similarity=0.121 Sum_probs=53.3
Q ss_pred CCE-EEEEecCCCCcccceEEEEeCCCC---eEEE--ccccc-CcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeC
Q 007704 404 DNK-IFAIGGGNGLECFSDVEMLDLDIG---KWIR--TRSML-QKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDP 474 (592)
Q Consensus 404 ~~~-Iyv~GG~~~~~~~~~v~~yD~~t~---~W~~--i~~~p-~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~ 474 (592)
++. +++.|+.+ ..+.+||+.+. .+.. ...+. ....-.+++.. ++.+++.|+.+ ..+.+||+
T Consensus 192 ~~~~~l~s~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-----g~i~i~d~ 261 (430)
T 2xyi_A 192 NLNGYLLSASDD-----HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-----QKLMIWDT 261 (430)
T ss_dssp TSTTEEEEECTT-----SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEET
T ss_pred CCCCeEEEEeCC-----CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-----CeEEEEEC
Confidence 344 77777654 36788888762 1211 11111 11112223322 56677777654 46889998
Q ss_pred CCCe-EEEeccCCCCCceeEEEEE--CC-EEEEEecCCCCCCCCeEEEEeCCC
Q 007704 475 REHY-WTKIANMNRRRGCHSLAVL--NG-KLYALGGFDGSAMVPSIEVYDPRL 523 (592)
Q Consensus 475 ~t~~-W~~i~~~p~~R~~~s~v~~--~~-~Lyv~GG~~~~~~~~~v~~yD~~t 523 (592)
.+.. ...+..+.........+.+ ++ .+++.|+.++ .+.+||..+
T Consensus 262 ~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg-----~v~vwd~~~ 309 (430)
T 2xyi_A 262 RNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK-----TVALWDLRN 309 (430)
T ss_dssp TCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS-----EEEEEETTC
T ss_pred CCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCC-----eEEEEeCCC
Confidence 8652 1111111111112223333 23 4888888653 588899876
No 223
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=89.43 E-value=6.3 Score=44.37 Aligned_cols=130 Identities=10% Similarity=0.156 Sum_probs=73.0
Q ss_pred CCEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCc-ccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEE
Q 007704 404 DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQK-RFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWT 480 (592)
Q Consensus 404 ~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~-R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~ 480 (592)
++.||++||.. .-+.+||+.+++++....-... .....+... +|.|++... ..+.+||+.++.++
T Consensus 482 ~g~lWi~~~t~-----~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt~-------~Gl~~~~~~~~~~~ 549 (758)
T 3ott_A 482 EGNVWVLLYNN-----KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGFH-------GGVMRINPKDESQQ 549 (758)
T ss_dssp TSCEEEEETTC-----SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEET-------TEEEEECC--CCCC
T ss_pred CCCEEEEccCC-----CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEec-------CceEEEecCCCceE
Confidence 57898866532 3588999999999876321111 111122222 577886431 35899999988876
Q ss_pred Eec--cCCCCCceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecccC
Q 007704 481 KIA--NMNRRRGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV--KEAIYVIGGVKN 556 (592)
Q Consensus 481 ~i~--~~p~~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~--~~~Iyv~GG~~~ 556 (592)
... .++. ....+++.-++.|++... +.+.+||+.+.+.+... ++..... .++.. ++.|| |||.++
T Consensus 550 ~~~~~gl~~-~~i~~i~~~~g~lWi~t~-------~Gl~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~G~l~-fG~~~G 618 (758)
T 3ott_A 550 SISFGSFSN-NEILSMTCVKNSIWVSTT-------NGLWIIDRKTMDARQQN-MTNKRFT-SLLFDPKEDCVY-LGGADG 618 (758)
T ss_dssp BCCCCC----CCEEEEEEETTEEEEEES-------SCEEEEETTTCCEEEC---CCCCCS-EEEEETTTTEEE-EECBSE
T ss_pred EecccCCCc-cceEEEEECCCCEEEECC-------CCeEEEcCCCceeEEec-CCCCcee-eeEEECCCCcEE-EecCCc
Confidence 553 2332 223444445888888653 34889999998887653 2332222 23323 45555 577643
No 224
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=89.30 E-value=16 Score=39.89 Aligned_cols=198 Identities=11% Similarity=0.042 Sum_probs=103.1
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECC--CCeEEECCCCCCCCcceEEEEE-----CC-EEEEEecCCCCcccceEEEEeCC
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPA--NDEWTSRPSLNGTKGSLAGATI-----DN-KIFAIGGGNGLECFSDVEMLDLD 428 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~--t~~W~~l~~lp~~r~~~~~~~~-----~~-~Iyv~GG~~~~~~~~~v~~yD~~ 428 (592)
+..+|+.+ .+ +.+..||+. +.+- +..++....-..++.. ++ .+|+..- ..+.+.++|..
T Consensus 208 Gr~lyv~~-~d-----g~V~viD~~~~t~~~--v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~-----~~~~v~ViD~~ 274 (567)
T 1qks_A 208 GRYLFVIG-RD-----GKVNMIDLWMKEPTT--VAEIKIGSEARSIETSKMEGWEDKYAIAGAY-----WPPQYVIMDGE 274 (567)
T ss_dssp SCEEEEEE-TT-----SEEEEEETTSSSCCE--EEEEECCSEEEEEEECCSTTCTTTEEEEEEE-----ETTEEEEEETT
T ss_pred CCEEEEEc-CC-----CeEEEEECCCCCCcE--eEEEecCCCCceeEEccccCCCCCEEEEEEc-----cCCeEEEEECC
Confidence 34567653 22 469999995 4432 2222222222233333 55 4666532 34678889987
Q ss_pred CCeEEEc-c--cc--------cCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE
Q 007704 429 IGKWIRT-R--SM--------LQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL 497 (592)
Q Consensus 429 t~~W~~i-~--~~--------p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~ 497 (592)
|.+=... + .+ |.+|.....+..++..+++.- .....+++.|..+.....+...+..+.-|....-
T Consensus 275 t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~----~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~ 350 (567)
T 1qks_A 275 TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV----KETGKILLVDYTDLNNLKTTEISAERFLHDGGLD 350 (567)
T ss_dssp TCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE----TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEEC
T ss_pred CCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe----cCCCeEEEEecCCCccceeeeeeccccccCceEC
Confidence 7653321 1 11 122333222222333333321 1235788888887766666556666766665544
Q ss_pred -CCE-EEEEecCCCCCCCCeEEEEeCCCCeEEE---c-CCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 498 -NGK-LYALGGFDGSAMVPSIEVYDPRLGSWMS---G-EPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 498 -~~~-Lyv~GG~~~~~~~~~v~~yD~~t~~W~~---v-~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+++ +|+... ..+.|.++|+.+++-.. + +..|.|..+.....- ++.+|+.+-..+ ++|-++|..
T Consensus 351 pdgr~~~va~~-----~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~-----~~Vsvid~~ 420 (567)
T 1qks_A 351 GSHRYFITAAN-----ARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGD-----DSVALIGTD 420 (567)
T ss_dssp TTSCEEEEEEG-----GGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSS-----SEEEEEECC
T ss_pred CCCCEEEEEeC-----CCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCC-----CeEEEecCC
Confidence 444 444432 24679999999886432 4 455666333332222 356777654322 457777754
Q ss_pred -C-----cEEEccccCC
Q 007704 571 -Q-----GWEEINSRAI 581 (592)
Q Consensus 571 -~-----~W~~v~~~p~ 581 (592)
. .|..+..++.
T Consensus 421 ~~~~~~~~~kvv~~i~~ 437 (567)
T 1qks_A 421 PEGHPDNAWKILDSFPA 437 (567)
T ss_dssp TTTCTTTBTSEEEEEEC
T ss_pred CCCCccccCEEEEEEec
Confidence 2 2877655443
No 225
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=89.19 E-value=14 Score=38.07 Aligned_cols=148 Identities=15% Similarity=0.062 Sum_probs=84.3
Q ss_pred eEEEEECCEEEEEeeCCCCCCcceEEEEECCCCeE--EEC----CCCCCCCcceEEEEE--CCEEEEEecCCCCcccceE
Q 007704 351 ASAAMLNGELYIFGGGDGNSWHNTVESYSPANDEW--TSR----PSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDV 422 (592)
Q Consensus 351 ~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W--~~l----~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v 422 (592)
-+++.+++++|+|=| +.+|+++.....- ..+ +.+|. ... ++... ++++|+|-| +.+
T Consensus 184 DAv~~~~g~~~fFkg-------~~~Wr~~~~~~~~~p~~I~~~wpgLP~-~iD-Aa~~~~~~g~~~fFkg-------~~y 247 (365)
T 3ba0_A 184 DAVTTVGNKIFFFKD-------RFFWLKVSERPKTSVNLISSLWPTLPS-GIE-AAYEIEARNQVFLFKD-------DKY 247 (365)
T ss_dssp SCEEEETTEEEEEET-------TEEEECCSSCCCCCEEEHHHHCSSCCS-SCC-EEEEEGGGTEEEEEET-------TEE
T ss_pred eeEEEcCCeEEEEeC-------CEEEEEcCCCccCCccchhhhccCCCC-Ccc-EEEEecCCCEEEEEeC-------CEE
Confidence 345567999999988 4577776543211 111 22332 222 23333 799999977 567
Q ss_pred EEEeCCCCe--E-EEcccccCcc---cceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEE-----ecc-C-CC
Q 007704 423 EMLDLDIGK--W-IRTRSMLQKR---FALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTK-----IAN-M-NR 487 (592)
Q Consensus 423 ~~yD~~t~~--W-~~i~~~p~~R---~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~-----i~~-~-p~ 487 (592)
|+|+..+.. + +.+..+..|. .--++... ++++|+|-| +..|+||..+.+-.. +.. . ..
T Consensus 248 Wr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG-------~~yw~yd~~~~~v~~gyPk~I~~~f~g~ 320 (365)
T 3ba0_A 248 WLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD-------NQYWRYDERRQMMDPGYPKLITKNFQGI 320 (365)
T ss_dssp EECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCCCHHHHSTTC
T ss_pred EEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCCcceecCCCCcchhhcCCCC
Confidence 787654211 1 2333321122 22233333 589999987 578999987654322 100 1 11
Q ss_pred CCceeEEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCeEEE
Q 007704 488 RRGCHSLAVL-NGKLYALGGFDGSAMVPSIEVYDPRLGSWMS 528 (592)
Q Consensus 488 ~R~~~s~v~~-~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~ 528 (592)
+....+++.. ++++|.|-| +..|+||..+.+-..
T Consensus 321 p~~iDaA~~~~~g~~YfFkg-------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 321 GPKIDAVFYSKNKYYYFFQG-------SNQFEYDFLLQRITK 355 (365)
T ss_dssp CSSCSEEEEETTTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred CCccceeeEecCCcEEEEeC-------CEEEEEECCccEEec
Confidence 2223455555 899999977 468999998876544
No 226
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=89.18 E-value=16 Score=37.16 Aligned_cols=146 Identities=10% Similarity=0.066 Sum_probs=79.9
Q ss_pred CCEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEE
Q 007704 404 DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTK 481 (592)
Q Consensus 404 ~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~ 481 (592)
++.+++.|+.+ ..+.+||+.+.+-...-..+.......++.+ ++.+++.|+.+ ..+.+||+.+.....
T Consensus 181 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 181 EKSLLVALTNL-----SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR-----GIIDIWDIRFNVLIR 250 (437)
T ss_dssp SCEEEEEEETT-----SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC-----CeEEEEEcCCccEEE
Confidence 47788888754 4788999988754322111101112222223 67777778765 458899998876543
Q ss_pred eccCCCCCceeEEEEE-----CCEEEEEecCCCCCCCCeEEEEeCCCCeEEEc-C-C---C------C------------
Q 007704 482 IANMNRRRGCHSLAVL-----NGKLYALGGFDGSAMVPSIEVYDPRLGSWMSG-E-P---M------K------------ 533 (592)
Q Consensus 482 i~~~p~~R~~~s~v~~-----~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v-~-~---l------p------------ 533 (592)
.-..+......+++.. ++.+++.|+.++ .+.+||..+..-... . . . |
T Consensus 251 ~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 325 (437)
T 3gre_A 251 SWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKT-----FLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCG 325 (437)
T ss_dssp EEBCTTCEEEEEEEECTTTCTTEEEEEEESTTE-----EEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCC
T ss_pred EEecCCCCceEEEEeccccCCCccEEEEEcCCC-----cEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecc
Confidence 2221221111122111 355666776543 588899887653321 1 0 0 0
Q ss_pred --CCCcceEEEEECCEEEEEecccCCCccccEEEEEcCC
Q 007704 534 --LSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 534 --~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
......+++..++.+++.||.++ .|.+||..
T Consensus 326 ~~~~~~v~~l~~~~~~~l~s~~~d~------~i~~wd~~ 358 (437)
T 3gre_A 326 IRSLNALSTISVSNDKILLTDEATS------SIVMFSLN 358 (437)
T ss_dssp CCSGGGGCCEEEETTEEEEEEGGGT------EEEEEETT
T ss_pred cccCCceEEEEECCceEEEecCCCC------eEEEEECC
Confidence 11112344455788888888764 48888875
No 227
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=89.06 E-value=15 Score=34.35 Aligned_cols=141 Identities=11% Similarity=0.025 Sum_probs=81.0
Q ss_pred EEEEECCEEEEEecCCCCcccceEEEEeCCC--CeEE--Ec----ccccCcccceEEEEE--CCEEEEEeccCCCCCCCe
Q 007704 399 AGATIDNKIFAIGGGNGLECFSDVEMLDLDI--GKWI--RT----RSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNS 468 (592)
Q Consensus 399 ~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t--~~W~--~i----~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~ 468 (592)
+++.++|++|+|=| +.+|+++... .... .+ +.+|. .--++... ++++|+|-| +.
T Consensus 11 Ai~~~~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~--~IDAa~~~~~~~~~yfFkG-------~~ 74 (195)
T 1itv_A 11 AIAEIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADKWPALPR--KLDSVFEEPLSKKLFFFSG-------RQ 74 (195)
T ss_dssp EEEEETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHHCTTSCS--SCSEEEECTTTCCEEEEET-------TE
T ss_pred EEEEeCCEEEEEEC-------CEEEEEECCccccCCCcEEhhhccCCCCC--CccEEEEECCCCeEEEEeC-------CE
Confidence 45567999999977 5678887755 2222 22 23443 22223333 688999988 56
Q ss_pred eEEEeCCCCeE-EEecc--CCCC--CceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCCeEE-----EcC-CCC-CCC
Q 007704 469 AERFDPREHYW-TKIAN--MNRR--RGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLGSWM-----SGE-PMK-LSR 536 (592)
Q Consensus 469 v~~yD~~t~~W-~~i~~--~p~~--R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~-----~v~-~lp-~~R 536 (592)
.|+|+..+..- ..+.. +|.. ..-+++...++++|+|-| +..|+||..+++-. .+. ..+ .|.
T Consensus 75 yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg-------~~ywr~d~~~~~~~~gyPr~i~~~w~Gvp~ 147 (195)
T 1itv_A 75 VWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG-------RRLWRFDVKAQMVDPRSASEVDRMFPGVPL 147 (195)
T ss_dssp EEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET-------TEEEEEETTTTEECGGGCEEHHHHSTTSCS
T ss_pred EEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC-------CEEEEEeCCcccccCCCccChhhcCCCCCC
Confidence 78887543111 11212 2221 222333323789999977 46899998775421 111 111 122
Q ss_pred cceEEEEECCEEEEEecccCCCccccEEEEEcCC
Q 007704 537 GYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 537 ~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
...++...++.+|.|-| +..|.||..
T Consensus 148 ~idaa~~~~g~~Yffkg--------~~y~~~~~~ 173 (195)
T 1itv_A 148 DTHDVFQFREKAYFCQD--------RFYWRVSSR 173 (195)
T ss_dssp SCSEEEEETTEEEEEET--------TEEEEEECC
T ss_pred CCCEEEEeCCeEEEEeC--------CEEEEEECC
Confidence 23345556899999988 458888876
No 228
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=88.97 E-value=21 Score=35.98 Aligned_cols=188 Identities=12% Similarity=0.073 Sum_probs=99.3
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEE-ECCEEEEEecCCCCcccceEEEEeCCCCeEEEc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGAT-IDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRT 435 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i 435 (592)
+++++++++... -..+..+|+.+.+.......... -.+++. -++++++.|+. ..+.+++..++.....
T Consensus 144 Dg~~la~as~~~---d~~i~iwd~~~~~~~~~~~~~~~--V~~v~fspdg~~l~s~s~------~~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 144 EGTVAAIASSKV---PAIMRIIDPSDLTEKFEIETRGE--VKDLHFSTDGKVVAYITG------SSLEVISTVTGSCIAR 212 (365)
T ss_dssp TSSCEEEEESCS---SCEEEEEETTTTEEEEEEECSSC--CCEEEECTTSSEEEEECS------SCEEEEETTTCCEEEE
T ss_pred CCCEEEEEECCC---CCEEEEeECCCCcEEEEeCCCCc--eEEEEEccCCceEEeccc------eeEEEEEeccCcceee
Confidence 666655544221 14688899998876443211111 122222 26777777652 3567788777765432
Q ss_pred ccccCcc--cceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEec--cCCCCCceeEEEEE--CCEEEEEecCCC
Q 007704 436 RSMLQKR--FALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIA--NMNRRRGCHSLAVL--NGKLYALGGFDG 509 (592)
Q Consensus 436 ~~~p~~R--~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~--~~p~~R~~~s~v~~--~~~Lyv~GG~~~ 509 (592)
....... ....+..-++..++.++.++.. ...+..+|.....+.... .+......-.++.+ ++++++.|+.++
T Consensus 213 ~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~ 291 (365)
T 4h5i_A 213 KTDFDKNWSLSKINFIADDTVLIAASLKKGK-GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN 291 (365)
T ss_dssp ECCCCTTEEEEEEEEEETTEEEEEEEESSSC-CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS
T ss_pred eecCCCCCCEEEEEEcCCCCEEEEEecCCcc-eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC
Confidence 2221111 1222233478888887765432 124566776666554332 11111112223333 788899998764
Q ss_pred CCCCCeEEEEeCCCCeEEEcCCCCCC-CcceEEEEE--CCEEEEEecccCCCccccEEEEEcC
Q 007704 510 SAMVPSIEVYDPRLGSWMSGEPMKLS-RGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERFKE 569 (592)
Q Consensus 510 ~~~~~~v~~yD~~t~~W~~v~~lp~~-R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd~ 569 (592)
.|.+||..+.+-.. ..... ......+.+ ++++++.|+.+ .+|.+||+
T Consensus 292 -----~V~iwd~~~~~~~~--~~~~gH~~~V~~v~fSpdg~~laS~S~D------~tvrvw~i 341 (365)
T 4h5i_A 292 -----SIALVKLKDLSMSK--IFKQAHSFAITEVTISPDSTYVASVSAA------NTIHIIKL 341 (365)
T ss_dssp -----CEEEEETTTTEEEE--EETTSSSSCEEEEEECTTSCEEEEEETT------SEEEEEEC
T ss_pred -----EEEEEECCCCcEEE--EecCcccCCEEEEEECCCCCEEEEEeCC------CeEEEEEc
Confidence 58899998865322 11111 111223333 67788877764 46888885
No 229
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=88.91 E-value=8.2 Score=41.08 Aligned_cols=147 Identities=15% Similarity=0.166 Sum_probs=83.8
Q ss_pred ceEEEEECCEEEEEeeCCCCCCcceEEEEECCCCeEEE--C----CCCCCCCcceEEEEE--CCEEEEEecCCCCcccce
Q 007704 350 YASAAMLNGELYIFGGGDGNSWHNTVESYSPANDEWTS--R----PSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSD 421 (592)
Q Consensus 350 ~~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~--l----~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~ 421 (592)
.-+++.+++++|+|-| ..+|+++.....+.. + +.+|.. .. ++... ++++|+|=| +.
T Consensus 265 fDAi~~~~ge~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~Wp~LP~~-iD-Aa~~~~~~g~~~fFKg-------~~ 328 (450)
T 1su3_A 265 FDAITTIRGEVMFFKD-------RFYMRTNPFYPEVELNFISVFWPQLPNG-LE-AAYEFADRDEVRFFKG-------NK 328 (450)
T ss_dssp CSEEEEETTEEEEEET-------TEEEECCTTSSSCEEEEGGGTCTTSCSS-CC-EEEEEGGGTEEEEEET-------TE
T ss_pred cceEEecCCeEEEEeC-------CEEEEEcCCCCcccceehhHhccCCCCC-ee-EEEEEcCCCeEEEEeC-------CE
Confidence 4456678999999988 456666654433321 1 223321 11 22232 689999977 57
Q ss_pred EEEEeCCCCe--E-EEcc---cccC-cccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEE-----Ee----c
Q 007704 422 VEMLDLDIGK--W-IRTR---SMLQ-KRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWT-----KI----A 483 (592)
Q Consensus 422 v~~yD~~t~~--W-~~i~---~~p~-~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~-----~i----~ 483 (592)
+|+|+..+-. + +.+. .+|. +..--++... ++++|+|-| +..|+||..+.+-. .+ +
T Consensus 329 ~W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG-------~~yw~yd~~~~~~~~gYPk~I~~~fp 401 (450)
T 1su3_A 329 YWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAHDFP 401 (450)
T ss_dssp EEEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCSEEHHHHST
T ss_pred EEEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC-------CEEEEEeCCCccccCCCCcchhhcCC
Confidence 7888743210 0 1111 1221 1111223333 689999988 57899997754322 12 1
Q ss_pred cCCCCCceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCCeEEE
Q 007704 484 NMNRRRGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLGSWMS 528 (592)
Q Consensus 484 ~~p~~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~ 528 (592)
.+| ..--+++..++++|.|-| +..|+||..+.+-..
T Consensus 402 gip--~~iDAA~~~~g~~YFFkg-------~~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 402 GIG--HKVDAVFMKDGFFYFFHG-------TRQYKFDPKTKRILT 437 (450)
T ss_dssp TSC--SCCSEEEEETTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred CCC--CCccEEEEcCCeEEEEeC-------CEEEEEECCcceEec
Confidence 222 223345556999999977 468999988776543
No 230
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=88.83 E-value=33 Score=38.09 Aligned_cols=161 Identities=14% Similarity=0.126 Sum_probs=86.7
Q ss_pred CCEEEEEecCCCCcccceEEEEeCCCC--eEEEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCC---e
Q 007704 404 DNKIFAIGGGNGLECFSDVEMLDLDIG--KWIRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREH---Y 478 (592)
Q Consensus 404 ~~~Iyv~GG~~~~~~~~~v~~yD~~t~--~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~---~ 478 (592)
+++..++....+ ...++++++|..+. .|+.+..-...... .....++.||+....+. ....++.+|+.+. .
T Consensus 244 Dg~~l~~~~~~~-~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~-~~~~~g~~l~~~t~~~~--~~~~l~~~d~~~~~~~~ 319 (693)
T 3iuj_A 244 DDRFLLISAANS-TSGNRLYVKDLSQENAPLLTVQGDLDADVS-LVDNKGSTLYLLTNRDA--PNRRLVTVDAANPGPAH 319 (693)
T ss_dssp TSCEEEEEEESS-SSCCEEEEEETTSTTCCCEEEECSSSSCEE-EEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGG
T ss_pred CCCEEEEEEccC-CCCcEEEEEECCCCCCceEEEeCCCCceEE-EEeccCCEEEEEECCCC--CCCEEEEEeCCCCCccc
Confidence 666444432211 12368999998766 67776432222222 23445889999876543 2357899998764 4
Q ss_pred EEEeccCCCCCceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-C-CEEEE-Eeccc
Q 007704 479 WTKIANMNRRRGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-K-EAIYV-IGGVK 555 (592)
Q Consensus 479 W~~i~~~p~~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~-~~Iyv-~GG~~ 555 (592)
|+.+.+-..... .....++.|++..-.++ ...++++|......+.+. +|..........- + +.+++ +.+..
T Consensus 320 ~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g---~~~l~~~d~~g~~~~~l~-~p~~~~~~~~~~~~d~~~l~~~~ss~~ 393 (693)
T 3iuj_A 320 WRDLIPERQQVL--TVHSGSGYLFAEYMVDA---TARVEQFDYEGKRVREVA-LPGLGSVSGFNGKHDDPALYFGFENYA 393 (693)
T ss_dssp CEEEECCCSSCE--EEEEETTEEEEEEEETT---EEEEEEECTTSCEEEEEC-CSSSSEEEECCCCTTCSCEEEEEECSS
T ss_pred cEEEecCCCCEE--EEEEECCEEEEEEEECC---eeEEEEEECCCCeeEEee-cCCCceEEeeecCCCCCEEEEEecCCC
Confidence 887644332222 44444777666543322 346889998866555553 3322111111111 2 23433 23322
Q ss_pred CCCccccEEEEEcCC-CcEEEccc
Q 007704 556 NGSEIVDTVERFKEG-QGWEEINS 578 (592)
Q Consensus 556 ~~~~~~~~v~~Yd~~-~~W~~v~~ 578 (592)
. -..++.||+. ..+..+..
T Consensus 394 t----P~~l~~~d~~~g~~~~l~~ 413 (693)
T 3iuj_A 394 Q----PPTLYRFEPKSGAISLYRA 413 (693)
T ss_dssp S----CCEEEEECTTTCCEEEEEC
T ss_pred C----CCEEEEEECCCCeEEEEEe
Confidence 2 2579999987 66666644
No 231
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=88.82 E-value=18 Score=35.23 Aligned_cols=188 Identities=15% Similarity=0.072 Sum_probs=93.9
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEE-ECCEEEEEecCCCCcccceEEEEeCCCCeEEEc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGAT-IDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRT 435 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i 435 (592)
++.||+.+-.+ +.+++|++ +........ +.. .....+. -++++|+.... ...+.+||+. ++.+.+
T Consensus 56 g~~l~~~d~~~-----~~i~~~~~-~g~~~~~~~-~~~-~~~gl~~d~dG~l~v~~~~-----~~~v~~~~~~-g~~~~~ 121 (305)
T 3dr2_A 56 QRTLVWSDLVG-----RRVLGWRE-DGTVDVLLD-ATA-FTNGNAVDAQQRLVHCEHG-----RRAITRSDAD-GQAHLL 121 (305)
T ss_dssp GTEEEEEETTT-----TEEEEEET-TSCEEEEEE-SCS-CEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEE
T ss_pred CCEEEEEECCC-----CEEEEEeC-CCCEEEEeC-CCC-ccceeeECCCCCEEEEECC-----CCEEEEECCC-CCEEEE
Confidence 34577765433 46888988 444443321 111 1122222 26788887421 2468889986 666655
Q ss_pred ccccC-cc---cceEEEEECCEEEEE----eccC---C-----CCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-C
Q 007704 436 RSMLQ-KR---FALAAAELNGVLYAT----GGYD---G-----NEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-N 498 (592)
Q Consensus 436 ~~~p~-~R---~~~~a~~~~g~IYV~----GG~~---~-----~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~ 498 (592)
..... .+ ....++.-+|.||+. |-.. + ......+++||+.++.++.+..+ . ....++.. +
T Consensus 122 ~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~--~-~p~gl~~spd 198 (305)
T 3dr2_A 122 VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADL--D-HPNGLAFSPD 198 (305)
T ss_dssp ECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEE--S-SEEEEEECTT
T ss_pred EeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEecC--C-CCcceEEcCC
Confidence 32211 11 111222237889985 3211 0 01135799999988887766411 1 11223333 4
Q ss_pred C-EEEEEecCCCCCCCCeEEEEeCCCCeEEE---cCCCCCCCcceEEEE-ECCEEEEEecccCCCccccEEEEEcCC
Q 007704 499 G-KLYALGGFDGSAMVPSIEVYDPRLGSWMS---GEPMKLSRGYLGAAV-VKEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 499 ~-~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~---v~~lp~~R~~~s~~v-~~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+ .||+............+++||...+.... ....+.. ....+++ -++.||+..+ +.|.+||++
T Consensus 199 g~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~-~pdgi~~d~~G~lwv~~~--------~gv~~~~~~ 266 (305)
T 3dr2_A 199 EQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDG-LPDGFCVDRGGWLWSSSG--------TGVCVFDSD 266 (305)
T ss_dssp SSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSS-CCCSEEECTTSCEEECCS--------SEEEEECTT
T ss_pred CCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCC-CCCeEEECCCCCEEEecC--------CcEEEECCC
Confidence 4 57777542211113579999987654321 1111111 1112332 2567777542 349999987
No 232
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=88.76 E-value=6.2 Score=38.25 Aligned_cols=149 Identities=14% Similarity=0.115 Sum_probs=77.1
Q ss_pred EEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCC--CcceEEEEECC-EEEEEecCCCCcccceEEEEeCCCCeEEEc
Q 007704 359 ELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGT--KGSLAGATIDN-KIFAIGGGNGLECFSDVEMLDLDIGKWIRT 435 (592)
Q Consensus 359 ~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~--r~~~~~~~~~~-~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i 435 (592)
.+++.++.+ +.+..+|+.+.+....-.++.. +.......-++ .+|+.++. ...++++|+.+++-...
T Consensus 2 ~~~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~-----~~~v~~~d~~~~~~~~~ 71 (337)
T 1pby_B 2 DYILAPARP-----DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK-----SESLVKIDLVTGETLGR 71 (337)
T ss_dssp EEEEEEETT-----TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT-----TTEEEEEETTTCCEEEE
T ss_pred cEEEEcCCC-----CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC-----CCeEEEEECCCCCeEee
Confidence 455666644 4789999988766433222221 11222223355 67777643 25799999988765432
Q ss_pred ccccCc----ccceEEEEE-C-CEEEEEeccC---CCC---CCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCE-E
Q 007704 436 RSMLQK----RFALAAAEL-N-GVLYATGGYD---GNE---YMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGK-L 501 (592)
Q Consensus 436 ~~~p~~----R~~~~a~~~-~-g~IYV~GG~~---~~~---~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~-L 501 (592)
-..+.+ ..-..++.. + +.+|+..... ... ....+.+||+.+......-... ...+.++.. +++ |
T Consensus 72 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l 149 (337)
T 1pby_B 72 IDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP--RQITMLAWARDGSKL 149 (337)
T ss_dssp EECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC--SSCCCEEECTTSSCE
T ss_pred EEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC--CCcceeEECCCCCEE
Confidence 111110 011222332 3 4677764210 011 1367999999987754432222 111223322 444 6
Q ss_pred EEEecCCCCCCCCeEEEEeCCCCeEE
Q 007704 502 YALGGFDGSAMVPSIEVYDPRLGSWM 527 (592)
Q Consensus 502 yv~GG~~~~~~~~~v~~yD~~t~~W~ 527 (592)
|+.+ ..+.+||+.+.+-.
T Consensus 150 ~~~~--------~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 150 YGLG--------RDLHVMDPEAGTLV 167 (337)
T ss_dssp EEES--------SSEEEEETTTTEEE
T ss_pred EEeC--------CeEEEEECCCCcEe
Confidence 6652 35889998887654
No 233
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=88.49 E-value=4 Score=44.09 Aligned_cols=187 Identities=12% Similarity=0.018 Sum_probs=97.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeEEEcc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTR 436 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~ 436 (592)
++.++++.+..+ .+..||..+++...+...+. .....+-+|+.+++++.+... ...++++|+.+++++.+.
T Consensus 121 g~~~~~~s~~~~-----~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~-~~~i~~~d~~~g~~~~l~ 191 (582)
T 3o4h_A 121 GEAVVFTGATED-----RVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGG-RVSLFTSNLSSGGLRVFD 191 (582)
T ss_dssp SSCEEEEEECSS-----CEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETT-EEEEEEEETTTCCCEEEC
T ss_pred CCeEEEEecCCC-----CceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCC-CeEEEEEcCCCCCceEee
Confidence 345555555432 23477888887766643332 223334577766665533211 246999999999888764
Q ss_pred cccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCc-----eeEE--EEECCEEEEEecCC
Q 007704 437 SMLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRG-----CHSL--AVLNGKLYALGGFD 508 (592)
Q Consensus 437 ~~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~-----~~s~--v~~~~~Lyv~GG~~ 508 (592)
...... ...+.. +|+.++.+..++ ...++++|+.++....+........ .... ..-++++|+.+..+
T Consensus 192 ~~~~~~--~~~~~SpDG~~l~~~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 266 (582)
T 3o4h_A 192 SGEGSF--SSASISPGMKVTAGLETAR---EARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARRE 266 (582)
T ss_dssp CSSCEE--EEEEECTTSCEEEEEECSS---CEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEET
T ss_pred cCCCcc--ccceECCCCCEEEEccCCC---eeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcC
Confidence 322111 112222 555444433322 2579999999988873322111100 0111 11266777776654
Q ss_pred CCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecccCCCccccEEEEEcCCC
Q 007704 509 GSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEGQ 571 (592)
Q Consensus 509 ~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~~ 571 (592)
+ .+.+|+. ++... .+. ....+++..++++++.++... .-..++.+|...
T Consensus 267 g-----~~~l~~~--g~~~~---~~~-~~v~~~~~sdg~~l~~~s~~~---~p~~l~~~d~~~ 315 (582)
T 3o4h_A 267 G-----RSAVFID--GERVE---APQ-GNHGRVVLWRGKLVTSHTSLS---TPPRIVSLPSGE 315 (582)
T ss_dssp T-----EEEEEET--TEEEC---CCS-SEEEEEEEETTEEEEEEEETT---EEEEEEEETTCC
T ss_pred C-----cEEEEEE--CCeec---cCC-CceEEEEecCCEEEEEEcCCC---CCCeEEEEcCCC
Confidence 3 4667776 44433 222 122233333788777666432 235677777643
No 234
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=88.38 E-value=22 Score=38.65 Aligned_cols=182 Identities=13% Similarity=0.130 Sum_probs=96.6
Q ss_pred EEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEEcc-
Q 007704 360 LYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTR- 436 (592)
Q Consensus 360 Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~- 436 (592)
.++.||.+ ..+..||..+.+... .+......-.++.+ ++++++.||.+ ..+.+||..+++....-
T Consensus 162 ~l~s~s~D-----~~v~lwd~~~~~~~~--~l~~H~~~V~~v~fspdg~~las~s~D-----~~i~lwd~~~g~~~~~~~ 229 (611)
T 1nr0_A 162 RIISGSDD-----NTVAIFEGPPFKFKS--TFGEHTKFVHSVRYNPDGSLFASTGGD-----GTIVLYNGVDGTKTGVFE 229 (611)
T ss_dssp EEEEEETT-----SCEEEEETTTBEEEE--EECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEECB
T ss_pred EEEEEeCC-----CeEEEEECCCCeEee--eeccccCceEEEEECCCCCEEEEEECC-----CcEEEEECCCCcEeeeec
Confidence 57777766 357778876654432 12222222223333 67888888865 46788998877654321
Q ss_pred c--c---cCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCC-CceeEEEEECCEEEEEecCCC
Q 007704 437 S--M---LQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRR-RGCHSLAVLNGKLYALGGFDG 509 (592)
Q Consensus 437 ~--~---p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~-R~~~s~v~~~~~Lyv~GG~~~ 509 (592)
. + .....-.+++.. +++.++.||.+ ..+.++|+.+......-..... ......+..++..++.++.++
T Consensus 230 ~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D-----~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~ 304 (611)
T 1nr0_A 230 DDSLKNVAHSGSVFGLTWSPDGTKIASASAD-----KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANG 304 (611)
T ss_dssp CTTSSSCSSSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTC
T ss_pred cccccccccCCCEEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCC
Confidence 1 0 011111122222 66777778765 4688999998876543222211 112223344666677776553
Q ss_pred CCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 510 SAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 510 ~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.+..+|+.+..-...-. .+...-.+++.. +++.++.|+.++ .|.+||..
T Consensus 305 -----~i~~~~~~~~~~~~~~~-gh~~~v~~l~~spdg~~l~s~s~D~------~v~~Wd~~ 354 (611)
T 1nr0_A 305 -----FINFVNPELGSIDQVRY-GHNKAITALSSSADGKTLFSADAEG------HINSWDIS 354 (611)
T ss_dssp -----CEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTS------CEEEEETT
T ss_pred -----cEEEEeCCCCCcceEEc-CCCCCEEEEEEeCCCCEEEEEeCCC------cEEEEECC
Confidence 46778887765332211 111111222222 566777777653 37777765
No 235
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=88.10 E-value=22 Score=35.34 Aligned_cols=195 Identities=15% Similarity=0.189 Sum_probs=103.3
Q ss_pred eEEEEECCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCC-CCCcceEEEE-ECCEEEEEecCCCCcccceEEEEeCC
Q 007704 351 ASAAMLNGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLN-GTKGSLAGAT-IDNKIFAIGGGNGLECFSDVEMLDLD 428 (592)
Q Consensus 351 ~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp-~~r~~~~~~~-~~~~Iyv~GG~~~~~~~~~v~~yD~~ 428 (592)
.++...++.+|+.|.. ..+++-.-.-.+|+.+.... .+-..+.++. -++.+|+.|.. ..+++-.-.
T Consensus 83 ~~i~~~~~~~~~~g~~------g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------g~v~~S~Dg 150 (327)
T 2xbg_A 83 NSVSFQGNEGWIVGEP------PIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNV------GAIYRTKDS 150 (327)
T ss_dssp EEEEEETTEEEEEEET------TEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETT------CCEEEESST
T ss_pred EEEEecCCeEEEEECC------CeEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCC------ccEEEEcCC
Confidence 3444457788887532 23555444457899986432 1222233333 46888888742 134443334
Q ss_pred CCeEEEcccccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEE-eCCCCeEEEeccCCCCCceeEEEEE-CCEEEEEe
Q 007704 429 IGKWIRTRSMLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERF-DPREHYWTKIANMNRRRGCHSLAVL-NGKLYALG 505 (592)
Q Consensus 429 t~~W~~i~~~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~y-D~~t~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~G 505 (592)
-.+|+.+..... ..-+.++.. ++.+|++|- . ..+++- |....+|+.+.. +.....+.++.. ++.+|+.+
T Consensus 151 G~tW~~~~~~~~-~~~~~~~~~~~~~~~~~g~-~-----G~~~~S~d~gG~tW~~~~~-~~~~~~~~~~~~~~g~~~~~~ 222 (327)
T 2xbg_A 151 GKNWQALVQEAI-GVMRNLNRSPSGEYVAVSS-R-----GSFYSTWEPGQTAWEPHNR-TTSRRLHNMGFTPDGRLWMIV 222 (327)
T ss_dssp TSSEEEEECSCC-CCEEEEEECTTSCEEEEET-T-----SSEEEEECTTCSSCEEEEC-CSSSCEEEEEECTTSCEEEEE
T ss_pred CCCCEEeecCCC-cceEEEEEcCCCcEEEEEC-C-----CcEEEEeCCCCCceeECCC-CCCCccceeEECCCCCEEEEe
Confidence 568998754222 223333333 556666652 2 123443 333578998853 333444455443 67888776
Q ss_pred cCCCCCCCCeEEEEeCC-CCeEEEcCC--CCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC-CcEEEccc
Q 007704 506 GFDGSAMVPSIEVYDPR-LGSWMSGEP--MKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG-QGWEEINS 578 (592)
Q Consensus 506 G~~~~~~~~~v~~yD~~-t~~W~~v~~--lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~W~~v~~ 578 (592)
.. ..++..+.. -.+|+.+.. ++.....++++.. ++.+|++|+. + .+++-.-. .+|+.+..
T Consensus 223 ~~------G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~-g------~i~~S~DgG~tW~~~~~ 287 (327)
T 2xbg_A 223 NG------GKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGA-G------ALLCSQDGGQTWQQDVD 287 (327)
T ss_dssp TT------TEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEEST-T------CEEEESSTTSSCEECGG
T ss_pred CC------ceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCC-C------eEEEeCCCCcccEEcCc
Confidence 42 134454333 468988753 2333233444333 5678888763 1 25443333 89998864
No 236
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=88.06 E-value=29 Score=37.65 Aligned_cols=151 Identities=17% Similarity=0.152 Sum_probs=85.1
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEE-CCC--CC--CCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCC
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTS-RPS--LN--GTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDI 429 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~-l~~--lp--~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t 429 (592)
++++++.||.++ .+..||..+++... +.. +. .....-..+.+ +++.++.||.+ ..+.++|..+
T Consensus 201 dg~~las~s~D~-----~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D-----~~v~lWd~~~ 270 (611)
T 1nr0_A 201 DGSLFASTGGDG-----TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD-----KTIKIWNVAT 270 (611)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTT
T ss_pred CCCEEEEEECCC-----cEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC-----CeEEEEeCCC
Confidence 677888888763 57888987776533 211 00 11111122233 67788888755 4788999998
Q ss_pred CeEEEcccccC-cccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCEEEEEec
Q 007704 430 GKWIRTRSMLQ-KRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGKLYALGG 506 (592)
Q Consensus 430 ~~W~~i~~~p~-~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~Lyv~GG 506 (592)
.+....-.... .......+..++..++.++.+ ..+..+|+.+..-...- ......-..+.+ +++.++.|+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d-----~~i~~~~~~~~~~~~~~--~gh~~~v~~l~~spdg~~l~s~s 343 (611)
T 1nr0_A 271 LKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN-----GFINFVNPELGSIDQVR--YGHNKAITALSSSADGKTLFSAD 343 (611)
T ss_dssp TEEEEEEECCSSGGGCEEEEEECSSCEEEEETT-----CCEEEEETTTTEEEEEE--CCCSSCEEEEEECTTSSEEEEEE
T ss_pred CceeeeecCCCCccceeEEEEEcCCEEEEEeCC-----CcEEEEeCCCCCcceEE--cCCCCCEEEEEEeCCCCEEEEEe
Confidence 87654322211 111223334466666666655 34677888776532221 111111222333 677788888
Q ss_pred CCCCCCCCeEEEEeCCCCeEEEc
Q 007704 507 FDGSAMVPSIEVYDPRLGSWMSG 529 (592)
Q Consensus 507 ~~~~~~~~~v~~yD~~t~~W~~v 529 (592)
.++ .+.++|..+......
T Consensus 344 ~D~-----~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 344 AEG-----HINSWDISTGISNRV 361 (611)
T ss_dssp TTS-----CEEEEETTTCCEEEC
T ss_pred CCC-----cEEEEECCCCceeee
Confidence 664 578899888766554
No 237
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=87.97 E-value=21 Score=35.29 Aligned_cols=141 Identities=13% Similarity=0.170 Sum_probs=69.8
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
++.+++.|+.+ ..+..||..+.+.... +......-..+.+ +++.++.||.+ ..+.+||.....-..
T Consensus 87 ~~~~l~s~s~D-----~~v~lwd~~~~~~~~~--~~~h~~~v~~v~~sp~~~~l~s~~~d-----~~i~~wd~~~~~~~~ 154 (343)
T 2xzm_R 87 ENCFAISSSWD-----KTLRLWDLRTGTTYKR--FVGHQSEVYSVAFSPDNRQILSAGAE-----REIKLWNILGECKFS 154 (343)
T ss_dssp STTEEEEEETT-----SEEEEEETTSSCEEEE--EECCCSCEEEEEECSSTTEEEEEETT-----SCEEEEESSSCEEEE
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCcEEEE--EcCCCCcEEEEEECCCCCEEEEEcCC-----CEEEEEeccCCceee
Confidence 56677777766 4688899888754321 1111111222223 56777777755 467788876443222
Q ss_pred cccccCcccceEEEEE--C----------CEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCE
Q 007704 435 TRSMLQKRFALAAAEL--N----------GVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGK 500 (592)
Q Consensus 435 i~~~p~~R~~~~a~~~--~----------g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~ 500 (592)
..........-..+.+ . +.+++.|+.+ ..+.+||.....-..+.. .. ..-..+.+ +++
T Consensus 155 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~--h~-~~v~~~~~s~~g~ 226 (343)
T 2xzm_R 155 SAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD-----GRLKVWNTNFQIRYTFKA--HE-SNVNHLSISPNGK 226 (343)
T ss_dssp CCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT-----SEEEEEETTTEEEEEEEC--CS-SCEEEEEECTTSS
T ss_pred eecccCCCceeeeeeeccccccccccCCCCCEEEEEcCC-----CEEEEEcCCCceeEEEcC--cc-ccceEEEECCCCC
Confidence 2211111111111112 1 1456666655 357778743322111111 11 11222333 677
Q ss_pred EEEEecCCCCCCCCeEEEEeCC
Q 007704 501 LYALGGFDGSAMVPSIEVYDPR 522 (592)
Q Consensus 501 Lyv~GG~~~~~~~~~v~~yD~~ 522 (592)
.++.|+.++ .+.+||..
T Consensus 227 ~l~sgs~dg-----~v~iwd~~ 243 (343)
T 2xzm_R 227 YIATGGKDK-----KLLIWDIL 243 (343)
T ss_dssp EEEEEETTC-----EEEEEESS
T ss_pred EEEEEcCCC-----eEEEEECC
Confidence 888888653 57788874
No 238
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=87.96 E-value=19 Score=34.35 Aligned_cols=135 Identities=16% Similarity=0.254 Sum_probs=70.0
Q ss_pred ceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEE
Q 007704 373 NTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAEL 450 (592)
Q Consensus 373 ~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~ 450 (592)
+.|..+|..+++...+-.+......-.++.+ +++.++.|+.+ ..+.++|..+++-...-.... ........
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D-----g~v~iw~~~~~~~~~~~~~h~--~~~~~~~~ 117 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQKRLRNMTSHS--ARVGSLSW 117 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECCS--SCEEEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC-----CcEEEeecCCceeEEEecCcc--ceEEEeec
Confidence 4689999999877654333322222223333 67888888865 368889998886543221111 12223334
Q ss_pred CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCC
Q 007704 451 NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGKLYALGGFDGSAMVPSIEVYDPRLG 524 (592)
Q Consensus 451 ~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~~~~~~~~v~~yD~~t~ 524 (592)
.+.+.+.|+.++ .+..++..+..................... ++..++.|+.++ .+.+||..+.
T Consensus 118 ~~~~l~s~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~ 182 (318)
T 4ggc_A 118 NSYILSSGSRSG-----HIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN-----LVNVWPSAPG 182 (318)
T ss_dssp ETTEEEEEETTS-----EEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEESSCB
T ss_pred CCCEEEEEecCC-----ceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCc-----ceeEEECCCC
Confidence 555666666442 344455444332211111111111222222 566777777654 4778887654
No 239
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=87.08 E-value=0.29 Score=50.58 Aligned_cols=140 Identities=15% Similarity=0.180 Sum_probs=56.2
Q ss_pred ECCEEEEEeeCCCCCCcceEEEEECCCC--eEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCC--e
Q 007704 356 LNGELYIFGGGDGNSWHNTVESYSPAND--EWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIG--K 431 (592)
Q Consensus 356 ~~~~Iyv~GG~~~~~~~~~v~~yd~~t~--~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~--~ 431 (592)
.++.||+ |+.+ ..++.+|..++ .|+.-. .+ ...+.+..++++|+.|+.+ ..++.+|..++ .
T Consensus 8 ~~~~v~~-gs~d-----g~v~a~d~~tG~~~W~~~~---~~-~~s~p~~~~g~~~v~~s~d-----g~l~a~d~~tG~~~ 72 (369)
T 2hz6_A 8 PETLLFV-STLD-----GSLHAVSKRTGSIKWTLKE---DP-VLQVPTHVEEPAFLPDPND-----GSLYTLGSKNNEGL 72 (369)
T ss_dssp CTTEEEE-EETT-----SEEEEEETTTCCEEEEEEC---CC-SCCCC-----CCEEECTTT-----CCEEEC-----CCS
T ss_pred eCCEEEE-EcCC-----CEEEEEECCCCCEEEEecC---CC-ceecceEcCCCEEEEeCCC-----CEEEEEECCCCcee
Confidence 3556665 4433 36899998876 476533 11 1112234567788886543 36888998665 4
Q ss_pred EEEcccccCcccceEEEE-ECCEEEEEeccCCCCCCCeeEEEeCCCCe--EEEeccCCCCCceeEEEEECCEEEEEecCC
Q 007704 432 WIRTRSMLQKRFALAAAE-LNGVLYATGGYDGNEYMNSAERFDPREHY--WTKIANMNRRRGCHSLAVLNGKLYALGGFD 508 (592)
Q Consensus 432 W~~i~~~p~~R~~~~a~~-~~g~IYV~GG~~~~~~~~~v~~yD~~t~~--W~~i~~~p~~R~~~s~v~~~~~Lyv~GG~~ 508 (592)
|+.-...+.... .+.+. .++.+|+ |+.+ ..++.+|+.+++ |+.-.... .+ .+..++.||+ |+.+
T Consensus 73 w~~~~~~~~~~~-~sp~~~~~~~v~~-g~~d-----g~v~a~D~~tG~~~w~~~~~~~-~~----~~p~~~~v~~-~~~d 139 (369)
T 2hz6_A 73 TKLPFTIPELVQ-ASPCRSSDGILYM-GKKQ-----DIWYVIDLLTGEKQQTLSSAFA-DS----LSPSTSLLYL-GRTE 139 (369)
T ss_dssp EECSCCHHHHHT-TCSCC-----CCC-CEEE-----EEEEEECCC---------------------------EEE-EEEE
T ss_pred eeeeccCccccc-cCceEecCCEEEE-EeCC-----CEEEEEECCCCcEEEEecCCCc-cc----ccccCCEEEE-EecC
Confidence 653222111111 11111 3555554 3322 358899988764 75432111 11 1113444554 4322
Q ss_pred CCCCCCeEEEEeCCCCe--EEE
Q 007704 509 GSAMVPSIEVYDPRLGS--WMS 528 (592)
Q Consensus 509 ~~~~~~~v~~yD~~t~~--W~~ 528 (592)
..+..+|+.+.+ |+.
T Consensus 140 -----g~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 140 -----YTITMYDTKTRELRWNA 156 (369)
T ss_dssp -----EEEECCCSSSSSCCCEE
T ss_pred -----CEEEEEECCCCCEEEeE
Confidence 357788887653 764
No 240
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=87.04 E-value=12 Score=40.35 Aligned_cols=199 Identities=11% Similarity=0.018 Sum_probs=97.7
Q ss_pred EEECCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeC--CCCe
Q 007704 354 AMLNGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDL--DIGK 431 (592)
Q Consensus 354 v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~--~t~~ 431 (592)
...+|+.+++++..+. .+..|+..++.-.++...+.. .....+...+++.+.+..++......+|..+. ....
T Consensus 29 ~~~DG~~la~~s~~~g----~~~lw~~~~g~~~~lt~~~~~-~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~~ 103 (582)
T 3o4h_A 29 GVVDGDKLLVVGFSEG----SVNAYLYDGGETVKLNREPIN-SVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEE 103 (582)
T ss_dssp EEETTTEEEEEEEETT----EEEEEEEETTEEEECCSSCCS-EECEECTTCSEEEEEEECSTTSCCEEEEEEETTSTTCC
T ss_pred cCCCCCeEEEEEccCC----ceeEEEEcCCCcEeeeccccc-ccccccCCCCeEEEEeccCCCCcceEEEEEeccCCCcc
Confidence 3457777777664221 234444456666555432211 11111111236555444322222346777877 4432
Q ss_pred EEEcccccCcccceEEEEEC-CEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEECCEEEEEecCCCC
Q 007704 432 WIRTRSMLQKRFALAAAELN-GVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVLNGKLYALGGFDGS 510 (592)
Q Consensus 432 W~~i~~~p~~R~~~~a~~~~-g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~~~~Lyv~GG~~~~ 510 (592)
- .+......+ ..+...+ +.++++.+.. ....+||+.++.-..+...+. ......-+|+.+++++.+..
T Consensus 104 ~-~l~~~~~~~--~~~~s~dg~~~~~~s~~~-----~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~ 172 (582)
T 3o4h_A 104 Q-RLEAVKPMR--ILSGVDTGEAVVFTGATE-----DRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGG 172 (582)
T ss_dssp E-ECTTSCSBE--EEEEEECSSCEEEEEECS-----SCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEET
T ss_pred c-cccCCCCce--eeeeCCCCCeEEEEecCC-----CCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCC
Confidence 2 333322222 2233334 3455554433 234478998888777654333 22223336666666554322
Q ss_pred CCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC-CcEEE
Q 007704 511 AMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG-QGWEE 575 (592)
Q Consensus 511 ~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~W~~ 575 (592)
....++++|+.+..++.+..-+ ......+.. +++.++.+..++ ...+++||.+ .....
T Consensus 173 -~~~~i~~~d~~~g~~~~l~~~~--~~~~~~~~SpDG~~l~~~~~~~----~~~i~~~d~~~~~~~~ 232 (582)
T 3o4h_A 173 -GRVSLFTSNLSSGGLRVFDSGE--GSFSSASISPGMKVTAGLETAR----EARLVTVDPRDGSVED 232 (582)
T ss_dssp -TEEEEEEEETTTCCCEEECCSS--CEEEEEEECTTSCEEEEEECSS----CEEEEEECTTTCCEEE
T ss_pred -CCeEEEEEcCCCCCceEeecCC--CccccceECCCCCEEEEccCCC----eeEEEEEcCCCCcEEE
Confidence 1245999999998888774322 111222222 555444333222 2579999987 66553
No 241
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=87.04 E-value=4.4 Score=41.96 Aligned_cols=141 Identities=12% Similarity=0.159 Sum_probs=70.0
Q ss_pred EEEEeeCCCCCCcceEEEEECCCC---eEE--ECCCCCCCCcceEEEEE---CCEEEEEecCCCCcccceEEEEeCCCCe
Q 007704 360 LYIFGGGDGNSWHNTVESYSPAND---EWT--SRPSLNGTKGSLAGATI---DNKIFAIGGGNGLECFSDVEMLDLDIGK 431 (592)
Q Consensus 360 Iyv~GG~~~~~~~~~v~~yd~~t~---~W~--~l~~lp~~r~~~~~~~~---~~~Iyv~GG~~~~~~~~~v~~yD~~t~~ 431 (592)
+++.|+.++ .+..||+.+. .+. ....+.........+.+ ++.+++.|+.+ ..+.+||+.+..
T Consensus 196 ~l~s~~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-----g~i~i~d~~~~~ 265 (430)
T 2xyi_A 196 YLLSASDDH-----TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-----QKLMIWDTRNNN 265 (430)
T ss_dssp EEEEECTTS-----CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCSC
T ss_pred eEEEEeCCC-----eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-----CeEEEEECCCCC
Confidence 777777653 5788888762 121 11111111112222333 56788887754 478899998652
Q ss_pred -EEEcccccCcccceEEEEE---CCEEEEEeccCCCCCCCeeEEEeCCCCe--EEEeccCCCCCceeEEEEE---CCEEE
Q 007704 432 -WIRTRSMLQKRFALAAAEL---NGVLYATGGYDGNEYMNSAERFDPREHY--WTKIANMNRRRGCHSLAVL---NGKLY 502 (592)
Q Consensus 432 -W~~i~~~p~~R~~~~a~~~---~g~IYV~GG~~~~~~~~~v~~yD~~t~~--W~~i~~~p~~R~~~s~v~~---~~~Ly 502 (592)
...+..+........+..+ +..+++.|+.+ ..+.+||+.+.. -..+. ........+.+ +..++
T Consensus 266 ~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d-----g~v~vwd~~~~~~~~~~~~---~h~~~v~~i~~sp~~~~~l 337 (430)
T 2xyi_A 266 TSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD-----KTVALWDLRNLKLKLHSFE---SHKDEIFQVQWSPHNETIL 337 (430)
T ss_dssp SSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCTTSCSEEEE---CCSSCEEEEEECSSCTTEE
T ss_pred CCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC-----CeEEEEeCCCCCCCeEEee---cCCCCEEEEEECCCCCCEE
Confidence 1111111111111222223 33488888865 468889987632 11111 11111222333 33578
Q ss_pred EEecCCCCCCCCeEEEEeCCC
Q 007704 503 ALGGFDGSAMVPSIEVYDPRL 523 (592)
Q Consensus 503 v~GG~~~~~~~~~v~~yD~~t 523 (592)
+.||.++ .+.+||...
T Consensus 338 ~s~~~d~-----~i~iwd~~~ 353 (430)
T 2xyi_A 338 ASSGTDR-----RLHVWDLSK 353 (430)
T ss_dssp EEEETTS-----CCEEEEGGG
T ss_pred EEEeCCC-----cEEEEeCCC
Confidence 8888654 466777765
No 242
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=86.43 E-value=22 Score=33.90 Aligned_cols=139 Identities=12% Similarity=0.049 Sum_probs=78.2
Q ss_pred ECCEEEEEecCCCCcccceEEEEeC------CCCeEE--Ec----ccccCc---ccceEEEE--ECCEEEEEeccCCCCC
Q 007704 403 IDNKIFAIGGGNGLECFSDVEMLDL------DIGKWI--RT----RSMLQK---RFALAAAE--LNGVLYATGGYDGNEY 465 (592)
Q Consensus 403 ~~~~Iyv~GG~~~~~~~~~v~~yD~------~t~~W~--~i----~~~p~~---R~~~~a~~--~~g~IYV~GG~~~~~~ 465 (592)
.+|.+|+|-| ..+|+++. ...... .+ +.+|.. ....-|+. .++++|+|=|
T Consensus 12 ~~ge~~fFk~-------~~~wr~~~~~~~~~~~~~~~p~~I~~~Wp~LP~~~f~~~~iDAa~~~~~g~~~fFkg------ 78 (225)
T 3oyo_A 12 SEYEVYFFAK-------NKYVRLHYTPGASSDTILTNLRLISSGFPSLAGTPFAEPGIDCSFHTEASEAYVFSG------ 78 (225)
T ss_dssp STTEEEEEET-------TEEEEEECCTTCSCCEEEEEEEEHHHHCGGGTTSTTTTTCCSEEEECSTTEEEEEET------
T ss_pred CCCEEEEEEC-------CEEEEEecccccccCcccCCceehhhhcccCCCccCCCCCEeEEEEcCCCeEEEEcC------
Confidence 3789999977 46778772 111121 11 234411 12222333 5899999988
Q ss_pred CCeeEEEeCCC----CeEEE----e----ccCCCC---CceeEEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCeEEE
Q 007704 466 MNSAERFDPRE----HYWTK----I----ANMNRR---RGCHSLAVL--NGKLYALGGFDGSAMVPSIEVYDPRLGSWMS 528 (592)
Q Consensus 466 ~~~v~~yD~~t----~~W~~----i----~~~p~~---R~~~s~v~~--~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~ 528 (592)
+.+|+||..+ ..... + +.+|.. ..--++... ++++|+|-| +..|+||...++...
T Consensus 79 -~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG-------~~yw~~d~~~~~~~~ 150 (225)
T 3oyo_A 79 -NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG-------NKYVRIAYDSKQLVG 150 (225)
T ss_dssp -TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred -CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC-------CeEEEEECCCCeecC
Confidence 5688897632 22221 1 233331 022233332 799999987 468999977766543
Q ss_pred ----cC-CCCC------CCcceEEEEE--CCEEEEEecccCCCccccEEEEEcCC
Q 007704 529 ----GE-PMKL------SRGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 529 ----v~-~lp~------~R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+. ..|. +...-++... ++++|+|-| +..|+||+.
T Consensus 151 gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG--------~~ywr~d~~ 197 (225)
T 3oyo_A 151 NIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG--------QNYVRIDFT 197 (225)
T ss_dssp EEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET--------TEEEEEECC
T ss_pred CCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC--------CEEEEEeCC
Confidence 21 1221 2222333342 689999988 458899975
No 243
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=86.43 E-value=22 Score=35.14 Aligned_cols=110 Identities=11% Similarity=-0.071 Sum_probs=62.6
Q ss_pred CCEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEec
Q 007704 404 DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIA 483 (592)
Q Consensus 404 ~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~ 483 (592)
++.+|+++.. ...+++||+.+++..... .+. .....+..-++++|+... ..+++||+.++.++.+.
T Consensus 60 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~-~~~-~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 60 SGTAWWFNIL-----ERELHELHLASGRKTVHA-LPF-MGSALAKISDSKQLIASD-------DGLFLRDTATGVLTLHA 125 (326)
T ss_dssp TTEEEEEEGG-----GTEEEEEETTTTEEEEEE-CSS-CEEEEEEEETTEEEEEET-------TEEEEEETTTCCEEEEE
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEE-CCC-cceEEEEeCCCeEEEEEC-------CCEEEEECCCCcEEEEe
Confidence 3678888642 247899999988765442 221 111122234788887642 35999999999988775
Q ss_pred cCCCC--CceeEEEEE--CCEEEEEec-CCCCCCCCeEEEEeCCCCeEEEc
Q 007704 484 NMNRR--RGCHSLAVL--NGKLYALGG-FDGSAMVPSIEVYDPRLGSWMSG 529 (592)
Q Consensus 484 ~~p~~--R~~~s~v~~--~~~Lyv~GG-~~~~~~~~~v~~yD~~t~~W~~v 529 (592)
..+.. ......+.+ ++++|+... .........+++|| +.+.+.+
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 43321 112222233 677876432 11112235789998 4666554
No 244
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=86.24 E-value=11 Score=41.71 Aligned_cols=120 Identities=15% Similarity=0.103 Sum_probs=68.9
Q ss_pred EEEEECCEEEEEecCCCCcccceEEEEeC-CCC--eEEEcccccCc-----c---cceEEEE--ECCE----EEEEeccC
Q 007704 399 AGATIDNKIFAIGGGNGLECFSDVEMLDL-DIG--KWIRTRSMLQK-----R---FALAAAE--LNGV----LYATGGYD 461 (592)
Q Consensus 399 ~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~-~t~--~W~~i~~~p~~-----R---~~~~a~~--~~g~----IYV~GG~~ 461 (592)
+-++.++.||+.+.. ...++.+|. .|+ .|+.-...... . .....++ .+++ ||+...
T Consensus 57 tP~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-- 129 (599)
T 1w6s_A 57 APLVVDGKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-- 129 (599)
T ss_dssp CCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT--
T ss_pred ccEEECCEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC--
Confidence 345669999998642 246889999 776 48764432211 1 1122344 5777 877532
Q ss_pred CCCCCCeeEEEeCCCCe--EEEeccCC-CC-CceeEEEEECCEEEEEecCCCCCCCCeEEEEeCCCC--eEEEc
Q 007704 462 GNEYMNSAERFDPREHY--WTKIANMN-RR-RGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDPRLG--SWMSG 529 (592)
Q Consensus 462 ~~~~~~~v~~yD~~t~~--W~~i~~~p-~~-R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~--~W~~v 529 (592)
-..++.+|.++++ |+.-..-. .. ....+-++.++.||+-.+.........+..||..+. .|+.-
T Consensus 130 ----dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 130 ----DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp ----TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred ----CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 1468999998875 87542111 01 112223456888876433111112357999999876 48764
No 245
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=85.89 E-value=30 Score=34.50 Aligned_cols=62 Identities=15% Similarity=0.037 Sum_probs=36.0
Q ss_pred CCEEEEEecCCCCCCCCe-EEEEeCCCCeEEE-cCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 498 NGKLYALGGFDGSAMVPS-IEVYDPRLGSWMS-GEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 498 ~~~Lyv~GG~~~~~~~~~-v~~yD~~t~~W~~-v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
++.+++.|+.++ . +.+||..+..-.. +..-.......+++.. ++..++.|+.+ ..|.+||..
T Consensus 206 ~g~~l~s~s~d~-----~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d------~~v~iw~~~ 270 (355)
T 3vu4_A 206 KSDMVATCSQDG-----TIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDK------WTLHVFEIF 270 (355)
T ss_dssp TSSEEEEEETTC-----SEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETT------CEEEEEESS
T ss_pred CCCEEEEEeCCC-----CEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECC------CEEEEEEcc
Confidence 778888888653 4 7889988764332 2100022222233332 56777777764 458888864
No 246
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=85.60 E-value=9.7 Score=36.38 Aligned_cols=135 Identities=19% Similarity=0.260 Sum_probs=75.1
Q ss_pred ECCEEEEEeeCCCCCCcceEEEEECCCCeE--EEC----CCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCC
Q 007704 356 LNGELYIFGGGDGNSWHNTVESYSPANDEW--TSR----PSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDI 429 (592)
Q Consensus 356 ~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W--~~l----~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t 429 (592)
.++++|+|=| +.+|+++.....+ ..+ +.+|. ... ++...++++|+|-| +.+|+|+..+
T Consensus 27 ~~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~wpgLP~-~ID-AA~~~~~~~yfFkG-------~~yw~~~~~~ 90 (219)
T 1hxn_A 27 NHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQWPQGPS-TVD-AAFSWEDKLYLIQD-------TKVYVFLTKG 90 (219)
T ss_dssp TTSCEEEEET-------TEEEESSSSSCTTCCEEGGGTCTTSCS-SCS-EEEEETTEEEEEET-------TEEEEEECSS
T ss_pred CCCcEEEEeC-------CEEEEEcCCCCCCCceEhhhhccCCCC-Ccc-EEEEECCcEEEecC-------CEEEEEeCCC
Confidence 4899999988 4577776543221 112 22332 222 33345899999977 6789998754
Q ss_pred C-eE-----EEccc-ccCccc----ceEEEE-E--CCEEEEEeccCCCCCCCeeEEEeCCC---CeEEEeccCCCCCcee
Q 007704 430 G-KW-----IRTRS-MLQKRF----ALAAAE-L--NGVLYATGGYDGNEYMNSAERFDPRE---HYWTKIANMNRRRGCH 492 (592)
Q Consensus 430 ~-~W-----~~i~~-~p~~R~----~~~a~~-~--~g~IYV~GG~~~~~~~~~v~~yD~~t---~~W~~i~~~p~~R~~~ 492 (592)
+ +- +.+.. +..+.. .--++. . ++++|+|-| +..|+||..+ ..|...+.+|.. ..
T Consensus 91 ~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~P~~i~~~~~g~p~~-vd- 161 (219)
T 1hxn_A 91 GYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG-------RRLWWLDLKSGAQATWTELPWPHEK-VD- 161 (219)
T ss_dssp SCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET-------TEEEEEEGGGGGGCCCEEECCSCSC-CS-
T ss_pred CceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC-------CEEEEEeCCCCceEhhhcCCCCCCC-cC-
Confidence 2 11 11211 112222 123333 2 689999988 5678998654 234443333222 22
Q ss_pred EEEE------------ECCEEEEEecCCCCCCCCeEEEEeCC
Q 007704 493 SLAV------------LNGKLYALGGFDGSAMVPSIEVYDPR 522 (592)
Q Consensus 493 s~v~------------~~~~Lyv~GG~~~~~~~~~v~~yD~~ 522 (592)
++.. .++.+|.|-| +..++||..
T Consensus 162 Aa~~~~~~~~~~~~~~~~~~~YFFkg-------~~y~r~~~~ 196 (219)
T 1hxn_A 162 GALCMEKPLGPNSCSTSGPNLYLIHG-------PNLYCYRHV 196 (219)
T ss_dssp EEEEESSCSSSCCSCSSSCEEEEEET-------TEEEEESSH
T ss_pred EEEEccccccccceeccCCeEEEEEC-------CEEEEEeCC
Confidence 3333 3467999977 357777764
No 247
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=85.53 E-value=36 Score=35.12 Aligned_cols=192 Identities=14% Similarity=0.050 Sum_probs=102.7
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE-CCEEEEEecCCCCcccceEEEEeCCCCe-EEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI-DNKIFAIGGGNGLECFSDVEMLDLDIGK-WIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~v~~yD~~t~~-W~~ 434 (592)
+++||+....+ +.+.++|+.++....+.... .. .+.+... ++.||+...... ..++++|+.+.. ...
T Consensus 141 ~g~lyv~d~~~-----~~I~~id~~~g~~~~~~~~~-~~-~~ia~~~~g~~l~~~d~~~~----~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 141 NNTVLAYQRDD-----PRVRLISVDDNKVTTVHPGF-KG-GKPAVTKDKQRVYSIGWEGT----HTVYVYMKASGWAPTR 209 (409)
T ss_dssp TTEEEEEETTT-----TEEEEEETTTTEEEEEEETC-CB-CBCEECTTSSEEEEEBSSTT----CEEEEEEGGGTTCEEE
T ss_pred CCCEEEEecCC-----CcEEEEECCCCEEEEeeccC-CC-CceeEecCCCcEEEEecCCC----ceEEEEEcCCCceeEE
Confidence 78899986532 57999999988766553221 11 1212222 345666643211 278999987543 223
Q ss_pred ccccc--CcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEecc---CCCCCce-e-EEEEE--CCEEEE
Q 007704 435 TRSML--QKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIAN---MNRRRGC-H-SLAVL--NGKLYA 503 (592)
Q Consensus 435 i~~~p--~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~---~p~~R~~-~-s~v~~--~~~Lyv 503 (592)
+.... ....-+.+++. ++.||+..+ ...+++||+.+.....+.. ....... . .++.. ++.||+
T Consensus 210 ~g~~~~~~~~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv 283 (409)
T 3hrp_A 210 IGQLGSTFSGKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYM 283 (409)
T ss_dssp EEECCTTSCSCCCBCEECTTSSEEEEECT------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEE
T ss_pred eeeccchhcCCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEE
Confidence 31111 11122233333 688999432 2479999999887655521 1111222 1 45544 589999
Q ss_pred EecCCCCCCCCeEEEEeCCCCeEEEcCCCCC----------C--CcceEEEEE-CCEEEEEec-ccCCCccccEEEEEcC
Q 007704 504 LGGFDGSAMVPSIEVYDPRLGSWMSGEPMKL----------S--RGYLGAAVV-KEAIYVIGG-VKNGSEIVDTVERFKE 569 (592)
Q Consensus 504 ~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~----------~--R~~~s~~v~-~~~Iyv~GG-~~~~~~~~~~v~~Yd~ 569 (592)
.... .+.|++||+....-...+.... . .....+++- ++.||+.-. .+ +.|.+||+
T Consensus 284 ~d~~-----~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~------~~I~~~~~ 352 (409)
T 3hrp_A 284 SDQN-----LSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKG------YCLRKLDI 352 (409)
T ss_dssp EETT-----TTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTT------CEEEEEET
T ss_pred EeCC-----CCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCC------CEEEEEEC
Confidence 8542 3579999987653222222100 0 112233333 467888754 32 56899994
Q ss_pred C-CcEEEc
Q 007704 570 G-QGWEEI 576 (592)
Q Consensus 570 ~-~~W~~v 576 (592)
. ..-..+
T Consensus 353 ~~G~v~~~ 360 (409)
T 3hrp_A 353 LDGYVSTV 360 (409)
T ss_dssp TTTEEEEE
T ss_pred CCCEEEEE
Confidence 4 544443
No 248
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=84.99 E-value=1.8 Score=41.69 Aligned_cols=140 Identities=16% Similarity=0.075 Sum_probs=77.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCC----C-----------eEEECCCCC--CCCcceEEEEECCEEEEEecCCCCccc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPAN----D-----------EWTSRPSLN--GTKGSLAGATIDNKIFAIGGGNGLECF 419 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t----~-----------~W~~l~~lp--~~r~~~~~~~~~~~Iyv~GG~~~~~~~ 419 (592)
++++|+|-| +.+|+++... + .|..++... ......+.-..++++|+|-|
T Consensus 15 ~ge~yfFkg-------~~~wr~~~~~~~~~~~~~~~P~~I~~~W~~Lp~~~f~p~~iDaaf~~~~g~~~fFKg------- 80 (227)
T 3lp9_A 15 NNEAYFFIN-------DKYVLLDYAPGSSRDKVLYGPTPVRDGFKSLNQTIFGSYGIDCSFDTENNEAFIFYE------- 80 (227)
T ss_dssp TTEEEEEET-------TEEEEEECCTTSSCCEEEEEEEEHHHHSGGGTTSHHHHHCCSEEEECSTTEEEEEET-------
T ss_pred CCeEEEEEC-------CEEEEEeCCCCCccccccCCceEHhhcCCcCCcccCCCCCceEEEECCCCEEEEEeC-------
Confidence 799999988 4577776621 1 233332111 11222222246899999987
Q ss_pred ceEEEEe--CCC--CeEE----Ec----ccccC---cccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEE--
Q 007704 420 SDVEMLD--LDI--GKWI----RT----RSMLQ---KRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWT-- 480 (592)
Q Consensus 420 ~~v~~yD--~~t--~~W~----~i----~~~p~---~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~-- 480 (592)
+.+|+|+ +.+ ..-. .+ +.+|. +..--++... ++++|+|-| +..|+||..+++-.
T Consensus 81 ~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~IDAA~~~~~~~k~yfFkG-------~~yw~~d~~~~~~~~g 153 (227)
T 3lp9_A 81 NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGIDAAYRSTRGKEVYLFKG-------DQYARIDYGSNSMVNK 153 (227)
T ss_dssp TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCSEEEECSSTTEEEEEET-------TEEEEEETTTTEESSS
T ss_pred CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCcccEEEEECCCCEEEEEEC-------CEEEEEeCCCccccCC
Confidence 5789998 322 1111 12 12331 2222233333 689999988 57899998755321
Q ss_pred ---Eec-cCCC------CCceeEEEE--ECCEEEEEecCCCCCCCCeEEEEeCCCC
Q 007704 481 ---KIA-NMNR------RRGCHSLAV--LNGKLYALGGFDGSAMVPSIEVYDPRLG 524 (592)
Q Consensus 481 ---~i~-~~p~------~R~~~s~v~--~~~~Lyv~GG~~~~~~~~~v~~yD~~t~ 524 (592)
.+. ..|. +..-.+++. .++++|+|-| +..|+||..+.
T Consensus 154 yPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg-------~~Ywr~d~~~~ 202 (227)
T 3lp9_A 154 EIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD-------DHYARVKVTPX 202 (227)
T ss_dssp SCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET-------TEEEEEECCSS
T ss_pred CCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC-------CEEEEEECCcc
Confidence 111 1121 122334444 2689999977 46899998765
No 249
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=84.49 E-value=19 Score=34.94 Aligned_cols=176 Identities=14% Similarity=0.191 Sum_probs=88.9
Q ss_pred EECCEEEEEeeCCCCCCcceEEEEECC-CCeEEECCCCCCCCcceEEEEE-CCEEEEEecCCCCcccceEEEEeCCCC-e
Q 007704 355 MLNGELYIFGGGDGNSWHNTVESYSPA-NDEWTSRPSLNGTKGSLAGATI-DNKIFAIGGGNGLECFSDVEMLDLDIG-K 431 (592)
Q Consensus 355 ~~~~~Iyv~GG~~~~~~~~~v~~yd~~-t~~W~~l~~lp~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~v~~yD~~t~-~ 431 (592)
..++.||+... + ..+++||+. ...|......+ . ..+.+.. ++.||+.. . ...++.||+... .
T Consensus 105 ~~~~~l~v~t~-~-----~~l~~~d~~g~~~~~~~~~~~--~-~~~~~~~~~g~l~vgt-~-----~~~l~~~d~~g~~~ 169 (330)
T 3hxj_A 105 IFEDILYVTSM-D-----GHLYAINTDGTEKWRFKTKKA--I-YATPIVSEDGTIYVGS-N-----DNYLYAINPDGTEK 169 (330)
T ss_dssp EETTEEEEECT-T-----SEEEEECTTSCEEEEEECSSC--C-CSCCEECTTSCEEEEC-T-----TSEEEEECTTSCEE
T ss_pred EECCEEEEEec-C-----CEEEEEcCCCCEEEEEcCCCc--e-eeeeEEcCCCEEEEEc-C-----CCEEEEECCCCCEe
Confidence 34888887432 2 358899987 34575542211 1 1222333 67777743 1 247889998722 3
Q ss_pred EEEcccccCcccceEEEE-ECCEEEEEeccCCCCCCCeeEEEeCCC-CeEEEeccCCCCCceeEEEEE-CCEEEEEecCC
Q 007704 432 WIRTRSMLQKRFALAAAE-LNGVLYATGGYDGNEYMNSAERFDPRE-HYWTKIANMNRRRGCHSLAVL-NGKLYALGGFD 508 (592)
Q Consensus 432 W~~i~~~p~~R~~~~a~~-~~g~IYV~GG~~~~~~~~~v~~yD~~t-~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~ 508 (592)
|.... +.... .+.+. .++.||+.. ..+++||... ..|+....... ..+++.. ++.||+...
T Consensus 170 ~~~~~--~~~~~-~~~~~d~~g~l~v~t--------~~l~~~d~~g~~~~~~~~~~~~---~~~~~~~~~g~l~v~t~-- 233 (330)
T 3hxj_A 170 WRFKT--NDAIT-SAASIGKDGTIYFGS--------DKVYAINPDGTEKWNFYAGYWT---VTRPAISEDGTIYVTSL-- 233 (330)
T ss_dssp EEEEC--SSCCC-SCCEECTTCCEEEES--------SSEEEECTTSCEEEEECCSSCC---CSCCEECTTSCEEEEET--
T ss_pred EEEec--CCCce-eeeEEcCCCEEEEEe--------CEEEEECCCCcEEEEEccCCcc---eeceEECCCCeEEEEcC--
Confidence 55432 12211 22233 367777754 4688999442 34765432211 1223333 457777432
Q ss_pred CCCCCCeEEEEeCCCCe-EEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC--CcEEE
Q 007704 509 GSAMVPSIEVYDPRLGS-WMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG--QGWEE 575 (592)
Q Consensus 509 ~~~~~~~v~~yD~~t~~-W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~--~~W~~ 575 (592)
-..+++||+.... |..-.. ... ..+.+.. ++.||+. ..+ ..+++||++ ..|..
T Consensus 234 ----~~gl~~~~~~g~~~~~~~~~--~~~-~~~~~~~~~g~l~v~-t~~------ggl~~~d~~g~~~~~~ 290 (330)
T 3hxj_A 234 ----DGHLYAINPDGTEKWRFKTG--KRI-ESSPVIGNTDTIYFG-SYD------GHLYAINPDGTEKWNF 290 (330)
T ss_dssp ----TTEEEEECTTSCEEEEEECS--SCC-CSCCEECTTSCEEEE-CTT------CEEEEECTTSCEEEEE
T ss_pred ----CCeEEEECCCCCEeEEeeCC--CCc-cccceEcCCCeEEEe-cCC------CCEEEECCCCcEEEEE
Confidence 1357888875443 544221 111 1122333 5677763 322 248888876 35754
No 250
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=84.44 E-value=29 Score=33.08 Aligned_cols=64 Identities=14% Similarity=0.269 Sum_probs=35.4
Q ss_pred CCEEEEEecCCCCcccceEEEEeCCC--CeEEEcccccCcccceE-EEEE---CCEEEEEeccCCCCCCCeeEEEeCCCC
Q 007704 404 DNKIFAIGGGNGLECFSDVEMLDLDI--GKWIRTRSMLQKRFALA-AAEL---NGVLYATGGYDGNEYMNSAERFDPREH 477 (592)
Q Consensus 404 ~~~Iyv~GG~~~~~~~~~v~~yD~~t--~~W~~i~~~p~~R~~~~-a~~~---~g~IYV~GG~~~~~~~~~v~~yD~~t~ 477 (592)
++++++.|+.+ ..+.+||..+ ..++....+......-. ++.. ++.+++.|+.+ ..+.+||+.+.
T Consensus 22 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d-----g~v~vwd~~~~ 91 (351)
T 3f3f_A 22 YGRHVATCSSD-----QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD-----KTVKLWEEDPD 91 (351)
T ss_dssp SSSEEEEEETT-----SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT-----SCEEEEEECTT
T ss_pred CCCEEEEeeCC-----CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC-----CeEEEEecCCC
Confidence 56777777754 3677777764 34444433322222222 2222 36777888765 34677777654
No 251
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=84.31 E-value=29 Score=33.01 Aligned_cols=186 Identities=11% Similarity=0.126 Sum_probs=86.7
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeEEEcc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTR 436 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~ 436 (592)
+++.++.|+.++ .+..||..+++-...- ............++.+.+.|+.+ ..+..++..+.......
T Consensus 78 ~~~~l~sgs~Dg-----~v~iw~~~~~~~~~~~--~~h~~~~~~~~~~~~~l~s~~~~-----~~~~~~~~~~~~~~~~~ 145 (318)
T 4ggc_A 78 EGNYLAVGTSSA-----EVQLWDVQQQKRLRNM--TSHSARVGSLSWNSYILSSGSRS-----GHIHHHDVRVAEHHVAT 145 (318)
T ss_dssp TSSEEEEEETTS-----EEEEEETTTTEEEEEE--ECCSSCEEEEEEETTEEEEEETT-----SEEEEEETTSSSCEEEE
T ss_pred CCCEEEEEECCC-----cEEEeecCCceeEEEe--cCccceEEEeecCCCEEEEEecC-----CceEeeecCCCceeEEE
Confidence 677888888663 6788898887653321 11222233444566677777643 23445555444322111
Q ss_pred cccCcc-cceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeE--EEeccCCC-CCceeEEEEE--CCEE-EEEecCCC
Q 007704 437 SMLQKR-FALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYW--TKIANMNR-RRGCHSLAVL--NGKL-YALGGFDG 509 (592)
Q Consensus 437 ~~p~~R-~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W--~~i~~~p~-~R~~~s~v~~--~~~L-yv~GG~~~ 509 (592)
...... ........++..++.|+.+ ..+.+||..++.- ........ ...-.+++.. ++.+ ++.+|..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~- 219 (318)
T 4ggc_A 146 LSGHSQEVCGLRWAPDGRHLASGGND-----NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS- 219 (318)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTT-
T ss_pred EcCccCceEEEEEcCCCCEEEEEecC-----cceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCC-
Confidence 111111 1111122255666666655 3567888775431 11111111 1111122222 3333 3444422
Q ss_pred CCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecccCCCccccEEEEEcCC
Q 007704 510 SAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 510 ~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
...+.++|.....-......... ...++.. ++.+++.+|..+ ..|.+||..
T Consensus 220 ---~~~i~lwd~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~~~sg~~d-----~~i~iwd~~ 272 (318)
T 4ggc_A 220 ---DRHIRIWNVCSGACLSAVDAHSQ--VCSILWSPHYKELISGHGFAQ-----NQLVIWKYP 272 (318)
T ss_dssp ---TCEEEEEETTTCCEEEEEECSSC--EEEEEEETTTTEEEEEECTTT-----CCEEEEETT
T ss_pred ---CCEEEEEecccccccccccceee--eeeeeecccccceEEEEEcCC-----CEEEEEECC
Confidence 24577888877655443222211 1222222 455665555433 347888864
No 252
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=83.82 E-value=12 Score=39.93 Aligned_cols=141 Identities=13% Similarity=0.019 Sum_probs=77.4
Q ss_pred EEEEECCEEEEEecCCCCcccceEEEEeCCCCeEEE--c----ccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeE
Q 007704 399 AGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIR--T----RSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAE 470 (592)
Q Consensus 399 ~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~--i----~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~ 470 (592)
+++..++++|+|-| ..+|+++.....+.. + +.+|.. . -++... ++++|+|=| +.+|
T Consensus 267 Ai~~~~ge~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~Wp~LP~~-i-DAa~~~~~~g~~~fFKg-------~~~W 330 (450)
T 1su3_A 267 AITTIRGEVMFFKD-------RFYMRTNPFYPEVELNFISVFWPQLPNG-L-EAAYEFADRDEVRFFKG-------NKYW 330 (450)
T ss_dssp EEEEETTEEEEEET-------TEEEECCTTSSSCEEEEGGGTCTTSCSS-C-CEEEEEGGGTEEEEEET-------TEEE
T ss_pred eEEecCCeEEEEeC-------CEEEEEcCCCCcccceehhHhccCCCCC-e-eEEEEEcCCCeEEEEeC-------CEEE
Confidence 45568999999987 456666654433321 2 123321 1 223333 689999987 4567
Q ss_pred EEeCCCC--eE-EEec---cCCC-CCceeEEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCeEE-----EcC-CCC-C
Q 007704 471 RFDPREH--YW-TKIA---NMNR-RRGCHSLAVL--NGKLYALGGFDGSAMVPSIEVYDPRLGSWM-----SGE-PMK-L 534 (592)
Q Consensus 471 ~yD~~t~--~W-~~i~---~~p~-~R~~~s~v~~--~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~-----~v~-~lp-~ 534 (592)
+|+..+. .+ ..+. .+|. +..--+++.. ++++|+|-| +..|+||..+.+-. .+. ..| .
T Consensus 331 ~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG-------~~yw~yd~~~~~~~~gYPk~I~~~fpgi 403 (450)
T 1su3_A 331 AVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAHDFPGI 403 (450)
T ss_dssp EEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCSEEHHHHSTTS
T ss_pred EecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC-------CEEEEEeCCCccccCCCCcchhhcCCCC
Confidence 7764320 00 1111 1221 1112233333 689999977 46999998754322 121 011 1
Q ss_pred CCcceEEEEECCEEEEEecccCCCccccEEEEEcCC
Q 007704 535 SRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 535 ~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+..--++...++++|.|-| +..|+||..
T Consensus 404 p~~iDAA~~~~g~~YFFkg--------~~ywr~d~~ 431 (450)
T 1su3_A 404 GHKVDAVFMKDGFFYFFHG--------TRQYKFDPK 431 (450)
T ss_dssp CSCCSEEEEETTEEEEEET--------TEEEEEETT
T ss_pred CCCccEEEEcCCeEEEEeC--------CEEEEEECC
Confidence 2222234446899999988 558999975
No 253
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=82.96 E-value=31 Score=40.32 Aligned_cols=195 Identities=11% Similarity=0.085 Sum_probs=103.4
Q ss_pred ECCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCC----------CCcceEEEE-ECCEEEEEecCCCCcccceEEE
Q 007704 356 LNGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNG----------TKGSLAGAT-IDNKIFAIGGGNGLECFSDVEM 424 (592)
Q Consensus 356 ~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~----------~r~~~~~~~-~~~~Iyv~GG~~~~~~~~~v~~ 424 (592)
-+++.++++. -..++.+|........+..-.. ........+ -+++.++++. ...+++
T Consensus 254 pDG~~la~~~------~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~------~~~i~~ 321 (1045)
T 1k32_A 254 TDGRRILFSK------GGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS------RGQAFI 321 (1045)
T ss_dssp ESSSCEEEEE------TTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE------TTEEEE
T ss_pred CCCCEEEEEe------CCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE------cCEEEE
Confidence 4666555553 2468888886665554432110 011222333 4666555554 247888
Q ss_pred EeCCCCeEEEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeE-EEeCCCCeEEEeccCCCCCceeEEEEE-CCEEE
Q 007704 425 LDLDIGKWIRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAE-RFDPREHYWTKIANMNRRRGCHSLAVL-NGKLY 502 (592)
Q Consensus 425 yD~~t~~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~-~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~Ly 502 (592)
++..++....+...+..+....+.. +++.+++++. ...++ +||+.+.....+. ........++.- +++.+
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~-----~~~l~~~~d~~~~~~~~l~--~~~~~~~~~~~SpDG~~l 393 (1045)
T 1k32_A 322 QDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR-----EGDFLGIYDYRTGKAEKFE--ENLGNVFAMGVDRNGKFA 393 (1045)
T ss_dssp ECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET-----TEEEEEEEETTTCCEEECC--CCCCSEEEEEECTTSSEE
T ss_pred EcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC-----CCceEEEEECCCCCceEec--CCccceeeeEECCCCCEE
Confidence 8888877665533222122222223 5555555443 24788 8999888776665 222222222222 67766
Q ss_pred EEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccC----CCccccEEEEEcCC-CcEEEc
Q 007704 503 ALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKN----GSEIVDTVERFKEG-QGWEEI 576 (592)
Q Consensus 503 v~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~----~~~~~~~v~~Yd~~-~~W~~v 576 (592)
++++.+ .+++++|+.+..-+.+..-... ...+++.. +++.+++++... .......+++||.. .....+
T Consensus 394 a~~~~~-----~~v~~~d~~tg~~~~~~~~~~~-~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l 467 (1045)
T 1k32_A 394 VVANDR-----FEIMTVDLETGKPTVIERSREA-MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAA 467 (1045)
T ss_dssp EEEETT-----SEEEEEETTTCCEEEEEECSSS-CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEEC
T ss_pred EEECCC-----CeEEEEECCCCceEEeccCCCC-CccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEe
Confidence 676643 3799999998877665321111 11222222 566666665432 01223578889876 554444
No 254
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=82.73 E-value=17 Score=39.97 Aligned_cols=166 Identities=10% Similarity=-0.057 Sum_probs=88.7
Q ss_pred CCEEEEEeeCCCCC----CcceEEEEECCCCeEEECCCCCCCC--cceEEEEECCEEEEEecCCCCcccceEEEEeCCCC
Q 007704 357 NGELYIFGGGDGNS----WHNTVESYSPANDEWTSRPSLNGTK--GSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIG 430 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~----~~~~v~~yd~~t~~W~~l~~lp~~r--~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~ 430 (592)
+++.++++..+... ....++.+|..+.+...+....... ......+-+|+.++++.. .+++++|..++
T Consensus 71 Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~------~~i~~~~~~~g 144 (723)
T 1xfd_A 71 DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE------NNIYYCAHVGK 144 (723)
T ss_dssp TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET------TEEEEESSSSS
T ss_pred CCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC------CeEEEEECCCC
Confidence 77777777654322 2478999999998776665433221 122223336665566542 47899999887
Q ss_pred eEEEcccccCccc----------------ceEEEEE--CCEEEEEeccCCC-----------------------------
Q 007704 431 KWIRTRSMLQKRF----------------ALAAAEL--NGVLYATGGYDGN----------------------------- 463 (592)
Q Consensus 431 ~W~~i~~~p~~R~----------------~~~a~~~--~g~IYV~GG~~~~----------------------------- 463 (592)
+...+........ ......+ +++.++++..+..
T Consensus 145 ~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 224 (723)
T 1xfd_A 145 QAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSE 224 (723)
T ss_dssp CCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSC
T ss_pred ceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCC
Confidence 7665533211100 0122223 5555555443321
Q ss_pred CCCCeeEEEeCCCCeE-EEeccCCC---CCceeEEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCeEEEc
Q 007704 464 EYMNSAERFDPREHYW-TKIANMNR---RRGCHSLAVL--NGKLYALGGFDGSAMVPSIEVYDPRLGSWMSG 529 (592)
Q Consensus 464 ~~~~~v~~yD~~t~~W-~~i~~~p~---~R~~~s~v~~--~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v 529 (592)
....+++++|+.++.- ..+..... .......+.+ +++++++....+ .....++++|+.+.....+
T Consensus 225 ~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 225 NPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRA-QNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp CCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETT-SCEEEEEEEETTTCCEEEE
T ss_pred CCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCC-CCeEEEEEEeCCCCcceEE
Confidence 0123788899887762 44432111 1122223334 787665554322 2235789999988876554
No 255
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=82.27 E-value=28 Score=36.73 Aligned_cols=176 Identities=12% Similarity=0.122 Sum_probs=87.9
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
+++.++.|+.+ ..+..||........+... ...-..+.+ +++.++.|+.+ ..+.+||.....-..
T Consensus 396 dg~~l~~~~~d-----~~v~~~~~~~~~~~~~~~~---~~~v~~~~~s~d~~~l~~~~~d-----~~v~~w~~~~~~~~~ 462 (577)
T 2ymu_A 396 DGQTIASASDD-----KTVKLWNRNGQLLQTLTGH---SSSVWGVAFSPDDQTIASASDD-----KTVKLWNRNGQLLQT 462 (577)
T ss_dssp TSSCEEEEETT-----SEEEEECTTCCEEEEEECC---SSCEEEEEECTTSSEEEEEETT-----SEEEEEETTSCEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCCEEEEecCC---CCCeEEEEECCCCCEEEEEcCC-----CEEEEEECCCCEEEE
Confidence 56667777755 3577777554433333211 111122222 67777777754 357788875543333
Q ss_pred cccccCcccceEEEE-ECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCEEEEEecCCCCC
Q 007704 435 TRSMLQKRFALAAAE-LNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGKLYALGGFDGSA 511 (592)
Q Consensus 435 i~~~p~~R~~~~a~~-~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~Lyv~GG~~~~~ 511 (592)
+..... .-.+++. -++++++.|+.+ ..+.+||.....-..+..-.. .-..+.+ ++++++.|+.++
T Consensus 463 ~~~~~~--~v~~~~~spd~~~las~~~d-----~~i~iw~~~~~~~~~~~~h~~---~v~~l~~s~dg~~l~s~~~dg-- 530 (577)
T 2ymu_A 463 LTGHSS--SVRGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQTLTGHSS---SVRGVAFSPDGQTIASASDDK-- 530 (577)
T ss_dssp EECCSS--CEEEEEECTTSCEEEEEETT-----SEEEEEETTSCEEEEEECCSS---CEEEEEECTTSSCEEEEETTS--
T ss_pred EcCCCC--CEEEEEEcCCCCEEEEEeCC-----CEEEEEcCCCCEEEEEeCCCC---CEEEEEEcCCCCEEEEEECcC--
Confidence 221111 1112222 267777777754 357788865443333321111 1122233 677777887653
Q ss_pred CCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEc
Q 007704 512 MVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFK 568 (592)
Q Consensus 512 ~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd 568 (592)
.+.+||........+.. +...-.+++.. +++.++.||.++ .|.+||
T Consensus 531 ---~v~lwd~~~~~~~~~~~--h~~~v~~~~fs~dg~~l~s~~~D~------~i~~Wd 577 (577)
T 2ymu_A 531 ---TVKLWNRNGQLLQTLTG--HSSSVWGVAFSPDGQTIASASSDK------TVKLWN 577 (577)
T ss_dssp ---EEEEECTTSCEEEEEEC--CSSCEEEEEECTTSSCEEEEETTS------CEEEEC
T ss_pred ---EEEEEeCCCCEEEEEcC--CCCCEEEEEEcCCCCEEEEEeCCC------EEEEeC
Confidence 57888865544443321 11111223322 567777777643 266654
No 256
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=81.99 E-value=16 Score=40.13 Aligned_cols=104 Identities=8% Similarity=-0.151 Sum_probs=54.5
Q ss_pred eEEEEECCCCeEEECCCCCCC---CcceEEEEECCEEEEEecCCCCc----ccceEEEEeCCCCeEEEcccccCcc--cc
Q 007704 374 TVESYSPANDEWTSRPSLNGT---KGSLAGATIDNKIFAIGGGNGLE----CFSDVEMLDLDIGKWIRTRSMLQKR--FA 444 (592)
Q Consensus 374 ~v~~yd~~t~~W~~l~~lp~~---r~~~~~~~~~~~Iyv~GG~~~~~----~~~~v~~yD~~t~~W~~i~~~p~~R--~~ 444 (592)
.++.+|..+++-..+-..... .......+-+++.++++..+... ....++++|..+++-+.+....... ..
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~ 117 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQ 117 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCS
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccccccc
Confidence 678888887765443221111 11122223377766776543221 2468999999988766554332111 11
Q ss_pred eEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEec
Q 007704 445 LAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIA 483 (592)
Q Consensus 445 ~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~ 483 (592)
..+..-+|+.++++.. ..++++|+.++....+.
T Consensus 118 ~~~~SPdG~~la~~~~------~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 118 YAGWGPKGQQLIFIFE------NNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp BCCBCSSTTCEEEEET------TEEEEESSSSSCCEEEE
T ss_pred ccEECCCCCEEEEEEC------CeEEEEECCCCceEEEe
Confidence 1111124544444432 36888888877665553
No 257
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=81.90 E-value=48 Score=33.81 Aligned_cols=177 Identities=14% Similarity=0.046 Sum_probs=100.0
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCC--CCCCCcceEEEE--ECCEEEEEecCCCCcccceEEEEeCCCCeE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPS--LNGTKGSLAGAT--IDNKIFAIGGGNGLECFSDVEMLDLDIGKW 432 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~--lp~~r~~~~~~~--~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W 432 (592)
++.||+.--. .+.++++++.......+.. +..| ..+++ .++.||+.-.. ...++++++....-
T Consensus 127 ~~~ly~~D~~-----~~~I~r~~~~g~~~~~~~~~~~~~p---~glavd~~~g~lY~~d~~-----~~~I~~~~~dg~~~ 193 (386)
T 3v65_B 127 RELVFWSDVT-----LDRILRANLNGSNVEEVVSTGLESP---GGLAVDWVHDKLYWTDSG-----TSRIEVANLDGAHR 193 (386)
T ss_dssp TTEEEEEETT-----TTEEEEEETTSCCEEEEECSSCSCC---CCEEEETTTTEEEEEETT-----TTEEEECBTTSCSC
T ss_pred CCeEEEEeCC-----CCcEEEEecCCCCcEEEEeCCCCCc---cEEEEEeCCCeEEEEcCC-----CCeEEEEeCCCCce
Confidence 5788887432 2578999998876655422 2222 12333 37899998542 24788888865543
Q ss_pred EEcc--cccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCEEEEEec
Q 007704 433 IRTR--SMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGKLYALGG 506 (592)
Q Consensus 433 ~~i~--~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~Lyv~GG 506 (592)
+.+. .+..| ..+++- ++.||+.--.. ...++++++....-..+..... ..-.++++- +++||+.-.
T Consensus 194 ~~l~~~~l~~P---~giavdp~~g~ly~td~~~----~~~I~r~~~dG~~~~~~~~~~~-~~PnGlavd~~~~~lY~aD~ 265 (386)
T 3v65_B 194 KVLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEASSMDGSGRRIIADTHL-FWPNGLTIDYAGRRMYWVDA 265 (386)
T ss_dssp EEEECSSCSCE---EEEEEETTTTEEEEEECSS----SCEEEEEETTSCSCEEEECSSC-SCEEEEEEEGGGTEEEEEET
T ss_pred EEeecCCCCCC---cEEEEEcCCCeEEEeccCC----CCEEEEEeCCCCCcEEEEECCC-CCeeeEEEeCCCCEEEEEEC
Confidence 3321 22222 123333 68899874211 3679999987654443322111 112233432 789999854
Q ss_pred CCCCCCCCeEEEEeCCCCeEEEc-C-CCCCCCcceEEEEECCEEEEEecccCCCccccEEEEEc
Q 007704 507 FDGSAMVPSIEVYDPRLGSWMSG-E-PMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFK 568 (592)
Q Consensus 507 ~~~~~~~~~v~~yD~~t~~W~~v-~-~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd 568 (592)
. ...|+++|.....-+.+ . .+.. ..++++.++.||+.--.+ ..|.++|
T Consensus 266 ~-----~~~I~~~d~dG~~~~~~~~~~~~~---P~giav~~~~ly~td~~~------~~V~~~~ 315 (386)
T 3v65_B 266 K-----HHVIERANLDGSHRKAVISQGLPH---PFAITVFEDSLYWTDWHT------KSINSAN 315 (386)
T ss_dssp T-----TTEEEEECTTSCSCEEEECSSCSS---EEEEEEETTEEEEEETTT------TEEEEEE
T ss_pred C-----CCEEEEEeCCCCeeEEEEECCCCC---ceEEEEECCEEEEeeCCC------CeEEEEE
Confidence 2 35799999865332222 2 2322 356677889999976422 4466666
No 258
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=81.50 E-value=46 Score=33.31 Aligned_cols=147 Identities=12% Similarity=0.109 Sum_probs=78.7
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEE--EECCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGA--TIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~--~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
++++++.|+. +.+..++..++.................+ .-+++.++.++.++.. ...++.+|.....+..
T Consensus 187 dg~~l~s~s~------~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~-~~~i~~~~~~~~~~~~ 259 (365)
T 4h5i_A 187 DGKVVAYITG------SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGK-GIVLTKISIKSGNTSV 259 (365)
T ss_dssp TSSEEEEECS------SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSC-CEEEEEEEEETTEEEE
T ss_pred CCceEEeccc------eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcc-eeEEeecccccceecc
Confidence 5666666653 34677777776654332222222222222 3478888887754322 2346667776665543
Q ss_pred cc--cccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCC-CceeEEEEE--CCEEEEEecC
Q 007704 435 TR--SMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRR-RGCHSLAVL--NGKLYALGGF 507 (592)
Q Consensus 435 i~--~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~-R~~~s~v~~--~~~Lyv~GG~ 507 (592)
.. .+......-.++.+ ++++++.|+.+ ..+.+||..+..-.. ..... ...-..+.+ ++++++.|+.
T Consensus 260 ~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D-----~~V~iwd~~~~~~~~--~~~~gH~~~V~~v~fSpdg~~laS~S~ 332 (365)
T 4h5i_A 260 LRSKQVTNRFKGITSMDVDMKGELAVLASND-----NSIALVKLKDLSMSK--IFKQAHSFAITEVTISPDSTYVASVSA 332 (365)
T ss_dssp EEEEEEESSCSCEEEEEECTTSCEEEEEETT-----SCEEEEETTTTEEEE--EETTSSSSCEEEEEECTTSCEEEEEET
T ss_pred eeeeeecCCCCCeEeEEECCCCCceEEEcCC-----CEEEEEECCCCcEEE--EecCcccCCEEEEEECCCCCEEEEEeC
Confidence 32 11111111122222 77888888866 468899998865322 21111 112233444 7888888887
Q ss_pred CCCCCCCeEEEEeCC
Q 007704 508 DGSAMVPSIEVYDPR 522 (592)
Q Consensus 508 ~~~~~~~~v~~yD~~ 522 (592)
++ +|-++|+.
T Consensus 333 D~-----tvrvw~ip 342 (365)
T 4h5i_A 333 AN-----TIHIIKLP 342 (365)
T ss_dssp TS-----EEEEEECC
T ss_pred CC-----eEEEEEcC
Confidence 64 57777764
No 259
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=81.38 E-value=37 Score=32.14 Aligned_cols=141 Identities=11% Similarity=0.066 Sum_probs=77.7
Q ss_pred EEEEECCEEEEEecCCCCcccceEEEEeCCCCe-E--EEcc----cccCcccceEEEEE--CCEEEEEeccCCCCCCCee
Q 007704 399 AGATIDNKIFAIGGGNGLECFSDVEMLDLDIGK-W--IRTR----SMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSA 469 (592)
Q Consensus 399 ~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~-W--~~i~----~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v 469 (592)
+++..++++|+|=| ..+|+++..... . ..+. .+|. ... ++... ++++|+|-| +..
T Consensus 35 Ai~~~~g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~~wp~lp~-~ID-AA~~~~~~~k~yfFkG-------~~y 98 (218)
T 1gen_A 35 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPE-KID-AVYEAPQEEKAVFFAG-------NEY 98 (218)
T ss_dssp EEEEETTEEEEEET-------TEEEEESSTTSCCEEEEEGGGTCTTSCS-CCS-EEEEETTTTEEEEEET-------TEE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCCccCCCEEHHHhcCCCCC-Ccc-EEEEECCCCEEEEEeC-------CEE
Confidence 45567999999987 456666654321 1 1222 2332 222 23232 689999988 568
Q ss_pred EEEeCCCCe--E-EEecc--CCCC-CceeEEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCeEEE-----cC-CC-CC
Q 007704 470 ERFDPREHY--W-TKIAN--MNRR-RGCHSLAVL--NGKLYALGGFDGSAMVPSIEVYDPRLGSWMS-----GE-PM-KL 534 (592)
Q Consensus 470 ~~yD~~t~~--W-~~i~~--~p~~-R~~~s~v~~--~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~-----v~-~l-p~ 534 (592)
|+||-.+.. + ..|.. +|.. ....++... ++++|+|-| +..|+||..+++-.. +. .. ..
T Consensus 99 W~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d~~~~~v~~gyPr~i~~~w~g~ 171 (218)
T 1gen_A 99 WIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNAI 171 (218)
T ss_dssp EEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCEEHHHHSSSC
T ss_pred EEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEECccccccCCCCcchhhccCCC
Confidence 888842100 0 11222 1211 123344443 799999977 468999987764321 11 01 11
Q ss_pred CCcceEEEEEC--CEEEEEecccCCCccccEEEEEcCC
Q 007704 535 SRGYLGAAVVK--EAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 535 ~R~~~s~~v~~--~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
|..-.++...+ +.+|.|=| +..|.||..
T Consensus 172 p~~idaAf~~~~~g~~YfFkg--------~~y~~~~~~ 201 (218)
T 1gen_A 172 PDNLDAVVDLQGGGHSYFFKG--------AYYLKLENQ 201 (218)
T ss_dssp CSSCSEEEECTTTCEEEEEET--------TEEEEEETT
T ss_pred CCCCCEEEEEcCCCcEEEEEC--------CEEEEEECC
Confidence 22223444444 89999987 458888875
No 260
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=81.17 E-value=35 Score=37.24 Aligned_cols=116 Identities=18% Similarity=0.218 Sum_probs=66.6
Q ss_pred EEEECCEEEEEecCCCCcccceEEEEeCCCCe--EEEcccccCc------ccceEEEEECCEEEEEeccCCCCCCCeeEE
Q 007704 400 GATIDNKIFAIGGGNGLECFSDVEMLDLDIGK--WIRTRSMLQK------RFALAAAELNGVLYATGGYDGNEYMNSAER 471 (592)
Q Consensus 400 ~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~--W~~i~~~p~~------R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~ 471 (592)
-++.+++||+.+.. ..++.+|..|++ |+.-...+.. ......++.+++||+... -..++.
T Consensus 64 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~------dg~l~A 131 (582)
T 1flg_A 64 AIVSDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL------DASVVA 131 (582)
T ss_dssp CEEETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET------TTEEEE
T ss_pred cEEECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC------CCEEEE
Confidence 35679999998753 248899998764 8764332211 011234567899988532 246899
Q ss_pred EeCCCCe--EEEeccCCCC--CceeEEEEECC------EEEEEecCCC-CCCCCeEEEEeCCCC--eEEE
Q 007704 472 FDPREHY--WTKIANMNRR--RGCHSLAVLNG------KLYALGGFDG-SAMVPSIEVYDPRLG--SWMS 528 (592)
Q Consensus 472 yD~~t~~--W~~i~~~p~~--R~~~s~v~~~~------~Lyv~GG~~~-~~~~~~v~~yD~~t~--~W~~ 528 (592)
+|.++++ |+.-...+.. ....+-++.++ .||+ |.... ......++.||..+. .|+.
T Consensus 132 lD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 132 LNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIH-GSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEE-CCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred EECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEE-eccccccCCCCEEEEEECCCCCEEeec
Confidence 9998875 8764221111 11112233455 5554 33111 112457999999876 4865
No 261
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=81.16 E-value=11 Score=44.05 Aligned_cols=155 Identities=15% Similarity=0.034 Sum_probs=85.6
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEE-EEeCCCCeEEEc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVE-MLDLDIGKWIRT 435 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~-~yD~~t~~W~~i 435 (592)
+++.++++. ...++.++..+.....+...+..+....... +++.+++++. ...+| +||..+++...+
T Consensus 307 dG~~la~~~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~-----~~~l~~~~d~~~~~~~~l 374 (1045)
T 1k32_A 307 DGDLIAFVS------RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR-----EGDFLGIYDYRTGKAEKF 374 (1045)
T ss_dssp GGGCEEEEE------TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET-----TEEEEEEEETTTCCEEEC
T ss_pred CCCEEEEEE------cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC-----CCceEEEEECCCCCceEe
Confidence 455455544 2468888888777666543222122222223 6665555543 35788 999988876665
Q ss_pred ccccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEECCEEEEEecCCC-----
Q 007704 436 RSMLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVLNGKLYALGGFDG----- 509 (592)
Q Consensus 436 ~~~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~~~~Lyv~GG~~~----- 509 (592)
. .........+.. +++.+++++.+ .+++++|+.++.-..+..............-+++.+++++.+.
T Consensus 375 ~--~~~~~~~~~~~SpDG~~la~~~~~-----~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~ 447 (1045)
T 1k32_A 375 E--ENLGNVFAMGVDRNGKFAVVANDR-----FEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETD 447 (1045)
T ss_dssp C--CCCCSEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTC
T ss_pred c--CCccceeeeEECCCCCEEEEECCC-----CeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCcccccc
Confidence 4 111111222222 56666666543 4799999999887666422221111112222676666665432
Q ss_pred CCCCCeEEEEeCCCCeEEEcC
Q 007704 510 SAMVPSIEVYDPRLGSWMSGE 530 (592)
Q Consensus 510 ~~~~~~v~~yD~~t~~W~~v~ 530 (592)
......++++|..+.....+.
T Consensus 448 ~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 448 GYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp SCCEEEEEEEETTTTEEEECS
T ss_pred CCCCCeEEEEECCCCcEEEee
Confidence 112357999999988766654
No 262
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=80.90 E-value=58 Score=34.05 Aligned_cols=190 Identities=18% Similarity=0.159 Sum_probs=109.1
Q ss_pred CCCeE--EECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEe-------CCCCeEEEcccc-cCcccceEEEEE
Q 007704 381 ANDEW--TSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLD-------LDIGKWIRTRSM-LQKRFALAAAEL 450 (592)
Q Consensus 381 ~t~~W--~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD-------~~t~~W~~i~~~-p~~R~~~~a~~~ 450 (592)
....| +.++..|..-.-|+.|.+++.=|++|=..+......+-++- |..-.=+.+++- ...-..++.-.+
T Consensus 268 ~~spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvkyY 347 (670)
T 3ju4_A 268 HKSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKYY 347 (670)
T ss_dssp TTSCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEEE
T ss_pred ccCCceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhhccccccchhhhh
Confidence 34556 45677777778899999999888998544444334433321 111122344432 223355667778
Q ss_pred CCEEEEEe-ccCCCCCCCeeEEEeCCCCeEEEeccCC-CCCceeEEEEECCEEEEEecCCCC----------C---CCCe
Q 007704 451 NGVLYATG-GYDGNEYMNSAERFDPREHYWTKIANMN-RRRGCHSLAVLNGKLYALGGFDGS----------A---MVPS 515 (592)
Q Consensus 451 ~g~IYV~G-G~~~~~~~~~v~~yD~~t~~W~~i~~~p-~~R~~~s~v~~~~~Lyv~GG~~~~----------~---~~~~ 515 (592)
++.+|++- |......-+.+.+-+.....|+.+.-.. .-....-.+..++.||+||-.... . ....
T Consensus 348 dgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsERA~nEWE~G~pD~RY~a~yPR 427 (670)
T 3ju4_A 348 DGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSERAENEWEAGAPDDRYKASYPR 427 (670)
T ss_dssp TTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEECSSTTCSSTTCCCCCSSCBCCE
T ss_pred CCEEEEEecCcCCCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEeccccccccccCCCcccccccCCc
Confidence 99999886 4555455677888888888998874321 222223345669999999963210 0 1112
Q ss_pred EE--EEe-----CCCCeEEEcCC-------CCCCCcceEEEEECCEEE-EEecccCC----------------CccccEE
Q 007704 516 IE--VYD-----PRLGSWMSGEP-------MKLSRGYLGAAVVKEAIY-VIGGVKNG----------------SEIVDTV 564 (592)
Q Consensus 516 v~--~yD-----~~t~~W~~v~~-------lp~~R~~~s~~v~~~~Iy-v~GG~~~~----------------~~~~~~v 564 (592)
++ +.+ .+.-+|..+.+ ........++++-++-|| +|||.+-- ...-.++
T Consensus 428 tF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd~~np~s~gdN~~k~~~~~~Ghp~dl 507 (670)
T 3ju4_A 428 TFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGEDHFNPWTYGDNSAKDPFKSDGHPSDL 507 (670)
T ss_dssp EEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBCSCCCCTTTTTTTCCTTSTTCCCCEE
T ss_pred eEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCcccCCccccccccccCccccCCCCcce
Confidence 22 222 23345666532 223344455666677765 78986521 1234678
Q ss_pred EEEcCC
Q 007704 565 ERFKEG 570 (592)
Q Consensus 565 ~~Yd~~ 570 (592)
++|.++
T Consensus 508 Y~~ri~ 513 (670)
T 3ju4_A 508 YCYKMK 513 (670)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 888754
No 263
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=80.88 E-value=11 Score=36.61 Aligned_cols=172 Identities=13% Similarity=0.215 Sum_probs=84.8
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCC-eEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCC-CCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPAND-EWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLD-IGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~-~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~-t~~W~~ 434 (592)
++.||+... + +++||+... .|... .+.... ...+..++.||+... ...++.||+. ...|+.
T Consensus 70 ~g~l~v~t~-------~-l~~~d~~g~~~~~~~--~~~~~~-~~~~~~~~~l~v~t~------~~~l~~~d~~g~~~~~~ 132 (330)
T 3hxj_A 70 DGTIYFGSD-------K-VYAINPDGTEKWRFD--TKKAIV-SDFTIFEDILYVTSM------DGHLYAINTDGTEKWRF 132 (330)
T ss_dssp TTEECCSSC-------E-EEEECCCGGGGGGSC--C------CCEEEETTEEEEECT------TSEEEEECTTSCEEEEE
T ss_pred CCcEEEecC-------c-EEEECCCCcEEEEEE--CCCCcc-cCceEECCEEEEEec------CCEEEEEcCCCCEEEEE
Confidence 667776321 2 899997432 34321 111111 122234888887532 2468899987 335654
Q ss_pred cccccCcccceEEEEE-CCEEEEEeccCCCCCCCeeEEEeCCCC-eEEEeccCCCCCceeEEEE-ECCEEEEEecCCCCC
Q 007704 435 TRSMLQKRFALAAAEL-NGVLYATGGYDGNEYMNSAERFDPREH-YWTKIANMNRRRGCHSLAV-LNGKLYALGGFDGSA 511 (592)
Q Consensus 435 i~~~p~~R~~~~a~~~-~g~IYV~GG~~~~~~~~~v~~yD~~t~-~W~~i~~~p~~R~~~s~v~-~~~~Lyv~GG~~~~~ 511 (592)
....+ ...+.+.. ++.||+.. . ...+++||+... .|...... .. ..+++. -++.||+-.
T Consensus 133 ~~~~~---~~~~~~~~~~g~l~vgt-~-----~~~l~~~d~~g~~~~~~~~~~--~~-~~~~~~d~~g~l~v~t------ 194 (330)
T 3hxj_A 133 KTKKA---IYATPIVSEDGTIYVGS-N-----DNYLYAINPDGTEKWRFKTND--AI-TSAASIGKDGTIYFGS------ 194 (330)
T ss_dssp ECSSC---CCSCCEECTTSCEEEEC-T-----TSEEEEECTTSCEEEEEECSS--CC-CSCCEECTTCCEEEES------
T ss_pred cCCCc---eeeeeEEcCCCEEEEEc-C-----CCEEEEECCCCCEeEEEecCC--Cc-eeeeEEcCCCEEEEEe------
Confidence 32211 11222333 67777743 1 146899999822 36554221 11 122333 267777653
Q ss_pred CCCeEEEEeCCC-CeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC--CcEEE
Q 007704 512 MVPSIEVYDPRL-GSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG--QGWEE 575 (592)
Q Consensus 512 ~~~~v~~yD~~t-~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~--~~W~~ 575 (592)
..++.||... ..|+.-... . ...+++.. ++.||+.. .+ ..+.+||+. ..|..
T Consensus 195 --~~l~~~d~~g~~~~~~~~~~--~-~~~~~~~~~~g~l~v~t-~~------~gl~~~~~~g~~~~~~ 250 (330)
T 3hxj_A 195 --DKVYAINPDGTEKWNFYAGY--W-TVTRPAISEDGTIYVTS-LD------GHLYAINPDGTEKWRF 250 (330)
T ss_dssp --SSEEEECTTSCEEEEECCSS--C-CCSCCEECTTSCEEEEE-TT------TEEEEECTTSCEEEEE
T ss_pred --CEEEEECCCCcEEEEEccCC--c-ceeceEECCCCeEEEEc-CC------CeEEEECCCCCEeEEe
Confidence 3588898442 357654221 1 12223333 34677632 21 347777765 34654
No 264
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=80.64 E-value=40 Score=32.02 Aligned_cols=136 Identities=14% Similarity=0.141 Sum_probs=74.4
Q ss_pred ECCEEEEEecCCCCcccceEEEEeCCCCeE--EEcc----cccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCC
Q 007704 403 IDNKIFAIGGGNGLECFSDVEMLDLDIGKW--IRTR----SMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPRE 476 (592)
Q Consensus 403 ~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W--~~i~----~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t 476 (592)
.++++|+|=| +.+|+++.....+ ..+. .+|. .--++...++++|+|-| +.+|+|+..+
T Consensus 27 ~~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~wpgLP~--~IDAA~~~~~~~yfFkG-------~~yw~~~~~~ 90 (219)
T 1hxn_A 27 NHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQWPQGPS--TVDAAFSWEDKLYLIQD-------TKVYVFLTKG 90 (219)
T ss_dssp TTSCEEEEET-------TEEEESSSSSCTTCCEEGGGTCTTSCS--SCSEEEEETTEEEEEET-------TEEEEEECSS
T ss_pred CCCcEEEEeC-------CEEEEEcCCCCCCCceEhhhhccCCCC--CccEEEEECCcEEEecC-------CEEEEEeCCC
Confidence 4799999987 4566666543221 1222 2332 22234445999999987 5688998653
Q ss_pred C-eE-----EEec---cCCCC---CceeEEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCC---eEEEcCCCCCCCcce
Q 007704 477 H-YW-----TKIA---NMNRR---RGCHSLAVL--NGKLYALGGFDGSAMVPSIEVYDPRLG---SWMSGEPMKLSRGYL 539 (592)
Q Consensus 477 ~-~W-----~~i~---~~p~~---R~~~s~v~~--~~~Lyv~GG~~~~~~~~~v~~yD~~t~---~W~~v~~lp~~R~~~ 539 (592)
+ += ..|. .+|.. ..--+++.. ++++|+|-| +..|+||..+. .|...+.+| ...-.
T Consensus 91 ~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~P~~i~~~~~g~p-~~vdA 162 (219)
T 1hxn_A 91 GYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG-------RRLWWLDLKSGAQATWTELPWPH-EKVDG 162 (219)
T ss_dssp SCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET-------TEEEEEEGGGGGGCCCEEECCSC-SCCSE
T ss_pred CceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC-------CEEEEEeCCCCceEhhhcCCCCC-CCcCE
Confidence 2 11 1121 12322 112333333 689999987 46899996542 343322222 12222
Q ss_pred EEEE-----------ECCEEEEEecccCCCccccEEEEEcCC
Q 007704 540 GAAV-----------VKEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 540 s~~v-----------~~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
++.. .++.+|.|-| +..|.||..
T Consensus 163 a~~~~~~~~~~~~~~~~~~~YFFkg--------~~y~r~~~~ 196 (219)
T 1hxn_A 163 ALCMEKPLGPNSCSTSGPNLYLIHG--------PNLYCYRHV 196 (219)
T ss_dssp EEEESSCSSSCCSCSSSCEEEEEET--------TEEEEESSH
T ss_pred EEEccccccccceeccCCeEEEEEC--------CEEEEEeCC
Confidence 2221 2467999888 457888863
No 265
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=80.34 E-value=56 Score=33.51 Aligned_cols=141 Identities=12% Similarity=0.002 Sum_probs=77.9
Q ss_pred EEEEECCEEEEEecCCCCcccceEEEEeCCCCeE--EEc----ccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeE
Q 007704 399 AGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKW--IRT----RSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAE 470 (592)
Q Consensus 399 ~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W--~~i----~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~ 470 (592)
+++.+++++|+|=| ..+|+++.....- ..+ +.+|. ... ++... ++++|+|-| +..|
T Consensus 185 Av~~~~g~~~fFkg-------~~~Wr~~~~~~~~~p~~I~~~wpgLP~-~iD-Aa~~~~~~g~~~fFkg-------~~yW 248 (365)
T 3ba0_A 185 AVTTVGNKIFFFKD-------RFFWLKVSERPKTSVNLISSLWPTLPS-GIE-AAYEIEARNQVFLFKD-------DKYW 248 (365)
T ss_dssp CEEEETTEEEEEET-------TEEEECCSSCCCCCEEEHHHHCSSCCS-SCC-EEEEEGGGTEEEEEET-------TEEE
T ss_pred eEEEcCCeEEEEeC-------CEEEEEcCCCccCCccchhhhccCCCC-Ccc-EEEEecCCCEEEEEeC-------CEEE
Confidence 34557999999977 4566665543211 122 23332 222 23333 789999987 4567
Q ss_pred EEeCCCCe--E-EEecc--CCCC-CceeEEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCeEEE-----cCC-C-CCC
Q 007704 471 RFDPREHY--W-TKIAN--MNRR-RGCHSLAVL--NGKLYALGGFDGSAMVPSIEVYDPRLGSWMS-----GEP-M-KLS 535 (592)
Q Consensus 471 ~yD~~t~~--W-~~i~~--~p~~-R~~~s~v~~--~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~-----v~~-l-p~~ 535 (592)
+|+..... + ..+.. +|.. ..--+++.. ++++|+|-| +..|+||..+++-.. +.. . ..+
T Consensus 249 r~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG-------~~yw~yd~~~~~v~~gyPk~I~~~f~g~p 321 (365)
T 3ba0_A 249 LISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD-------NQYWRYDERRQMMDPGYPKLITKNFQGIG 321 (365)
T ss_dssp ECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCCCHHHHSTTCC
T ss_pred EEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCCcceecCCCCcchhhcCCCCC
Confidence 77643211 1 12222 2321 122344444 589999977 468999987654221 100 1 112
Q ss_pred CcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 536 RGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 536 R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
...-++... ++++|.|=| +..|+||+.
T Consensus 322 ~~iDaA~~~~~g~~YfFkg--------~~ywr~d~~ 349 (365)
T 3ba0_A 322 PKIDAVFYSKNKYYYFFQG--------SNQFEYDFL 349 (365)
T ss_dssp SSCSEEEEETTTEEEEEET--------TEEEEEETT
T ss_pred CccceeeEecCCcEEEEeC--------CEEEEEECC
Confidence 222344445 789999988 459999986
No 266
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=80.29 E-value=22 Score=34.64 Aligned_cols=157 Identities=13% Similarity=0.022 Sum_probs=80.0
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCC----CcceEEEEECCEEEEE----ecCCC--------Ccccc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGT----KGSLAGATIDNKIFAI----GGGNG--------LECFS 420 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~----r~~~~~~~~~~~Iyv~----GG~~~--------~~~~~ 420 (592)
++++|+..... ..+.+||+. ++...+...... +....++.-+++||+. |-... .....
T Consensus 96 dG~l~v~~~~~-----~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~ 169 (305)
T 3dr2_A 96 QQRLVHCEHGR-----RAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHH 169 (305)
T ss_dssp TSCEEEEETTT-----TEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCE
T ss_pred CCCEEEEECCC-----CEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCC
Confidence 67777763211 358888886 666554321111 1112222337889985 42110 11235
Q ss_pred eEEEEeCCCCeEEEcccccCcccceEEEEE-C-CEEEEEeccCCCCCCCeeEEEeCCCCeEEE---eccCCCCCceeEEE
Q 007704 421 DVEMLDLDIGKWIRTRSMLQKRFALAAAEL-N-GVLYATGGYDGNEYMNSAERFDPREHYWTK---IANMNRRRGCHSLA 495 (592)
Q Consensus 421 ~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~-~-g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~---i~~~p~~R~~~s~v 495 (592)
.+++||+.+++++.+..+ .. -...+.. + ..||+..........+.+++||+..+.... +...+... -..++
T Consensus 170 ~v~~~d~~~g~~~~~~~~--~~-p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~-pdgi~ 245 (305)
T 3dr2_A 170 SVYRLPPDGSPLQRMADL--DH-PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGL-PDGFC 245 (305)
T ss_dssp EEEEECSSSCCCEEEEEE--SS-EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSC-CCSEE
T ss_pred eEEEEcCCCCcEEEEecC--CC-CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCC-CCeEE
Confidence 799999988888765411 11 1122322 3 358887542211123578999987654321 11111111 11222
Q ss_pred EE-CCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcC
Q 007704 496 VL-NGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGE 530 (592)
Q Consensus 496 ~~-~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~ 530 (592)
.- ++.||+..+ ..|.+||+.......+.
T Consensus 246 ~d~~G~lwv~~~-------~gv~~~~~~g~~~~~~~ 274 (305)
T 3dr2_A 246 VDRGGWLWSSSG-------TGVCVFDSDGQLLGHIP 274 (305)
T ss_dssp ECTTSCEEECCS-------SEEEEECTTSCEEEEEE
T ss_pred ECCCCCEEEecC-------CcEEEECCCCCEEEEEE
Confidence 22 677887642 35999999766555543
No 267
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=80.16 E-value=33 Score=36.02 Aligned_cols=117 Identities=12% Similarity=-0.106 Sum_probs=61.5
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEEC-CEEEEEecCCC----CcccceEEEEeCCCCe
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATID-NKIFAIGGGNG----LECFSDVEMLDLDIGK 431 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~-~~Iyv~GG~~~----~~~~~~v~~yD~~t~~ 431 (592)
...+||.-....... +.+.++|+.+++-... ++.....+-+.+-+ ..+||.--..+ ....+.+.++|+.+.+
T Consensus 84 ~~~vyV~n~~~~~~~-~~VsVID~~t~~vv~~--I~vG~~Pgia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~ 160 (426)
T 3c75_H 84 ARRVYIQDPAHFAAI-TQQFVIDGSTGRILGM--TDGGFLPHPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL 160 (426)
T ss_dssp TTEEEEEECTTTCSS-EEEEEEETTTTEEEEE--EEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCEEEEECCCcCCCC-CeEEEEECCCCEEEEE--EECCCCCceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence 456777655322111 7899999999865332 22222222222334 45887731100 0123679999999986
Q ss_pred EEEccccc-Ccc-----cceEEEE--ECCEEEEEeccCCCCCCCeeEEEeCCCCeEE
Q 007704 432 WIRTRSML-QKR-----FALAAAE--LNGVLYATGGYDGNEYMNSAERFDPREHYWT 480 (592)
Q Consensus 432 W~~i~~~p-~~R-----~~~~a~~--~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~ 480 (592)
-..--+++ .+| .-+.+++ -+.++||..-. ..+.+.++|+.+++-.
T Consensus 161 vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 161 PIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS----PAPAVGVVDLEGKTFD 213 (426)
T ss_dssp EEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----SSCEEEEEETTTTEEE
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC----CCCeEEEEECCCCeEE
Confidence 54221122 111 1122222 25578887421 1367899999987643
No 268
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=77.64 E-value=59 Score=36.50 Aligned_cols=200 Identities=10% Similarity=-0.052 Sum_probs=97.0
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCC-eEEECCCCCCCCcceEEE-EECC-EEEEEecCCCCcccceEEEEeCCCCeE-
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPAND-EWTSRPSLNGTKGSLAGA-TIDN-KIFAIGGGNGLECFSDVEMLDLDIGKW- 432 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~-~W~~l~~lp~~r~~~~~~-~~~~-~Iyv~GG~~~~~~~~~v~~yD~~t~~W- 432 (592)
+++.++|+-..++.....++++|+.++ +. ++.. .+......+ +-++ .|+.. ..+.......++..++.+..-
T Consensus 185 DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~~~-~~~~~~~~~WspDg~~l~y~-~~d~~~~~~~v~~~~lgt~~~~ 260 (751)
T 2xe4_A 185 EHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IADK-VSGTNGEIVWGPDHTSLFYV-TKDETLRENKVWRHVMGKLQSE 260 (751)
T ss_dssp TTCEEEEEEESSSSSCEEEEEEETTCTTCC--CCCC-EEEECSCCEECSSTTEEEEE-EECTTCCEEEEEEEETTSCGGG
T ss_pred CCCEEEEEEeCCCCceEEEEEEECCCCCEe--CCcc-ccCceeeEEEecCCCEEEEE-EECCCCCCCEEEEEECCCCchh
Confidence 566666654333333356999999987 52 1110 011111111 1244 44443 222222235788888876531
Q ss_pred -EEcccccCcccceEEEEE-CC-EEEEEeccCCCCCCCeeEEEeCCCC--eE--EEeccCCCCCceeEEE-EECCEEEEE
Q 007704 433 -IRTRSMLQKRFALAAAEL-NG-VLYATGGYDGNEYMNSAERFDPREH--YW--TKIANMNRRRGCHSLA-VLNGKLYAL 504 (592)
Q Consensus 433 -~~i~~~p~~R~~~~a~~~-~g-~IYV~GG~~~~~~~~~v~~yD~~t~--~W--~~i~~~p~~R~~~s~v-~~~~~Lyv~ 504 (592)
..+-.-+...+....... ++ .|++.... ...+.++++|+.+. .+ ..+.+-... ..++.. ..++.||+.
T Consensus 261 ~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~---~~~~~l~~~d~~~~~~~~~~~~l~~~~~~-~~~s~~~~~g~~l~~~ 336 (751)
T 2xe4_A 261 DVCLYEEHNPLFSAFMYKAADTNTLCIGSQS---PETAEVHLLDLRKGNAHNTLEIVRPREKG-VRYDVQMHGTSHLVIL 336 (751)
T ss_dssp CEEEEECCCTTCEEEEEECTTSSEEEEEEEC---SSCEEEEEEESSSCTTCCCEEESSCCCTT-CCEEEEEETTTEEEEE
T ss_pred cEEEEecCCCceEEEEEECCCCCEEEEEecC---CCCceEEEEECCCCCCCceeEEeecCCCC-ceEEEeeeeCCEEEEE
Confidence 111111112222222222 44 45544432 13468999999875 46 655332211 112222 227888888
Q ss_pred ecCCCCCCCCeEEEEeCCC-CeEEE-cCCCCCCCcceEEEEECCEEEEEecccCCCccccEEEEEcC
Q 007704 505 GGFDGSAMVPSIEVYDPRL-GSWMS-GEPMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKE 569 (592)
Q Consensus 505 GG~~~~~~~~~v~~yD~~t-~~W~~-v~~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~ 569 (592)
.-.++ .....++.+|..+ ..|+. +-+.........+...++.|++..-.++ ...++++|+
T Consensus 337 t~~~~-a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g----~~~l~~~dl 398 (751)
T 2xe4_A 337 TNEGG-AVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAG----LTRIWTMMA 398 (751)
T ss_dssp ECTTT-CTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETT----EEEEEEEEC
T ss_pred eCCCC-CCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCC----EEEEEEEec
Confidence 65431 1235799999876 57876 4222111122233344677776655433 356888885
No 269
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=77.55 E-value=28 Score=32.41 Aligned_cols=102 Identities=14% Similarity=0.050 Sum_probs=59.9
Q ss_pred ECCEEEEEeeCCCCCCcceEEEEECCCCeE---EECCC----CCCCCcceEEEE-ECCEEEEEecCCCCcccceEEEEeC
Q 007704 356 LNGELYIFGGGDGNSWHNTVESYSPANDEW---TSRPS----LNGTKGSLAGAT-IDNKIFAIGGGNGLECFSDVEMLDL 427 (592)
Q Consensus 356 ~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W---~~l~~----lp~~r~~~~~~~-~~~~Iyv~GG~~~~~~~~~v~~yD~ 427 (592)
.++++|+|-| +.+|+|+..+... +.+.. +|..+...+... .++++|+|-| +..|.||.
T Consensus 60 ~~g~~yfFkg-------~~yw~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG-------~~yw~yd~ 125 (196)
T 3c7x_A 60 KDGKFVFFKG-------DKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG-------NKYYRFNE 125 (196)
T ss_dssp TTSCEEEEET-------TEEEEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET-------TEEEEEET
T ss_pred CCCcEEEecC-------CEEEEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC-------CEEEEEeC
Confidence 4789999988 6789998543110 12222 332222322222 2689999977 57899999
Q ss_pred CCCeEEE-----cccc-cCcccceEEEEE-CC-EEEEEeccCCCCCCCeeEEEeCCCCe
Q 007704 428 DIGKWIR-----TRSM-LQKRFALAAAEL-NG-VLYATGGYDGNEYMNSAERFDPREHY 478 (592)
Q Consensus 428 ~t~~W~~-----i~~~-p~~R~~~~a~~~-~g-~IYV~GG~~~~~~~~~v~~yD~~t~~ 478 (592)
.+++-.. +... ..+..-.++... ++ ++|.|-| +..++||..+.+
T Consensus 126 ~~~~v~~gyPk~i~~~~gip~~idaAf~~~~~~~~YfFkg-------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 126 ELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKG-------NKYWKFNNQKLK 177 (196)
T ss_dssp TTTEECTTCSEEGGGSBTCCSSCSEEEECTTSSEEEEEET-------TEEEEEETTTTE
T ss_pred CcccccCCCCccHHHCCCcCCCcceeEEecCCCEEEEEEC-------CEEEEEECCcce
Confidence 8764321 1111 112222333333 44 8999987 568899987764
No 270
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=77.46 E-value=75 Score=33.36 Aligned_cols=179 Identities=12% Similarity=0.120 Sum_probs=90.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
+++.++.|+.++ .+..||........+... ......+.+ +++.++.|+.+ ..+.+||.....-..
T Consensus 355 ~g~~l~~~~~dg-----~v~~~~~~~~~~~~~~~~---~~~v~~~~~s~dg~~l~~~~~d-----~~v~~~~~~~~~~~~ 421 (577)
T 2ymu_A 355 DGQTIASASDDK-----TVKLWNRNGQLLQTLTGH---SSSVRGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQT 421 (577)
T ss_dssp TSSEEEEEETTS-----EEEEEETTCCEEEEEECC---SSCEEEEEECTTSSCEEEEETT-----SEEEEECTTCCEEEE
T ss_pred CCCEEEEEeCCC-----EEEEEcCCCCEEEEecCC---CCCeEEEEECCCCCEEEEEeCC-----CEEEEEeCCCCEEEE
Confidence 677777777653 467788655444433221 112222222 67777777754 367788854432222
Q ss_pred cccccCcccceEEEE-ECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CCEEEEEecCCCCCC
Q 007704 435 TRSMLQKRFALAAAE-LNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NGKLYALGGFDGSAM 512 (592)
Q Consensus 435 i~~~p~~R~~~~a~~-~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~~Lyv~GG~~~~~~ 512 (592)
+.... . .-.+++. -++++++.|+.+ ..+.+||.....-..+..... .-.+++.. ++++++.|+.++
T Consensus 422 ~~~~~-~-~v~~~~~s~d~~~l~~~~~d-----~~v~~w~~~~~~~~~~~~~~~--~v~~~~~spd~~~las~~~d~--- 489 (577)
T 2ymu_A 422 LTGHS-S-SVWGVAFSPDDQTIASASDD-----KTVKLWNRNGQLLQTLTGHSS--SVRGVAFSPDGQTIASASDDK--- 489 (577)
T ss_dssp EECCS-S-CEEEEEECTTSSEEEEEETT-----SEEEEEETTSCEEEEEECCSS--CEEEEEECTTSCEEEEEETTS---
T ss_pred ecCCC-C-CeEEEEECCCCCEEEEEcCC-----CEEEEEECCCCEEEEEcCCCC--CEEEEEEcCCCCEEEEEeCCC---
Confidence 21111 1 1111222 256667777654 357788876654444432211 11222222 778888887653
Q ss_pred CCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecccCCCccccEEEEEcCC
Q 007704 513 VPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 513 ~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.+.+||.....-..+..- ...-.+++.. ++++++.||.+ ..|.+||..
T Consensus 490 --~i~iw~~~~~~~~~~~~h--~~~v~~l~~s~dg~~l~s~~~d------g~v~lwd~~ 538 (577)
T 2ymu_A 490 --TVKLWNRNGQLLQTLTGH--SSSVRGVAFSPDGQTIASASDD------KTVKLWNRN 538 (577)
T ss_dssp --EEEEEETTSCEEEEEECC--SSCEEEEEECTTSSCEEEEETT------SEEEEECTT
T ss_pred --EEEEEcCCCCEEEEEeCC--CCCEEEEEEcCCCCEEEEEECc------CEEEEEeCC
Confidence 577888654433333211 1111222222 56667777754 347788865
No 271
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=77.44 E-value=78 Score=33.59 Aligned_cols=210 Identities=12% Similarity=-0.002 Sum_probs=99.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCC----eEEECC-------CCCCCCcceEEEEECCEEEEEe--cCCCCcccceEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPAND----EWTSRP-------SLNGTKGSLAGATIDNKIFAIG--GGNGLECFSDVE 423 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~----~W~~l~-------~lp~~r~~~~~~~~~~~Iyv~G--G~~~~~~~~~v~ 423 (592)
..++||-|..+ +.++++|..++ +-...- .....+-++..|.-++ |||-. +..+ .....+.
T Consensus 95 r~~l~v~~l~s-----~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g-~~~g~v~ 167 (462)
T 2ece_A 95 RRFLIVPGLRS-----SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEG-EGPGGIL 167 (462)
T ss_dssp SCEEEEEBTTT-----CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTS-CSCCEEE
T ss_pred CCEEEEccCCC-----CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCC-CCCCeEE
Confidence 34455555433 67999998876 433321 0111222233333456 77742 2222 2347899
Q ss_pred EEeCCCCeEEEccccc-C-cccceEEEEE--CCEEEEEe---------ccCCC----CCCCeeEEEeCCCCeEEEeccCC
Q 007704 424 MLDLDIGKWIRTRSML-Q-KRFALAAAEL--NGVLYATG---------GYDGN----EYMNSAERFDPREHYWTKIANMN 486 (592)
Q Consensus 424 ~yD~~t~~W~~i~~~p-~-~R~~~~a~~~--~g~IYV~G---------G~~~~----~~~~~v~~yD~~t~~W~~i~~~p 486 (592)
++|..|.+=...=+.. . ..+.+..-.. .+.+|+.- |++.. .+.+.+.+||+.+++- +..++
T Consensus 168 vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~--~~tI~ 245 (462)
T 2ece_A 168 MLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR--IHSLT 245 (462)
T ss_dssp EECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE--EEEEE
T ss_pred EEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE--eeEEe
Confidence 9999977533211111 1 1122212111 34445442 23322 3568999999998643 22222
Q ss_pred CCC--ceeEEEEE-----CCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcC-----C------CC---C-----CCcceE
Q 007704 487 RRR--GCHSLAVL-----NGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGE-----P------MK---L-----SRGYLG 540 (592)
Q Consensus 487 ~~R--~~~s~v~~-----~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~-----~------lp---~-----~R~~~s 540 (592)
.+. ....-+.+ +..+|+..-.+-....+.|++|..+.+.|.... . +| . +.. .+
T Consensus 246 vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~-pa 324 (462)
T 2ece_A 246 LGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPL-VT 324 (462)
T ss_dssp SCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCC-CC
T ss_pred cCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCc-ee
Confidence 211 11111112 345676654222222345655544457776543 1 11 0 111 12
Q ss_pred EEEE--CC-EEEEEecccCCCccccEEEEEcCC--CcEEEccccCCC
Q 007704 541 AAVV--KE-AIYVIGGVKNGSEIVDTVERFKEG--QGWEEINSRAIG 582 (592)
Q Consensus 541 ~~v~--~~-~Iyv~GG~~~~~~~~~~v~~Yd~~--~~W~~v~~~p~~ 582 (592)
.+.+ ++ .+||.--. . ++|.+||.. .+.+.+...+++
T Consensus 325 ~I~lS~DGrfLYVSnrg--~----d~VavfdV~d~~~~~lv~~I~tG 365 (462)
T 2ece_A 325 DIDISLDDKFLYLSLWG--I----GEVRQYDISNPFKPVLTGKVKLG 365 (462)
T ss_dssp CEEECTTSCEEEEEETT--T----TEEEEEECSSTTSCEEEEEEECB
T ss_pred EEEECCCCCEEEEEeCC--C----CEEEEEEecCCCCcEEEEEEEeC
Confidence 2223 44 56664322 1 679999975 556666555554
No 272
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=77.37 E-value=1.1e+02 Score=35.18 Aligned_cols=182 Identities=9% Similarity=-0.011 Sum_probs=93.8
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeEEEcc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTR 436 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~ 436 (592)
++++++.|+.++ .+..||..+.+-... ++....-.+++...++.++.|+.+ ..+.++|+.+.+-...
T Consensus 28 dg~~lAsgs~Dg-----~I~lw~~~~~~~~~~--~~~~~~V~~l~fspg~~L~S~s~D-----~~v~lWd~~~~~~~~~- 94 (902)
T 2oaj_A 28 TQNLLAIATVTG-----EVHIYGQQQVEVVIK--LEDRSAIKEMRFVKGIYLVVINAK-----DTVYVLSLYSQKVLTT- 94 (902)
T ss_dssp TTTEEEEEETTS-----EEEEECSTTCEEEEE--CSSCCCEEEEEEETTTEEEEEETT-----CEEEEEETTTCSEEEE-
T ss_pred CCCEEEEEeCCC-----EEEEEeCCCcEEEEE--cCCCCCEEEEEEcCCCEEEEEECc-----CeEEEEECCCCcEEEE-
Confidence 677888888663 677888776554332 111111222333346655566543 5788999987754321
Q ss_pred cccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEec--------cCCCC--CceeEEEEE--CCEEE
Q 007704 437 SMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIA--------NMNRR--RGCHSLAVL--NGKLY 502 (592)
Q Consensus 437 ~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~--------~~p~~--R~~~s~v~~--~~~Ly 502 (592)
+... ..-.++.+ ++..++.|+.+ ..+.+||+.+..-.... ..+.. ..-.+++.. ++.++
T Consensus 95 -~~~~-~~V~~v~~sp~g~~l~sgs~d-----g~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 95 -VFVP-GKITSIDTDASLDWMLIGLQN-----GSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp -EECS-SCEEEEECCTTCSEEEEEETT-----SCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred -EcCC-CCEEEEEECCCCCEEEEEcCC-----CcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence 1111 11112222 45566666654 35788999887643211 01111 111233333 23567
Q ss_pred EEecCCCCCCCCeEEEEeCCCCeEEEc-C-CC----CC---------C-CcceEEEEE--CCEEEEEecccCCCccccEE
Q 007704 503 ALGGFDGSAMVPSIEVYDPRLGSWMSG-E-PM----KL---------S-RGYLGAAVV--KEAIYVIGGVKNGSEIVDTV 564 (592)
Q Consensus 503 v~GG~~~~~~~~~v~~yD~~t~~W~~v-~-~l----p~---------~-R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v 564 (592)
+.|+.+ ..+ +||..+..-... . .. +. . ......+.+ ++..++.|+.++ .|
T Consensus 168 ~~g~~d-----g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg------~i 235 (902)
T 2oaj_A 168 LISYEY-----VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDN------SL 235 (902)
T ss_dssp EEECSS-----CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTC------CE
T ss_pred EEEeCC-----CcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCC------eE
Confidence 777654 357 999988764432 1 10 00 0 011222333 567778787654 48
Q ss_pred EEEcCC
Q 007704 565 ERFKEG 570 (592)
Q Consensus 565 ~~Yd~~ 570 (592)
.+||..
T Consensus 236 ~lWd~~ 241 (902)
T 2oaj_A 236 VFWDAN 241 (902)
T ss_dssp EEEETT
T ss_pred EEEECC
Confidence 888876
No 273
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=77.37 E-value=60 Score=32.20 Aligned_cols=64 Identities=13% Similarity=0.089 Sum_probs=36.9
Q ss_pred CCEEEEEeccCCCCCCCe-eEEEeCCCCeEEE-eccCCCCCceeEEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCC
Q 007704 451 NGVLYATGGYDGNEYMNS-AERFDPREHYWTK-IANMNRRRGCHSLAVL-NGKLYALGGFDGSAMVPSIEVYDPRLG 524 (592)
Q Consensus 451 ~g~IYV~GG~~~~~~~~~-v~~yD~~t~~W~~-i~~~p~~R~~~s~v~~-~~~Lyv~GG~~~~~~~~~v~~yD~~t~ 524 (592)
++.+++.|+.+ .. +.+||+.++.-.. +..-.....-.+++.. ++.+++.|+.+ ..+.+||....
T Consensus 206 ~g~~l~s~s~d-----~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~iw~~~~~ 272 (355)
T 3vu4_A 206 KSDMVATCSQD-----GTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDK-----WTLHVFEIFND 272 (355)
T ss_dssp TSSEEEEEETT-----CSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETT-----CEEEEEESSCC
T ss_pred CCCEEEEEeCC-----CCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECC-----CEEEEEEccCC
Confidence 66777778765 34 7889988765432 2211012222222222 67788888765 36778887653
No 274
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=77.08 E-value=64 Score=32.37 Aligned_cols=169 Identities=14% Similarity=0.030 Sum_probs=96.0
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECC--CCCCCCcceEEEE--ECCEEEEEecCCCCcccceEEEEeCCCCeE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRP--SLNGTKGSLAGAT--IDNKIFAIGGGNGLECFSDVEMLDLDIGKW 432 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~--~lp~~r~~~~~~~--~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W 432 (592)
++.||+.--. .+.++++++.......+. .+..| ..+++ .++.||+.-.. ...++++++....-
T Consensus 84 ~~~ly~~D~~-----~~~I~r~~~~g~~~~~~~~~~~~~p---~glavd~~~g~ly~~d~~-----~~~I~~~~~dG~~~ 150 (349)
T 3v64_C 84 RELVFWSDVT-----LDRILRANLNGSNVEEVVSTGLESP---GGLAVDWVHDKLYWTDSG-----TSRIEVANLDGAHR 150 (349)
T ss_dssp TTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCSCC---CEEEEETTTTEEEEEETT-----TTEEEEEETTSCSC
T ss_pred ccEEEEEecc-----CCceEEEecCCCCceEEEeCCCCCc---cEEEEecCCCeEEEEcCC-----CCeEEEEcCCCCce
Confidence 5788887432 256888998876554432 12222 23333 37899998542 35788898876543
Q ss_pred EEcc--cccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCEEEEEec
Q 007704 433 IRTR--SMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGKLYALGG 506 (592)
Q Consensus 433 ~~i~--~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~Lyv~GG 506 (592)
+.+. .+..| ..+++- ++.||+..-.. ...++++++....-+.+..... ..-.+++.- +++||+.-.
T Consensus 151 ~~l~~~~l~~P---~~iavdp~~g~ly~td~~~----~~~I~r~~~dG~~~~~~~~~~~-~~PnGla~d~~~~~lY~aD~ 222 (349)
T 3v64_C 151 KVLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEASSMDGSGRRIIADTHL-FWPNGLTIDYAGRRMYWVDA 222 (349)
T ss_dssp EEEECTTCSCE---EEEEEETTTTEEEEEECSS----SCEEEEEETTSCSCEESCCSSC-SCEEEEEEETTTTEEEEEET
T ss_pred EEEEeCCCCCc---ceEEEecCcCeEEEeccCC----CCEEEEEeCCCCCcEEEEECCC-CCcceEEEeCCCCEEEEEEC
Confidence 3321 22222 123333 68899875321 3679999988654444422111 112234433 789999854
Q ss_pred CCCCCCCCeEEEEeCCCCeEEEcC--CCCCCCcceEEEEECCEEEEEecc
Q 007704 507 FDGSAMVPSIEVYDPRLGSWMSGE--PMKLSRGYLGAAVVKEAIYVIGGV 554 (592)
Q Consensus 507 ~~~~~~~~~v~~yD~~t~~W~~v~--~lp~~R~~~s~~v~~~~Iyv~GG~ 554 (592)
. ...|+++|+....-+.+. .+.. ..++++.++.||+.-..
T Consensus 223 ~-----~~~I~~~~~dG~~~~~~~~~~~~~---P~giav~~~~ly~td~~ 264 (349)
T 3v64_C 223 K-----HHVIERANLDGSHRKAVISQGLPH---PFAITVFEDSLYWTDWH 264 (349)
T ss_dssp T-----TTEEEEEETTSCSCEEEECSSCSS---EEEEEEETTEEEEEETT
T ss_pred C-----CCEEEEEeCCCCceEEEEeCCCCC---ceEEEEECCEEEEecCC
Confidence 2 357999998754323222 2322 35666788999997543
No 275
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=76.98 E-value=67 Score=32.59 Aligned_cols=78 Identities=10% Similarity=0.110 Sum_probs=43.7
Q ss_pred CCEEEEEecCCC----CCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCE-EEEEecccCCCccccEEEEEcCCC
Q 007704 498 NGKLYALGGFDG----SAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEA-IYVIGGVKNGSEIVDTVERFKEGQ 571 (592)
Q Consensus 498 ~~~Lyv~GG~~~----~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~-Iyv~GG~~~~~~~~~~v~~Yd~~~ 571 (592)
++++|+...... ....++++++|+.+.+- +..++.+...++++.- +++ +++++...+ ++|.+||. .
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v--v~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~-----~~V~ViD~-~ 349 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT--SSQISLGHDVDAISVAQDGGPDLYALSAGT-----EVLHIYDA-G 349 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEE--EEEEECCCCcCeEEECCCCCeEEEEEcCCC-----CeEEEEEC-C
Confidence 578998754211 12346899999987654 2223334344555544 444 444333211 67999998 4
Q ss_pred cEEEccc-cCCCC
Q 007704 572 GWEEINS-RAIGK 583 (592)
Q Consensus 572 ~W~~v~~-~p~~~ 583 (592)
+++.+.. .+.|.
T Consensus 350 t~~vv~~i~~vG~ 362 (373)
T 2mad_H 350 AGDQDQSTVELGS 362 (373)
T ss_pred CCCEEeeecCCCC
Confidence 5555555 44553
No 276
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=76.93 E-value=67 Score=32.58 Aligned_cols=100 Identities=12% Similarity=-0.121 Sum_probs=51.9
Q ss_pred eEEEEECCCCeEEECCCCCCCCcceEEEEEC-CEEEEEecCCCC----cccceEEEEeCCCCeEEEccccc-Cccc----
Q 007704 374 TVESYSPANDEWTSRPSLNGTKGSLAGATID-NKIFAIGGGNGL----ECFSDVEMLDLDIGKWIRTRSML-QKRF---- 443 (592)
Q Consensus 374 ~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~-~~Iyv~GG~~~~----~~~~~v~~yD~~t~~W~~i~~~p-~~R~---- 443 (592)
.+.+||+.+.+-. ..++.....+-..+-+ ..+|+..-.... ...+.+.+||+.+.+-...-+++ .+|.
T Consensus 48 ~v~v~D~~t~~~~--~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~ 125 (373)
T 2mad_H 48 QQWVLDAGSGSIL--GHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGP 125 (373)
T ss_pred EEEEEECCCCeEE--EEecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCC
Confidence 7899999887643 3344333333333334 468887522110 12367889999876432211122 1111
Q ss_pred -ceEEEE--ECCEEEEEeccCCCCCCCeeEEEeCCCCeEE
Q 007704 444 -ALAAAE--LNGVLYATGGYDGNEYMNSAERFDPREHYWT 480 (592)
Q Consensus 444 -~~~a~~--~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~ 480 (592)
-...+. -+..+|+..-. ..+.+.++| .+++-.
T Consensus 126 ~p~~~~~spDG~~l~v~n~~----~~~~v~viD-~t~~~~ 160 (373)
T 2mad_H 126 YSWMNANTPNNADLLFFQFA----AGPAVGLVV-QGGSSD 160 (373)
T ss_pred CccceEECCCCCEEEEEecC----CCCeEEEEE-CCCCEE
Confidence 112222 25567776421 125788999 877643
No 277
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=75.51 E-value=59 Score=33.46 Aligned_cols=147 Identities=11% Similarity=0.035 Sum_probs=82.4
Q ss_pred CCEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCe-EE
Q 007704 404 DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHY-WT 480 (592)
Q Consensus 404 ~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~-W~ 480 (592)
+++||+.... ...+.++|+.+++-..+.... ...+ .+.. ++.+|+...... ..++++|+.+.. ..
T Consensus 141 ~g~lyv~d~~-----~~~I~~id~~~g~~~~~~~~~--~~~~-ia~~~~g~~l~~~d~~~~----~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 141 NNTVLAYQRD-----DPRVRLISVDDNKVTTVHPGF--KGGK-PAVTKDKQRVYSIGWEGT----HTVYVYMKASGWAPT 208 (409)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTTEEEEEEETC--CBCB-CEECTTSSEEEEEBSSTT----CEEEEEEGGGTTCEE
T ss_pred CCCEEEEecC-----CCcEEEEECCCCEEEEeeccC--CCCc-eeEecCCCcEEEEecCCC----ceEEEEEcCCCceeE
Confidence 6889998752 257899999988766543221 1122 2222 456777653221 278999987643 33
Q ss_pred EeccCC--CCCceeEEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcC---CCCCCCcc-e-EEEEE--CCEEE
Q 007704 481 KIANMN--RRRGCHSLAVL--NGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGE---PMKLSRGY-L-GAAVV--KEAIY 549 (592)
Q Consensus 481 ~i~~~p--~~R~~~s~v~~--~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~---~lp~~R~~-~-s~~v~--~~~Iy 549 (592)
.+.... .....+++++. ++.||+... ...+++||+.+.....+. ........ . .+++. ++.||
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECT------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 442111 11222333333 688999432 247999999887765542 11111122 2 45554 57899
Q ss_pred EEecccCCCccccEEEEEcCCCcEE
Q 007704 550 VIGGVKNGSEIVDTVERFKEGQGWE 574 (592)
Q Consensus 550 v~GG~~~~~~~~~~v~~Yd~~~~W~ 574 (592)
+....+ +.|++||+.....
T Consensus 283 v~d~~~------~~I~~~~~~g~~~ 301 (409)
T 3hrp_A 283 MSDQNL------SSVYKITPDGECE 301 (409)
T ss_dssp EEETTT------TEEEEECTTCCEE
T ss_pred EEeCCC------CEEEEEecCCCEE
Confidence 875432 5699999873333
No 278
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=75.51 E-value=37 Score=34.26 Aligned_cols=64 Identities=13% Similarity=0.124 Sum_probs=35.1
Q ss_pred CCEEEEEeccCCCCCCCeeEEEeCCCC--eEEEeccCC----CCCceeEEEEE--CC-EEEEEecCCCCCCCCeEEEEeC
Q 007704 451 NGVLYATGGYDGNEYMNSAERFDPREH--YWTKIANMN----RRRGCHSLAVL--NG-KLYALGGFDGSAMVPSIEVYDP 521 (592)
Q Consensus 451 ~g~IYV~GG~~~~~~~~~v~~yD~~t~--~W~~i~~~p----~~R~~~s~v~~--~~-~Lyv~GG~~~~~~~~~v~~yD~ 521 (592)
++.+++.| .+ ..+.+||+.+. .+..+...+ ........+.+ ++ .+++.|+.++ .+.+||.
T Consensus 188 ~~~~l~s~-~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg-----~i~iwd~ 256 (447)
T 3dw8_B 188 DYETYLSA-DD-----LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG-----TIRLCDM 256 (447)
T ss_dssp TSSEEEEE-CS-----SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS-----CEEEEET
T ss_pred CCCEEEEe-CC-----CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC-----eEEEEEC
Confidence 45566655 33 46888998832 233221111 11112223333 44 7888888664 5888998
Q ss_pred CCCe
Q 007704 522 RLGS 525 (592)
Q Consensus 522 ~t~~ 525 (592)
.+..
T Consensus 257 ~~~~ 260 (447)
T 3dw8_B 257 RASA 260 (447)
T ss_dssp TTCS
T ss_pred cCCc
Confidence 8765
No 279
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=73.92 E-value=5.5 Score=38.32 Aligned_cols=101 Identities=17% Similarity=0.151 Sum_probs=59.3
Q ss_pred ECCEEEEEeeCCCCCCcceEEEEE--CCC--CeEE----EC----CCCCC---C-CcceEEEE-ECCEEEEEecCCCCcc
Q 007704 356 LNGELYIFGGGDGNSWHNTVESYS--PAN--DEWT----SR----PSLNG---T-KGSLAGAT-IDNKIFAIGGGNGLEC 418 (592)
Q Consensus 356 ~~~~Iyv~GG~~~~~~~~~v~~yd--~~t--~~W~----~l----~~lp~---~-r~~~~~~~-~~~~Iyv~GG~~~~~~ 418 (592)
.++++|+|-| +.+|+|+ +.+ ..-. .+ +.||. + ....+... .++++|+|-|
T Consensus 71 ~~g~~~fFKg-------~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~IDAA~~~~~~~k~yfFkG------ 137 (227)
T 3lp9_A 71 ENNEAFIFYE-------NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGIDAAYRSTRGKEVYLFKG------ 137 (227)
T ss_dssp STTEEEEEET-------TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCSEEEECSSTTEEEEEET------
T ss_pred CCCEEEEEeC-------CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCcccEEEEECCCCEEEEEEC------
Confidence 5899999998 6789998 321 1111 11 12331 2 22222222 2689999987
Q ss_pred cceEEEEeCCCCeEEE-----cc-cccC------cccceEEEE--ECCEEEEEeccCCCCCCCeeEEEeCCCC
Q 007704 419 FSDVEMLDLDIGKWIR-----TR-SMLQ------KRFALAAAE--LNGVLYATGGYDGNEYMNSAERFDPREH 477 (592)
Q Consensus 419 ~~~v~~yD~~t~~W~~-----i~-~~p~------~R~~~~a~~--~~g~IYV~GG~~~~~~~~~v~~yD~~t~ 477 (592)
+.+|+||..+++-.. +. .+|. +..--++.. .++++|+|-| +..|+||..+.
T Consensus 138 -~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg-------~~Ywr~d~~~~ 202 (227)
T 3lp9_A 138 -DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD-------DHYARVKVTPX 202 (227)
T ss_dssp -TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET-------TEEEEEECCSS
T ss_pred -CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC-------CEEEEEECCcc
Confidence 689999987664321 11 1221 122233333 3589999988 56789998765
No 280
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=72.53 E-value=87 Score=31.82 Aligned_cols=169 Identities=14% Similarity=0.068 Sum_probs=95.7
Q ss_pred ceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEEccc--ccCcccceEEE
Q 007704 373 NTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRS--MLQKRFALAAA 448 (592)
Q Consensus 373 ~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~--~p~~R~~~~a~ 448 (592)
+.+..+++.......+... ...-.+++.. ++.||+.-- ....++++++.....+.+.. +..+ .+.+.-
T Consensus 96 ~~I~~i~~~~~~~~~~~~~--~~~~~gl~~d~~~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~~~~~p-~glavd 167 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDV-----TLDRILRANLNGSNVEEVVSTGLESP-GGLAVD 167 (386)
T ss_dssp SCEEEECTTSCCCEEEECS--CSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCCEEEEECSSCSCC-CCEEEE
T ss_pred ccceeeccCCCcEEEEecC--CCccEEEEEecCCCeEEEEeC-----CCCcEEEEecCCCCcEEEEeCCCCCc-cEEEEE
Confidence 4688888887766554321 1222334433 678998853 23578999998876655422 2222 222222
Q ss_pred EECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEec--cCCCCCceeEEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCC
Q 007704 449 ELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIA--NMNRRRGCHSLAVL--NGKLYALGGFDGSAMVPSIEVYDPRLG 524 (592)
Q Consensus 449 ~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~--~~p~~R~~~s~v~~--~~~Lyv~GG~~~~~~~~~v~~yD~~t~ 524 (592)
..++.||+.-.. ...++++++....-..+. .+..|+ .+++- ++.||+..-. ....|+++++...
T Consensus 168 ~~~g~lY~~d~~-----~~~I~~~~~dg~~~~~l~~~~l~~P~---giavdp~~g~ly~td~~----~~~~I~r~~~dG~ 235 (386)
T 3v65_B 168 WVHDKLYWTDSG-----TSRIEVANLDGAHRKVLLWQSLEKPR---AIALHPMEGTIYWTDWG----NTPRIEASSMDGS 235 (386)
T ss_dssp TTTTEEEEEETT-----TTEEEECBTTSCSCEEEECSSCSCEE---EEEEETTTTEEEEEECS----SSCEEEEEETTSC
T ss_pred eCCCeEEEEcCC-----CCeEEEEeCCCCceEEeecCCCCCCc---EEEEEcCCCeEEEeccC----CCCEEEEEeCCCC
Confidence 237899997643 257888888765433332 222232 34443 6889987532 1357999998754
Q ss_pred eEEEcC--CCCCCCcceEEEEE--CCEEEEEecccCCCccccEEEEEcCC
Q 007704 525 SWMSGE--PMKLSRGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 525 ~W~~v~--~lp~~R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.-+.+. .+.. ..++++- ++.||+.-... +.|+++|+.
T Consensus 236 ~~~~~~~~~~~~---PnGlavd~~~~~lY~aD~~~------~~I~~~d~d 276 (386)
T 3v65_B 236 GRRIIADTHLFW---PNGLTIDYAGRRMYWVDAKH------HVIERANLD 276 (386)
T ss_dssp SCEEEECSSCSC---EEEEEEEGGGTEEEEEETTT------TEEEEECTT
T ss_pred CcEEEEECCCCC---eeeEEEeCCCCEEEEEECCC------CEEEEEeCC
Confidence 333332 2211 2344443 67899875432 568888876
No 281
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=72.00 E-value=48 Score=33.63 Aligned_cols=184 Identities=12% Similarity=0.174 Sum_probs=94.0
Q ss_pred CCEEEEEeeC----C--C--CCCcceEEEEECC---CC--eEEE-CCCCCC--------CCcceEEEEE--CCEEEEEec
Q 007704 357 NGELYIFGGG----D--G--NSWHNTVESYSPA---ND--EWTS-RPSLNG--------TKGSLAGATI--DNKIFAIGG 412 (592)
Q Consensus 357 ~~~Iyv~GG~----~--~--~~~~~~v~~yd~~---t~--~W~~-l~~lp~--------~r~~~~~~~~--~~~Iyv~GG 412 (592)
.++|+++--. + + ....+.+.+||+. ++ .|.. ++.... ......-.++ +|.+||.+.
T Consensus 76 ~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s 155 (334)
T 2p9w_A 76 SKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFA 155 (334)
T ss_dssp CCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEE
T ss_pred CCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCC
Confidence 5788886321 0 1 1124679999988 44 4543 211111 1112222233 689999865
Q ss_pred CCCCcccceEEEEeCCCCe---EEEcccccCcccceEEEEE---CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccC-
Q 007704 413 GNGLECFSDVEMLDLDIGK---WIRTRSMLQKRFALAAAEL---NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANM- 485 (592)
Q Consensus 413 ~~~~~~~~~v~~yD~~t~~---W~~i~~~p~~R~~~~a~~~---~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~- 485 (592)
.. +..++++++.... |-.-.+....+.+....++ ++.|++..+ . ..+++||+.+.....++..
T Consensus 156 ~~----~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~-----g~L~~fD~~~pv~~~v~~~~ 225 (334)
T 2p9w_A 156 LG----MPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-P-----RALTAFDVSKPYAWPEPVKI 225 (334)
T ss_dssp ES----SCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-S-----SSEEEEECSSSSCCCEECEE
T ss_pred CC----CCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-C-----CeEEEEcCCCCcceeecccc
Confidence 22 1569999997542 5433333344555555444 445666654 2 4689999885433122110
Q ss_pred -C---CCCceeE--EEEECCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcC---CCCC---CCcceEEEE----ECCEEE
Q 007704 486 -N---RRRGCHS--LAVLNGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGE---PMKL---SRGYLGAAV----VKEAIY 549 (592)
Q Consensus 486 -p---~~R~~~s--~v~~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~---~lp~---~R~~~s~~v----~~~~Iy 549 (592)
. .....-. .+..+|+++++.-. .+.++.+-...+ |+... ..|. ++...+.++ .+++||
T Consensus 226 ~G~~~~~~~~dgilp~~~~G~vllV~~~-----~~~~~~l~S~Dg-W~sa~~~g~~~~~~~~~g~tt~t~~~~~~~~~iY 299 (334)
T 2p9w_A 226 NGDFGTLSGTEKIVTVPVGNESVLVGAR-----APYAISFRSWDN-WKSANIKKTKRSELQNSGFTAVADYYQGSEQGLY 299 (334)
T ss_dssp SSCCCCCTTEEEEEEEEETTEEEEEEEE-----TTEEEEEECSST-TSEEEEEEEECGGGGSSCEEEEEEEEETTEEEEE
T ss_pred cCCcccccCcccccccccCCEEEEEEcC-----CCCEEEEECCCC-cceeEEeeeecCccccCceeEEEEeccccCCeEE
Confidence 0 1111122 22358888555432 123455544444 87642 2222 455555555 468999
Q ss_pred EEecccC
Q 007704 550 VIGGVKN 556 (592)
Q Consensus 550 v~GG~~~ 556 (592)
++.+.-+
T Consensus 300 vv~~~f~ 306 (334)
T 2p9w_A 300 AVSAFFD 306 (334)
T ss_dssp EEECCGG
T ss_pred EEeeecC
Confidence 9986543
No 282
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=71.81 E-value=79 Score=31.02 Aligned_cols=187 Identities=12% Similarity=0.043 Sum_probs=101.3
Q ss_pred eEEEEE--CCEEEEEeeCCCCCCcceEEEEECCC----CeEEEC-C-CCCCCCcceEEEE--ECCEEEEEecCCCCcccc
Q 007704 351 ASAAML--NGELYIFGGGDGNSWHNTVESYSPAN----DEWTSR-P-SLNGTKGSLAGAT--IDNKIFAIGGGNGLECFS 420 (592)
Q Consensus 351 ~s~v~~--~~~Iyv~GG~~~~~~~~~v~~yd~~t----~~W~~l-~-~lp~~r~~~~~~~--~~~~Iyv~GG~~~~~~~~ 420 (592)
++++.. ++.||+.-.. .+.++++++.+ .....+ + .+..| ..+++ .++.||+.-.. ..
T Consensus 33 ~g~~~d~~~~~ly~~D~~-----~~~I~~~~~~g~~~~~~~~~~~~~~~~~p---~glavd~~~~~ly~~d~~-----~~ 99 (316)
T 1ijq_A 33 VALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQAP---DGLAVDWIHSNIYWTDSV-----LG 99 (316)
T ss_dssp EEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEECSSCSCC---CEEEEETTTTEEEEEETT-----TT
T ss_pred EEEEEEeCCCEEEEEECC-----CCcEEEEECCCCCCCcccEEEEeCCCCCc---CEEEEeecCCeEEEEECC-----CC
Confidence 444444 5789998543 25788999876 222221 1 12222 23444 37899998532 35
Q ss_pred eEEEEeCCCCeEEEcc--cccCcccceEEEE--ECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEE
Q 007704 421 DVEMLDLDIGKWIRTR--SMLQKRFALAAAE--LNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAV 496 (592)
Q Consensus 421 ~v~~yD~~t~~W~~i~--~~p~~R~~~~a~~--~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~ 496 (592)
.++++|+....-+.+. .+..| ...++ .++.||+..-. ....++++++....-+.+.... -..-.+++.
T Consensus 100 ~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~----~~~~I~~~~~dG~~~~~~~~~~-~~~P~gla~ 171 (316)
T 1ijq_A 100 TVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIYSLVTEN-IQWPNGITL 171 (316)
T ss_dssp EEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECS----SSCEEEEEETTSCCEEEEECSS-CSCEEEEEE
T ss_pred EEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccC----CCCeEEEEcCCCCCeEEEEECC-CCCceEEEE
Confidence 7889998765433321 22222 12333 27899987521 1257899998765444442211 122233444
Q ss_pred E--CCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCC-CCCCcceEEEEECCEEEEEecccCCCccccEEEEEcC
Q 007704 497 L--NGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPM-KLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKE 569 (592)
Q Consensus 497 ~--~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~l-p~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~ 569 (592)
- +++||+.... ...|+++|.....-+.+... .......++++.++.+|+.-..+ +.|.++|+
T Consensus 172 d~~~~~lY~~D~~-----~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~------~~V~~~~~ 236 (316)
T 1ijq_A 172 DLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIIN------EAIFSANR 236 (316)
T ss_dssp ETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTT------TEEEEEET
T ss_pred eccCCEEEEEECC-----CCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCC------CeEEEEeC
Confidence 3 6899998643 35799999875433333211 11123356677788999876322 34666664
No 283
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=71.75 E-value=1e+02 Score=34.42 Aligned_cols=171 Identities=11% Similarity=0.080 Sum_probs=85.8
Q ss_pred EEEEECCCCeEEECCCCCCCCc-ceEEEEE--C-CEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEE-
Q 007704 375 VESYSPANDEWTSRPSLNGTKG-SLAGATI--D-NKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAE- 449 (592)
Q Consensus 375 v~~yd~~t~~W~~l~~lp~~r~-~~~~~~~--~-~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~- 449 (592)
++.-+-...+|..+...|.... ...++.. + +.+|+.+. . .+++-.-.-.+|+.+...|... ....
T Consensus 504 i~~S~DgG~tW~~~~~~p~~~~~~~~i~~~~~~~~~~~a~~~-~------~v~~S~D~G~tW~~~~~~~~~~---~i~~~ 573 (737)
T 2cn3_A 504 ISFSYDGGRNWFQPPNEAPNSVGGGSVAVAADAKSVIWTPEN-A------SPAVTTDNGNSWKVCTNLGMGA---VVASD 573 (737)
T ss_dssp EEEESSTTSSCBCCSCCCSCSSCCSEEEECTTSSCEEEECTT-S------CCEEESSTTSSCEECBTCCTTC---EEEEC
T ss_pred EEEeCCCCCCCcccccCCccccCCceEEEEeCCCCEEEEeCC-C------eEEEECCCCCCCccCCCCCCCc---eEEEE
Confidence 4444445678988644443211 1122222 2 34555443 1 2332222346899987554431 1111
Q ss_pred --ECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEec--cCCCCCceeEEEEE---CCEEEEEecCCCCCCCCeEEEEeCC
Q 007704 450 --LNGVLYATGGYDGNEYMNSAERFDPREHYWTKIA--NMNRRRGCHSLAVL---NGKLYALGGFDGSAMVPSIEVYDPR 522 (592)
Q Consensus 450 --~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~--~~p~~R~~~s~v~~---~~~Lyv~GG~~~~~~~~~v~~yD~~ 522 (592)
-.+.+|+++. ..+++=.=...+|+.+. .+|. ....+... ++.||+.+.. ..+++-+-.
T Consensus 574 ~~~~~~~~a~~~-------g~v~~S~DgG~tW~~~~~~~~p~--~~~~i~~~~~~~g~l~~~~~~------g~l~~S~D~ 638 (737)
T 2cn3_A 574 RVNGKKFYAFYN-------GKFYISTDGGLTFTDTKAPQLPK--SVNKIKAVPGKEGHVWLAARE------GGLWRSTDG 638 (737)
T ss_dssp SSCTTCEEEEET-------TEEEEESSTTSBCEECCCSSCCS--CCSEEEEETTEEEEEEEECBT------TCEEEESST
T ss_pred ecCCCEEEEecC-------CEEEEECCCCcCcccccCCCCCC--ccceEEEEeCCCCEEEEEeCC------CcEEEEeCC
Confidence 2456777651 23444333346799874 3443 22234433 4678887643 236665555
Q ss_pred CCeEEEcCCCCCCCcceEEEE---E-C---CEEEEEecccCCCccccEEEEEcCC-CcEEEcc
Q 007704 523 LGSWMSGEPMKLSRGYLGAAV---V-K---EAIYVIGGVKNGSEIVDTVERFKEG-QGWEEIN 577 (592)
Q Consensus 523 t~~W~~v~~lp~~R~~~s~~v---~-~---~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~W~~v~ 577 (592)
-.+|+.+..++.. ..+.+ . + ..||++|..... ..|++-+-. .+|+.+.
T Consensus 639 G~tW~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~g~~g~~----~gl~~S~D~G~tW~~~~ 694 (737)
T 2cn3_A 639 GYTFEKLSNVDTA---HVVGFGKAAPGQDYMAIYITGKIDNV----LGFFRSDDAGKTWVRIN 694 (737)
T ss_dssp TSSCEECTTCSEE---EEEEEECCCTTCSSCEEEEEEEETTE----EEEEEESSTTSSCEECS
T ss_pred CcccEECcCCCcc---ceEEEeecCCCCCCcEEEEEEecCCc----ceEEEeCCCCCCCEecc
Confidence 5799999643321 22222 1 2 268888743211 236665555 8999996
No 284
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=71.20 E-value=34 Score=38.28 Aligned_cols=180 Identities=13% Similarity=0.079 Sum_probs=95.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCC----eEEEC-C-CCCCCCcceEEEE--ECCEEEEEecCCCCcccceEEEEeCC
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPAND----EWTSR-P-SLNGTKGSLAGAT--IDNKIFAIGGGNGLECFSDVEMLDLD 428 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~----~W~~l-~-~lp~~r~~~~~~~--~~~~Iyv~GG~~~~~~~~~v~~yD~~ 428 (592)
++.||+.--. ...|+++++.+. .-..+ . .+..| ..+++ .+++||+.-. ....++++++.
T Consensus 417 ~~~Ly~sD~~-----~~~I~~~~~~g~~~~~~~~~~i~~~~~~P---~glavD~~~g~LY~tD~-----~~~~I~v~d~d 483 (699)
T 1n7d_A 417 SNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQAP---DGLAVDWIHSNIYWTDS-----VLGTVSVADTK 483 (699)
T ss_dssp TTEEEECCTT-----TTSBEEEESCCCCC-CCCCCBCCSCC--C---CCEECCCSSSBCEECCT-----TTSCEEEEBSS
T ss_pred cCeEEEEecC-----CCeEEEEecCCCCCCcceEEEEeCCCCCc---ceEEEEeeCCcEEEEec-----cCCeEEEEecC
Confidence 5778876322 245788887651 11111 1 11111 22332 4678998642 23578899987
Q ss_pred CCeEEEcc--cccCcccceEEEE--ECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEec--cCCCCCceeEEEEE--CCE
Q 007704 429 IGKWIRTR--SMLQKRFALAAAE--LNGVLYATGGYDGNEYMNSAERFDPREHYWTKIA--NMNRRRGCHSLAVL--NGK 500 (592)
Q Consensus 429 t~~W~~i~--~~p~~R~~~~a~~--~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~--~~p~~R~~~s~v~~--~~~ 500 (592)
...-+.+. .+..|+ .+++ .++.||+..- .....|+++++....-+.+. .+..|+ ++++- +++
T Consensus 484 g~~~~~l~~~~~~~P~---giavDp~~g~ly~td~----~~~~~I~~~~~dG~~~~~l~~~~l~~Pn---Glavd~~~~~ 553 (699)
T 1n7d_A 484 GVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDW----GTPAKIKKGGLNGVDIYSLVTENIQWPN---GITLDLLSGR 553 (699)
T ss_dssp SCCEEEECCCSSCCCC---CEECCSSSSCCEECCC----SSSCCEEBCCSSSCCCCEESCSSCSSCC---CEEECTTTCC
T ss_pred CCceEEEEeCCCCCcc---eEEEccCCCcEEEccc----CCCCeEEEEeCCCCCeeEEEeCCCCCcc---EEEEeccCCE
Confidence 76544432 222232 2222 2678887641 11256788887654433332 222222 23332 578
Q ss_pred EEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCC-CCCcceEEEEECCEEEEEecccCCCccccEEEEEcCC
Q 007704 501 LYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMK-LSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 501 Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp-~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
||+.-.. ...|+++|+....-+.+.... ......++++.++.||+.-... +.|.++|+.
T Consensus 554 LY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~------~~V~~~d~~ 613 (699)
T 1n7d_A 554 LYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIIN------EAIFSANRL 613 (699)
T ss_dssp EEEEETT-----TTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTT------TCEEEEETT
T ss_pred EEEEecC-----CCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCC------CeEEEEEcc
Confidence 9998642 457999998754434433211 1122356677788999886432 458888864
No 285
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=70.70 E-value=43 Score=35.11 Aligned_cols=77 Identities=18% Similarity=0.263 Sum_probs=45.1
Q ss_pred CCEEEEEecCCC--C--CCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-C-C-EEEEEecccCCCccccEEEEEcCC
Q 007704 498 NGKLYALGGFDG--S--AMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-K-E-AIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 498 ~~~Lyv~GG~~~--~--~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~-~-~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
++++|+.-.... . ...+++.++|+.+.+= +..++.+....++++. + . .+|+..+.+ ++|.+||.
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv--v~~I~vg~~P~gia~spDg~~~lyv~n~~s------~~VsVID~- 400 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGER--INKIELGHEIDSINVSQDAEPLLYALSAGT------QTLHIYDA- 400 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE--EEEEEEEEEECEEEECCSSSCEEEEEETTT------TEEEEEET-
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCeE--EEEEECCCCcCeEEEccCCCEEEEEEcCCC------CeEEEEEC-
Confidence 578999743211 1 1246899999887643 3333344444455444 3 3 566655432 67999998
Q ss_pred CcEEEcccc-CCCC
Q 007704 571 QGWEEINSR-AIGK 583 (592)
Q Consensus 571 ~~W~~v~~~-p~~~ 583 (592)
.+|+.+... +.+.
T Consensus 401 ~t~kvv~tI~~vG~ 414 (426)
T 3c75_H 401 ATGEELRSVDQLGR 414 (426)
T ss_dssp TTCCEEEEECCCSS
T ss_pred CCCCEEEEecCCCC
Confidence 566666553 4553
No 286
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=66.98 E-value=11 Score=24.93 Aligned_cols=33 Identities=24% Similarity=0.239 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHhhhhHhHHHHHHHHHHHHHH
Q 007704 264 IINELIKEVAELKAFKTEQTLKMKELEQKLVDA 296 (592)
Q Consensus 264 ~i~~l~~e~~~l~~~~~~~~~~~~~l~~~~~~~ 296 (592)
..++|..+++++..+..++..+...|++.+.++
T Consensus 2 RMnQLE~KVEeLl~~~~~Le~eV~RLk~ll~~~ 34 (36)
T 1kd8_B 2 KVKQLKAKVEELKSKLWHLKNKVARLKKKNAEC 34 (36)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhHHHHHHHHHHHHHhccc
Confidence 357899999999999999999888888776654
No 287
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=65.51 E-value=1e+02 Score=29.88 Aligned_cols=134 Identities=13% Similarity=0.034 Sum_probs=71.4
Q ss_pred ceEEEEECCCCeEEECC-CCCCCCcceEEEEE-CC-EEEEEecCCCCcccceEEEEeCCC---CeEEEcccccCcccceE
Q 007704 373 NTVESYSPANDEWTSRP-SLNGTKGSLAGATI-DN-KIFAIGGGNGLECFSDVEMLDLDI---GKWIRTRSMLQKRFALA 446 (592)
Q Consensus 373 ~~v~~yd~~t~~W~~l~-~lp~~r~~~~~~~~-~~-~Iyv~GG~~~~~~~~~v~~yD~~t---~~W~~i~~~p~~R~~~~ 446 (592)
..+++||+.+.+...+. .+..| ..++.. ++ .|||.-. ....+++|++.+ .+++....++. ..
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~~p---~gia~~~dg~~lyv~d~-----~~~~I~~~~~~~~~~~~~~~~~~~~g----P~ 232 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELHVP---GGAEVSADSSFVLVAEF-----LSHQIVKYWLEGPKKGTAEVLVKIPN----PG 232 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEESCC---CEEEECTTSSEEEEEEG-----GGTEEEEEESSSTTTTCEEEEEECSS----EE
T ss_pred ceEEEEeCCCCEEEEeccCCccC---cceEECCCCCEEEEEeC-----CCCeEEEEECCCCcCCccceEEeCCC----CC
Confidence 57999999888765432 11111 223333 44 4888742 135789999875 33443332222 22
Q ss_pred EEEE--CCEEEEEeccCCC-----CCCCeeEEEeCCCCeEEEeccCC-C-CCceeEEEEECCEEEEEecCCCCCCCCeEE
Q 007704 447 AAEL--NGVLYATGGYDGN-----EYMNSAERFDPREHYWTKIANMN-R-RRGCHSLAVLNGKLYALGGFDGSAMVPSIE 517 (592)
Q Consensus 447 a~~~--~g~IYV~GG~~~~-----~~~~~v~~yD~~t~~W~~i~~~p-~-~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~ 517 (592)
...+ +|.|||....... .....+.+||+....-..+.... . .....+++..++.|||.+.. .+.+.
T Consensus 233 gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~-----~~~i~ 307 (322)
T 2fp8_A 233 NIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLF-----HGSVG 307 (322)
T ss_dssp EEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSS-----CSEEE
T ss_pred CeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecC-----CCceE
Confidence 2333 5679887643111 01246899999755544443211 1 12223344458999987532 34688
Q ss_pred EEeCCC
Q 007704 518 VYDPRL 523 (592)
Q Consensus 518 ~yD~~t 523 (592)
+|++..
T Consensus 308 ~~~~~~ 313 (322)
T 2fp8_A 308 ILVYDK 313 (322)
T ss_dssp EEEC--
T ss_pred EEeccc
Confidence 888753
No 288
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=65.04 E-value=1.1e+02 Score=30.00 Aligned_cols=169 Identities=14% Similarity=0.059 Sum_probs=93.1
Q ss_pred ceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCC----CeEEEc-c-cccCcccc
Q 007704 373 NTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDI----GKWIRT-R-SMLQKRFA 444 (592)
Q Consensus 373 ~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t----~~W~~i-~-~~p~~R~~ 444 (592)
+.+..+|+.+.....+-+ .-..-++.+.. +++||+.... ...++++|+.+ .....+ + .+..+
T Consensus 10 ~~I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~-----~~~I~~~~~~g~~~~~~~~~~~~~~~~~p--- 79 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQAP--- 79 (316)
T ss_dssp SSEEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEECSSCSCC---
T ss_pred CeEEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEECC-----CCcEEEEECCCCCCCcccEEEEeCCCCCc---
Confidence 458888888876655421 11222344443 5789998642 35788899876 222222 1 12222
Q ss_pred eEEEE--ECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEec--cCCCCCceeEEEEE--CCEEEEEecCCCCCCCCeEEE
Q 007704 445 LAAAE--LNGVLYATGGYDGNEYMNSAERFDPREHYWTKIA--NMNRRRGCHSLAVL--NGKLYALGGFDGSAMVPSIEV 518 (592)
Q Consensus 445 ~~a~~--~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~--~~p~~R~~~s~v~~--~~~Lyv~GG~~~~~~~~~v~~ 518 (592)
..+++ .++.||+.-.. ...+.++|+....-..+. .+..|+ .+++- ++.||+..-. ....|++
T Consensus 80 ~glavd~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~~~~P~---~iavdp~~g~ly~~d~~----~~~~I~~ 147 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWG----TPAKIKK 147 (316)
T ss_dssp CEEEEETTTTEEEEEETT-----TTEEEEEETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEECS----SSCEEEE
T ss_pred CEEEEeecCCeEEEEECC-----CCEEEEEeCCCCceEEEEECCCCCcc---eEEeCCCCCEEEEEccC----CCCeEEE
Confidence 23333 37899997542 357899998865444332 222332 34443 7889988531 1257999
Q ss_pred EeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecccCCCccccEEEEEcCC
Q 007704 519 YDPRLGSWMSGEPMKLSRGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 519 yD~~t~~W~~v~~lp~~R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+++....-+.+..-. -....++++- +++||+.-... +.|+++|+.
T Consensus 148 ~~~dG~~~~~~~~~~-~~~P~gla~d~~~~~lY~~D~~~------~~I~~~d~d 194 (316)
T 1ijq_A 148 GGLNGVDIYSLVTEN-IQWPNGITLDLLSGRLYWVDSKL------HSISSIDVN 194 (316)
T ss_dssp EETTSCCEEEEECSS-CSCEEEEEEETTTTEEEEEETTT------TEEEEEETT
T ss_pred EcCCCCCeEEEEECC-CCCceEEEEeccCCEEEEEECCC------CeEEEEecC
Confidence 998655444332111 1122344444 57899875432 568888876
No 289
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=63.97 E-value=1.2e+02 Score=30.20 Aligned_cols=73 Identities=14% Similarity=0.178 Sum_probs=43.7
Q ss_pred CCEEEEEecCCC-----CCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-C-CEEEEEecccCCCccccEEEEEcCC
Q 007704 498 NGKLYALGGFDG-----SAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-K-EAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 498 ~~~Lyv~GG~~~-----~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~-~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
++++|+....++ ....+.++++|+.+.+ .+..++.+. ..+++.. + ..+|+.++ ++|.+||.
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~~~-p~~ia~spdg~~l~v~n~--------~~v~v~D~- 332 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPGRD-ALSMTIDQQRNLMLTLDG--------GNVNVYDI- 332 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEECTT-CCEEEEETTTTEEEEECS--------SCEEEEEC-
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEecCC-eeEEEECCCCCEEEEeCC--------CeEEEEEC-
Confidence 588998754221 1134689999998875 333344444 5555555 3 45665442 56999998
Q ss_pred CcE--EEcccc-CCC
Q 007704 571 QGW--EEINSR-AIG 582 (592)
Q Consensus 571 ~~W--~~v~~~-p~~ 582 (592)
.++ +.+... +.+
T Consensus 333 ~t~~l~~~~~i~~~G 347 (361)
T 2oiz_A 333 SQPEPKLLRTIEGAA 347 (361)
T ss_dssp SSSSCEEEEEETTSC
T ss_pred CCCcceeeEEeccCC
Confidence 445 666653 444
No 290
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=62.69 E-value=2 Score=44.10 Aligned_cols=140 Identities=12% Similarity=0.148 Sum_probs=55.4
Q ss_pred EECCEEEEEecCCCCcccceEEEEeCCCCe--EEEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCC--
Q 007704 402 TIDNKIFAIGGGNGLECFSDVEMLDLDIGK--WIRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREH-- 477 (592)
Q Consensus 402 ~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~--W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~-- 477 (592)
+.++.||+.+ .+ ..++.+|..+++ |+.-. . ......+..++.+|+.++.+ ..++.+|.+++
T Consensus 7 v~~~~v~~gs-~d-----g~v~a~d~~tG~~~W~~~~--~--~~~s~p~~~~g~~~v~~s~d-----g~l~a~d~~tG~~ 71 (369)
T 2hz6_A 7 LPETLLFVST-LD-----GSLHAVSKRTGSIKWTLKE--D--PVLQVPTHVEEPAFLPDPND-----GSLYTLGSKNNEG 71 (369)
T ss_dssp -CTTEEEEEE-TT-----SEEEEEETTTCCEEEEEEC--C--CSCCCC-----CCEEECTTT-----CCEEEC-----CC
T ss_pred eeCCEEEEEc-CC-----CEEEEEECCCCCEEEEecC--C--CceecceEcCCCEEEEeCCC-----CEEEEEECCCCce
Confidence 3456666653 22 368899988764 76532 1 11122234567788876544 35888998654
Q ss_pred eEEEeccCCCCCceeEEEE-ECCEEEEEecCCCCCCCCeEEEEeCCCC--eEEEcCCCCCCCcceEEEEECCEEEEEecc
Q 007704 478 YWTKIANMNRRRGCHSLAV-LNGKLYALGGFDGSAMVPSIEVYDPRLG--SWMSGEPMKLSRGYLGAAVVKEAIYVIGGV 554 (592)
Q Consensus 478 ~W~~i~~~p~~R~~~s~v~-~~~~Lyv~GG~~~~~~~~~v~~yD~~t~--~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~ 554 (592)
.|..-...+... ..+.+. .++.||+ |+.+ ..++.+|+.++ .|+.-..-. .+ .+..++.+| +|+.
T Consensus 72 ~w~~~~~~~~~~-~~sp~~~~~~~v~~-g~~d-----g~v~a~D~~tG~~~w~~~~~~~-~~----~~p~~~~v~-~~~~ 138 (369)
T 2hz6_A 72 LTKLPFTIPELV-QASPCRSSDGILYM-GKKQ-----DIWYVIDLLTGEKQQTLSSAFA-DS----LSPSTSLLY-LGRT 138 (369)
T ss_dssp SEECSCCHHHHH-TTCSCC-----CCC-CEEE-----EEEEEECCC---------------------------EE-EEEE
T ss_pred eeeeeccCcccc-ccCceEecCCEEEE-EeCC-----CEEEEEECCCCcEEEEecCCCc-cc----ccccCCEEE-EEec
Confidence 465321111000 001111 3455543 3322 35888888765 365422110 01 111334444 4543
Q ss_pred cCCCccccEEEEEcCC---CcEEE
Q 007704 555 KNGSEIVDTVERFKEG---QGWEE 575 (592)
Q Consensus 555 ~~~~~~~~~v~~Yd~~---~~W~~ 575 (592)
+ ..|..||+. ..|+.
T Consensus 139 d------g~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 139 E------YTITMYDTKTRELRWNA 156 (369)
T ss_dssp E------EEEECCCSSSSSCCCEE
T ss_pred C------CEEEEEECCCCCEEEeE
Confidence 3 458888875 45875
No 291
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=62.34 E-value=17 Score=25.10 Aligned_cols=34 Identities=12% Similarity=0.176 Sum_probs=25.6
Q ss_pred cccHHHHHHHHHHHHHHHHhhhhHhHHHHHHHHH
Q 007704 258 SSRCQSIINELIKEVAELKAFKTEQTLKMKELEQ 291 (592)
Q Consensus 258 ~~~~~~~i~~l~~e~~~l~~~~~~~~~~~~~l~~ 291 (592)
..+++|.|..+..|+++.++++.+++++...|+.
T Consensus 4 k~~l~qkI~kVdrEI~Kte~kI~~lqkKlkeLee 37 (42)
T 2l5g_B 4 KEELIQNMDRVDREITMVEQQISKLKKKQQQLEE 37 (42)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999998888877776666555443
No 292
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=61.94 E-value=1e+02 Score=28.78 Aligned_cols=149 Identities=9% Similarity=-0.023 Sum_probs=83.0
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
++.||+.-.. .+.+.++|+....-..+......+ -..++.. ++.||+..... ....++++++....-+.
T Consensus 90 ~~~lyv~d~~-----~~~I~~~~~~g~~~~~~~~~~~~~-P~~i~vd~~~g~lyv~~~~~---~~~~I~~~~~dg~~~~~ 160 (267)
T 1npe_A 90 GRTIFWTDSQ-----LDRIEVAKMDGTQRRVLFDTGLVN-PRGIVTDPVRGNLYWTDWNR---DNPKIETSHMDGTNRRI 160 (267)
T ss_dssp TTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCSS-EEEEEEETTTTEEEEEECCS---SSCEEEEEETTSCCCEE
T ss_pred CCeEEEEECC-----CCEEEEEEcCCCCEEEEEECCCCC-ccEEEEeeCCCEEEEEECCC---CCcEEEEEecCCCCcEE
Confidence 5789987543 257888888754333321111111 1233333 68899986321 13578888886543333
Q ss_pred cccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEe-ccCCCCCceeEEEEECCEEEEEecCCCCC
Q 007704 435 TRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKI-ANMNRRRGCHSLAVLNGKLYALGGFDGSA 511 (592)
Q Consensus 435 i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i-~~~p~~R~~~s~v~~~~~Lyv~GG~~~~~ 511 (592)
+..... ..-..+++- ++.||+.-.. .+.+++||+....-..+ .....| .+++.-++.||+....
T Consensus 161 ~~~~~~-~~P~gia~d~~~~~lyv~d~~-----~~~I~~~~~~g~~~~~~~~~~~~P---~gi~~d~~~lyva~~~---- 227 (267)
T 1npe_A 161 LAQDNL-GLPNGLTFDAFSSQLCWVDAG-----THRAECLNPAQPGRRKVLEGLQYP---FAVTSYGKNLYYTDWK---- 227 (267)
T ss_dssp EECTTC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTEEEEEEEEECCCSE---EEEEEETTEEEEEETT----
T ss_pred EEECCC-CCCcEEEEcCCCCEEEEEECC-----CCEEEEEecCCCceEEEecCCCCc---eEEEEeCCEEEEEECC----
Confidence 321111 112233333 5789997642 36799999986543332 222222 3455568999997542
Q ss_pred CCCeEEEEeCCCCeEEE
Q 007704 512 MVPSIEVYDPRLGSWMS 528 (592)
Q Consensus 512 ~~~~v~~yD~~t~~W~~ 528 (592)
.+.+.++|+.+.+...
T Consensus 228 -~~~v~~~d~~~g~~~~ 243 (267)
T 1npe_A 228 -TNSVIAMDLAISKEMD 243 (267)
T ss_dssp -TTEEEEEETTTTEEEE
T ss_pred -CCeEEEEeCCCCCceE
Confidence 3579999998876543
No 293
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=60.22 E-value=1.4e+02 Score=29.75 Aligned_cols=151 Identities=10% Similarity=0.119 Sum_probs=73.5
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCC--eEEECCC----CCCCCcceEEEEE--CC-EEEEEecCCCCcccceEEEEeC
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPAND--EWTSRPS----LNGTKGSLAGATI--DN-KIFAIGGGNGLECFSDVEMLDL 427 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~--~W~~l~~----lp~~r~~~~~~~~--~~-~Iyv~GG~~~~~~~~~v~~yD~ 427 (592)
++++++.| .+ ..+..||..+. .+..+.. +........++.+ ++ .+++.|+.+ ..+.+||.
T Consensus 188 ~~~~l~s~-~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----g~i~iwd~ 256 (447)
T 3dw8_B 188 DYETYLSA-DD-----LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSK-----GTIRLCDM 256 (447)
T ss_dssp TSSEEEEE-CS-----SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETT-----SCEEEEET
T ss_pred CCCEEEEe-CC-----CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCC-----CeEEEEEC
Confidence 55666665 33 46788888732 2222211 1111222233333 44 788888765 36888998
Q ss_pred CCCeE-----EEcccccCc--c-------cceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCC-CeE-EEeccCCCCC
Q 007704 428 DIGKW-----IRTRSMLQK--R-------FALAAAEL--NGVLYATGGYDGNEYMNSAERFDPRE-HYW-TKIANMNRRR 489 (592)
Q Consensus 428 ~t~~W-----~~i~~~p~~--R-------~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t-~~W-~~i~~~p~~R 489 (592)
.+.+. ..+.....+ + .....+.+ ++.+++.|+. ..+.+||+.+ ..- ..+......+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~------~~v~iwd~~~~~~~~~~~~~~~~~~ 330 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY------LSVKVWDLNMENRPVETYQVHEYLR 330 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES------SEEEEEETTCCSSCSCCEESCGGGT
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC------CeEEEEeCCCCccccceeecccccc
Confidence 87653 222111000 0 01122222 5566666653 4688899875 321 1111000000
Q ss_pred c-------------eeEEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCCeEEEc
Q 007704 490 G-------------CHSLAVL-NGKLYALGGFDGSAMVPSIEVYDPRLGSWMSG 529 (592)
Q Consensus 490 ~-------------~~s~v~~-~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v 529 (592)
. ...++.. ++..++.|+.++ .+.+||..+..-..+
T Consensus 331 ~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg-----~v~iwd~~~~~~~~~ 379 (447)
T 3dw8_B 331 SKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNN-----FFRMFDRNTKRDITL 379 (447)
T ss_dssp TTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTT-----EEEEEETTTCCEEEE
T ss_pred ccccccccccccccceEEEECCCCCEEEEeccCC-----EEEEEEcCCCcceee
Confidence 0 0012222 566667787653 688899988766543
No 294
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=59.79 E-value=22 Score=23.50 Aligned_cols=32 Identities=19% Similarity=0.233 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhhhhHhHHHHHHHHHHHHHH
Q 007704 265 INELIKEVAELKAFKTEQTLKMKELEQKLVDA 296 (592)
Q Consensus 265 i~~l~~e~~~l~~~~~~~~~~~~~l~~~~~~~ 296 (592)
.++|..+++++......+..+...|++.+.++
T Consensus 3 MnQLE~kVEeLl~~~~~Le~EV~RL~~ll~~~ 34 (36)
T 1kd8_A 3 VKQLEAEVEEIESEVWHLENEVARLEKENAEC 34 (36)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHHHHhccc
Confidence 47889999999999999888888888776654
No 295
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=58.60 E-value=84 Score=32.59 Aligned_cols=144 Identities=14% Similarity=0.029 Sum_probs=77.0
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCE-EEEEecCCCCcccceEEEEeCCCCeEE--
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNK-IFAIGGGNGLECFSDVEMLDLDIGKWI-- 433 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~-Iyv~GG~~~~~~~~~v~~yD~~t~~W~-- 433 (592)
++.||+.--. +.+.++|+.++....+.. ...+..+-++..+++ ||+.....+ .....+..++... .|.
T Consensus 149 ~g~Lyv~d~~------~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~-~~~~~v~~~~~~g-~~~~~ 219 (430)
T 3tc9_A 149 HNHLYLVGEQ------HPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNN-NDRPNNYILTRES-GFKVI 219 (430)
T ss_dssp EEEEEEEEBT------EEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSC-TTSEEEEEEEGGG-TSCSE
T ss_pred CCeEEEEeCC------CcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCC-cccceEEEEeCCC-ceeee
Confidence 4778887432 679999999988877643 111222222222444 999864332 1223456666543 232
Q ss_pred -EcccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE-CC-EEEEEecCC
Q 007704 434 -RTRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-NG-KLYALGGFD 508 (592)
Q Consensus 434 -~i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-~~-~Lyv~GG~~ 508 (592)
.++.+. .-+.+++. ++.||+.--. ...+++||+.+..-..+...+....-..++.. ++ .||+..-.
T Consensus 220 ~~l~~~~---~p~giavdp~~g~lyv~d~~-----~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~- 290 (430)
T 3tc9_A 220 TELTKGQ---NCNGAETHPINGELYFNSWN-----AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN- 290 (430)
T ss_dssp EEEEECS---SCCCEEECTTTCCEEEEETT-----TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT-
T ss_pred eeeccCC---CceEEEEeCCCCEEEEEECC-----CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC-
Confidence 222222 22334443 6788887532 25799999998765444333221111223333 44 48988532
Q ss_pred CCCCCCeEEEEeCC
Q 007704 509 GSAMVPSIEVYDPR 522 (592)
Q Consensus 509 ~~~~~~~v~~yD~~ 522 (592)
.+.|++|+..
T Consensus 291 ----~~~I~~~~~d 300 (430)
T 3tc9_A 291 ----QHYILRSDYD 300 (430)
T ss_dssp ----TTEEEEEEEE
T ss_pred ----CCEEEEEeCC
Confidence 3467776654
No 296
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=57.03 E-value=2.4e+02 Score=31.40 Aligned_cols=98 Identities=15% Similarity=0.089 Sum_probs=55.1
Q ss_pred cceEEEEeCCCC--eE--EEcccccCcccceEEE-EECCEEEEEeccCCCCCCCeeEEEeCCC-CeEEE-eccCCCCCce
Q 007704 419 FSDVEMLDLDIG--KW--IRTRSMLQKRFALAAA-ELNGVLYATGGYDGNEYMNSAERFDPRE-HYWTK-IANMNRRRGC 491 (592)
Q Consensus 419 ~~~v~~yD~~t~--~W--~~i~~~p~~R~~~~a~-~~~g~IYV~GG~~~~~~~~~v~~yD~~t-~~W~~-i~~~p~~R~~ 491 (592)
.++++++|+.+. .+ +.+.+-.. ...+... ..++.||+..-.+ ......++++|+.+ ..|+. +-+.......
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~~~-~~~~s~~~~~g~~l~~~t~~~-~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l 371 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPREK-GVRYDVQMHGTSHLVILTNEG-GAVNHKLLIAPRGQPSDWSHVLVDHSEDVFM 371 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCCCT-TCCEEEEEETTTEEEEEECTT-TCTTCEEEEEETTSTTCCCCEEECCCSSEEE
T ss_pred CceEEEEECCCCCCCceeEEeecCCC-CceEEEeeeeCCEEEEEeCCC-CCCCcEEEEEcCCCcccceeeEECCCCCcEE
Confidence 578999999875 46 55532211 1112222 2377888886543 12235789999886 67876 4222222122
Q ss_pred eEEEEECCEEEEEecCCCCCCCCeEEEEeC
Q 007704 492 HSLAVLNGKLYALGGFDGSAMVPSIEVYDP 521 (592)
Q Consensus 492 ~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~ 521 (592)
......++.|++....++ ...++++|+
T Consensus 372 ~~~~~~~~~lv~~~~~~g---~~~l~~~dl 398 (751)
T 2xe4_A 372 ESIAVRSNYLVVAGRRAG---LTRIWTMMA 398 (751)
T ss_dssp EEEEECSSEEEEEEEETT---EEEEEEEEC
T ss_pred EEEEEECCEEEEEEEeCC---EEEEEEEec
Confidence 223334777777765433 356888886
No 297
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=56.68 E-value=35 Score=37.82 Aligned_cols=146 Identities=16% Similarity=0.131 Sum_probs=77.1
Q ss_pred ceEEEEECCEEEEEeeCCCCCCcceEEEEECCCC-eE--EEC----CCCCCCCcceEEEE-ECCEEEEEecCCCCcccce
Q 007704 350 YASAAMLNGELYIFGGGDGNSWHNTVESYSPAND-EW--TSR----PSLNGTKGSLAGAT-IDNKIFAIGGGNGLECFSD 421 (592)
Q Consensus 350 ~~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~-~W--~~l----~~lp~~r~~~~~~~-~~~~Iyv~GG~~~~~~~~~ 421 (592)
.-+++...+++|+|-| +.+|+++.... .. ..+ +.+|. ....+... .++++|+|-| +.
T Consensus 446 fDAit~~rg~~yfFKg-------~~yWr~~~~~~~~~~P~~Is~~wp~LP~-~IDAA~~~~~~~k~yFFkG-------~~ 510 (631)
T 1ck7_A 446 FDGIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPE-KIDAVYEAPQEEKAVFFAG-------NE 510 (631)
T ss_dssp CSEEEECSSSEEEECS-------SEEEEESCTTSCCEEEEEGGGTCTTSCS-SCSBCCEETTTTEEEEEET-------TE
T ss_pred cceeEecCCcEEEEcC-------CEEEEEcCCCCCCCCceeccccCCCCCc-cceEEEEECCCCEEEEEec-------CE
Confidence 3455566899999988 56788876542 11 111 22332 12222222 2678999977 57
Q ss_pred EEEEeCCCC--eE-EEcccccCcc--cceEEEE---ECCEEEEEeccCCCCCCCeeEEEeCCCCeEE-----Eec-cC-C
Q 007704 422 VEMLDLDIG--KW-IRTRSMLQKR--FALAAAE---LNGVLYATGGYDGNEYMNSAERFDPREHYWT-----KIA-NM-N 486 (592)
Q Consensus 422 v~~yD~~t~--~W-~~i~~~p~~R--~~~~a~~---~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~-----~i~-~~-p 486 (592)
+|+|+..+. -+ +.+..+..+. ..--++. .++++|+|-| +..|+||..++.=. .+. .. .
T Consensus 511 yWry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG-------~~ywryd~~~~~vd~gYPk~i~~~w~G 583 (631)
T 1ck7_A 511 YWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNA 583 (631)
T ss_dssp EEEEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEET-------TEEEEEETTTTEECTTCCEETTTSCSS
T ss_pred EEEECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEEC-------CEEEEEcCCcccccCCCCcchHhhcCC
Confidence 899985310 00 1222211111 1112222 3689999988 57899997765321 111 00 1
Q ss_pred CCCceeEEEEEC--CEEEEEecCCCCCCCCeEEEEeCCCC
Q 007704 487 RRRGCHSLAVLN--GKLYALGGFDGSAMVPSIEVYDPRLG 524 (592)
Q Consensus 487 ~~R~~~s~v~~~--~~Lyv~GG~~~~~~~~~v~~yD~~t~ 524 (592)
.+....++...+ +++|+|-| +..|+||..+.
T Consensus 584 ~p~~iDAAf~~~~~g~~YFFkG-------~~Ywr~d~~~~ 616 (631)
T 1ck7_A 584 IPDNLDAVVDLQGGGHSYFFKG-------AYYLKLENQSL 616 (631)
T ss_dssp CCTTCCEEECCTTSCBCEEEET-------TEEECCBTTBT
T ss_pred CCCCCcEeEEEcCCCeEEEEEC-------CEEEEEeCccc
Confidence 122223444443 88999977 35777776543
No 298
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=56.34 E-value=3e+02 Score=32.70 Aligned_cols=168 Identities=11% Similarity=0.073 Sum_probs=93.2
Q ss_pred cceEEEEECCCCeEEECCC--CCCCCcceEEEEE--C---CEEEEEecCC-----CCcccceEEEEeCCCCeEEEccccc
Q 007704 372 HNTVESYSPANDEWTSRPS--LNGTKGSLAGATI--D---NKIFAIGGGN-----GLECFSDVEMLDLDIGKWIRTRSML 439 (592)
Q Consensus 372 ~~~v~~yd~~t~~W~~l~~--lp~~r~~~~~~~~--~---~~Iyv~GG~~-----~~~~~~~v~~yD~~t~~W~~i~~~p 439 (592)
...+..+|+.+ |..+.. +...-...+++.+ . ...+++|-.. .......+.+|+...++.+.+...+
T Consensus 806 ~s~i~lidp~t--~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~ 883 (1158)
T 3ei3_A 806 VHNLLIIDQHT--FEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKE 883 (1158)
T ss_dssp EEEEEEEETTT--CCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEE
T ss_pred eEEEEEEeCCC--CeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEE
Confidence 34566778765 433322 2222222233332 2 3567777521 1113346888888777777776555
Q ss_pred CcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEec--cCCCCCceeEEEEECCEEEEEecCCCCCCCCeEE
Q 007704 440 QKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIA--NMNRRRGCHSLAVLNGKLYALGGFDGSAMVPSIE 517 (592)
Q Consensus 440 ~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~--~~p~~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~ 517 (592)
..-.-.+.+.++|++.+.-| +.+.+||......-+.. ..+. .....+.+.++.|++ |-... .-.+.
T Consensus 884 v~g~v~al~~~~g~Lla~ig-------~~l~vy~l~~~~~L~~~~~~~~~-i~~~~l~~~~~~I~v-gD~~~---Sv~~~ 951 (1158)
T 3ei3_A 884 VKGAVYSMVEFNGKLLASIN-------STVRLYEWTTEKELRTECNHYNN-IMALYLKTKGDFILV-GDLMR---SVLLL 951 (1158)
T ss_dssp ESSCEEEEEEETTEEEEEET-------TEEEEEEECTTSCEEEEEEECCC-SCEEEEEEETTEEEE-EESSB---CEEEE
T ss_pred cCCcCEEEeeeCCEEEEEcC-------CEEEEEECCCCceEEEEeecccc-EEEEEEeccCCEEEE-EEhhh---eEEEE
Confidence 54456667778998776555 57888887765422211 0111 011123345776655 33211 22456
Q ss_pred EEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecc
Q 007704 518 VYDPRLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGV 554 (592)
Q Consensus 518 ~yD~~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~ 554 (592)
.|+...++...++.=..+|...++..+++. .++|+-
T Consensus 952 ~y~~~~~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD 987 (1158)
T 3ei3_A 952 AYKPMEGNFEEIARDFNPNWMSAVEILDDD-NFLGAE 987 (1158)
T ss_dssp EEETTTTEEEEEEECCSCBCEEEEEEEETT-EEEEEE
T ss_pred EEEcCCCeEEEEEeecccccEEEEEEEccC-cEEEEc
Confidence 799999999998877778887777776443 334443
No 299
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=56.20 E-value=1.6e+02 Score=29.22 Aligned_cols=171 Identities=13% Similarity=0.058 Sum_probs=96.2
Q ss_pred ceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEEcc--cccCcccceEEE
Q 007704 373 NTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTR--SMLQKRFALAAA 448 (592)
Q Consensus 373 ~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~--~~p~~R~~~~a~ 448 (592)
+.+..+++.......+... ...-.+++.. ++.||+.-- ....++++++.....+.+. .+..+ .+.+.-
T Consensus 53 ~~I~~i~~~g~~~~~~~~~--~~~~~~l~~d~~~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~~~~~p-~glavd 124 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDV-----TLDRILRANLNGSNVEEVVSTGLESP-GGLAVD 124 (349)
T ss_dssp SCEEEECTTSCCEEEEECS--CSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCSCEEEECSSCSCC-CEEEEE
T ss_pred cceEEEeCCCCeeEEeecC--CCceEEEEEeccccEEEEEec-----cCCceEEEecCCCCceEEEeCCCCCc-cEEEEe
Confidence 4578888888777655321 1122333332 688998853 2357889999876654432 22222 122222
Q ss_pred EECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEec--cCCCCCceeEEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCC
Q 007704 449 ELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIA--NMNRRRGCHSLAVL--NGKLYALGGFDGSAMVPSIEVYDPRLG 524 (592)
Q Consensus 449 ~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~--~~p~~R~~~s~v~~--~~~Lyv~GG~~~~~~~~~v~~yD~~t~ 524 (592)
..++.||+.-.. .+.++++++....-..+. .+..|+ .+++- ++.||+..-.. ...|+++++...
T Consensus 125 ~~~g~ly~~d~~-----~~~I~~~~~dG~~~~~l~~~~l~~P~---~iavdp~~g~ly~td~~~----~~~I~r~~~dG~ 192 (349)
T 3v64_C 125 WVHDKLYWTDSG-----TSRIEVANLDGAHRKVLLWQSLEKPR---AIALHPMEGTIYWTDWGN----TPRIEASSMDGS 192 (349)
T ss_dssp TTTTEEEEEETT-----TTEEEEEETTSCSCEEEECTTCSCEE---EEEEETTTTEEEEEECSS----SCEEEEEETTSC
T ss_pred cCCCeEEEEcCC-----CCeEEEEcCCCCceEEEEeCCCCCcc---eEEEecCcCeEEEeccCC----CCEEEEEeCCCC
Confidence 237899997543 257899998765543332 222332 34444 68899885321 367999998765
Q ss_pred eEEEcCCCCCCCcceEEEEE--CCEEEEEecccCCCccccEEEEEcCC
Q 007704 525 SWMSGEPMKLSRGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 525 ~W~~v~~lp~~R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
.-+.+..-. -....++++- ++.||+.-... +.|+++|+.
T Consensus 193 ~~~~~~~~~-~~~PnGla~d~~~~~lY~aD~~~------~~I~~~~~d 233 (349)
T 3v64_C 193 GRRIIADTH-LFWPNGLTIDYAGRRMYWVDAKH------HVIERANLD 233 (349)
T ss_dssp SCEESCCSS-CSCEEEEEEETTTTEEEEEETTT------TEEEEEETT
T ss_pred CcEEEEECC-CCCcceEEEeCCCCEEEEEECCC------CEEEEEeCC
Confidence 444442111 1112344443 67899875422 568888876
No 300
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=54.40 E-value=23 Score=22.96 Aligned_cols=29 Identities=10% Similarity=0.094 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHhhhhHhHHHHHHHHHHH
Q 007704 265 INELIKEVAELKAFKTEQTLKMKELEQKL 293 (592)
Q Consensus 265 i~~l~~e~~~l~~~~~~~~~~~~~l~~~~ 293 (592)
.++|..+++++..+...+..++..+++.+
T Consensus 2 MnQLEdKVEell~~~~~le~EV~Rl~~ll 30 (33)
T 2wq1_A 2 MKQLEDKIEENTSKIYHNTNEIARNTKLV 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 46888899999888888888887776543
No 301
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=52.38 E-value=76 Score=32.95 Aligned_cols=142 Identities=11% Similarity=0.024 Sum_probs=77.0
Q ss_pred CCEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEE---CCEEEEEeccCCCCCCCeeEEEeCCCCeE-
Q 007704 404 DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAEL---NGVLYATGGYDGNEYMNSAERFDPREHYW- 479 (592)
Q Consensus 404 ~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~---~g~IYV~GG~~~~~~~~~v~~yD~~t~~W- 479 (592)
++.||+.--. ..+.++|+.+++.+.+.. .-.......+ ++.||+.....+ .....+..++... .|
T Consensus 149 ~g~Lyv~d~~------~~I~~id~~~~~v~~~~~---~~~~P~~ia~d~~G~~lyvad~~~~-~~~~~v~~~~~~g-~~~ 217 (430)
T 3tc9_A 149 HNHLYLVGEQ------HPTRLIDFEKEYVSTVYS---GLSKVRTICWTHEADSMIITNDQNN-NDRPNNYILTRES-GFK 217 (430)
T ss_dssp EEEEEEEEBT------EEEEEEETTTTEEEEEEC---CCSCEEEEEECTTSSEEEEEECCSC-TTSEEEEEEEGGG-TSC
T ss_pred CCeEEEEeCC------CcEEEEECCCCEEEEEec---CCCCcceEEEeCCCCEEEEEeCCCC-cccceEEEEeCCC-cee
Confidence 4789988532 688999999988876643 1122222222 345999864332 2223456666543 23
Q ss_pred --EEeccCCCCCceeEEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CC-EEEEEec
Q 007704 480 --TKIANMNRRRGCHSLAVL--NGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KE-AIYVIGG 553 (592)
Q Consensus 480 --~~i~~~p~~R~~~s~v~~--~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~-~Iyv~GG 553 (592)
..++....+ +.+++. ++.||+..-. ...|++||+.......+...+.......+++- ++ .||+.--
T Consensus 218 ~~~~l~~~~~p---~giavdp~~g~lyv~d~~-----~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 218 VITELTKGQNC---NGAETHPINGELYFNSWN-----AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp SEEEEEECSSC---CCEEECTTTCCEEEEETT-----TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred eeeeeccCCCc---eEEEEeCCCCEEEEEECC-----CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC
Confidence 233333333 334443 6788887532 24799999987765443322221112233333 34 4888754
Q ss_pred ccCCCccccEEEEEcCC
Q 007704 554 VKNGSEIVDTVERFKEG 570 (592)
Q Consensus 554 ~~~~~~~~~~v~~Yd~~ 570 (592)
.+ +.|++|+..
T Consensus 290 ~~------~~I~~~~~d 300 (430)
T 3tc9_A 290 NQ------HYILRSDYD 300 (430)
T ss_dssp TT------TEEEEEEEE
T ss_pred CC------CEEEEEeCC
Confidence 32 557776654
No 302
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=51.21 E-value=3.1e+02 Score=30.98 Aligned_cols=175 Identities=14% Similarity=0.075 Sum_probs=95.2
Q ss_pred ceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCC----eEEE-cc-cccCcccc
Q 007704 373 NTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIG----KWIR-TR-SMLQKRFA 444 (592)
Q Consensus 373 ~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~----~W~~-i~-~~p~~R~~ 444 (592)
..+..++.....+..+... .+...+++.. +++||+.-.. ...++++++... .... +. .+..+ .+
T Consensus 404 ~~Ir~i~l~~~~~~~l~~~--~~~~~gl~~d~~~~~lY~sD~~-----~~~I~~~~l~g~~~~~~~~~vi~~~l~~P-~G 475 (791)
T 3m0c_C 404 HEVRKMTLDRSEYTSLIPN--LRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQAP-DG 475 (791)
T ss_dssp SSEEEECTTSCCCEEEECS--CSSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEECSSCSCC-CE
T ss_pred cceeEeeccCCcceeeecC--CCceEEEeecccCCeeEEeecc-----ceeEEEEeccCCCCCcceeEEEecCCCCc-ce
Confidence 3466677766666554221 1222333433 6889998642 246777777642 2222 22 22222 22
Q ss_pred eEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEec--cCCCCCceeEEEEE--CCEEEEEecCCCCCCCCeEEEEe
Q 007704 445 LAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIA--NMNRRRGCHSLAVL--NGKLYALGGFDGSAMVPSIEVYD 520 (592)
Q Consensus 445 ~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~--~~p~~R~~~s~v~~--~~~Lyv~GG~~~~~~~~~v~~yD 520 (592)
.+.-..+++||+.-.. ...|+++|+....-..+. .+..|+ ++++- ++.||+..-. ....|++++
T Consensus 476 LAvD~~~~~LY~tD~~-----~~~I~v~~ldG~~~~~l~~~~l~~P~---gIaVDp~~g~LYwtD~g----~~~~I~~~~ 543 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWG----TPAKIKKGG 543 (791)
T ss_dssp EEEETTTTEEEEEETT-----TTEEEEEETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEECS----SSCEEEEEE
T ss_pred eeeeecCCcEEEEecC-----CCeEEEEeCCCCeEEEEEeCCCCCcc---eEEEecCCCCEEEecCC----CCCeEEEEe
Confidence 2222247799998542 367999999877665553 233333 34443 6899998521 125789998
Q ss_pred CCCCeEEEcC--CCCCCCcceEEEEE--CCEEEEEecccCCCccccEEEEEcCC--CcEEEc
Q 007704 521 PRLGSWMSGE--PMKLSRGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERFKEG--QGWEEI 576 (592)
Q Consensus 521 ~~t~~W~~v~--~lp~~R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd~~--~~W~~v 576 (592)
+....-+.+. .+..| .++++- +++||+.-.. .+.|+++|+. .....+
T Consensus 544 ~dG~~~~~lv~~~l~~P---~GLavD~~~~~LYwaD~~------~~~I~~~d~dG~~~~~v~ 596 (791)
T 3m0c_C 544 LNGVDIYSLVTENIQWP---NGITLDLLSGRLYWVDSK------LHSISSIDVNGGNRKTIL 596 (791)
T ss_dssp TTSCCEEEEECSSCSCE---EEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEE
T ss_pred cCCCceEEEEeCCCCCc---eEEEEecCCCeEEEEeCC------CCcEEEEecCCCceEEEe
Confidence 8765444432 22222 234433 6889997432 2568899887 445544
No 303
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=50.40 E-value=3.2e+02 Score=30.88 Aligned_cols=172 Identities=15% Similarity=0.063 Sum_probs=93.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCC----e-EEECC-CCCCCCcceEEEE--ECCEEEEEecCCCCcccceEEEEeCC
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPAND----E-WTSRP-SLNGTKGSLAGAT--IDNKIFAIGGGNGLECFSDVEMLDLD 428 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~----~-W~~l~-~lp~~r~~~~~~~--~~~~Iyv~GG~~~~~~~~~v~~yD~~ 428 (592)
++.||+.-... +.++++++... . ...+. .+..|. ++++ .+++||+.-.. ...++++++.
T Consensus 435 ~~~lY~sD~~~-----~~I~~~~l~g~~~~~~~~~vi~~~l~~P~---GLAvD~~~~~LY~tD~~-----~~~I~v~~ld 501 (791)
T 3m0c_C 435 SNRIYWSDLSQ-----RMICSTQLDRAHGVSSYDTVISRDIQAPD---GLAVDWIHSNIYWTDSV-----LGTVSVADTK 501 (791)
T ss_dssp TTEEEEEETTT-----TEEEEEEC--------CEEEECSSCSCCC---EEEEETTTTEEEEEETT-----TTEEEEEETT
T ss_pred CCeeEEeeccc-----eeEEEEeccCCCCCcceeEEEecCCCCcc---eeeeeecCCcEEEEecC-----CCeEEEEeCC
Confidence 57788875422 45777777642 2 22222 222222 3333 36799998542 3578999988
Q ss_pred CCeEEEcc--cccCcccceEEEE--ECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCEEE
Q 007704 429 IGKWIRTR--SMLQKRFALAAAE--LNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGKLY 502 (592)
Q Consensus 429 t~~W~~i~--~~p~~R~~~~a~~--~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~Ly 502 (592)
...-+.+. .+..|+ .+++ .++.||+.-- .....|+++++....-..+..... ..-.++++- +++||
T Consensus 502 G~~~~~l~~~~l~~P~---gIaVDp~~g~LYwtD~----g~~~~I~~~~~dG~~~~~lv~~~l-~~P~GLavD~~~~~LY 573 (791)
T 3m0c_C 502 GVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDW----GTPAKIKKGGLNGVDIYSLVTENI-QWPNGITLDLLSGRLY 573 (791)
T ss_dssp SSSEEEEEECTTCCEE---EEEEETTTTEEEEEEC----SSSCEEEEEETTSCCEEEEECSSC-SCEEEEEEETTTTEEE
T ss_pred CCeEEEEEeCCCCCcc---eEEEecCCCCEEEecC----CCCCeEEEEecCCCceEEEEeCCC-CCceEEEEecCCCeEE
Confidence 66554442 222222 2333 2689999751 112578999988765544432111 111223333 78999
Q ss_pred EEecCCCCCCCCeEEEEeCCCCe-EEEcCCCCCCCcceEEEEECCEEEEEecc
Q 007704 503 ALGGFDGSAMVPSIEVYDPRLGS-WMSGEPMKLSRGYLGAAVVKEAIYVIGGV 554 (592)
Q Consensus 503 v~GG~~~~~~~~~v~~yD~~t~~-W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~ 554 (592)
+.-.. ...|+++|+.... .+.+.....-...+++++.++.||+.-..
T Consensus 574 waD~~-----~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~ 621 (791)
T 3m0c_C 574 WVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII 621 (791)
T ss_dssp EEETT-----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETT
T ss_pred EEeCC-----CCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECC
Confidence 98542 4579999986543 33332211112235777788999987643
No 304
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=49.84 E-value=22 Score=23.20 Aligned_cols=30 Identities=17% Similarity=0.224 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHhhhhHhHHHHHHHHHHH
Q 007704 264 IINELIKEVAELKAFKTEQTLKMKELEQKL 293 (592)
Q Consensus 264 ~i~~l~~e~~~l~~~~~~~~~~~~~l~~~~ 293 (592)
..++|..+++++.....++..+...|++.+
T Consensus 2 RMnQLEdkVEeLl~~~~~Le~eV~RL~~ll 31 (34)
T 2hy6_A 2 KVKQLADAVEELASANYHLANAVARLAKAV 31 (34)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 357889999999988888888887777644
No 305
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=48.08 E-value=2.4e+02 Score=28.68 Aligned_cols=172 Identities=15% Similarity=0.028 Sum_probs=92.2
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCC-----eEEECCCCCCCCcceEEEE--ECCEEEEEecCCCCcccceEEEEeCCC
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPAND-----EWTSRPSLNGTKGSLAGAT--IDNKIFAIGGGNGLECFSDVEMLDLDI 429 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~-----~W~~l~~lp~~r~~~~~~~--~~~~Iyv~GG~~~~~~~~~v~~yD~~t 429 (592)
++.||+.--. ...++++++... ....+.... ..-..+++ .++.||+.-.. ...++++|+..
T Consensus 123 ~~~lywsD~~-----~~~I~~~~~~g~~~~~~~~~~~~~~~--~~p~glavD~~~~~lY~~d~~-----~~~I~~~~~~g 190 (400)
T 3p5b_L 123 SNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDI--QAPDGLAVDWIHSNIYWTDSV-----LGTVSVADTKG 190 (400)
T ss_dssp TTEEEEEETT-----TTEEEEEEC------CCCEEEECSSC--SCEEEEEEETTTTEEEEEETT-----TTEEEEECTTT
T ss_pred cCceEEEecC-----CCeEEEEEcccCCCCCcceEEEeCCC--CCcccEEEEecCCceEEEECC-----CCeEEEEeCCC
Confidence 5788887432 246788887652 122222111 11223333 37899998642 25788999887
Q ss_pred CeEEEcc--cccCcccceEEEE--ECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCEEEE
Q 007704 430 GKWIRTR--SMLQKRFALAAAE--LNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGKLYA 503 (592)
Q Consensus 430 ~~W~~i~--~~p~~R~~~~a~~--~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~Lyv 503 (592)
..-+.+. .+..|+ ..++ .++.||+.--. ....++++++....=..+..... ..-.++++- +++||+
T Consensus 191 ~~~~~l~~~~~~~P~---~iavdp~~g~ly~td~~----~~~~I~~~~~dG~~~~~~~~~~l-~~P~glavd~~~~~lY~ 262 (400)
T 3p5b_L 191 VKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIYSLVTENI-QWPNGITLDLLSGRLYW 262 (400)
T ss_dssp CSEEEEEECSSCCEE---EEEEETTTTEEEEEECS----SSCCEEEEETTSCSCEEEECSSC-SCEEEEEEETTTTEEEE
T ss_pred CceEEEEeCCCCCcc---eEEEecccCeEEEEeCC----CCCEEEEEeCCCCccEEEEECCC-CceEEEEEEeCCCEEEE
Confidence 6544432 222222 2333 26889987521 12568899887644333321111 112233333 689999
Q ss_pred EecCCCCCCCCeEEEEeCCCCeEEEc-CCCCCCCcceEEEEECCEEEEEec
Q 007704 504 LGGFDGSAMVPSIEVYDPRLGSWMSG-EPMKLSRGYLGAAVVKEAIYVIGG 553 (592)
Q Consensus 504 ~GG~~~~~~~~~v~~yD~~t~~W~~v-~~lp~~R~~~s~~v~~~~Iyv~GG 553 (592)
.... ...|+++|.....-+.+ .....-....++++.++.||+.--
T Consensus 263 aD~~-----~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~ 308 (400)
T 3p5b_L 263 VDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI 308 (400)
T ss_dssp EETT-----TTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEES
T ss_pred EECC-----CCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecC
Confidence 8542 46799999875433333 211111233577778999999763
No 306
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=47.48 E-value=27 Score=22.80 Aligned_cols=30 Identities=7% Similarity=0.162 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHhhhhHhHHHHHHHHHHH
Q 007704 264 IINELIKEVAELKAFKTEQTLKMKELEQKL 293 (592)
Q Consensus 264 ~i~~l~~e~~~l~~~~~~~~~~~~~l~~~~ 293 (592)
..++|..+++++.++...+..+...+++.+
T Consensus 2 RMnQledKvEel~~~~~~l~nEv~Rl~~lL 31 (34)
T 2r2v_A 2 KLKQVADKLEEVASKLYHNANELARVAKLL 31 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 367889999999988888888877776543
No 307
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=46.98 E-value=28 Score=22.65 Aligned_cols=29 Identities=3% Similarity=0.092 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHhhhhHhHHHHHHHHHHH
Q 007704 265 INELIKEVAELKAFKTEQTLKMKELEQKL 293 (592)
Q Consensus 265 i~~l~~e~~~l~~~~~~~~~~~~~l~~~~ 293 (592)
.++|..+++++......+..+...|++.+
T Consensus 3 MnQLEdKVEeLl~~~~~Le~EV~RLk~ll 31 (34)
T 3c3f_A 3 MXQIEXKLEXILSXLYHXENEXARIXKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 57888889999888888888777776543
No 308
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=46.28 E-value=32 Score=22.46 Aligned_cols=29 Identities=7% Similarity=0.099 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHhhhhHhHHHHHHHHHHH
Q 007704 265 INELIKEVAELKAFKTEQTLKMKELEQKL 293 (592)
Q Consensus 265 i~~l~~e~~~l~~~~~~~~~~~~~l~~~~ 293 (592)
.++|..+.+++...+.++..+...|++.+
T Consensus 3 M~QLEdKVEeLl~~n~~Le~EV~RLk~LL 31 (34)
T 1uo4_A 3 MKQIEDKGEEILSKLYHIENELARIKKLL 31 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 46888899999988888888887776643
No 309
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=46.19 E-value=2.3e+02 Score=28.03 Aligned_cols=71 Identities=18% Similarity=0.197 Sum_probs=42.3
Q ss_pred CCEEEEEeccCCC-----CCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCEEEEEecCCCCCCCCeEEEEeCCC
Q 007704 451 NGVLYATGGYDGN-----EYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGKLYALGGFDGSAMVPSIEVYDPRL 523 (592)
Q Consensus 451 ~g~IYV~GG~~~~-----~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~Lyv~GG~~~~~~~~~v~~yD~~t 523 (592)
++++|+....++. ...+.++++|+.+.+ .+..++.+. .++++.- +..||+.++ +++.+||+.+
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~~~-p~~ia~spdg~~l~v~n~-------~~v~v~D~~t 334 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPGRD-ALSMTIDQQRNLMLTLDG-------GNVNVYDISQ 334 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEECTT-CCEEEEETTTTEEEEECS-------SCEEEEECSS
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEecCC-eeEEEECCCCCEEEEeCC-------CeEEEEECCC
Confidence 5789998642211 124689999999875 333333333 4445444 445665542 6799999988
Q ss_pred CeEEEcCC
Q 007704 524 GSWMSGEP 531 (592)
Q Consensus 524 ~~W~~v~~ 531 (592)
..-+.+..
T Consensus 335 ~~l~~~~~ 342 (361)
T 2oiz_A 335 PEPKLLRT 342 (361)
T ss_dssp SSCEEEEE
T ss_pred CcceeeEE
Confidence 73244443
No 310
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=45.89 E-value=38 Score=21.97 Aligned_cols=29 Identities=7% Similarity=0.138 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHhhhhHhHHHHHHHHHHH
Q 007704 265 INELIKEVAELKAFKTEQTLKMKELEQKL 293 (592)
Q Consensus 265 i~~l~~e~~~l~~~~~~~~~~~~~l~~~~ 293 (592)
.++|..+++++..+...+..+...|++.+
T Consensus 2 MnQLEdKvEeLl~~~~~Le~EV~RLk~lL 30 (33)
T 3c3g_A 2 MKXIEXKLXEIXSKXYHXENXLARIKXLL 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 36788888888888888887777776543
No 311
>2ar1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP, unknown F; 1.60A {Leishmania major} SCOP: b.122.1.8
Probab=44.98 E-value=29 Score=31.67 Aligned_cols=40 Identities=10% Similarity=0.147 Sum_probs=33.5
Q ss_pred cchhccCCCCeEEEEecC--CCeEeeEEEeccCCCccccCCCCC
Q 007704 47 LYVRKVDPGLPLFLFNYT--DRKLHGIFEAASPGMMNINPYGWT 88 (592)
Q Consensus 47 ~~v~~i~~g~~lfl~~~~--~~~l~g~~~a~s~g~~~~~~~a~~ 88 (592)
-|.+.+++|..+|.|--. .+-+.||.|-++.+- .+|.+|.
T Consensus 54 N~mr~Mk~GD~vfFYHS~c~~pgIvGi~eVv~e~y--pD~t~fd 95 (172)
T 2ar1_A 54 NNMRAMSVGDKVLFYHSNTKEPGVAGLAEVVRLAY--DDFTALD 95 (172)
T ss_dssp HHHHHCCTTCEEEEEECSSSSCEEEEEEEEEEEEE--ECGGGGC
T ss_pred HHHHhcCCCCEEEEEecCCCCCEEEEEEEEeeecc--CCccccc
Confidence 677899999999999777 799999999988543 5777775
No 312
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=43.77 E-value=34 Score=22.33 Aligned_cols=28 Identities=18% Similarity=0.135 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHhhhhHhHHHHHHHHHH
Q 007704 265 INELIKEVAELKAFKTEQTLKMKELEQK 292 (592)
Q Consensus 265 i~~l~~e~~~l~~~~~~~~~~~~~l~~~ 292 (592)
.++|..+++++.....++..+...|+..
T Consensus 3 MnQLE~kVEeLl~~n~~Le~eV~rLk~l 30 (34)
T 2oxj_A 3 MXQLEXKVXELLXKNXHLEXEVXRLKXL 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 5788888888888888877777766653
No 313
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=43.27 E-value=2.8e+02 Score=28.13 Aligned_cols=173 Identities=13% Similarity=0.084 Sum_probs=95.1
Q ss_pred ceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCC----eEEE-cc-cccCcccc
Q 007704 373 NTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIG----KWIR-TR-SMLQKRFA 444 (592)
Q Consensus 373 ~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~----~W~~-i~-~~p~~R~~ 444 (592)
+.+..+|+....+..+.. ....-.+++.. +++||+.--. ...++.+++... .... +. .+.. -
T Consensus 92 ~~I~~i~l~~~~~~~~~~--~~~~~~~l~~d~~~~~lywsD~~-----~~~I~~~~~~g~~~~~~~~~~~~~~~~~---p 161 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQA---P 161 (400)
T ss_dssp TEEEEECTTSCSCEEEEC--SCSCEEEEEEETTTTEEEEEETT-----TTEEEEEEC------CCCEEEECSSCSC---E
T ss_pred ceeEEEccCCcceeEecc--ccCcceEEeeeeccCceEEEecC-----CCeEEEEEcccCCCCCcceEEEeCCCCC---c
Confidence 567888888776665522 12223344443 6889998532 246888888652 1222 22 1111 1
Q ss_pred eEEEE--ECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEec--cCCCCCceeEEEEE--CCEEEEEecCCCCCCCCeEEE
Q 007704 445 LAAAE--LNGVLYATGGYDGNEYMNSAERFDPREHYWTKIA--NMNRRRGCHSLAVL--NGKLYALGGFDGSAMVPSIEV 518 (592)
Q Consensus 445 ~~a~~--~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~--~~p~~R~~~s~v~~--~~~Lyv~GG~~~~~~~~~v~~ 518 (592)
..+++ .++.||+.-.. ...++++|+....-..+. .+..|+ .+++- ++.||+..-. ....|++
T Consensus 162 ~glavD~~~~~lY~~d~~-----~~~I~~~~~~g~~~~~l~~~~~~~P~---~iavdp~~g~ly~td~~----~~~~I~~ 229 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWG----TPAKIKK 229 (400)
T ss_dssp EEEEEETTTTEEEEEETT-----TTEEEEECTTTCSEEEEEECSSCCEE---EEEEETTTTEEEEEECS----SSCCEEE
T ss_pred ccEEEEecCCceEEEECC-----CCeEEEEeCCCCceEEEEeCCCCCcc---eEEEecccCeEEEEeCC----CCCEEEE
Confidence 22333 37899998643 257899999877655553 233333 34443 6889987521 1246888
Q ss_pred EeCCCCeEEEc-C-CCCCCCcceEEEEE--CCEEEEEecccCCCccccEEEEEcCC--CcEEEc
Q 007704 519 YDPRLGSWMSG-E-PMKLSRGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERFKEG--QGWEEI 576 (592)
Q Consensus 519 yD~~t~~W~~v-~-~lp~~R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd~~--~~W~~v 576 (592)
+++....-+.+ . .+..| .++++- +++||+.-.. .+.|+++|+. .....+
T Consensus 230 ~~~dG~~~~~~~~~~l~~P---~glavd~~~~~lY~aD~~------~~~I~~~d~dG~~~~~~~ 284 (400)
T 3p5b_L 230 GGLNGVDIYSLVTENIQWP---NGITLDLLSGRLYWVDSK------LHSISSIDVNGGNRKTIL 284 (400)
T ss_dssp EETTSCSCEEEECSSCSCE---EEEEEETTTTEEEEEETT------TTEEEEEETTSCCCEEEE
T ss_pred EeCCCCccEEEEECCCCce---EEEEEEeCCCEEEEEECC------CCEEEEEeCCCCccEEEE
Confidence 88865432322 1 22222 334443 6789987442 2678998877 444443
No 314
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=41.76 E-value=3.8e+02 Score=29.81 Aligned_cols=167 Identities=8% Similarity=-0.078 Sum_probs=0.0
Q ss_pred EEEEeeCCCCCCcceEEEEECCC--CeEEECCCCCCCCcceEEEEECCEEEEEecCCCCc-----ccceEEEEeCCC---
Q 007704 360 LYIFGGGDGNSWHNTVESYSPAN--DEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLE-----CFSDVEMLDLDI--- 429 (592)
Q Consensus 360 Iyv~GG~~~~~~~~~v~~yd~~t--~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~-----~~~~v~~yD~~t--- 429 (592)
++++=........+.++..|... ..|..+ ..|+........++++|+....+-.. ....+...|..+
T Consensus 256 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 332 (711)
T 4hvt_A 256 SLIFISANKDFYNYDNYILDTKYKNLKLQKI---NMPSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLK 332 (711)
T ss_dssp SEEEEEEESSSSCEEEEEEECSSSSCEEEEC---CSCTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGS
T ss_pred EEEEEEEecccCceeEEEEcCCCCCCcceEe---ecCCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccc
Q ss_pred -----CeEEEcccccCcccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEec-cCCCCCceeEEEEE---CCE
Q 007704 430 -----GKWIRTRSMLQKRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHYWTKIA-NMNRRRGCHSLAVL---NGK 500 (592)
Q Consensus 430 -----~~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~-~~p~~R~~~s~v~~---~~~ 500 (592)
..|+.+=.....+.-......++.+|+..-.++. ..+.++|+.++.|.... .............. ++.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~---~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~ 409 (711)
T 4hvt_A 333 TESDKTSLKILFTPTANEVFNFISTTKDRVFLATYDNVV---AKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEE 409 (711)
T ss_dssp CGGGCTTCEEEECCCTTEEEEEEEECSSCEEEEEEETTE---EEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSC
T ss_pred cccccccceEEECCCCCCeEEEEEEECCEEEEEEEECCE---EEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCE
Q ss_pred EEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCC
Q 007704 501 LYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLS 535 (592)
Q Consensus 501 Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~ 535 (592)
+++... .......++.||.. ..++.+...+..
T Consensus 410 ~~~~~s--s~~~P~~~~~~d~~-~~~~~l~~~~~~ 441 (711)
T 4hvt_A 410 ALITIE--NSIVPPTIYLWVKT-HELKIIRKALYS 441 (711)
T ss_dssp EEEEEE--CSSSCCEEEEECTT-SCEEEEECCSSC
T ss_pred EEEEEe--cCCCCCEEEEEeCC-CcEEEEecCCcc
No 315
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=41.71 E-value=78 Score=25.14 Aligned_cols=47 Identities=23% Similarity=0.280 Sum_probs=32.4
Q ss_pred cHHHHHHHHHHHHHHHHhhhhHhHHHHHHHHHHHHHHHHHHHhhhhc
Q 007704 260 RCQSIINELIKEVAELKAFKTEQTLKMKELEQKLVDAEAEIQRLKEH 306 (592)
Q Consensus 260 ~~~~~i~~l~~e~~~l~~~~~~~~~~~~~l~~~~~~~~rki~~l~e~ 306 (592)
..+++|.-|.-|++++..++..+..+...+.+......++...++++
T Consensus 17 ~avdtI~lLqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E 63 (81)
T 2jee_A 17 QAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQ 63 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 35667777777888887777777777666666666666666666653
No 316
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=41.64 E-value=29 Score=22.56 Aligned_cols=28 Identities=18% Similarity=0.156 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHhhhhHhHHHHHHHHHHH
Q 007704 266 NELIKEVAELKAFKTEQTLKMKELEQKL 293 (592)
Q Consensus 266 ~~l~~e~~~l~~~~~~~~~~~~~l~~~~ 293 (592)
++|..+++++...+..+..++..|++.+
T Consensus 3 ~QLE~kVEeLl~~n~~Le~EV~RLk~Ll 30 (33)
T 3m48_A 3 AQLEAKVEELLSKNWNLENEVARLKKLV 30 (33)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 5788888888888888888877776543
No 317
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=41.18 E-value=2.5e+02 Score=30.87 Aligned_cols=65 Identities=9% Similarity=0.056 Sum_probs=36.4
Q ss_pred ceEEEEECCCCeEEECCCCCC-CCc--ce--EEEEECCEEEEEecCCC----CcccceEEEEeCCCCeEEEccc
Q 007704 373 NTVESYSPANDEWTSRPSLNG-TKG--SL--AGATIDNKIFAIGGGNG----LECFSDVEMLDLDIGKWIRTRS 437 (592)
Q Consensus 373 ~~v~~yd~~t~~W~~l~~lp~-~r~--~~--~~~~~~~~Iyv~GG~~~----~~~~~~v~~yD~~t~~W~~i~~ 437 (592)
..++.||+.+++=..+-.... ... .. -..+-+++..+++..+. .....++++||..+++...+..
T Consensus 36 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~ 109 (740)
T 4a5s_A 36 NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEER 109 (740)
T ss_dssp TEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC
T ss_pred CcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEccc
Confidence 468999999887554411111 111 11 12233676656655321 1223678999999998765543
No 318
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=40.78 E-value=38 Score=33.13 Aligned_cols=97 Identities=20% Similarity=0.106 Sum_probs=44.9
Q ss_pred cceEEEEECCEEEEEeccCCCCCC-CeeEEEeCCCCeEEEeccCCCCCceeEEEEECCEEEEEecCCCCCCCCeEEEEeC
Q 007704 443 FALAAAELNGVLYATGGYDGNEYM-NSAERFDPREHYWTKIANMNRRRGCHSLAVLNGKLYALGGFDGSAMVPSIEVYDP 521 (592)
Q Consensus 443 ~~~~a~~~~g~IYV~GG~~~~~~~-~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~~~~Lyv~GG~~~~~~~~~v~~yD~ 521 (592)
..|+++.-++.+|.+|-......- .. ........+. .-..|+++.-++++|.+|-......-... .
T Consensus 150 ~~~~~~l~~G~v~~wG~n~~gqlg~p~-----~~~~~v~~i~----~G~~hs~al~~G~v~~wG~n~~gqlg~p~----~ 216 (282)
T 3qhy_B 150 VYTALAVKNGGVIAWGDNYFGQTTVPA-----EAQSGVDDVA----GGIFHSLALKDGKVIAWGDNRYKQTTVPT----E 216 (282)
T ss_dssp SSEEEEEETTEEEEEECCTTSTTSCCG-----GGGSSEEEEE----ECSSEEEEEETTEEEEEECCTTSTTCCCG----G
T ss_pred cCEEEEEECCEEEEecCCCCCCCCCce-----ecCCCeEEEE----ecCCEEEEEECCeEEEEECCCCCCCCCCc----c
Confidence 346666669999999854322110 00 0001122221 12335555478999999854322110000 0
Q ss_pred CCCeEEEcCCCCCCCcceEEEEECCEEEEEecccC
Q 007704 522 RLGSWMSGEPMKLSRGYLGAAVVKEAIYVIGGVKN 556 (592)
Q Consensus 522 ~t~~W~~v~~lp~~R~~~s~~v~~~~Iyv~GG~~~ 556 (592)
.......+ - .-..|+++..++++|..|-...
T Consensus 217 ~~~~v~~i---~-~G~~h~~al~~g~v~~wG~n~~ 247 (282)
T 3qhy_B 217 ALSGVSAI---A-SGEWYSLALKNGKVIAWGSSRT 247 (282)
T ss_dssp GGSSCCEE---E-ECSSCEEEEETTEEEEESTTCC
T ss_pred cCCCceEE---E-cCCCEEEEEECCEEEEecCCCC
Confidence 00011111 1 1234555444899999887543
No 319
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=40.73 E-value=1.9e+02 Score=32.10 Aligned_cols=147 Identities=15% Similarity=0.051 Sum_probs=81.6
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCC--CCCCCcceEEEE--ECCEEEEEecCCCCcccceEEEEeCCCCeE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPS--LNGTKGSLAGAT--IDNKIFAIGGGNGLECFSDVEMLDLDIGKW 432 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~--lp~~r~~~~~~~--~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W 432 (592)
++.||+.-. ..+.|+++++....-..+.. +..|+ .+++ .++.||+..-. ....++++++....-
T Consensus 464 ~g~LY~tD~-----~~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td~~----~~~~I~~~~~dG~~~ 531 (699)
T 1n7d_A 464 HSNIYWTDS-----VLGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDI 531 (699)
T ss_dssp SSBCEECCT-----TTSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECCCS----SSCCEEBCCSSSCCC
T ss_pred CCcEEEEec-----cCCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEcccC----CCCeEEEEeCCCCCe
Confidence 577887532 23568889887765544422 23332 2232 36778876421 125677777754433
Q ss_pred EEcc--cccCcccceEEEE--ECCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCC-CCCceeEEEEECCEEEEEecC
Q 007704 433 IRTR--SMLQKRFALAAAE--LNGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMN-RRRGCHSLAVLNGKLYALGGF 507 (592)
Q Consensus 433 ~~i~--~~p~~R~~~~a~~--~~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p-~~R~~~s~v~~~~~Lyv~GG~ 507 (592)
+.+. .+..| .++++ .+++||+.-.. ...|+++|+....-+.+.... ......++++..+.||+.-..
T Consensus 532 ~~l~~~~l~~P---nGlavd~~~~~LY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~ 603 (699)
T 1n7d_A 532 YSLVTENIQWP---NGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII 603 (699)
T ss_dssp CEESCSSCSSC---CCEEECTTTCCEEEEETT-----TTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECST
T ss_pred eEEEeCCCCCc---cEEEEeccCCEEEEEecC-----CCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCC
Confidence 2221 12112 12333 25789997542 367999998765444443221 112234556678899998632
Q ss_pred CCCCCCCeEEEEeCCCCeEEE
Q 007704 508 DGSAMVPSIEVYDPRLGSWMS 528 (592)
Q Consensus 508 ~~~~~~~~v~~yD~~t~~W~~ 528 (592)
...|.++|+.+++-..
T Consensus 604 -----~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 604 -----NEAIFSANRLTGSDVN 619 (699)
T ss_dssp -----TTCEEEEETTTEEEEE
T ss_pred -----CCeEEEEEccCCCceE
Confidence 3579999987765444
No 320
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=40.02 E-value=2.8e+02 Score=27.18 Aligned_cols=178 Identities=15% Similarity=0.053 Sum_probs=97.7
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCe---EEECCCCCCCCcceEEEE--ECCEEEEEecCCCCcccceEEEEeCCCCe
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDE---WTSRPSLNGTKGSLAGAT--IDNKIFAIGGGNGLECFSDVEMLDLDIGK 431 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~---W~~l~~lp~~r~~~~~~~--~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~ 431 (592)
++.||+.--. ...++++++.... +.....+..| ..+++ .++.||+.-.. ...++++++....
T Consensus 46 ~~~lyw~D~~-----~~~I~r~~~~g~~~~~~~~~~~l~~p---~glavd~~~g~ly~~d~~-----~~~I~~~~~dG~~ 112 (318)
T 3sov_A 46 HGLIYWSDVS-----EEAIKRTEFNKTESVQNVVVSGLLSP---DGLACDWLGEKLYWTDSE-----TNRIEVSNLDGSL 112 (318)
T ss_dssp GTEEEEEETT-----TTEEEEEETTSSSCCCEEEEECCSCC---CEEEEETTTTEEEEEETT-----TTEEEEEETTSCS
T ss_pred CCEEEEEECC-----CCcEEEEEccCCCceEEEEcCCCCCc---cEEEEEcCCCeEEEEECC-----CCEEEEEECCCCc
Confidence 5788887432 2568888887652 2222222221 23333 37899998532 2578889887643
Q ss_pred EEEc--ccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--CCEEEEEe
Q 007704 432 WIRT--RSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL--NGKLYALG 505 (592)
Q Consensus 432 W~~i--~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~--~~~Lyv~G 505 (592)
-+.+ ..+..|+ ..++- ++.||+.--. ....++++++....-+.+.... -..-.+++.- +++||+.-
T Consensus 113 ~~~l~~~~~~~P~---giavdp~~g~ly~td~~----~~~~I~r~~~dG~~~~~~~~~~-l~~Pnglavd~~~~~lY~aD 184 (318)
T 3sov_A 113 RKVLFWQELDQPR---AIALDPSSGFMYWTDWG----EVPKIERAGMDGSSRFIIINSE-IYWPNGLTLDYEEQKLYWAD 184 (318)
T ss_dssp CEEEECSSCSSEE---EEEEEGGGTEEEEEECS----SSCEEEEEETTSCSCEEEECSS-CSCEEEEEEETTTTEEEEEE
T ss_pred EEEEEeCCCCCcc---EEEEeCCCCEEEEEecC----CCCEEEEEEcCCCCeEEEEECC-CCCccEEEEeccCCEEEEEE
Confidence 3332 2222222 22332 6889987511 1357899998754333332111 1112234443 78999985
Q ss_pred cCCCCCCCCeEEEEeCCCCeEEEcC--CCCCCCcceEEEEECCEEEEEecccCCCccccEEEEEcC
Q 007704 506 GFDGSAMVPSIEVYDPRLGSWMSGE--PMKLSRGYLGAAVVKEAIYVIGGVKNGSEIVDTVERFKE 569 (592)
Q Consensus 506 G~~~~~~~~~v~~yD~~t~~W~~v~--~lp~~R~~~s~~v~~~~Iyv~GG~~~~~~~~~~v~~Yd~ 569 (592)
. ....|+++|.....-+.+. .+. ...++++.++.+|+.--.+ ..|+++|+
T Consensus 185 ~-----~~~~I~~~d~dG~~~~~~~~~~~~---~P~glav~~~~lywtd~~~------~~V~~~~~ 236 (318)
T 3sov_A 185 A-----KLNFIHKSNLDGTNRQAVVKGSLP---HPFALTLFEDILYWTDWST------HSILACNK 236 (318)
T ss_dssp T-----TTTEEEEEETTSCSCEEEECSCCS---CEEEEEEETTEEEEEETTT------TEEEEEET
T ss_pred C-----CCCEEEEEcCCCCceEEEecCCCC---CceEEEEeCCEEEEEecCC------CeEEEEEC
Confidence 4 2467999998754333332 232 2356777788899873321 45666665
No 321
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=39.98 E-value=27 Score=35.27 Aligned_cols=47 Identities=17% Similarity=0.291 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhHhHHHHHHHHHHHHHHHHHHHhhhhce
Q 007704 261 CQSIINELIKEVAELKAFKTEQTLKMKELEQKLVDAEAEIQRLKEHC 307 (592)
Q Consensus 261 ~~~~i~~l~~e~~~l~~~~~~~~~~~~~l~~~~~~~~rki~~l~e~~ 307 (592)
+.+..+++.+|+.+++..+.....++..|+..+...+.+++.++...
T Consensus 3 ~~~~~~~~~~~~~~~e~~i~~~~~~i~~L~~~l~~~~~~i~~l~~~i 49 (323)
T 1lwu_C 3 GQKTVQKILEEVRILEQIGVSHDAQIQELSEMWRVNQQFVTRLQQQL 49 (323)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566667777777777766666777777777777777776666543
No 322
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=39.51 E-value=2.8e+02 Score=30.09 Aligned_cols=163 Identities=10% Similarity=0.016 Sum_probs=76.4
Q ss_pred CCEEEEEeeCCCCCCcceEEEEE----CCCCeEEECCC----CCCCCcc-----eEEEEECCE-EEEE-ecCCCCcccce
Q 007704 357 NGELYIFGGGDGNSWHNTVESYS----PANDEWTSRPS----LNGTKGS-----LAGATIDNK-IFAI-GGGNGLECFSD 421 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd----~~t~~W~~l~~----lp~~r~~-----~~~~~~~~~-Iyv~-GG~~~~~~~~~ 421 (592)
++++++..... ......++.+| ..++++..+.. ....... ....+-+++ |++. +..++ ...
T Consensus 263 D~~~~~~~~~~-~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g---~~~ 338 (719)
T 1z68_A 263 DERVCLQWLKR-VQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDG---YKH 338 (719)
T ss_dssp SSEEEEEEEES-STTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTS---CEE
T ss_pred CCeEEEEEecc-ccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCC---ceE
Confidence 56665553211 12235789999 77776654431 1111111 112223554 4443 32322 467
Q ss_pred EEEEeCCCCeEEEcccccCcccceEEEEECCEEEEEecc-CCCCCCCeeEEEeCCCC--eEEEecc-CCCCCceeEEEEE
Q 007704 422 VEMLDLDIGKWIRTRSMLQKRFALAAAELNGVLYATGGY-DGNEYMNSAERFDPREH--YWTKIAN-MNRRRGCHSLAVL 497 (592)
Q Consensus 422 v~~yD~~t~~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~-~~~~~~~~v~~yD~~t~--~W~~i~~-~p~~R~~~s~v~~ 497 (592)
++.+|..+++.+.+..-....... ...-++.||+.+.. ........+|..+..++ ..+.+.. +.........+.+
T Consensus 339 l~~~~~~~~~~~~lt~~~~~v~~~-~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~ 417 (719)
T 1z68_A 339 IHYIKDTVENAIQITSGKWEAINI-FRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASF 417 (719)
T ss_dssp EEEESSCSTTCEECSCSSSCEEEE-EEECSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEE
T ss_pred EEEEECCCCceEecccCceEEEEE-EEEeCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEE
Confidence 999999888766654322211111 22234456655532 01122345777777555 3455542 2212223333334
Q ss_pred --CCEEEEEecCCCCCCCCeEEEEeCCCCeE
Q 007704 498 --NGKLYALGGFDGSAMVPSIEVYDPRLGSW 526 (592)
Q Consensus 498 --~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W 526 (592)
+++.+++...+. ....++.||..+++.
T Consensus 418 s~dg~~l~~~~s~~--~~p~~~l~d~~~g~~ 446 (719)
T 1z68_A 418 SDYAKYYALVCYGP--GIPISTLHDGRTDQE 446 (719)
T ss_dssp CGGGSSEEEEECCB--SSCEEEEECSSSCCE
T ss_pred CCCCCEEEEEcCCC--CCCeEEEEECCCCCE
Confidence 344333322211 123578888877653
No 323
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=39.38 E-value=2.8e+02 Score=27.01 Aligned_cols=121 Identities=11% Similarity=0.014 Sum_probs=63.1
Q ss_pred CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCC----CC-CceeEEEEE-CCEEEEEecCCCCCCCCeEEEEeCCCC
Q 007704 451 NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMN----RR-RGCHSLAVL-NGKLYALGGFDGSAMVPSIEVYDPRLG 524 (592)
Q Consensus 451 ~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p----~~-R~~~s~v~~-~~~Lyv~GG~~~~~~~~~v~~yD~~t~ 524 (592)
++++|+......... ..++.++ ++.-...+... .. ..-++++.- +++||+..-.........+++||+.++
T Consensus 27 ~g~~~v~~~~~~~~~-~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg 103 (343)
T 2qe8_A 27 DGRLFLSLHQFYQPE-MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNN 103 (343)
T ss_dssp TSCEEEEECGGGCCS-CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTT
T ss_pred CCCEEEEeCCCCCCc-eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCC
Confidence 688988753211111 5677777 45444333211 11 122333333 589999852110001357999999988
Q ss_pred eEEEcCCCC-----CCCcceEEEEE--CCEEEEEecccCCCccccEEEEEcCC--CcEEEcc
Q 007704 525 SWMSGEPMK-----LSRGYLGAAVV--KEAIYVIGGVKNGSEIVDTVERFKEG--QGWEEIN 577 (592)
Q Consensus 525 ~W~~v~~lp-----~~R~~~s~~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd~~--~~W~~v~ 577 (592)
+....-.++ .......+++- ++.+|+..... .....+.+||+. ..|..+.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~---~~~~~i~v~d~~~g~~~r~~~ 162 (343)
T 2qe8_A 104 QLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP---DDKAALIRVDLQTGLAARVLQ 162 (343)
T ss_dssp EEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS---GGGCEEEEEETTTCCEEEECT
T ss_pred eEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc---CCCCeEEEEECCCCCEEEEec
Confidence 743321121 11222445554 46888874310 122579999986 5577663
No 324
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=37.93 E-value=4.7e+02 Score=29.27 Aligned_cols=196 Identities=14% Similarity=0.126 Sum_probs=99.7
Q ss_pred eEEEEECCCCeEEECCCCCC-----CCcceEEEEE---CCEEEEEecCCCCcccceEEEEeCCCCeEEEccc-cc-----
Q 007704 374 TVESYSPANDEWTSRPSLNG-----TKGSLAGATI---DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRS-ML----- 439 (592)
Q Consensus 374 ~v~~yd~~t~~W~~l~~lp~-----~r~~~~~~~~---~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~-~p----- 439 (592)
-+++-+-...+|+.+...+. .+..++++.. .+.||+..|.........+++=+-.-.+|+++.. ++
T Consensus 38 gv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~ 117 (789)
T 1sqj_A 38 GAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGAND 117 (789)
T ss_dssp CEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTS
T ss_pred CEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccC
Confidence 37777778889999865332 1233344433 2568887653210111344444445578998742 11
Q ss_pred Ccc-cceEEEEE---CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCC---CCceeEEEEE----CCEEEEEecCC
Q 007704 440 QKR-FALAAAEL---NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNR---RRGCHSLAVL----NGKLYALGGFD 508 (592)
Q Consensus 440 ~~R-~~~~a~~~---~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~---~R~~~s~v~~----~~~Lyv~GG~~ 508 (592)
..| ..+.+++. .+.+|+. ... ..+++=+=.-.+|+.+...+. .-.+...+.+ .+.||+.....
T Consensus 118 ~~~~~~~~iav~p~~~~~v~~g-~~~-----~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 191 (789)
T 1sqj_A 118 MGRNNGERLAVNPFNSNEVWMG-TRT-----EGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAP 191 (789)
T ss_dssp TTTTSCCCEEEETTEEEEEEEE-CSS-----SCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESST
T ss_pred CCccceeEEEEcCCCCCEEEEE-ecc-----CCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCC
Confidence 122 22344444 3456663 311 234443333468999875441 1122333333 24677754321
Q ss_pred CCCCCCeEEEEeCCCCeEEEcCCCCCCC----------------cceEEEEE--CCEEEEEecccCC--CccccEEEEEc
Q 007704 509 GSAMVPSIEVYDPRLGSWMSGEPMKLSR----------------GYLGAAVV--KEAIYVIGGVKNG--SEIVDTVERFK 568 (592)
Q Consensus 509 ~~~~~~~v~~yD~~t~~W~~v~~lp~~R----------------~~~s~~v~--~~~Iyv~GG~~~~--~~~~~~v~~Yd 568 (592)
..+++=.-.-.+|+.+..++... ..+.+++. .+.||+..+.... ......|++.+
T Consensus 192 -----~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g~~g~l~~S~ 266 (789)
T 1sqj_A 192 -----QGMYVTHDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQN 266 (789)
T ss_dssp -----TCEEEESSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSSSCCCCCCEEEEE
T ss_pred -----CeEEEEcCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCCCCCCCCCceEEEEe
Confidence 23443333345899987554322 01444433 7889887432100 00124577777
Q ss_pred CC-CcEEEccccC
Q 007704 569 EG-QGWEEINSRA 580 (592)
Q Consensus 569 ~~-~~W~~v~~~p 580 (592)
-. .+|+.+...|
T Consensus 267 DgG~tW~~~~~~~ 279 (789)
T 1sqj_A 267 RTSGAWDDITPRV 279 (789)
T ss_dssp TTTCCEEECCCCT
T ss_pred CCCCceEECcCCC
Confidence 77 9999987644
No 325
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=37.66 E-value=36 Score=22.24 Aligned_cols=29 Identities=7% Similarity=0.182 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHhhhhHhHHHHHHHHHHH
Q 007704 265 INELIKEVAELKAFKTEQTLKMKELEQKL 293 (592)
Q Consensus 265 i~~l~~e~~~l~~~~~~~~~~~~~l~~~~ 293 (592)
.++|..+++++..+...+..+...|++.+
T Consensus 3 MnQLEdKvEeLl~~~~~L~~EV~RLk~lL 31 (34)
T 2bni_A 3 MKQIEDKLEEILSKGHHICNELARIKKLL 31 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHccHHHHHHHHHHHHHh
Confidence 47888888999888888888877776543
No 326
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=37.17 E-value=1.8e+02 Score=34.46 Aligned_cols=177 Identities=13% Similarity=0.120 Sum_probs=99.5
Q ss_pred cCcceEEEEECCEEEEEeeCCCCCCcceEEEEECCCCeEEECCC-----CCCCCcceEEEEE---CCEEEEEecCCCCcc
Q 007704 347 ARSYASAAMLNGELYIFGGGDGNSWHNTVESYSPANDEWTSRPS-----LNGTKGSLAGATI---DNKIFAIGGGNGLEC 418 (592)
Q Consensus 347 ~R~~~s~v~~~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~-----lp~~r~~~~~~~~---~~~Iyv~GG~~~~~~ 418 (592)
.-.++++....+.+ ++|.-....|...++.|......|..-.. +.....++++++. +...||+|-- ....
T Consensus 333 ~q~GfSa~~t~d~~-~~GapG~~~w~G~v~~~~~~~~~~~~~~~~~~~~~~~sylGySVa~~~~~g~~~~v~GAP-~~~~ 410 (1095)
T 3k6s_A 333 AQEGFSAVFTPDGP-VLGAVGSFTWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAP-RYQH 410 (1095)
T ss_dssp CCTTSSEECCTTCC-EEEESCSTTTTBEEEECCSSSCCEEECCCSSCCCCCSCCBTSSEECCCCSSSCEEEEEET-TGGG
T ss_pred ccccccceecCCcc-eEcccccCCccceeEEecCCCcceeeccccccccccccccceeeEEeccCCceEEEEEcc-cccc
Confidence 34466666555555 88987667777889999877655433211 1222234455442 2345676642 2234
Q ss_pred cceEEEEeCCCCeEEEcccc----cCcccceEEEEEC------CEEEEEeccC--CCCCCCeeEEEeCCC--CeEEEecc
Q 007704 419 FSDVEMLDLDIGKWIRTRSM----LQKRFALAAAELN------GVLYATGGYD--GNEYMNSAERFDPRE--HYWTKIAN 484 (592)
Q Consensus 419 ~~~v~~yD~~t~~W~~i~~~----p~~R~~~~a~~~~------g~IYV~GG~~--~~~~~~~v~~yD~~t--~~W~~i~~ 484 (592)
.-.+++|....+.|.....+ ....++++++..+ .-++++|.-. .......+++|.... ..|.....
T Consensus 411 ~G~V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~~~~~~~~~~ 490 (1095)
T 3k6s_A 411 TGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAV 490 (1095)
T ss_dssp TCEEEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSSTTCCCSCSS
T ss_pred cceEEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCCCcceeeeEE
Confidence 56899998888888765422 2345677777642 2466776421 112235678875433 45764322
Q ss_pred C------CCCCceeEEEEEC-----C--EEEEEecCCCCCCCCeEEEEeCCCC-eE
Q 007704 485 M------NRRRGCHSLAVLN-----G--KLYALGGFDGSAMVPSIEVYDPRLG-SW 526 (592)
Q Consensus 485 ~------p~~R~~~s~v~~~-----~--~Lyv~GG~~~~~~~~~v~~yD~~t~-~W 526 (592)
+ +..|++.+++.++ | -| ++|.-........+++|.-..+ .|
T Consensus 491 l~g~~~~~~~~FG~sva~~gD~NgDG~~Dl-~VGAP~~~~~~G~vyi~~g~~~~g~ 545 (1095)
T 3k6s_A 491 LYGEQGHPWGRFGAALTVLGDVNGDKLTDV-VIGAPGEEENRGAVYLFHGVLGPSI 545 (1095)
T ss_dssp CCCCCSCSSCCBTSCEEEEECSSSSSCCEE-EEECTTTTTSCCBEEEEEBCSSSCB
T ss_pred eecccCCccccCccceEeecccCCCCCcCE-EEeCCcCCCCCCEEEEecCCCCCCc
Confidence 1 3467888887752 2 25 4443222234567888887665 55
No 327
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=36.55 E-value=1.2e+02 Score=33.62 Aligned_cols=141 Identities=11% Similarity=0.029 Sum_probs=74.1
Q ss_pred EEEEECCEEEEEecCCCCcccceEEEEeCCCC-eEE--Ecc----cccCcccceEEEEE--CCEEEEEeccCCCCCCCee
Q 007704 399 AGATIDNKIFAIGGGNGLECFSDVEMLDLDIG-KWI--RTR----SMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSA 469 (592)
Q Consensus 399 ~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~-~W~--~i~----~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v 469 (592)
+++..++++|+|-| +.+|+++.... ... .+. .+|. ... ++... ++++|+|-| +..
T Consensus 448 Ait~~rg~~yfFKg-------~~yWr~~~~~~~~~~P~~Is~~wp~LP~-~ID-AA~~~~~~~k~yFFkG-------~~y 511 (631)
T 1ck7_A 448 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPE-KID-AVYEAPQEEKAVFFAG-------NEY 511 (631)
T ss_dssp EEEECSSSEEEECS-------SEEEEESCTTSCCEEEEEGGGTCTTSCS-SCS-BCCEETTTTEEEEEET-------TEE
T ss_pred eeEecCCcEEEEcC-------CEEEEEcCCCCCCCCceeccccCCCCCc-cce-EEEEECCCCEEEEEec-------CEE
Confidence 45566899999977 46777766442 111 121 2222 122 22222 678999977 567
Q ss_pred EEEeCCCC--eE-EEecc--CCCC-CceeEEEE--ECCEEEEEecCCCCCCCCeEEEEeCCCCeEE-----EcCC-CC-C
Q 007704 470 ERFDPREH--YW-TKIAN--MNRR-RGCHSLAV--LNGKLYALGGFDGSAMVPSIEVYDPRLGSWM-----SGEP-MK-L 534 (592)
Q Consensus 470 ~~yD~~t~--~W-~~i~~--~p~~-R~~~s~v~--~~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~-----~v~~-lp-~ 534 (592)
|+|+-.+. -+ ..|.. .|.. ..--++.. .++++|+|-| +..|+||..+++-. .+.. .+ .
T Consensus 512 Wry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG-------~~ywryd~~~~~vd~gYPk~i~~~w~G~ 584 (631)
T 1ck7_A 512 WIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNAI 584 (631)
T ss_dssp EEEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEET-------TEEEEEETTTTEECTTCCEETTTSCSSC
T ss_pred EEECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEEC-------CEEEEEcCCcccccCCCCcchHhhcCCC
Confidence 88874210 01 11211 1211 11112222 3789999977 46899998765321 1221 11 1
Q ss_pred CCcceEEEEEC--CEEEEEecccCCCccccEEEEEcCC
Q 007704 535 SRGYLGAAVVK--EAIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 535 ~R~~~s~~v~~--~~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
+...-++.... +++|+|-| +..|+||..
T Consensus 585 p~~iDAAf~~~~~g~~YFFkG--------~~Ywr~d~~ 614 (631)
T 1ck7_A 585 PDNLDAVVDLQGGGHSYFFKG--------AYYLKLENQ 614 (631)
T ss_dssp CTTCCEEECCTTSCBCEEEET--------TEEECCBTT
T ss_pred CCCCcEeEEEcCCCeEEEEEC--------CEEEEEeCc
Confidence 22222333333 78999888 447888865
No 328
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=36.14 E-value=4.4e+02 Score=28.38 Aligned_cols=153 Identities=9% Similarity=-0.073 Sum_probs=72.3
Q ss_pred ceEEEEECCCCe---EEECCCC---CCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEe----CCCCeEEEccc---
Q 007704 373 NTVESYSPANDE---WTSRPSL---NGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLD----LDIGKWIRTRS--- 437 (592)
Q Consensus 373 ~~v~~yd~~t~~---W~~l~~l---p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD----~~t~~W~~i~~--- 437 (592)
.+++.+|..+.+ |..+... .........+.+ ++++++.... .......++++| +.++++..+..
T Consensus 224 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~-~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~ 302 (719)
T 1z68_A 224 VRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLK-RVQNVSVLSICDFREDWQTWDCPKTQEHIE 302 (719)
T ss_dssp EEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEE-SSTTEEEEEEEEECSSSSSEECCGGGEEEE
T ss_pred eEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEec-cccCeEEEEEEcccCCCCCCceEEEEeccc
Confidence 478899988765 2343221 011111222223 6776665321 112235789999 87776654431
Q ss_pred -ccCcccc---e-EEEE-ECC-EEEEEec-cCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEECCEEEEEecC-C
Q 007704 438 -MLQKRFA---L-AAAE-LNG-VLYATGG-YDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVLNGKLYALGGF-D 508 (592)
Q Consensus 438 -~p~~R~~---~-~a~~-~~g-~IYV~GG-~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~~~~Lyv~GG~-~ 508 (592)
....... + ..+. -++ .|++... .++ ...++.+|+.++....+..-...... ....-++.||..+.. .
T Consensus 303 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g---~~~l~~~~~~~~~~~~lt~~~~~v~~-~~~~d~~~i~~~~~~~~ 378 (719)
T 1z68_A 303 ESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDG---YKHIHYIKDTVENAIQITSGKWEAIN-IFRVTQDSLFYSSNEFE 378 (719)
T ss_dssp ECSSSCSSSSSCCCCEECTTSSCEEEEEECTTS---CEEEEEESSCSTTCEECSCSSSCEEE-EEEECSSEEEEEESCGG
T ss_pred ccCCceEccccCCccEECCCCCeEEEEEEccCC---ceEEEEEECCCCceEecccCceEEEE-EEEEeCCEEEEEEecCC
Confidence 1111111 0 1122 244 4544332 222 36789999988876666532222111 112224455555432 0
Q ss_pred CCCCCCeEEEEeCCCC--eEEEcC
Q 007704 509 GSAMVPSIEVYDPRLG--SWMSGE 530 (592)
Q Consensus 509 ~~~~~~~v~~yD~~t~--~W~~v~ 530 (592)
.......+|..+..+. ..+.+.
T Consensus 379 ~~~~~~~l~~~~~~~g~~~~~~l~ 402 (719)
T 1z68_A 379 EYPGRRNIYRISIGSYPPSKKCVT 402 (719)
T ss_dssp GCTTCBEEEEEECSSSSCCEEESS
T ss_pred CCCceEEEEEEeCCCCCCCceecc
Confidence 1122346778877554 345554
No 329
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=35.71 E-value=5.1e+02 Score=28.99 Aligned_cols=217 Identities=14% Similarity=0.126 Sum_probs=109.6
Q ss_pred ceEEEEE---CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCC-CC-----CCC-cceEEEEE---CCEEEEEecCCCC
Q 007704 350 YASAAML---NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPS-LN-----GTK-GSLAGATI---DNKIFAIGGGNGL 416 (592)
Q Consensus 350 ~~s~v~~---~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~-lp-----~~r-~~~~~~~~---~~~Iyv~GG~~~~ 416 (592)
.++++.. .+.+|+..|.........+++=+-.-.+|+.+.. ++ ..| ..+.+++. .+.+|+ |...
T Consensus 66 i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~-g~~~-- 142 (789)
T 1sqj_A 66 TESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWM-GTRT-- 142 (789)
T ss_dssp EEEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEE-ECSS--
T ss_pred eeEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEE-Eecc--
Confidence 4444443 2568887664221111456655556679988742 11 112 12334443 345666 3311
Q ss_pred cccceEEEEeCCCCeEEEcccccC---cccceEEEEE----CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCC
Q 007704 417 ECFSDVEMLDLDIGKWIRTRSMLQ---KRFALAAAEL----NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRR 489 (592)
Q Consensus 417 ~~~~~v~~yD~~t~~W~~i~~~p~---~R~~~~a~~~----~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R 489 (592)
..+++=+=.-.+|+.+..++. .-.+.....+ .+.||+..... ..+++=.=.-.+|+.+..++...
T Consensus 143 ---~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~-----~~v~~S~DgG~TW~~~~~~~~~~ 214 (789)
T 1sqj_A 143 ---EGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAP-----QGMYVTHDGGVSWEPVAGQPSSW 214 (789)
T ss_dssp ---SCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESST-----TCEEEESSTTSSCEECTTCCCSC
T ss_pred ---CCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCC-----CeEEEEcCCCcCcccCCCCcCcc
Confidence 234443334568998875441 1122333333 24677754321 22332222345799987544322
Q ss_pred ----------------ceeEEEEE--CCEEEEEecCCCC---CCCCeEEEEeCCCCeEEEcCCCCCC---------Cc--
Q 007704 490 ----------------GCHSLAVL--NGKLYALGGFDGS---AMVPSIEVYDPRLGSWMSGEPMKLS---------RG-- 537 (592)
Q Consensus 490 ----------------~~~s~v~~--~~~Lyv~GG~~~~---~~~~~v~~yD~~t~~W~~v~~lp~~---------R~-- 537 (592)
..|.++.. .+.||+..+.... .....+++.+-.-.+|+.+.+.|.. ..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g~~g~l~~S~DgG~tW~~~~~~~~~~~p~~~~~~~~~~ 294 (789)
T 1sqj_A 215 LNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQNRTSGAWDDITPRVGNSSPAPYNNQTFPA 294 (789)
T ss_dssp CHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSSSCCCCCCEEEEETTTCCEEECCCCTTTEESCCCSSCCSCC
T ss_pred ccccccccCcccccccccceeEEcCCCCeEEEEEecCCCCCCCCCceEEEEeCCCCceEECcCCCCcccccccccccccc
Confidence 11444443 7889987432110 1234688888888999999765431 11
Q ss_pred -c-eEEEEE---CCEEEEEecccCCCccccEEEEEcCC-CcEEEcc
Q 007704 538 -Y-LGAAVV---KEAIYVIGGVKNGSEIVDTVERFKEG-QGWEEIN 577 (592)
Q Consensus 538 -~-~s~~v~---~~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~W~~v~ 577 (592)
+ ..+++. .+.||+.++..........+++=+-. .+|+.+.
T Consensus 295 ~g~~~lav~p~~~~~v~~~~~~~~~~~~~~~l~~S~DgG~tW~~~~ 340 (789)
T 1sqj_A 295 GGFCGLSVDATNPNRLVVITLDRDPGPALDSIYLSTDAGATWKDVT 340 (789)
T ss_dssp CEEEEEEEETTEEEEEEEEEECCCSCSSCCCEEEESSTTSSEEEHH
T ss_pred CceEEEEECCCCCCEEEEEEeccCCCcccccEEEecCCCCCceeCc
Confidence 2 334443 24677766532210011346666655 8999987
No 330
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=34.59 E-value=3.9e+02 Score=27.25 Aligned_cols=115 Identities=10% Similarity=0.101 Sum_probs=57.0
Q ss_pred CEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEe
Q 007704 405 NKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYWTKI 482 (592)
Q Consensus 405 ~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i 482 (592)
+.+++.|+.+ ..+.+||..+..-.. ..... .....++.+ +++.++.|+.+ ..+.+||++...-..+
T Consensus 162 ~~~las~s~D-----g~v~iwD~~~~~~~~-~~~~~-~~~v~~v~wspdg~~lasgs~d-----g~v~iwd~~~~~~~~~ 229 (434)
T 2oit_A 162 PSMVAVCLAD-----GSIAVLQVTETVKVC-ATLPS-TVAVTSVCWSPKGKQLAVGKQN-----GTVVQYLPTLQEKKVI 229 (434)
T ss_dssp TTEEEEEETT-----SCEEEEEESSSEEEE-EEECG-GGCEEEEEECTTSSCEEEEETT-----SCEEEECTTCCEEEEE
T ss_pred CCEEEEEECC-----CeEEEEEcCCCccee-eccCC-CCceeEEEEcCCCCEEEEEcCC-----CcEEEEccCCcccccc
Confidence 6788888765 368889988763221 11111 112222222 56777777755 3588899883333333
Q ss_pred ccCCC--C-C--ceeEEEEECCEEEEE--ecCCCC-CCCCeEEEEeCCC------CeEEEcCC
Q 007704 483 ANMNR--R-R--GCHSLAVLNGKLYAL--GGFDGS-AMVPSIEVYDPRL------GSWMSGEP 531 (592)
Q Consensus 483 ~~~p~--~-R--~~~s~v~~~~~Lyv~--GG~~~~-~~~~~v~~yD~~t------~~W~~v~~ 531 (592)
..... . . ...++....+..|++ ...++. ....++.+||..+ ..|+....
T Consensus 230 ~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~ 292 (434)
T 2oit_A 230 PCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFME 292 (434)
T ss_dssp CCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCC
T ss_pred cCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEeccc
Confidence 22111 1 0 112222223333432 222222 3345688888764 35776543
No 331
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=34.27 E-value=4e+02 Score=27.34 Aligned_cols=142 Identities=13% Similarity=0.109 Sum_probs=73.8
Q ss_pred CEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEE-EECCEEEEEecCCCCcccceEEEEeCCCCeEE---
Q 007704 358 GELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGA-TIDNKIFAIGGGNGLECFSDVEMLDLDIGKWI--- 433 (592)
Q Consensus 358 ~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~-~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~--- 433 (592)
+.||+.=.. +.++++|+.++....+.. ...+. ..++ ..++.||+...... .....+..++.... |.
T Consensus 153 g~Lyv~D~~------~~I~~id~~~g~v~~~~~-~~~~P-~giavd~dG~lyVad~~~~-~~~~gv~~~~~~~~-~~~~~ 222 (433)
T 4hw6_A 153 DDLYWVGQR------DAFRHVDFVNQYVDIKTT-NIGQC-ADVNFTLNGDMVVVDDQSS-DTNTGIYLFTRASG-FTERL 222 (433)
T ss_dssp CEEEEECBT------SCEEEEETTTTEEEEECC-CCSCE-EEEEECTTCCEEEEECCSC-TTSEEEEEECGGGT-TCCEE
T ss_pred CEEEEEeCC------CCEEEEECCCCEEEEeec-CCCCc-cEEEECCCCCEEEEcCCCC-cccceEEEEECCCC-eeccc
Confidence 789987332 679999999988877643 11111 2222 23566988853221 11233555655322 21
Q ss_pred EcccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCeE-EEeccCCCCCceeEEEEE--CCEEEEEecCC
Q 007704 434 RTRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHYW-TKIANMNRRRGCHSLAVL--NGKLYALGGFD 508 (592)
Q Consensus 434 ~i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~W-~~i~~~p~~R~~~s~v~~--~~~Lyv~GG~~ 508 (592)
.++.+..| ..+++. ++.||+.-.. ...+++||+.++.. ..+...........++.- ++.||+.--
T Consensus 223 ~~~~~~~P---~giavd~~~G~lyv~d~~-----~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~-- 292 (433)
T 4hw6_A 223 SLCNARGA---KTCAVHPQNGKIYYTRYH-----HAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN-- 292 (433)
T ss_dssp EEEECSSB---CCCEECTTTCCEEECBTT-----CSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET--
T ss_pred cccccCCC---CEEEEeCCCCeEEEEECC-----CCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC--
Confidence 22222111 222332 6788886432 25799999987665 333222111112223333 345998853
Q ss_pred CCCCCCeEEEEeCC
Q 007704 509 GSAMVPSIEVYDPR 522 (592)
Q Consensus 509 ~~~~~~~v~~yD~~ 522 (592)
....|++++..
T Consensus 293 ---~~~~I~~~~~d 303 (433)
T 4hw6_A 293 ---GKHCIYRVDYN 303 (433)
T ss_dssp ---TTTEEEEEEBC
T ss_pred ---CCCEEEEEeCC
Confidence 23568887654
No 332
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=33.53 E-value=1.1e+02 Score=31.44 Aligned_cols=71 Identities=13% Similarity=0.027 Sum_probs=43.2
Q ss_pred CCEEEEEec--C--CCCcccceEEEEeCCCCeEEEcccccCcccceEEEE-ECC--EEEEEeccCCCCCCCeeEEEeCCC
Q 007704 404 DNKIFAIGG--G--NGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAE-LNG--VLYATGGYDGNEYMNSAERFDPRE 476 (592)
Q Consensus 404 ~~~Iyv~GG--~--~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~-~~g--~IYV~GG~~~~~~~~~v~~yD~~t 476 (592)
++++||.-+ . .....-+.++++|..|++-.. .++.+..-.++++ -++ .+|+..+. .+++.+||..+
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~--~i~vg~~~~~lavs~D~~~~ly~tn~~-----~~~VsViD~~t 363 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLA--KFEMGHEIDSINVSQDEKPLLYALSTG-----DKTLYIHDAES 363 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEE--EEEEEEEECEEEECSSSSCEEEEEETT-----TTEEEEEETTT
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEE--EEECCCCcceEEECCCCCeEEEEEcCC-----CCeEEEEECCC
Confidence 688999743 1 112235789999999886543 3333332333333 244 47776542 36899999998
Q ss_pred CeEEE
Q 007704 477 HYWTK 481 (592)
Q Consensus 477 ~~W~~ 481 (592)
++-..
T Consensus 364 ~k~~~ 368 (386)
T 3sjl_D 364 GEELR 368 (386)
T ss_dssp CCEEE
T ss_pred CcEEE
Confidence 87543
No 333
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=33.16 E-value=5.5e+02 Score=28.58 Aligned_cols=197 Identities=13% Similarity=0.131 Sum_probs=101.0
Q ss_pred eEEEEECCCCeEEECCC-C-----CC---CCcceEEEEE----CCEEEEEecCCC-CcccceEEEEeCCCCeEEEccc-c
Q 007704 374 TVESYSPANDEWTSRPS-L-----NG---TKGSLAGATI----DNKIFAIGGGNG-LECFSDVEMLDLDIGKWIRTRS-M 438 (592)
Q Consensus 374 ~v~~yd~~t~~W~~l~~-l-----p~---~r~~~~~~~~----~~~Iyv~GG~~~-~~~~~~v~~yD~~t~~W~~i~~-~ 438 (592)
-+++-+-...+|+.+.. + +. .......+.+ .+.+|+..|... ......+++=+=.-.+|+++.. .
T Consensus 44 gv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~ 123 (763)
T 3a0f_A 44 GTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPV 123 (763)
T ss_dssp CEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTTCSCCEEEEESSTTSSCEEEECSS
T ss_pred cEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccccCCCCceEEEECCCCCCceeccCCc
Confidence 37788878889999865 3 21 1222223333 367888765211 1112334433334568998752 1
Q ss_pred c-----Cccc-ceEEEEE---CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCC---ceeEEEEE----CCEEE
Q 007704 439 L-----QKRF-ALAAAEL---NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRR---GCHSLAVL----NGKLY 502 (592)
Q Consensus 439 p-----~~R~-~~~a~~~---~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R---~~~s~v~~----~~~Ly 502 (592)
+ ..|. ...+++. .+.+|+.+. . ..+++=+=.-.+|+++..++... .....+.+ .+.||
T Consensus 124 ~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~-~-----~~l~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~ 197 (763)
T 3a0f_A 124 PMGANDMGRNGGERLAVNPHWTDELWFGSR-T-----QGLWRSTDRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAY 197 (763)
T ss_dssp CCCTTSTTTTSBCCEEECTTSTTCEEEECS-S-----SCEEEESSTTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEE
T ss_pred ccCccccCccccceEEECCCCCCEEEEEeC-C-----CcEEEECCCCcCccccccCcccCCCccceEEEEECCCCCCEEE
Confidence 1 1221 1234443 367777542 1 23333322346799987665432 22333333 24677
Q ss_pred EEecCCCCCCCCeEEEEeCCCCeEEEcCCCCC--------------------CCcceEEEEE-CCEEEEEecccCC--Cc
Q 007704 503 ALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKL--------------------SRGYLGAAVV-KEAIYVIGGVKNG--SE 559 (592)
Q Consensus 503 v~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~--------------------~R~~~s~~v~-~~~Iyv~GG~~~~--~~ 559 (592)
+.....+ .+++=+-.-.+|+.+...|. +...+.+++. ++.+|+....... +.
T Consensus 198 ~~~~~~g-----~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~ 272 (763)
T 3a0f_A 198 VASHAVG-----GLWVTWDGGANWSQVGGQPTQWSDWTKSIVAASGTAIQSSGPLPIKIALGKNGRLYITYSDAPGPWGV 272 (763)
T ss_dssp EEESSTT-----CEEEESSSSSSCEECTTCCCSCCHHHHHHHHHHCCCCSSSSCEEEEEEECTTSCEEEEEESSCSSSCC
T ss_pred EEEeCCC-----eEEEECCCCCCccccCCCccccccccccccccccccccCCCCcceeEEECCCCcEEEEeccCCCCCCC
Confidence 7543211 24443333457999875552 2233333333 5778887432100 01
Q ss_pred cccEEEEEcCC-CcEEEccccCC
Q 007704 560 IVDTVERFKEG-QGWEEINSRAI 581 (592)
Q Consensus 560 ~~~~v~~Yd~~-~~W~~v~~~p~ 581 (592)
....+++++-. .+|+.+...|.
T Consensus 273 ~~g~v~rS~D~G~tW~~~~~~~~ 295 (763)
T 3a0f_A 273 LYGEVWSYDPTNGNWKHITPSRE 295 (763)
T ss_dssp CCEEEEEEETTTTEEEECCTTSS
T ss_pred cceeEEEEeCCCCceEECCCCCC
Confidence 12568888877 99999876553
No 334
>1lwu_A Fibrinogen alpha-1 chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: h.1.8.1 PDB: 1n73_A*
Probab=31.77 E-value=76 Score=26.82 Aligned_cols=51 Identities=16% Similarity=0.219 Sum_probs=36.9
Q ss_pred ccccccHHHHHHHHHHHHHHHHhhhhHhHHHHHHHHHHHHHHHHHHHhhhh
Q 007704 255 TCSSSRCQSIINELIKEVAELKAFKTEQTLKMKELEQKLVDAEAEIQRLKE 305 (592)
Q Consensus 255 ~~~~~~~~~~i~~l~~e~~~l~~~~~~~~~~~~~l~~~~~~~~rki~~l~e 305 (592)
+..++-|-++..+|..+++-|..+..++.+.+..|++.......+++.++-
T Consensus 14 n~~dn~y~qvsedLrrrIe~LkrKV~~Qvq~i~~Lq~nVrdQvveMkRLEV 64 (119)
T 1lwu_A 14 NELEVRYSEVLRELERRIIHLQRRINMQLQQLTLLQHNIKTQVSQILRVEV 64 (119)
T ss_dssp CTTTHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 444566777888888888888888888888777777777666555555543
No 335
>3t97_C Nuclear pore glycoprotein P62; nucleoporin, coiled-coil, nuclear pore complex, central TRAN channel, alpha helical proteins, triple helix; 2.80A {Rattus norvegicus}
Probab=31.74 E-value=1e+02 Score=23.34 Aligned_cols=48 Identities=17% Similarity=0.144 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhHhHHHHHHHHHHHHHHHHHHHhhhhcee
Q 007704 261 CQSIINELIKEVAELKAFKTEQTLKMKELEQKLVDAEAEIQRLKEHCL 308 (592)
Q Consensus 261 ~~~~i~~l~~e~~~l~~~~~~~~~~~~~l~~~~~~~~rki~~l~e~~~ 308 (592)
.-+.|.+|..++.+.+......++++.++.+.+.+.+.-+..+++...
T Consensus 10 NgekI~~L~~~v~~~e~~Q~~ldq~Ld~Ie~QQ~ELe~~L~~~E~~v~ 57 (64)
T 3t97_C 10 NGEKITSLHREVEKVKLDQKRLDQELDFILSQQKELEDLLSPLEESVK 57 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTTTTTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999988888877776443
No 336
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=31.47 E-value=5.7e+02 Score=28.25 Aligned_cols=209 Identities=14% Similarity=0.132 Sum_probs=107.9
Q ss_pred CEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCC----cceEEEEE----CCEEEEEecCCC--Ccc-cceEEEEe
Q 007704 358 GELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTK----GSLAGATI----DNKIFAIGGGNG--LEC-FSDVEMLD 426 (592)
Q Consensus 358 ~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r----~~~~~~~~----~~~Iyv~GG~~~--~~~-~~~v~~yD 426 (592)
+.||+. ... ..+|+.+-...+|+.+...+... .....+.+ .+.||+..|... ... ...+++=.
T Consensus 36 ~~~~~~-~~~-----ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~ 109 (737)
T 2cn3_A 36 DLIYAR-AAI-----GGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRST 109 (737)
T ss_dssp TCEEEE-CSS-----SCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEES
T ss_pred CEEEEE-ecC-----CcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeC
Confidence 567763 322 24899999999999986533211 12233333 357888765311 111 12333333
Q ss_pred CCCCeEEEccc-cc-----Ccc-cceEEEEE---CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCCCCC-------
Q 007704 427 LDIGKWIRTRS-ML-----QKR-FALAAAEL---NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMNRRR------- 489 (592)
Q Consensus 427 ~~t~~W~~i~~-~p-----~~R-~~~~a~~~---~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R------- 489 (592)
=.-.+|+.+.. .+ ..+ ..+.+++. .+.+|+... .+ ..+++=+=...+|+++..+|...
T Consensus 110 DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~-~g----~gl~~S~DgG~tW~~~~~~~~~~~~~~~p~ 184 (737)
T 2cn3_A 110 DRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR-CG----NGLWRSTDYGVTWSKVESFPNPGTYIYDPN 184 (737)
T ss_dssp SSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS-TT----CCEEEESSTTSSCEECTTCCCCCCCBSCTT
T ss_pred CCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec-cC----CcEEEeCCCCcceecccCCCCCcccccCcc
Confidence 34568988742 11 012 22344442 356776431 11 23333322345799987655321
Q ss_pred -------ceeEEEEEC----------CEEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEE
Q 007704 490 -------GCHSLAVLN----------GKLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAVV-KEAIYVI 551 (592)
Q Consensus 490 -------~~~s~v~~~----------~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v~-~~~Iyv~ 551 (592)
.+...+.++ +.||+--+ ++. ..+++=.-.-.+|+.+..+|.....+.+++- ++.+|+.
T Consensus 185 ~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~-~~~---~~v~~S~DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~~~ 260 (737)
T 2cn3_A 185 FDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVA-DKN---ESIYRSTDGGVTWKAVPGQPKGLLPHHGVLASNGMLYIT 260 (737)
T ss_dssp STTTCSBCCEEEEEECGGGSCTTSCCSCEEEEES-CSS---CCEEEESSTTSCCEECTTCCCSSEEEEEEECTTSEEEEE
T ss_pred cccccCCCCEEEEEcCCCCcccCCCCCEEEEEec-CCC---ccEEEEcCCCCceEECCCCCCcccceEEEECCCCeEEEE
Confidence 122333442 26666421 111 1244433334679999877765444444433 6788887
Q ss_pred ecccCC---CccccEEEEEcCC-CcEEEccccCC
Q 007704 552 GGVKNG---SEIVDTVERFKEG-QGWEEINSRAI 581 (592)
Q Consensus 552 GG~~~~---~~~~~~v~~Yd~~-~~W~~v~~~p~ 581 (592)
.+.... +.....|++++.. .+|+.+...|.
T Consensus 261 ~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~~ 294 (737)
T 2cn3_A 261 YGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPY 294 (737)
T ss_dssp EESSCCSSCCSCCEEEEEEETTTCCEEECCSSCT
T ss_pred ecCCCCccccccCceEEEEeCCCCCEEEccCCCC
Confidence 543210 1123568898888 99999877654
No 337
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=30.81 E-value=5.5e+02 Score=27.91 Aligned_cols=172 Identities=12% Similarity=0.041 Sum_probs=90.1
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECC-CCCC-CCcceEEEE-ECCEEEEEecCCCCcccceEEEEeCCCCeE-
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRP-SLNG-TKGSLAGAT-IDNKIFAIGGGNGLECFSDVEMLDLDIGKW- 432 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~-~lp~-~r~~~~~~~-~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W- 432 (592)
+|+.+..++.++ .+..||..+ .+..+. .++. .+..++++. -+|++++.||.+ ..+.+||..++.-
T Consensus 96 dG~~LAs~s~dg-----~V~iwd~~~-~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~D-----GtVkIWd~~~~~l~ 164 (588)
T 2j04_A 96 IDDWMAVLSNNG-----NVSVFKDNK-MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNED-----GELQFFSIRKNSEN 164 (588)
T ss_dssp SSSCEEEEETTS-----CEEEEETTE-EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETT-----SEEEEEECCCCTTT
T ss_pred CCCEEEEEeCCC-----cEEEEeCCc-eeeeccCCCccccccEEEEEEcCCCCEEEEEcCC-----CEEEEEECCCCccc
Confidence 777777877664 466777443 454443 2221 233444442 388888888865 4788999887631
Q ss_pred ----EEccccc---C--cccceEEEEECCEEEEEeccCCCCCCCeeEEEeCCCCe----EEEeccCCCCCceeEEEEECC
Q 007704 433 ----IRTRSML---Q--KRFALAAAELNGVLYATGGYDGNEYMNSAERFDPREHY----WTKIANMNRRRGCHSLAVLNG 499 (592)
Q Consensus 433 ----~~i~~~p---~--~R~~~~a~~~~g~IYV~GG~~~~~~~~~v~~yD~~t~~----W~~i~~~p~~R~~~s~v~~~~ 499 (592)
..+..+. . ...-.+.+...+. ++.+|.+ +.+..+|+.++. |..+..... ..-.+++..+
T Consensus 165 ~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D-----~tVrlWd~~~~~~~~~~~tL~~~h~-~~V~svaFsg- 236 (588)
T 2j04_A 165 TPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSN-----NSVFSMTVSASSHQPVSRMIQNASR-RKITDLKIVD- 236 (588)
T ss_dssp CCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETT-----CCEEEECCCSSSSCCCEEEEECCCS-SCCCCEEEET-
T ss_pred cccceeeeeeecccccccccEEEEEEcCCc-EEEEeCC-----CeEEEEECCCCccccceeeeccccc-CcEEEEEEEC-
Confidence 1122221 1 1122333344445 6666654 567888887765 444422111 1112222224
Q ss_pred EEEEEecCCCCCCCCeEEEEeCCCCeEEEcCCCCCCCcceEEEE--E-CCEEEEEecc
Q 007704 500 KLYALGGFDGSAMVPSIEVYDPRLGSWMSGEPMKLSRGYLGAAV--V-KEAIYVIGGV 554 (592)
Q Consensus 500 ~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~~lp~~R~~~s~~v--~-~~~Iyv~GG~ 554 (592)
..++.++ + ..+..||..+..-..... .+......++. - ++..+++++.
T Consensus 237 ~~LASa~-~-----~tIkLWd~~~~~~~~~~~-gh~~~V~~va~~~s~d~~~La~a~e 287 (588)
T 2j04_A 237 YKVVLTC-P-----GYVHKIDLKNYSISSLKT-GSLENFHIIPLNHEKESTILLMSNK 287 (588)
T ss_dssp TEEEEEC-S-----SEEEEEETTTTEEEEEEC-SCCSCCCEEEETTCSSCEEEEECSS
T ss_pred CEEEEEe-C-----CeEEEEECCCCeEEEEEc-CCCceEEEEEeeeCCCCCEEEEEcC
Confidence 4444544 1 479999998877644331 12222233333 2 3456666664
No 338
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=30.20 E-value=1.3e+02 Score=23.31 Aligned_cols=30 Identities=23% Similarity=0.213 Sum_probs=20.0
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhhhhceeec
Q 007704 281 EQTLKMKELEQKLVDAEAEIQRLKEHCLMV 310 (592)
Q Consensus 281 ~~~~~~~~l~~~~~~~~rki~~l~e~~~~l 310 (592)
..+..|..+++.+.+.+..+..++.++..+
T Consensus 37 ~kd~~I~eLEk~L~ekd~eI~~LqseLDKf 66 (72)
T 3nmd_A 37 QRDALIDELELELDQKDELIQMLQNELDKY 66 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344557777777777777777777655444
No 339
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=30.00 E-value=3.9e+02 Score=25.90 Aligned_cols=120 Identities=13% Similarity=0.087 Sum_probs=64.3
Q ss_pred CCEEEEEee-CCCCCCcceEEEEECCCCeEEECCCCC-C---CC-cceEEEEE-CCEEEEEecCCCCcccceEEEEeCCC
Q 007704 357 NGELYIFGG-GDGNSWHNTVESYSPANDEWTSRPSLN-G---TK-GSLAGATI-DNKIFAIGGGNGLECFSDVEMLDLDI 429 (592)
Q Consensus 357 ~~~Iyv~GG-~~~~~~~~~v~~yd~~t~~W~~l~~lp-~---~r-~~~~~~~~-~~~Iyv~GG~~~~~~~~~v~~yD~~t 429 (592)
++++||... +.+.. ..++.++ +.+....+... . .. .-+.++.. +++||++.-.....+...+.+||+.+
T Consensus 27 ~g~~~v~~~~~~~~~--~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~t 102 (343)
T 2qe8_A 27 DGRLFLSLHQFYQPE--MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLN 102 (343)
T ss_dssp TSCEEEEECGGGCCS--CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTT
T ss_pred CCCEEEEeCCCCCCc--eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCC
Confidence 688988753 22222 5688888 55555443211 1 11 22333333 58899985211001235799999999
Q ss_pred CeEEEccccc-----CcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCe-EEEe
Q 007704 430 GKWIRTRSML-----QKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHY-WTKI 482 (592)
Q Consensus 430 ~~W~~i~~~p-----~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~-W~~i 482 (592)
++-...-.++ ...+-..+++- ++.+|+..-.. .....+.+||+.++. |..+
T Consensus 103 g~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~--~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 103 NQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP--DDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp TEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS--GGGCEEEEEETTTCCEEEEC
T ss_pred CeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc--CCCCeEEEEECCCCCEEEEe
Confidence 8744322221 11122344444 57899974210 123578999998654 6555
No 340
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=29.97 E-value=4.6e+02 Score=26.74 Aligned_cols=73 Identities=14% Similarity=0.005 Sum_probs=39.8
Q ss_pred CCEEEEEeeCCC----CCCcceEEEEECCCCeEEECCCCCC-C------CcceEEEEEC-CEEEEEecCCCCcccceEEE
Q 007704 357 NGELYIFGGGDG----NSWHNTVESYSPANDEWTSRPSLNG-T------KGSLAGATID-NKIFAIGGGNGLECFSDVEM 424 (592)
Q Consensus 357 ~~~Iyv~GG~~~----~~~~~~v~~yd~~t~~W~~l~~lp~-~------r~~~~~~~~~-~~Iyv~GG~~~~~~~~~v~~ 424 (592)
+..+|+...... +...+.+.++|..+.+-..--..+. . +.......-+ ..+||... ...+.+.+
T Consensus 89 G~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~----~~~~~VsV 164 (386)
T 3sjl_D 89 GSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQF----SPAPAVGV 164 (386)
T ss_dssp SSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEEC----SSSCEEEE
T ss_pred CCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEc----CCCCeEEE
Confidence 456888753110 0123679999999987533211111 1 1222233334 45787642 12368999
Q ss_pred EeCCCCeEE
Q 007704 425 LDLDIGKWI 433 (592)
Q Consensus 425 yD~~t~~W~ 433 (592)
.|..+++-.
T Consensus 165 ID~~t~~vv 173 (386)
T 3sjl_D 165 VDLEGKAFK 173 (386)
T ss_dssp EETTTTEEE
T ss_pred EECCCCcEE
Confidence 999988643
No 341
>2eve_A Hypothetical protein pspto5229; alpha-beta protein, structural genomics, PSI, protein struct initiative; HET: MPO; 1.60A {Pseudomonas syringae PV} SCOP: b.122.1.8 PDB: 2g2x_A
Probab=28.89 E-value=49 Score=29.75 Aligned_cols=40 Identities=15% Similarity=0.357 Sum_probs=33.7
Q ss_pred cchhccCCCCeEEEEecC--CCeEeeEEEeccCCCccccCCCCC
Q 007704 47 LYVRKVDPGLPLFLFNYT--DRKLHGIFEAASPGMMNINPYGWT 88 (592)
Q Consensus 47 ~~v~~i~~g~~lfl~~~~--~~~l~g~~~a~s~g~~~~~~~a~~ 88 (592)
-|.+.+|+|..+|.|--. .+.+.||.|-++.+- .||.+|.
T Consensus 36 N~mr~Mk~GD~~ffYHS~c~~pgIvGi~eVv~e~y--pD~t~fd 77 (157)
T 2eve_A 36 NFLRTMAEGDEFFFYHSSCPEPGIAGIGKIVKTAY--PDPTALD 77 (157)
T ss_dssp HHHHHCCTTCEEEEEECSSSSCEEEEEEEEEEEEE--ECGGGGC
T ss_pred HHHHhcCCCCEEEEEecCCCCCEEEEEEEEeEccC--CCccccc
Confidence 677899999999999766 799999999988543 6788876
No 342
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=28.86 E-value=5.5e+02 Score=28.01 Aligned_cols=189 Identities=14% Similarity=0.082 Sum_probs=94.9
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE----CCEEEEEecCC------------CCcccc
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI----DNKIFAIGGGN------------GLECFS 420 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~----~~~Iyv~GG~~------------~~~~~~ 420 (592)
+..+||--. ..+.+.+.|+.+.+-..+-.+|....-|.++.. ++.+|+-+.+. .....+
T Consensus 101 G~~lfVnd~-----~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 101 GRFLFMNDK-----ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp EEEEEEEET-----TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred CCEEEEEcC-----CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence 445777432 236799999999886654456655556666642 46677775321 123345
Q ss_pred eEEEEeCCCCe--EEEc-cccc-------CcccceEEEEEC--------------CEEEEEecc-------CCC-CCCCe
Q 007704 421 DVEMLDLDIGK--WIRT-RSML-------QKRFALAAAELN--------------GVLYATGGY-------DGN-EYMNS 468 (592)
Q Consensus 421 ~v~~yD~~t~~--W~~i-~~~p-------~~R~~~~a~~~~--------------g~IYV~GG~-------~~~-~~~~~ 468 (592)
.+-+.|..+++ |+.. +.-| ..+..+..+.-. +.+.|+--- ++. .+.+.
T Consensus 176 ~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred eEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 78889999874 4322 1111 111111111111 112222110 111 22456
Q ss_pred eEEEeCCCCeEEE-eccCCCCCceeEEEEE-CC-EEEEEecCCCCCCCCeEEEEeCCCCe-E---------EEcCCCCCC
Q 007704 469 AERFDPREHYWTK-IANMNRRRGCHSLAVL-NG-KLYALGGFDGSAMVPSIEVYDPRLGS-W---------MSGEPMKLS 535 (592)
Q Consensus 469 v~~yD~~t~~W~~-i~~~p~~R~~~s~v~~-~~-~Lyv~GG~~~~~~~~~v~~yD~~t~~-W---------~~v~~lp~~ 535 (592)
+-+.|+++..... +...|.+..-|++..- +| .+|+.+.. .+.+.+||..+.. + ..+...+.+
T Consensus 256 V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~-----s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG 330 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKL-----SPTVTVLDVTRFDAVFYENADPRSAVVAEPELG 330 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTT-----SSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC
T ss_pred EEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCC-----CCeEEEEECcccccccccccCcccceEEEcCCC
Confidence 8888888733222 2233334444555555 44 46666543 4678999988642 1 112233333
Q ss_pred Ccc-eEEEEECCEEEEEeccc
Q 007704 536 RGY-LGAAVVKEAIYVIGGVK 555 (592)
Q Consensus 536 R~~-~s~~v~~~~Iyv~GG~~ 555 (592)
..- |.+..-++.+|+.-..+
T Consensus 331 ~gP~h~aF~~dG~aY~t~~ld 351 (595)
T 1fwx_A 331 LGPLHTAFDGRGNAYTSLFLD 351 (595)
T ss_dssp SCEEEEEECTTSEEEEEETTT
T ss_pred CCcceEEECCCCeEEEEEecC
Confidence 332 33333356777766654
No 343
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=28.52 E-value=1.8e+02 Score=22.69 Aligned_cols=54 Identities=15% Similarity=0.049 Sum_probs=38.7
Q ss_pred cccHHHHHHHHHHHHHHHHhhhhHhHHHHHHHHHHHHHHHHHHHhhhhceeecc
Q 007704 258 SSRCQSIINELIKEVAELKAFKTEQTLKMKELEQKLVDAEAEIQRLKEHCLMVQ 311 (592)
Q Consensus 258 ~~~~~~~i~~l~~e~~~l~~~~~~~~~~~~~l~~~~~~~~rki~~l~e~~~~l~ 311 (592)
..++-+.|.+|..++.-.++.+.++...+...++.+....+++..+.++...+.
T Consensus 9 ~~~le~Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~~~~ 62 (78)
T 3efg_A 9 DQELEARLVELETRLSFQEQALTELSEALADARLTGARNAELIRHLLEDLGKVR 62 (78)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 355677888888888888888888777777777778888888877777655544
No 344
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=28.23 E-value=4.9e+02 Score=26.45 Aligned_cols=115 Identities=11% Similarity=0.029 Sum_probs=57.1
Q ss_pred CEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEEc
Q 007704 358 GELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRT 435 (592)
Q Consensus 358 ~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i 435 (592)
+.+++.|+.++ .+..||..+..-... .. .......++.+ +++.++.|+.+ ..+.+||+....-..+
T Consensus 162 ~~~las~s~Dg-----~v~iwD~~~~~~~~~-~~-~~~~~v~~v~wspdg~~lasgs~d-----g~v~iwd~~~~~~~~~ 229 (434)
T 2oit_A 162 PSMVAVCLADG-----SIAVLQVTETVKVCA-TL-PSTVAVTSVCWSPKGKQLAVGKQN-----GTVVQYLPTLQEKKVI 229 (434)
T ss_dssp TTEEEEEETTS-----CEEEEEESSSEEEEE-EE-CGGGCEEEEEECTTSSCEEEEETT-----SCEEEECTTCCEEEEE
T ss_pred CCEEEEEECCC-----eEEEEEcCCCcceee-cc-CCCCceeEEEEcCCCCEEEEEcCC-----CcEEEEccCCcccccc
Confidence 56777777663 578888877632211 01 11222233333 67777888754 3688899873322222
Q ss_pred ccccC--c---ccceEEEEECCEEEEEe--ccCCC-CCCCeeEEEeCCCC------eEEEecc
Q 007704 436 RSMLQ--K---RFALAAAELNGVLYATG--GYDGN-EYMNSAERFDPREH------YWTKIAN 484 (592)
Q Consensus 436 ~~~p~--~---R~~~~a~~~~g~IYV~G--G~~~~-~~~~~v~~yD~~t~------~W~~i~~ 484 (592)
..... . ....+.....+..|+++ ..++. .....+.+||+... .|+....
T Consensus 230 ~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~ 292 (434)
T 2oit_A 230 PCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFME 292 (434)
T ss_dssp CCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCC
T ss_pred cCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEeccc
Confidence 21111 1 01222233344444432 22222 33456888887643 5776643
No 345
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=27.99 E-value=4.8e+02 Score=26.69 Aligned_cols=141 Identities=16% Similarity=0.126 Sum_probs=72.8
Q ss_pred CEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEE--CCEEEEEeccCCCCCCCeeEEEeCCCCe-E-E
Q 007704 405 NKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAEL--NGVLYATGGYDGNEYMNSAERFDPREHY-W-T 480 (592)
Q Consensus 405 ~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~--~g~IYV~GG~~~~~~~~~v~~yD~~t~~-W-~ 480 (592)
+.||+.-.. ..+.++|+.+++.+.+.. .. .......+ ++.||+..-.. ......+..++..... + .
T Consensus 153 g~Lyv~D~~------~~I~~id~~~g~v~~~~~-~~--~~P~giavd~dG~lyVad~~~-~~~~~gv~~~~~~~~~~~~~ 222 (433)
T 4hw6_A 153 DDLYWVGQR------DAFRHVDFVNQYVDIKTT-NI--GQCADVNFTLNGDMVVVDDQS-SDTNTGIYLFTRASGFTERL 222 (433)
T ss_dssp CEEEEECBT------SCEEEEETTTTEEEEECC-CC--SCEEEEEECTTCCEEEEECCS-CTTSEEEEEECGGGTTCCEE
T ss_pred CEEEEEeCC------CCEEEEECCCCEEEEeec-CC--CCccEEEECCCCCEEEEcCCC-CcccceEEEEECCCCeeccc
Confidence 789998432 689999999888876643 11 11222222 55688875322 1112345566553221 1 1
Q ss_pred EeccCCCCCceeEEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCeE-EEcC-CCCCCCcceEEEEE-C-CEEEEEecc
Q 007704 481 KIANMNRRRGCHSLAVL--NGKLYALGGFDGSAMVPSIEVYDPRLGSW-MSGE-PMKLSRGYLGAAVV-K-EAIYVIGGV 554 (592)
Q Consensus 481 ~i~~~p~~R~~~s~v~~--~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W-~~v~-~lp~~R~~~s~~v~-~-~~Iyv~GG~ 554 (592)
.++.+..+ ..+++. ++.||+.... ...+++||+.+... +.+. ....+. ...+++- + +.||+.--.
T Consensus 223 ~~~~~~~P---~giavd~~~G~lyv~d~~-----~~~V~~~d~~~g~~~~~~~~~~~~~~-~~~ia~dpdG~~LYvad~~ 293 (433)
T 4hw6_A 223 SLCNARGA---KTCAVHPQNGKIYYTRYH-----HAMISSYDPATGTLTEEEVMMDTKGS-NFHIVWHPTGDWAYIIYNG 293 (433)
T ss_dssp EEEECSSB---CCCEECTTTCCEEECBTT-----CSEEEEECTTTCCEEEEEEECSCCSS-CEEEEECTTSSEEEEEETT
T ss_pred cccccCCC---CEEEEeCCCCeEEEEECC-----CCEEEEEECCCCeEEEEEeccCCCCC-cccEEEeCCCCEEEEEeCC
Confidence 22322222 223333 6788886432 34699999986655 3321 111111 1233333 3 458886532
Q ss_pred cCCCccccEEEEEcCC
Q 007704 555 KNGSEIVDTVERFKEG 570 (592)
Q Consensus 555 ~~~~~~~~~v~~Yd~~ 570 (592)
+ +.|++++..
T Consensus 294 ~------~~I~~~~~d 303 (433)
T 4hw6_A 294 K------HCIYRVDYN 303 (433)
T ss_dssp T------TEEEEEEBC
T ss_pred C------CEEEEEeCC
Confidence 2 568886643
No 346
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=27.93 E-value=1.5e+02 Score=30.24 Aligned_cols=17 Identities=41% Similarity=0.651 Sum_probs=12.6
Q ss_pred ceeEEEEE-CCEEEEEec
Q 007704 490 GCHSLAVL-NGKLYALGG 506 (592)
Q Consensus 490 ~~~s~v~~-~~~Lyv~GG 506 (592)
..|+++.. ++++|.+|-
T Consensus 286 ~~hs~alt~~G~v~~wG~ 303 (406)
T 4d9s_A 286 WRHTMALTSDGKLYGWGW 303 (406)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred CCEEEEEcCCCeEEEeeC
Confidence 34666666 789999984
No 347
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=26.73 E-value=5.6e+02 Score=27.93 Aligned_cols=72 Identities=8% Similarity=-0.008 Sum_probs=39.2
Q ss_pred CCEEEEEeeCCC----CCCcceEEEEECCCCeEEECCCCCCCCcceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeE
Q 007704 357 NGELYIFGGGDG----NSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKW 432 (592)
Q Consensus 357 ~~~Iyv~GG~~~----~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W 432 (592)
+++.++++..+. .....+++.||..+++...+...+. .......+-+|+.++++. -+++++.|..+++-
T Consensus 72 dg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~-~~~~~~~SPdG~~la~~~------~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 72 DGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPN-NTQWVTWSPVGHKLAYVW------NNDIYVKIEPNLPS 144 (740)
T ss_dssp TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCT-TEEEEEECSSTTCEEEEE------TTEEEEESSTTSCC
T ss_pred CCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCC-cceeeEECCCCCEEEEEE------CCeEEEEECCCCce
Confidence 566556655332 1223678999999998766644322 111222223555444442 14677777776654
Q ss_pred EEc
Q 007704 433 IRT 435 (592)
Q Consensus 433 ~~i 435 (592)
.++
T Consensus 145 ~~l 147 (740)
T 4a5s_A 145 YRI 147 (740)
T ss_dssp EEC
T ss_pred EEE
Confidence 444
No 348
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=26.51 E-value=7e+02 Score=27.69 Aligned_cols=205 Identities=14% Similarity=0.134 Sum_probs=104.7
Q ss_pred CEEEEEeeCC-CCCCcceEEEEECCCCeEEECCC-CC-----CCCcc-eEEEEE---CCEEEEEecCCCCcccceEEEEe
Q 007704 358 GELYIFGGGD-GNSWHNTVESYSPANDEWTSRPS-LN-----GTKGS-LAGATI---DNKIFAIGGGNGLECFSDVEMLD 426 (592)
Q Consensus 358 ~~Iyv~GG~~-~~~~~~~v~~yd~~t~~W~~l~~-lp-----~~r~~-~~~~~~---~~~Iyv~GG~~~~~~~~~v~~yD 426 (592)
+.+|+..|.. .......+++=.-.-.+|+.+.. .+ ..|.. +.+++. .+.+|+.+. ...+++=+
T Consensus 88 ~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~------~~~l~~S~ 161 (763)
T 3a0f_A 88 DRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSR------TQGLWRST 161 (763)
T ss_dssp TCEEEEECSCTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECS------SSCEEEES
T ss_pred CEEEEEecccccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeC------CCcEEEEC
Confidence 6788876521 11122345555555678988742 11 11221 234443 366777642 12344333
Q ss_pred CCCCeEEEcccccCcc---cceEEEEE----CCEEEEEeccCCCCCCCeeEEEeCCCCeEEEeccCC-------------
Q 007704 427 LDIGKWIRTRSMLQKR---FALAAAEL----NGVLYATGGYDGNEYMNSAERFDPREHYWTKIANMN------------- 486 (592)
Q Consensus 427 ~~t~~W~~i~~~p~~R---~~~~a~~~----~g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p------------- 486 (592)
=.-.+|+++..++... .......+ .+.+|+.....+ .+++=+=.-.+|+.+...+
T Consensus 162 DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g-----~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p 236 (763)
T 3a0f_A 162 DRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAVG-----GLWVTWDGGANWSQVGGQPTQWSDWTKSIVAA 236 (763)
T ss_dssp STTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESSTT-----CEEEESSSSSSCEECTTCCCSCCHHHHHHHHH
T ss_pred CCCcCccccccCcccCCCccceEEEEECCCCCCEEEEEEeCCC-----eEEEECCCCCCccccCCCcccccccccccccc
Confidence 3456899987666432 22223233 346777643211 2333322345799987544
Q ss_pred -------CCCceeEEEEE-CCEEEEEecCCC---CCCCCeEEEEeCCCCeEEEcCCCCCCCc--------------ceEE
Q 007704 487 -------RRRGCHSLAVL-NGKLYALGGFDG---SAMVPSIEVYDPRLGSWMSGEPMKLSRG--------------YLGA 541 (592)
Q Consensus 487 -------~~R~~~s~v~~-~~~Lyv~GG~~~---~~~~~~v~~yD~~t~~W~~v~~lp~~R~--------------~~s~ 541 (592)
.+...+.++.. ++.||+...... ......+++.+-...+|+.+.+.+..-. .+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~g~v~rS~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~~gg~~~ 316 (763)
T 3a0f_A 237 SGTAIQSSGPLPIKIALGKNGRLYITYSDAPGPWGVLYGEVWSYDPTNGNWKHITPSREGANTYPAPTGNKKVVPGGWNG 316 (763)
T ss_dssp HCCCCSSSSCEEEEEEECTTSCEEEEEESSCSSSCCCCEEEEEEETTTTEEEECCTTSSSSCEESCCCCCTTSCCCEEEE
T ss_pred ccccccCCCCcceeEEECCCCcEEEEeccCCCCCCCcceeEEEEeCCCCceEECCCCCCCCccccccccccccccCCcee
Confidence 22333444433 678888742100 0123478899888899999876553111 2223
Q ss_pred EEE--CCEEEEEecccCCCccccEEEEEcCC-CcEEEc
Q 007704 542 AVV--KEAIYVIGGVKNGSEIVDTVERFKEG-QGWEEI 576 (592)
Q Consensus 542 ~v~--~~~Iyv~GG~~~~~~~~~~v~~Yd~~-~~W~~v 576 (592)
+.+ .+.||+.+.... ....+++=.-. .+|+.+
T Consensus 317 i~v~~~~~v~~~~~~~~---~~~~l~~S~DgG~tW~~~ 351 (763)
T 3a0f_A 317 ISVGNGDTVVVSTLDAN---GEDSVYLSRDAGNSWKDL 351 (763)
T ss_dssp EEECSTBCEEEEEESCT---TSCCEEEESBTTSSEEEH
T ss_pred EEEcCCCeEEEEecCCC---CCCCEEEECCCCCCcccC
Confidence 333 355777654211 11335554444 889988
No 349
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=25.85 E-value=1.3e+02 Score=18.82 Aligned_cols=25 Identities=28% Similarity=0.340 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHhhhhHhHHHHHHH
Q 007704 265 INELIKEVAELKAFKTEQTLKMKEL 289 (592)
Q Consensus 265 i~~l~~e~~~l~~~~~~~~~~~~~l 289 (592)
|..|..|+.++.+....+.-+|..+
T Consensus 4 iaalkqeiaalkkeiaalkfeiaal 28 (33)
T 4dzn_A 4 IAALKQEIAALKKEIAALKFEIAAL 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555544444433444443
No 350
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=25.70 E-value=78 Score=30.85 Aligned_cols=56 Identities=14% Similarity=-0.079 Sum_probs=28.9
Q ss_pred ceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEEECCEEEEEecc
Q 007704 397 SLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAELNGVLYATGGY 460 (592)
Q Consensus 397 ~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~~~g~IYV~GG~ 460 (592)
.|+++..++++|..|-....+.-... ........+. .-..|+++.-++.+|.+|-.
T Consensus 151 ~~~~~l~~G~v~~wG~n~~gqlg~p~----~~~~~v~~i~----~G~~hs~al~~G~v~~wG~n 206 (282)
T 3qhy_B 151 YTALAVKNGGVIAWGDNYFGQTTVPA----EAQSGVDDVA----GGIFHSLALKDGKVIAWGDN 206 (282)
T ss_dssp SEEEEEETTEEEEEECCTTSTTSCCG----GGGSSEEEEE----ECSSEEEEEETTEEEEEECC
T ss_pred CEEEEEECCEEEEecCCCCCCCCCce----ecCCCeEEEE----ecCCEEEEEECCeEEEEECC
Confidence 45666558999999864322211000 0001122211 12345555578999999853
No 351
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=25.11 E-value=3.4e+02 Score=32.05 Aligned_cols=174 Identities=13% Similarity=0.079 Sum_probs=93.7
Q ss_pred ceEEEEECCEEEEEecCCCCcccceEEEEeCCCCeE-EEcc----cccCcccceEEEEE---CCEEEEEeccCCCCCCCe
Q 007704 397 SLAGATIDNKIFAIGGGNGLECFSDVEMLDLDIGKW-IRTR----SMLQKRFALAAAEL---NGVLYATGGYDGNEYMNS 468 (592)
Q Consensus 397 ~~~~~~~~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W-~~i~----~~p~~R~~~~a~~~---~g~IYV~GG~~~~~~~~~ 468 (592)
++++....+.+ ++|.-....+.-.+++|......| .... .+.....++++++- ++..||+|-- .......
T Consensus 336 GfSa~~t~d~~-~~GapG~~~w~G~v~~~~~~~~~~~~~~~~~~~~~~~sylGySVa~~~~~g~~~~v~GAP-~~~~~G~ 413 (1095)
T 3k6s_A 336 GFSAVFTPDGP-VLGAVGSFTWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAP-RYQHTGK 413 (1095)
T ss_dssp TSSEECCTTCC-EEEESCSTTTTBEEEECCSSSCCEEECCCSSCCCCCSCCBTSSEECCCCSSSCEEEEEET-TGGGTCE
T ss_pred cccceecCCcc-eEcccccCCccceeEEecCCCcceeeccccccccccccccceeeEEeccCCceEEEEEcc-cccccce
Confidence 44455444444 787655555566788888765443 3221 12233345665542 2345666632 2223457
Q ss_pred eEEEeCCCCeEEEecc----CCCCCceeEEEEEC------CEEEEEecCC--CCCCCCeEEEEeCCC--CeEEEcCCC--
Q 007704 469 AERFDPREHYWTKIAN----MNRRRGCHSLAVLN------GKLYALGGFD--GSAMVPSIEVYDPRL--GSWMSGEPM-- 532 (592)
Q Consensus 469 v~~yD~~t~~W~~i~~----~p~~R~~~s~v~~~------~~Lyv~GG~~--~~~~~~~v~~yD~~t--~~W~~v~~l-- 532 (592)
+++|....+.|..... .....+++++++.+ ..|+++|.-. .......+++|.... ..|.....+
T Consensus 414 V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~~~~~~~~~~l~g 493 (1095)
T 3k6s_A 414 AVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAVLYG 493 (1095)
T ss_dssp EEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSSTTCCCSCSSCCC
T ss_pred EEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCCCcceeeeEEeec
Confidence 8899888778876532 23446667777652 3477777421 112234688886543 457643222
Q ss_pred ----CCCCcceEEEEECC-------EEEEEecccCCCccccEEEEEcCC-C-cEE
Q 007704 533 ----KLSRGYLGAAVVKE-------AIYVIGGVKNGSEIVDTVERFKEG-Q-GWE 574 (592)
Q Consensus 533 ----p~~R~~~s~~v~~~-------~Iyv~GG~~~~~~~~~~v~~Yd~~-~-~W~ 574 (592)
+..|.+.+++.++| .| ++|....+ .....||+|.-. . .|.
T Consensus 494 ~~~~~~~~FG~sva~~gD~NgDG~~Dl-~VGAP~~~-~~~G~vyi~~g~~~~g~~ 546 (1095)
T 3k6s_A 494 EQGHPWGRFGAALTVLGDVNGDKLTDV-VIGAPGEE-ENRGAVYLFHGVLGPSIS 546 (1095)
T ss_dssp CCSCSSCCBTSCEEEEECSSSSSCCEE-EEECTTTT-TSCCBEEEEEBCSSSCBC
T ss_pred ccCCccccCccceEeecccCCCCCcCE-EEeCCcCC-CCCCEEEEecCCCCCCcc
Confidence 34577777776521 25 44543221 234668988876 5 563
No 352
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=24.52 E-value=4.9e+02 Score=25.23 Aligned_cols=104 Identities=16% Similarity=0.063 Sum_probs=50.1
Q ss_pred ceEEEEeCC-CCeEEEcccccCc--ccceEEEEE--CC-EEEEEeccCCCCCCCeeEE--EeCCCCeEE----EeccCCC
Q 007704 420 SDVEMLDLD-IGKWIRTRSMLQK--RFALAAAEL--NG-VLYATGGYDGNEYMNSAER--FDPREHYWT----KIANMNR 487 (592)
Q Consensus 420 ~~v~~yD~~-t~~W~~i~~~p~~--R~~~~a~~~--~g-~IYV~GG~~~~~~~~~v~~--yD~~t~~W~----~i~~~p~ 487 (592)
..+++||.. +++...+.....+ -.+.....+ ++ .+|+.+..+ +.+.+ +|+.++... .+..++.
T Consensus 167 ~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~-----~~v~v~~~~~~~g~~~~~~~~~~~~~~ 241 (365)
T 1jof_A 167 NKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG-----NRICEYVIDPATHMPVYTHHSFPLIPP 241 (365)
T ss_dssp TEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTT-----TEEEEEEECTTTCCEEEEEEEEESSCT
T ss_pred CEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCC-----CeEEEEEEeCCCCcEEEccceEEcCCC
Confidence 578999988 7776554332211 122222233 44 677765322 34445 455566543 3444443
Q ss_pred CC---c-------eeEEEE-E--CC-EEEEEecCCCCCCCCeEEEEeCC-CCeEEE
Q 007704 488 RR---G-------CHSLAV-L--NG-KLYALGGFDGSAMVPSIEVYDPR-LGSWMS 528 (592)
Q Consensus 488 ~R---~-------~~s~v~-~--~~-~Lyv~GG~~~~~~~~~v~~yD~~-t~~W~~ 528 (592)
.. . ....+. + ++ .||+............+.+|+.. +.+.+.
T Consensus 242 ~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~ 297 (365)
T 1jof_A 242 GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEK 297 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEE
T ss_pred CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEE
Confidence 21 1 233344 4 45 56654321111122368888875 555554
No 353
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=24.05 E-value=7.1e+02 Score=26.94 Aligned_cols=70 Identities=14% Similarity=0.170 Sum_probs=41.6
Q ss_pred EEEEeccCCCCCCCeeEEEeCCC-----CeEEEe----ccCCCCCceeEEEEE-C-CEEEEEe-cCCCCCCCCeEEEEeC
Q 007704 454 LYATGGYDGNEYMNSAERFDPRE-----HYWTKI----ANMNRRRGCHSLAVL-N-GKLYALG-GFDGSAMVPSIEVYDP 521 (592)
Q Consensus 454 IYV~GG~~~~~~~~~v~~yD~~t-----~~W~~i----~~~p~~R~~~s~v~~-~-~~Lyv~G-G~~~~~~~~~v~~yD~ 521 (592)
.+++||..... ..++.+|... -.|+.- +.|........++.+ + .-+.||| |++.......++++|.
T Consensus 153 tvLvggmg~GG--~~~yALDVT~P~~p~~LWe~~~~~~~~LG~t~s~P~I~~~~~g~w~~vfG~GY~~~~~~~~Lyv~d~ 230 (570)
T 3hx6_A 153 TVLIGSLRAGG--KGLFALDVTDPANIKLLWEIGVDQEPDLGYSFPKPTVARLHNGKWAVVTGNGYSSMNDKAALLIIDM 230 (570)
T ss_dssp EEEEEECTTSC--SEEEEEECSSGGGCEEEEEEETTTCTTCCBCCSCCEEEECTTSSEEEEEECCBSCTTCCEEEEEEET
T ss_pred EEEEEecCCCC--cEEEEEECCCCCCCceeEEECCCCccccCccccCCEEEEecCCCEEEEEccccCCCCCccEEEEEEC
Confidence 45666643222 4567777654 347764 334455555566665 2 3455555 6665545568999999
Q ss_pred CCCe
Q 007704 522 RLGS 525 (592)
Q Consensus 522 ~t~~ 525 (592)
.+..
T Consensus 231 ~tG~ 234 (570)
T 3hx6_A 231 ETGA 234 (570)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 9875
No 354
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=23.94 E-value=7.2e+02 Score=26.94 Aligned_cols=175 Identities=14% Similarity=0.029 Sum_probs=100.3
Q ss_pred cceEEEEE--CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEE--ECCEEEEEecCCCCcccceEEE
Q 007704 349 SYASAAML--NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGAT--IDNKIFAIGGGNGLECFSDVEM 424 (592)
Q Consensus 349 ~~~s~v~~--~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~--~~~~Iyv~GG~~~~~~~~~v~~ 424 (592)
.-.++... ++.||+.--. ...++++++.......+..... ..-..+++ .+++||+.-.. ...+++
T Consensus 38 ~~~~l~~d~~~~~lywtD~~-----~~~I~r~~~~g~~~~~v~~~g~-~~P~GlAvD~~~~~LY~tD~~-----~~~I~v 106 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDIS-----LKTISRAFMNGSALEHVVEFGL-DYPEGMAVDWLGKNLYWADTG-----TNRIEV 106 (628)
T ss_dssp CEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSC-SCCCEEEEETTTTEEEEEETT-----TTEEEE
T ss_pred ceEEEEEECCCCEEEEEECC-----CCeEEEEECCCCCcEEEEeCCC-CCcceEEEEeCCCEEEEEECC-----CCEEEE
Confidence 33444444 6889998543 2568889887765544422111 11123444 47899998542 357899
Q ss_pred EeCCCCeEEEc--ccccCcccceEEEEE--CCEEEEEe-ccCCCCCCCeeEEEeCCCCeEEEeccCCCCCceeEEEEE--
Q 007704 425 LDLDIGKWIRT--RSMLQKRFALAAAEL--NGVLYATG-GYDGNEYMNSAERFDPREHYWTKIANMNRRRGCHSLAVL-- 497 (592)
Q Consensus 425 yD~~t~~W~~i--~~~p~~R~~~~a~~~--~g~IYV~G-G~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~s~v~~-- 497 (592)
+++....-+.+ ..+..|+ ..++- +|.||+.- |. ...+++.++....-+.+.. .......+.+
T Consensus 107 ~~~dG~~~~~l~~~~l~~P~---~iavdp~~G~lY~tD~g~-----~~~I~r~~~dG~~~~~l~~---~~~~P~GlalD~ 175 (628)
T 4a0p_A 107 SKLDGQHRQVLVWKDLDSPR---ALALDPAEGFMYWTEWGG-----KPKIDRAAMDGSERTTLVP---NVGRANGLTIDY 175 (628)
T ss_dssp EETTSTTCEEEECSSCCCEE---EEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEEEEC---SCSSEEEEEEET
T ss_pred EecCCCcEEEEEeCCCCCcc---cEEEccCCCeEEEeCCCC-----CCEEEEEeCCCCceEEEEC---CCCCcceEEEcc
Confidence 99875432222 2333332 33333 68999975 21 3578999988765554432 1112223333
Q ss_pred -CCEEEEEecCCCCCCCCeEEEEeCCCCeEEEcC-CCCCCCcceEEEEECCEEEEEec
Q 007704 498 -NGKLYALGGFDGSAMVPSIEVYDPRLGSWMSGE-PMKLSRGYLGAAVVKEAIYVIGG 553 (592)
Q Consensus 498 -~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~v~-~lp~~R~~~s~~v~~~~Iyv~GG 553 (592)
+++||+.-.. .+.|+.+|+....=+.+. .++. .+++++.++.||+.--
T Consensus 176 ~~~~LY~aD~~-----~~~I~~~d~dG~~~~v~~~~l~~---P~glav~~~~ly~tD~ 225 (628)
T 4a0p_A 176 AKRRLYWTDLD-----TNLIESSNMLGLNREVIADDLPH---PFGLTQYQDYIYWTDW 225 (628)
T ss_dssp TTTEEEEEETT-----TTEEEEEETTSCSCEEEEECCSC---EEEEEEETTEEEEEET
T ss_pred ccCEEEEEECC-----CCEEEEEcCCCCceEEeeccCCC---ceEEEEECCEEEEecC
Confidence 6899998542 467999998653223332 3333 3577788889998753
No 355
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=23.93 E-value=1.7e+02 Score=20.09 Aligned_cols=30 Identities=20% Similarity=0.230 Sum_probs=17.2
Q ss_pred HHHHHHHHHHhhhhHhHHHHHHHHHHHHHH
Q 007704 267 ELIKEVAELKAFKTEQTLKMKELEQKLVDA 296 (592)
Q Consensus 267 ~l~~e~~~l~~~~~~~~~~~~~l~~~~~~~ 296 (592)
+|..+++++.+.+.+..++|..+++++.+.
T Consensus 6 ~l~qkI~kVdrEI~Kte~kI~~lqkKlkeL 35 (42)
T 2l5g_B 6 ELIQNMDRVDREITMVEQQISKLKKKQQQL 35 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566666665555555666555555544
No 356
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=23.43 E-value=25 Score=37.58 Aligned_cols=103 Identities=15% Similarity=0.121 Sum_probs=0.0
Q ss_pred cchhhH--HHHHHHHhhhhcccccCCCCCccccccCCCCccccccccccCCcccccc--ccccccHHHHHHHHHHHHHHH
Q 007704 200 DQDEKS--LILMALKELAINHEHQDFSSTDYENELATGGDRHCSFIGEQMSSEEKIE--TCSSSRCQSIINELIKEVAEL 275 (592)
Q Consensus 200 ~~~e~~--~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~l~~e~~~l 275 (592)
+..|++ .++.+|+.+.-+-++.-.+.........+ .--+.+....++++ .....+|...|..|.+++...
T Consensus 56 dkqErDltkrINELKnqLEdlsKnsKdseqy~k~~~E------~Lr~rq~q~~dNdNtynE~S~ELRRrIqyLKekVdnQ 129 (562)
T 3ghg_A 56 DEVNQDFTNRINKLKNSLFEYQKNNKDSHSLTTNIME------ILRGDFSSANNRDNTYNRVSEDLRSRIEVLKRKVIEK 129 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH------TTSSHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred HhhcCcHHHHHHHHHHHHHHHHhhchhHHHHHHHHHH------HHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HhhhhHhHHHHHHHHHHHHHHHHHHHhhhhcee
Q 007704 276 KAFKTEQTLKMKELEQKLVDAEAEIQRLKEHCL 308 (592)
Q Consensus 276 ~~~~~~~~~~~~~l~~~~~~~~rki~~l~e~~~ 308 (592)
.+.+..++..+..+..++..++..|....+.|+
T Consensus 130 lsnIrvLQsnLedq~~kIQRLEvDIdiqirsCK 162 (562)
T 3ghg_A 130 VQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCR 162 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
No 357
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=23.26 E-value=1.1e+02 Score=26.71 Aligned_cols=48 Identities=17% Similarity=0.211 Sum_probs=24.8
Q ss_pred ccHHHHHHHHHHHHHHHHhhhhHhHHHHHHHHHHHHHHHHHHHhhhhc
Q 007704 259 SRCQSIINELIKEVAELKAFKTEQTLKMKELEQKLVDAEAEIQRLKEH 306 (592)
Q Consensus 259 ~~~~~~i~~l~~e~~~l~~~~~~~~~~~~~l~~~~~~~~rki~~l~e~ 306 (592)
..+.+.+.++.+|+..+.+.......++..+.+......+++..++++
T Consensus 78 ~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~ 125 (138)
T 3hnw_A 78 DSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKN 125 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555555555555555555555555555555555554443
No 358
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=22.88 E-value=4.2e+02 Score=28.91 Aligned_cols=166 Identities=11% Similarity=0.101 Sum_probs=88.6
Q ss_pred CCcceEEEEE------CCEEEEEecCCCCcccceEEEEeCCCCeEEEcccccCcccceEEEE----ECCEEEEEeccCC-
Q 007704 394 TKGSLAGATI------DNKIFAIGGGNGLECFSDVEMLDLDIGKWIRTRSMLQKRFALAAAE----LNGVLYATGGYDG- 462 (592)
Q Consensus 394 ~r~~~~~~~~------~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~i~~~p~~R~~~~a~~----~~g~IYV~GG~~~- 462 (592)
.-.+|-..+. +..+||--. ....+.+.|+.+.+-..+-.+|....-|.++. -.+++|+-+-+..
T Consensus 85 gd~hh~~~s~t~g~~DG~~lfVnd~-----~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p 159 (595)
T 1fwx_A 85 GDLHHVHMSFTEGKYDGRFLFMNDK-----ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETP 159 (595)
T ss_dssp CCBCCEEEEEETTEEEEEEEEEEET-----TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEE
T ss_pred CCCCccccCCCCCCcCCCEEEEEcC-----CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccc
Confidence 3344544444 345777532 23579999999998766546666555566664 3567887764311
Q ss_pred -----------CCCCCeeEEEeCCCCe--EEEec-cCC-------CCCceeEEEEEC--------------CEEEEEecC
Q 007704 463 -----------NEYMNSAERFDPREHY--WTKIA-NMN-------RRRGCHSLAVLN--------------GKLYALGGF 507 (592)
Q Consensus 463 -----------~~~~~~v~~yD~~t~~--W~~i~-~~p-------~~R~~~s~v~~~--------------~~Lyv~GG~ 507 (592)
+.+.+.+-+.|.++.+ |+-.- .-| ..+..+..+.-. +.+.++---
T Consensus 160 ~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~ 239 (595)
T 1fwx_A 160 LVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIA 239 (595)
T ss_dssp SSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHH
T ss_pred cCCCCcccccccccCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeecc
Confidence 2445678889999875 55331 111 112111111111 112222110
Q ss_pred -------CC-CCCCCeEEEEeCCCCeEEE-cCCCCCCCcceEEEEE-CC-EEEEEecccCCCccccEEEEEcCC
Q 007704 508 -------DG-SAMVPSIEVYDPRLGSWMS-GEPMKLSRGYLGAAVV-KE-AIYVIGGVKNGSEIVDTVERFKEG 570 (592)
Q Consensus 508 -------~~-~~~~~~v~~yD~~t~~W~~-v~~lp~~R~~~s~~v~-~~-~Iyv~GG~~~~~~~~~~v~~Yd~~ 570 (592)
++ ....+.+.+.|+.+...+. +...|.+...|++.+- ++ .+|+.+... +.|.+||..
T Consensus 240 ~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s------~~VsVid~~ 307 (595)
T 1fwx_A 240 EIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLS------PTVTVLDVT 307 (595)
T ss_dssp HHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTS------SBEEEEEGG
T ss_pred ceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCC------CeEEEEECc
Confidence 01 1223568889988733222 2233444555777666 44 466665543 568899875
No 359
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=22.58 E-value=1.3e+02 Score=30.85 Aligned_cols=50 Identities=18% Similarity=0.278 Sum_probs=29.4
Q ss_pred cccHHHHHHHHHHHHHHHHhhhhHhHHHHHHHHHHHHHHHHHHHhhhhce
Q 007704 258 SSRCQSIINELIKEVAELKAFKTEQTLKMKELEQKLVDAEAEIQRLKEHC 307 (592)
Q Consensus 258 ~~~~~~~i~~l~~e~~~l~~~~~~~~~~~~~l~~~~~~~~rki~~l~e~~ 307 (592)
++-+-+...+|.+++.-|.+++..+...|..|+..++....+++.|+..+
T Consensus 108 dn~~~e~s~eLe~~i~~lk~~V~~q~~~ir~Lq~~l~~q~~kiqRLE~~I 157 (390)
T 1deq_A 108 DNTFKQINEDLRSRIEILRRKVIEQVQRINLLQKNVRDQLVDMKRLEVDI 157 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555556666666666666655666666666666666666655443
No 360
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=22.14 E-value=44 Score=34.23 Aligned_cols=64 Identities=13% Similarity=0.034 Sum_probs=42.4
Q ss_pred cCCcccccc--ccccccHHHHHHHHHHHHHHHHhhhhHhHHHHHHHHHHHHHHHHHHHhhhhceee
Q 007704 246 QMSSEEKIE--TCSSSRCQSIINELIKEVAELKAFKTEQTLKMKELEQKLVDAEAEIQRLKEHCLM 309 (592)
Q Consensus 246 ~~~~~~~~~--~~~~~~~~~~i~~l~~e~~~l~~~~~~~~~~~~~l~~~~~~~~rki~~l~e~~~~ 309 (592)
+...++++. .....+|.+.|.-|++++..-...+..+...+..+..++..++.+|..+..-|.-
T Consensus 101 ~~q~~dndn~~~e~s~eLe~~i~~lk~~V~~q~~~ir~Lq~~l~~q~~kiqRLE~~Id~c~~~C~~ 166 (390)
T 1deq_A 101 FAKANNNDNTFKQINEDLRSRIEILRRKVIEQVQRINLLQKNVRDQLVDMKRLEVDIDIKIRSCKG 166 (390)
T ss_pred HHhhccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 344555555 5556788888888888887766666666666777777777777777665554443
No 361
>3ra3_A P1C; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=21.88 E-value=74 Score=19.15 Aligned_cols=21 Identities=19% Similarity=0.029 Sum_probs=9.6
Q ss_pred HHHHHHHHHhhhhHhHHHHHH
Q 007704 268 LIKEVAELKAFKTEQTLKMKE 288 (592)
Q Consensus 268 l~~e~~~l~~~~~~~~~~~~~ 288 (592)
|.-|.+++++++..+.++|.+
T Consensus 5 lefendaleqkiaalkqkias 25 (28)
T 3ra3_A 5 LEFENDALEQKIAALKQKIAS 25 (28)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHHHH
Confidence 334444555444444444443
No 362
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=21.72 E-value=9e+02 Score=27.29 Aligned_cols=148 Identities=11% Similarity=0.009 Sum_probs=78.3
Q ss_pred CCEEEEEeeCCCCCCcceEEEEECCCCeEEECCCCCCCCcceEEEEE--CCEEEEEecCCCCcccceEEEEeCCCCeEEE
Q 007704 357 NGELYIFGGGDGNSWHNTVESYSPANDEWTSRPSLNGTKGSLAGATI--DNKIFAIGGGNGLECFSDVEMLDLDIGKWIR 434 (592)
Q Consensus 357 ~~~Iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (592)
.+++++.|+.+ +.+..+|..+.+.... +..+ ....++.+ +++.++.|+.+ ..+.+||..+.+-..
T Consensus 68 pg~~L~S~s~D-----~~v~lWd~~~~~~~~~--~~~~-~~V~~v~~sp~g~~l~sgs~d-----g~V~lwd~~~~~~~~ 134 (902)
T 2oaj_A 68 KGIYLVVINAK-----DTVYVLSLYSQKVLTT--VFVP-GKITSIDTDASLDWMLIGLQN-----GSMIVYDIDRDQLSS 134 (902)
T ss_dssp TTTEEEEEETT-----CEEEEEETTTCSEEEE--EECS-SCEEEEECCTTCSEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCCEEEEEECc-----CeEEEEECCCCcEEEE--EcCC-CCEEEEEECCCCCEEEEEcCC-----CcEEEEECCCCcccc
Confidence 35555666644 4688889887654221 1111 11222222 56777777654 468889998876431
Q ss_pred c--cc------ccCcc--cceEEEEEC--CEEEEEeccCCCCCCCeeEEEeCCCCeEEEe-c-cC----CC---------
Q 007704 435 T--RS------MLQKR--FALAAAELN--GVLYATGGYDGNEYMNSAERFDPREHYWTKI-A-NM----NR--------- 487 (592)
Q Consensus 435 i--~~------~p~~R--~~~~a~~~~--g~IYV~GG~~~~~~~~~v~~yD~~t~~W~~i-~-~~----p~--------- 487 (592)
. +. .+..+ .-.+++..- +.+++.|+.+ ..+ +||+.++.-... . .. +.
T Consensus 135 ~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~d-----g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 208 (902)
T 2oaj_A 135 FKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEY-----VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNE 208 (902)
T ss_dssp EEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSS-----CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTS
T ss_pred ceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCC-----CcE-EEECCCCceEEEEecccCCcCCCccccccccc
Confidence 1 00 01111 112233332 3566666544 357 999988764432 1 10 00
Q ss_pred C-CceeEEEEE--CCEEEEEecCCCCCCCCeEEEEeCCCCeEEE
Q 007704 488 R-RGCHSLAVL--NGKLYALGGFDGSAMVPSIEVYDPRLGSWMS 528 (592)
Q Consensus 488 ~-R~~~s~v~~--~~~Lyv~GG~~~~~~~~~v~~yD~~t~~W~~ 528 (592)
. ...-..+.+ ++..++.|+.++ .+.+||..+.+-..
T Consensus 209 ~h~~~V~~v~fspdg~~lasgs~Dg-----~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 209 KRTPKVIQSLYHPNSLHIITIHEDN-----SLVFWDANSGHMIM 247 (902)
T ss_dssp CBCCCEEEEEECTTSSEEEEEETTC-----CEEEEETTTCCEEE
T ss_pred ccCCCeEEEEEcCCCCEEEEEECCC-----eEEEEECCCCcEEE
Confidence 0 011223333 678888888764 58899998876543
No 363
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=21.37 E-value=2e+02 Score=19.67 Aligned_cols=28 Identities=21% Similarity=0.378 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHhhhhHhHHHHHHHHHH
Q 007704 265 INELIKEVAELKAFKTEQTLKMKELEQK 292 (592)
Q Consensus 265 i~~l~~e~~~l~~~~~~~~~~~~~l~~~ 292 (592)
+.+|..+.+.++.+..++..++..|+..
T Consensus 5 l~eLE~r~k~le~~naeLEervstLq~E 32 (42)
T 2oqq_A 5 LSELENRVKDLENKNSELEERLSTLQNE 32 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567777777777777766666666543
Done!