Query 007705
Match_columns 592
No_of_seqs 301 out of 1353
Neff 5.3
Searched_HMMs 46136
Date Thu Mar 28 14:13:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007705.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007705hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00176 galactinol synthase 100.0 3.1E-46 6.6E-51 391.2 22.0 236 292-542 18-295 (333)
2 cd02537 GT8_Glycogenin Glycoge 100.0 4.3E-40 9.2E-45 330.7 20.4 230 297-541 1-240 (240)
3 cd06914 GT8_GNT1 GNT1 is a fun 100.0 5.8E-38 1.3E-42 322.1 18.1 241 297-541 1-278 (278)
4 cd00505 Glyco_transf_8 Members 100.0 3.2E-32 7E-37 273.5 16.9 202 298-508 2-245 (246)
5 cd04194 GT8_A4GalT_like A4GalT 100.0 6.1E-31 1.3E-35 263.5 11.4 203 303-508 5-247 (248)
6 PF01501 Glyco_transf_8: Glyco 100.0 7.9E-31 1.7E-35 257.2 9.7 201 303-510 4-249 (250)
7 PRK15171 lipopolysaccharide 1, 100.0 1.1E-29 2.4E-34 267.5 17.2 218 301-541 28-289 (334)
8 cd06429 GT8_like_1 GT8_like_1 100.0 8.8E-28 1.9E-32 244.9 15.1 205 305-538 7-256 (257)
9 COG1442 RfaJ Lipopolysaccharid 99.9 1.9E-27 4.2E-32 249.0 13.1 201 303-511 7-248 (325)
10 cd06431 GT8_LARGE_C LARGE cata 99.9 6.1E-27 1.3E-31 241.4 16.2 198 303-510 7-254 (280)
11 KOG1950 Glycosyl transferase, 99.9 5.5E-27 1.2E-31 250.0 4.6 351 222-586 7-365 (369)
12 cd06430 GT8_like_2 GT8_like_2 99.9 3.1E-22 6.8E-27 207.9 13.9 197 300-504 3-255 (304)
13 cd06432 GT8_HUGT1_C_like The C 99.9 3.8E-22 8.2E-27 202.5 13.0 185 304-503 7-239 (248)
14 PLN02523 galacturonosyltransfe 99.9 7.2E-22 1.6E-26 215.8 14.5 251 261-539 209-546 (559)
15 PLN02718 Probable galacturonos 99.8 4.9E-21 1.1E-25 211.4 10.9 195 306-510 320-576 (603)
16 PLN02867 Probable galacturonos 99.8 3.5E-21 7.7E-26 210.5 8.1 158 370-551 330-533 (535)
17 PLN02769 Probable galacturonos 99.8 3.2E-20 7E-25 205.8 12.0 220 292-539 326-617 (629)
18 PLN02870 Probable galacturonos 99.8 3.2E-20 6.8E-25 202.5 7.7 159 369-552 327-531 (533)
19 PLN02659 Probable galacturonos 99.8 1.4E-19 3.1E-24 197.4 7.6 158 369-551 328-531 (534)
20 PLN02829 Probable galacturonos 99.8 3E-19 6.5E-24 197.2 9.9 157 370-551 442-637 (639)
21 PLN02742 Probable galacturonos 99.8 2.1E-18 4.5E-23 188.7 13.1 220 293-540 224-523 (534)
22 PLN02910 polygalacturonate 4-a 99.7 2.8E-18 6.1E-23 189.4 10.0 157 370-551 460-655 (657)
23 COG5597 Alpha-N-acetylglucosam 99.7 4.5E-18 9.7E-23 174.1 -2.6 199 294-510 68-339 (368)
24 PF11051 Mannosyl_trans3: Mann 98.0 1.8E-05 4E-10 81.8 8.6 103 306-408 9-115 (271)
25 PF03407 Nucleotid_trans: Nucl 97.6 0.00015 3.2E-09 71.3 7.2 121 337-459 11-153 (212)
26 PLN03182 xyloglucan 6-xylosylt 95.0 0.096 2.1E-06 57.4 8.7 135 372-512 181-367 (429)
27 KOG1879 UDP-glucose:glycoprote 93.9 0.22 4.8E-06 60.7 9.3 176 297-474 1181-1404(1470)
28 PLN03181 glycosyltransferase; 93.0 0.19 4.1E-06 55.2 6.2 100 372-475 182-328 (453)
29 PF05637 Glyco_transf_34: gala 92.1 0.089 1.9E-06 53.8 2.2 87 372-459 60-191 (239)
30 KOG1928 Alpha-1,4-N-acetylgluc 90.5 0.27 5.9E-06 53.4 4.1 148 315-463 148-320 (409)
31 PF03314 DUF273: Protein of un 66.8 13 0.00029 37.8 6.0 78 381-459 39-126 (222)
32 cd02515 Glyco_transf_6 Glycosy 64.7 18 0.00039 38.1 6.7 165 293-471 32-246 (271)
33 PF07801 DUF1647: Protein of u 64.6 38 0.00082 32.5 8.3 65 291-358 56-122 (142)
34 cd02525 Succinoglycan_BP_ExoA 63.5 16 0.00034 35.5 5.8 80 313-399 15-97 (249)
35 cd04186 GT_2_like_c Subfamily 61.1 25 0.00054 31.5 6.3 107 311-429 10-122 (166)
36 PF00535 Glycos_transf_2: Glyc 59.7 14 0.00031 32.7 4.4 88 306-405 9-101 (169)
37 cd06439 CESA_like_1 CESA_like_ 58.2 21 0.00046 35.1 5.8 98 291-399 25-125 (251)
38 cd00761 Glyco_tranf_GTA_type G 58.0 28 0.0006 29.9 5.8 83 310-401 9-95 (156)
39 PRK15382 non-LEE encoded effec 57.7 12 0.00026 38.9 3.8 51 381-431 208-261 (326)
40 PRK15384 type III secretion sy 57.2 12 0.00025 39.0 3.7 51 381-431 213-266 (336)
41 cd06423 CESA_like CESA_like is 57.0 27 0.00059 30.7 5.8 80 311-399 10-94 (180)
42 PRK15383 type III secretion sy 55.6 13 0.00029 38.6 3.8 51 381-431 216-269 (335)
43 PF04488 Gly_transf_sug: Glyco 46.5 10 0.00023 33.3 1.3 24 314-337 5-28 (103)
44 cd06437 CESA_CaSu_A2 Cellulose 46.3 50 0.0011 32.2 6.2 21 379-399 83-103 (232)
45 cd06433 GT_2_WfgS_like WfgS an 45.1 43 0.00093 30.9 5.3 85 311-404 11-97 (202)
46 KOG1950 Glycosyl transferase, 44.7 12 0.00027 40.5 1.8 37 372-408 113-149 (369)
47 cd04192 GT_2_like_e Subfamily 44.0 35 0.00077 32.5 4.7 19 381-399 80-98 (229)
48 cd06427 CESA_like_2 CESA_like_ 43.3 54 0.0012 32.4 6.0 78 313-399 16-100 (241)
49 PRK10063 putative glycosyl tra 43.3 69 0.0015 32.6 6.8 94 297-400 3-99 (248)
50 cd06421 CESA_CelA_like CESA_Ce 41.9 1.1E+02 0.0025 29.2 7.9 80 314-399 18-100 (234)
51 TIGR03469 HonB hopene-associat 41.7 60 0.0013 35.1 6.5 16 384-399 134-149 (384)
52 PRK11204 N-glycosyltransferase 41.6 40 0.00087 36.5 5.1 94 294-399 53-150 (420)
53 PRK11498 bcsA cellulose syntha 40.7 97 0.0021 37.8 8.5 75 330-413 295-374 (852)
54 cd04195 GT2_AmsE_like GT2_AmsE 40.2 68 0.0015 30.2 5.9 80 312-399 14-96 (201)
55 cd02520 Glucosylceramide_synth 38.2 23 0.0005 33.8 2.4 21 379-399 82-102 (196)
56 cd06420 GT2_Chondriotin_Pol_N 38.0 52 0.0011 30.3 4.7 79 313-399 12-95 (182)
57 cd02511 Beta4Glucosyltransfera 36.9 84 0.0018 31.0 6.2 73 313-399 15-87 (229)
58 PF05545 FixQ: Cbb3-type cytoc 36.5 29 0.00062 26.9 2.2 31 24-54 14-44 (49)
59 cd06438 EpsO_like EpsO protein 35.8 87 0.0019 29.4 5.9 78 313-399 12-97 (183)
60 cd06434 GT2_HAS Hyaluronan syn 35.8 99 0.0021 29.9 6.4 83 311-404 14-99 (235)
61 cd04185 GT_2_like_b Subfamily 35.4 35 0.00076 32.3 3.1 83 313-399 12-95 (202)
62 COG0463 WcaA Glycosyltransfera 34.8 68 0.0015 28.0 4.6 83 310-399 15-98 (291)
63 cd02522 GT_2_like_a GT_2_like_ 33.4 66 0.0014 30.7 4.7 75 312-399 13-88 (221)
64 cd04196 GT_2_like_d Subfamily 30.7 1.2E+02 0.0026 28.5 5.9 27 380-406 76-103 (214)
65 PF10111 Glyco_tranf_2_2: Glyc 29.5 1.1E+02 0.0024 31.5 5.9 88 311-405 17-111 (281)
66 cd06913 beta3GnTL1_like Beta 1 26.6 1.3E+02 0.0029 28.9 5.6 26 374-399 75-100 (219)
67 cd02514 GT13_GLCNAC-TI GT13_GL 26.4 1.6E+02 0.0034 32.1 6.5 93 311-404 13-118 (334)
68 cd02510 pp-GalNAc-T pp-GalNAc- 25.9 1.2E+02 0.0026 31.2 5.4 87 311-405 12-106 (299)
69 PF03414 Glyco_transf_6: Glyco 25.7 89 0.0019 34.1 4.4 168 293-473 97-313 (337)
70 cd06442 DPM1_like DPM1_like re 25.3 66 0.0014 30.8 3.1 18 382-399 77-94 (224)
71 PF04765 DUF616: Protein of un 25.3 1.1E+02 0.0025 32.8 5.0 53 349-405 121-174 (305)
72 cd06435 CESA_NdvC_like NdvC_li 24.5 2.4E+02 0.0052 27.3 6.9 17 383-399 84-100 (236)
73 PRK10073 putative glycosyl tra 24.3 1.3E+02 0.0028 32.0 5.4 91 296-399 7-101 (328)
74 cd04184 GT2_RfbC_Mx_like Myxoc 24.2 1.3E+02 0.0029 28.1 5.0 22 378-399 78-99 (202)
75 COG4736 CcoQ Cbb3-type cytochr 23.9 63 0.0014 26.7 2.2 31 23-53 13-43 (60)
76 cd04191 Glucan_BSP_ModH Glucan 21.8 2.5E+02 0.0054 28.9 6.7 40 382-421 94-138 (254)
77 TIGR03472 HpnI hopanoid biosyn 21.7 61 0.0013 34.9 2.3 20 380-399 123-142 (373)
78 TIGR03111 glyc2_xrt_Gpos1 puta 21.5 2.4E+02 0.0051 31.3 6.9 96 293-399 47-147 (439)
79 PRK13915 putative glucosyl-3-p 21.4 2.4E+02 0.0051 29.9 6.6 92 295-395 31-127 (306)
80 PF05704 Caps_synth: Capsular 21.3 1.3E+02 0.0028 31.7 4.5 129 292-441 42-187 (276)
81 PF03193 DUF258: Protein of un 20.7 58 0.0013 31.7 1.7 26 55-80 122-147 (161)
82 cd04179 DPM_DPG-synthase_like 20.5 85 0.0018 28.9 2.7 87 313-405 12-102 (185)
No 1
>PLN00176 galactinol synthase
Probab=100.00 E-value=3.1e-46 Score=391.18 Aligned_cols=236 Identities=28% Similarity=0.497 Sum_probs=196.2
Q ss_pred CCCCCEEEEEEeecChhhHHHHHHHHHHHHHhCCCCcEEEEECCCCCHHHHHHHHHcCCEEEEEeeccCcccccc---cC
Q 007705 292 KIAKREAYATVLHSSEAYVCGAITLAQSLRKTGTKRDLVLLIDNSISIPKREALTAAGWKIRIIKRIRNPRAEKK---TY 368 (592)
Q Consensus 292 ~~~~r~AYVTlLtsdd~Yl~gAlVL~~SLr~~ns~~dLvVLvtd~ise~~r~~L~~~g~~Ii~V~~i~~p~~~~~---~~ 368 (592)
..++++||||+|++|++|++||++|++||++++++++++|+++++++++.++.|++.|+.++.|+++.++..... .+
T Consensus 18 ~~~~~~AyVT~L~~n~~Y~~Ga~vL~~SLr~~~s~~~lVvlVt~dVp~e~r~~L~~~g~~V~~V~~i~~~~~~~~~~~~~ 97 (333)
T PLN00176 18 AKPAKRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAVLPDVPEEHRRILVSQGCIVREIEPVYPPENQTQFAMAY 97 (333)
T ss_pred cccCceEEEEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCcccccccccch
Confidence 447799999999999999999999999999999999999999999999999999999999999998875543322 12
Q ss_pred CccceeeeecccccCcceEEEEecCeeeccCchhhhCCCC--ceeecCC-------------------------------
Q 007705 369 NEYNYSKFRLWQLTDYDKIIFIDADIIVLRNLDLLFHFPQ--MSATGND------------------------------- 415 (592)
Q Consensus 369 ~~~tytKL~iw~LtdYDRVLYLDaD~LVl~nIDeLFdlp~--iaAvpD~------------------------------- 415 (592)
...+|+||++|++++||||||||+|+||++|||+||+++. ++|+.|.
T Consensus 98 ~~i~~tKl~iw~l~~ydkvlyLDaD~lv~~nid~Lf~~~~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~wp~~~g 177 (333)
T PLN00176 98 YVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTWPAELG 177 (333)
T ss_pred hhhhhhhhhhccccccceEEEecCCEEeecChHHHhcCCCcceEEEecccccccccccccccccccccchhhccchhhcc
Confidence 3458999999999999999999999999999999999974 6665441
Q ss_pred ---CcceeceEEEEeCCHHHHHHHHHHHHcCCCCCCCCcchHHhhcc-ceeecCCcccccccccccchhhhhhcccccCC
Q 007705 416 ---IWIFNSGIMVIEPSNCTFRILMSKRKEIVSYNGGDQGFLNEVYV-WWHRLPRRVNFLKNFWANTTLEASVKNHLFGA 491 (592)
Q Consensus 416 ---~~yFNSGVMVInPs~~~fe~Lle~~~e~~sy~~~DQdiLN~vF~-~w~~LP~rYN~l~~~~~~~~~~~~~~~~~~~~ 491 (592)
..|||||||||+|+.++|++|++.+.....+.++|||+||.+|. +|++||.+||++..+... +.+.+.
T Consensus 178 ~~~~~yFNSGVlvinps~~~~~~ll~~l~~~~~~~f~DQD~LN~~F~~~~~~Lp~~YN~~~~~~~~-------~~~~~~- 249 (333)
T PLN00176 178 PPPPLYFNAGMFVFEPSLSTYEDLLETLKITPPTPFAEQDFLNMFFRDIYKPIPPVYNLVLAMLWR-------HPENVE- 249 (333)
T ss_pred CCCCCeEEeEEEEEEcCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHcCcEEECCchhcCchhhhhh-------Chhhcc-
Confidence 13999999999999999999999987766678899999999999 899999999998654211 222233
Q ss_pred CCCCcEEEEecC--CCCCCccCCCCCcccCCCCcccCCchhHHHHHHHHHHHH
Q 007705 492 DPPKLYAIHYLG--LKPWACYRDYDCNWDIGNQRVYASDVAHERWWKLHDSMD 542 (592)
Q Consensus 492 ~~~~~kIIHF~G--~KPW~~~~~~dcnw~~~~~~~~asd~~~~~WW~vyd~~~ 542 (592)
.++++||||+| .|||+.. +..+|++.++. ..++++||.+|++..
T Consensus 250 -~~~vkIIHY~~~~~KPW~~~-~~~~~~~~~~~-----~~~~~~Ww~~~~~~~ 295 (333)
T PLN00176 250 -LDKVKVVHYCAAGSKPWRYT-GKEENMDREDI-----KMLVKKWWDIYNDES 295 (333)
T ss_pred -cCCcEEEEeeCCCCCCCCCC-CcccCCChHHH-----HHHHHHHHHHhcccc
Confidence 56899999996 5999854 45667655332 357899999999654
No 2
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=100.00 E-value=4.3e-40 Score=330.69 Aligned_cols=230 Identities=38% Similarity=0.680 Sum_probs=192.9
Q ss_pred EEEEEEeecChhhHHHHHHHHHHHHHhCCCCcEEEEECCCCCHHHHHHHHHcCCEEEEEeeccCcccc---cccCCccce
Q 007705 297 EAYATVLHSSEAYVCGAITLAQSLRKTGTKRDLVLLIDNSISIPKREALTAAGWKIRIIKRIRNPRAE---KKTYNEYNY 373 (592)
Q Consensus 297 ~AYVTlLtsdd~Yl~gAlVL~~SLr~~ns~~dLvVLvtd~ise~~r~~L~~~g~~Ii~V~~i~~p~~~---~~~~~~~ty 373 (592)
.||||+++ |++|+++|.++++||++++++++++++++++++++.++.|++.+.+++.++.+..+... .......+|
T Consensus 1 ~ay~t~~~-~~~Y~~~a~vl~~SL~~~~~~~~~~vl~~~~is~~~~~~L~~~~~~~~~v~~i~~~~~~~~~~~~~~~~~~ 79 (240)
T cd02537 1 EAYVTLLT-NDDYLPGALVLGYSLRKVGSSYDLVVLVTPGVSEESREALEEVGWIVREVEPIDPPDSANLLKRPRFKDTY 79 (240)
T ss_pred CEEEEEec-ChhHHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHHcCCEEEecCccCCcchhhhccchHHHHHh
Confidence 48999985 77999999999999999999999999999999999999999999999998887655432 123456689
Q ss_pred eeeecccccCcceEEEEecCeeeccCchhhhCC-CCceeecCCC--cceeceEEEEeCCHHHHHHHHHHHHcCCCCCCCC
Q 007705 374 SKFRLWQLTDYDKIIFIDADIIVLRNLDLLFHF-PQMSATGNDI--WIFNSGIMVIEPSNCTFRILMSKRKEIVSYNGGD 450 (592)
Q Consensus 374 tKL~iw~LtdYDRVLYLDaD~LVl~nIDeLFdl-p~iaAvpD~~--~yFNSGVMVInPs~~~fe~Lle~~~e~~sy~~~D 450 (592)
+||++|++++||||||||+|++|++|||+||++ ..++|++|.. .|||||||+++|+...++++++.+.+..++.++|
T Consensus 80 ~kl~~~~l~~~drvlylD~D~~v~~~i~~Lf~~~~~~~a~~d~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~D 159 (240)
T cd02537 80 TKLRLWNLTEYDKVVFLDADTLVLRNIDELFDLPGEFAAAPDCGWPDLFNSGVFVLKPSEETFNDLLDALQDTPSFDGGD 159 (240)
T ss_pred HHHHhccccccceEEEEeCCeeEccCHHHHhCCCCceeeecccCccccccceEEEEcCCHHHHHHHHHHHhccCCCCCCC
Confidence 999999999999999999999999999999999 4688888865 6999999999999999999999998776688899
Q ss_pred cchHHhhcc-c--eeecCCcccccccccccchhhhhhcccccCCCCCCcEEEEecC-CCCCCccCCCCCcccCCCCcccC
Q 007705 451 QGFLNEVYV-W--WHRLPRRVNFLKNFWANTTLEASVKNHLFGADPPKLYAIHYLG-LKPWACYRDYDCNWDIGNQRVYA 526 (592)
Q Consensus 451 QdiLN~vF~-~--w~~LP~rYN~l~~~~~~~~~~~~~~~~~~~~~~~~~kIIHF~G-~KPW~~~~~~dcnw~~~~~~~~a 526 (592)
||+||.+|. + |..||.+||++....... .+ .....++++||||+| .|||+....+.+++ ...
T Consensus 160 QdiLN~~~~~~~~~~~l~~~yN~~~~~~~~~-------~~-~~~~~~~~~iiHf~g~~KPW~~~~~~~~~~------~~~ 225 (240)
T cd02537 160 QGLLNSYFSDRGIWKRLPFTYNALKPLRYLH-------PE-ALWFGDEIKVVHFIGGDKPWSWWRDPETKE------KDD 225 (240)
T ss_pred HHHHHHHHcCCCCEeECCcceeeehhhhccC-------ch-hhcccCCcEEEEEeCCCCCCCCCcCCCccc------ccc
Confidence 999999998 7 999999999986652111 11 012357899999999 59999876654322 222
Q ss_pred CchhHHHHHHHHHHH
Q 007705 527 SDVAHERWWKLHDSM 541 (592)
Q Consensus 527 sd~~~~~WW~vyd~~ 541 (592)
.+..++.||++|+++
T Consensus 226 ~~~~~~~w~~~~~~~ 240 (240)
T cd02537 226 YNELHQWWWDIYDEL 240 (240)
T ss_pred hHHHHHHHHHHHhhC
Confidence 467899999999874
No 3
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=100.00 E-value=5.8e-38 Score=322.10 Aligned_cols=241 Identities=26% Similarity=0.387 Sum_probs=180.5
Q ss_pred EEEEEEeecChhhHHHHHHHHHHHHHhCCCCcEEEEECCCCCHHHHH-------HHHHcCCEEEEEeeccCcccccccCC
Q 007705 297 EAYATVLHSSEAYVCGAITLAQSLRKTGTKRDLVLLIDNSISIPKRE-------ALTAAGWKIRIIKRIRNPRAEKKTYN 369 (592)
Q Consensus 297 ~AYVTlLtsdd~Yl~gAlVL~~SLr~~ns~~dLvVLvtd~ise~~r~-------~L~~~g~~Ii~V~~i~~p~~~~~~~~ 369 (592)
+||||++| +++|+|||+++++||++++|++++|+|++++++..... .+...++.+..|+.+..+. .....
T Consensus 1 fAYvtl~T-n~~YL~gAlvL~~sLr~~gs~~dlVvLvt~~~~~~~~~~~~~~~~~l~~~~~~v~~v~~~~~~~--~~~~~ 77 (278)
T cd06914 1 YAYVNYAT-NADYLCNALILFEQLRRLGSKAKLVLLVPETLLDRNLDDFVRRDLLLARDKVIVKLIPVIIASG--GDAYW 77 (278)
T ss_pred CeEEEEec-ChhHHHHHHHHHHHHHHhCCCCCEEEEECCCCChhhhhhHHHHHHHhhccCcEEEEcCcccCCC--CCccH
Confidence 59999986 88999999999999999999999999999999875432 2334577777777655443 11233
Q ss_pred ccceeeeecccccCcceEEEEecCeeeccCchhhhCCC-C-ceeecCCCcceeceEEEEeCCHHHHHHHHHHHHcCCC--
Q 007705 370 EYNYSKFRLWQLTDYDKIIFIDADIIVLRNLDLLFHFP-Q-MSATGNDIWIFNSGIMVIEPSNCTFRILMSKRKEIVS-- 445 (592)
Q Consensus 370 ~~tytKL~iw~LtdYDRVLYLDaD~LVl~nIDeLFdlp-~-iaAvpD~~~yFNSGVMVInPs~~~fe~Lle~~~e~~s-- 445 (592)
..+|+||++|++++||||||||||+||++|||+||++| . ..|+|+.++|||||||||+|+.++|++|++++.+..+
T Consensus 78 ~~~~tKl~~~~l~~y~kvlyLDaD~l~~~~ideLf~~~~~~~~Aap~~~~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~~ 157 (278)
T cd06914 78 AKSLTKLRAFNQTEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAPRAYWKFASHLMVIKPSKEAFKELMTEILPAYLNK 157 (278)
T ss_pred HHHHHHHHhccccceeeEEEecCChhhhcChHHHhcCCcccceeeecCcceecceeEEEeCCHHHHHHHHHHHHHhcccC
Confidence 45799999999999999999999999999999999998 2 2466777889999999999999999999999876543
Q ss_pred CCCCCcchHHhhcc-c-------eeecCCc-ccccccccccchhhhhhcc-----cccCCC--CCCcEEEEecC---CCC
Q 007705 446 YNGGDQGFLNEVYV-W-------WHRLPRR-VNFLKNFWANTTLEASVKN-----HLFGAD--PPKLYAIHYLG---LKP 506 (592)
Q Consensus 446 y~~~DQdiLN~vF~-~-------w~~LP~r-YN~l~~~~~~~~~~~~~~~-----~~~~~~--~~~~kIIHF~G---~KP 506 (592)
..++|||+||.+|. + +..||.+ ||++.+.+.........++ +.|... ..++++|||++ +||
T Consensus 158 ~~~~DQdiLN~~~~~~~~~~~~~~~~Lp~~~y~llt~~~r~~~~~~~l~~~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KP 237 (278)
T cd06914 158 KNEYDMDLINEEFYNSKQLFKPSVLVLPHRQYGLLTGEFREKLHKSFLSNAQHLYEKWDPDDVFKESKVIHFSDSPLPKP 237 (278)
T ss_pred CCCCChHHHHHHHhCCccccCcceEEcCccccccCChhhcccCHHHhhccccccccccCHHHHHhhCeEEEecCCCCCCC
Confidence 35789999999999 7 8899997 9999875433322222222 223222 26899999997 399
Q ss_pred CCccCC-------CCCcccCCCCcccCCchhHHHHHHHHHHH
Q 007705 507 WACYRD-------YDCNWDIGNQRVYASDVAHERWWKLHDSM 541 (592)
Q Consensus 507 W~~~~~-------~dcnw~~~~~~~~asd~~~~~WW~vyd~~ 541 (592)
|...+. +.|--+.+. +.-.+...++.|+..|+++
T Consensus 238 W~~~~~~~~~~~~~~~~~~~~~-~~~~~c~~~~iW~~~y~~f 278 (278)
T cd06914 238 WNYNNLEDIYCIEKIYCKMVKP-RLEDDCRACDLWNSLYADF 278 (278)
T ss_pred cCCcCHHHHHHhCCccccCCCC-CccCcchHHHHHHHHhhcC
Confidence 997543 122101111 1111234688999999863
No 4
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=99.98 E-value=3.2e-32 Score=273.51 Aligned_cols=202 Identities=29% Similarity=0.412 Sum_probs=151.9
Q ss_pred EEEEEeecChhhHHHHHHHHHHHHHhCCC-CcEEEEECCCCCHHHHHHHHHc----C--CEEEEEeeccCcc-cc-cccC
Q 007705 298 AYATVLHSSEAYVCGAITLAQSLRKTGTK-RDLVLLIDNSISIPKREALTAA----G--WKIRIIKRIRNPR-AE-KKTY 368 (592)
Q Consensus 298 AYVTlLtsdd~Yl~gAlVL~~SLr~~ns~-~dLvVLvtd~ise~~r~~L~~~----g--~~Ii~V~~i~~p~-~~-~~~~ 368 (592)
+++|+ ++|++|+.++.|+++||++++++ ..++|++ ++++++.++.|++. + ++++.++...... .. ....
T Consensus 2 ~i~~~-a~d~~y~~~~~v~i~Sl~~~~~~~~~~~il~-~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 79 (246)
T cd00505 2 AIVIV-ATGDEYLRGAIVLMKSVLRHRTKPLRFHVLT-NPLSDTFKAALDNLRKLYNFNYELIPVDILDSVDSEHLKRPI 79 (246)
T ss_pred eEEEE-ecCcchhHHHHHHHHHHHHhCCCCeEEEEEE-ccccHHHHHHHHHHHhccCceEEEEeccccCcchhhhhcCcc
Confidence 56776 56779999999999999999774 4555555 56999888888764 2 3344443221110 11 1345
Q ss_pred CccceeeeecccccC-cceEEEEecCeeeccCchhhhCCC----CceeecCC------------------CcceeceEEE
Q 007705 369 NEYNYSKFRLWQLTD-YDKIIFIDADIIVLRNLDLLFHFP----QMSATGND------------------IWIFNSGIMV 425 (592)
Q Consensus 369 ~~~tytKL~iw~Ltd-YDRVLYLDaD~LVl~nIDeLFdlp----~iaAvpD~------------------~~yFNSGVMV 425 (592)
+..+|+||+++++.+ |+||||||+|+||++||++||+++ .+||++|. ..||||||||
T Consensus 80 ~~~~y~RL~i~~llp~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~~yfNsGVml 159 (246)
T cd00505 80 KIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRREGKYYRQKRSHLAGPDYFNSGVFV 159 (246)
T ss_pred ccceeHHHHHHHHhhccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhccchhhcccCCCCCCCceeeeeEE
Confidence 677999999999876 999999999999999999999987 36677652 3499999999
Q ss_pred EeCCHHHHHHHHHHHHc-----CCCCCCCCcchHHhhcc-c---eeecCCcccccccccccchhhhhhcccccCCCCCCc
Q 007705 426 IEPSNCTFRILMSKRKE-----IVSYNGGDQGFLNEVYV-W---WHRLPRRVNFLKNFWANTTLEASVKNHLFGADPPKL 496 (592)
Q Consensus 426 InPs~~~fe~Lle~~~e-----~~sy~~~DQdiLN~vF~-~---w~~LP~rYN~l~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (592)
+|++.|+++++++...+ ..++.++|||+||.+|. + |..||.+||++.+.... ..+.+.....++
T Consensus 160 inl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~~~~i~~L~~~wN~~~~~~~~-------~~~~~~~~~~~~ 232 (246)
T cd00505 160 VNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQVPFIVKSLPCIWNVRLTGCYR-------SLNCFKAFVKNA 232 (246)
T ss_pred EechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhcCCCeEEECCCeeeEEecCccc-------cccchhhhcCCC
Confidence 99999998888765432 24577899999999999 5 99999999998654211 111122346789
Q ss_pred EEEEecCC-CCCC
Q 007705 497 YAIHYLGL-KPWA 508 (592)
Q Consensus 497 kIIHF~G~-KPW~ 508 (592)
+||||+|. |||+
T Consensus 233 ~iiHy~g~~KPW~ 245 (246)
T cd00505 233 KVIHFNGPTKPWN 245 (246)
T ss_pred EEEEeCCCCCCCC
Confidence 99999995 9996
No 5
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=99.97 E-value=6.1e-31 Score=263.49 Aligned_cols=203 Identities=27% Similarity=0.348 Sum_probs=149.0
Q ss_pred eecChhhHHHHHHHHHHHHHhCC--CCcEEEEECCCCCHHHHHHHHHc----CCEEEEEeeccCccc-----ccccCCcc
Q 007705 303 LHSSEAYVCGAITLAQSLRKTGT--KRDLVLLIDNSISIPKREALTAA----GWKIRIIKRIRNPRA-----EKKTYNEY 371 (592)
Q Consensus 303 Ltsdd~Yl~gAlVL~~SLr~~ns--~~dLvVLvtd~ise~~r~~L~~~----g~~Ii~V~~i~~p~~-----~~~~~~~~ 371 (592)
+++|++|+.++.++++||+++++ .++++|++ ++++++.++.|++. +..+..++ +..+.. ....++..
T Consensus 5 ~~~d~~y~~~~~~~l~Sl~~~~~~~~~~~~il~-~~is~~~~~~L~~~~~~~~~~i~~~~-i~~~~~~~~~~~~~~~~~~ 82 (248)
T cd04194 5 FAIDDNYAPYLAVTIKSILANNSKRDYDFYILN-DDISEENKKKLKELLKKYNSSIEFIK-IDNDDFKFFPATTDHISYA 82 (248)
T ss_pred EEecHhhHHHHHHHHHHHHhcCCCCceEEEEEe-CCCCHHHHHHHHHHHHhcCCeEEEEE-cCHHHHhcCCcccccccHH
Confidence 34699999999999999999988 45666665 56999999988875 44444332 222211 12334567
Q ss_pred ceeeeecccccC-cceEEEEecCeeeccCchhhhCCC----CceeecC-----------------CCcceeceEEEEeCC
Q 007705 372 NYSKFRLWQLTD-YDKIIFIDADIIVLRNLDLLFHFP----QMSATGN-----------------DIWIFNSGIMVIEPS 429 (592)
Q Consensus 372 tytKL~iw~Ltd-YDRVLYLDaD~LVl~nIDeLFdlp----~iaAvpD-----------------~~~yFNSGVMVInPs 429 (592)
+|+||+++++.+ |+||||||+|++|++||++||+++ .++|++| ...||||||||+|++
T Consensus 83 ~y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~~~~~~~~~~~~~yfNsGv~l~nl~ 162 (248)
T cd04194 83 TYYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKKRKRRLGGYDDGSYFNSGVLLINLK 162 (248)
T ss_pred HHHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHHHHhhcCCCcccceeeecchheeHH
Confidence 899999999875 999999999999999999999986 2567654 135999999999999
Q ss_pred HHHHHHHH----HHHHcC-CCCCCCCcchHHhhcc-ceeecCCcccccccccccchhhhhhcccccCCCCCCcEEEEecC
Q 007705 430 NCTFRILM----SKRKEI-VSYNGGDQGFLNEVYV-WWHRLPRRVNFLKNFWANTTLEASVKNHLFGADPPKLYAIHYLG 503 (592)
Q Consensus 430 ~~~fe~Ll----e~~~e~-~sy~~~DQdiLN~vF~-~w~~LP~rYN~l~~~~~~~~~~~~~~~~~~~~~~~~~kIIHF~G 503 (592)
.|+.+++. +.+.+. ..+.++|||+||.+|. +|+.||.+||++.+......... .....+....++++||||+|
T Consensus 163 ~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~~~~L~~~~N~~~~~~~~~~~~~-~~~~~~~~~~~~~~iiHf~g 241 (248)
T cd04194 163 KWREENITEKLLELIKEYGGRLIYPDQDILNAVLKDKILYLPPRYNFQTGFYYLLKKKS-KEEQELEEARKNPVIIHYTG 241 (248)
T ss_pred HHHHhhhHHHHHHHHHhCCCceeeCChHHHHHHHhCCeEEcCcccccchhHhHHhhccc-hhHHHHHHHhcCCEEEEeCC
Confidence 99765554 444443 3467899999999999 79999999999876521110000 00011223467899999999
Q ss_pred -CCCCC
Q 007705 504 -LKPWA 508 (592)
Q Consensus 504 -~KPW~ 508 (592)
.|||+
T Consensus 242 ~~KPW~ 247 (248)
T cd04194 242 SDKPWN 247 (248)
T ss_pred CCCCCC
Confidence 59997
No 6
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=99.97 E-value=7.9e-31 Score=257.23 Aligned_cols=201 Identities=30% Similarity=0.476 Sum_probs=142.9
Q ss_pred eecChhhHHHHHHHHHHHHHhCCC-CcE-EEEECCCCCHHHHHHHHHcCCEEEEEeeccCcc-----------cccccCC
Q 007705 303 LHSSEAYVCGAITLAQSLRKTGTK-RDL-VLLIDNSISIPKREALTAAGWKIRIIKRIRNPR-----------AEKKTYN 369 (592)
Q Consensus 303 Ltsdd~Yl~gAlVL~~SLr~~ns~-~dL-vVLvtd~ise~~r~~L~~~g~~Ii~V~~i~~p~-----------~~~~~~~ 369 (592)
++.|++|+.++.|+++||++++++ ..+ +++++++++++.++.|++.+..+..+..+..+. .......
T Consensus 4 ~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (250)
T PF01501_consen 4 LACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPDISMLEEFQFNSPSKRHFS 83 (250)
T ss_dssp EECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETSGGHHH--TTS-HCCTCGG
T ss_pred EEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhcccccceeeeccchHHhhhhhhhccccccccc
Confidence 456899999999999999999885 555 345678899999999998776543332221110 1112345
Q ss_pred ccceeeeecccc-cCcceEEEEecCeeeccCchhhhCCCC----ceeecC--------------------CCcceeceEE
Q 007705 370 EYNYSKFRLWQL-TDYDKIIFIDADIIVLRNLDLLFHFPQ----MSATGN--------------------DIWIFNSGIM 424 (592)
Q Consensus 370 ~~tytKL~iw~L-tdYDRVLYLDaD~LVl~nIDeLFdlp~----iaAvpD--------------------~~~yFNSGVM 424 (592)
..+|.||+++++ .+||||||||+|+||++||++||+++. ++|+.+ ...+||||||
T Consensus 84 ~~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~fNsGv~ 163 (250)
T PF01501_consen 84 PATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESFDNFPNKRFPFSERKQPGNKPYFNSGVM 163 (250)
T ss_dssp GGGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE----HHHHTSTTSSEEECESTTTTSEEEEEE
T ss_pred HHHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccchhhhccccccchhhhhhhcccchhhcccCcccccccCcEE
Confidence 678999999998 899999999999999999999999752 455533 2469999999
Q ss_pred EEeCCHHHHHHHHHHHHc----C-CCCCCCCcchHHhhcc-ceeecCCcccccccccccchhhhhhcccccCCCCCCcEE
Q 007705 425 VIEPSNCTFRILMSKRKE----I-VSYNGGDQGFLNEVYV-WWHRLPRRVNFLKNFWANTTLEASVKNHLFGADPPKLYA 498 (592)
Q Consensus 425 VInPs~~~fe~Lle~~~e----~-~sy~~~DQdiLN~vF~-~w~~LP~rYN~l~~~~~~~~~~~~~~~~~~~~~~~~~kI 498 (592)
+++++.++++.+.+.+.+ . ..+.++||++||.+|. ++..||.+||++.... + . ....+....++++|
T Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~~~~~~L~~~~N~~~~~~-~----~--~~~~~~~~~~~~~i 236 (250)
T PF01501_consen 164 LFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFYGNIKPLPCRYNCQPSWY-N----Q--SDDYFNPILEDAKI 236 (250)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHTTGEEEEEGGGSEEHHHH-H----H--THHHHHHHGCC-SE
T ss_pred EEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhccceeEEECchhccccccc-c----c--cchhhHhhcCCeEE
Confidence 999999998888766543 2 2467899999999999 8999999999987652 0 0 01111223578999
Q ss_pred EEecC-CCCCCcc
Q 007705 499 IHYLG-LKPWACY 510 (592)
Q Consensus 499 IHF~G-~KPW~~~ 510 (592)
|||+| .|||...
T Consensus 237 iHy~g~~KPW~~~ 249 (250)
T PF01501_consen 237 IHYSGPPKPWKST 249 (250)
T ss_dssp EE--SSS-TTSTT
T ss_pred EEeCCCCcCCCCC
Confidence 99999 6999863
No 7
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=99.96 E-value=1.1e-29 Score=267.47 Aligned_cols=218 Identities=19% Similarity=0.262 Sum_probs=156.4
Q ss_pred EEeecChhhHHHHHHHHHHHHHhCCCC--cEEEEECCCCCHHHHHHHHHc----CCEEEEEeeccC----cccccccCCc
Q 007705 301 TVLHSSEAYVCGAITLAQSLRKTGTKR--DLVLLIDNSISIPKREALTAA----GWKIRIIKRIRN----PRAEKKTYNE 370 (592)
Q Consensus 301 TlLtsdd~Yl~gAlVL~~SLr~~ns~~--dLvVLvtd~ise~~r~~L~~~----g~~Ii~V~~i~~----p~~~~~~~~~ 370 (592)
.+++.|++|+.++.|++.||..|+++. +++|+. ++++++.++.|++. +.++..+. +.. .......++.
T Consensus 28 Iv~~~D~ny~~~~~vsi~Sil~nn~~~~~~f~Il~-~~is~e~~~~l~~l~~~~~~~i~~~~-id~~~~~~~~~~~~~s~ 105 (334)
T PRK15171 28 IAYGIDKNFLFGCGVSIASVLLNNPDKSLVFHVFT-DYISDADKQRFSALAKQYNTRINIYL-INCERLKSLPSTKNWTY 105 (334)
T ss_pred EEEECcHhhHHHHHHHHHHHHHhCCCCCEEEEEEe-CCCCHHHHHHHHHHHHhcCCeEEEEE-eCHHHHhCCcccCcCCH
Confidence 334569999999999999999987764 456664 67999888777653 44443322 111 1111234566
Q ss_pred cceeeeeccccc--CcceEEEEecCeeeccCchhhhCCC----Cceeec-C------------------CCcceeceEEE
Q 007705 371 YNYSKFRLWQLT--DYDKIIFIDADIIVLRNLDLLFHFP----QMSATG-N------------------DIWIFNSGIMV 425 (592)
Q Consensus 371 ~tytKL~iw~Lt--dYDRVLYLDaD~LVl~nIDeLFdlp----~iaAvp-D------------------~~~yFNSGVMV 425 (592)
.+|+||+++++. ++|||||||+|+||.+||++||+++ .++|+. + ...||||||||
T Consensus 106 atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~~~~~~~~~l~~~~~~~~YFNsGVll 185 (334)
T PRK15171 106 ATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAEWWSKRAQSLQTPGLASGYFNSGFLL 185 (334)
T ss_pred HHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchhHHHHHHHhcCCccccccceecceEE
Confidence 799999999985 5999999999999999999999986 255552 1 12499999999
Q ss_pred EeCCHHHHHHHHHHH----HcC---CCCCCCCcchHHhhcc-ceeecCCcccccccccccchhhhhhcccccCCCCCCcE
Q 007705 426 IEPSNCTFRILMSKR----KEI---VSYNGGDQGFLNEVYV-WWHRLPRRVNFLKNFWANTTLEASVKNHLFGADPPKLY 497 (592)
Q Consensus 426 InPs~~~fe~Lle~~----~e~---~sy~~~DQdiLN~vF~-~w~~LP~rYN~l~~~~~~~~~~~~~~~~~~~~~~~~~k 497 (592)
||...|+.+++.+.+ .+. ..+.++|||+||.+|. +|..||.+||++.+.- .+ ...........+++
T Consensus 186 iNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~~~~~L~~~wN~~~~~~----~~--~~~~~~~~~~~~p~ 259 (334)
T PRK15171 186 INIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAGKVKFIDAKYNTQFSLN----YE--LKDSVINPVNDETV 259 (334)
T ss_pred EcHHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcCCeEECCHhhCCccchh----HH--HHhcccccccCCCE
Confidence 999999877665544 332 3567899999999999 8999999999986541 11 01111122346899
Q ss_pred EEEecCC-CCCCccCCCCCcccCCCCcccCCchhHHHHHHHHHHH
Q 007705 498 AIHYLGL-KPWACYRDYDCNWDIGNQRVYASDVAHERWWKLHDSM 541 (592)
Q Consensus 498 IIHF~G~-KPW~~~~~~dcnw~~~~~~~~asd~~~~~WW~vyd~~ 541 (592)
||||+|. |||+.+.. -...+.||++...-
T Consensus 260 IIHy~G~~KPW~~~~~---------------~~~~~~f~~~~~~s 289 (334)
T PRK15171 260 FIHYIGPTKPWHSWAD---------------YPVSQYFLKAKEAS 289 (334)
T ss_pred EEEECCCCCCCCCCCC---------------CchHHHHHHHHhcC
Confidence 9999996 99985432 12458899998853
No 8
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.95 E-value=8.8e-28 Score=244.89 Aligned_cols=205 Identities=16% Similarity=0.162 Sum_probs=142.5
Q ss_pred cChhhHHHHHHHHHHHHHhCCC-CcEEE-EECCCCCHHHHHHHHHc----CCE--EEEEeecc---Ccc-----------
Q 007705 305 SSEAYVCGAITLAQSLRKTGTK-RDLVL-LIDNSISIPKREALTAA----GWK--IRIIKRIR---NPR----------- 362 (592)
Q Consensus 305 sdd~Yl~gAlVL~~SLr~~ns~-~dLvV-Lvtd~ise~~r~~L~~~----g~~--Ii~V~~i~---~p~----------- 362 (592)
+| +|+. +.+.+.|+..++++ .++++ +++++++.+..+.+.+. +.+ +..++... ...
T Consensus 7 ~D-n~l~-~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~ 84 (257)
T cd06429 7 SD-NRLA-AAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDSLMQLESEA 84 (257)
T ss_pred ec-chhH-HHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccchhhhhhccc
Confidence 36 9995 55555566666544 66555 56788888777776553 333 33332210 000
Q ss_pred -------cccccCCccceeeeeccccc-CcceEEEEecCeeeccCchhhhCCCC----ceeecCCCcceeceEEEEeCCH
Q 007705 363 -------AEKKTYNEYNYSKFRLWQLT-DYDKIIFIDADIIVLRNLDLLFHFPQ----MSATGNDIWIFNSGIMVIEPSN 430 (592)
Q Consensus 363 -------~~~~~~~~~tytKL~iw~Lt-dYDRVLYLDaD~LVl~nIDeLFdlp~----iaAvpD~~~yFNSGVMVInPs~ 430 (592)
......+..+|.||+++++. +++||||||+|+||.+||++||+++. +||++| ||||||||||+..
T Consensus 85 ~~~~~~~~~~~~~s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d---yfNsGV~linl~~ 161 (257)
T cd06429 85 DTSNLKQRKPEYISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET---SWNPGVNVVNLTE 161 (257)
T ss_pred cccccccCCccccCHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh---hcccceEEEeHHH
Confidence 01123456789999999974 68999999999999999999999873 667777 9999999999999
Q ss_pred HHHHHHHHHH----HcCC-----CCCCCCcchHHhhcc-ceeecCCcccccccccccchhhhhhcccccCCCCCCcEEEE
Q 007705 431 CTFRILMSKR----KEIV-----SYNGGDQGFLNEVYV-WWHRLPRRVNFLKNFWANTTLEASVKNHLFGADPPKLYAIH 500 (592)
Q Consensus 431 ~~fe~Lle~~----~e~~-----sy~~~DQdiLN~vF~-~w~~LP~rYN~l~~~~~~~~~~~~~~~~~~~~~~~~~kIIH 500 (592)
|+.+++.+.+ .+.. ...++||++||.+|. +|..||.+||++ +...+. ... .....+++|||
T Consensus 162 wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~~~~~~L~~~wN~~-~l~~~~------~~~--~~~~~~~~IIH 232 (257)
T cd06429 162 WRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFYGLTSPLDPSWHVR-GLGYNY------GIR--PQDIKAAAVLH 232 (257)
T ss_pred HHhccHHHHHHHHHHHhhhcccchhhcCCccHHHHHccCeeEECChHHccc-CCcccc------ccc--ccccCCcEEEE
Confidence 9876664433 2221 145789999999999 899999999997 321110 000 12346899999
Q ss_pred ecCC-CCCCccCCCCCcccCCCCcccCCchhHHHHHHHH
Q 007705 501 YLGL-KPWACYRDYDCNWDIGNQRVYASDVAHERWWKLH 538 (592)
Q Consensus 501 F~G~-KPW~~~~~~dcnw~~~~~~~~asd~~~~~WW~vy 538 (592)
|+|. |||+.... ..+++.||+|+
T Consensus 233 y~G~~KPW~~~~~---------------~~~~~~w~~yl 256 (257)
T cd06429 233 FNGNMKPWLRTAI---------------PSYKELWEKYL 256 (257)
T ss_pred ECCCCCCcCCCCC---------------ChHHHHHHHHh
Confidence 9996 99986432 24679999986
No 9
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.95 E-value=1.9e-27 Score=248.97 Aligned_cols=201 Identities=21% Similarity=0.281 Sum_probs=152.6
Q ss_pred eecChhhHHHHHHHHHHHHHhCC--CCcEEEEECCCCCHHHHHHHHH----cCCEEE----EEeeccC-cccccccCCcc
Q 007705 303 LHSSEAYVCGAITLAQSLRKTGT--KRDLVLLIDNSISIPKREALTA----AGWKIR----IIKRIRN-PRAEKKTYNEY 371 (592)
Q Consensus 303 Ltsdd~Yl~gAlVL~~SLr~~ns--~~dLvVLvtd~ise~~r~~L~~----~g~~Ii----~V~~i~~-p~~~~~~~~~~ 371 (592)
++.|.+|+.|+.|+++||..|+. .+.++++++ +++++..+.|++ .+..+. .++.+.. |. ....++..
T Consensus 7 ~a~D~nY~~~~gvsI~SiL~~n~~~~~~fhil~~-~i~~e~~~~l~~~~~~f~~~i~~~~id~~~~~~~~~-~~~~~s~~ 84 (325)
T COG1442 7 FAFDKNYLIPAGVSIYSLLEHNRKIFYKFHILVD-GLNEEDKKKLNETAEPFKSFIVLEVIDIEPFLDYPP-FTKRFSKM 84 (325)
T ss_pred EEcccccchhHHHHHHHHHHhCccccEEEEEEec-CCCHHHHHHHHHHHHhhccceeeEEEechhhhcccc-cccchHHH
Confidence 34699999999999999999998 788888875 477877777765 343332 2222221 10 22345667
Q ss_pred ceeeeecccc-cCcceEEEEecCeeeccCchhhhCCCC----ceeecC------------------CCcceeceEEEEeC
Q 007705 372 NYSKFRLWQL-TDYDKIIFIDADIIVLRNLDLLFHFPQ----MSATGN------------------DIWIFNSGIMVIEP 428 (592)
Q Consensus 372 tytKL~iw~L-tdYDRVLYLDaD~LVl~nIDeLFdlp~----iaAvpD------------------~~~yFNSGVMVInP 428 (592)
+|.|+++.++ .+|||+||||+|+||++++++||+++. ++||.| .+.|||||||++|.
T Consensus 85 v~~R~fiadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~~~~~~~~~~~~~~~~~~yFNaG~llinl 164 (325)
T COG1442 85 VLVRYFLADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHYMKEGALRLEKGDLEGSYFNAGVLLINL 164 (325)
T ss_pred HHHHHHHHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhhhhhhhhhHhhhcccccccCccceeeehH
Confidence 8999999998 578999999999999999999999873 566655 24699999999999
Q ss_pred CHHHHHHHHHHHH----c-CCCCCCCCcchHHhhcc-ceeecCCcccccccccccchhhhhhcccccCCCCCCcEEEEec
Q 007705 429 SNCTFRILMSKRK----E-IVSYNGGDQGFLNEVYV-WWHRLPRRVNFLKNFWANTTLEASVKNHLFGADPPKLYAIHYL 502 (592)
Q Consensus 429 s~~~fe~Lle~~~----e-~~sy~~~DQdiLN~vF~-~w~~LP~rYN~l~~~~~~~~~~~~~~~~~~~~~~~~~kIIHF~ 502 (592)
..|+.+++.+++- + ...+..+|||+||.+|. +|..||.+||++.++.... ..........++.|+||+
T Consensus 165 ~~W~~~~i~~k~i~~~~~~~~~~~~~DQdiLN~i~~~~~~~L~~~YN~~~~~~~~~------~~~~~~~~~~~~~iiHy~ 238 (325)
T COG1442 165 KLWREENIFEKLIELLKDKENDLLYPDQDILNMIFEDRVLELPIRYNAIPYIDSQL------KDKYIYPFGDDPVILHYA 238 (325)
T ss_pred HHHHHhhhHHHHHHHHhccccccCCccccHHHHHHHhhhhccCcccceeehhhhcc------chhhhccCCCCceEEEec
Confidence 9998877765543 2 34677899999999999 8999999999997762111 110112446789999999
Q ss_pred CC-CCCCccC
Q 007705 503 GL-KPWACYR 511 (592)
Q Consensus 503 G~-KPW~~~~ 511 (592)
|. |||+...
T Consensus 239 g~~KPW~~~~ 248 (325)
T COG1442 239 GPTKPWHSDS 248 (325)
T ss_pred CCCCCCcCcc
Confidence 97 9999764
No 10
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=99.94 E-value=6.1e-27 Score=241.42 Aligned_cols=198 Identities=19% Similarity=0.189 Sum_probs=138.9
Q ss_pred eecChhhHHHHHHHHHHHHHhCC-CCcEEEEECCCCCHHHHHHHHHc----CCEEEEEee--ccCccc--ccccCCcc-c
Q 007705 303 LHSSEAYVCGAITLAQSLRKTGT-KRDLVLLIDNSISIPKREALTAA----GWKIRIIKR--IRNPRA--EKKTYNEY-N 372 (592)
Q Consensus 303 Ltsdd~Yl~gAlVL~~SLr~~ns-~~dLvVLvtd~ise~~r~~L~~~----g~~Ii~V~~--i~~p~~--~~~~~~~~-t 372 (592)
+++ ++|+.++.|+++||..|+. .+.++|+. ++++++..+.|.+. +.++..++. ...... ...+++.. +
T Consensus 7 ~~~-~~y~~~~~~~i~Sil~n~~~~~~fhii~-d~~s~~~~~~l~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~~s~~y~ 84 (280)
T cd06431 7 CAG-YNASRDVVTLVKSVLFYRRNPLHFHLIT-DEIARRILATLFQTWMVPAVEVSFYNAEELKSRVSWIPNKHYSGIYG 84 (280)
T ss_pred Ecc-CCcHHHHHHHHHHHHHcCCCCEEEEEEE-CCcCHHHHHHHHHhccccCcEEEEEEhHHhhhhhccCcccchhhHHH
Confidence 344 8999999999999999864 35566655 56888887777643 445443332 111111 11233333 6
Q ss_pred eeeeeccccc--CcceEEEEecCeeeccCchhhhCC--C----Cc-eeecCC------------------CcceeceEEE
Q 007705 373 YSKFRLWQLT--DYDKIIFIDADIIVLRNLDLLFHF--P----QM-SATGND------------------IWIFNSGIMV 425 (592)
Q Consensus 373 ytKL~iw~Lt--dYDRVLYLDaD~LVl~nIDeLFdl--p----~i-aAvpD~------------------~~yFNSGVMV 425 (592)
|.||+++++. ++|||||||+|+||.+||++||++ + .+ ||+++. +.|||||||+
T Consensus 85 y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~yFNsGVml 164 (280)
T cd06431 85 LMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGFNTGVIL 164 (280)
T ss_pred HHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccchhhhhhhhhhccCCCcccccceeeeeee
Confidence 7899999975 499999999999999999999987 2 13 333221 2499999999
Q ss_pred EeCCHHHHHHHHHHHH----c----CCCCCCCCcchHHhhcc-c---eeecCCcccccccccccchhhhhhcccccCCCC
Q 007705 426 IEPSNCTFRILMSKRK----E----IVSYNGGDQGFLNEVYV-W---WHRLPRRVNFLKNFWANTTLEASVKNHLFGADP 493 (592)
Q Consensus 426 InPs~~~fe~Lle~~~----e----~~sy~~~DQdiLN~vF~-~---w~~LP~rYN~l~~~~~~~~~~~~~~~~~~~~~~ 493 (592)
||.+.|+.+++.+.+. + .....++|||+||.+|. + |+.||.+||++.+.. . .. ...+. ..
T Consensus 165 inL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~~~~~~~~L~~~wN~~~~~~--~-~~----~~~~~-~~ 236 (280)
T cd06431 165 LDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQNPFLVYQLPCAWNVQLSDH--T-RS----EQCYR-DV 236 (280)
T ss_pred eeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcCCcceeEECCCccccccCcc--c-hH----hHhhc-Cc
Confidence 9999998776655442 2 23467899999999998 6 789999999986531 0 01 11121 24
Q ss_pred CCcEEEEecCC-CCCCcc
Q 007705 494 PKLYAIHYLGL-KPWACY 510 (592)
Q Consensus 494 ~~~kIIHF~G~-KPW~~~ 510 (592)
.+|+||||+|. |||...
T Consensus 237 ~~p~IIHf~g~~KPW~~~ 254 (280)
T cd06431 237 SDLKVIHWNSPKKLRVKN 254 (280)
T ss_pred CCCEEEEeCCCCCCCCcC
Confidence 78999999996 999853
No 11
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=99.93 E-value=5.5e-27 Score=249.98 Aligned_cols=351 Identities=35% Similarity=0.505 Sum_probs=282.1
Q ss_pred EEecccCCcccccCcccccccCceeEEecccHHHHhhhhcCCccceeccc--cccCCCchhhhhhccccccCCCCCCEEE
Q 007705 222 FWSKCRPMLEMFRCDDLVRQEGEFWWYYQPVIARLEQKVSLPVGSCKLAL--PLWGQGVDEVYDLSRIKSATKIAKREAY 299 (592)
Q Consensus 222 ~~~~c~p~~~~f~c~~~~~~~~~~~w~y~~d~~~L~~~~~lp~gsc~la~--pl~~~~~~ev~~~~~~~~~~~~~~r~AY 299 (592)
+.+.|+++..+++|+.++.++++ .|+|++......+++.++|++|.+.. .+...-.+.+ ........+.+|
T Consensus 7 ~~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~------~~~~~~~~~e~~ 79 (369)
T KOG1950|consen 7 EATSLLPVDLLLTIDKLVLNEGD-LLLYKTLFLFDDQALVDLVTSLDLLGLLKIGSPLKGVR------TTLKLVPKREAY 79 (369)
T ss_pred ccccccccccchhhhHHHhcccc-eEEeecceeeehhhhhccccchhhhcccccchhhhhhh------hhccCCccchhh
Confidence 66889999999999999999999 99999998888899999999999874 2222111110 112345668899
Q ss_pred EEEeecChhhHHHHHHHHHHHHHhCCCCcEEEEECCCCCHHHHHHHHHcCCEEEE---EeeccCcccccccCCccceeee
Q 007705 300 ATVLHSSEAYVCGAITLAQSLRKTGTKRDLVLLIDNSISIPKREALTAAGWKIRI---IKRIRNPRAEKKTYNEYNYSKF 376 (592)
Q Consensus 300 VTlLtsdd~Yl~gAlVL~~SLr~~ns~~dLvVLvtd~ise~~r~~L~~~g~~Ii~---V~~i~~p~~~~~~~~~~tytKL 376 (592)
++++++.-.|.+...+..++.+...+..+.+++..+.+.... +...+..+.. ++.+.++....+..+...|.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~~~a~i~~~~~i~~~~~~~~~~~v~~~~~~~~~ 156 (369)
T KOG1950|consen 80 VSLLASRVLFKDLDIVIPQSIKSKYSSADLVLLRDDKIKIWR---LIEDGAAIYLVDDIQRFRNDDANFDVPNELNYAKL 156 (369)
T ss_pred eeeecceeEEEeeeeccCccccccccceeEEeecccceeecc---eeccCceEEEecchhhccCccccccccchhccccc
Confidence 999988888888888999999988888887777554443322 3344444444 4444444444455667789999
Q ss_pred ecccccCcceEEEEecCeeeccCchhhhC-CCCceeecCCCcceeceEEEEeCCHHHHHHHHHHHHcCCCCCCCCcchHH
Q 007705 377 RLWQLTDYDKIIFIDADIIVLRNLDLLFH-FPQMSATGNDIWIFNSGIMVIEPSNCTFRILMSKRKEIVSYNGGDQGFLN 455 (592)
Q Consensus 377 ~iw~LtdYDRVLYLDaD~LVl~nIDeLFd-lp~iaAvpD~~~yFNSGVMVInPs~~~fe~Lle~~~e~~sy~~~DQdiLN 455 (592)
+.|.++.+++.+.+|+|..++.+.+.+|. ++.+++++.....||+|.|++.|+.+.+..++++......+.++|||++|
T Consensus 157 ~~~~~~~~~~~~~~d~~~~~~~~~~~~f~~~~~~~~~~~l~~~~n~~~~v~~ps~~~~~~~~~~~~~~~~~~~~~q~~l~ 236 (369)
T KOG1950|consen 157 YMFQLDFYSKLVKIDADDCILKNDDLLFSNWPDLFATNILPLIFNSGLLVFEPSLCNYKDLMEFSEEFESYNGADQGFLH 236 (369)
T ss_pred ceeeecccccceEEeccchhcCChhhhhhhchhhccCCCccceeccCccccCCCccchhhHHHhhcccCCCCCccchhhH
Confidence 99999999999999999999999999999 88899998888889999999999999999999999888999999999999
Q ss_pred hhcccee-ecCCcccccccccccchhhhhhcccccCCCCCCcEEEEecCC-CCCCccCCCCCcccCCCCcccCCchhHHH
Q 007705 456 EVYVWWH-RLPRRVNFLKNFWANTTLEASVKNHLFGADPPKLYAIHYLGL-KPWACYRDYDCNWDIGNQRVYASDVAHER 533 (592)
Q Consensus 456 ~vF~~w~-~LP~rYN~l~~~~~~~~~~~~~~~~~~~~~~~~~kIIHF~G~-KPW~~~~~~dcnw~~~~~~~~asd~~~~~ 533 (592)
.+|.+|. +.|..+|+..+.+-.... ..............+||.|. |||.++++++||++.......+.+..++.
T Consensus 237 ~~f~~~~~~~~~~~n~~~~~~~~~p~----~~~l~~~~~~~~~~~~y~~~~~p~~~~~~~~~n~~~~~~~~~~~~~~~~~ 312 (369)
T KOG1950|consen 237 LIFSWIPDRPPPSVNLNLAKLWRHPK----KNDLSRASSVLRYALHYLGANKPELCYRDFDCNLDGDEFPRKDIDSLHKK 312 (369)
T ss_pred HHhhcccCCCcccccccccccccCcc----ccchhhcccccchhhhccccCCCCccccCcccccccccccchhHHHHHhc
Confidence 9999877 889899988665322110 12222333445667899997 99999999999998755555566788999
Q ss_pred HHHHHHHHHHHHhhhcCCCcccccCcHHHHHHHHHcCCCCccceecccCcccc
Q 007705 534 WWKLHDSMDDKLQKFCGLTKRRRIDLDWDRKKAREAGLPDQHWRINVTDPRRS 586 (592)
Q Consensus 534 WW~vyd~~~e~l~~~c~l~~~~~~~~~~~R~~a~~~~~~d~h~~~~~~d~r~~ 586 (592)
||.+|++++..++..|.+...+..+..+++.+++.++++++||++...+||..
T Consensus 313 ~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (369)
T KOG1950|consen 313 WWDVYDDMSLDLKVHCKLWAKESTEYPLVRPQAELAAFPEEHDKIDYKAPRAF 365 (369)
T ss_pred cchhhccCchhhhhccccccccccccchhhchhHHhhcccccccccccCchhh
Confidence 99999999999999999988778889999999999999999999999999874
No 12
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.88 E-value=3.1e-22 Score=207.93 Aligned_cols=197 Identities=18% Similarity=0.236 Sum_probs=137.8
Q ss_pred EEEeecChhhHHHHHHHHHHHHHhCC-CCcEEEEECCCCCHHHHHHHHHc---CCEEE--EEeeccCccccccc----CC
Q 007705 300 ATVLHSSEAYVCGAITLAQSLRKTGT-KRDLVLLIDNSISIPKREALTAA---GWKIR--IIKRIRNPRAEKKT----YN 369 (592)
Q Consensus 300 VTlLtsdd~Yl~gAlVL~~SLr~~ns-~~dLvVLvtd~ise~~r~~L~~~---g~~Ii--~V~~i~~p~~~~~~----~~ 369 (592)
+++++.++. +..+.++++|+..++. ...|+|+.++..+++..+.|++. +.+.+ .+.++..|...... ..
T Consensus 3 ~~vv~~g~~-~~~~~~~lkSil~~n~~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~~~i~~~i~~I~~P~~~~~~ws~l~~ 81 (304)
T cd06430 3 LAVVACGER-LEETLTMLKSAIVFSQKPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPITFPSGNAAEWKKLFK 81 (304)
T ss_pred EEEEEcCCc-HHHHHHHHHHHHHhCCCCEEEEEEECCccCHHHHHHHHHHHHhccceeeeEEEEEecCccchhhhhhccc
Confidence 444555555 8999999999988663 56778888888999888777764 33333 44444444332111 22
Q ss_pred ccceeeeecccc-cCcceEEEEecCeeeccCchhhhCC--C----Cceee-cCC------------------CcceeceE
Q 007705 370 EYNYSKFRLWQL-TDYDKIIFIDADIIVLRNLDLLFHF--P----QMSAT-GND------------------IWIFNSGI 423 (592)
Q Consensus 370 ~~tytKL~iw~L-tdYDRVLYLDaD~LVl~nIDeLFdl--p----~iaAv-pD~------------------~~yFNSGV 423 (592)
..+|.||+++++ .++|||||||+|+||++||++||++ + .++|+ ++. ..+|||||
T Consensus 82 ~~~y~RL~ip~lLp~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~~~~~~~~~~~~~~~~gFNSGV 161 (304)
T cd06430 82 PCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYNRFARHPYYGKTGVNSGV 161 (304)
T ss_pred HHHHHHHHHHHHhhhhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccchhhhhhhcccCcccccccccce
Confidence 368999999986 4689999999999999999999986 3 24444 321 02599999
Q ss_pred EEEeCCHHHH-----------HH----HHHHHHcC-CCCCCCCcchHHhhcc-c---eeecCCcccccccccccchhhhh
Q 007705 424 MVIEPSNCTF-----------RI----LMSKRKEI-VSYNGGDQGFLNEVYV-W---WHRLPRRVNFLKNFWANTTLEAS 483 (592)
Q Consensus 424 MVInPs~~~f-----------e~----Lle~~~e~-~sy~~~DQdiLN~vF~-~---w~~LP~rYN~l~~~~~~~~~~~~ 483 (592)
|++|...|+. .+ +++.+.+. ..+.++|||+||.+|. + +..||.+||++.... .+
T Consensus 162 mLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~DQDiLN~v~~~~p~~~~~Lp~~wN~~~d~~---~y--- 235 (304)
T cd06430 162 MLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLINIIFHHNPEMLYVFPCHWNYRPDHC---MY--- 235 (304)
T ss_pred eeeeHHHHHhhhcccccchhhhhHHHHHHHHHHhcccCCCCCCHHHHHHHHcCCCCeEEEcCccccCCccce---ee---
Confidence 9999999986 23 34444443 4567899999999999 4 789999999875331 10
Q ss_pred hcccccCCCCCCcEEEEecCC
Q 007705 484 VKNHLFGADPPKLYAIHYLGL 504 (592)
Q Consensus 484 ~~~~~~~~~~~~~kIIHF~G~ 504 (592)
+........+.+++||..+.
T Consensus 236 -~~~~~~~~~~~~~~~H~n~~ 255 (304)
T cd06430 236 -GSNCKAAEEEGVFILHGNRG 255 (304)
T ss_pred -cccccccccccceEEEcCCC
Confidence 11112234578999999864
No 13
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=99.87 E-value=3.8e-22 Score=202.50 Aligned_cols=185 Identities=21% Similarity=0.170 Sum_probs=133.2
Q ss_pred ecChhhHHHHHHHHHHHHHhCC-CCcEEEEECCCCCHHHHHHHHH----cCCEEEEEeeccCccc-cc---ccCCcccee
Q 007705 304 HSSEAYVCGAITLAQSLRKTGT-KRDLVLLIDNSISIPKREALTA----AGWKIRIIKRIRNPRA-EK---KTYNEYNYS 374 (592)
Q Consensus 304 tsdd~Yl~gAlVL~~SLr~~ns-~~dLvVLvtd~ise~~r~~L~~----~g~~Ii~V~~i~~p~~-~~---~~~~~~tyt 374 (592)
++++.|+.++.|++.||..|+. .+.++|++ +++|++.++.|++ .+.++..+.. ..+.. .. .....++|.
T Consensus 7 ~~~~~y~~~~~v~l~Sll~nn~~~~~fyil~-~~is~e~~~~l~~~~~~~~~~i~~i~i-~~~~~~~~~~~~~~~~~~y~ 84 (248)
T cd06432 7 ASGHLYERFLRIMMLSVMKNTKSPVKFWFIK-NFLSPQFKEFLPEMAKEYGFEYELVTY-KWPRWLHKQTEKQRIIWGYK 84 (248)
T ss_pred cCcHHHHHHHHHHHHHHHHcCCCCEEEEEEe-CCCCHHHHHHHHHHHHHhCCceEEEEe-cChhhhhcccccchhHHHHH
Confidence 6789999999999999999863 56777777 5799988877765 3554433322 11110 00 011134677
Q ss_pred eeecccc-c-CcceEEEEecCeeeccCchhhhCCCC----ceeecCC-----------------------CcceeceEEE
Q 007705 375 KFRLWQL-T-DYDKIIFIDADIIVLRNLDLLFHFPQ----MSATGND-----------------------IWIFNSGIMV 425 (592)
Q Consensus 375 KL~iw~L-t-dYDRVLYLDaD~LVl~nIDeLFdlp~----iaAvpD~-----------------------~~yFNSGVMV 425 (592)
+|.+..+ . ++|||||||+|+||.+||++||+++. +||+++. ..|||||||+
T Consensus 85 rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~~~~~~~~~~~~~~~~~l~~~~YfNSGVml 164 (248)
T cd06432 85 ILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRKEMDGFRFWKQGYWKSHLRGRPYHISALYV 164 (248)
T ss_pred HHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccchhcccchhhhhhhhhhhcCCCCccceeeEE
Confidence 8777755 3 58999999999999999999999872 4555430 1399999999
Q ss_pred EeCCHHHHHHHHHHHH-------c-CCCCCCCCcchHHhhcc-c-eeecCCcccccccccccchhhhhhcccccCCCCCC
Q 007705 426 IEPSNCTFRILMSKRK-------E-IVSYNGGDQGFLNEVYV-W-WHRLPRRVNFLKNFWANTTLEASVKNHLFGADPPK 495 (592)
Q Consensus 426 InPs~~~fe~Lle~~~-------e-~~sy~~~DQdiLN~vF~-~-w~~LP~rYN~l~~~~~~~~~~~~~~~~~~~~~~~~ 495 (592)
||..+|+.+++.+.+. + ...+.++|||+||.++. . ++.||.+||++..+. + ....+.
T Consensus 165 iNL~~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDiLN~v~~~~~i~~Lp~~w~~~~~~~---------~----~~~~~~ 231 (248)
T cd06432 165 VDLKRFRRIAAGDRLRGQYQQLSQDPNSLANLDQDLPNNMQHQVPIFSLPQEWLWCETWC---------S----DESKKK 231 (248)
T ss_pred EeHHHHHHHhHHHHHHHHHHHHhcCCCccccCCchhhHHHhccCCeEECChHHHHHHHHh---------c----ccccCc
Confidence 9999998877655222 2 24577899999999996 4 999999999975541 1 123578
Q ss_pred cEEEEecC
Q 007705 496 LYAIHYLG 503 (592)
Q Consensus 496 ~kIIHF~G 503 (592)
+++|||..
T Consensus 232 ~~~~~~~~ 239 (248)
T cd06432 232 AKTIDLCN 239 (248)
T ss_pred cceeeccc
Confidence 99999964
No 14
>PLN02523 galacturonosyltransferase
Probab=99.87 E-value=7.2e-22 Score=215.85 Aligned_cols=251 Identities=18% Similarity=0.218 Sum_probs=164.0
Q ss_pred cCCccceeccccccCCCchh--hhh-hcccccc-CCCCCCEEEEEEeecChhhHHHHHHHHHHHHHh-CCCCcEEE-EEC
Q 007705 261 SLPVGSCKLALPLWGQGVDE--VYD-LSRIKSA-TKIAKREAYATVLHSSEAYVCGAITLAQSLRKT-GTKRDLVL-LID 334 (592)
Q Consensus 261 ~lp~gsc~la~pl~~~~~~e--v~~-~~~~~~~-~~~~~r~AYVTlLtsdd~Yl~gAlVL~~SLr~~-ns~~dLvV-Lvt 334 (592)
.+|-|==+|+|.|..+-... .+. ...+.++ -..++-+-||.+ +| + +.+|.|.+.|+..| +...++++ ++|
T Consensus 209 t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~~~~~l~dp~l~Hy~if--Sd-N-vlAAsVvInStv~Ns~~p~~~VFHIVT 284 (559)
T PLN02523 209 SIPKSLHCLAMRLMEERIAHPEKYKDEGKPPPPELEDPSLYHYAIF--SD-N-VIAASVVVNSAVKNAKEPWKHVFHVVT 284 (559)
T ss_pred hCCCCccchhhHhHHHHHhChHhhhccCCCcchhccCCCcceEEEe--cC-c-chhhhhhHHHHHHccCCCcceEEEEEe
Confidence 46777667787776541110 000 0001011 234444556643 33 4 99999999999998 55656655 677
Q ss_pred CCCCHHHHHHHHHc----C--CEEEEEeecc--C----cc-----c-------------------cc------ccCCccc
Q 007705 335 NSISIPKREALTAA----G--WKIRIIKRIR--N----PR-----A-------------------EK------KTYNEYN 372 (592)
Q Consensus 335 d~ise~~r~~L~~~----g--~~Ii~V~~i~--~----p~-----~-------------------~~------~~~~~~t 372 (592)
|.++...++.+-.. + +++..|+.+. + |. . .+ ...+..+
T Consensus 285 D~ln~~amk~Wf~~n~~~~a~I~V~~Iedf~~ln~~~~pvlk~l~s~~~~~~~f~~~~~~~~~~~~~~k~~~p~ylS~~n 364 (559)
T PLN02523 285 DRMNLAAMKVMFKMRDLNGAHVEVKAVEDYKFLNSSYVPVLRQLESANLQKFYFENKLENATKDSSNMKFRNPKYLSMLN 364 (559)
T ss_pred CCCCHHHHHHHHhhCCCCCcEEEEEEeehhhhcccccchHHHhhhhhhhhhhhccccccccccccccccccCcchhhHHH
Confidence 88887776665432 2 3345554311 1 10 0 00 0123357
Q ss_pred eeeeecccc-cCcceEEEEecCeeeccCchhhhCCCC----ceeecCC------------------Ccceec-------e
Q 007705 373 YSKFRLWQL-TDYDKIIFIDADIIVLRNLDLLFHFPQ----MSATGND------------------IWIFNS-------G 422 (592)
Q Consensus 373 ytKL~iw~L-tdYDRVLYLDaD~LVl~nIDeLFdlp~----iaAvpD~------------------~~yFNS-------G 422 (592)
|.||+++++ .+++||||||+|+||.+||++||++|. ++|+.|. ..|||+ |
T Consensus 365 y~Rf~IPeLLP~ldKVLYLD~DVVVq~DLseLw~iDL~gkv~aAVeDc~~~~~r~~~~ln~s~p~i~~yFNs~aC~wnsG 444 (559)
T PLN02523 365 HLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWKIDMDGKVNGAVETCFGSFHRYAQYLNFSHPLIKEKFNPKACAWAYG 444 (559)
T ss_pred HHHHHHHHHhcccCeEEEEeCCEEecCCHHHHHhCcCCCceEEEehhhhhHHHHHHHhhcccchhhhhCcCCCcccccCC
Confidence 899999997 469999999999999999999999873 5565442 126776 9
Q ss_pred EEEEeCCHHHHHHHHHHHH----cCCCCCCCCcchHH---hhcc-ceeecCCcccccccccccchhhhhhcccccCCCCC
Q 007705 423 IMVIEPSNCTFRILMSKRK----EIVSYNGGDQGFLN---EVYV-WWHRLPRRVNFLKNFWANTTLEASVKNHLFGADPP 494 (592)
Q Consensus 423 VMVInPs~~~fe~Lle~~~----e~~sy~~~DQdiLN---~vF~-~w~~LP~rYN~l~~~~~~~~~~~~~~~~~~~~~~~ 494 (592)
|||||...|+.+++.+... ........|||.|| .+|. +|..|+.+||++... ++. .......+
T Consensus 445 VmlINL~~WRe~nITek~~~w~~ln~~~~l~DqdaLpp~LivF~gri~~LD~rWNvlglG-y~~--------~i~~~~i~ 515 (559)
T PLN02523 445 MNIFDLDAWRREKCTEQYHYWQNLNENRTLWKLGTLPPGLITFYSTTKPLDKSWHVLGLG-YNP--------SISMDEIR 515 (559)
T ss_pred cEEEeHHHHHHhchHHHHHHHHHhccccccccccccchHHHHhcCceEecCchhhccCCc-cCC--------CccccccC
Confidence 9999999999888877653 12345678999996 7887 899999999986422 111 11123457
Q ss_pred CcEEEEecCC-CCCCccCCCCCcccCCCCcccCCchhHHHHHHHHH
Q 007705 495 KLYAIHYLGL-KPWACYRDYDCNWDIGNQRVYASDVAHERWWKLHD 539 (592)
Q Consensus 495 ~~kIIHF~G~-KPW~~~~~~dcnw~~~~~~~~asd~~~~~WW~vyd 539 (592)
+++||||+|. |||..... ..+++.||+|++
T Consensus 516 ~paIIHYnG~~KPWle~~i---------------~~yr~~W~kYl~ 546 (559)
T PLN02523 516 NAAVIHFNGNMKPWLDIAM---------------NQFKPLWTKYVD 546 (559)
T ss_pred CCEEEEECCCCCccccCCC---------------CcchHHHHHHHc
Confidence 8999999995 99985421 235788999877
No 15
>PLN02718 Probable galacturonosyltransferase
Probab=99.84 E-value=4.9e-21 Score=211.44 Aligned_cols=195 Identities=19% Similarity=0.236 Sum_probs=134.9
Q ss_pred ChhhHHHHHHHHHHHHHh-CCCCcEEE-EECCCCCHHHHHHHHHcC------CEEEEEeeccC-cc-----------ccc
Q 007705 306 SEAYVCGAITLAQSLRKT-GTKRDLVL-LIDNSISIPKREALTAAG------WKIRIIKRIRN-PR-----------AEK 365 (592)
Q Consensus 306 dd~Yl~gAlVL~~SLr~~-ns~~dLvV-Lvtd~ise~~r~~L~~~g------~~Ii~V~~i~~-p~-----------~~~ 365 (592)
+|+|+ ++.|++.|+..| +....+++ ++++.++...++.+.... ++++.++.... |. ...
T Consensus 320 sDNvl-aasVvInSil~Ns~np~~ivFHVvTD~is~~~mk~wf~l~~~~~a~I~V~~Iddf~~lp~~~~~~lk~l~s~~~ 398 (603)
T PLN02718 320 SDNVL-ACSVVVNSTISSSKEPEKIVFHVVTDSLNYPAISMWFLLNPPGKATIQILNIDDMNVLPADYNSLLMKQNSHDP 398 (603)
T ss_pred cCCce-eEEEEhhhhhhccCCCCcEEEEEEeCCCCHHHHHHHHHhCCCCCcEEEEEecchhccccccchhhhhhcccccc
Confidence 34675 899999999987 23334544 567889988887665532 23334432210 10 001
Q ss_pred ccCCccceeeeeccccc-CcceEEEEecCeeeccCchhhhCCCC----ceeecCC-------------------------
Q 007705 366 KTYNEYNYSKFRLWQLT-DYDKIIFIDADIIVLRNLDLLFHFPQ----MSATGND------------------------- 415 (592)
Q Consensus 366 ~~~~~~tytKL~iw~Lt-dYDRVLYLDaD~LVl~nIDeLFdlp~----iaAvpD~------------------------- 415 (592)
...+..+|+||+++++. +++||||||+|+||.+||++||+++. ++|+.+.
T Consensus 399 ~~~S~~~y~Rl~ipellp~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~~~lnfs~p~i~~~f 478 (603)
T PLN02718 399 RYISALNHARFYLPDIFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSMDTFINFSDPWVAKKF 478 (603)
T ss_pred ccccHHHHHHHHHHHHhcccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhhhhhhhccchhhhccc
Confidence 13445689999999974 68999999999999999999999872 4444321
Q ss_pred ---CcceeceEEEEeCCHHHHHHHHHHH----HcCCCCCCCCcchHH---hhcc-ceeecCCcccccccccccchhhhhh
Q 007705 416 ---IWIFNSGIMVIEPSNCTFRILMSKR----KEIVSYNGGDQGFLN---EVYV-WWHRLPRRVNFLKNFWANTTLEASV 484 (592)
Q Consensus 416 ---~~yFNSGVMVInPs~~~fe~Lle~~----~e~~sy~~~DQdiLN---~vF~-~w~~LP~rYN~l~~~~~~~~~~~~~ 484 (592)
.+|||+||||||...|+.+++.+.+ .........|||.|| .+|. +|..||.+||.+...+ ..
T Consensus 479 n~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~n~~~~l~dqdaLpp~LlvF~gri~~LD~rWNv~gLG~-~~------ 551 (603)
T PLN02718 479 DPKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVKRPLWKAGSLPIGWLTFYNQTVALDKRWHVLGLGH-ES------ 551 (603)
T ss_pred CCCccccccceEEEeHHHHHhcChHHHHHHHHHhccCccccCcccccHHHHHhcCceeecChHHhccCccc-cc------
Confidence 2468999999999999887666543 333333568999997 7887 8999999999864221 10
Q ss_pred cccccCCCCCCcEEEEecCC-CCCCcc
Q 007705 485 KNHLFGADPPKLYAIHYLGL-KPWACY 510 (592)
Q Consensus 485 ~~~~~~~~~~~~kIIHF~G~-KPW~~~ 510 (592)
.......+++.||||+|. |||...
T Consensus 552 --~i~~~~i~~aaIIHYnG~~KPWle~ 576 (603)
T PLN02718 552 --GVGASDIEQAAVIHYDGVMKPWLDI 576 (603)
T ss_pred --cccccccCCCEEEEECCCCCccccC
Confidence 011234678999999995 999864
No 16
>PLN02867 Probable galacturonosyltransferase
Probab=99.83 E-value=3.5e-21 Score=210.52 Aligned_cols=158 Identities=18% Similarity=0.243 Sum_probs=116.2
Q ss_pred ccceeeeeccccc-CcceEEEEecCeeeccCchhhhCCCC----ceeecCC-----------------------------
Q 007705 370 EYNYSKFRLWQLT-DYDKIIFIDADIIVLRNLDLLFHFPQ----MSATGND----------------------------- 415 (592)
Q Consensus 370 ~~tytKL~iw~Lt-dYDRVLYLDaD~LVl~nIDeLFdlp~----iaAvpD~----------------------------- 415 (592)
..+|.||+++++. +++||||||+|+||.+||++||++|. ++|+.|.
T Consensus 330 ~lnYlRflIPeLLP~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlNfsnp~i~~~~~p 409 (535)
T PLN02867 330 LLNHLRIYIPELFPDLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLNFSHPLISSNLDQ 409 (535)
T ss_pred HHHHHHHHHHHHhhccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhhccccchhhhccCCC
Confidence 4589999999974 68999999999999999999999973 6676331
Q ss_pred -CcceeceEEEEeCCHHHHHHHHHHH----HcCC--CCCCCCcchHHh---hcc-ceeecCCcccccccccccchhhhhh
Q 007705 416 -IWIFNSGIMVIEPSNCTFRILMSKR----KEIV--SYNGGDQGFLNE---VYV-WWHRLPRRVNFLKNFWANTTLEASV 484 (592)
Q Consensus 416 -~~yFNSGVMVInPs~~~fe~Lle~~----~e~~--sy~~~DQdiLN~---vF~-~w~~LP~rYN~l~~~~~~~~~~~~~ 484 (592)
..||||||||||...|+.+++.+.+ .... .....|||.||. +|. +|..||.+||++ ++.++.
T Consensus 410 ~~cYFNSGVmLINL~~WRe~nITek~~~~Le~n~~~~~~l~dqd~LN~~LlvF~g~v~~LD~rWNv~-gLgy~~------ 482 (535)
T PLN02867 410 ERCAWLYGMNVFDLKAWRRTNITEAYHKWLKLSLNSGLQLWQPGALPPALLAFKGHVHPIDPSWHVA-GLGSRP------ 482 (535)
T ss_pred CCcceecceeeeeHHHHHHhcHHHHHHHHHHhchhcccccccccccchHHHHhcCcEEECChhhccc-CCCccc------
Confidence 2378899999999999988886654 2222 245689999996 777 899999999984 332111
Q ss_pred cccccCCCCCCcEEEEecCC-CCCCccCCCCCcccCCCCcccCCchhHHHHHHHHHHHHHHHhhhcCC
Q 007705 485 KNHLFGADPPKLYAIHYLGL-KPWACYRDYDCNWDIGNQRVYASDVAHERWWKLHDSMDDKLQKFCGL 551 (592)
Q Consensus 485 ~~~~~~~~~~~~kIIHF~G~-KPW~~~~~~dcnw~~~~~~~~asd~~~~~WW~vyd~~~e~l~~~c~l 551 (592)
. .......++++||||+|. |||..... ..+++.| .-|-++.+...+.|.+
T Consensus 483 ~-~~~~~~i~~paIIHYnG~~KPW~e~~~---------------~~yR~~W-~kyl~~~~~fl~~cni 533 (535)
T PLN02867 483 P-EVPREILESAAVLHFSGPAKPWLEIGF---------------PEVRSLW-YRHVNFSDKFIRKCRI 533 (535)
T ss_pred c-cchhhhcCCcEEEEECCCCCcccccCC---------------CchhHHH-HHhcCccchHHHhccc
Confidence 0 011234578999999995 99997532 2456777 4455666665566765
No 17
>PLN02769 Probable galacturonosyltransferase
Probab=99.82 E-value=3.2e-20 Score=205.78 Aligned_cols=220 Identities=15% Similarity=0.157 Sum_probs=145.0
Q ss_pred CCCCCEEEEEEeecChhhHHHHHHHHHHHHHhCC-CCcEEE-EECCCCCHHHHHH-H-----HHcCCEEEEEeeccCc--
Q 007705 292 KIAKREAYATVLHSSEAYVCGAITLAQSLRKTGT-KRDLVL-LIDNSISIPKREA-L-----TAAGWKIRIIKRIRNP-- 361 (592)
Q Consensus 292 ~~~~r~AYVTlLtsdd~Yl~gAlVL~~SLr~~ns-~~dLvV-Lvtd~ise~~r~~-L-----~~~g~~Ii~V~~i~~p-- 361 (592)
...+-+-||.+ +| + +.+|.|.+.|...+.. ..++|. ++||..+-..++. + +.+-++|+.++.+...
T Consensus 326 ~d~~l~Hy~if--Sd-N-vlAasvvvNStv~na~~p~~~VFHiVTD~~n~~am~~WF~~n~~~~a~v~v~n~e~~~~~~~ 401 (629)
T PLN02769 326 SDPSLRHYVIF--SK-N-VLAASVVINSTVVHSRESGNIVFHVLTDAQNYYAMKHWFDRNSYKEAAVQVLNIEDLILKDL 401 (629)
T ss_pred cCCccceEEEE--ec-c-ceeeeeehhhhhhhccCccceEEEEecChhhHHHHHHHHhcCCCccceEEEeeeeeeeeccc
Confidence 34555667754 22 3 5578888888887643 344444 6677665543322 2 2223445555433211
Q ss_pred ---c---------------------cc---cccCCccceeeeeccccc-CcceEEEEecCeeeccCchhhhCCCC----c
Q 007705 362 ---R---------------------AE---KKTYNEYNYSKFRLWQLT-DYDKIIFIDADIIVLRNLDLLFHFPQ----M 409 (592)
Q Consensus 362 ---~---------------------~~---~~~~~~~tytKL~iw~Lt-dYDRVLYLDaD~LVl~nIDeLFdlp~----i 409 (592)
. .+ ....+..+|.||+++++. +.+||||||+|+||.+||++||++|. +
T Consensus 402 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~eyiS~~nh~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkvi 481 (629)
T PLN02769 402 DKFALKQLSLPEEFRVSFRSVDNPSSKQMRTEYLSVFSHSHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVN 481 (629)
T ss_pred chHHHHhhccchhhhhhhccCCCCchhccCcccccHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCCCeE
Confidence 0 00 011234589999999975 58999999999999999999999873 5
Q ss_pred eeecC-------------------CCcceeceEEEEeCCHHHHHHHHHHHH-------c--CCCCCCCCcchHHhhcc-c
Q 007705 410 SATGN-------------------DIWIFNSGIMVIEPSNCTFRILMSKRK-------E--IVSYNGGDQGFLNEVYV-W 460 (592)
Q Consensus 410 aAvpD-------------------~~~yFNSGVMVInPs~~~fe~Lle~~~-------e--~~sy~~~DQdiLN~vF~-~ 460 (592)
+|+.+ ...||||||||||...|+.+++.+.+. + ......++|+++|.+|. +
T Consensus 482 AAVedc~~rl~~~~~yl~~~~F~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~lnlvF~g~ 561 (629)
T PLN02769 482 GAVQFCGVRLGQLKNYLGDTNFDTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPASLLTFQDL 561 (629)
T ss_pred EEehhhhhhhhhhhhhhcccCCCccccccccCeeEeeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCHHHHHhcCe
Confidence 66643 124789999999999998776654322 1 12345578888888998 8
Q ss_pred eeecCCcccccccccccchhhhhhcccccCCCCCCcEEEEecCC-CCCCccCCCCCcccCCCCcccCCchhHHHHHHHHH
Q 007705 461 WHRLPRRVNFLKNFWANTTLEASVKNHLFGADPPKLYAIHYLGL-KPWACYRDYDCNWDIGNQRVYASDVAHERWWKLHD 539 (592)
Q Consensus 461 w~~LP~rYN~l~~~~~~~~~~~~~~~~~~~~~~~~~kIIHF~G~-KPW~~~~~~dcnw~~~~~~~~asd~~~~~WW~vyd 539 (592)
|..||.+||++.-.+ . .. ......++++||||+|. |||..... ..+++.||.|++
T Consensus 562 v~~LD~rWNv~gLG~-~----~~----i~~~~i~~paIIHYnG~~KPW~e~~i---------------~~yr~~W~kYl~ 617 (629)
T PLN02769 562 IYPLDDRWVLSGLGH-D----YG----IDEQAIKKAAVLHYNGNMKPWLELGI---------------PKYKKYWKRFLN 617 (629)
T ss_pred EEECCHHHccccccc-c----cc----ccccccCCcEEEEECCCCCCccCCCC---------------ChHHHHHHHHhc
Confidence 999999999863111 1 00 11134578999999995 99986421 246899999987
No 18
>PLN02870 Probable galacturonosyltransferase
Probab=99.80 E-value=3.2e-20 Score=202.47 Aligned_cols=159 Identities=18% Similarity=0.235 Sum_probs=115.6
Q ss_pred Cccceeeeeccccc-CcceEEEEecCeeeccCchhhhCCCC----ceeecCC----------------------------
Q 007705 369 NEYNYSKFRLWQLT-DYDKIIFIDADIIVLRNLDLLFHFPQ----MSATGND---------------------------- 415 (592)
Q Consensus 369 ~~~tytKL~iw~Lt-dYDRVLYLDaD~LVl~nIDeLFdlp~----iaAvpD~---------------------------- 415 (592)
+..+|+||+++++. +.+||||||+|+||.+||++||++|. ++|+.|.
T Consensus 327 S~lny~Rl~LPelLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfNfs~p~i~~~fd 406 (533)
T PLN02870 327 SLLNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKNLD 406 (533)
T ss_pred CHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhhhhcccccchhhcccC
Confidence 34589999999974 69999999999999999999999973 5555441
Q ss_pred --CcceeceEEEEeCCHHHHHHHHHHH----HcC--CCCCCCCcchH---Hhhcc-ceeecCCcccccccccccchhhhh
Q 007705 416 --IWIFNSGIMVIEPSNCTFRILMSKR----KEI--VSYNGGDQGFL---NEVYV-WWHRLPRRVNFLKNFWANTTLEAS 483 (592)
Q Consensus 416 --~~yFNSGVMVInPs~~~fe~Lle~~----~e~--~sy~~~DQdiL---N~vF~-~w~~LP~rYN~l~~~~~~~~~~~~ 483 (592)
..|||||||+||.+.|+.+++.+.+ .+. ..+.+.|||.| |.+|. +|+.||.+||++...+ +
T Consensus 407 ~~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~~l~l~DQdaLp~~livf~g~v~~LD~rWN~~gLgy-~------ 479 (533)
T PLN02870 407 PEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHMLGLGY-Q------ 479 (533)
T ss_pred cccceeeccchhccHHHHHHcChHHHHHHHHHhhhhcCceecccccccHhHHHhcCceEECChHHhcCCCCC-c------
Confidence 1356799999999999887766544 222 24567999999 57887 8999999999853221 1
Q ss_pred hcccccCCCCCCcEEEEecCC-CCCCccCCCCCcccCCCCcccCCchhHHHHHHHHHHHHHHHhhhcCCC
Q 007705 484 VKNHLFGADPPKLYAIHYLGL-KPWACYRDYDCNWDIGNQRVYASDVAHERWWKLHDSMDDKLQKFCGLT 552 (592)
Q Consensus 484 ~~~~~~~~~~~~~kIIHF~G~-KPW~~~~~~dcnw~~~~~~~~asd~~~~~WW~vyd~~~e~l~~~c~l~ 552 (592)
........++++||||+|. |||..... .. .+.+|.-|-+.....-+.|.+.
T Consensus 480 --~~~~~~~i~~aaIIHY~G~~KPW~~~~~---------------~~-yr~~W~kYl~~s~~fl~~Cni~ 531 (533)
T PLN02870 480 --SKTNIESVKKAAVIHYNGQSKPWLEIGF---------------EH-LRPFWTKYVNYSNDFIRNCHIL 531 (533)
T ss_pred --ccccccccCCcEEEEECCCCCCccccCc---------------cc-hhHHHHHHHccCchHhhhcCCC
Confidence 1112245678999999995 99985421 11 2556776766666666677764
No 19
>PLN02659 Probable galacturonosyltransferase
Probab=99.78 E-value=1.4e-19 Score=197.40 Aligned_cols=158 Identities=22% Similarity=0.233 Sum_probs=112.7
Q ss_pred Cccceeeeeccccc-CcceEEEEecCeeeccCchhhhCCCC----ceeecCC----------------------------
Q 007705 369 NEYNYSKFRLWQLT-DYDKIIFIDADIIVLRNLDLLFHFPQ----MSATGND---------------------------- 415 (592)
Q Consensus 369 ~~~tytKL~iw~Lt-dYDRVLYLDaD~LVl~nIDeLFdlp~----iaAvpD~---------------------------- 415 (592)
+-.+|+||+++++. +++||||||+|+||.+||++||++|. ++|+.|.
T Consensus 328 S~~nY~RL~IPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~s~p~i~~yFn 407 (534)
T PLN02659 328 SVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLNFSHPLIAKNFD 407 (534)
T ss_pred eHHHHHHHHHHHHhhhcCeEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhcccchhhhhccC
Confidence 34589999999974 69999999999999999999999873 4554431
Q ss_pred --CcceeceEEEEeCCHHHHHHHHHHH----HcC--CCCCCCCcchH---Hhhcc-ceeecCCcccccccccccchhhhh
Q 007705 416 --IWIFNSGIMVIEPSNCTFRILMSKR----KEI--VSYNGGDQGFL---NEVYV-WWHRLPRRVNFLKNFWANTTLEAS 483 (592)
Q Consensus 416 --~~yFNSGVMVInPs~~~fe~Lle~~----~e~--~sy~~~DQdiL---N~vF~-~w~~LP~rYN~l~~~~~~~~~~~~ 483 (592)
..|||||||+||...|+.+++.+.+ .+. ..+...|||+| |.+|. +|+.||.+||++... ++.
T Consensus 408 ~~~cYfNsGVlLINLk~WRe~nITek~l~~l~~n~~~~l~l~DQdaLp~~LivF~g~v~~LD~rWN~~gLg-~~~----- 481 (534)
T PLN02659 408 PNECAWAYGMNIFDLEAWRKTNISSTYHHWLEENLKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLG-YQE----- 481 (534)
T ss_pred ccccceecceeEeeHHHHHhcChHHHHHHHHHhcccccccccccccchHHHHHhcCCEEECChhheecCCc-ccc-----
Confidence 2378899999999999877665544 333 23556899999 57888 899999999985322 111
Q ss_pred hcccccCCCCCCcEEEEecCC-CCCCccCCCCCcccCCCCcccCCchhHHHHHHHHHHHHHHHhhhcCC
Q 007705 484 VKNHLFGADPPKLYAIHYLGL-KPWACYRDYDCNWDIGNQRVYASDVAHERWWKLHDSMDDKLQKFCGL 551 (592)
Q Consensus 484 ~~~~~~~~~~~~~kIIHF~G~-KPW~~~~~~dcnw~~~~~~~~asd~~~~~WW~vyd~~~e~l~~~c~l 551 (592)
+. . ....++++||||+|. |||..... ..+++.|-+|.+. ....-+.|.+
T Consensus 482 -~~-~-~~~i~~paIIHYnG~~KPW~~~~~---------------~~yr~~W~kYl~~-s~~fl~~Cni 531 (534)
T PLN02659 482 -NT-S-LADAESAGVVHFNGRAKPWLDIAF---------------PQLRPLWAKYIDS-SDKFIKSCHI 531 (534)
T ss_pred -cc-c-ccccCCcEEEEECCCCCccccccC---------------CcchhHHHHHhcc-CCHHHHhcCC
Confidence 10 1 123578999999996 99997531 2456677776653 2233344554
No 20
>PLN02829 Probable galacturonosyltransferase
Probab=99.78 E-value=3e-19 Score=197.23 Aligned_cols=157 Identities=21% Similarity=0.231 Sum_probs=111.6
Q ss_pred ccceeeeeccccc-CcceEEEEecCeeeccCchhhhCCCC----ceeecC-------------------------CCcce
Q 007705 370 EYNYSKFRLWQLT-DYDKIIFIDADIIVLRNLDLLFHFPQ----MSATGN-------------------------DIWIF 419 (592)
Q Consensus 370 ~~tytKL~iw~Lt-dYDRVLYLDaD~LVl~nIDeLFdlp~----iaAvpD-------------------------~~~yF 419 (592)
..+|+||+++++. +++||||||+|+||.+||++||+++. ++|+.+ ..+||
T Consensus 442 ~lnY~RfyLPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~~f~r~~~~l~fs~p~i~~~Fn~~~CyF 521 (639)
T PLN02829 442 ILNHLRFYLPEIFPKLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAVETCGESFHRFDRYLNFSNPLISKNFDPHACGW 521 (639)
T ss_pred HHHHHHHHHHHHhcccCeEEEEeCCEEeCCChHHHHhCCCCCceEEEeccchhhhhhhhhhhhccchHhhhccCCcccce
Confidence 3578999999975 58999999999999999999999873 445543 12489
Q ss_pred eceEEEEeCCHHHHHHHHHHHH----cCCCCCCCCcchHHhh---cc-ceeecCCcccccccccccchhhhhhcccccCC
Q 007705 420 NSGIMVIEPSNCTFRILMSKRK----EIVSYNGGDQGFLNEV---YV-WWHRLPRRVNFLKNFWANTTLEASVKNHLFGA 491 (592)
Q Consensus 420 NSGVMVInPs~~~fe~Lle~~~----e~~sy~~~DQdiLN~v---F~-~w~~LP~rYN~l~~~~~~~~~~~~~~~~~~~~ 491 (592)
|+||||||...|+.+++.+.+. ....-...|||.||.. |. ++..|+.+||++...+ + ......
T Consensus 522 NSGVmVINL~~WRe~nITe~y~~wm~~n~~r~L~dlgaLPp~Ll~F~g~i~~LD~rWNv~GLGy-~--------~~v~~~ 592 (639)
T PLN02829 522 AYGMNVFDLDEWKRQNITEVYHSWQKLNHDRQLWKLGTLPPGLITFWKRTYPLDRSWHVLGLGY-N--------PNVNQR 592 (639)
T ss_pred ecceEEEeHHHHHHhChHHHHHHHHHHccCCccccccCCChHHHHhcCceEecChhheecCCCC-C--------cccchh
Confidence 9999999999999877665443 2222245899999975 35 8999999999974321 1 112234
Q ss_pred CCCCcEEEEecCC-CCCCccCCCCCcccCCCCcccCCchhHHHHHHHHHHHHHHHhhhcCC
Q 007705 492 DPPKLYAIHYLGL-KPWACYRDYDCNWDIGNQRVYASDVAHERWWKLHDSMDDKLQKFCGL 551 (592)
Q Consensus 492 ~~~~~kIIHF~G~-KPW~~~~~~dcnw~~~~~~~~asd~~~~~WW~vyd~~~e~l~~~c~l 551 (592)
...++.||||+|. |||..... ..+++.|..|.+ .....-+.|.+
T Consensus 593 ~i~~aaIIHynG~~KPWle~~i---------------~~yr~lW~kYl~-~~~~fl~~Cni 637 (639)
T PLN02829 593 DIERAAVIHYNGNMKPWLEIGI---------------PKYRNYWSKYVD-YDQVYLRECNI 637 (639)
T ss_pred cccCCeEEEECCCCCccccCCc---------------ccchHHHHHHHh-cCchHHHhCCC
Confidence 5678999999995 99986421 135566766654 33333345554
No 21
>PLN02742 Probable galacturonosyltransferase
Probab=99.77 E-value=2.1e-18 Score=188.66 Aligned_cols=220 Identities=16% Similarity=0.204 Sum_probs=144.8
Q ss_pred CCCCEEEEEEeecChhhHHHHHHHHHHHHHhCCC-CcEEE-EECCCCCHHHHHHH-HH-----cCCEEEEEeecc---C-
Q 007705 293 IAKREAYATVLHSSEAYVCGAITLAQSLRKTGTK-RDLVL-LIDNSISIPKREAL-TA-----AGWKIRIIKRIR---N- 360 (592)
Q Consensus 293 ~~~r~AYVTlLtsdd~Yl~gAlVL~~SLr~~ns~-~dLvV-Lvtd~ise~~r~~L-~~-----~g~~Ii~V~~i~---~- 360 (592)
..+-+-||.+ +| + +.+|.|.+.|...+... ..+|+ ++||..+-..++.. .. .-+++..++.+. .
T Consensus 224 d~~l~Hy~if--Sd-N-vlAasvvvnStv~nsk~P~~~VFHiVTD~~n~~aM~~WF~~n~~~~a~v~V~n~e~f~wl~~~ 299 (534)
T PLN02742 224 DNNLYHFCVF--SD-N-ILATSVVVNSTVSNAKHPDQLVFHLVTDEVNYGAMQAWFAMNDFKGVTVEVQKIEEFSWLNAS 299 (534)
T ss_pred CCCcceEEEE--ec-c-chhhhhhhhhhHhhhcCCCcEEEEEeechhhHHHHHHHHhhCCCCccEEEEEEeccccccccc
Confidence 4455667764 32 2 66788888888876432 23544 66776655444332 21 224455554321 1
Q ss_pred --c--------c-------------c-----c-cccCCccceeeeeccccc-CcceEEEEecCeeeccCchhhhCCCC--
Q 007705 361 --P--------R-------------A-----E-KKTYNEYNYSKFRLWQLT-DYDKIIFIDADIIVLRNLDLLFHFPQ-- 408 (592)
Q Consensus 361 --p--------~-------------~-----~-~~~~~~~tytKL~iw~Lt-dYDRVLYLDaD~LVl~nIDeLFdlp~-- 408 (592)
| . . . ....+..+|.||+++++. +.+||||||+|+||.+||++||+++.
T Consensus 300 ~~pvl~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~y~s~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~ 379 (534)
T PLN02742 300 YVPVLKQLQDSDTQSYYFSGSQDDGKTEIKFRNPKYLSMLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDLHG 379 (534)
T ss_pred cchHHHHhhhhhhhhhhcccccccccccccccCcccccHHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCCCC
Confidence 1 0 0 0 001234579999999975 58999999999999999999999873
Q ss_pred --ceeecCC-------------------------CcceeceEEEEeCCHHHHHHHHHHHH----cCCCCCCCCcchHHhh
Q 007705 409 --MSATGND-------------------------IWIFNSGIMVIEPSNCTFRILMSKRK----EIVSYNGGDQGFLNEV 457 (592)
Q Consensus 409 --iaAvpD~-------------------------~~yFNSGVMVInPs~~~fe~Lle~~~----e~~sy~~~DQdiLN~v 457 (592)
++|+.|. ..+||+|||||+...|+.+++.+... ........|||.||..
T Consensus 380 ~viaAVedC~~~f~ry~~yLnfS~p~i~~~f~~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~gaLpp~ 459 (534)
T PLN02742 380 NVNGAVETCLETFHRYHKYLNFSHPLISSHFDPDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGTLPPG 459 (534)
T ss_pred CEEEEeCchhhhhhhhhhhhcccchhhhccCCCCccccccCcEEEeHHHHHhhcHHHHHHHHHHhccccccccccccchH
Confidence 5565431 25899999999999999887766442 2344467899999964
Q ss_pred ---cc-ceeecCCcccccccccccchhhhhhcccccCCCCCCcEEEEecCC-CCCCccCCCCCcccCCCCcccCCchhHH
Q 007705 458 ---YV-WWHRLPRRVNFLKNFWANTTLEASVKNHLFGADPPKLYAIHYLGL-KPWACYRDYDCNWDIGNQRVYASDVAHE 532 (592)
Q Consensus 458 ---F~-~w~~LP~rYN~l~~~~~~~~~~~~~~~~~~~~~~~~~kIIHF~G~-KPW~~~~~~dcnw~~~~~~~~asd~~~~ 532 (592)
|. +|..|+.+||.+. +.++... . ....++++||||+|. |||..... ..+++
T Consensus 460 LLaF~g~~~~LD~rWNv~g-LG~~~~v----~----~~~i~~aaILHynG~~KPWl~~~i---------------~~yr~ 515 (534)
T PLN02742 460 LLTFYGLTEPLDRRWHVLG-LGYDTNI----D----PRLIESAAVLHFNGNMKPWLKLAI---------------ERYKP 515 (534)
T ss_pred HHHHcCcceecChhheecc-ccccccc----c----hhhccCCeEEEECCCCCcccccCC---------------cccch
Confidence 76 8999999999863 2111110 0 134678999999996 99986521 13567
Q ss_pred HHHHHHHH
Q 007705 533 RWWKLHDS 540 (592)
Q Consensus 533 ~WW~vyd~ 540 (592)
.|++|.+.
T Consensus 516 ~W~kYl~~ 523 (534)
T PLN02742 516 LWERYVNY 523 (534)
T ss_pred HHHHHHcc
Confidence 88888763
No 22
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=99.75 E-value=2.8e-18 Score=189.41 Aligned_cols=157 Identities=19% Similarity=0.252 Sum_probs=112.7
Q ss_pred ccceeeeeccccc-CcceEEEEecCeeeccCchhhhCCCC----ceeecC-------------------------CCcce
Q 007705 370 EYNYSKFRLWQLT-DYDKIIFIDADIIVLRNLDLLFHFPQ----MSATGN-------------------------DIWIF 419 (592)
Q Consensus 370 ~~tytKL~iw~Lt-dYDRVLYLDaD~LVl~nIDeLFdlp~----iaAvpD-------------------------~~~yF 419 (592)
..+|.||+++++. +.+||||||+|+||.+||++||+++. ++|+.+ ..+||
T Consensus 460 ~lnY~Rf~LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVedc~~~f~r~~~ylnfs~P~i~~yFNs~aCyf 539 (657)
T PLN02910 460 MLNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVETCKESFHRFDKYLNFSNPKISENFDPNACGW 539 (657)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEecccchhhhhhhhhhccCChhhhhccCCCCcee
Confidence 3478999999975 58999999999999999999999873 444432 12467
Q ss_pred eceEEEEeCCHHHHHHHHHHHH---c-CCCCCCCCcchHH---hhcc-ceeecCCcccccccccccchhhhhhcccccCC
Q 007705 420 NSGIMVIEPSNCTFRILMSKRK---E-IVSYNGGDQGFLN---EVYV-WWHRLPRRVNFLKNFWANTTLEASVKNHLFGA 491 (592)
Q Consensus 420 NSGVMVInPs~~~fe~Lle~~~---e-~~sy~~~DQdiLN---~vF~-~w~~LP~rYN~l~~~~~~~~~~~~~~~~~~~~ 491 (592)
|+||||||...|+.+++.+... + .......|||.|| .+|. .+..|+.+||.+.-.+ ....+..
T Consensus 540 NsGVmVIDL~~WRe~nITe~ye~w~eln~~~~L~dqgsLPpgLLvF~g~i~pLD~rWNv~GLGy---------d~~v~~~ 610 (657)
T PLN02910 540 AFGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGLITFYNLTYPLDRSWHVLGLGY---------DPALNQT 610 (657)
T ss_pred ecccEEEeHHHHHHhhHHHHHHHHHHhcccccccccCCCChHHHHHhCceeecCchheecCCCC---------Ccccccc
Confidence 7799999999999877765432 2 3456779999999 5676 8999999999974221 1122234
Q ss_pred CCCCcEEEEecCC-CCCCccCCCCCcccCCCCcccCCchhHHHHHHHHHHHHHHHhhhcCC
Q 007705 492 DPPKLYAIHYLGL-KPWACYRDYDCNWDIGNQRVYASDVAHERWWKLHDSMDDKLQKFCGL 551 (592)
Q Consensus 492 ~~~~~kIIHF~G~-KPW~~~~~~dcnw~~~~~~~~asd~~~~~WW~vyd~~~e~l~~~c~l 551 (592)
..++++||||+|. |||..... ..+++.|-.|++ .....-+.|.+
T Consensus 611 ~i~~AAVLHynG~~KPWl~l~i---------------~~Yr~~W~kYl~-~d~~fl~~Cni 655 (657)
T PLN02910 611 EIENAAVVHYNGNYKPWLDLAI---------------AKYKPYWSRYVQ-YDNPYLQLCNI 655 (657)
T ss_pred cccCcEEEEeCCCCCcccccCc---------------ccchHHHHHHcc-CCChHHHhCCC
Confidence 5678999999996 99986421 235566666655 23333344554
No 23
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.66 E-value=4.5e-18 Score=174.06 Aligned_cols=199 Identities=29% Similarity=0.413 Sum_probs=136.9
Q ss_pred CCCEEEEEEeecChhhHHHHHHHHHHHHHhC-CCCcE-EEEECCCCCHHHHHHHHHcCCEEEEEeeccCcc----c----
Q 007705 294 AKREAYATVLHSSEAYVCGAITLAQSLRKTG-TKRDL-VLLIDNSISIPKREALTAAGWKIRIIKRIRNPR----A---- 363 (592)
Q Consensus 294 ~~r~AYVTlLtsdd~Yl~gAlVL~~SLr~~n-s~~dL-vVLvtd~ise~~r~~L~~~g~~Ii~V~~i~~p~----~---- 363 (592)
...+|+.+..+.-+-|+..+.++.+-|++++ ++..+ .+|.-+++++...+.|...|..+..|+++.... .
T Consensus 68 ng~~al~n~~t~~d~y~N~Tr~lv~~Lk~~~etkaKlV~vL~mkg~d~wk~d~l~ldga~~~~vq~i~~hevv~~~~di~ 147 (368)
T COG5597 68 NGDYALGNRATLRDIYLNRTRALVVVLKTGGETKAKLVEVLTMKGCDLWKTDLLPLDGAFNARVQRINVHEVVPFTKDIK 147 (368)
T ss_pred cCcccccchhhhhceeecccceehhhhhhcCcchhheeeehhhcccchhhhhccccchHHHHHhccchHhhhhhhhhccC
Confidence 3477777765444445555888888888875 34455 456677888877777776665555454443211 1
Q ss_pred ccccCCccceeeeecccccCcceEEEEecCeeeccCchhhhCCC--CceeecC---------------------------
Q 007705 364 EKKTYNEYNYSKFRLWQLTDYDKIIFIDADIIVLRNLDLLFHFP--QMSATGN--------------------------- 414 (592)
Q Consensus 364 ~~~~~~~~tytKL~iw~LtdYDRVLYLDaD~LVl~nIDeLFdlp--~iaAvpD--------------------------- 414 (592)
...+.+..+|+||++|++++||||||||+|.||++|||+||+.| +++|.+|
T Consensus 148 ~~~~rw~~mftKLrVfeqtEyDRvifLDsDaivlknmDklFd~Pvyef~a~pD~~~sp~~fhrp~~~i~~~ft~~faayg 227 (368)
T COG5597 148 PDFHRWLDMFTKLRVFEQTEYDRVIFLDSDAIVLKNMDKLFDYPVYEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAYG 227 (368)
T ss_pred cCcCcHHHHhHHHHhhhhhhhceEEEeccchHHhhhhHHHhcchhhhhccCCchhhCHHHhcCCCCccceeecHHHHhhc
Confidence 01123345899999999999999999999999999999999987 4443221
Q ss_pred ---------------------------CCcceeceEEEEeCCHHHHHHHHHHHHc--CCCCCCCCcchHHhhcc-----c
Q 007705 415 ---------------------------DIWIFNSGIMVIEPSNCTFRILMSKRKE--IVSYNGGDQGFLNEVYV-----W 460 (592)
Q Consensus 415 ---------------------------~~~yFNSGVMVInPs~~~fe~Lle~~~e--~~sy~~~DQdiLN~vF~-----~ 460 (592)
-..+||||+||++|++..+.+++..... ....+.-.|.++|-.++ -
T Consensus 228 ~~r~~ly~Pylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm~riv~~alPklydda~mmeqsllnlaYn~~g~FP 307 (368)
T COG5597 228 KMRAALYAPYLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHMLRIVWFALPKLYDDADMMEQSLLNLAYNYEGFFP 307 (368)
T ss_pred ccHhhhccccccccccCCcccccCCCcHhhhhccCceeecchHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHhhhccCc
Confidence 0238999999999999999999887632 12223346889998887 3
Q ss_pred eeecCCcccccccccccchhhhhhcccccCCCCCCcEEEEecCCCCCCcc
Q 007705 461 WHRLPRRVNFLKNFWANTTLEASVKNHLFGADPPKLYAIHYLGLKPWACY 510 (592)
Q Consensus 461 w~~LP~rYN~l~~~~~~~~~~~~~~~~~~~~~~~~~kIIHF~G~KPW~~~ 510 (592)
|.+++++|| |+|... .+.+-.+.+|+ |||+..
T Consensus 308 werld~~yN---G~wa~~------------ndlPylka~Hg---K~W~y~ 339 (368)
T COG5597 308 WERLDPRYN---GYWADA------------NDLPYLKAWHG---KPWFYT 339 (368)
T ss_pred hhhcCcccc---cccccc------------cccchHHHhhc---CcCCCC
Confidence 889999999 554221 11233456676 999964
No 24
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=98.00 E-value=1.8e-05 Score=81.77 Aligned_cols=103 Identities=17% Similarity=0.269 Sum_probs=74.1
Q ss_pred ChhhHHHHHHHHHHHHHhCCCCcEEEEEC--CCCCHHHHHHHHH-cCCEEEEEeeccCcccccccCC-ccceeeeecccc
Q 007705 306 SEAYVCGAITLAQSLRKTGTKRDLVLLID--NSISIPKREALTA-AGWKIRIIKRIRNPRAEKKTYN-EYNYSKFRLWQL 381 (592)
Q Consensus 306 dd~Yl~gAlVL~~SLr~~ns~~dLvVLvt--d~ise~~r~~L~~-~g~~Ii~V~~i~~p~~~~~~~~-~~tytKL~iw~L 381 (592)
.+.|+..+..+++.||..|++.|+-|++. ++++++.++.|.. ..+..+++..+..+........ ..-..|.++--.
T Consensus 9 g~~~~~~a~~lI~~LR~~g~~LPIEI~~~~~~dl~~~~~~~l~~~q~v~~vd~~~~~~~~~~~~~~~~~~~~~K~lA~l~ 88 (271)
T PF11051_consen 9 GDKYLWLALRLIRVLRRLGNTLPIEIIYPGDDDLSKEFCEKLLPDQDVWFVDASCVIDPDYLGKSFSKKGFQNKWLALLF 88 (271)
T ss_pred cCccHHHHHHHHHHHHHhCCCCCEEEEeCCccccCHHHHHHHhhhhhhheecceEEeeccccccccccCCchhhhhhhhh
Confidence 45899999999999999999999988876 7899999888876 3344444443332221111111 011234444445
Q ss_pred cCcceEEEEecCeeeccCchhhhCCCC
Q 007705 382 TDYDKIIFIDADIIVLRNLDLLFHFPQ 408 (592)
Q Consensus 382 tdYDRVLYLDaD~LVl~nIDeLFdlp~ 408 (592)
..++.||+||||++.++|++.||+.+.
T Consensus 89 ssFeevllLDaD~vpl~~p~~lF~~~~ 115 (271)
T PF11051_consen 89 SSFEEVLLLDADNVPLVDPEKLFESEE 115 (271)
T ss_pred CCcceEEEEcCCcccccCHHHHhcCcc
Confidence 789999999999999999999999875
No 25
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=97.59 E-value=0.00015 Score=71.34 Aligned_cols=121 Identities=19% Similarity=0.225 Sum_probs=73.4
Q ss_pred CCHHHHHHHHHcCCEEEEEeeccCccccc------ccCCccceeeeecc-cc-cCcceEEEEecCeeeccCchhhhCCC-
Q 007705 337 ISIPKREALTAAGWKIRIIKRIRNPRAEK------KTYNEYNYSKFRLW-QL-TDYDKIIFIDADIIVLRNLDLLFHFP- 407 (592)
Q Consensus 337 ise~~r~~L~~~g~~Ii~V~~i~~p~~~~------~~~~~~tytKL~iw-~L-tdYDRVLYLDaD~LVl~nIDeLFdlp- 407 (592)
.++++.+.|++.|.....+.....+.... ..+...++.|..+- .+ ...-.|+|+|+|++.++|+.++|+.+
T Consensus 11 ~D~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~dp~~~~~~~~ 90 (212)
T PF03407_consen 11 LDEETYDALEELGPPCFYFPSDASESEDSAFRFGSKAFQKLTWLKPKVLLDLLELGYDVLFSDADVVWLRDPLPYFENPD 90 (212)
T ss_pred ECHHHHHHHHhcCCCeEEEecccccccchhhhcCCHHHHHHHHHHHHHHHHHHHcCCceEEecCCEEEecCcHHhhccCC
Confidence 34677788888887765544331111111 11222345555433 22 22345999999999999999999333
Q ss_pred -CceeecC---------CCcceeceEEEEeCCHHHH---HHHHHHHHcCCCCCCCCcchHHhhcc
Q 007705 408 -QMSATGN---------DIWIFNSGIMVIEPSNCTF---RILMSKRKEIVSYNGGDQGFLNEVYV 459 (592)
Q Consensus 408 -~iaAvpD---------~~~yFNSGVMVInPs~~~f---e~Lle~~~e~~sy~~~DQdiLN~vF~ 459 (592)
.+....| .+..+|+|+|.++++..+. +...+.+.+. -...||.++|.++.
T Consensus 91 ~Di~~~~d~~~~~~~~~~~~~~n~G~~~~r~t~~~~~~~~~w~~~~~~~--~~~~DQ~~~n~~l~ 153 (212)
T PF03407_consen 91 ADILFSSDGWDGTNSDRNGNLVNTGFYYFRPTPRTIAFLEDWLERMAES--PGCWDQQAFNELLR 153 (212)
T ss_pred CceEEecCCCcccchhhcCCccccceEEEecCHHHHHHHHHHHHHHHhC--CCcchHHHHHHHHH
Confidence 2322222 1235799999999998864 4444444333 22359999999987
No 26
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=94.97 E-value=0.096 Score=57.37 Aligned_cols=135 Identities=19% Similarity=0.350 Sum_probs=81.0
Q ss_pred ceeeeecc-----cccCcceEEEEecCeeeccCchhhhCCCC--ce---ee----------cCCCcceeceEEEEeCCHH
Q 007705 372 NYSKFRLW-----QLTDYDKIIFIDADIIVLRNLDLLFHFPQ--MS---AT----------GNDIWIFNSGIMVIEPSNC 431 (592)
Q Consensus 372 tytKL~iw-----~LtdYDRVLYLDaD~LVl~nIDeLFdlp~--ia---Av----------pD~~~yFNSGVMVInPs~~ 431 (592)
.|.|+-+- ...++|=|-|||+|+||++. -|++|. +. -+ ...-..+|+|+|+|+.+.|
T Consensus 181 ~WaKlpaLR~aM~~~PeaEWiWWLDsDALImNm---sfelPlery~~~NlVihg~~~~l~~~kdW~GLNtGsFLIRNcqW 257 (429)
T PLN03182 181 FWAKLPLLRKLMLAHPEVEWIWWMDSDALFTDM---TFEIPLEKYEGYNLVIHGWDELVYDQKSWIGLNTGSFLIRNCQW 257 (429)
T ss_pred chhHHHHHHHHHHHCCCceEEEEecCCceeecC---CCCCCHhHcCCcCeeeccchhhheeccccCccceeeEEEEcCHH
Confidence 46665432 23578999999999999873 344441 10 00 0122379999999999999
Q ss_pred HHHHHHHHH--------------------HcCCCCCCCCcchHHhhcc----ce---eecCCcccccccccccch--hhh
Q 007705 432 TFRILMSKR--------------------KEIVSYNGGDQGFLNEVYV----WW---HRLPRRVNFLKNFWANTT--LEA 482 (592)
Q Consensus 432 ~fe~Lle~~--------------------~e~~sy~~~DQdiLN~vF~----~w---~~LP~rYN~l~~~~~~~~--~~~ 482 (592)
..+-|-..+ .....+...||..|-.+.. +| ..|-..|.+ .++|.... ++.
T Consensus 258 SldlLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~kv~le~~y~l-~Gyw~~iv~~yee 336 (429)
T PLN03182 258 SLDLLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDKVYLENSYYL-HGYWVGLVDRYEE 336 (429)
T ss_pred HHHHHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhccceEEeeccee-ccccHHHHHHHHH
Confidence 654442211 1123456789999988874 46 357777755 45554321 111
Q ss_pred ---hhcccccCCCCCCcEEEEecCCCCCCccCC
Q 007705 483 ---SVKNHLFGADPPKLYAIHYLGLKPWACYRD 512 (592)
Q Consensus 483 ---~~~~~~~~~~~~~~kIIHF~G~KPW~~~~~ 512 (592)
.++.. + .+..-|.|.||+|-||-....+
T Consensus 337 ~~~~~~~g-~-gd~rwPfvtHF~GckpC~~~~~ 367 (429)
T PLN03182 337 MMEKYHPG-L-GDDRWPFVTHFVGCKPCGGYGD 367 (429)
T ss_pred HHHhcCCC-C-CCcccceeEeeccceecCCCCC
Confidence 11111 0 1234589999999999865543
No 27
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=93.94 E-value=0.22 Score=60.71 Aligned_cols=176 Identities=21% Similarity=0.182 Sum_probs=109.4
Q ss_pred EEEEEEeecChhhHHHHHHHHHHHHHh-CCCCcEEEEECCCCCHHHHHH----HHHcCCEEEEEeeccCcccc---cc-c
Q 007705 297 EAYATVLHSSEAYVCGAITLAQSLRKT-GTKRDLVLLIDNSISIPKREA----LTAAGWKIRIIKRIRNPRAE---KK-T 367 (592)
Q Consensus 297 ~AYVTlLtsdd~Yl~gAlVL~~SLr~~-ns~~dLvVLvtd~ise~~r~~----L~~~g~~Ii~V~~i~~p~~~---~~-~ 367 (592)
..=+.-+++.+-|=.-..+++.|+.+| ++...|-+| .+-+|+..++. -++++.+..-|+. .-|..- +. .
T Consensus 1181 vINIFSvASGHLYERflrIMm~SvlknTktpVKFWfL-kNyLSPtFKe~iP~mA~eYnFeyElv~Y-kWPrWLhqQ~EKQ 1258 (1470)
T KOG1879|consen 1181 VINIFSVASGHLYERFLRIMMLSVLKNTKTPVKFWFL-KNYLSPTFKESIPHMAKEYNFEYELVQY-KWPRWLHQQTEKQ 1258 (1470)
T ss_pred eEEEEeeccccHHHHHHHHHHHHHHhCCCCceeEEee-hhhcChHHHHHHHHHHHHhCceEEEEEe-cCchhhhhhhhhh
Confidence 344555677889999999999999886 455555554 34666654433 3356766665542 122211 00 1
Q ss_pred CCccceeeeecccc--cCcceEEEEecCeeeccCchhhhCCCCcee----ec--------C---------------CCcc
Q 007705 368 YNEYNYSKFRLWQL--TDYDKIIFIDADIIVLRNLDLLFHFPQMSA----TG--------N---------------DIWI 418 (592)
Q Consensus 368 ~~~~tytKL~iw~L--tdYDRVLYLDaD~LVl~nIDeLFdlp~iaA----vp--------D---------------~~~y 418 (592)
.-.|.|--|++==| ...+||||.|||-||..||+||.+++.-+| +| | ...|
T Consensus 1259 RiiWgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfdl~GaPygYtPfCdsR~EMDGyRFWK~GYW~~hL~grkY 1338 (1470)
T KOG1879|consen 1259 RIIWGYKILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFDLGGAPYGYTPFCDSRREMDGYRFWKQGYWKKHLRGRKY 1338 (1470)
T ss_pred hhhhhhhhhhhhhccccccceEEEEcchHhhhhhhHHHHhcccCCCccccCccccccccccchhHHhhhHHHHHhccCcc
Confidence 11233433443333 368999999999999999999999874222 22 1 1236
Q ss_pred eeceEEEEeCCHHHH----HHHHHH---HH-cCCCCCCCCcchHHhhcc--ceeecCCcccccccc
Q 007705 419 FNSGIMVIEPSNCTF----RILMSK---RK-EIVSYNGGDQGFLNEVYV--WWHRLPRRVNFLKNF 474 (592)
Q Consensus 419 FNSGVMVInPs~~~f----e~Lle~---~~-e~~sy~~~DQdiLN~vF~--~w~~LP~rYN~l~~~ 474 (592)
-=|.+.|++..+-+. +++.-+ +. +..+...-|||+=|.+-. -+..||-.|=+..+.
T Consensus 1339 HISALYVVDLkrFReiaAGDrLR~qYQ~LS~DPNSLsNLDQDLPNnm~hqVpIkSLPqeWLWCETW 1404 (1470)
T KOG1879|consen 1339 HISALYVVDLKRFREIAAGDRLRGQYQALSQDPNSLSNLDQDLPNNMQHQVPIKSLPQEWLWCETW 1404 (1470)
T ss_pred ccceeeeeeHHHHHhcccchHHHHHHHhhcCCcchhhhccccccccceeecccccCCcchhhhhhh
Confidence 678888888765432 223222 11 244666779999999987 578899887655444
No 28
>PLN03181 glycosyltransferase; Provisional
Probab=92.99 E-value=0.19 Score=55.24 Aligned_cols=100 Identities=17% Similarity=0.299 Sum_probs=62.1
Q ss_pred ceeeeecc-----cccCcceEEEEecCeeeccCchhhhCCC-----Cce----eec------CCCcceeceEEEEeCCHH
Q 007705 372 NYSKFRLW-----QLTDYDKIIFIDADIIVLRNLDLLFHFP-----QMS----ATG------NDIWIFNSGIMVIEPSNC 431 (592)
Q Consensus 372 tytKL~iw-----~LtdYDRVLYLDaD~LVl~nIDeLFdlp-----~ia----Avp------D~~~yFNSGVMVInPs~~ 431 (592)
.|.|+-+- ...+++-|-|||+|+||++. -|.+| .+. .-+ ..-..||+|+++|+.+.|
T Consensus 182 ~WaKipalRaAM~a~PeAEWfWWLDsDALIMNp---~~sLPl~ry~~~NLvvhg~p~~vy~~qdw~GlN~GsFLIRNcqW 258 (453)
T PLN03181 182 YWAKLPVVRAAMLAHPEAEWIWWVDSDAVFTDM---DFKLPLHRYRDHNLVVHGWPKLIYEKRSWTALNAGVFLIRNCQW 258 (453)
T ss_pred hhhHHHHHHHHHHHCCCceEEEEecCCceeecC---CCCCCHhhcCCccccccCCcccccccccccccceeeeEEecCHH
Confidence 46666433 34679999999999999975 12222 111 001 123479999999999999
Q ss_pred HHHHHHHHH--------------------HcCCCCCCCCcchHHhhcc----cee---ecCCccccccccc
Q 007705 432 TFRILMSKR--------------------KEIVSYNGGDQGFLNEVYV----WWH---RLPRRVNFLKNFW 475 (592)
Q Consensus 432 ~fe~Lle~~--------------------~e~~sy~~~DQdiLN~vF~----~w~---~LP~rYN~l~~~~ 475 (592)
..+-|-... .....+.-.||..|-.+.- +|. .|-..|.++ ++|
T Consensus 259 Sl~LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLvyll~~~~~~w~~k~ylE~~yy~~-GyW 328 (453)
T PLN03181 259 SLDFMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALVYLLYKHKEKWGDKIYLEGEYYFE-GYW 328 (453)
T ss_pred HHHHHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHHHHHHhccchhccceeeecceeee-eeH
Confidence 654332221 1122345689999987754 463 577777664 444
No 29
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=92.06 E-value=0.089 Score=53.81 Aligned_cols=87 Identities=14% Similarity=0.226 Sum_probs=16.8
Q ss_pred ceeeeeccc-----ccCcceEEEEecCeeeccCchhh---hC----CCC-------------c-e--ee--c--------
Q 007705 372 NYSKFRLWQ-----LTDYDKIIFIDADIIVLRNLDLL---FH----FPQ-------------M-S--AT--G-------- 413 (592)
Q Consensus 372 tytKL~iw~-----LtdYDRVLYLDaD~LVl~nIDeL---Fd----lp~-------------i-a--Av--p-------- 413 (592)
+|.|+.+-+ ..+++=|.|||+|++|+..=-+| +- ++. . . .. +
T Consensus 60 ~W~K~~~lr~~m~~~P~~~wv~~lD~Dali~n~~~~L~~~il~p~~L~~~~~r~~~~~p~~~~~~~~~~~~~~~~~li~t 139 (239)
T PF05637_consen 60 SWAKIPALRAAMKKYPEAEWVWWLDSDALIMNPDFSLEEHILSPSRLDSLLLRDVPIVPPDSIIKTYSVIDGNDIHLIIT 139 (239)
T ss_dssp HHTHHHHHHHHHHH-TT-SEEEEE-TTEEE--------------------------------------------------
T ss_pred hhHHHHHHHHHHHhCCCCCEEEEEcCCeEEEecccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 477764432 25679999999999999843222 21 000 0 0 00 0
Q ss_pred CCCcceeceEEEEeCCHHHHHHHHHHHHc----CCC---CCCCCcchHHhhcc
Q 007705 414 NDIWIFNSGIMVIEPSNCTFRILMSKRKE----IVS---YNGGDQGFLNEVYV 459 (592)
Q Consensus 414 D~~~yFNSGVMVInPs~~~fe~Lle~~~e----~~s---y~~~DQdiLN~vF~ 459 (592)
.....+|+|+|+++.+.|... +++...+ ... ..+.||+.|-.+++
T Consensus 140 ~d~~gLNtGsFliRns~ws~~-fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~ 191 (239)
T PF05637_consen 140 QDWNGLNTGSFLIRNSPWSRD-FLDAWADPLYRNYDWDQLEFDEQSALEHLLQ 191 (239)
T ss_dssp -----------------------------------------------------
T ss_pred ccccccccccccccccccccc-ccccccccccccccccccccccccccccccc
Confidence 123479999999999999763 4444322 111 23679999988887
No 30
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=90.49 E-value=0.27 Score=53.43 Aligned_cols=148 Identities=16% Similarity=0.139 Sum_probs=79.4
Q ss_pred HHHHHHHHhCCCCcEEEEECC-CCC--HHHHHHHHHcCCEEEEEeeccCcccccccC-----------Cccceeeeeccc
Q 007705 315 TLAQSLRKTGTKRDLVLLIDN-SIS--IPKREALTAAGWKIRIIKRIRNPRAEKKTY-----------NEYNYSKFRLWQ 380 (592)
Q Consensus 315 VL~~SLr~~ns~~dLvVLvtd-~is--e~~r~~L~~~g~~Ii~V~~i~~p~~~~~~~-----------~~~tytKL~iw~ 380 (592)
-.+.|+.++++...++|+... +.+ ....+-+-..|.+++.+.+.. |+..++.. ......+.+...
T Consensus 148 ~sIESa~k~hP~~cv~vls~t~ds~~~~s~~kp~~~~~lsv~~v~~~l-p~llk~t~~e~~l~~~k~g~~~~~~~~l~~~ 226 (409)
T KOG1928|consen 148 CSIESAFKTHPEGCVVVLSKTMDSPNGYSILKPFLDSGLSVIAVTPDL-PFLLKDTPGETWLERWKDGRLDPGKIPLLQN 226 (409)
T ss_pred hhhHHHHhhCCCceEEEEEccccCCCCccccccHhHhhhhhcccccCc-hhhHhhCccccHHHHHHhcccCCCcccchhh
Confidence 467899999999999887531 111 122333444455555544321 11111000 000011112221
Q ss_pred ccCcce--------EEEEecCeeeccCchhhhCCCCceeecCCCcceeceEEEEeCCHH-HHHHHHHHHHcCCCCCCCCc
Q 007705 381 LTDYDK--------IIFIDADIIVLRNLDLLFHFPQMSATGNDIWIFNSGIMVIEPSNC-TFRILMSKRKEIVSYNGGDQ 451 (592)
Q Consensus 381 LtdYDR--------VLYLDaD~LVl~nIDeLFdlp~iaAvpD~~~yFNSGVMVInPs~~-~fe~Lle~~~e~~sy~~~DQ 451 (592)
+.+.-| =||||+|+||++||..|=+.=...++.....+.|.+||.+.+... ..+.|-|+......-.+|-|
T Consensus 227 lSdl~RLA~LyKYGGvYLDTDvIvLksl~~l~N~ig~~~~~~~~~~lnnavl~F~k~Hpfl~~cl~eF~~tfNg~~WG~N 306 (409)
T KOG1928|consen 227 LSDLSRLALLYKYGGVYLDTDVIVLKSLSNLRNVIGVDPATQAWTRLNNAVLIFDKNHPFLLECLREFALTYNGNIWGHN 306 (409)
T ss_pred HHHHHHHHHHHHhCCEEeeccEEEecccccccccccccchhhHHHhhcCceeecCCCCHHHHHHHHHHHHhccccccccC
Confidence 222111 279999999999999887521111221234589999999998776 44555566655433334444
Q ss_pred --chHHhhccceee
Q 007705 452 --GFLNEVYVWWHR 463 (592)
Q Consensus 452 --diLN~vF~~w~~ 463 (592)
+++.-++++|..
T Consensus 307 GP~LvTRVakr~c~ 320 (409)
T KOG1928|consen 307 GPYLVTRVAKRWCN 320 (409)
T ss_pred CcHHHHHHHHHHhC
Confidence 477777775543
No 31
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=66.78 E-value=13 Score=37.80 Aligned_cols=78 Identities=23% Similarity=0.382 Sum_probs=53.4
Q ss_pred ccCcceEEEEecCeeeccC---chhhhCCCCceee--cC-CCcceeceEEEEeCCHHHHHHHHHHHH-c---CCCCCCCC
Q 007705 381 LTDYDKIIFIDADIIVLRN---LDLLFHFPQMSAT--GN-DIWIFNSGIMVIEPSNCTFRILMSKRK-E---IVSYNGGD 450 (592)
Q Consensus 381 LtdYDRVLYLDaD~LVl~n---IDeLFdlp~iaAv--pD-~~~yFNSGVMVInPs~~~fe~Lle~~~-e---~~sy~~~D 450 (592)
|.+||=|++||+|+-|..+ |.+..+- .+.-+ .. ..+-+.+|--+++.+.+.-+-|.+++. + ..++.|.|
T Consensus 39 L~~~~~vlflDaDigVvNp~~~iEefid~-~~Di~fydR~~n~Ei~agsYlvkNT~~~~~fl~~~a~~E~~lP~sfhGtD 117 (222)
T PF03314_consen 39 LPEYDWVLFLDADIGVVNPNRRIEEFIDE-GYDIIFYDRFFNWEIAAGSYLVKNTEYSRDFLKEWADYEFKLPNSFHGTD 117 (222)
T ss_pred hccCCEEEEEcCCceeecCcccHHHhcCC-CCcEEEEecccchhhhhccceeeCCHHHHHHHHHHhhhCccCCCccccCc
Confidence 4679999999999999976 3443321 11111 01 235577888899999988777776654 1 34778999
Q ss_pred cchHHhhcc
Q 007705 451 QGFLNEVYV 459 (592)
Q Consensus 451 QdiLN~vF~ 459 (592)
-|.|..+..
T Consensus 118 NGAlH~~L~ 126 (222)
T PF03314_consen 118 NGALHIFLA 126 (222)
T ss_pred cHHHHHHHH
Confidence 998887765
No 32
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=64.74 E-value=18 Score=38.07 Aligned_cols=165 Identities=9% Similarity=0.064 Sum_probs=85.7
Q ss_pred CCCCEEEEEEeecChhhHHHHHHHHHHHHHh---CCCCcEEEEECCCC--CHHHHHHHHHcCCEEEEEeeccCccccccc
Q 007705 293 IAKREAYATVLHSSEAYVCGAITLAQSLRKT---GTKRDLVLLIDNSI--SIPKREALTAAGWKIRIIKRIRNPRAEKKT 367 (592)
Q Consensus 293 ~~~r~AYVTlLtsdd~Yl~gAlVL~~SLr~~---ns~~dLvVLvtd~i--se~~r~~L~~~g~~Ii~V~~i~~p~~~~~~ 367 (592)
-..+.+...+ ++ ..|..-.--...|-.++ +.+...+|+.+... +.-....+ ...+++.|.. ...
T Consensus 32 ~n~tIgl~vf-at-GkY~~f~~~F~~SAEk~Fm~g~~v~YyVFTD~~~~~p~v~lg~~--r~~~V~~v~~-------~~~ 100 (271)
T cd02515 32 QNITIGLTVF-AV-GKYTEFLERFLESAEKHFMVGYRVIYYIFTDKPAAVPEVELGPG--RRLTVLKIAE-------ESR 100 (271)
T ss_pred cCCEEEEEEE-Ee-ccHHHHHHHHHHHHHHhccCCCeeEEEEEeCCcccCcccccCCC--ceeEEEEecc-------ccC
Confidence 3344554444 33 37888777778888776 44445556654321 11000000 1123333310 111
Q ss_pred CCccceeeeecc-----cc--cCcceEEEEecCeeeccCch-hhhCCCCce----------------------e--ec-C
Q 007705 368 YNEYNYSKFRLW-----QL--TDYDKIIFIDADIIVLRNLD-LLFHFPQMS----------------------A--TG-N 414 (592)
Q Consensus 368 ~~~~tytKL~iw-----~L--tdYDRVLYLDaD~LVl~nID-eLFdlp~ia----------------------A--vp-D 414 (592)
+...+..|+.++ ++ -++|-+.++|+|+++.+++. |.+. +.++ + .| +
T Consensus 101 W~~~sl~Rm~~~~~~~~~~~~~e~DYlF~~dvd~~F~~~ig~E~Lg-~lva~lHp~~y~~~~~~fpYERrp~S~AyIp~~ 179 (271)
T cd02515 101 WQDISMRRMKTLADHIADRIGHEVDYLFCMDVDMVFQGPFGVETLG-DSVAQLHPWWYGKPRKQFPYERRPSSAAYIPEG 179 (271)
T ss_pred CcHHHHHHHHHHHHHHHHhhcccCCEEEEeeCCceEeecCCHHHhh-hhheecChhhhcCCCCCCCCcCCCCccccccCC
Confidence 223355555555 22 37999999999999999875 3322 1111 0 11 1
Q ss_pred CC-cceeceEEEEeCCHHHHHHHHHHHH--------cCCCCCCCCcchHHhhcc--c-eeecCCccccc
Q 007705 415 DI-WIFNSGIMVIEPSNCTFRILMSKRK--------EIVSYNGGDQGFLNEVYV--W-WHRLPRRVNFL 471 (592)
Q Consensus 415 ~~-~yFNSGVMVInPs~~~fe~Lle~~~--------e~~sy~~~DQdiLN~vF~--~-w~~LP~rYN~l 471 (592)
.| -|+-+|+.-=. ...+-+|.+.+. +.-.-.+.|..-||.+|- + .+.||+.|+..
T Consensus 180 eGdfYy~Ga~~GG~--~~~vl~l~~~c~~~i~~D~~n~I~A~wHDESHLNkYf~~~Kp~KiLSPeY~w~ 246 (271)
T cd02515 180 EGDFYYHGAVFGGS--VEEVYRLTRACHEGILADKANGIEARWHDESHLNKYFLLHKPTKVLSPEYLWD 246 (271)
T ss_pred CCCeEEeeeecCcc--HHHHHHHHHHHHHHHHHHHhCCceEEeecHhHhHHHHhhCCCCeecChhhcCC
Confidence 22 25555543222 223333333332 111235789999999997 3 67899998874
No 33
>PF07801 DUF1647: Protein of unknown function (DUF1647); InterPro: IPR012444 This entry consists of hypothetical proteins of unknown function.
Probab=64.60 E-value=38 Score=32.46 Aligned_cols=65 Identities=15% Similarity=0.175 Sum_probs=50.4
Q ss_pred CCCCCCEEEEEEeecChhhHHHHHHHHHHHHHhCCCCcEEEEECCCCCHHHHHHHHHc--CCEEEEEeec
Q 007705 291 TKIAKREAYATVLHSSEAYVCGAITLAQSLRKTGTKRDLVLLIDNSISIPKREALTAA--GWKIRIIKRI 358 (592)
Q Consensus 291 ~~~~~r~AYVTlLtsdd~Yl~gAlVL~~SLr~~ns~~dLvVLvtd~ise~~r~~L~~~--g~~Ii~V~~i 358 (592)
....+..++||.. ++++...+.-+++||+++.++.++ ||++=++++...+.|++. +.+++..+.-
T Consensus 56 ~~n~~~vvfVSa~--S~~h~~~~~~~i~si~~~~P~~k~-ilY~LgL~~~~i~~L~~~~~n~evr~Fn~s 122 (142)
T PF07801_consen 56 SKNSSDVVFVSAT--SDNHFNESMKSISSIRKFYPNHKI-ILYDLGLSEEQIKKLKKNFCNVEVRKFNFS 122 (142)
T ss_pred cccCCccEEEEEe--cchHHHHHHHHHHHHHHHCCCCcE-EEEeCCCCHHHHHHHHhcCCceEEEECCCc
Confidence 3466778899864 678999999999999999888774 567778999999999873 5666655443
No 34
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=63.49 E-value=16 Score=35.50 Aligned_cols=80 Identities=20% Similarity=0.154 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhCC---CCcEEEEECCCCCHHHHHHHHHcCCEEEEEeeccCcccccccCCccceeeeecccccCcceEEE
Q 007705 313 AITLAQSLRKTGT---KRDLVLLIDNSISIPKREALTAAGWKIRIIKRIRNPRAEKKTYNEYNYSKFRLWQLTDYDKIIF 389 (592)
Q Consensus 313 AlVL~~SLr~~ns---~~dLvVLvtd~ise~~r~~L~~~g~~Ii~V~~i~~p~~~~~~~~~~tytKL~iw~LtdYDRVLY 389 (592)
+.-++.|+.+... ++.++ +++++-+++..+.+++...+...+..+..+.... ....-...+..++|-+++
T Consensus 15 l~~~l~sl~~q~~~~~~~evi-vvd~~s~d~~~~~~~~~~~~~~~v~~i~~~~~~~------~~a~N~g~~~a~~d~v~~ 87 (249)
T cd02525 15 IEELLESLLNQSYPKDLIEII-VVDGGSTDGTREIVQEYAAKDPRIRLIDNPKRIQ------SAGLNIGIRNSRGDIIIR 87 (249)
T ss_pred HHHHHHHHHhccCCCCccEEE-EEeCCCCccHHHHHHHHHhcCCeEEEEeCCCCCc------hHHHHHHHHHhCCCEEEE
Confidence 3455677776543 33444 4455555555555555442211122222221110 011112333447899999
Q ss_pred EecCeeeccC
Q 007705 390 IDADIIVLRN 399 (592)
Q Consensus 390 LDaD~LVl~n 399 (592)
||+|.++..+
T Consensus 88 lD~D~~~~~~ 97 (249)
T cd02525 88 VDAHAVYPKD 97 (249)
T ss_pred ECCCccCCHH
Confidence 9999987544
No 35
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=61.14 E-value=25 Score=31.47 Aligned_cols=107 Identities=16% Similarity=0.174 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHhCC-CCcEEEEECCCCCHHHHHHHHHcCCEEEEEeeccCcccccccCCccceeeeecccccCcceEEE
Q 007705 311 CGAITLAQSLRKTGT-KRDLVLLIDNSISIPKREALTAAGWKIRIIKRIRNPRAEKKTYNEYNYSKFRLWQLTDYDKIIF 389 (592)
Q Consensus 311 ~gAlVL~~SLr~~ns-~~dLvVLvtd~ise~~r~~L~~~g~~Ii~V~~i~~p~~~~~~~~~~tytKL~iw~LtdYDRVLY 389 (592)
....-++.||..... ... +++++++-+++..+.+++....+..+. .+... .....+-.+.+..+++-+++
T Consensus 10 ~~l~~~l~sl~~~~~~~~~-iiivdd~s~~~~~~~~~~~~~~~~~~~---~~~~~-----g~~~a~n~~~~~~~~~~i~~ 80 (166)
T cd04186 10 EYLKACLDSLLAQTYPDFE-VIVVDNASTDGSVELLRELFPEVRLIR---NGENL-----GFGAGNNQGIREAKGDYVLL 80 (166)
T ss_pred HHHHHHHHHHHhccCCCeE-EEEEECCCCchHHHHHHHhCCCeEEEe---cCCCc-----ChHHHhhHHHhhCCCCEEEE
Confidence 334567777776543 334 444555555666666766553222221 11100 01112223444458999999
Q ss_pred EecCeeeccC-chhhhC----CCCceeecCCCcceeceEEEEeCC
Q 007705 390 IDADIIVLRN-LDLLFH----FPQMSATGNDIWIFNSGIMVIEPS 429 (592)
Q Consensus 390 LDaD~LVl~n-IDeLFd----lp~iaAvpD~~~yFNSGVMVInPs 429 (592)
+|+|..+..+ +..+.+ .+..+++... +.++.++++.+
T Consensus 81 ~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 122 (166)
T cd04186 81 LNPDTVVEPGALLELLDAAEQDPDVGIVGPK---VSGAFLLVRRE 122 (166)
T ss_pred ECCCcEECccHHHHHHHHHHhCCCceEEEcc---CceeeEeeeHH
Confidence 9999998765 333332 1233333211 66677777644
No 36
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=59.66 E-value=14 Score=32.72 Aligned_cols=88 Identities=22% Similarity=0.297 Sum_probs=45.3
Q ss_pred ChhhHHHHHHHHHHHHHh-CCCCcEEEEECCCCCHHHHHHHHHc---CCEEEEEeeccCcccccccCCccceeeeecccc
Q 007705 306 SEAYVCGAITLAQSLRKT-GTKRDLVLLIDNSISIPKREALTAA---GWKIRIIKRIRNPRAEKKTYNEYNYSKFRLWQL 381 (592)
Q Consensus 306 dd~Yl~gAlVL~~SLr~~-ns~~dLvVLvtd~ise~~r~~L~~~---g~~Ii~V~~i~~p~~~~~~~~~~tytKL~iw~L 381 (592)
...|+. -++.||++. .....++| ++++-++++.+.+++. +..+..+..-.+- .....+-...+.
T Consensus 9 ~~~~l~---~~l~sl~~q~~~~~eiiv-vdd~s~d~~~~~~~~~~~~~~~i~~i~~~~n~--------g~~~~~n~~~~~ 76 (169)
T PF00535_consen 9 EAEYLE---RTLESLLKQTDPDFEIIV-VDDGSTDETEEILEEYAESDPNIRYIRNPENL--------GFSAARNRGIKH 76 (169)
T ss_dssp -TTTHH---HHHHHHHHHSGCEEEEEE-EECS-SSSHHHHHHHHHCCSTTEEEEEHCCCS--------HHHHHHHHHHHH
T ss_pred CHHHHH---HHHHHHhhccCCCEEEEE-eccccccccccccccccccccccccccccccc--------cccccccccccc
Confidence 345555 455666655 33344444 4444466666667665 3333333221110 111122234555
Q ss_pred cCcceEEEEecCeeeccC-chhhhC
Q 007705 382 TDYDKIIFIDADIIVLRN-LDLLFH 405 (592)
Q Consensus 382 tdYDRVLYLDaD~LVl~n-IDeLFd 405 (592)
...+-|+++|+|.++..+ +..|.+
T Consensus 77 a~~~~i~~ld~D~~~~~~~l~~l~~ 101 (169)
T PF00535_consen 77 AKGEYILFLDDDDIISPDWLEELVE 101 (169)
T ss_dssp --SSEEEEEETTEEE-TTHHHHHHH
T ss_pred cceeEEEEeCCCceEcHHHHHHHHH
Confidence 677899999999999988 666664
No 37
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=58.20 E-value=21 Score=35.08 Aligned_cols=98 Identities=13% Similarity=0.098 Sum_probs=49.8
Q ss_pred CCCCCCEEEEEEeecChhhHHHHHHHHHHHHHhC-CC--CcEEEEECCCCCHHHHHHHHHcCCEEEEEeeccCccccccc
Q 007705 291 TKIAKREAYATVLHSSEAYVCGAITLAQSLRKTG-TK--RDLVLLIDNSISIPKREALTAAGWKIRIIKRIRNPRAEKKT 367 (592)
Q Consensus 291 ~~~~~r~AYVTlLtsdd~Yl~gAlVL~~SLr~~n-s~--~dLvVLvtd~ise~~r~~L~~~g~~Ii~V~~i~~p~~~~~~ 367 (592)
....++.+.+...+..+.+ ...+++||.... ++ ..+ ++++|+-++.+.+.+++.... .+..+..+... +
T Consensus 25 ~~~~~~isVvip~~n~~~~---l~~~l~si~~q~~~~~~~ei-ivvdd~s~d~t~~~~~~~~~~--~v~~i~~~~~~-g- 96 (251)
T cd06439 25 PAYLPTVTIIIPAYNEEAV---IEAKLENLLALDYPRDRLEI-IVVSDGSTDGTAEIAREYADK--GVKLLRFPERR-G- 96 (251)
T ss_pred CCCCCEEEEEEecCCcHHH---HHHHHHHHHhCcCCCCcEEE-EEEECCCCccHHHHHHHHhhC--cEEEEEcCCCC-C-
Confidence 3445566666665544444 345667776543 23 334 444555555666666665422 11111111100 0
Q ss_pred CCccceeeeecccccCcceEEEEecCeeeccC
Q 007705 368 YNEYNYSKFRLWQLTDYDKIIFIDADIIVLRN 399 (592)
Q Consensus 368 ~~~~tytKL~iw~LtdYDRVLYLDaD~LVl~n 399 (592)
....+-...+....|-|+++|+|+++..+
T Consensus 97 ---~~~a~n~gi~~a~~d~i~~lD~D~~~~~~ 125 (251)
T cd06439 97 ---KAAALNRALALATGEIVVFTDANALLDPD 125 (251)
T ss_pred ---hHHHHHHHHHHcCCCEEEEEccccCcCHH
Confidence 01111122333456999999999999754
No 38
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=57.96 E-value=28 Score=29.88 Aligned_cols=83 Identities=16% Similarity=0.089 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHhCC-CCcEEEEECCCCCHHHHHHHHHcCCE---EEEEeeccCcccccccCCccceeeeecccccCcc
Q 007705 310 VCGAITLAQSLRKTGT-KRDLVLLIDNSISIPKREALTAAGWK---IRIIKRIRNPRAEKKTYNEYNYSKFRLWQLTDYD 385 (592)
Q Consensus 310 l~gAlVL~~SLr~~ns-~~dLvVLvtd~ise~~r~~L~~~g~~---Ii~V~~i~~p~~~~~~~~~~tytKL~iw~LtdYD 385 (592)
......++.|+.+.+. .+.+++ ++++-+++..+.+.+.... +..+...... . ....+-.+....++|
T Consensus 9 ~~~l~~~l~s~~~~~~~~~~i~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g-------~~~~~~~~~~~~~~d 79 (156)
T cd00761 9 EPYLERCLESLLAQTYPNFEVIV-VDDGSTDGTLEILEEYAKKDPRVIRVINEENQ-G-------LAAARNAGLKAARGE 79 (156)
T ss_pred HHHHHHHHHHHHhCCccceEEEE-EeCCCCccHHHHHHHHHhcCCCeEEEEecCCC-C-------hHHHHHHHHHHhcCC
Confidence 3455677788887653 445554 4444455555555544322 2221111110 0 011112233334789
Q ss_pred eEEEEecCeeeccCch
Q 007705 386 KIIFIDADIIVLRNLD 401 (592)
Q Consensus 386 RVLYLDaD~LVl~nID 401 (592)
.++++|+|.++..+.-
T Consensus 80 ~v~~~d~D~~~~~~~~ 95 (156)
T cd00761 80 YILFLDADDLLLPDWL 95 (156)
T ss_pred EEEEECCCCccCccHH
Confidence 9999999999977643
No 39
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=57.67 E-value=12 Score=38.95 Aligned_cols=51 Identities=24% Similarity=0.446 Sum_probs=38.5
Q ss_pred ccCcceEEEEecCeeeccCchhhhCCCCceeec---CCCcceeceEEEEeCCHH
Q 007705 381 LTDYDKIIFIDADIIVLRNLDLLFHFPQMSATG---NDIWIFNSGIMVIEPSNC 431 (592)
Q Consensus 381 LtdYDRVLYLDaD~LVl~nIDeLFdlp~iaAvp---D~~~yFNSGVMVInPs~~ 431 (592)
+..-+-+||||+|||+.+.+.-|+.-+.+|.-. |+....-.|.+++|.+..
T Consensus 208 is~~~GCIYLD~DMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsnH 261 (326)
T PRK15382 208 ISPCEGCIYLDADMIITDKLGVLYAPDGIAVHVDCNDDSKSLENGAIVVNRSNH 261 (326)
T ss_pred cCCCCceEEeecceeeecccccEEcCCceEEEEEecCCccccccceEEEccCCC
Confidence 344678999999999999999999888776432 233456668888887754
No 40
>PRK15384 type III secretion system protein; Provisional
Probab=57.21 E-value=12 Score=39.02 Aligned_cols=51 Identities=20% Similarity=0.361 Sum_probs=38.5
Q ss_pred ccCcceEEEEecCeeeccCchhhhCCCCceeec---CCCcceeceEEEEeCCHH
Q 007705 381 LTDYDKIIFIDADIIVLRNLDLLFHFPQMSATG---NDIWIFNSGIMVIEPSNC 431 (592)
Q Consensus 381 LtdYDRVLYLDaD~LVl~nIDeLFdlp~iaAvp---D~~~yFNSGVMVInPs~~ 431 (592)
+..-+-+||||+|||+.+.+.-|+.-+.++.-. |.....-.|.+++|.|..
T Consensus 213 is~~~GCIYLDaDMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsnH 266 (336)
T PRK15384 213 LSTNSGCIYLDADMIITEKLGGIYIPDGIAVHVERIDGRASMENGIIAVDRNNH 266 (336)
T ss_pred cCCCCceEEeeccceeecccccEEcCCceEEEEEecCCceecccceEEEccCCC
Confidence 344678999999999999999999888776432 233456668888887754
No 41
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=57.04 E-value=27 Score=30.75 Aligned_cols=80 Identities=15% Similarity=0.124 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHhC-CCCcEEEEECCCCCHHHHHHHHHcCCE----EEEEeeccCcccccccCCccceeeeecccccCcc
Q 007705 311 CGAITLAQSLRKTG-TKRDLVLLIDNSISIPKREALTAAGWK----IRIIKRIRNPRAEKKTYNEYNYSKFRLWQLTDYD 385 (592)
Q Consensus 311 ~gAlVL~~SLr~~n-s~~dLvVLvtd~ise~~r~~L~~~g~~----Ii~V~~i~~p~~~~~~~~~~tytKL~iw~LtdYD 385 (592)
....-++.||.... ...+++| ++++-++.+.+.+++.... +..+..-. ... . .-.+-...+...++
T Consensus 10 ~~l~~~l~sl~~q~~~~~~iiv-vdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~-~~g-~------~~~~n~~~~~~~~~ 80 (180)
T cd06423 10 AVIERTIESLLALDYPKLEVIV-VDDGSTDDTLEILEELAALYIRRVLVVRDKE-NGG-K------AGALNAGLRHAKGD 80 (180)
T ss_pred HHHHHHHHHHHhCCCCceEEEE-EeCCCccchHHHHHHHhccccceEEEEEecc-cCC-c------hHHHHHHHHhcCCC
Confidence 34445667877654 3445444 4555555555555554321 21111111 100 0 01111233334789
Q ss_pred eEEEEecCeeeccC
Q 007705 386 KIIFIDADIIVLRN 399 (592)
Q Consensus 386 RVLYLDaD~LVl~n 399 (592)
-|+++|+|.++..+
T Consensus 81 ~i~~~D~D~~~~~~ 94 (180)
T cd06423 81 IVVVLDADTILEPD 94 (180)
T ss_pred EEEEECCCCCcChH
Confidence 99999999998765
No 42
>PRK15383 type III secretion system protein; Provisional
Probab=55.56 E-value=13 Score=38.59 Aligned_cols=51 Identities=20% Similarity=0.332 Sum_probs=38.4
Q ss_pred ccCcceEEEEecCeeeccCchhhhCCCCceeec---CCCcceeceEEEEeCCHH
Q 007705 381 LTDYDKIIFIDADIIVLRNLDLLFHFPQMSATG---NDIWIFNSGIMVIEPSNC 431 (592)
Q Consensus 381 LtdYDRVLYLDaD~LVl~nIDeLFdlp~iaAvp---D~~~yFNSGVMVInPs~~ 431 (592)
+..-+-+||||+|||+.+.+.-|+.-|.++.-. |.....-.|.+++|.+..
T Consensus 216 is~~~GCIYLD~DMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsnH 269 (335)
T PRK15383 216 LQPGGGCIYLDADMLLTDKLGTLYLPDGIAIHVSRKDNHVSLENGIIAVNRSEH 269 (335)
T ss_pred cCCCCceEEeecceeeecccccEEcCCceEEEEEecCCceecccceEEEccCCC
Confidence 344578999999999999999999888776432 233456668888887754
No 43
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=46.47 E-value=10 Score=33.28 Aligned_cols=24 Identities=17% Similarity=0.160 Sum_probs=18.6
Q ss_pred HHHHHHHHHhCCCCcEEEEECCCC
Q 007705 314 ITLAQSLRKTGTKRDLVLLIDNSI 337 (592)
Q Consensus 314 lVL~~SLr~~ns~~dLvVLvtd~i 337 (592)
.-.++|..++++++.++++.+...
T Consensus 5 ~~~i~s~~~~nP~~~~~~~~d~~~ 28 (103)
T PF04488_consen 5 QCSIESWARHNPDYEYILWTDESD 28 (103)
T ss_pred HHHHHHHHHHCCCCEEEEEECCCc
Confidence 346788899999999888876644
No 44
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=46.31 E-value=50 Score=32.25 Aligned_cols=21 Identities=14% Similarity=0.278 Sum_probs=16.9
Q ss_pred ccccCcceEEEEecCeeeccC
Q 007705 379 WQLTDYDKIIFIDADIIVLRN 399 (592)
Q Consensus 379 w~LtdYDRVLYLDaD~LVl~n 399 (592)
.+..++|-|+++|+|+++-.+
T Consensus 83 ~~~a~~~~i~~~DaD~~~~~~ 103 (232)
T cd06437 83 MKVAKGEYVAIFDADFVPPPD 103 (232)
T ss_pred HHhCCCCEEEEEcCCCCCChH
Confidence 344579999999999998654
No 45
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=45.12 E-value=43 Score=30.93 Aligned_cols=85 Identities=14% Similarity=0.018 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHhC-CCCcEEEEECCCCCHHHHHHHHHcCCEEEEEeeccCcccccccCCccceeeeecccccCcceEEE
Q 007705 311 CGAITLAQSLRKTG-TKRDLVLLIDNSISIPKREALTAAGWKIRIIKRIRNPRAEKKTYNEYNYSKFRLWQLTDYDKIIF 389 (592)
Q Consensus 311 ~gAlVL~~SLr~~n-s~~dLvVLvtd~ise~~r~~L~~~g~~Ii~V~~i~~p~~~~~~~~~~tytKL~iw~LtdYDRVLY 389 (592)
..+..++.||.... +... +++++++-++...+.+++....++.+....+ .. ....+-.+.+....|-|++
T Consensus 11 ~~l~~~l~sl~~q~~~~~e-vivvDd~s~d~~~~~~~~~~~~~~~~~~~~~--~g------~~~a~n~~~~~a~~~~v~~ 81 (202)
T cd06433 11 ETLEETIDSVLSQTYPNIE-YIVIDGGSTDGTVDIIKKYEDKITYWISEPD--KG------IYDAMNKGIALATGDIIGF 81 (202)
T ss_pred HHHHHHHHHHHhCCCCCce-EEEEeCCCCccHHHHHHHhHhhcEEEEecCC--cC------HHHHHHHHHHHcCCCEEEE
Confidence 34455677776543 3333 3455665556666667665443222221111 10 0111112334456789999
Q ss_pred EecCeeeccC-chhhh
Q 007705 390 IDADIIVLRN-LDLLF 404 (592)
Q Consensus 390 LDaD~LVl~n-IDeLF 404 (592)
||+|..+..+ +..+.
T Consensus 82 ld~D~~~~~~~~~~~~ 97 (202)
T cd06433 82 LNSDDTLLPGALLAVV 97 (202)
T ss_pred eCCCcccCchHHHHHH
Confidence 9999998776 44443
No 46
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=44.73 E-value=12 Score=40.50 Aligned_cols=37 Identities=30% Similarity=0.558 Sum_probs=34.2
Q ss_pred ceeeeecccccCcceEEEEecCeeeccCchhhhCCCC
Q 007705 372 NYSKFRLWQLTDYDKIIFIDADIIVLRNLDLLFHFPQ 408 (592)
Q Consensus 372 tytKL~iw~LtdYDRVLYLDaD~LVl~nIDeLFdlp~ 408 (592)
.+.++.+|++.++.+.+|+|.|+-+..+++++|+.+.
T Consensus 113 ~~~~~~~~~~~~~~a~i~~~~~i~~~~~~~~~~~v~~ 149 (369)
T KOG1950|consen 113 RDDKIKIWRLIEDGAAIYLVDDIQRFRNDDANFDVPN 149 (369)
T ss_pred cccceeecceeccCceEEEecchhhccCccccccccc
Confidence 4778999999999999999999999999999999874
No 47
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=44.00 E-value=35 Score=32.52 Aligned_cols=19 Identities=37% Similarity=0.351 Sum_probs=15.7
Q ss_pred ccCcceEEEEecCeeeccC
Q 007705 381 LTDYDKIIFIDADIIVLRN 399 (592)
Q Consensus 381 LtdYDRVLYLDaD~LVl~n 399 (592)
...+|-|+++|+|.++..+
T Consensus 80 ~~~~d~i~~~D~D~~~~~~ 98 (229)
T cd04192 80 AAKGDWIVTTDADCVVPSN 98 (229)
T ss_pred HhcCCEEEEECCCcccCHH
Confidence 3568999999999988654
No 48
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=43.33 E-value=54 Score=32.41 Aligned_cols=78 Identities=15% Similarity=0.079 Sum_probs=40.4
Q ss_pred HHHHHHHHHHhCCC---CcEEEEECCCCCHHHHHHHHHcCC----EEEEEeeccCcccccccCCccceeeeecccccCcc
Q 007705 313 AITLAQSLRKTGTK---RDLVLLIDNSISIPKREALTAAGW----KIRIIKRIRNPRAEKKTYNEYNYSKFRLWQLTDYD 385 (592)
Q Consensus 313 AlVL~~SLr~~ns~---~dLvVLvtd~ise~~r~~L~~~g~----~Ii~V~~i~~p~~~~~~~~~~tytKL~iw~LtdYD 385 (592)
..-++.||....-. .+++| ++++-++.+.+.+++... +++.+..-. ... + ....=...+...+|
T Consensus 16 l~~~l~sl~~~~y~~~~~eiiv-Vdd~s~d~t~~i~~~~~~~~~~~i~~~~~~~-~~G-~------~~a~n~g~~~a~gd 86 (241)
T cd06427 16 LPQLIASLSALDYPRSKLDVKL-LLEEDDEETIAAARALRLPSIFRVVVVPPSQ-PRT-K------PKACNYALAFARGE 86 (241)
T ss_pred HHHHHHHHHhCcCCcccEEEEE-EECCCCchHHHHHHHhccCCCeeEEEecCCC-CCc-h------HHHHHHHHHhcCCC
Confidence 44566777653211 23333 445556677777777542 232221100 000 0 00111233345689
Q ss_pred eEEEEecCeeeccC
Q 007705 386 KIIFIDADIIVLRN 399 (592)
Q Consensus 386 RVLYLDaD~LVl~n 399 (592)
-|+++|+|+++-.+
T Consensus 87 ~i~~~DaD~~~~~~ 100 (241)
T cd06427 87 YVVIYDAEDAPDPD 100 (241)
T ss_pred EEEEEcCCCCCChH
Confidence 99999999998765
No 49
>PRK10063 putative glycosyl transferase; Provisional
Probab=43.26 E-value=69 Score=32.57 Aligned_cols=94 Identities=14% Similarity=0.113 Sum_probs=46.4
Q ss_pred EEEEEEeecChhhHHHHHHHHHHHHHh--CCCCcE-EEEECCCCCHHHHHHHHHcCCEEEEEeeccCcccccccCCccce
Q 007705 297 EAYATVLHSSEAYVCGAITLAQSLRKT--GTKRDL-VLLIDNSISIPKREALTAAGWKIRIIKRIRNPRAEKKTYNEYNY 373 (592)
Q Consensus 297 ~AYVTlLtsdd~Yl~gAlVL~~SLr~~--ns~~dL-vVLvtd~ise~~r~~L~~~g~~Ii~V~~i~~p~~~~~~~~~~ty 373 (592)
...|+.......++.. ++.||... .+..++ +|+++++-++.+.+.+++..... .+..+..+.. +.. -
T Consensus 3 vSVIi~~yN~~~~l~~---~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~i~~~~~~~~-~i~~i~~~~~--G~~----~ 72 (248)
T PRK10063 3 LSVITVAFRNLEGIVK---THASLRHLAQDPGISFEWIVVDGGSNDGTREFLENLNGIF-NLRFVSEPDN--GIY----D 72 (248)
T ss_pred EEEEEEeCCCHHHHHH---HHHHHHHHHhCCCCCEEEEEEECcCcccHHHHHHHhcccC-CEEEEECCCC--CHH----H
Confidence 3445544444555544 44555431 122234 44566666777777777754211 1111221211 100 0
Q ss_pred eeeecccccCcceEEEEecCeeeccCc
Q 007705 374 SKFRLWQLTDYDKIIFIDADIIVLRNL 400 (592)
Q Consensus 374 tKL~iw~LtdYDRVLYLDaD~LVl~nI 400 (592)
.+=...+....|-|++||+|-+...+.
T Consensus 73 A~N~Gi~~a~g~~v~~ld~DD~~~~~~ 99 (248)
T PRK10063 73 AMNKGIAMAQGRFALFLNSGDIFHQDA 99 (248)
T ss_pred HHHHHHHHcCCCEEEEEeCCcccCcCH
Confidence 011122234579999999998887764
No 50
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=41.86 E-value=1.1e+02 Score=29.24 Aligned_cols=80 Identities=13% Similarity=0.066 Sum_probs=41.7
Q ss_pred HHHHHHHHHhC-CC--CcEEEEECCCCCHHHHHHHHHcCCEEEEEeeccCcccccccCCccceeeeecccccCcceEEEE
Q 007705 314 ITLAQSLRKTG-TK--RDLVLLIDNSISIPKREALTAAGWKIRIIKRIRNPRAEKKTYNEYNYSKFRLWQLTDYDKIIFI 390 (592)
Q Consensus 314 lVL~~SLr~~n-s~--~dLvVLvtd~ise~~r~~L~~~g~~Ii~V~~i~~p~~~~~~~~~~tytKL~iw~LtdYDRVLYL 390 (592)
..++.||.... +. +. +++++++-++.+.+.+++.+.+. .+..+..+... + .. ....-.+.+...+|-|+++
T Consensus 18 ~~~l~sl~~q~~~~~~~e-iivvdd~s~d~t~~~~~~~~~~~-~~~~~~~~~~~-~-~~--~~~~n~~~~~a~~d~i~~l 91 (234)
T cd06421 18 RKTLRAALAIDYPHDKLR-VYVLDDGRRPELRALAAELGVEY-GYRYLTRPDNR-H-AK--AGNLNNALAHTTGDFVAIL 91 (234)
T ss_pred HHHHHHHHhcCCCcccEE-EEEEcCCCchhHHHHHHHhhccc-CceEEEeCCCC-C-Cc--HHHHHHHHHhCCCCEEEEE
Confidence 45677777533 22 23 44567776777777777765421 11111111100 0 00 0001123334579999999
Q ss_pred ecCeeeccC
Q 007705 391 DADIIVLRN 399 (592)
Q Consensus 391 DaD~LVl~n 399 (592)
|+|.++-.+
T Consensus 92 D~D~~~~~~ 100 (234)
T cd06421 92 DADHVPTPD 100 (234)
T ss_pred ccccCcCcc
Confidence 999998654
No 51
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=41.68 E-value=60 Score=35.12 Aligned_cols=16 Identities=31% Similarity=0.362 Sum_probs=13.9
Q ss_pred cceEEEEecCeeeccC
Q 007705 384 YDKIIFIDADIIVLRN 399 (592)
Q Consensus 384 YDRVLYLDaD~LVl~n 399 (592)
+|-++++|+|+.+-.+
T Consensus 134 gd~llflDaD~~~~p~ 149 (384)
T TIGR03469 134 ADYLLLTDADIAHGPD 149 (384)
T ss_pred CCEEEEECCCCCCChh
Confidence 8999999999998554
No 52
>PRK11204 N-glycosyltransferase; Provisional
Probab=41.59 E-value=40 Score=36.50 Aligned_cols=94 Identities=13% Similarity=0.069 Sum_probs=46.4
Q ss_pred CCCEEEEEEeecChhhHHHHHHHHHHHHHh-CCCCcEEEEECCCCCHHHHHHHHH---cCCEEEEEeeccCcccccccCC
Q 007705 294 AKREAYATVLHSSEAYVCGAITLAQSLRKT-GTKRDLVLLIDNSISIPKREALTA---AGWKIRIIKRIRNPRAEKKTYN 369 (592)
Q Consensus 294 ~~r~AYVTlLtsdd~Yl~gAlVL~~SLr~~-ns~~dLvVLvtd~ise~~r~~L~~---~g~~Ii~V~~i~~p~~~~~~~~ 369 (592)
..+.+.+...+..+.. ..-++.|+.+. .++++++| ++|+-++++.+.+++ .+.++..+..-.+. .+....+
T Consensus 53 ~p~vsViIp~yne~~~---i~~~l~sl~~q~yp~~eiiV-vdD~s~d~t~~~l~~~~~~~~~v~~i~~~~n~-Gka~aln 127 (420)
T PRK11204 53 YPGVSILVPCYNEGEN---VEETISHLLALRYPNYEVIA-INDGSSDNTGEILDRLAAQIPRLRVIHLAENQ-GKANALN 127 (420)
T ss_pred CCCEEEEEecCCCHHH---HHHHHHHHHhCCCCCeEEEE-EECCCCccHHHHHHHHHHhCCcEEEEEcCCCC-CHHHHHH
Confidence 3456666554433333 34556676653 34445544 455444545544443 33333333211111 1100010
Q ss_pred ccceeeeecccccCcceEEEEecCeeeccC
Q 007705 370 EYNYSKFRLWQLTDYDKIIFIDADIIVLRN 399 (592)
Q Consensus 370 ~~tytKL~iw~LtdYDRVLYLDaD~LVl~n 399 (592)
...+..++|-++++|+|.++-.+
T Consensus 128 -------~g~~~a~~d~i~~lDaD~~~~~d 150 (420)
T PRK11204 128 -------TGAAAARSEYLVCIDGDALLDPD 150 (420)
T ss_pred -------HHHHHcCCCEEEEECCCCCCChh
Confidence 12223578999999999998765
No 53
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=40.69 E-value=97 Score=37.80 Aligned_cols=75 Identities=12% Similarity=0.149 Sum_probs=43.3
Q ss_pred EEEECCCCCHHHHHHHHHcCCEEEEEeeccCcccccccCCccceeeeecccccCcceEEEEecCeeeccCc-h----hhh
Q 007705 330 VLLIDNSISIPKREALTAAGWKIRIIKRIRNPRAEKKTYNEYNYSKFRLWQLTDYDKIIFIDADIIVLRNL-D----LLF 404 (592)
Q Consensus 330 vVLvtd~ise~~r~~L~~~g~~Ii~V~~i~~p~~~~~~~~~~tytKL~iw~LtdYDRVLYLDaD~LVl~nI-D----eLF 404 (592)
+++++|+-+++..+..++.+++.+... .+...+.+..+ ...+..++|-|+++|||.++..|. . .++
T Consensus 295 ViVVDDgS~D~t~~la~~~~v~yI~R~--~n~~gKAGnLN-------~aL~~a~GEyIavlDAD~ip~pdfL~~~V~~f~ 365 (852)
T PRK11498 295 IWILDDGGREEFRQFAQEVGVKYIARP--THEHAKAGNIN-------NALKYAKGEFVAIFDCDHVPTRSFLQMTMGWFL 365 (852)
T ss_pred EEEEeCCCChHHHHHHHHCCcEEEEeC--CCCcchHHHHH-------HHHHhCCCCEEEEECCCCCCChHHHHHHHHHHH
Confidence 345577777778888888876664321 11111111111 122235789999999999987764 2 223
Q ss_pred CCCCceeec
Q 007705 405 HFPQMSATG 413 (592)
Q Consensus 405 dlp~iaAvp 413 (592)
+-|.++.+.
T Consensus 366 ~dP~VglVQ 374 (852)
T PRK11498 366 KDKKLAMMQ 374 (852)
T ss_pred hCCCeEEEE
Confidence 445666653
No 54
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=40.24 E-value=68 Score=30.17 Aligned_cols=80 Identities=16% Similarity=0.172 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHhC-CCCcEEEEECCCCCHHHHHHHHHcC--CEEEEEeeccCcccccccCCccceeeeecccccCcceEE
Q 007705 312 GAITLAQSLRKTG-TKRDLVLLIDNSISIPKREALTAAG--WKIRIIKRIRNPRAEKKTYNEYNYSKFRLWQLTDYDKII 388 (592)
Q Consensus 312 gAlVL~~SLr~~n-s~~dLvVLvtd~ise~~r~~L~~~g--~~Ii~V~~i~~p~~~~~~~~~~tytKL~iw~LtdYDRVL 388 (592)
.+.-++.||.... ....++|+.++.-++.+.+.+++.. ..+..+ ..+.. .+ ....+-......+.|-|+
T Consensus 14 ~l~~~l~Sl~~q~~~~~eiiivdd~ss~d~t~~~~~~~~~~~~i~~i---~~~~n-~G----~~~a~N~g~~~a~gd~i~ 85 (201)
T cd04195 14 FLREALESILKQTLPPDEVVLVKDGPVTQSLNEVLEEFKRKLPLKVV---PLEKN-RG----LGKALNEGLKHCTYDWVA 85 (201)
T ss_pred HHHHHHHHHHhcCCCCcEEEEEECCCCchhHHHHHHHHHhcCCeEEE---EcCcc-cc----HHHHHHHHHHhcCCCEEE
Confidence 3446677776543 3344444444444665655555431 112212 11111 00 011222334455788999
Q ss_pred EEecCeeeccC
Q 007705 389 FIDADIIVLRN 399 (592)
Q Consensus 389 YLDaD~LVl~n 399 (592)
+||+|.++..+
T Consensus 86 ~lD~Dd~~~~~ 96 (201)
T cd04195 86 RMDTDDISLPD 96 (201)
T ss_pred EeCCccccCcH
Confidence 99999987654
No 55
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=38.19 E-value=23 Score=33.84 Aligned_cols=21 Identities=29% Similarity=0.539 Sum_probs=16.2
Q ss_pred ccccCcceEEEEecCeeeccC
Q 007705 379 WQLTDYDKIIFIDADIIVLRN 399 (592)
Q Consensus 379 w~LtdYDRVLYLDaD~LVl~n 399 (592)
.+...+|=++++|+|+++-.+
T Consensus 82 ~~~a~~d~i~~~D~D~~~~~~ 102 (196)
T cd02520 82 YEEARYDILVISDSDISVPPD 102 (196)
T ss_pred HHhCCCCEEEEECCCceEChh
Confidence 334578999999999987543
No 56
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=37.96 E-value=52 Score=30.33 Aligned_cols=79 Identities=14% Similarity=0.120 Sum_probs=39.8
Q ss_pred HHHHHHHHHHhC-CCCcEEEEECCCCCHHHHHHHHHcC----CEEEEEeeccCcccccccCCccceeeeecccccCcceE
Q 007705 313 AITLAQSLRKTG-TKRDLVLLIDNSISIPKREALTAAG----WKIRIIKRIRNPRAEKKTYNEYNYSKFRLWQLTDYDKI 387 (592)
Q Consensus 313 AlVL~~SLr~~n-s~~dLvVLvtd~ise~~r~~L~~~g----~~Ii~V~~i~~p~~~~~~~~~~tytKL~iw~LtdYDRV 387 (592)
..-++.||.... ....++ +++++-++.+.+.+++.. ..++.+..-..... ....+-...+....|-|
T Consensus 12 l~~~l~sl~~q~~~~~eii-vvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~n~g~~~a~g~~i 83 (182)
T cd06420 12 LELVLKSVLNQSILPFEVI-IADDGSTEETKELIEEFKSQFPIPIKHVWQEDEGFR-------KAKIRNKAIAAAKGDYL 83 (182)
T ss_pred HHHHHHHHHhccCCCCEEE-EEeCCCchhHHHHHHHHHhhcCCceEEEEcCCcchh-------HHHHHHHHHHHhcCCEE
Confidence 345567776543 344444 445555555555555432 23332211111000 00111123445678999
Q ss_pred EEEecCeeeccC
Q 007705 388 IFIDADIIVLRN 399 (592)
Q Consensus 388 LYLDaD~LVl~n 399 (592)
++||+|.++..+
T Consensus 84 ~~lD~D~~~~~~ 95 (182)
T cd06420 84 IFIDGDCIPHPD 95 (182)
T ss_pred EEEcCCcccCHH
Confidence 999999988655
No 57
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=36.87 E-value=84 Score=30.98 Aligned_cols=73 Identities=15% Similarity=0.105 Sum_probs=42.8
Q ss_pred HHHHHHHHHHhCCCCcEEEEECCCCCHHHHHHHHHcCCEEEEEeeccCcccccccCCccceeeeecccccCcceEEEEec
Q 007705 313 AITLAQSLRKTGTKRDLVLLIDNSISIPKREALTAAGWKIRIIKRIRNPRAEKKTYNEYNYSKFRLWQLTDYDKIIFIDA 392 (592)
Q Consensus 313 AlVL~~SLr~~ns~~dLvVLvtd~ise~~r~~L~~~g~~Ii~V~~i~~p~~~~~~~~~~tytKL~iw~LtdYDRVLYLDa 392 (592)
..-++.||... .+=+|+++++-++.+.+.+++.+.+++.. .. .. ....+-++......|-|++||+
T Consensus 15 l~~~l~sl~~~---~~eiivvD~gStD~t~~i~~~~~~~v~~~---~~--~g------~~~~~n~~~~~a~~d~vl~lDa 80 (229)
T cd02511 15 IERCLESVKWA---VDEIIVVDSGSTDRTVEIAKEYGAKVYQR---WW--DG------FGAQRNFALELATNDWVLSLDA 80 (229)
T ss_pred HHHHHHHHhcc---cCEEEEEeCCCCccHHHHHHHcCCEEEEC---CC--CC------hHHHHHHHHHhCCCCEEEEEeC
Confidence 34455666533 12355666666677778888888877643 11 00 0111112333456789999999
Q ss_pred CeeeccC
Q 007705 393 DIIVLRN 399 (592)
Q Consensus 393 D~LVl~n 399 (592)
|.++..+
T Consensus 81 D~~~~~~ 87 (229)
T cd02511 81 DERLTPE 87 (229)
T ss_pred CcCcCHH
Confidence 9988665
No 58
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=36.49 E-value=29 Score=26.89 Aligned_cols=31 Identities=35% Similarity=0.433 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHhhcccCcchhhcccccc
Q 007705 24 NLVFLAFFFIIYVGLFLQPSSSIYFENAASL 54 (592)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 54 (592)
=++++.++|+.+..+.++|+..-.+|++|.+
T Consensus 14 ~~v~~~~~F~gi~~w~~~~~~k~~~e~aa~l 44 (49)
T PF05545_consen 14 GTVLFFVFFIGIVIWAYRPRNKKRFEEAANL 44 (49)
T ss_pred HHHHHHHHHHHHHHHHHcccchhhHHHHHcc
Confidence 3456666677777888899988899988754
No 59
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=35.83 E-value=87 Score=29.40 Aligned_cols=78 Identities=19% Similarity=0.166 Sum_probs=40.9
Q ss_pred HHHHHHHHHHhCC---CCcEEEEECCCCCHHHHHHHHHcCCEEEEEeeccCcccccccCCccceeeeeccc-----ccCc
Q 007705 313 AITLAQSLRKTGT---KRDLVLLIDNSISIPKREALTAAGWKIRIIKRIRNPRAEKKTYNEYNYSKFRLWQ-----LTDY 384 (592)
Q Consensus 313 AlVL~~SLr~~ns---~~dLvVLvtd~ise~~r~~L~~~g~~Ii~V~~i~~p~~~~~~~~~~tytKL~iw~-----LtdY 384 (592)
+..++.||..... .+.++| ++++-++.+.+.+++.+..++.... .....+. +..-...+ -..+
T Consensus 12 i~~~l~sl~~~~~p~~~~eiiv-vdd~s~D~t~~~~~~~~~~~~~~~~--~~~~gk~------~aln~g~~~a~~~~~~~ 82 (183)
T cd06438 12 IGNTVRSLKAQDYPRELYRIFV-VADNCTDDTAQVARAAGATVLERHD--PERRGKG------YALDFGFRHLLNLADDP 82 (183)
T ss_pred HHHHHHHHHhcCCCCcccEEEE-EeCCCCchHHHHHHHcCCeEEEeCC--CCCCCHH------HHHHHHHHHHHhcCCCC
Confidence 3455667765432 233444 4555566777778877766443211 1111110 10001111 1358
Q ss_pred ceEEEEecCeeeccC
Q 007705 385 DKIIFIDADIIVLRN 399 (592)
Q Consensus 385 DRVLYLDaD~LVl~n 399 (592)
|-|+++|+|+++-.+
T Consensus 83 d~v~~~DaD~~~~p~ 97 (183)
T cd06438 83 DAVVVFDADNLVDPN 97 (183)
T ss_pred CEEEEEcCCCCCChh
Confidence 999999999999644
No 60
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=35.76 E-value=99 Score=29.85 Aligned_cols=83 Identities=14% Similarity=0.127 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEECCCCCHHHHHHHHHc--CCEEEEEeeccCcccccccCCccceeeeecccccCcceEE
Q 007705 311 CGAITLAQSLRKTGTKRDLVLLIDNSISIPKREALTAA--GWKIRIIKRIRNPRAEKKTYNEYNYSKFRLWQLTDYDKII 388 (592)
Q Consensus 311 ~gAlVL~~SLr~~ns~~dLvVLvtd~ise~~r~~L~~~--g~~Ii~V~~i~~p~~~~~~~~~~tytKL~iw~LtdYDRVL 388 (592)
....-++.|+.... ...++|+ +++-+++..+.|... ...++.+. .+...+ ....-...+...+|-|+
T Consensus 14 ~~l~~~l~sl~~q~-~~eiivv-dd~s~d~~~~~l~~~~~~~~~~v~~---~~~~g~------~~a~n~g~~~a~~d~v~ 82 (235)
T cd06434 14 DVFRECLRSILRQK-PLEIIVV-TDGDDEPYLSILSQTVKYGGIFVIT---VPHPGK------RRALAEGIRHVTTDIVV 82 (235)
T ss_pred HHHHHHHHHHHhCC-CCEEEEE-eCCCChHHHHHHHhhccCCcEEEEe---cCCCCh------HHHHHHHHHHhCCCEEE
Confidence 33445567777654 5565554 455555566655332 22222111 111110 01111223345799999
Q ss_pred EEecCeeeccC-chhhh
Q 007705 389 FIDADIIVLRN-LDLLF 404 (592)
Q Consensus 389 YLDaD~LVl~n-IDeLF 404 (592)
+||+|+.+..+ +..+.
T Consensus 83 ~lD~D~~~~~~~l~~l~ 99 (235)
T cd06434 83 LLDSDTVWPPNALPEML 99 (235)
T ss_pred EECCCceeChhHHHHHH
Confidence 99999999887 44444
No 61
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=35.42 E-value=35 Score=32.33 Aligned_cols=83 Identities=22% Similarity=0.170 Sum_probs=41.0
Q ss_pred HHHHHHHHHHh-CCCCcEEEEECCCCCHHHHHHHHHcCCEEEEEeeccCcccccccCCccceeeeecccccCcceEEEEe
Q 007705 313 AITLAQSLRKT-GTKRDLVLLIDNSISIPKREALTAAGWKIRIIKRIRNPRAEKKTYNEYNYSKFRLWQLTDYDKIIFID 391 (592)
Q Consensus 313 AlVL~~SLr~~-ns~~dLvVLvtd~ise~~r~~L~~~g~~Ii~V~~i~~p~~~~~~~~~~tytKL~iw~LtdYDRVLYLD 391 (592)
..-++.||... .+... +++++++-++.+.+.+++.+.... +..+..+... +.....+...-.+- ..++|-++++|
T Consensus 12 l~~~l~sl~~q~~~~~e-iiivD~~s~d~t~~~~~~~~~~~~-i~~~~~~~n~-g~~~~~n~~~~~a~-~~~~d~v~~ld 87 (202)
T cd04185 12 LKECLDALLAQTRPPDH-IIVIDNASTDGTAEWLTSLGDLDN-IVYLRLPENL-GGAGGFYEGVRRAY-ELGYDWIWLMD 87 (202)
T ss_pred HHHHHHHHHhccCCCce-EEEEECCCCcchHHHHHHhcCCCc-eEEEECcccc-chhhHHHHHHHHHh-ccCCCEEEEeC
Confidence 34556677653 23334 455566666667777777654321 2222222110 10000000000011 24689999999
Q ss_pred cCeeeccC
Q 007705 392 ADIIVLRN 399 (592)
Q Consensus 392 aD~LVl~n 399 (592)
+|.++..+
T Consensus 88 ~D~~~~~~ 95 (202)
T cd04185 88 DDAIPDPD 95 (202)
T ss_pred CCCCcChH
Confidence 99999765
No 62
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=34.84 E-value=68 Score=27.98 Aligned_cols=83 Identities=19% Similarity=0.109 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHhCCC-CcEEEEECCCCCHHHHHHHHHcCCEEEEEeeccCcccccccCCccceeeeecccccCcceEE
Q 007705 310 VCGAITLAQSLRKTGTK-RDLVLLIDNSISIPKREALTAAGWKIRIIKRIRNPRAEKKTYNEYNYSKFRLWQLTDYDKII 388 (592)
Q Consensus 310 l~gAlVL~~SLr~~ns~-~dLvVLvtd~ise~~r~~L~~~g~~Ii~V~~i~~p~~~~~~~~~~tytKL~iw~LtdYDRVL 388 (592)
-.....++.|+...... .. +|+++++-++.+.+.+++.......+.....+.. ....+.+-........+-|+
T Consensus 15 ~~~l~~~l~s~~~q~~~~~e-iivvddgs~d~t~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~ 88 (291)
T COG0463 15 EEYLPEALESLLNQTYKDFE-IIVVDDGSTDGTTEIAIEYGAKDVRVIRLINERN-----GGLGAARNAGLEYARGDYIV 88 (291)
T ss_pred hhhHHHHHHHHHhhhhcceE-EEEEeCCCCCChHHHHHHHhhhcceEEEeecccC-----CChHHHHHhhHHhccCCEEE
Confidence 35556677777765433 35 6677777776666666665443211111000000 01122222333333349999
Q ss_pred EEecCeeeccC
Q 007705 389 FIDADIIVLRN 399 (592)
Q Consensus 389 YLDaD~LVl~n 399 (592)
++|+|.+ ..+
T Consensus 89 ~~d~d~~-~~~ 98 (291)
T COG0463 89 FLDADDQ-HPP 98 (291)
T ss_pred EEccCCC-CCH
Confidence 9999999 665
No 63
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=33.40 E-value=66 Score=30.68 Aligned_cols=75 Identities=16% Similarity=0.158 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHhC-CCCcEEEEECCCCCHHHHHHHHHcCCEEEEEeeccCcccccccCCccceeeeecccccCcceEEEE
Q 007705 312 GAITLAQSLRKTG-TKRDLVLLIDNSISIPKREALTAAGWKIRIIKRIRNPRAEKKTYNEYNYSKFRLWQLTDYDKIIFI 390 (592)
Q Consensus 312 gAlVL~~SLr~~n-s~~dLvVLvtd~ise~~r~~L~~~g~~Ii~V~~i~~p~~~~~~~~~~tytKL~iw~LtdYDRVLYL 390 (592)
...-++.||.... ....+ ++++++-++++.+.+++.+..++. .+... . ..+-........+-|+++
T Consensus 13 ~l~~~l~sl~~q~~~~~ev-ivvdd~s~d~~~~~~~~~~~~~~~-----~~~g~-~------~a~n~g~~~a~~~~i~~~ 79 (221)
T cd02522 13 NLPRLLASLRRLNPLPLEI-IVVDGGSTDGTVAIARSAGVVVIS-----SPKGR-A------RQMNAGAAAARGDWLLFL 79 (221)
T ss_pred HHHHHHHHHHhccCCCcEE-EEEeCCCCccHHHHHhcCCeEEEe-----CCcCH-H------HHHHHHHHhccCCEEEEE
Confidence 3456677776543 33444 445666566666666663333221 11110 0 111123333457899999
Q ss_pred ecCeeeccC
Q 007705 391 DADIIVLRN 399 (592)
Q Consensus 391 DaD~LVl~n 399 (592)
|+|..+..+
T Consensus 80 D~D~~~~~~ 88 (221)
T cd02522 80 HADTRLPPD 88 (221)
T ss_pred cCCCCCChh
Confidence 999988654
No 64
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=30.73 E-value=1.2e+02 Score=28.55 Aligned_cols=27 Identities=37% Similarity=0.449 Sum_probs=20.3
Q ss_pred cccCcceEEEEecCeeeccC-chhhhCC
Q 007705 380 QLTDYDKIIFIDADIIVLRN-LDLLFHF 406 (592)
Q Consensus 380 ~LtdYDRVLYLDaD~LVl~n-IDeLFdl 406 (592)
....+|-|++||+|.++..+ +..+.+.
T Consensus 76 ~~~~g~~v~~ld~Dd~~~~~~l~~~~~~ 103 (214)
T cd04196 76 QAADGDYVFFCDQDDIWLPDKLERLLKA 103 (214)
T ss_pred HhCCCCEEEEECCCcccChhHHHHHHHH
Confidence 34578999999999888766 5555553
No 65
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=29.48 E-value=1.1e+02 Score=31.51 Aligned_cols=88 Identities=19% Similarity=0.186 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHhCCCCcEEE-EECCCCCHHHHHHHHH----cCCE-EEEEeeccCcccccccCCccceeeeecccccCc
Q 007705 311 CGAITLAQSLRKTGTKRDLVL-LIDNSISIPKREALTA----AGWK-IRIIKRIRNPRAEKKTYNEYNYSKFRLWQLTDY 384 (592)
Q Consensus 311 ~gAlVL~~SLr~~ns~~dLvV-Lvtd~ise~~r~~L~~----~g~~-Ii~V~~i~~p~~~~~~~~~~tytKL~iw~LtdY 384 (592)
.-...++.|+.+..+..++.| +++++-+.+..+.|++ .+.. .+....-..++.. +-.|=...+....
T Consensus 17 ~~l~~~l~~l~~~~~~~~~eiIvvd~~s~~~~~~~l~~~~~~~~~~~~i~~~~~~~~f~~-------a~arN~g~~~A~~ 89 (281)
T PF10111_consen 17 ERLRNCLESLSQFQSDPDFEIIVVDDGSSDEFDEELKKLCEKNGFIRYIRHEDNGEPFSR-------AKARNIGAKYARG 89 (281)
T ss_pred HHHHHHHHHHHhcCCCCCEEEEEEECCCchhHHHHHHHHHhccCceEEEEcCCCCCCcCH-------HHHHHHHHHHcCC
Confidence 344566788887655566544 4455554443333333 3433 2221111111110 1111123334578
Q ss_pred ceEEEEecCeeeccC-chhhhC
Q 007705 385 DKIIFIDADIIVLRN-LDLLFH 405 (592)
Q Consensus 385 DRVLYLDaD~LVl~n-IDeLFd 405 (592)
|-|+++|+|+++-.+ +..+..
T Consensus 90 d~l~flD~D~i~~~~~i~~~~~ 111 (281)
T PF10111_consen 90 DYLIFLDADCIPSPDFIEKLLN 111 (281)
T ss_pred CEEEEEcCCeeeCHHHHHHHHH
Confidence 999999999999765 344444
No 66
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=26.58 E-value=1.3e+02 Score=28.89 Aligned_cols=26 Identities=15% Similarity=0.245 Sum_probs=19.4
Q ss_pred eeeecccccCcceEEEEecCeeeccC
Q 007705 374 SKFRLWQLTDYDKIIFIDADIIVLRN 399 (592)
Q Consensus 374 tKL~iw~LtdYDRVLYLDaD~LVl~n 399 (592)
.+-...+....|-+++||+|.++..+
T Consensus 75 a~N~g~~~a~gd~i~~lD~D~~~~~~ 100 (219)
T cd06913 75 AKNQAIAQSSGRYLCFLDSDDVMMPQ 100 (219)
T ss_pred HHHHHHHhcCCCEEEEECCCccCChh
Confidence 33345556778999999999987654
No 67
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=26.44 E-value=1.6e+02 Score=32.05 Aligned_cols=93 Identities=12% Similarity=0.089 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHhC---CCCcEEEEECCCCCHHHHHHHHHcCCEEEEEeeccCcccccccC-Cccceeee---------e
Q 007705 311 CGAITLAQSLRKTG---TKRDLVLLIDNSISIPKREALTAAGWKIRIIKRIRNPRAEKKTY-NEYNYSKF---------R 377 (592)
Q Consensus 311 ~gAlVL~~SLr~~n---s~~dLvVLvtd~ise~~r~~L~~~g~~Ii~V~~i~~p~~~~~~~-~~~tytKL---------~ 377 (592)
..+.-++.||++.. ...+++|. .|+-.++..+..+..+..+..+..........+.. ....|.++ .
T Consensus 13 ~~l~r~LesLl~~~p~~~~~~liIs-~DG~~~~~~~~v~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~ia~hyk~aln~ 91 (334)
T cd02514 13 DYLRRMLDSLLSYRPSAEKFPIIVS-QDGGYEEVADVAKSFGDGVTHIQHPPISIKNVNPPHKFQGYYRIARHYKWALTQ 91 (334)
T ss_pred HHHHHHHHHHHhccccCCCceEEEE-eCCCchHHHHHHHhhccccEEEEcccccccccCcccccchhhHHHHHHHHHHHH
Confidence 33445667777653 23455555 45555556666666643333232211100000000 00011111 2
Q ss_pred cccccCcceEEEEecCeeeccCchhhh
Q 007705 378 LWQLTDYDKIIFIDADIIVLRNLDLLF 404 (592)
Q Consensus 378 iw~LtdYDRVLYLDaD~LVl~nIDeLF 404 (592)
+++...|++||+||.|+++--+.=+.|
T Consensus 92 vF~~~~~~~vIILEDDl~~sPdFf~yf 118 (334)
T cd02514 92 TFNLFGYSFVIILEDDLDIAPDFFSYF 118 (334)
T ss_pred HHHhcCCCEEEEECCCCccCHhHHHHH
Confidence 333346999999999999988743333
No 68
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=25.91 E-value=1.2e+02 Score=31.16 Aligned_cols=87 Identities=16% Similarity=0.173 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHhCCCC-c-EEEEECCCCCHHHHHHHHH-----cCCEEEEEeeccCcccccccCCccceeeeecccccC
Q 007705 311 CGAITLAQSLRKTGTKR-D-LVLLIDNSISIPKREALTA-----AGWKIRIIKRIRNPRAEKKTYNEYNYSKFRLWQLTD 383 (592)
Q Consensus 311 ~gAlVL~~SLr~~ns~~-d-LvVLvtd~ise~~r~~L~~-----~g~~Ii~V~~i~~p~~~~~~~~~~tytKL~iw~Ltd 383 (592)
....-++.||....... . =+|+++++-++.+...+.+ ....++.+ ..+... + ..-.+-...+...
T Consensus 12 ~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~vi---~~~~n~-G----~~~a~N~g~~~A~ 83 (299)
T cd02510 12 STLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKVKVL---RLKKRE-G----LIRARIAGARAAT 83 (299)
T ss_pred HHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCCcEEEE---EcCCCC-C----HHHHHHHHHHHcc
Confidence 55556788888654332 1 2556666655555444422 22222222 111100 0 0001111222346
Q ss_pred cceEEEEecCeeeccC-chhhhC
Q 007705 384 YDKIIFIDADIIVLRN-LDLLFH 405 (592)
Q Consensus 384 YDRVLYLDaD~LVl~n-IDeLFd 405 (592)
.|-|++||+|+.+..+ |..|.+
T Consensus 84 gd~i~fLD~D~~~~~~wL~~ll~ 106 (299)
T cd02510 84 GDVLVFLDSHCEVNVGWLEPLLA 106 (299)
T ss_pred CCEEEEEeCCcccCccHHHHHHH
Confidence 7999999999999654 444443
No 69
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 6 GT6 from CAZY comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (2.4.1.151 from EC); alpha-1,3 N-acetylgalactosaminyltransferase (2.4.1.40 from EC); alpha-galactosyltransferase (2.4.1.37 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane; PDB: 2Y7A_B 2O1G_A 1R82_A 2RJ1_A 3IOJ_B 2RJ4_A 3I0C_A 3SX8_A 1ZJ1_A 3I0E_A ....
Probab=25.70 E-value=89 Score=34.06 Aligned_cols=168 Identities=10% Similarity=0.132 Sum_probs=76.4
Q ss_pred CCCCEEEEEEeecChhhHHHHHHHHHHHHHh---CCCCcEEEEECCC--CCHHHHHHHHH-cCCEEEEEeeccCcccccc
Q 007705 293 IAKREAYATVLHSSEAYVCGAITLAQSLRKT---GTKRDLVLLIDNS--ISIPKREALTA-AGWKIRIIKRIRNPRAEKK 366 (592)
Q Consensus 293 ~~~r~AYVTlLtsdd~Yl~gAlVL~~SLr~~---ns~~dLvVLvtd~--ise~~r~~L~~-~g~~Ii~V~~i~~p~~~~~ 366 (592)
..-+.+-+++.+ ..|+.-..-.+.|-.++ |-+..++|+.++. ++.-. |.. ...+++.|..- .
T Consensus 97 ~n~tIGL~vfA~--GkY~~fl~~Fl~SAek~Fm~g~~V~YYVFTD~p~~vP~i~---l~~~r~~~V~~v~~~-------~ 164 (337)
T PF03414_consen 97 QNITIGLTVFAT--GKYIVFLKDFLESAEKHFMVGHRVIYYVFTDQPSKVPRIE---LGPGRRLKVFEVQEE-------K 164 (337)
T ss_dssp CT-EEEEEEEE---CCHHHHHHHHHHHHHHHBSTTSEEEEEEEES-GGGS---------TTEEEEEEE-SGG-------S
T ss_pred cCceEEEEEEec--ccHHHHHHHHHHhHHHhccCCcEEEEEEEeCchhhCCccc---cCCCceeEEEEeccc-------C
Confidence 334455554433 37888888888888776 3344445555432 22211 110 11222222110 1
Q ss_pred cCCccceeeeeccc-------ccCcceEEEEecCeeeccCch-hhhCCCCcee------------------------ec-
Q 007705 367 TYNEYNYSKFRLWQ-------LTDYDKIIFIDADIIVLRNLD-LLFHFPQMSA------------------------TG- 413 (592)
Q Consensus 367 ~~~~~tytKL~iw~-------LtdYDRVLYLDaD~LVl~nID-eLFdlp~iaA------------------------vp- 413 (592)
.+...+..|+.++. +-++|-+.++|+|+++.+++. |.+. +.++. +|
T Consensus 165 ~Wqd~sm~Rm~~i~~~i~~~~~~EvDYLFc~dvd~~F~~~vGvE~Lg-~lva~LHp~~y~~~~~~FpYERrp~S~AyIp~ 243 (337)
T PF03414_consen 165 RWQDISMMRMEMISEHIEQHIQHEVDYLFCMDVDMVFQDHVGVEILG-DLVATLHPWFYFKPRESFPYERRPKSQAYIPY 243 (337)
T ss_dssp SHHHHHHHHHHHHHHHHHHCHHHH-SEEEEEESSEEE-S-B-GGG-S-SEEEEESTTTTTSTGGGS--B-STTSTTB--T
T ss_pred CCccchhHHHHHHHHHHHHHHhhcCCEEEEEecceEEecccCHHHHH-HHHHHhCHHHHCCChhhCccccCccccccccC
Confidence 11122344444333 246899999999999998875 2221 11110 11
Q ss_pred CCC-cceeceEEEEeCCHH------HHHHHHHHHHcCCCCCCCCcchHHhhcc---ceeecCCccccccc
Q 007705 414 NDI-WIFNSGIMVIEPSNC------TFRILMSKRKEIVSYNGGDQGFLNEVYV---WWHRLPRRVNFLKN 473 (592)
Q Consensus 414 D~~-~yFNSGVMVInPs~~------~fe~Lle~~~e~~sy~~~DQdiLN~vF~---~w~~LP~rYN~l~~ 473 (592)
+.| .|+-+|++-=.+..- -.+.|++-..+.-.-.+.|-.-||.+|- -.+.|++.|+.-..
T Consensus 244 ~eGDfYY~ga~fGGt~~~vl~Lt~~c~~~i~~D~~n~I~A~WhDESHLNKYfl~~KPtKvLSPEY~Wd~~ 313 (337)
T PF03414_consen 244 GEGDFYYHGAFFGGTVEEVLRLTEACHQGIMQDKANGIEALWHDESHLNKYFLYHKPTKVLSPEYCWDER 313 (337)
T ss_dssp T--S--EECCEEEECHHHHHHHHHHHHHHHHHHHHTT---TTCHHHHHHHHHHHS--SEEE-GGGSBSHH
T ss_pred CCCCeEEeceecCCcHHHHHHHHHHHHHHHHhhhhcCceEeccchhhhHHHHhhCCCceecCHHHccCcc
Confidence 122 266666655443321 1122222222222345789999999986 36789999987543
No 70
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=25.31 E-value=66 Score=30.77 Aligned_cols=18 Identities=28% Similarity=0.326 Sum_probs=13.9
Q ss_pred cCcceEEEEecCeeeccC
Q 007705 382 TDYDKIIFIDADIIVLRN 399 (592)
Q Consensus 382 tdYDRVLYLDaD~LVl~n 399 (592)
...|-|++||+|..+..+
T Consensus 77 a~gd~i~~lD~D~~~~~~ 94 (224)
T cd06442 77 ARGDVIVVMDADLSHPPE 94 (224)
T ss_pred cCCCEEEEEECCCCCCHH
Confidence 445889999999887543
No 71
>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function. The function of is unknown although a number of the members are thought to be glycosyltransferases.
Probab=25.25 E-value=1.1e+02 Score=32.82 Aligned_cols=53 Identities=25% Similarity=0.414 Sum_probs=38.0
Q ss_pred CCEEEEEeeccCcccccccCCccceeeeecccc-cCcceEEEEecCeeeccCchhhhC
Q 007705 349 GWKIRIIKRIRNPRAEKKTYNEYNYSKFRLWQL-TDYDKIIFIDADIIVLRNLDLLFH 405 (592)
Q Consensus 349 g~~Ii~V~~i~~p~~~~~~~~~~tytKL~iw~L-tdYDRVLYLDaD~LVl~nIDeLFd 405 (592)
.|+|+.|+.++ +.. ..-..-+.|+..-.+ .+|+--||+|+-+-+..|+..|++
T Consensus 121 ~WrIv~v~~lp--~~d--~rr~~r~~K~lpHrlfp~y~ySIWID~ki~L~~Dp~~lie 174 (305)
T PF04765_consen 121 IWRIVVVKNLP--YDD--PRRNGRIPKLLPHRLFPNYDYSIWIDGKIQLIVDPLLLIE 174 (305)
T ss_pred ceEEEEecCCC--Ccc--hhhcCcccceeccccCCCCceEEEEeeeEEEecCHHHHHH
Confidence 38888886552 111 111234788887776 689999999999999999887775
No 72
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=24.48 E-value=2.4e+02 Score=27.30 Aligned_cols=17 Identities=41% Similarity=0.423 Sum_probs=14.0
Q ss_pred CcceEEEEecCeeeccC
Q 007705 383 DYDKIIFIDADIIVLRN 399 (592)
Q Consensus 383 dYDRVLYLDaD~LVl~n 399 (592)
++|-|+++|+|+++-.+
T Consensus 84 ~~d~i~~lD~D~~~~~~ 100 (236)
T cd06435 84 DAEIIAVIDADYQVEPD 100 (236)
T ss_pred CCCEEEEEcCCCCcCHH
Confidence 38999999999887554
No 73
>PRK10073 putative glycosyl transferase; Provisional
Probab=24.29 E-value=1.3e+02 Score=31.98 Aligned_cols=91 Identities=13% Similarity=0.117 Sum_probs=45.7
Q ss_pred CEEEEEEeecChhhHHHHHHHHHHHHHhC-CCCcEEEEECCCCCHHHHHHHHHc---CCEEEEEeeccCcccccccCCcc
Q 007705 296 REAYATVLHSSEAYVCGAITLAQSLRKTG-TKRDLVLLIDNSISIPKREALTAA---GWKIRIIKRIRNPRAEKKTYNEY 371 (592)
Q Consensus 296 r~AYVTlLtsdd~Yl~gAlVL~~SLr~~n-s~~dLvVLvtd~ise~~r~~L~~~---g~~Ii~V~~i~~p~~~~~~~~~~ 371 (592)
....++-.+..+.|+.. ++.||.... ++..+ |+++|+-++.+.+.+++. ...+..+. .+... .
T Consensus 7 ~vSVIIP~yN~~~~L~~---~l~Sl~~Qt~~~~EI-IiVdDgStD~t~~i~~~~~~~~~~i~vi~---~~n~G------~ 73 (328)
T PRK10073 7 KLSIIIPLYNAGKDFRA---FMESLIAQTWTALEI-IIVNDGSTDNSVEIAKHYAENYPHVRLLH---QANAG------V 73 (328)
T ss_pred eEEEEEeccCCHHHHHH---HHHHHHhCCCCCeEE-EEEeCCCCccHHHHHHHHHhhCCCEEEEE---CCCCC------h
Confidence 34455544545566654 457776532 33343 445555555555555543 22333222 11111 0
Q ss_pred ceeeeecccccCcceEEEEecCeeeccC
Q 007705 372 NYSKFRLWQLTDYDKIIFIDADIIVLRN 399 (592)
Q Consensus 372 tytKL~iw~LtdYDRVLYLDaD~LVl~n 399 (592)
+.++=...+...-|-|+|+|+|-.+..+
T Consensus 74 ~~arN~gl~~a~g~yi~flD~DD~~~p~ 101 (328)
T PRK10073 74 SVARNTGLAVATGKYVAFPDADDVVYPT 101 (328)
T ss_pred HHHHHHHHHhCCCCEEEEECCCCccChh
Confidence 1111123334456889999999998765
No 74
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=24.23 E-value=1.3e+02 Score=28.09 Aligned_cols=22 Identities=14% Similarity=0.152 Sum_probs=16.6
Q ss_pred cccccCcceEEEEecCeeeccC
Q 007705 378 LWQLTDYDKIIFIDADIIVLRN 399 (592)
Q Consensus 378 iw~LtdYDRVLYLDaD~LVl~n 399 (592)
.++....|-++++|+|..+..+
T Consensus 78 g~~~a~~d~i~~ld~D~~~~~~ 99 (202)
T cd04184 78 ALELATGEFVALLDHDDELAPH 99 (202)
T ss_pred HHHhhcCCEEEEECCCCcCChH
Confidence 3334567999999999988654
No 75
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=23.89 E-value=63 Score=26.70 Aligned_cols=31 Identities=23% Similarity=0.389 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHhhcccCcchhhccccc
Q 007705 23 MNLVFLAFFFIIYVGLFLQPSSSIYFENAAS 53 (592)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 53 (592)
+=++++.+|+++|..+.++|.----+|.||-
T Consensus 13 ~~t~~~~l~fiavi~~ayr~~~K~~~d~aa~ 43 (60)
T COG4736 13 WGTIAFTLFFIAVIYFAYRPGKKGEFDEAAR 43 (60)
T ss_pred HHHHHHHHHHHHHHHHHhcccchhhHHHHhc
Confidence 3467888999999999999998888887763
No 76
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=21.80 E-value=2.5e+02 Score=28.88 Aligned_cols=40 Identities=18% Similarity=0.312 Sum_probs=27.1
Q ss_pred cCcceEEEEecCeeeccC-chhhh----CCCCceeecCCCcceec
Q 007705 382 TDYDKIIFIDADIIVLRN-LDLLF----HFPQMSATGNDIWIFNS 421 (592)
Q Consensus 382 tdYDRVLYLDaD~LVl~n-IDeLF----dlp~iaAvpD~~~yFNS 421 (592)
..||-|+.+|||+++..+ |..+. .-|.++++.-+..++|.
T Consensus 94 ~~~~~i~~~DaD~~~~p~~l~~~v~~~~~~~~vg~vq~~~~~~n~ 138 (254)
T cd04191 94 SRYDYMVVLDADSLMSGDTIVRLVRRMEANPRAGIIQTAPKLIGA 138 (254)
T ss_pred CCCCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEeCCceeECC
Confidence 478999999999999887 33333 34567777434444553
No 77
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=21.70 E-value=61 Score=34.88 Aligned_cols=20 Identities=25% Similarity=0.297 Sum_probs=16.4
Q ss_pred cccCcceEEEEecCeeeccC
Q 007705 380 QLTDYDKIIFIDADIIVLRN 399 (592)
Q Consensus 380 ~LtdYDRVLYLDaD~LVl~n 399 (592)
+...+|-++++|+|+++-.+
T Consensus 123 ~~a~ge~i~~~DaD~~~~p~ 142 (373)
T TIGR03472 123 PHARHDILVIADSDISVGPD 142 (373)
T ss_pred HhccCCEEEEECCCCCcChh
Confidence 34579999999999998654
No 78
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=21.48 E-value=2.4e+02 Score=31.27 Aligned_cols=96 Identities=13% Similarity=0.060 Sum_probs=47.2
Q ss_pred CCCCEEEEEEeecChhhHHHHHHHHHHHHHhC-CCCcE-EEEECCCCCHHHHHHHHH---cCCEEEEEeeccCccccccc
Q 007705 293 IAKREAYATVLHSSEAYVCGAITLAQSLRKTG-TKRDL-VLLIDNSISIPKREALTA---AGWKIRIIKRIRNPRAEKKT 367 (592)
Q Consensus 293 ~~~r~AYVTlLtsdd~Yl~gAlVL~~SLr~~n-s~~dL-vVLvtd~ise~~r~~L~~---~g~~Ii~V~~i~~p~~~~~~ 367 (592)
..++.+.+.-.+..+++ ..-++.||.... +...+ +++++|+-++++.+.+++ .+..+. +..+....+....
T Consensus 47 ~~P~vsVIIP~yNe~~~---l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v~-v~~~~~~~Gka~A 122 (439)
T TIGR03111 47 KLPDITIIIPVYNSEDT---LFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGLS-LRYMNSDQGKAKA 122 (439)
T ss_pred CCCCEEEEEEeCCChHH---HHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCeE-EEEeCCCCCHHHH
Confidence 34456666555544433 445667776543 22233 456677777766655543 322222 1111111111010
Q ss_pred CCccceeeeecccccCcceEEEEecCeeeccC
Q 007705 368 YNEYNYSKFRLWQLTDYDKIIFIDADIIVLRN 399 (592)
Q Consensus 368 ~~~~tytKL~iw~LtdYDRVLYLDaD~LVl~n 399 (592)
.+ ...+....|-|+++|+|.++-.|
T Consensus 123 lN-------~gl~~s~g~~v~~~DaD~~~~~d 147 (439)
T TIGR03111 123 LN-------AAIYNSIGKYIIHIDSDGKLHKD 147 (439)
T ss_pred HH-------HHHHHccCCEEEEECCCCCcChH
Confidence 11 12223446679999999998654
No 79
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=21.38 E-value=2.4e+02 Score=29.87 Aligned_cols=92 Identities=23% Similarity=0.264 Sum_probs=45.5
Q ss_pred CCEEEEEEeecChhhHHHHHHHHHHHHHhCC-CC-cEEEEECCCCCHHHHHHHHHcCCEEEEEe-eccC-cc-cccccCC
Q 007705 295 KREAYATVLHSSEAYVCGAITLAQSLRKTGT-KR-DLVLLIDNSISIPKREALTAAGWKIRIIK-RIRN-PR-AEKKTYN 369 (592)
Q Consensus 295 ~r~AYVTlLtsdd~Yl~gAlVL~~SLr~~ns-~~-dLvVLvtd~ise~~r~~L~~~g~~Ii~V~-~i~~-p~-~~~~~~~ 369 (592)
.+...+.-.+..+.++. -++.||..... .. .=+|+++++-++.+.+.+++.+.+++... .+.. +. ..++
T Consensus 31 ~~vSVVIPayNee~~I~---~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~~~~~v~~~~~~~~~~~~n~Gkg--- 104 (306)
T PRK13915 31 RTVSVVLPALNEEETVG---KVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAAAGARVVSREEILPELPPRPGKG--- 104 (306)
T ss_pred CCEEEEEecCCcHHHHH---HHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHHhcchhhcchhhhhccccCCCHH---
Confidence 34444443333333433 44556654321 11 23455677777777788888776654321 1110 11 0010
Q ss_pred ccceeeeecccccCcceEEEEecCee
Q 007705 370 EYNYSKFRLWQLTDYDKIIFIDADII 395 (592)
Q Consensus 370 ~~tytKL~iw~LtdYDRVLYLDaD~L 395 (592)
.+. .........|-|+++|+|..
T Consensus 105 -~A~--~~g~~~a~gd~vv~lDaD~~ 127 (306)
T PRK13915 105 -EAL--WRSLAATTGDIVVFVDADLI 127 (306)
T ss_pred -HHH--HHHHHhcCCCEEEEEeCccc
Confidence 000 01223456799999999997
No 80
>PF05704 Caps_synth: Capsular polysaccharide synthesis protein; InterPro: IPR008441 This entry consists of several capsular polysaccharide proteins. Capsular polysaccharide (CPS) is a major virulence factor in Streptococcus pneumoniae. This family is often transcribed with putative glycosyl transferases to give rise to bifunctional proteins [].
Probab=21.25 E-value=1.3e+02 Score=31.67 Aligned_cols=129 Identities=15% Similarity=0.122 Sum_probs=70.5
Q ss_pred CCCCCEEEEEEeecChhhHHHHHHHHHHHHHhCCCCcEEEEECCCCCH------HHHHHHHHcCCEEEEEeeccCccccc
Q 007705 292 KIAKREAYATVLHSSEAYVCGAITLAQSLRKTGTKRDLVLLIDNSISI------PKREALTAAGWKIRIIKRIRNPRAEK 365 (592)
Q Consensus 292 ~~~~r~AYVTlLtsdd~Yl~gAlVL~~SLr~~ns~~dLvVLvtd~ise------~~r~~L~~~g~~Ii~V~~i~~p~~~~ 365 (592)
....+..|+--.-+-++-=.-+..++.|++++.+++++++|..+.+.+ ...++++.
T Consensus 42 ~~~~k~IW~~W~QG~e~aP~~Vk~ci~s~~k~~~~~~Vi~lt~~Ni~~Yv~~P~~i~~k~~~------------------ 103 (276)
T PF05704_consen 42 ETNEKIIWVCWWQGEENAPEIVKKCINSWRKNAPDYEVILLTEDNIKDYVDIPDFILEKYEK------------------ 103 (276)
T ss_pred CCCCCcEEEEECCCccccCHHHHHHHHHHHHHCCCCeEEEEChHHHHHHcCCchhHHHHHHc------------------
Confidence 345556888776443333223468999999999999999987554322 11111111
Q ss_pred ccCCc---cceeeeecccccCcceEEEEecCeeeccCchhhhC-CCCceee-cC-CC-----cceeceEEEEeCCHHHHH
Q 007705 366 KTYNE---YNYSKFRLWQLTDYDKIIFIDADIIVLRNLDLLFH-FPQMSAT-GN-DI-----WIFNSGIMVIEPSNCTFR 434 (592)
Q Consensus 366 ~~~~~---~tytKL~iw~LtdYDRVLYLDaD~LVl~nIDeLFd-lp~iaAv-pD-~~-----~yFNSGVMVInPs~~~fe 434 (592)
+..+. .-+.|+.+ |..|- =+++||++++.+++++.+. .+.++-. ++ .. ..+.+++|.-.+....+.
T Consensus 104 g~i~~a~~SDilR~~L--L~~yG-GvWiDatv~~t~~l~~~~~~~~ff~~~~~~~~~~~~~~~~w~~~fi~a~~~n~~~~ 180 (276)
T PF05704_consen 104 GKISPAHFSDILRLAL--LYKYG-GVWIDATVYLTKPLDDEIFDSDFFSFSRPDKDYNPISISSWTNFFIAAKKGNPFIK 180 (276)
T ss_pred CCCchhHHHHHHHHHH--HHHcC-cEEeCCceEECCchhHHHhcCCeeEEeccCcCcccchHHHhHhhheeECCCCHHHH
Confidence 10110 12333332 22332 2799999999999997754 3432211 11 11 133445666667666665
Q ss_pred HHHHHHH
Q 007705 435 ILMSKRK 441 (592)
Q Consensus 435 ~Lle~~~ 441 (592)
.+.+.+.
T Consensus 181 ~~~~~~~ 187 (276)
T PF05704_consen 181 FWRDLLL 187 (276)
T ss_pred HHHHHHH
Confidence 5555443
No 81
>PF03193 DUF258: Protein of unknown function, DUF258; InterPro: IPR004881 This entry contains Escherichia coli (strain K12) RsgA, which may play a role in 30S ribosomal subunit biogenesis. RsgA is an unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover. It is dispensible for viability, but important for overall fitness. The intrinsic GTPase activity is stimulated by the presence of 30S (160-fold increase in kcat) or 70S (96 fold increase in kcat) ribosomes []. The GTPase is inhibited by aminoglycoside antibiotics such as neomycin and paromycin [] streptomycin and spectinomycin []. This inhibition is not due to competition for binding sites on the 30S or 70S ribosome []. ; GO: 0003924 GTPase activity, 0005525 GTP binding; PDB: 2YKR_W 2YV5_A 1T9H_A 2RCN_A 4A2I_V 1U0L_B.
Probab=20.67 E-value=58 Score=31.69 Aligned_cols=26 Identities=27% Similarity=0.583 Sum_probs=21.8
Q ss_pred ccccccccccccchhhHHHHHHhhhc
Q 007705 55 VRCSLRECHHKVEKSMKMEAILEEST 80 (592)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (592)
-.|.|++|.|..|.|-.+++++++..
T Consensus 122 ~~CkF~~C~H~~Ep~CaV~~av~~g~ 147 (161)
T PF03193_consen 122 GQCKFRDCTHIHEPGCAVKAAVENGE 147 (161)
T ss_dssp THSSSTTTTSSSSTT-HHHHHHHTTS
T ss_pred CCCCccCCCCCCCCCChHHHHHHCCC
Confidence 57999999999999999999998543
No 82
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=20.47 E-value=85 Score=28.90 Aligned_cols=87 Identities=14% Similarity=0.126 Sum_probs=41.5
Q ss_pred HHHHHHHHHHhCC---CCcEEEEECCCCCHHHHHHHHHcCCEEEEEeeccCcccccccCCccceeeeecccccCcceEEE
Q 007705 313 AITLAQSLRKTGT---KRDLVLLIDNSISIPKREALTAAGWKIRIIKRIRNPRAEKKTYNEYNYSKFRLWQLTDYDKIIF 389 (592)
Q Consensus 313 AlVL~~SLr~~ns---~~dLvVLvtd~ise~~r~~L~~~g~~Ii~V~~i~~p~~~~~~~~~~tytKL~iw~LtdYDRVLY 389 (592)
..-++.||.+... .+.+ ++++++-++...+.+++.+.+...+..+..+... + .....-...+...-|-+++
T Consensus 12 l~~~l~sl~~~~~~~~~~ei-ivvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~n~-G----~~~a~n~g~~~a~gd~i~~ 85 (185)
T cd04179 12 IPELVERLLAVLEEGYDYEI-IVVDDGSTDGTAEIARELAARVPRVRVIRLSRNF-G----KGAAVRAGFKAARGDIVVT 85 (185)
T ss_pred HHHHHHHHHHHhccCCCEEE-EEEcCCCCCChHHHHHHHHHhCCCeEEEEccCCC-C----ccHHHHHHHHHhcCCEEEE
Confidence 4456677766532 3343 3445554455555565543322111112111110 0 0111112223334488999
Q ss_pred EecCeeeccC-chhhhC
Q 007705 390 IDADIIVLRN-LDLLFH 405 (592)
Q Consensus 390 LDaD~LVl~n-IDeLFd 405 (592)
||+|..+..+ ++.|..
T Consensus 86 lD~D~~~~~~~l~~l~~ 102 (185)
T cd04179 86 MDADLQHPPEDIPKLLE 102 (185)
T ss_pred EeCCCCCCHHHHHHHHH
Confidence 9999888655 555655
Done!