Query 007708
Match_columns 592
No_of_seqs 198 out of 826
Neff 5.1
Searched_HMMs 46136
Date Thu Mar 28 14:16:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007708.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007708hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00148 potassium transporter 100.0 6E-197 1E-201 1633.1 53.3 587 1-592 196-785 (785)
2 PLN00149 potassium transporter 100.0 3E-195 6E-200 1621.4 54.1 576 2-592 198-779 (779)
3 PLN00151 potassium transporter 100.0 8E-194 2E-198 1606.6 52.9 571 1-592 273-852 (852)
4 PLN00150 potassium ion transpo 100.0 4E-193 8E-198 1601.4 53.1 567 1-592 213-779 (779)
5 TIGR00794 kup potassium uptake 100.0 8E-174 2E-178 1439.9 50.0 521 1-592 167-688 (688)
6 PRK10745 trkD potassium transp 100.0 1E-157 3E-162 1293.3 45.4 478 1-592 142-622 (622)
7 PF02705 K_trans: K+ potassium 100.0 2E-149 4E-154 1220.0 33.2 404 1-407 131-534 (534)
8 COG3158 Kup K+ transporter [In 100.0 2E-144 5E-149 1163.1 42.4 480 1-591 147-626 (627)
9 TIGR00911 2A0308 L-type amino 92.6 0.44 9.6E-06 53.0 8.7 85 4-92 167-255 (501)
10 COG0531 PotE Amino acid transp 84.1 13 0.00027 40.2 12.3 174 3-183 135-324 (466)
11 PRK10435 cadB lysine/cadaverin 82.9 35 0.00076 37.4 15.2 22 6-27 125-146 (435)
12 TIGR00909 2A0306 amino acid tr 82.7 22 0.00047 38.5 13.4 166 6-184 137-317 (429)
13 PRK10655 potE putrescine trans 82.4 38 0.00082 36.9 15.2 41 6-46 127-170 (438)
14 TIGR03813 put_Glu_GABA_T putat 81.9 34 0.00073 37.9 14.7 19 283-301 434-452 (474)
15 TIGR00907 2A0304 amino acid pe 78.3 18 0.00039 40.0 11.1 25 283-307 454-478 (482)
16 PRK15049 L-asparagine permease 75.2 1.1E+02 0.0025 34.3 16.5 22 5-26 147-168 (499)
17 TIGR00930 2a30 K-Cl cotranspor 72.9 42 0.0009 41.3 13.1 22 5-26 206-227 (953)
18 PRK11021 putative transporter; 72.3 1.2E+02 0.0025 33.0 15.2 26 4-29 117-142 (410)
19 TIGR03810 arg_ornith_anti argi 68.0 1E+02 0.0023 34.1 14.0 44 141-184 274-317 (468)
20 TIGR00906 2A0303 cationic amin 67.4 1.5E+02 0.0033 34.0 15.5 42 5-46 164-208 (557)
21 PF13520 AA_permease_2: Amino 63.0 60 0.0013 34.9 10.6 221 4-240 120-367 (426)
22 KOG3145 Cystine transporter Cy 63.0 13 0.00027 39.9 5.2 88 6-104 213-340 (372)
23 PF14362 DUF4407: Domain of un 62.2 62 0.0013 33.9 10.3 85 222-307 13-111 (301)
24 TIGR00905 2A0302 transporter, 60.0 1.2E+02 0.0026 33.7 12.5 43 142-184 279-321 (473)
25 PRK10249 phenylalanine transpo 54.3 1.3E+02 0.0029 33.2 11.7 101 6-108 139-247 (458)
26 PRK10644 arginine:agmatin anti 54.0 2.3E+02 0.0051 31.0 13.5 22 6-27 129-150 (445)
27 COG4059 MtrE Tetrahydromethano 53.0 13 0.00028 38.3 3.2 39 270-308 243-287 (304)
28 TIGR00908 2A0305 ethanolamine 52.7 1E+02 0.0022 33.7 10.4 23 5-27 124-146 (442)
29 PRK10746 putative transport pr 51.4 2.1E+02 0.0046 31.8 12.8 26 283-308 427-452 (461)
30 PRK11357 frlA putative fructos 51.3 2.4E+02 0.0052 30.9 13.0 42 5-46 130-174 (445)
31 TIGR01773 GABAperm gamma-amino 50.8 3.7E+02 0.0081 29.5 15.3 44 5-48 129-175 (452)
32 TIGR00910 2A0307_GadC glutamat 45.8 4E+02 0.0087 30.1 14.0 46 80-125 202-249 (507)
33 PF06570 DUF1129: Protein of u 45.0 99 0.0021 30.8 8.1 21 282-302 179-199 (206)
34 PRK10580 proY putative proline 43.7 2.4E+02 0.0053 31.0 11.7 25 281-305 423-447 (457)
35 TIGR03428 ureacarb_perm permea 42.8 5.1E+02 0.011 28.7 16.6 23 5-27 147-169 (475)
36 PRK11387 S-methylmethionine tr 42.6 2.7E+02 0.0058 30.9 11.8 29 80-108 214-244 (471)
37 PRK10238 aromatic amino acid t 42.4 2.2E+02 0.0048 31.5 11.1 43 78-121 206-250 (456)
38 KOG4742 Predicted chitinase [G 40.3 13 0.00027 39.5 0.9 33 95-136 172-210 (286)
39 KOG3643 GABA receptor [Signal 39.4 25 0.00055 39.4 3.1 90 177-270 225-324 (459)
40 TIGR00913 2A0310 amino acid pe 33.4 6.9E+02 0.015 27.5 15.6 28 81-108 206-235 (478)
41 PRK11049 D-alanine/D-serine/gl 31.1 5.5E+02 0.012 28.5 12.0 106 78-184 217-333 (469)
42 PF02660 G3P_acyltransf: Glyce 30.0 5.4E+02 0.012 25.3 10.4 85 214-308 90-176 (178)
43 PF05313 Pox_P21: Poxvirus P21 28.2 95 0.0021 31.1 4.7 59 107-176 90-149 (189)
44 PF05545 FixQ: Cbb3-type cytoc 24.0 68 0.0015 24.9 2.4 28 292-319 20-47 (49)
45 PRK14417 membrane protein; Pro 23.8 6E+02 0.013 26.5 9.7 18 216-233 101-118 (232)
46 cd05900 Ig_Aggrecan Immunoglob 23.5 1.1E+02 0.0023 27.8 3.9 28 383-410 75-102 (112)
47 PRK14419 membrane protein; Pro 23.3 7.8E+02 0.017 24.8 11.3 25 214-238 98-122 (199)
48 PRK13108 prolipoprotein diacyl 23.0 3.5E+02 0.0077 30.8 8.6 20 224-243 23-42 (460)
49 PRK11492 hyfE hydrogenase 4 me 22.8 8.3E+02 0.018 24.9 12.2 130 179-324 78-214 (216)
50 PF06155 DUF971: Protein of un 22.0 51 0.0011 28.4 1.5 15 561-575 25-39 (89)
51 PRK00701 manganese transport p 21.8 5.7E+02 0.012 28.7 10.0 33 198-230 104-136 (439)
52 PF13937 DUF4212: Domain of un 21.1 4.8E+02 0.01 22.8 7.2 57 249-306 6-70 (81)
53 PF08733 PalH: PalH/RIM21; In 20.5 5.4E+02 0.012 28.1 9.2 135 164-307 168-321 (348)
54 PF05297 Herpes_LMP1: Herpesvi 20.1 35 0.00075 36.5 0.0 60 246-308 126-190 (381)
No 1
>PLN00148 potassium transporter; Provisional
Probab=100.00 E-value=5.8e-197 Score=1633.06 Aligned_cols=587 Identities=61% Similarity=1.079 Sum_probs=529.0
Q ss_pred CeehhHHHHHHHHHhhccccccchhhhhhhHHHHHHHHHHHhhHHhhcccCcceeeecChHHHHHHHHhcCccceeeccc
Q 007708 1 MVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAG 80 (592)
Q Consensus 1 ~vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~vWf~~i~~~Giyni~~~~p~Vl~A~nP~y~i~f~~~~~~~g~~~LG~ 80 (592)
+||||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+||||+|+++||++||++||.+|||
T Consensus 196 ~vv~is~~ILv~LF~vQ~~GT~kVg~~FgPIm~lWf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LGg 275 (785)
T PLN00148 196 ELVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGLYNIIHWNPKIIHALSPYYIIKFFRVTGKDGWISLGG 275 (785)
T ss_pred eehhHHHHHHHHHHHHhccccHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCHHHhhhcCHHHHHHHHHhCCCceEEeecc
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccchhhhhhccCCCCccceeeehhhhhhhHHHHhhcccchhhccccccccCcccccccCcchHHHHHHHHHHHHHh
Q 007708 81 LFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVA 160 (592)
Q Consensus 81 v~L~iTG~EALyADlGHFg~~~I~~aw~~~V~P~L~L~Y~GQ~A~ll~~p~~~~npFf~~~P~~~~~P~~vlAtlAaIIA 160 (592)
|+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||+|++||+|||||
T Consensus 276 V~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~L~L~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIA 355 (785)
T PLN00148 276 ILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQAAFLSKNIPSIPNSFYDSIPDPVFWPVFVIATLAAIVG 355 (785)
T ss_pred hheeccchhhhhhhccCCCccceEEeeeehHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhHHHHHHcCCCCcceEEecCCccCCcccchhhHHHHHHHhhheeEEecCchhHHHhhhhhhhhHHHHHHH
Q 007708 161 SQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTL 240 (592)
Q Consensus 161 SQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiaV~~~m~iTT~ 240 (592)
|||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||||||+||++||++||+
T Consensus 356 SQA~ISg~FSi~~Qai~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~la~AYGiAV~~vM~iTT~ 435 (785)
T PLN00148 356 SQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAVTIGFRDTTLIGNAYGLACMTVMFITTF 435 (785)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHHhheeeccchhHHHhhhhheeeHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhccccCCchHHHHHHHHHHHHHHHHHHhHHHHHhhhhcCCCChHH
Q 007708 241 LTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKW 320 (592)
Q Consensus 241 L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~K~~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~ 320 (592)
|+++||+.+||||++++++|+++|+++|++|||||+.||+||||+|+++|++++++|++||||++++++++.+|++|+++
T Consensus 436 L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~~~~~~ 515 (785)
T PLN00148 436 LMALVIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYIWHYGTRKKYNFDLHNKVSLKW 515 (785)
T ss_pred HHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCccCCcEEEEeCCCCCchhhHHhhhhhCcccceEEEEEEEEEeeccccCCCceEEEEeecCCCCcEEEEE
Q 007708 321 ILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCI 400 (592)
Q Consensus 321 ~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhe~~vfv~i~~~~vP~V~~~eR~~v~~l~~~~~~~yR~v 400 (592)
+.++.++.++.||||+|+|||++++|+|++|.||++|+|++||++||||||++|+|+||++|||+++|+++++||+|||+
T Consensus 516 ~~~l~~~~~~~RVpG~~vf~t~~~~gvP~~f~h~~~~~~~lHe~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~yr~~r~v 595 (785)
T PLN00148 516 LLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCI 595 (785)
T ss_pred HHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEE
Confidence 99999888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeecccCCCchhhHHHHHHHHHHHHHhhhccCC-C-C-CCCCCCcceeeecccccccccccccCCcccccCCCCCCcc
Q 007708 401 VRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEGFT-N-L-DAPVDGWLAVVRTSEKFGKRLARSESDSKEESCSSSFPIT 477 (592)
Q Consensus 401 vryGY~d~~~~~~~f~~~lv~~L~eFI~~e~~~~~-~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (592)
+||||||.+++++|||++|+++|++|||+|+...+ + + .++.|++++++++++...++....+++ +..+.++..
T Consensus 596 vryGy~d~~~~~~dFe~~Lv~~L~~FIr~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~- 671 (785)
T PLN00148 596 VRYGYKDIQRDDGDFENMLVQSIAEFIQMEAEEPQSSASESSSNDGRMAVISTRDVQSSSLLMVSEQ---ELADIDDSI- 671 (785)
T ss_pred EEEccCcccccchHHHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccccccccccc---ccccccccc-
Confidence 99999999988899999999999999999975321 0 1 111144555554332111110000000 000000000
Q ss_pred CCCCCCchhhhhhcccccCCCCCCCCCcccccccCccccchhHHHHHHHHHHHHhcCcEEEeeecEEEecCCCChhHHHH
Q 007708 478 GSCSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFV 557 (592)
Q Consensus 478 ~s~~~~~~~~~~~s~~~~~~~~~~~~~~v~f~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~v~ar~~Ss~lKk~v 557 (592)
.+ +++.+.+..++.++.+++...+++|++|+.+++.+.+++++||+++|++|||+||+||+||++|||||+|||+||++
T Consensus 672 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KKiv 750 (785)
T PLN00148 672 QS-SKSLTLQSLQSAYEDENPGQSRRRRVRFQLPENPGMDPSVREELMDLIEAKEAGVAYIMGHSYVKARRSSSFLKKLA 750 (785)
T ss_pred cc-ccccccccccccccccccccccccceeecccccccccchHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHH
Confidence 00 01112223333344444444567789998766555678999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCcccccCCCCeEEeeeEEEC
Q 007708 558 INVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL 592 (592)
Q Consensus 558 In~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 592 (592)
||++|+|||||||+|.++|+|||+|||||||+|||
T Consensus 751 In~~Y~FLRkNcR~~~~~L~IPh~~LleVGM~Y~V 785 (785)
T PLN00148 751 IDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 785 (785)
T ss_pred HHHHHHHHHHhccCcccccCCChHHeEEcceEEEC
Confidence 99999999999999999999999999999999997
No 2
>PLN00149 potassium transporter; Provisional
Probab=100.00 E-value=2.6e-195 Score=1621.41 Aligned_cols=576 Identities=52% Similarity=0.952 Sum_probs=521.1
Q ss_pred eehhHHHHHHHHHhhccccccchhhhhhhHHHHHHHHHHHhhHHhhcccCcceeeecChHHHHHHHHhcCccceeeccce
Q 007708 2 VVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGL 81 (592)
Q Consensus 2 vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~vWf~~i~~~Giyni~~~~p~Vl~A~nP~y~i~f~~~~~~~g~~~LG~v 81 (592)
||||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+||+|+++||++||++||.+||||
T Consensus 198 vv~is~~ILv~LF~~Q~~GT~kvg~~FgPIml~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~f~~~~~~~g~~~LGgV 277 (779)
T PLN00149 198 EVPVACIILIGLFALQHYGTHRVGFLFAPVVLTWLLCISAIGVYNIFHWNPHVYQALSPYYMYKFLKKTQRGGWMSLGGI 277 (779)
T ss_pred ehHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHhHhhhcCHHHHHHHHHHCCCceeEeecch
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccchhhhhhccCCCCccceeeehhhhhhhHHHHhhcccchhhccccc---cccCcccccccCcchHHHHHHHHHHHH
Q 007708 82 FLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFS---AAPLSFHASIPDPLRWPVLVVATLAAI 158 (592)
Q Consensus 82 ~L~iTG~EALyADlGHFg~~~I~~aw~~~V~P~L~L~Y~GQ~A~ll~~p~---~~~npFf~~~P~~~~~P~~vlAtlAaI 158 (592)
+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||+ +.+||||+++|+|++||++++||+|||
T Consensus 278 ~L~iTG~EALyADlGHF~~~~Ir~aw~~~V~P~L~L~Y~GQaA~l~~~p~~~~~~~~pFy~~iP~~~~~P~~vlAtlAaI 357 (779)
T PLN00149 278 LLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSKHHVIESDYRIGFYVSVPEKLRWPVLVIAILAAV 357 (779)
T ss_pred hhcccchhhhhhcccCCCccceeeeehhhHHHHHHHHhhhHHHHHhcCcchhccccCcHHHhCCchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999996 566799999999999999999999999
Q ss_pred HhhhhhhhhhhhhHHHHHHcCCCCcceEEecCCccCCcccchhhHHHHHHHhhheeEEecCchhHHHhhhhhhhhHHHHH
Q 007708 159 VASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVS 238 (592)
Q Consensus 159 IASQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiaV~~~m~iT 238 (592)
|||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||||||+||++||++|
T Consensus 358 IASQA~ISg~FSii~Qa~~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iT 437 (779)
T PLN00149 358 VGSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIPEINWTLMLLCLAVTVGFRDTKRLGNASGLAVITVMLVT 437 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHHHHHHHHHHHHhheeEecChHHHHHHhhhhhehHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhccccCCchHHHHHHHHHHHHHHHHHHhHHHHHhhhhcCCCCh
Q 007708 239 TLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPM 318 (592)
Q Consensus 239 T~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~K~~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~ 318 (592)
|+|+++||+.+||||++++++|+++|+++|++|||||+.||+||||+|+++|++++++|++||||++++|+++.++++|+
T Consensus 438 T~L~~lv~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~ 517 (779)
T PLN00149 438 TCLMSLVIVLCWHKSVLLAICFIFFFGTIEALYFSASLIKFLEGAWVPIALSFIFLLVMYVWHYGTLKRYEFDVQNKVSI 517 (779)
T ss_pred HHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCccCCcEEEEeCCCCCchhhHHhhhhhCcccceEEEEEEEEEeeccccCCCceEEEEeecCCCCcEEE
Q 007708 319 KWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYR 398 (592)
Q Consensus 319 ~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhe~~vfv~i~~~~vP~V~~~eR~~v~~l~~~~~~~yR 398 (592)
+++.++.++.++.||||+|+|||++.+|+|++|.||++|+|++||++||||||++|+|+||++|||+++|++++++|+||
T Consensus 518 ~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~~~~~~~lhe~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~~~~~r 597 (779)
T PLN00149 518 NWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGRIGPKEYRLYR 597 (779)
T ss_pred HHHHHhccCCCCcccCcEEEEEcCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEE
Confidence 99999999888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeecccCCCchhhHHHHHHHHHHHHHhhhccCCC-CC--CCCCCcceeeecccccccccccccCCcccccCCCCCC
Q 007708 399 CIVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEGFTN-LD--APVDGWLAVVRTSEKFGKRLARSESDSKEESCSSSFP 475 (592)
Q Consensus 399 ~vvryGY~d~~~~~~~f~~~lv~~L~eFI~~e~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (592)
|++||||||..++++|||++|+++|++|||+|+.+.++ ++ .++|++++++++++...++....+.+ . +.
T Consensus 598 ~vvryGy~d~~~d~~dFE~~Lve~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~--- 669 (779)
T PLN00149 598 CIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSEKPEPNGAPENEEGEDERMTVVGTCSTHLEGIQLREDD----S-DK--- 669 (779)
T ss_pred EEEEEeeccccccchHHHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccccccccccc----c-cc---
Confidence 99999999999989999999999999999999743211 11 11245566654432211110000000 0 00
Q ss_pred ccCCCCCCchhhhhhcccccCCCCCCCCCcccccccCccccchhHHHHHHHHHHHHhcCcEEEeeecEEEecCCCChhHH
Q 007708 476 ITGSCSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKR 555 (592)
Q Consensus 476 ~~~s~~~~~~~~~~~s~~~~~~~~~~~~~~v~f~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~v~ar~~Ss~lKk 555 (592)
. .+ .++++.++.++. +. ...++|++|+.+++.+.+++++||+++|++|||+||+||+||++|||||+|||+||
T Consensus 670 ~-~~-~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KK 742 (779)
T PLN00149 670 Q-EP-AGTSELREIRSP---PV--SRPKKRVRFVVPESPKIDRGAREELQELMEAREAGMAYILGHSYVRAKQGSSMMKK 742 (779)
T ss_pred c-cc-ccccccccccCc---cc--cCcccceeeccccccccchhHHHHHHHHHHHHHcCcEEEecCceEEEcCCCcHHHH
Confidence 0 00 001111111111 11 12236788887766666789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCcccccCCCCeEEeeeEEEC
Q 007708 556 FVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL 592 (592)
Q Consensus 556 ~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 592 (592)
++|||+|+|||||||+|.++|+|||+|||||||+|||
T Consensus 743 ~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 779 (779)
T PLN00149 743 LVINYGYDFLRRNSRGPRYALSVPHASTLEVGMVYHV 779 (779)
T ss_pred HHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 9999999999999999999999999999999999997
No 3
>PLN00151 potassium transporter; Provisional
Probab=100.00 E-value=8.5e-194 Score=1606.55 Aligned_cols=571 Identities=42% Similarity=0.782 Sum_probs=509.3
Q ss_pred CeehhHHHHHHHHHhhccccccchhhhhhhHHHHHHHHHHHhhHHhhcccCcceeeecChHHHHHHHHhcCccceeeccc
Q 007708 1 MVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAG 80 (592)
Q Consensus 1 ~vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~vWf~~i~~~Giyni~~~~p~Vl~A~nP~y~i~f~~~~~~~g~~~LG~ 80 (592)
+||||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+||||+|+++||++||++||.+|||
T Consensus 273 ~VV~Is~~ILv~LF~~Q~~GT~kVg~~FgPImllWFl~i~~iGiynI~~~~p~Vl~AlnP~Y~~~Ff~~~~~~gw~~LGg 352 (852)
T PLN00151 273 AVVMISVAFLVILFSVQRFGTSKVGFAFGPALALWFCSLGGIGIYNLVKYDSSVFRAFNPVYIYYFFKRNSTKAWSALGG 352 (852)
T ss_pred eehhHHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHHHHHHHHhcCHHHHhhhCHHHHHHHHHhCCCceEEEecc
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccchhhhhhccCCCCccceeeehhhhhhhHHHHhhcccchhhccccccccCcccccccCcchHHHHHHHHHHHHHh
Q 007708 81 LFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVA 160 (592)
Q Consensus 81 v~L~iTG~EALyADlGHFg~~~I~~aw~~~V~P~L~L~Y~GQ~A~ll~~p~~~~npFf~~~P~~~~~P~~vlAtlAaIIA 160 (592)
|+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||+|++||+|||||
T Consensus 353 VvLciTGaEALfADLGHFg~~sIqiaw~~~V~P~LlL~Y~GQaA~L~~~p~~~~npFy~svP~~~~wP~~vlAtlAaIIA 432 (852)
T PLN00151 353 CVLCATGSEAMFADLGYFSVRSIQLAFTCLVLPCLLLAYMGQAAYLMKNPDSAEQIFFSSVPSSLFWPVFLIANLAALIA 432 (852)
T ss_pred eeeeeccchhhhcccCCCCccceeeeehhhHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhHHHHHHcCCCCcceEEecCCccCCcccchhhHHHHHHHhhheeEEecCchhHHHhhhhhhhhHHHHHHH
Q 007708 161 SQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTL 240 (592)
Q Consensus 161 SQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiaV~~~m~iTT~ 240 (592)
|||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|++||++||||++||||||+||++||++||+
T Consensus 433 SQA~ISgtFSii~Qai~Lg~fPRvkIvHTS~~~~GQIYIP~vNw~Lmv~~i~v~l~F~~s~~l~~AYGiAV~~vM~iTT~ 512 (852)
T PLN00151 433 SRAMTTATFSCIKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVMCLVVVCSFRSITDIGNAYGIAEVGVMMVSTI 512 (852)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHhheeeecCHHHHHHHhhhhhhhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhccccCCchHHHHHHHHHHHHHHHHHHhHHHHHhhhhcCCCChHH
Q 007708 241 LTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKW 320 (592)
Q Consensus 241 L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~K~~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~ 320 (592)
|+++||+.+||||++++++|+++|+++|++|||||+.||+||||+||++|++++++|++||||++++|+++.+|++|+++
T Consensus 513 L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~yG~~~~~~~~~~~~vs~~~ 592 (852)
T PLN00151 513 LVTLVMLLIWQTNIFLVLCFPVVFLSVELVFFSSVLSSVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKLSMDL 592 (852)
T ss_pred HHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCccCCcEEEEeCCCCCchhhHHhhhhhCcccceEEEEEEEEEeeccccCCCceEEEEeecCCCCcEEEEE
Q 007708 321 ILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCI 400 (592)
Q Consensus 321 ~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhe~~vfv~i~~~~vP~V~~~eR~~v~~l~~~~~~~yR~v 400 (592)
+.++.++.++.||||+|+|||++++|+|++|.||++|+|++||++||||||++|+|+||++|||+++|++++++++|||+
T Consensus 593 ~~~L~~~~~~~RVpGiglf~t~~~~gvP~~f~h~i~~~~alHe~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~~~~~yr~v 672 (852)
T PLN00151 593 MRELGSNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCI 672 (852)
T ss_pred HHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEcCCCCCCEEEEE
Confidence 99999999899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeecccCC-CchhhHHHHHHHHHHHHHhhhccCC--CCCCCC--CC---cceeeecccccccccccccCCcccccCCC
Q 007708 401 VRNGYKDVPN-SGDDFENDIVMSIAEFIQMEAEGFT--NLDAPV--DG---WLAVVRTSEKFGKRLARSESDSKEESCSS 472 (592)
Q Consensus 401 vryGY~d~~~-~~~~f~~~lv~~L~eFI~~e~~~~~--~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (592)
+||||||.++ +++|||++|+++|++|||+|+.... +++.++ ++ +++.....+..... + .+...
T Consensus 673 vrYGY~D~~~~~~~dFe~~Lv~~l~~fi~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~ 743 (852)
T PLN00151 673 ARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERALESDGNDDTDDEDSVTSSRVLIAPNGSVY----S-----LGVPL 743 (852)
T ss_pred EEEeecccccccchHHHHHHHHHHHHHHHhhhhhccccccccccccccccccccccccCCCcccc----c-----ccccc
Confidence 9999999986 7789999999999999999874311 100000 00 11111110000000 0 00000
Q ss_pred CCCccCCCCCCchhh-hhhcccccCCCCCCCCCcccccccCccccchhHHHHHHHHHHHHhcCcEEEeeecEEEecCCCC
Q 007708 473 SFPITGSCSKSPALQ-KLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAP 551 (592)
Q Consensus 473 ~~~~~~s~~~~~~~~-~~~s~~~~~~~~~~~~~~v~f~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~v~ar~~Ss 551 (592)
++...+++...+ +.++. +.+++ ..+++++ .+.+++++||+++|++|||+||+||+||++|||||+|+
T Consensus 744 ---~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~-----~~~~~~~~~El~~l~~a~e~Gv~yilG~~~v~a~~~S~ 811 (852)
T PLN00151 744 ---LADYRLTSKPIPEASTSE-EVSPV---LPSSSMS-----SDEDQSLEYELSFIREAKESGVVYLLGHGDVRARKNSW 811 (852)
T ss_pred ---cccccccccccccccccc-ccccc---ccccccc-----cccCccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCc
Confidence 000000000000 00110 00111 0123443 22357899999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhhcCCCCcccccCCCCeEEeeeEEEC
Q 007708 552 FLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL 592 (592)
Q Consensus 552 ~lKk~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 592 (592)
|+||++||++|+|||||||+|.++|+|||++||||||+|||
T Consensus 812 ~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v 852 (852)
T PLN00151 812 FIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV 852 (852)
T ss_pred HHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 99999999999999999999999999999999999999997
No 4
>PLN00150 potassium ion transporter family protein; Provisional
Probab=100.00 E-value=3.8e-193 Score=1601.45 Aligned_cols=567 Identities=46% Similarity=0.884 Sum_probs=511.0
Q ss_pred CeehhHHHHHHHHHhhccccccchhhhhhhHHHHHHHHHHHhhHHhhcccCcceeeecChHHHHHHHHhcCccceeeccc
Q 007708 1 MVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAG 80 (592)
Q Consensus 1 ~vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~vWf~~i~~~Giyni~~~~p~Vl~A~nP~y~i~f~~~~~~~g~~~LG~ 80 (592)
+||||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+||+|+++||++||++||.+|||
T Consensus 213 ~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgPIm~~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LG~ 292 (779)
T PLN00150 213 LVTIISCVILVILFSLQRFGTHKVSFLFAPIFLCWFFSLALIGCYNIIKWDKSVFLAFNPLYIVSFFIRNGRQGWESLGG 292 (779)
T ss_pred eehhhHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHHHHHHHHhcCHHHHhhcCHHHHHHHHHhCCCceEEEecc
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccchhhhhhccCCCCccceeeehhhhhhhHHHHhhcccchhhccccccccCcccccccCcchHHHHHHHHHHHHHh
Q 007708 81 LFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVA 160 (592)
Q Consensus 81 v~L~iTG~EALyADlGHFg~~~I~~aw~~~V~P~L~L~Y~GQ~A~ll~~p~~~~npFf~~~P~~~~~P~~vlAtlAaIIA 160 (592)
|+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++||+|||||
T Consensus 293 V~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~LlL~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIA 372 (779)
T PLN00150 293 IVLCMTGTEAMFADLGHFTVKSMQIAFTSLVYPCLLLTYLGQAAYLVKHMEDVNDPFYRSLPKPIYWPIFVLATCSAMIA 372 (779)
T ss_pred eeeeecchhhhhccccCCCccceeeeehhhHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhHHHHHHcCCCCcceEEecCCccCCcccchhhHHHHHHHhhheeEEecCchhHHHhhhhhhhhHHHHHHH
Q 007708 161 SQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTL 240 (592)
Q Consensus 161 SQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiaV~~~m~iTT~ 240 (592)
|||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||||||+||++||++||+
T Consensus 373 SQA~ISg~FSi~~Qai~Lg~fPrvkI~hTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~ 452 (779)
T PLN00150 373 SQAMISATFSIVKQAMALGCFPRVKIVHTSNKVHGQVYIPEINWILMVLCLVITAGFRDTDEIGNAYGIAVVGVMIITTC 452 (779)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHHHHHHHHHHHHhheEEecChHHHHHHhhhheehhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhccccCCchHHHHHHHHHHHHHHHHHHhHHHHHhhhhcCCCChHH
Q 007708 241 LTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKW 320 (592)
Q Consensus 241 L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~K~~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~ 320 (592)
|+++||+.+||||++++++|+++|+++|++|||||+.||+||||+|+++|++++++|++||||++++++++.+|++|+++
T Consensus 453 L~~~v~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~ 532 (779)
T PLN00150 453 LMTLVMIIIWRKHILLALLFFTVFAIIEGIYFSAVLFKVTQGGWVPLVIAAVFGTVMYTWHYGTRKRYLYEMQHKVSVGW 532 (779)
T ss_pred HHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCccCCcEEEEeCCCCCchhhHHhhhhhCcccceEEEEEEEEEeeccccCCCceEEEEeecCCCCcEEEEE
Q 007708 321 ILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCI 400 (592)
Q Consensus 321 ~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhe~~vfv~i~~~~vP~V~~~eR~~v~~l~~~~~~~yR~v 400 (592)
+.++.++.++.||||+|+|||++++|+|++|.||++|||++||++||+|||++|+|+||++|||+++++++++|++|||+
T Consensus 533 ~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~v~~~~~lhe~~Vfl~i~~~~vP~V~~~eR~~v~~i~~~~~r~~r~v 612 (779)
T PLN00150 533 LLGLGPSLGLVRVPGIGLMYTDLAHGVPPLFSHFITNLPAIHSTVVFVCIKYLPVNTVPQDERFLIRRIGPRAYSMYRCA 612 (779)
T ss_pred HHhhcccCCCcccCcEEEEEeCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEE
Confidence 99998888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeecccCCCchhhHHHHHHHHHHHHHhhhccCCCCCCCCCCcceeeecccccccccccccCCcccccCCCCCCccCCC
Q 007708 401 VRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKFGKRLARSESDSKEESCSSSFPITGSC 480 (592)
Q Consensus 401 vryGY~d~~~~~~~f~~~lv~~L~eFI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 480 (592)
+||||||..++++|||++|+++|++|||+|+...+ .+ ++++++..+++.... +.+ +.. .. . .++
T Consensus 613 vryGy~d~~~d~~dFE~~LvesL~~FIr~e~~~~~-~~---~~~~~~~~~~~~~~~-----~~~--~~~-~~---~-~~~ 676 (779)
T PLN00150 613 ARYGYTDLEKKDDNFEQLLIASLERFIEIESFREQ-SD---LESMAASWTPEELMG-----EGN--SVG-SG---L-FTQ 676 (779)
T ss_pred EEEccCcCcccchHHHHHHHHHHHHHHHhhhhccc-cc---ccccccccccccccc-----cCC--ccc-cc---c-ccc
Confidence 99999999998899999999999999999874311 11 112222211100000 000 000 00 0 000
Q ss_pred CCCchhhhhhcccccCCCCCCCCCcccccccCccccchhHHHHHHHHHHHHhcCcEEEeeecEEEecCCCChhHHHHHHH
Q 007708 481 SKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINV 560 (592)
Q Consensus 481 ~~~~~~~~~~s~~~~~~~~~~~~~~v~f~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~v~ar~~Ss~lKk~vIn~ 560 (592)
.+....+.++..+.+.+ .++++++ .+.+++++||+++|++|||+||+||+||++|||||+|||+||++||+
T Consensus 677 -~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~v~Ak~~Ss~~KK~vIN~ 747 (779)
T PLN00150 677 -YDQSDINFATSQEWKRP---SSQEDSV-----SGHSSDTQDEVAFLNKCKEAGVVYILGNNDVKARKDSGFFKKVIINY 747 (779)
T ss_pred -ccccccccccccccccc---ccccccc-----ccccccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHH
Confidence 00000111111111111 1223343 22347899999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCcccccCCCCeEEeeeEEEC
Q 007708 561 AYSFLRKNSRSPAVFLNIPHICLIEVGINYYL 592 (592)
Q Consensus 561 ~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 592 (592)
+|+|||||||+|.++|+|||+|||||||+|||
T Consensus 748 ~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~V 779 (779)
T PLN00150 748 IYTFLRRISRDSEVVLNIPHECLLKVGMVYYV 779 (779)
T ss_pred HHHHHHHhccCCccccCCChHHeEEeceEEEC
Confidence 99999999999999999999999999999997
No 5
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=100.00 E-value=7.9e-174 Score=1439.88 Aligned_cols=521 Identities=42% Similarity=0.792 Sum_probs=493.9
Q ss_pred CeehhHHHHHHHHHhhccccccchhhhhhhHHHHHHHHHHHhhHHhhcccCcceeeecChHHHHHHHHhcCccceeeccc
Q 007708 1 MVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAG 80 (592)
Q Consensus 1 ~vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~vWf~~i~~~Giyni~~~~p~Vl~A~nP~y~i~f~~~~~~~g~~~LG~ 80 (592)
+|+||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+||+||++||.+||..||.+||+
T Consensus 167 ~Vv~it~~ILv~LF~iQ~~GT~kvg~~FgPim~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~~~~~~~~LG~ 246 (688)
T TIGR00794 167 WVVPISCIILVLLFLIQRFGTAKVGFTFAPIILVWLLLLAGIGIYNIVKFNPEVLKALSPYYAVQFFIEYGTVGWVSLGG 246 (688)
T ss_pred eehhHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHHHHhHhCHHHHHHHHHHCCCceeeeccc
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccchhhhhhccCCCCccceeeehhhhhhhHHHHhhcccchhhccccccccCcccccccCcchHHHHHHHHHHHHHh
Q 007708 81 LFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVA 160 (592)
Q Consensus 81 v~L~iTG~EALyADlGHFg~~~I~~aw~~~V~P~L~L~Y~GQ~A~ll~~p~~~~npFf~~~P~~~~~P~~vlAtlAaIIA 160 (592)
|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++||+|||||
T Consensus 247 V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~~vlAtlAtIIA 326 (688)
T TIGR00794 247 VVLSITGVEAMFADLGHFGKLPIQLAWFTFVYPSLILCYIGQAAYLSKHPEAIKNPFFLSIPDWALWPLFIIATLAAIIA 326 (688)
T ss_pred hhheeccHhhhhcccCCCCcccceeehHHHHHHHHHHHHcchHHHHhcCcchhcCcHHHhCchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhHHHHHHcCCCCcceEEecCCccCCcccchhhHHHHHHHhhheeEEecCchhHHHhhhhhhhhHHHHHHH
Q 007708 161 SQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTL 240 (592)
Q Consensus 161 SQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiaV~~~m~iTT~ 240 (592)
|||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||+|||+||++||+|||+
T Consensus 327 SQA~IsG~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYiP~vNw~Lmv~~i~vvl~F~~S~~la~AYGiaVt~tM~iTT~ 406 (688)
T TIGR00794 327 SQAVISGVFSITSQAVRLGCFPRVKIIHTSEKYHGQIYIPFVNWLLMLGVIAVTAGFRDTNNLGAAYGIAVTGTFLVTTC 406 (688)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHheeEEecChHHHHHHhhhhhhhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhccccCCchHHHHHHHHHHHHHHHHHHhHHHHHhhhhcCCCChHH
Q 007708 241 LTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKW 320 (592)
Q Consensus 241 L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~K~~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~ 320 (592)
|++++|+.+||||++++++|+++|+.+|+.||+||+.|++||||+|+++|++++++|++|+||++++++++.++++|+++
T Consensus 407 L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~ 486 (688)
T TIGR00794 407 LMTVVMTIVWKWNIYFVALFLLVFLSVELIYFSSNLDKVPEGGWFPLSLSGIFMSVMTTWRYGRFRKLRRDHEHRVSISA 486 (688)
T ss_pred HHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHH-hccCCCCCccCCcEEEEeCCCCCchhhHHhhhhhCcccceEEEEEEEEEeeccccCCCceEEEEeecCCCCcEEEE
Q 007708 321 ILA-QGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRC 399 (592)
Q Consensus 321 ~~~-~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhe~~vfv~i~~~~vP~V~~~eR~~v~~l~~~~~~~yR~ 399 (592)
+++ +.++.+++|+||+|+|||++++++|+++.|+++|||++||++||+||+++|+|+||++|||+++++++++ |+|||
T Consensus 487 ~~~~l~~~~~l~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~~vfltv~~~~~P~Vp~~eR~~v~~l~~~~-g~~rv 565 (688)
T TIGR00794 487 LIASLQPKPGLVRVPGIGIYYSNLVNGIPAVFGHLVTKFPSIHEVFIFLSLRTLDAPTVHNEERVQISQVGPTE-GMYRC 565 (688)
T ss_pred HHHHHhhcCCCcccCCeEEEeeCCccCCCHHHHHHHHhCCccceEEEEEEEEECCCCcCCcceEEEEEEEcCCC-CEEEE
Confidence 987 4444445899999999999999999999999999999999999999999999999999999999999754 89999
Q ss_pred EEEeeecccCCCchhhHHHHHHHHHHHHHhhhccCCCCCCCCCCcceeeecccccccccccccCCcccccCCCCCCccCC
Q 007708 400 IVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKFGKRLARSESDSKEESCSSSFPITGS 479 (592)
Q Consensus 400 vvryGY~d~~~~~~~f~~~lv~~L~eFI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 479 (592)
++||||||+++.+++|+++++++|++||+++... +.. + +. . .
T Consensus 566 ~~~yGf~e~~~~~~~l~~~ii~~L~~fi~~~~~~--~~~-------------------------~---~~-~----~--- 607 (688)
T TIGR00794 566 VIRYGFMDTPNEPKELAAHIVNSIVEFVEHECGF--NLN-------------------------N---LE-E----L--- 607 (688)
T ss_pred EEEecCCcCCCcHHHHHHHHHHHHHHHHHHHhhh--ccc-------------------------c---cc-c----c---
Confidence 9999999999999999999999999999876421 000 0 00 0 0
Q ss_pred CCCCchhhhhhcccccCCCCCCCCCcccccccCccccchhHHHHHHHHHHHHhcCcEEEeeecEEEecCCCChhHHHHHH
Q 007708 480 CSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVIN 559 (592)
Q Consensus 480 ~~~~~~~~~~~s~~~~~~~~~~~~~~v~f~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~v~ar~~Ss~lKk~vIn 559 (592)
+ + + ++ +.+.+||++++++++|+||+|++||++++++++|+++||..||
T Consensus 608 ---~----------~---~--------~~--------~~~~eee~~~~~~~~~~gv~yflg~~~~~~~~~~~~~~~~~I~ 655 (688)
T TIGR00794 608 ---S----------D---K--------RC--------RMPIEEIFENAMETKEHGYSYFMGEESLILKKRSPILRKIRVN 655 (688)
T ss_pred ---c----------c---c--------cc--------ccchHHHHHHHHHHhhcCCEEEeeceEEEECCCccHHHHHHHH
Confidence 0 0 0 00 0125789999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcccccCCCCeEEeeeEEEC
Q 007708 560 VAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL 592 (592)
Q Consensus 560 ~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 592 (592)
++|.|||||||++...++|||+|++||||.||+
T Consensus 656 ~lf~~l~rn~~~~~~~~~iP~~rvvevG~~~~i 688 (688)
T TIGR00794 656 HVFLFIRRNARRAPKVLEIPPDRLLEVGTVVEI 688 (688)
T ss_pred HHHHHHHHhccChhhheeCChhhEEEEeeEEEC
Confidence 999999999999999999999999999999996
No 6
>PRK10745 trkD potassium transport protein Kup; Provisional
Probab=100.00 E-value=1.4e-157 Score=1293.32 Aligned_cols=478 Identities=29% Similarity=0.513 Sum_probs=453.4
Q ss_pred CeehhHHHHHHHHHhhccccccchhhhhhhHHHHHHHHHHHhhHHhhcccCcceeeecChHHHHHHHHhcCccceeeccc
Q 007708 1 MVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAG 80 (592)
Q Consensus 1 ~vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~vWf~~i~~~Giyni~~~~p~Vl~A~nP~y~i~f~~~~~~~g~~~LG~ 80 (592)
+|+||||+||++||++||+||+|||++|||||++||++||++|+|||++ ||+||+|+||+|+++||.+||..||.+||+
T Consensus 142 ~Vvpit~~ILv~LF~iQ~~GT~~vG~~FgPIm~vWF~~i~~~Gi~~I~~-~P~Vl~AlnP~ya~~f~~~~~~~gf~~LG~ 220 (622)
T PRK10745 142 YIVPLSIIVLTLLFMIQKHGTGMVGKLFAPIMLTWFLTLAVLGLRSIIA-NPEVLHALNPMWAVHFFLEYKTVSFFALGA 220 (622)
T ss_pred ccHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHhc-CHHHHhHhCHHHHHHHHHhCCCceEEEecc
Confidence 4899999999999999999999999999999999999999999999998 899999999999999999999999999999
Q ss_pred eeeeccchhhhhhccCCCCccceeeehhhhhhhHHHHhhcccchhhccccccccCcccccccCcchHHHHHHHHHHHHHh
Q 007708 81 LFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVA 160 (592)
Q Consensus 81 v~L~iTG~EALyADlGHFg~~~I~~aw~~~V~P~L~L~Y~GQ~A~ll~~p~~~~npFf~~~P~~~~~P~~vlAtlAaIIA 160 (592)
|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++||+|||||
T Consensus 221 V~L~vTGaEALYADmGHFG~~~Ir~aW~~~v~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~viLATlAtIIA 300 (622)
T PRK10745 221 VVLAITGVEALYADMGHFGKFPIRLAWFTVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLILATLATVIA 300 (622)
T ss_pred eeeeccchHHHhhccCCCCccceeeeehhhHHHHHHHHhcchHHHHhcCchhhcCcHHHhCChhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhHHHHHHcCCCCcceEEecCCccCCcccchhhHHHHHHHhhheeEEecCchhHHHhhhhhhhhHHHHHHH
Q 007708 161 SQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTL 240 (592)
Q Consensus 161 SQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiaV~~~m~iTT~ 240 (592)
|||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|++++++||||++||+|||+||++||++||+
T Consensus 301 SQAvISGaFSl~~QAi~Lg~~Prl~I~hTS~~~~GQIYIP~vNw~Lmv~~i~~vl~F~sS~~La~AYGiAVt~tM~iTT~ 380 (622)
T PRK10745 301 SQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPFVNWLLYVAVVIVIVSFEHSSNLAAAYGIAVTGTMVLTSI 380 (622)
T ss_pred HHHHHHhHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHeeEEEecCchHHHHHhhhhheeHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhccccCCchHHHHHHHHHHHHHHHHHHhHHHHHhhhhcCCCChHH
Q 007708 241 LTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKW 320 (592)
Q Consensus 241 L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~K~~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~ 320 (592)
|++++++.+|||+++++++++++|+.+|+.||+||+.|++||||+|+++|++++++|++|++|++++++++.++++++++
T Consensus 381 L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~v~~~iM~tW~~G~~~~~~~~~~~~~~l~~ 460 (622)
T PRK10745 381 LSTTVARKNWHWNKYFVALILIAFLCIDIPLFSANLDKLLSGGWLPLSLGLVMFIVMTTWKSERFRLLRRMHEHGNSLEA 460 (622)
T ss_pred HHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCccCCcEEEEeCCCCCchhhHHhhhhhCcccceEEEEEEEEEeeccccCCCceEEEEeecCCCCcEEEEE
Q 007708 321 ILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCI 400 (592)
Q Consensus 321 ~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhe~~vfv~i~~~~vP~V~~~eR~~v~~l~~~~~~~yR~v 400 (592)
+++..++.++.|+||+|+|+|+.++++|+++.|++||||++||++||+||+++|+|+||++||++++++++ ++|||+
T Consensus 461 f~~~l~~~~~~rvpG~avflt~~~~~vP~~l~h~lk~~~~lhe~~v~l~v~~~~~P~V~~~eR~~v~~l~~---g~~rv~ 537 (622)
T PRK10745 461 MIASLEKSPPVRVPGTAVYMSRAINVIPFALLHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLSP---TFWRVV 537 (622)
T ss_pred HHHHhhhcCCCccCeEEEEEeCCCCCCCHHHHHHhhcCCccceEEEEEEEEECCCcccCcccEEEEEEECC---CEEEEE
Confidence 99888777778999999999999999999999999999999999999999999999999999999999996 699999
Q ss_pred EEeeecccCCCchhhHHHHHHHHHHHHHhhhccCCCCCCCCCCcceeeecccccccccccccCCcccccCCCCCCccCCC
Q 007708 401 VRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKFGKRLARSESDSKEESCSSSFPITGSC 480 (592)
Q Consensus 401 vryGY~d~~~~~~~f~~~lv~~L~eFI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 480 (592)
+||||||+||.++.+++ .+.+ + .
T Consensus 538 ~~yGf~e~~~i~~~L~~---------~~~~--------------------------g------------------~---- 560 (622)
T PRK10745 538 ASYGWRETPNVEEVFHR---------CGLE--------------------------G------------------L---- 560 (622)
T ss_pred EEecCCCCCCHHHHHHH---------HHhC--------------------------C------------------C----
Confidence 99999999877542221 0000 0 0
Q ss_pred CCCchhhhhhcccccCCCCCCCCCcccccccCccccchhHHHHHHHHHHHHhcCcEEEeeecEEEecCCCC---hhHHHH
Q 007708 481 SKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAP---FLKRFV 557 (592)
Q Consensus 481 ~~~~~~~~~~s~~~~~~~~~~~~~~v~f~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~v~ar~~Ss---~lKk~v 557 (592)
+++ -..++|.+||+.+...++++ |-||
T Consensus 561 --------------------------~~~----------------------~~~~s~fl~r~~l~~~~~~~m~~wr~~-- 590 (622)
T PRK10745 561 --------------------------SCR----------------------MMETSFFMSHESLILGKRPWYLRLRGK-- 590 (622)
T ss_pred --------------------------CCC----------------------ccceEEEEeeEEEEeCCCCCcHHHHHH--
Confidence 000 01578999999999888877 6666
Q ss_pred HHHHHHHHHhhcCCCCcccccCCCCeEEeeeEEEC
Q 007708 558 INVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL 592 (592)
Q Consensus 558 In~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 592 (592)
.|.||.||++++...+++|++|++|+|+-+|+
T Consensus 591 ---lF~~m~rna~~~~~~f~lP~~rvvelG~~v~i 622 (622)
T PRK10745 591 ---LFLLLQRNALRAPDQFEIPPNRVIELGTQVEI 622 (622)
T ss_pred ---HHHHHHHcCCCHHHHhCCCcccEEEEeeEEeC
Confidence 68999999999999999999999999999885
No 7
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=100.00 E-value=1.8e-149 Score=1219.96 Aligned_cols=404 Identities=41% Similarity=0.796 Sum_probs=400.4
Q ss_pred CeehhHHHHHHHHHhhccccccchhhhhhhHHHHHHHHHHHhhHHhhcccCcceeeecChHHHHHHHHhcCccceeeccc
Q 007708 1 MVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAG 80 (592)
Q Consensus 1 ~vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~vWf~~i~~~Giyni~~~~p~Vl~A~nP~y~i~f~~~~~~~g~~~LG~ 80 (592)
+|+||||+||++||++||+||+|||++|||||++||++||++|+|||++ ||+||+|+||+|+++||.+||+.||.+||+
T Consensus 131 ~Vv~it~~ILv~LF~iQ~~GT~~ig~~FgPim~~WF~~l~~~G~~~I~~-~p~Vl~A~nP~yai~f~~~~~~~~~~~LG~ 209 (534)
T PF02705_consen 131 YVVPITIAILVGLFAIQRFGTAKIGKLFGPIMLLWFLTLGVLGLYNIIQ-HPEVLKALNPYYAIRFFIRNGWIGFFVLGA 209 (534)
T ss_pred eehhHHHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHHHHhh-CHHHHHHhCHHHHHHHHHHcCCchhhhcch
Confidence 4899999999999999999999999999999999999999999999999 599999999999999999999999999999
Q ss_pred eeeeccchhhhhhccCCCCccceeeehhhhhhhHHHHhhcccchhhccccccccCcccccccCcchHHHHHHHHHHHHHh
Q 007708 81 LFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVA 160 (592)
Q Consensus 81 v~L~iTG~EALyADlGHFg~~~I~~aw~~~V~P~L~L~Y~GQ~A~ll~~p~~~~npFf~~~P~~~~~P~~vlAtlAaIIA 160 (592)
|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++||+|||||
T Consensus 210 V~L~~TGaEALyADmGHfg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~ilAtlAtIIA 289 (534)
T PF02705_consen 210 VFLCVTGAEALYADMGHFGRKPIRIAWFFLVFPALLLNYFGQGALLLSHPEAVSNPFFLLIPEWLLWPMVILATLATIIA 289 (534)
T ss_pred HHHHHhhHHHHHhhhccccchhhhhhHHHHHHHHHHHHHccHHHHHHcCcchhhhHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhHHHHHHcCCCCcceEEecCCccCCcccchhhHHHHHHHhhheeEEecCchhHHHhhhhhhhhHHHHHHH
Q 007708 161 SQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTL 240 (592)
Q Consensus 161 SQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiaV~~~m~iTT~ 240 (592)
|||+|||+||+++||++||||||+||+|||++.+||||||+|||+||++|++++++||||++||+|||+||++||++||+
T Consensus 290 SQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~L~i~~i~vvl~F~~S~~la~AYGiAVt~tM~iTT~ 369 (534)
T PF02705_consen 290 SQAVISGAFSLTRQAIQLGYFPRLKIVHTSEKEEGQIYIPEVNWLLMIGVIAVVLGFRSSSNLAAAYGIAVTGTMLITTI 369 (534)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEECCcccCCcEechHHHHHHHHHHHhhheEECChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhccccCCchHHHHHHHHHHHHHHHHHHhHHHHHhhhhcCCCChHH
Q 007708 241 LTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKW 320 (592)
Q Consensus 241 L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~K~~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~ 320 (592)
|++++++.+|||+++++++++++|+.+|+.||+||+.|++||||+|+++|++++++|++|+||+++++++++++++++++
T Consensus 370 L~~~v~~~~w~~~~~~~~~~~~~fl~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~~~~~~~~~~ 449 (534)
T PF02705_consen 370 LLFLVMRRVWKWPLWLALLFFLFFLVIDLLFFSANLLKFPHGGWFPLLIAAVLFTIMYTWRRGRKLLYEFERENKLPLDD 449 (534)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCccCCcEEEEeCCCCCchhhHHhhhhhCcccceEEEEEEEEEeeccccCCCceEEEEeecCCCCcEEEEE
Q 007708 321 ILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCI 400 (592)
Q Consensus 321 ~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhe~~vfv~i~~~~vP~V~~~eR~~v~~l~~~~~~~yR~v 400 (592)
+.++.++.++.|+||+|+|+|+..+++|+++.|+++||+++||+++|++++++|+|+||++|||+++++++ +++|||+
T Consensus 450 ~~~~~~~~~~~rvpG~aVFlt~~~~~vP~~l~h~l~~~~vlhe~~v~l~v~~~~vP~V~~~~R~~v~~l~~--~g~~rv~ 527 (534)
T PF02705_consen 450 FLELLEDQSIPRVPGTAVFLTRSPDGVPPALLHNLKHNKVLHERVVFLTVKTEPVPRVPPEERYEVERLGP--DGFYRVT 527 (534)
T ss_pred HHHhhhhCCCceecceEEEEcCCCccCcHHHHHHHHhCCcccceEEEEEEEEeccCCCCCceEEEEEEecC--CCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999996 2899999
Q ss_pred EEeeecc
Q 007708 401 VRNGYKD 407 (592)
Q Consensus 401 vryGY~d 407 (592)
+||||||
T Consensus 528 ~ryGf~e 534 (534)
T PF02705_consen 528 LRYGFME 534 (534)
T ss_pred EEecCCC
Confidence 9999998
No 8
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-144 Score=1163.07 Aligned_cols=480 Identities=30% Similarity=0.593 Sum_probs=454.0
Q ss_pred CeehhHHHHHHHHHhhccccccchhhhhhhHHHHHHHHHHHhhHHhhcccCcceeeecChHHHHHHHHhcCccceeeccc
Q 007708 1 MVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAG 80 (592)
Q Consensus 1 ~vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~vWf~~i~~~Giyni~~~~p~Vl~A~nP~y~i~f~~~~~~~g~~~LG~ 80 (592)
+|+|||++||++||++||+||++||++|||||++||+++|..|++||.+ ||+||+|+|||||++|+.++|..||++||+
T Consensus 147 ~Vvpitl~IL~~LF~iQ~~GT~~Vg~~FGPVm~lWF~~l~~~Gl~~i~~-~p~IL~AiNP~yAi~fl~~~~~~gf~vLGa 225 (627)
T COG3158 147 YVVPITLIILVLLFLIQRFGTGRVGKLFGPVMLLWFLALAVLGLINIID-DPEILRAINPYYAVHFLLEEGFVGFFVLGA 225 (627)
T ss_pred ccHHHHHHHHHHHHHHhcccchhhhhhhccHHHHHHHHHHHHHHHHHhc-CHHHHHHhChHHHHHHHHhCCceEEEEeee
Confidence 5899999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred eeeeccchhhhhhccCCCCccceeeehhhhhhhHHHHhhcccchhhccccccccCcccccccCcchHHHHHHHHHHHHHh
Q 007708 81 LFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVA 160 (592)
Q Consensus 81 v~L~iTG~EALyADlGHFg~~~I~~aw~~~V~P~L~L~Y~GQ~A~ll~~p~~~~npFf~~~P~~~~~P~~vlAtlAaIIA 160 (592)
||||+||+||||||||||||+|||.||+++|+|||+|||+||||++++||++..||||.++|+|++||+++|||+|||||
T Consensus 226 VfLavTGaEALYADmGHfGr~pI~~AWf~vv~P~L~LNY~GQGA~vL~~p~a~~npFF~~~P~~aliP~viLAT~ATVIA 305 (627)
T COG3158 226 VFLAVTGAEALYADMGHFGRKPIRVAWFFVVLPCLLLNYFGQGALLLSNPEAIGNPFFLLAPDWALIPLVILATAATVIA 305 (627)
T ss_pred eeeeeccHHHHHhhccccCCccHHHHHHHHHHHHHHHHHccccceeccCcccccCcHHHhChhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhHHHHHHcCCCCcceEEecCCccCCcccchhhHHHHHHHhhheeEEecCchhHHHhhhhhhhhHHHHHHH
Q 007708 161 SQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTL 240 (592)
Q Consensus 161 SQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiaV~~~m~iTT~ 240 (592)
|||+|||+||++|||++||++||+||.|||+++.||||||.|||+|+++++.++++||+|++||+|||+|||++|+|||+
T Consensus 306 SQAvISGaFSLtrQAi~Lg~lPrm~I~~TSe~~~GQIYiP~VN~~L~~~V~~~vl~F~~S~~LAaAYGiAVTgtM~iTt~ 385 (627)
T COG3158 306 SQAVISGAFSLTRQAIRLGYLPRMRIRHTSETESGQIYIPAVNWLLLVAVVFVVLGFGSSSNLAAAYGIAVTGTMVITTI 385 (627)
T ss_pred HHHHHhhHhHHHHHHHHhCCCCceEEEecCCcccceEEehHHHHHHHHHHhheeeEecChHHHHHhhChheeehhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhccccCCchHHHHHHHHHHHHHHHHHHhHHHHHhhhhcCCCChHH
Q 007708 241 LTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKW 320 (592)
Q Consensus 241 L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~K~~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~ 320 (592)
|++.+++..|||+.+++.++.++|+.+|..||+||+.|++||||+|+++|++++++|+||++|+++.+++..++++|+|.
T Consensus 386 L~~~~~~~~w~w~~~~~~~~~~~f~~id~~Ff~AN~~Ki~~GGw~pllia~~i~~vM~tW~~g~~~l~~~~~~~~i~l~~ 465 (627)
T COG3158 386 LLTVVMRKKWKWRKWLVALILIVFLAIDILFFAANLLKIHDGGWLPLLLAAVIFFVMWTWKRGRQILFEKTRENGIPLDA 465 (627)
T ss_pred HHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhhhhhHHHHHHhhcCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCccCCcEEEEeCCCCCchhhHHhhhhhCcccceEEEEEEEEEeeccccCCCceEEEEeecCCCCcEEEEE
Q 007708 321 ILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCI 400 (592)
Q Consensus 321 ~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhe~~vfv~i~~~~vP~V~~~eR~~v~~l~~~~~~~yR~v 400 (592)
+++.+++.++.|||||++|+|+..+.+|.++.|++|||+++||++||+++++.|+|+|+++||++++++++ +++|++
T Consensus 466 fi~~l~~~~p~~v~gTAVfLt~~~~~vP~aLlhnlkhnkvlhe~nv~ltv~t~~~P~v~~~~r~~ve~l~~---~f~rV~ 542 (627)
T COG3158 466 FIASLEKHPPVRVPGTAVFLTRDPDVVPRALLHNLKHNKVLHERNVFLTVRTEDVPYVHPTDRVKVEQLSD---DFVRVV 542 (627)
T ss_pred HHHHHhhCCCcccCceEEEEcCCCCcCcHHHHHHhhhhheeeeeEEEEEEEecCCCCCCccceeeeeeccC---ceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998 599999
Q ss_pred EEeeecccCCCchhhHHHHHHHHHHHHHhhhccCCCCCCCCCCcceeeecccccccccccccCCcccccCCCCCCccCCC
Q 007708 401 VRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKFGKRLARSESDSKEESCSSSFPITGSC 480 (592)
Q Consensus 401 vryGY~d~~~~~~~f~~~lv~~L~eFI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 480 (592)
++|||||+||.++ ..+.... ++
T Consensus 543 l~~Gfme~pnvp~------------~l~~~~~-----------------------~G----------------------- 564 (627)
T COG3158 543 LHFGFMETPNVPR------------ALRLCRK-----------------------KG----------------------- 564 (627)
T ss_pred EEeeccCCCCHHH------------HHHHHhh-----------------------cC-----------------------
Confidence 9999999998864 1211100 00
Q ss_pred CCCchhhhhhcccccCCCCCCCCCcccccccCccccchhHHHHHHHHHHHHhcCcEEEeeecEEEecCCCChhHHHHHHH
Q 007708 481 SKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINV 560 (592)
Q Consensus 481 ~~~~~~~~~~s~~~~~~~~~~~~~~v~f~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~v~ar~~Ss~lKk~vIn~ 560 (592)
.+|+. -...|.+|++.++++++|++-+- -+-
T Consensus 565 -------------------------~~f~i----------------------m~tsFfl~re~l~~~~~~g~~~w--~~~ 595 (627)
T COG3158 565 -------------------------LKFDI----------------------METSFFLSRESLIASKNSGMPRW--RDR 595 (627)
T ss_pred -------------------------ceecc----------------------cceEEEEEeeeeecCCCCCchHH--HHH
Confidence 00100 02468999999999999988653 245
Q ss_pred HHHHHHhhcCCCCcccccCCCCeEEeeeEEE
Q 007708 561 AYSFLRKNSRSPAVFLNIPHICLIEVGINYY 591 (592)
Q Consensus 561 ~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~ 591 (592)
.|..|.||.-++...++||.+|++|+|---|
T Consensus 596 lfi~l~r~aa~~~~~F~lp~~rvvElGtqve 626 (627)
T COG3158 596 LFIALARNAASPTDYFKLPPNRVVELGTQVE 626 (627)
T ss_pred HHHHHHHhcCCHHHhhCCCCCcEEEeeeeee
Confidence 7899999999999999999999999995444
No 9
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=92.57 E-value=0.44 Score=52.99 Aligned_cols=85 Identities=15% Similarity=0.098 Sum_probs=41.5
Q ss_pred hhHHHHHHHHHhhccccccchhhh---hhhHHHHHHHHHHHhhHHhhcccCcceeeecChHHHHHHHHhcCcccee-ecc
Q 007708 4 FLACLVLIGHFVLQYRGTHRVAFM---FAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWT-SLA 79 (592)
Q Consensus 4 ~is~~ILv~LF~~Q~~GT~kvg~~---F~Pim~vWf~~i~~~Giyni~~~~p~Vl~A~nP~y~i~f~~~~~~~g~~-~LG 79 (592)
.+++++++++..+.-+|....+++ +.-+.++=++.+.+.|++.+.+-++. ..+|...+.-. .++..+|. .+.
T Consensus 167 ~i~~~~i~~~~~ln~~Gvk~~~~~~~i~~~~~l~~l~~~ii~~~~~~~~~~~~---~~~~~~~f~~~-~~~~~~~~~a~~ 242 (501)
T TIGR00911 167 LVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVE---SLNPKNAFEGT-ETSAGGIVLAFY 242 (501)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc---ccCcccccCCC-CCcHHHHHHHHH
Confidence 356677778888999996655543 33333322233444555544331111 11222111000 01223343 466
Q ss_pred ceeeeccchhhhh
Q 007708 80 GLFLCTTGSEAMF 92 (592)
Q Consensus 80 ~v~L~iTG~EALy 92 (592)
.++.+.+|-|+.=
T Consensus 243 ~~~~af~G~e~~~ 255 (501)
T TIGR00911 243 SGIWAYGGWNYLN 255 (501)
T ss_pred HHHHHHHhHHHHh
Confidence 6778888888643
No 10
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]
Probab=84.15 E-value=13 Score=40.21 Aligned_cols=174 Identities=16% Similarity=0.124 Sum_probs=97.6
Q ss_pred ehhHHHHHHHHHhhccccccchhhhhhhHHHHHHHHHHHhhHHhhcccCcceeeecChHHHHHHHHhcCc---cceeecc
Q 007708 3 VFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGR---DGWTSLA 79 (592)
Q Consensus 3 v~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~vWf~~i~~~Giyni~~~~p~Vl~A~nP~y~i~f~~~~~~---~g~~~LG 79 (592)
..++.+++++++.++-+|....++...-..++=++.+.++++..+..++......+++... ++. .-...++
T Consensus 135 ~~~~~~~~~~~~~ln~~G~~~~~~~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 208 (466)
T COG0531 135 ILIALALIALLTLLNLRGIKASAKINSIITILKIIILLIFIILGLFAFGFSNGNLFAPFNP------GGGSFGGILAAIL 208 (466)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCCCccc------ccchHHHHHHHHH
Confidence 4678889999999999999888877666555555555555555555433322222221111 110 1233556
Q ss_pred ceeeeccchhhh--hh-ccCCCCccceeeehhhhhhhHHHHhhcccchhhccccc-ccc-----Cccc---cccc-Ccch
Q 007708 80 GLFLCTTGSEAM--FA-DLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFS-AAP-----LSFH---ASIP-DPLR 146 (592)
Q Consensus 80 ~v~L~iTG~EAL--yA-DlGHFg~~~I~~aw~~~V~P~L~L~Y~GQ~A~ll~~p~-~~~-----npFf---~~~P-~~~~ 146 (592)
.++.+.+|-|+. +| ++=+ .+|.|-.|-..-..-+.++-.+++-+....-|. +.. +|+. .... .+..
T Consensus 209 ~~~~~f~G~e~~~~~a~E~kn-p~r~ip~aii~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~ 287 (466)
T COG0531 209 LAFFAFTGFEAIATLAEEVKN-PKRTIPRAIILSLLIVLILYILGALVIVGVLPAGDLAASAPSAPLALAALFGGGNWGA 287 (466)
T ss_pred HHHHHhhcHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHHHhCccHHHHhccCCCccHHHHHHHcCccHHH
Confidence 678889998864 33 2333 555566555443333333333333333333332 111 4544 2233 3555
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHcCCCCc
Q 007708 147 WPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPR 183 (592)
Q Consensus 147 ~P~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr 183 (592)
+-+.+++.+++.-+..+.+.+.--+..+.-+-|++|+
T Consensus 288 ~~i~~~~~~~~~~~~~~~~~~~sR~~~~~ardg~lP~ 324 (466)
T COG0531 288 IIIAILALLSLFGSLLAWILAVSRVLYAMARDGLLPK 324 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccH
Confidence 5566666666666666666666667777777899998
No 11
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=82.88 E-value=35 Score=37.40 Aligned_cols=22 Identities=9% Similarity=0.057 Sum_probs=16.3
Q ss_pred HHHHHHHHHhhccccccchhhh
Q 007708 6 ACLVLIGHFVLQYRGTHRVAFM 27 (592)
Q Consensus 6 s~~ILv~LF~~Q~~GT~kvg~~ 27 (592)
+++++.++..+.-+|+...+.+
T Consensus 125 ~~~i~~~~~~ln~~gvk~~~~i 146 (435)
T PRK10435 125 CIAIVWVFTFVNMLGGTWVSRL 146 (435)
T ss_pred HHHHHHHHHHHHHHhHHHHHHH
Confidence 4456667788999998877765
No 12
>TIGR00909 2A0306 amino acid transporter.
Probab=82.65 E-value=22 Score=38.49 Aligned_cols=166 Identities=16% Similarity=0.109 Sum_probs=76.6
Q ss_pred HHHHHHHHHhhccccccchh---hhhhhHHHHHHHHHHHhhHHhhcccCcceeeecChHHHHHHHHhcCccce-eeccce
Q 007708 6 ACLVLIGHFVLQYRGTHRVA---FMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGW-TSLAGL 81 (592)
Q Consensus 6 s~~ILv~LF~~Q~~GT~kvg---~~F~Pim~vWf~~i~~~Giyni~~~~p~Vl~A~nP~y~i~f~~~~~~~g~-~~LG~v 81 (592)
+++++++...+..+|.+..+ ..++.+.++=++.+.+.|+.+. ++.-+..+.|. +..+| ..+...
T Consensus 137 ~i~~~~~~~~l~~~g~~~~~~~~~v~~~~~i~~l~~~~~~~~~~~---~~~~~~~~~~~---------~~~~~~~~~~~~ 204 (429)
T TIGR00909 137 ALLIVLFLTYILYLGAKESGKVNDILVVLKVAALLLFAALGAIHF---ASNNYTPFMPM---------GFGGVGAATALV 204 (429)
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhhHHHhhC---cHHhcCCCCCC---------cHHHHHHHHHHH
Confidence 45667777788888865544 5666665554444444555432 22222222221 11121 123345
Q ss_pred eeeccchhhhhh--ccCCCCccceeeehhhhhhhHHHHhhcccchhhccc-c-c---cccCccc----ccccCcchHHHH
Q 007708 82 FLCTTGSEAMFA--DLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKN-F-S---AAPLSFH----ASIPDPLRWPVL 150 (592)
Q Consensus 82 ~L~iTG~EALyA--DlGHFg~~~I~~aw~~~V~P~L~L~Y~GQ~A~ll~~-p-~---~~~npFf----~~~P~~~~~P~~ 150 (592)
+.+.+|-|+.-. +-=+-.+|.+..|-..-+.=+ .+.|+.-....... | + +.++|+. +...++.-+-+.
T Consensus 205 ~~af~G~e~~~~~~~E~~~p~r~ip~ai~~~~~~~-~v~Yil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (429)
T TIGR00909 205 FFAFIGFEAISTAAEEVKNPERDIPKAIILSLIVV-TLLYVLVAAVILGAVPWRQLAGSTAPLSLVGYDLGQGIGGLILT 283 (429)
T ss_pred HHHHhhHHHHHhhHHhccCccccccHHHHHHHHHH-HHHHHHHHHHHhcCcCHHHhCCCCcHHHHHHHHhCchHHHHHHH
Confidence 566778776543 333445667776654322222 22244332222111 1 1 2223443 222233333344
Q ss_pred HHHHHHHHHhhhhhhhhhhhhHHHHHHcCCCCcc
Q 007708 151 VVATLAAIVASQSVISATFSTVKQCYALGCFPRV 184 (592)
Q Consensus 151 vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ 184 (592)
+.+.++..-+..+.+.+.==+....-+.|.+|+.
T Consensus 284 i~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~~ 317 (429)
T TIGR00909 284 AGAVFSIASVMLAGIYGTSRVLFAMSRDGLLPGS 317 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH
Confidence 4444444444444444443444444578999973
No 13
>PRK10655 potE putrescine transporter; Provisional
Probab=82.43 E-value=38 Score=36.94 Aligned_cols=41 Identities=20% Similarity=0.087 Sum_probs=23.3
Q ss_pred HHHHHHHHHhhccccccchhhh---hhhHHHHHHHHHHHhhHHh
Q 007708 6 ACLVLIGHFVLQYRGTHRVAFM---FAPVVILWLLSTTGIGIYN 46 (592)
Q Consensus 6 s~~ILv~LF~~Q~~GT~kvg~~---F~Pim~vWf~~i~~~Giyn 46 (592)
+.++++++..+.-+|++..+++ ..-..++-++.+.+.|++.
T Consensus 127 ~~~~l~~~~~ln~~g~~~~~~i~~i~~~~~l~~l~~~~i~~~~~ 170 (438)
T PRK10655 127 TIGVLWLCTVANFGGARITGQISSVTVWGVIIPVVGLSIIGWFW 170 (438)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455667778899997666654 3333334444444555443
No 14
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=81.86 E-value=34 Score=37.91 Aligned_cols=19 Identities=16% Similarity=0.214 Sum_probs=14.2
Q ss_pred chHHHHHHHHHHHHHHHHH
Q 007708 283 GWVALMFTTVFLAIMYVWH 301 (592)
Q Consensus 283 GW~pl~ia~i~~~iM~~W~ 301 (592)
-|.+++++++++....-|-
T Consensus 434 ny~~~~~~~~~~~~~~~~~ 452 (474)
T TIGR03813 434 RYVGLLIGLAALFVTAPFL 452 (474)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4788888888777766665
No 15
>TIGR00907 2A0304 amino acid permease (GABA permease).
Probab=78.33 E-value=18 Score=40.04 Aligned_cols=25 Identities=24% Similarity=0.627 Sum_probs=18.3
Q ss_pred chHHHHHHHHHHHHHHHHHHhHHHH
Q 007708 283 GWVALMFTTVFLAIMYVWHYGSRKR 307 (592)
Q Consensus 283 GW~pl~ia~i~~~iM~~W~~G~~~~ 307 (592)
-|.++++++++...+..|....++.
T Consensus 454 ny~~~~~~~~~~~~~~~~~~~~r~~ 478 (482)
T TIGR00907 454 NYAVVVFAGVLAISLVYWKYKGRKE 478 (482)
T ss_pred ChHhHHHHHHHHHHHHHheEeceee
Confidence 5999999888888888886543333
No 16
>PRK15049 L-asparagine permease; Provisional
Probab=75.23 E-value=1.1e+02 Score=34.32 Aligned_cols=22 Identities=18% Similarity=-0.019 Sum_probs=15.6
Q ss_pred hHHHHHHHHHhhccccccchhh
Q 007708 5 LACLVLIGHFVLQYRGTHRVAF 26 (592)
Q Consensus 5 is~~ILv~LF~~Q~~GT~kvg~ 26 (592)
++.++++++..+.-+|....+.
T Consensus 147 ~~~~~~~l~~~iN~~gvk~~~~ 168 (499)
T PRK15049 147 FALAALTIVGTMNMIGVKWFAE 168 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777778888888666554
No 17
>TIGR00930 2a30 K-Cl cotransporter.
Probab=72.88 E-value=42 Score=41.32 Aligned_cols=22 Identities=5% Similarity=0.108 Sum_probs=15.6
Q ss_pred hHHHHHHHHHhhccccccchhh
Q 007708 5 LACLVLIGHFVLQYRGTHRVAF 26 (592)
Q Consensus 5 is~~ILv~LF~~Q~~GT~kvg~ 26 (592)
++++++++++.+--+|....++
T Consensus 206 ia~i~l~ll~~In~~Gvk~~ak 227 (953)
T TIGR00930 206 YGTVTVVVLLGISFAGMEWENK 227 (953)
T ss_pred HHHHHHHHHHHHHHhhHHHHHH
Confidence 5667777788888888754443
No 18
>PRK11021 putative transporter; Provisional
Probab=72.30 E-value=1.2e+02 Score=32.96 Aligned_cols=26 Identities=23% Similarity=0.270 Sum_probs=19.4
Q ss_pred hhHHHHHHHHHhhccccccchhhhhh
Q 007708 4 FLACLVLIGHFVLQYRGTHRVAFMFA 29 (592)
Q Consensus 4 ~is~~ILv~LF~~Q~~GT~kvg~~F~ 29 (592)
++++++++++..+.-+|.+..+++-.
T Consensus 117 ~~~~~~~~~~~~ln~~Gv~~~~~~~~ 142 (410)
T PRK11021 117 LAELLTLALLWLLNLRGASSSANLQT 142 (410)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 45667778888899999888776543
No 19
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=68.01 E-value=1e+02 Score=34.07 Aligned_cols=44 Identities=7% Similarity=-0.201 Sum_probs=28.2
Q ss_pred ccCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHcCCCCcc
Q 007708 141 IPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRV 184 (592)
Q Consensus 141 ~P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ 184 (592)
..+|..+.+.+.+.++..-+..+.+.++=-+..+.-+-|.+|+.
T Consensus 274 ~g~~~~~~i~~~~~is~~~~~~~~~~~~sR~~~a~ardg~lP~~ 317 (468)
T TIGR03810 274 VGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKY 317 (468)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence 34555555555555555555566666666666677788999975
No 20
>TIGR00906 2A0303 cationic amino acid transport permease.
Probab=67.42 E-value=1.5e+02 Score=33.96 Aligned_cols=42 Identities=26% Similarity=0.299 Sum_probs=24.8
Q ss_pred hHHHHHHHHHhhccccccchhh---hhhhHHHHHHHHHHHhhHHh
Q 007708 5 LACLVLIGHFVLQYRGTHRVAF---MFAPVVILWLLSTTGIGIYN 46 (592)
Q Consensus 5 is~~ILv~LF~~Q~~GT~kvg~---~F~Pim~vWf~~i~~~Giyn 46 (592)
+++++++++..+--+|+...++ .+.-+.++-++.+.+.|+..
T Consensus 164 ~a~~ii~l~~~ln~~Gik~s~~v~~i~~~iki~~l~~~iv~g~~~ 208 (557)
T TIGR00906 164 FAVCLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFTK 208 (557)
T ss_pred HHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHhhhHHHhh
Confidence 4566666777788888766554 44444444444555556543
No 21
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A ....
Probab=62.96 E-value=60 Score=34.92 Aligned_cols=221 Identities=14% Similarity=0.114 Sum_probs=118.1
Q ss_pred hhHHHHHHHHHhhccccccchhhh---hhhHHH-HHHHHHHHhhHHhhcccCcce-----eeecChHHHHHHHHhcCccc
Q 007708 4 FLACLVLIGHFVLQYRGTHRVAFM---FAPVVI-LWLLSTTGIGIYNVIKWNPRV-----YQALSPYYIYKFFKYTGRDG 74 (592)
Q Consensus 4 ~is~~ILv~LF~~Q~~GT~kvg~~---F~Pim~-vWf~~i~~~Giyni~~~~p~V-----l~A~nP~y~i~f~~~~~~~g 74 (592)
.++.+++++.+.+.-+|....+++ .+=+.+ +-++.+.+.|++...+ +..- ....+|. +..+
T Consensus 120 ~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~i~~~l~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~ 189 (426)
T PF13520_consen 120 LIAIILILLFTLLNLLGIKLSGKIQNILTVIKIVIPLLVLIILGIVSFSF-SGFNSLSFSLSTFFPS---------GWPG 189 (426)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTC-CHHH----SHSCSSCS---------SSSH
T ss_pred eeeecccccceEeeechhhhhhhhhhhhhhhhhhhhhhhheeEEEeeecc-cccccccccccccCCc---------cccc
Confidence 456778888888888887766654 333333 3445556666665533 1110 0111111 1111
Q ss_pred -eeeccceeeeccchhhhhhccCCCCccceeeehhhhhhhHHHHhhcccchhhccccc----cccC------ccccc-cc
Q 007708 75 -WTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFS----AAPL------SFHAS-IP 142 (592)
Q Consensus 75 -~~~LG~v~L~iTG~EALyADlGHFg~~~I~~aw~~~V~P~L~L~Y~GQ~A~ll~~p~----~~~n------pFf~~-~P 142 (592)
+..++..+.+.+|-|+.=.-.+-.-+|.+..+=..-+.-+.++.-+..-++...-|. ..+| .+++. -.
T Consensus 190 ~~~~~~~~~~~~~G~e~~~~~~~E~k~k~ip~ai~~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (426)
T PF13520_consen 190 FLAGFSVAFFAFSGFEAIASLAEENKNKTIPRAIIISIIIVAIIYILFSIALLGALPDDELANSSNSPSPFAVLASAVGG 269 (426)
T ss_dssp HHHHHHHHGGGGTTTTHHHHGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTHCHHHTTTCHHCHHHHHHHHHHC
T ss_pred hhhHHHHHHhhcccccccccccccccchhheeecccchhHHHHHHhhhhheeeecccchhhhcccccccccchhhccccc
Confidence 445667788899999865555555456665554332222332222222333333221 1112 22222 24
Q ss_pred CcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHcCCCCcceEEecCCccCCcccchhhHHHHHHHhh-hee--EEe--
Q 007708 143 DPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSL-AVT--VGF-- 217 (592)
Q Consensus 143 ~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~i-~vv--~~F-- 217 (592)
++..+.+.+++.++..-+-.+.+.+.--++.+.-+-|.+|+. ..+++| +| .|..-.++...+- ++. ..|
T Consensus 270 ~~~~~~~~i~~~~~~~~~~~~~~~~~sR~l~~~a~d~~lP~~-~~~~~k--~~---~P~~a~~~~~~i~~i~~~~~~~~~ 343 (426)
T PF13520_consen 270 SWLAIIVSIAAILSLFGSINAFIFGASRLLYAMARDGVLPKW-FAKVNK--FG---TPYNAIILVAVISSILLLLFLFIP 343 (426)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSGG-GGTTSS--SS---SCHHHHHHHHHHHHHHHHHTTTSS
T ss_pred cccccccccccccccccccchhhcchhhcccccccccchhhh-hhhccc--cC---CceeeehhhhHHHHHHHHHHHhhh
Confidence 578888888888877777666666666677777788999942 222221 22 3555444433332 222 223
Q ss_pred -cCchhHHHhhhhhhhhHHHHHHH
Q 007708 218 -RDTNRLANAYGSACMALTFVSTL 240 (592)
Q Consensus 218 -~~s~~l~~AYGiaV~~~m~iTT~ 240 (592)
++.+.+.+.+.+......+++.+
T Consensus 344 ~~~~~~l~~~~~~~~~~~~~~~~~ 367 (426)
T PF13520_consen 344 QSSFDILVSLSSVGYLISYILVIL 367 (426)
T ss_dssp SSHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23456777777776666666633
No 22
>KOG3145 consensus Cystine transporter Cystinosin [Amino acid transport and metabolism]
Probab=62.96 E-value=13 Score=39.94 Aligned_cols=88 Identities=26% Similarity=0.563 Sum_probs=53.5
Q ss_pred HHHHHHHHHhhccccccchhh--hhhhHHHHHHHHHHHhhHH---------------------hhcccCcceeeecChHH
Q 007708 6 ACLVLIGHFVLQYRGTHRVAF--MFAPVVILWLLSTTGIGIY---------------------NVIKWNPRVYQALSPYY 62 (592)
Q Consensus 6 s~~ILv~LF~~Q~~GT~kvg~--~F~Pim~vWf~~i~~~Giy---------------------ni~~~~p~Vl~A~nP~y 62 (592)
+|+.+.=.|+-| +|-.++|+ +.|-+.+.|.++-...++- -++||-|..
T Consensus 213 t~Iti~Qc~~ye-R~~q~vs~~ialgil~i~~~f~~~~~~va~~~~~~wL~f~~~~syiKl~mTliKYiPQa-------- 283 (372)
T KOG3145|consen 213 TVITILQCFFYE-RGWQRVSKGIALGILAIFWLFAVVFMYVAYWYVIRWLAFLNNLSYIKLAMTLIKYIPQA-------- 283 (372)
T ss_pred HHHHHHHHHhhh-hcccccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHH--------
Confidence 444444444444 35566766 5666666665544433321 234443332
Q ss_pred HHHHHHhcCccceeeccceeeeccchhh-----------------hhhccCCCCcccee
Q 007708 63 IYKFFKYTGRDGWTSLAGLFLCTTGSEA-----------------MFADLGQFTAGSIK 104 (592)
Q Consensus 63 ~i~f~~~~~~~g~~~LG~v~L~iTG~EA-----------------LyADlGHFg~~~I~ 104 (592)
+.=+.|...+|| +.|+|+|=+|||-| .|+|+|-||-.=+.
T Consensus 284 -~mN~tRKSt~gw-sIgnIlLDfTGG~~slLQMilQ~~N~~sw~~f~gnp~KfGLg~vS 340 (372)
T KOG3145|consen 284 -YMNFTRKSTVGW-SIGNILLDFTGGTASLLQMILQSSNDNSWDTFYGNPGKFGLGLVS 340 (372)
T ss_pred -hhcceecccccc-ccccEEEEecccHHHHHHHHHHHhccccHHHHhcCchhhhhhhHH
Confidence 222456667888 78999999999975 68999999865443
No 23
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=62.23 E-value=62 Score=33.92 Aligned_cols=85 Identities=15% Similarity=0.234 Sum_probs=52.3
Q ss_pred hHHHhhhhhhhhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH----HHHHHHHHhhccccC-Cch---------HHH
Q 007708 222 RLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGS----IEIIYLSSACMKIPN-GGW---------VAL 287 (592)
Q Consensus 222 ~l~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~----ie~~f~sa~l~K~~~-GGW---------~pl 287 (592)
+-=..||.+|..+.++.++-++..+..+.+.+.+.++++.++++. +|-.-+|+ ..|-.. +.. +.+
T Consensus 13 ~k~~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss-~~~~~~~~~~~~~~~~R~~lAv 91 (301)
T PF14362_consen 13 NKYAGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSS-IRKSDGSRKRLLQALPRLLLAV 91 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhc-cccccchHHHHHHHHHHHHHHH
Confidence 344578999999999999999988888888886666666555554 45444443 333222 112 233
Q ss_pred HHHHHHHHHHHHHHHhHHHH
Q 007708 288 MFTTVFLAIMYVWHYGSRKR 307 (592)
Q Consensus 288 ~ia~i~~~iM~~W~~G~~~~ 307 (592)
++|.++...+..+-...++.
T Consensus 92 liaivIs~pl~l~iF~~eI~ 111 (301)
T PF14362_consen 92 LIAIVISEPLELKIFEKEID 111 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44444455555555555544
No 24
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=59.95 E-value=1.2e+02 Score=33.69 Aligned_cols=43 Identities=9% Similarity=-0.059 Sum_probs=23.4
Q ss_pred cCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHcCCCCcc
Q 007708 142 PDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRV 184 (592)
Q Consensus 142 P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ 184 (592)
.++...-+.+.+.+++.-+.-+.+.+.--+....-+-|.+|+.
T Consensus 279 g~~~~~~i~i~~~is~~~~~~~~~~~~sR~~~amardg~lP~~ 321 (473)
T TIGR00905 279 GKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGLFPKI 321 (473)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHH
Confidence 3443333333344444444455555555566666688999974
No 25
>PRK10249 phenylalanine transporter; Provisional
Probab=54.32 E-value=1.3e+02 Score=33.24 Aligned_cols=101 Identities=21% Similarity=0.204 Sum_probs=51.7
Q ss_pred HHHHHHHHHhhccccccchhh---hhhhHHHHHHHHHHHhhHHhhcccCcceeeecChHHHHHH--HHhcCccc-eeecc
Q 007708 6 ACLVLIGHFVLQYRGTHRVAF---MFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKF--FKYTGRDG-WTSLA 79 (592)
Q Consensus 6 s~~ILv~LF~~Q~~GT~kvg~---~F~Pim~vWf~~i~~~Giyni~~~~p~Vl~A~nP~y~i~f--~~~~~~~g-~~~LG 79 (592)
+.++++++..+.-+|....|. .++=+.++..+.+.++|+.-+...++.- ..++.+..+. +..+|..| +..+.
T Consensus 139 ~~~~~~l~~~lN~~gv~~~~~i~~~~~~ikv~~i~~~i~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~ 216 (458)
T PRK10249 139 AAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGE--KASIDNLWRYGGFFATGWNGLILSLA 216 (458)
T ss_pred HHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC--CCChhhccCCCCCCCCcHHHHHHHHH
Confidence 456666777788888766554 3333444555555556665443322210 1111110000 00122233 24455
Q ss_pred ceeeeccchhhh--hhccCCCCccceeeehh
Q 007708 80 GLFLCTTGSEAM--FADLGQFTAGSIKLAFC 108 (592)
Q Consensus 80 ~v~L~iTG~EAL--yADlGHFg~~~I~~aw~ 108 (592)
.++.+.+|-|+. .|+=-+-.+|+|-.|=.
T Consensus 217 ~~~~af~G~e~~~~~a~E~~~P~k~iPrai~ 247 (458)
T PRK10249 217 VIMFSFGGLELIGITAAEARDPEKSIPKAVN 247 (458)
T ss_pred HHHHHHcCHHHHHHHHHHhcCHhhHHHHHHH
Confidence 667788898865 66666667777665543
No 26
>PRK10644 arginine:agmatin antiporter; Provisional
Probab=53.95 E-value=2.3e+02 Score=31.00 Aligned_cols=22 Identities=18% Similarity=0.227 Sum_probs=14.6
Q ss_pred HHHHHHHHHhhccccccchhhh
Q 007708 6 ACLVLIGHFVLQYRGTHRVAFM 27 (592)
Q Consensus 6 s~~ILv~LF~~Q~~GT~kvg~~ 27 (592)
..++++++..+.-+|+...+++
T Consensus 129 ~~~~~~~~~~ln~~gvk~~~~i 150 (445)
T PRK10644 129 CVVVLWIFVLLNIVGPKMITRV 150 (445)
T ss_pred HHHHHHHHHHHHHhchHHHHHH
Confidence 4455566777888887666553
No 27
>COG4059 MtrE Tetrahydromethanopterin S-methyltransferase, subunit E [Coenzyme metabolism]
Probab=53.04 E-value=13 Score=38.28 Aligned_cols=39 Identities=21% Similarity=0.585 Sum_probs=31.5
Q ss_pred HHHHHhhcccc------CCchHHHHHHHHHHHHHHHHHHhHHHHH
Q 007708 270 IYLSSACMKIP------NGGWVALMFTTVFLAIMYVWHYGSRKRY 308 (592)
Q Consensus 270 ~f~sa~l~K~~------~GGW~pl~ia~i~~~iM~~W~~G~~~~~ 308 (592)
+|||+-..-+. +|||..++++.++..+...|++--+.+.
T Consensus 243 VFl~~W~~~~~d~~~~i~~G~isiv~Gliiv~iLii~N~kvEv~A 287 (304)
T COG4059 243 VFLSSWVTTVFDPAVSIQGGWISIVAGLIIVLILIIWNRKVEVKA 287 (304)
T ss_pred hhhhhhhhhhcCcccccccchhhhHHHHHHHHHHHHhcchhhhhh
Confidence 56666655555 8999999999999999999998665553
No 28
>TIGR00908 2A0305 ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily.
Probab=52.72 E-value=1e+02 Score=33.71 Aligned_cols=23 Identities=17% Similarity=0.119 Sum_probs=16.0
Q ss_pred hHHHHHHHHHhhccccccchhhh
Q 007708 5 LACLVLIGHFVLQYRGTHRVAFM 27 (592)
Q Consensus 5 is~~ILv~LF~~Q~~GT~kvg~~ 27 (592)
+++++++++..+.-+|++..+++
T Consensus 124 ~~~~~~~~~~~ln~~g~~~~~~i 146 (442)
T TIGR00908 124 AALVFYIVFIGINILGVGEAAKL 146 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhH
Confidence 44556666777888888777664
No 29
>PRK10746 putative transport protein YifK; Provisional
Probab=51.41 E-value=2.1e+02 Score=31.76 Aligned_cols=26 Identities=12% Similarity=0.013 Sum_probs=18.1
Q ss_pred chHHHHHHHHHHHHHHHHHHhHHHHH
Q 007708 283 GWVALMFTTVFLAIMYVWHYGSRKRY 308 (592)
Q Consensus 283 GW~pl~ia~i~~~iM~~W~~G~~~~~ 308 (592)
.......+.+++.+++.++...+.-+
T Consensus 427 ~~~~~~~~~~~~~~~~~~y~~~~~~~ 452 (461)
T PRK10746 427 TRMSLFVGIIFLLAVTLIYKVFGLNR 452 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 45678888888888887777654443
No 30
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=51.30 E-value=2.4e+02 Score=30.89 Aligned_cols=42 Identities=19% Similarity=0.345 Sum_probs=24.5
Q ss_pred hHHHHHHHHHhhcccccc---chhhhhhhHHHHHHHHHHHhhHHh
Q 007708 5 LACLVLIGHFVLQYRGTH---RVAFMFAPVVILWLLSTTGIGIYN 46 (592)
Q Consensus 5 is~~ILv~LF~~Q~~GT~---kvg~~F~Pim~vWf~~i~~~Giyn 46 (592)
+++++++++..+.-+|.+ |+...+.=+.++=++.+.++|++.
T Consensus 130 ~~~~~~~~~~~ln~~gv~~~~~v~~~~~~~~~~~l~~~ii~g~~~ 174 (445)
T PRK11357 130 IAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFW 174 (445)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666667778888865 444444444444444555566654
No 31
>TIGR01773 GABAperm gamma-aminobutyrate permease. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity.
Probab=50.77 E-value=3.7e+02 Score=29.45 Aligned_cols=44 Identities=5% Similarity=0.018 Sum_probs=24.3
Q ss_pred hHHHHHHHHHhhccccccchhhhhhh---HHHHHHHHHHHhhHHhhc
Q 007708 5 LACLVLIGHFVLQYRGTHRVAFMFAP---VVILWLLSTTGIGIYNVI 48 (592)
Q Consensus 5 is~~ILv~LF~~Q~~GT~kvg~~F~P---im~vWf~~i~~~Giyni~ 48 (592)
+++++++++..+.-+|+...+.+--. +.++-++.+.++|+..+.
T Consensus 129 ~~~~~~~~~~~~n~~gv~~~~~~~~~~~~~ki~~l~~~ii~~~~~~~ 175 (452)
T TIGR01773 129 FSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFIILGAVAIF 175 (452)
T ss_pred HHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556666677788888776654432 333333444445554443
No 32
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=45.78 E-value=4e+02 Score=30.13 Aligned_cols=46 Identities=15% Similarity=0.174 Sum_probs=24.7
Q ss_pred ceeeeccchhhh--hhccCCCCccceeeehhhhhhhHHHHhhcccchh
Q 007708 80 GLFLCTTGSEAM--FADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAF 125 (592)
Q Consensus 80 ~v~L~iTG~EAL--yADlGHFg~~~I~~aw~~~V~P~L~L~Y~GQ~A~ 125 (592)
+++.+.+|-|+. .|+==+-.+|.+-.|=...+.-+.++.++|--++
T Consensus 202 ~~~faf~G~E~~a~~a~E~knP~r~~PrAi~~~~i~~~~l~~l~~~~i 249 (507)
T TIGR00910 202 AFIGAYMGVEASASHINELENPGRDYPLAMILLMIAAICLDAIGGFSI 249 (507)
T ss_pred HHHHHHhcHHHHHHHHHHccCCcccccHHHHHHHHHHHHHHHHHHHHH
Confidence 445567898865 5554455666666555443333444444433333
No 33
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=44.95 E-value=99 Score=30.83 Aligned_cols=21 Identities=14% Similarity=0.406 Sum_probs=16.7
Q ss_pred CchHHHHHHHHHHHHHHHHHH
Q 007708 282 GGWVALMFTTVFLAIMYVWHY 302 (592)
Q Consensus 282 GGW~pl~ia~i~~~iM~~W~~ 302 (592)
.+|+-+++|++.+.+-+-|++
T Consensus 179 ~~~~~iiig~i~~~~~~~lkk 199 (206)
T PF06570_consen 179 PPWVYIIIGVIAFALRFYLKK 199 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 489999999998888766653
No 34
>PRK10580 proY putative proline-specific permease; Provisional
Probab=43.66 E-value=2.4e+02 Score=31.04 Aligned_cols=25 Identities=8% Similarity=0.151 Sum_probs=19.0
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhHH
Q 007708 281 NGGWVALMFTTVFLAIMYVWHYGSR 305 (592)
Q Consensus 281 ~GGW~pl~ia~i~~~iM~~W~~G~~ 305 (592)
.+.++.+.++.+.+.+.+.++.-.+
T Consensus 423 p~~~~~~~~~~~~~~~~~~~y~~~~ 447 (457)
T PRK10580 423 PDTRISLYVGFAWIVLLLIGWMFKR 447 (457)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3577788888888888888876543
No 35
>TIGR03428 ureacarb_perm permease, urea carboxylase system. A number of bacteria obtain nitrogen by biotin- and ATP-dependent urea degradation system distinct from urease. The two characterized proteins of this system are the enzymes urea carboxylase and allophanate hydrolase, but other, uncharacterized proteins co-occur as genes encoded nearby in multiple organisms. This family includes predicted permeases of the amino acid permease family, likely to transport either urea or a compound from which urea is derived. It is found so far only Actinobacteria, whereas a number of other species with the urea carboxylase have an adjacent ABC transporter operon.
Probab=42.78 E-value=5.1e+02 Score=28.74 Aligned_cols=23 Identities=17% Similarity=0.275 Sum_probs=15.2
Q ss_pred hHHHHHHHHHhhccccccchhhh
Q 007708 5 LACLVLIGHFVLQYRGTHRVAFM 27 (592)
Q Consensus 5 is~~ILv~LF~~Q~~GT~kvg~~ 27 (592)
++.++++++..+.-+|+...+++
T Consensus 147 ~~~~~~~~~~~in~~g~k~~~~i 169 (475)
T TIGR03428 147 LGSVLLVLTTVINCIGVEWMSRV 169 (475)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHH
Confidence 44556666777888887665543
No 36
>PRK11387 S-methylmethionine transporter; Provisional
Probab=42.56 E-value=2.7e+02 Score=30.88 Aligned_cols=29 Identities=21% Similarity=0.182 Sum_probs=15.7
Q ss_pred ceeeeccchhhh--hhccCCCCccceeeehh
Q 007708 80 GLFLCTTGSEAM--FADLGQFTAGSIKLAFC 108 (592)
Q Consensus 80 ~v~L~iTG~EAL--yADlGHFg~~~I~~aw~ 108 (592)
.++.+.+|-|.. .|+==+--+|+|-.|-.
T Consensus 214 ~~~faf~G~e~~~~~a~E~knP~r~iPrAi~ 244 (471)
T PRK11387 214 AVNFAFSGTELIGIAAGETENPAKVIPVAIR 244 (471)
T ss_pred HHHHHHcCHHHHHHHHHHhcChhhHHHHHHH
Confidence 455677777753 33333455566655543
No 37
>PRK10238 aromatic amino acid transporter; Provisional
Probab=42.41 E-value=2.2e+02 Score=31.51 Aligned_cols=43 Identities=23% Similarity=0.220 Sum_probs=26.4
Q ss_pred ccceeeeccchhh--hhhccCCCCccceeeehhhhhhhHHHHhhcc
Q 007708 78 LAGLFLCTTGSEA--MFADLGQFTAGSIKLAFCCIVFPCLVLQYMG 121 (592)
Q Consensus 78 LG~v~L~iTG~EA--LyADlGHFg~~~I~~aw~~~V~P~L~L~Y~G 121 (592)
++.++.+.+|-|+ ..|+=-+=.+|++-.|=.. +.-.+.+.|++
T Consensus 206 ~~~~~~af~G~e~~~~~aeE~knP~r~iPrAi~~-~~~~i~~~y~~ 250 (456)
T PRK10238 206 MAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ-VIYRILIFYIG 250 (456)
T ss_pred HHHHHHHhcCHHHHHHHHHhhcChhhHHHHHHHH-HHHHHHHHHHH
Confidence 4556778889887 4555556667777777543 23344455654
No 38
>KOG4742 consensus Predicted chitinase [General function prediction only]
Probab=40.26 E-value=13 Score=39.51 Aligned_cols=33 Identities=21% Similarity=0.239 Sum_probs=25.0
Q ss_pred cCCCCccceeeehhhhhhhHHHHhhcccch-----hhcccccccc-Cc
Q 007708 95 LGQFTAGSIKLAFCCIVFPCLVLQYMGQAA-----FLSKNFSAAP-LS 136 (592)
Q Consensus 95 lGHFg~~~I~~aw~~~V~P~L~L~Y~GQ~A-----~ll~~p~~~~-np 136 (592)
=+++||.+||++|-. ..||+. =||+|||-+. ||
T Consensus 172 k~Y~GRG~iQlsWNy---------NYG~ag~alg~dLL~~Pe~V~~np 210 (286)
T KOG4742|consen 172 KSYYGRGPIQLSWNY---------NYGAAGKALGLDLLRNPELVAMNP 210 (286)
T ss_pred CcccccCcccccccc---------cccHhHhhcCchhhcCcchhccCc
Confidence 369999999999988 345543 4788998766 54
No 39
>KOG3643 consensus GABA receptor [Signal transduction mechanisms]
Probab=39.36 E-value=25 Score=39.41 Aligned_cols=90 Identities=22% Similarity=0.310 Sum_probs=58.6
Q ss_pred HcCCCCcceEEecCCccCC----cccchhhHHHHHHHhhheeEEecCchhHHHhhhhhhhhHHHHHHHHHHHHHH-----
Q 007708 177 ALGCFPRVKVVHKARWVRG----QVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIY----- 247 (592)
Q Consensus 177 ~Lg~fPr~ki~hTS~~~~G----QIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiaV~~~m~iTT~L~~~v~~----- 247 (592)
+.|-.||+-+...=++..| |+|+|.+= +..+.=|---=|-++-.+=-.++||.+..|||++...=.-
T Consensus 225 sTG~Y~RL~l~F~l~Rnigf~ilQ~y~PS~L----iVilSWVSFWin~~a~pARv~lGITTVLTMTTl~t~~n~slPrvS 300 (459)
T KOG3643|consen 225 STGNYSRLSLSFQLRRNIGFYILQTYIPSTL----IVILSWVSFWINRDASPARVALGITTVLTMTTLMTSTNESLPRVS 300 (459)
T ss_pred ccccceeEEEEEEEEeeccEEEEeeecchhh----hhHHhHhHhhhccccchhheeeceehHHhHHHHHhhhhccCCCcc
Confidence 4789999999999888888 99999851 1111111112355556666889999999999998765221
Q ss_pred HHhhhhHHHHHHHHHHHHH-HHHH
Q 007708 248 FVWNQSLFLALLYVLFFGS-IEII 270 (592)
Q Consensus 248 ~~w~~~~~~~~~~~~~f~~-ie~~ 270 (592)
.+.-.-+.+..+|+.+|++ +|-+
T Consensus 301 YVKAiDiYL~vCFvfVF~sLLEYA 324 (459)
T KOG3643|consen 301 YVKAIDVYLGVCFVFVFLSLLEYA 324 (459)
T ss_pred ceeeehhhhhHHHHHHHHHHHHHH
Confidence 1233345555677766665 4443
No 40
>TIGR00913 2A0310 amino acid permease (yeast).
Probab=33.39 E-value=6.9e+02 Score=27.54 Aligned_cols=28 Identities=21% Similarity=0.017 Sum_probs=17.2
Q ss_pred eeeeccchhhh--hhccCCCCccceeeehh
Q 007708 81 LFLCTTGSEAM--FADLGQFTAGSIKLAFC 108 (592)
Q Consensus 81 v~L~iTG~EAL--yADlGHFg~~~I~~aw~ 108 (592)
++.+.+|-|+. .|+==+-.+|+|-.|=.
T Consensus 206 ~~~af~G~e~~~~~a~E~knP~r~iPrai~ 235 (478)
T TIGR00913 206 AAFSFGGTELVALTAGEAANPRKSIPRAAK 235 (478)
T ss_pred HHhhhccHHHHHHHHHhhcChhhHHHHHHH
Confidence 45677888853 45555566666666543
No 41
>PRK11049 D-alanine/D-serine/glycine permease; Provisional
Probab=31.10 E-value=5.5e+02 Score=28.48 Aligned_cols=106 Identities=13% Similarity=0.042 Sum_probs=48.0
Q ss_pred ccceeeeccchhhh--hhccCCCCccceeeehhhhhhhHHHHhhcccchhhc--cccc---cccCcccccc----cCcch
Q 007708 78 LAGLFLCTTGSEAM--FADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLS--KNFS---AAPLSFHASI----PDPLR 146 (592)
Q Consensus 78 LG~v~L~iTG~EAL--yADlGHFg~~~I~~aw~~~V~P~L~L~Y~GQ~A~ll--~~p~---~~~npFf~~~----P~~~~ 146 (592)
+..++.+.+|-|+. .|.==+-.+|+|-.|-.. +.-...+-|.-....+. ..++ +.++||-... -++..
T Consensus 217 ~~~~~~af~G~e~~~~~a~E~knP~r~iPrai~~-~~~~~~~~y~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~ 295 (469)
T PRK11049 217 FQIAVFAFVGIELVGTTAAETKDPEKSLPRAINS-IPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAA 295 (469)
T ss_pred HHHHHHHHhcHHHHHHHHHHhcCHhhHHHHHHHH-HHHHHHHHHHHHHHHHeeecCccccCccCCcHHHHHHHcCChhHH
Confidence 34456667788864 344345566666666532 22233333443332222 1122 2235653221 11222
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHcCCCCcc
Q 007708 147 WPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRV 184 (592)
Q Consensus 147 ~P~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ 184 (592)
.-+.+++.++.+-+..+.+.+.=-+....-+-|.+|+.
T Consensus 296 ~~~~~~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~~ 333 (469)
T PRK11049 296 SVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKA 333 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence 22223333333333444444444445555578999964
No 42
>PF02660 G3P_acyltransf: Glycerol-3-phosphate acyltransferase; InterPro: IPR003811 This entry describes glycerol-3-phosphate acyltransferase. It catalyses the transfer of an acyl group from acyl-phosphate (acyl-PO4) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilises acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. ; GO: 0005886 plasma membrane
Probab=29.95 E-value=5.4e+02 Score=25.26 Aligned_cols=85 Identities=12% Similarity=0.240 Sum_probs=46.5
Q ss_pred eEEecCchhHHHhhhhhhhhHHHHHHHHH--HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhccccCCchHHHHHHH
Q 007708 214 TVGFRDTNRLANAYGSACMALTFVSTLLT--SLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTT 291 (592)
Q Consensus 214 v~~F~~s~~l~~AYGiaV~~~m~iTT~L~--~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~K~~~GGW~pl~ia~ 291 (592)
-+.||--.-+|.+.|+-....-..+-+.+ .++...++|....-.+.....+. +- .++ ++.+.+..+..
T Consensus 90 ~l~FkGGKGvAt~~G~ll~l~p~~~li~~~~~~~~~~~~r~~s~~s~~~~~~~~-~~-~~~--------~~~~~~~~~~~ 159 (178)
T PF02660_consen 90 FLKFKGGKGVATSLGVLLALSPWLALIALAVFLILLLITRYVSLASIIAFIILP-IL-AWL--------WGYSLAYVLFA 159 (178)
T ss_pred hhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH-HH-HHH--------HhCCHHHHHHH
Confidence 35699999999999986655444333322 22223334433222211111111 11 111 66777777777
Q ss_pred HHHHHHHHHHHhHHHHH
Q 007708 292 VFLAIMYVWHYGSRKRY 308 (592)
Q Consensus 292 i~~~iM~~W~~G~~~~~ 308 (592)
++..++..|++-+.+++
T Consensus 160 ~~l~~li~~~h~~Ni~r 176 (178)
T PF02660_consen 160 IILALLIIYRHRENIKR 176 (178)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77888888887766653
No 43
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=28.22 E-value=95 Score=31.15 Aligned_cols=59 Identities=22% Similarity=0.172 Sum_probs=37.5
Q ss_pred hhhhhhhHHHHhhcccchhh-ccccccccCcccccccCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHH
Q 007708 107 FCCIVFPCLVLQYMGQAAFL-SKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCY 176 (592)
Q Consensus 107 w~~~V~P~L~L~Y~GQ~A~l-l~~p~~~~npFf~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qa~ 176 (592)
=+.+=+|||+++|+ +.+ +.||.+..| -.+-+--++.|+..=++-||+ +|.+|+++..-+
T Consensus 90 s~llP~PsLVIaYC---l~mqi~~~~~~~~-------~gMsIvcv~~Si~ti~~~~~s-~s~~~~ti~yIi 149 (189)
T PF05313_consen 90 SLLLPFPSLVIAYC---LSMQIYNPGANNN-------VGMSIVCVIMSIITIIVNSVS-GSSGAYTISYII 149 (189)
T ss_pred HHHcCccHHHHHHH---HHheeecCCCcce-------ehhHHHHHHHHHHHHHHHhhh-HhHHHHHHHHHH
Confidence 34456799999996 333 568876665 334444555555555667888 777777666544
No 44
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=24.04 E-value=68 Score=24.85 Aligned_cols=28 Identities=21% Similarity=0.637 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHhHHHHHhhhhcCCCChH
Q 007708 292 VFLAIMYVWHYGSRKRYLYDLHNKVPMK 319 (592)
Q Consensus 292 i~~~iM~~W~~G~~~~~~~~~~~~~~~~ 319 (592)
+++.....|.|-+++|.++|...+++++
T Consensus 20 ~~F~gi~~w~~~~~~k~~~e~aa~lpl~ 47 (49)
T PF05545_consen 20 VFFIGIVIWAYRPRNKKRFEEAANLPLD 47 (49)
T ss_pred HHHHHHHHHHHcccchhhHHHHHccCcc
Confidence 3344445566655555556655555554
No 45
>PRK14417 membrane protein; Provisional
Probab=23.76 E-value=6e+02 Score=26.49 Aligned_cols=18 Identities=22% Similarity=0.350 Sum_probs=14.6
Q ss_pred EecCchhHHHhhhhhhhh
Q 007708 216 GFRDTNRLANAYGSACMA 233 (592)
Q Consensus 216 ~F~~s~~l~~AYGiaV~~ 233 (592)
.||-..-+|-+-|+....
T Consensus 101 ~FKGGKGVAt~~Gvll~l 118 (232)
T PRK14417 101 RFNGGRGIATSLGVALVM 118 (232)
T ss_pred CCcChhHHHHHHHHHHHH
Confidence 599999999999986543
No 46
>cd05900 Ig_Aggrecan Immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. Ig_Aggrecan: immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. These aggregates contribute to the tissue's load bearing properties. In CSPGs, the Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, aggrecan forms cartilage link protein stabilized aggregates with HA. These aggregates contribute to the tissue's load bearing properties. Aggrecan has a wide distribution in connective tissue and extracellular matrices. Members of the vertebrate HPLN (hyaluronan/HA and proteoglycan binding link) protein family are physically linked adjacent to CSPG genes.
Probab=23.50 E-value=1.1e+02 Score=27.84 Aligned_cols=28 Identities=25% Similarity=0.396 Sum_probs=21.9
Q ss_pred eEEEEeecCCCCcEEEEEEEeeecccCC
Q 007708 383 RYLIGRIGPKSYRMYRCIVRNGYKDVPN 410 (592)
Q Consensus 383 R~~v~~l~~~~~~~yR~vvryGY~d~~~ 410 (592)
-..+..+...|.|.|+|.+.+|.-|..+
T Consensus 75 sL~I~nl~~sDsG~Y~C~V~~g~~~~~~ 102 (112)
T cd05900 75 TLEITELRSNDSGTYRCEVMHGIEDNYD 102 (112)
T ss_pred EEEEeecccccCEEEEEEEecCCCCcee
Confidence 3556677777889999999999877654
No 47
>PRK14419 membrane protein; Provisional
Probab=23.30 E-value=7.8e+02 Score=24.81 Aligned_cols=25 Identities=20% Similarity=0.189 Sum_probs=19.0
Q ss_pred eEEecCchhHHHhhhhhhhhHHHHH
Q 007708 214 TVGFRDTNRLANAYGSACMALTFVS 238 (592)
Q Consensus 214 v~~F~~s~~l~~AYGiaV~~~m~iT 238 (592)
-+.||--.-.|.+-|......-..+
T Consensus 98 ~l~FkGGKGVAt~~G~ll~l~p~~~ 122 (199)
T PRK14419 98 WLGFKGGKAVATGLGMLLALSWPVG 122 (199)
T ss_pred hhCCcCccHHHHHHHHHHHHhHHHH
Confidence 3489999999999998877654433
No 48
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=22.99 E-value=3.5e+02 Score=30.81 Aligned_cols=20 Identities=20% Similarity=0.320 Sum_probs=14.6
Q ss_pred HHhhhhhhhhHHHHHHHHHH
Q 007708 224 ANAYGSACMALTFVSTLLTS 243 (592)
Q Consensus 224 ~~AYGiaV~~~m~iTT~L~~ 243 (592)
-+.||+++.+.+++..++..
T Consensus 23 I~~YGl~ialGil~a~~l~~ 42 (460)
T PRK13108 23 VRAYAVCVITGIIVALLIGD 42 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 37899988888887655543
No 49
>PRK11492 hyfE hydrogenase 4 membrane subunit; Provisional
Probab=22.76 E-value=8.3e+02 Score=24.95 Aligned_cols=130 Identities=14% Similarity=0.108 Sum_probs=72.7
Q ss_pred CCCCcceEEecCCccCCcccchhhHHHHHHHhhheeEEecCchhHHHhhhhhhhhHHHHHHHHHHHHHHHHhhhhHHHHH
Q 007708 179 GCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLAL 258 (592)
Q Consensus 179 g~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~ 258 (592)
....|+++.+--+...|.-+-+.+.-.+.+.|..++.-+....+...-..++++...+...++..+ . |+|.+..+
T Consensus 78 r~~~k~~~~re~~p~i~~~~s~ll~~~~~i~s~~~~~~i~~~~~~~~~~~l~~a~~lf~iGl~~~i----~-Rrn~i~~i 152 (216)
T PRK11492 78 YAARKLGDNIEEEPVFGPAMSILLAALIVLLCAFVVQPVKLPMALGLKPALAVSLGHFLLGLLCIV----S-QRNILKQI 152 (216)
T ss_pred HHHHHhCCccccccccchHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHH----H-HhHHHHHH
Confidence 335567766555556677777777777777777777666555555555566666666655555432 2 45554442
Q ss_pred HHHHHHHHHHHH-HH--HHhhcccc----CCchHHHHHHHHHHHHHHHHHHhHHHHHhhhhcCCCChHHHHHh
Q 007708 259 LYVLFFGSIEII-YL--SSACMKIP----NGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQ 324 (592)
Q Consensus 259 ~~~~~f~~ie~~-f~--sa~l~K~~----~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~ 324 (592)
..|..+|-. ++ .+.....| -|-=.-.+++.+++.+.. ..-++..+.++.|++.++
T Consensus 153 ---ig~~~meNgv~L~~~~~~~~~p~~VE~g~~~d~l~av~i~~i~a--------~~i~r~~~sid~~~l~~L 214 (216)
T PRK11492 153 ---FGYCLMENGSHLTLALLAYNAPELVEIGIATDAIFAVIIMVLLA--------RKIYRTHGTLDVNKLTAL 214 (216)
T ss_pred ---HHHHHHHHHHHHHHHHHHhhcchhhhccccccHHHHHHHHHHHH--------HHHHHhcCCCcHHHHHhc
Confidence 233333322 22 22222222 144566777777777776 223344567777776654
No 50
>PF06155 DUF971: Protein of unknown function (DUF971); InterPro: IPR010376 This domain is found in gamma-butyrobetaine dioxygenase and trimethyllysine dioxygenase proteins.; PDB: 2L6N_A 3LUU_A 2L6P_A 3MS5_A 3O2G_A 3N6W_A.
Probab=22.00 E-value=51 Score=28.44 Aligned_cols=15 Identities=27% Similarity=0.474 Sum_probs=11.0
Q ss_pred HHHHHHhhcCCCCcc
Q 007708 561 AYSFLRKNSRSPAVF 575 (592)
Q Consensus 561 ~Y~FLRkNcR~~~~~ 575 (592)
-|.|||+|||.+.-.
T Consensus 25 ~~~~LRd~C~Ca~C~ 39 (89)
T PF06155_consen 25 PYEWLRDNCPCAECR 39 (89)
T ss_dssp EHHHHHHT-SSSSTC
T ss_pred CHHHHhccCCChhhc
Confidence 378999999987644
No 51
>PRK00701 manganese transport protein MntH; Reviewed
Probab=21.82 E-value=5.7e+02 Score=28.66 Aligned_cols=33 Identities=15% Similarity=0.192 Sum_probs=25.9
Q ss_pred cchhhHHHHHHHhhheeEEecCchhHHHhhhhh
Q 007708 198 YIPEINWVLMILSLAVTVGFRDTNRLANAYGSA 230 (592)
Q Consensus 198 YIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGia 230 (592)
|=+.++|++.+...+..+++.-.+-+|.|-|+-
T Consensus 104 ~~~~~~~~~~~~~~l~~~~~~~~e~~G~a~al~ 136 (439)
T PRK00701 104 YPRPVVWFLWIQAELAIMATDLAEVIGAAIALK 136 (439)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 557789999888888888888888777776664
No 52
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=21.09 E-value=4.8e+02 Score=22.81 Aligned_cols=57 Identities=18% Similarity=0.413 Sum_probs=30.4
Q ss_pred HhhhhHHHHHHHHHHHHH--HHH-HHHHHhhccccCCchHHH-----HHHHHHHHHHHHHHHhHHH
Q 007708 249 VWNQSLFLALLYVLFFGS--IEI-IYLSSACMKIPNGGWVAL-----MFTTVFLAIMYVWHYGSRK 306 (592)
Q Consensus 249 ~w~~~~~~~~~~~~~f~~--ie~-~f~sa~l~K~~~GGW~pl-----~ia~i~~~iM~~W~~G~~~ 306 (592)
.||.|.-+....+++-.. .=. .+|...+..+.=||| |+ .-++++..+.+++-|...+
T Consensus 6 yWr~n~rl~~~lL~iW~vvsfg~~~lfa~~Ln~~~~~Gf-Plgfw~aaQGsi~~fviLi~~Ya~~m 70 (81)
T PF13937_consen 6 YWRKNLRLIAILLAIWFVVSFGVGILFADELNQITFGGF-PLGFWFAAQGSIIVFVILIFVYAWRM 70 (81)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeCCC-ChHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 366554444333332222 223 567788888777776 54 3355555555555555444
No 53
>PF08733 PalH: PalH/RIM21; InterPro: IPR014844 PalH (also known as RIM21) is a transmembrane protein required for proteolytic cleavage of Rim101/PacC transcription factors which are activated by C-terminal proteolytic processing. Rim101/PacC family proteins play a key role in pH-dependent responses and PalH has been implicated as a pH sensor [].
Probab=20.55 E-value=5.4e+02 Score=28.11 Aligned_cols=135 Identities=18% Similarity=0.234 Sum_probs=79.4
Q ss_pred hhhhhhhhHHHHHHcCC-CCcceEEecCCccCCcccchhhHHHHHHHhhheeEEec--C-----chhHHHhhhhhhhhHH
Q 007708 164 VISATFSTVKQCYALGC-FPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFR--D-----TNRLANAYGSACMALT 235 (592)
Q Consensus 164 ~Isg~FSi~~Qa~~Lg~-fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~--~-----s~~l~~AYGiaV~~~m 235 (592)
+||-+|.-+.|..-+=. |||-|= +..|=.+.-+|+++..++-+..+ . .+....---.....-.
T Consensus 168 lis~~~l~l~qvqiv~rlF~R~~e---------K~~i~~vG~~L~i~~~il~ai~~f~~~~~~~~~~~~~lp~~~yl~~i 238 (348)
T PF08733_consen 168 LISNFFLQLAQVQIVIRLFPRQKE---------KRIIFWVGFILIILDQILWAINQFSYFDSDPNSFLDILPAFSYLFRI 238 (348)
T ss_pred HHHHHHHHHHHHHHHHHhhcccCc---------EEEEeeHHHHHHHHHHHHHHHHHhccCCCCccccccchHHHHHHHHH
Confidence 57778888888876544 488542 33366667777776655443333 2 2222221222233334
Q ss_pred HHHHHHHHHHHHHHhhh--------hHHHHHHHHHHHHHHHHHHHHHhhccccCCch---HHHHHHHHHHHHHHHHHHhH
Q 007708 236 FVSTLLTSLVIYFVWNQ--------SLFLALLYVLFFGSIEIIYLSSACMKIPNGGW---VALMFTTVFLAIMYVWHYGS 304 (592)
Q Consensus 236 ~iTT~L~~~v~~~~w~~--------~~~~~~~~~~~f~~ie~~f~sa~l~K~~~GGW---~pl~ia~i~~~iM~~W~~G~ 304 (592)
.+-++...++....|.+ +.+...++..+...+..+||..-..+..-=|| ++-+..++...+-+=|-+-=
T Consensus 239 al~~~ya~~v~~y~~~k~k~~~~~~~~~~L~il~~~~i~l~~vffI~dis~~~v~~w~~~~~~~~~~~~tVivWEWi~ri 318 (348)
T PF08733_consen 239 ALSTLYAAWVIYYIISKKKYCFDYKQMIPLAILNLLLILLPVVFFILDISNWWVSGWSEYFRWVLYVAATVIVWEWINRI 318 (348)
T ss_pred HHHHHHHHHHHHHHHhhhhhheecchHHHHHHHHHHHHHHHHHhheeEccchhhhhHHHHHHHHHHHHHhhhHHHhhhHH
Confidence 45555555555555543 44556677777778888999998888888888 56666666555555454443
Q ss_pred HHH
Q 007708 305 RKR 307 (592)
Q Consensus 305 ~~~ 307 (592)
+++
T Consensus 319 e~l 321 (348)
T PF08733_consen 319 ERL 321 (348)
T ss_pred HHH
Confidence 333
No 54
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=20.08 E-value=35 Score=36.55 Aligned_cols=60 Identities=13% Similarity=0.422 Sum_probs=0.0
Q ss_pred HHHHhh--hhHHHHHHHHHHHHHHHHHHHHHhhccccCCchHHHHHH---HHHHHHHHHHHHhHHHHH
Q 007708 246 IYFVWN--QSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFT---TVFLAIMYVWHYGSRKRY 308 (592)
Q Consensus 246 ~~~~w~--~~~~~~~~~~~~f~~ie~~f~sa~l~K~~~GGW~pl~ia---~i~~~iM~~W~~G~~~~~ 308 (592)
|.+.|+ -++|..+.|++.|+.-=++...|.+ .|=.||++++- .++|.-.++|-|-+....
T Consensus 126 m~lLr~~GAs~WtiLaFcLAF~LaivlLIIAv~---L~qaWfT~L~dL~WL~LFlaiLIWlY~H~~~~ 190 (381)
T PF05297_consen 126 MWLLRELGASFWTILAFCLAFLLAIVLLIIAVL---LHQAWFTILVDLYWLLLFLAILIWLYVHDQRH 190 (381)
T ss_dssp --------------------------------------------------------------------
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 444455 3677778888777654444455554 46789999875 456777889988776653
Done!