BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007711
(592 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 142/298 (47%), Gaps = 32/298 (10%)
Query: 289 KLKR---SELEAACEDFSN--VIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLE 343
+LKR EL+ A ++FSN ++G G VYKG L++G + ++ + E
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLK----EERXQGGE 79
Query: 344 VQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH--LD 401
+QF+ +++ +S H+N + L GFC P R++V+ Y NG++ + + LD
Sbjct: 80 LQFQTEVEMISMAVHRNLLRLRGFC--MTPTERLLVYPYMANGSVASCLRERPESQPPLD 137
Query: 402 WGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE- 459
W R RIA+G A L ++H +P I H + ++ + L E++ A + D + +
Sbjct: 138 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX 197
Query: 460 ---------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLV------DNGSLE 504
+ +V+ +GV+L E++TG+ + + D+ L
Sbjct: 198 HVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 257
Query: 505 DWAADYLSGVQPLQQFVDPTLS-SFDEEQLETLGELIKSCVRADPEKRPTMRDIAAIL 561
DW L + L+ VD L ++ +E++E L ++ C ++ P +RP M ++ +L
Sbjct: 258 DWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 139/298 (46%), Gaps = 32/298 (10%)
Query: 289 KLKR---SELEAACEDF--SNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLE 343
+LKR EL+ A ++F N++G G VYKG L++G + ++ + E
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLK----EERTQGGE 71
Query: 344 VQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH--LD 401
+QF+ +++ +S H+N + L GFC P R++V+ Y NG++ + + LD
Sbjct: 72 LQFQTEVEMISMAVHRNLLRLRGFC--MTPTERLLVYPYMANGSVASCLRERPESQPPLD 129
Query: 402 WGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWN------- 453
W R RIA+G A L ++H +P I H + ++ + L E++ A + D
Sbjct: 130 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX 189
Query: 454 ---EIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLV------DNGSLE 504
+ +V+ +GV+L E++TG+ + + D+ L
Sbjct: 190 HVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249
Query: 505 DWAADYLSGVQPLQQFVDPTL-SSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAIL 561
DW L + L+ VD L ++ +E++E L ++ C ++ P +RP M ++ +L
Sbjct: 250 DWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 128/286 (44%), Gaps = 34/286 (11%)
Query: 294 ELEAACEDFSN--VIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKID 351
+LE A +F + +IG G VYKG L +G ++ + +F +I+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQG-----IEEFETEIE 87
Query: 352 TLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE--SEHLDWGMRLRIA 409
TLS H + V+LIGFC+E +++++Y NG L H++ + + + W RL I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEM--ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEIC 145
Query: 410 MGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNE-----------IAMA 458
+G A L ++H I H + S + L E++ K++D + +
Sbjct: 146 IGAARGLHYLH--TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKG 203
Query: 459 EMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR------LPYLVDNGSLEDWAADYLS 512
+ +VY+FGV+LFE++ R LP + N L +WA + +
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVN--LAEWAVESHN 261
Query: 513 GVQPLQQFVDPTLS-SFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
Q L+Q VDP L+ E L G+ C+ E RP+M D+
Sbjct: 262 NGQ-LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 128/286 (44%), Gaps = 34/286 (11%)
Query: 294 ELEAACEDFSN--VIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKID 351
+LE A +F + +IG G VYKG L +G ++ + +F +I+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQG-----IEEFETEIE 87
Query: 352 TLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE--SEHLDWGMRLRIA 409
TLS H + V+LIGFC+E +++++Y NG L H++ + + + W RL I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEM--ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEIC 145
Query: 410 MGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNE-----------IAMA 458
+G A L ++H I H + S + L E++ K++D + +
Sbjct: 146 IGAARGLHYLH--TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKG 203
Query: 459 EMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR------LPYLVDNGSLEDWAADYLS 512
+ +VY+FGV+LFE++ R LP + N L +WA + +
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVN--LAEWAVESHN 261
Query: 513 GVQPLQQFVDPTLS-SFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
Q L+Q VDP L+ E L G+ C+ E RP+M D+
Sbjct: 262 NGQ-LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 126/277 (45%), Gaps = 21/277 (7%)
Query: 304 NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVN 363
N +G G VYKG ++N + L+ QF ++I ++K H+N V
Sbjct: 37 NKMGEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 94
Query: 364 LIGFCEEEEPFTRMMVFEYAPNGTLFEHIH-IKESEHLDWGMRLRIAMGMAYCLEHMHQL 422
L+GF + + +V+ Y PNG+L + + + + L W MR +IA G A + +H+
Sbjct: 95 LLGFSSDGDDLC--LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE- 151
Query: 423 NPPIAHNYLNSSAVHLTEDYAAKLSDL-------SFWNEIAMAEMXXXXXXXXXXXXXXX 475
N I H + S+ + L E + AK+SD F + + +
Sbjct: 152 NHHI-HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGE 210
Query: 476 ---XXNVYNFGVLLFEMVTGRLPYLVDNGS---LEDWAADYLSGVQPLQQFVDPTLSSFD 529
++Y+FGV+L E++TG LP + ++ L D + + ++ ++D ++ D
Sbjct: 211 ITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDAD 269
Query: 530 EEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 566
+E + + C+ KRP ++ + +L+E+T
Sbjct: 270 STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 127/277 (45%), Gaps = 21/277 (7%)
Query: 304 NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVN 363
N +G G VYKG ++N + L+ QF ++I ++K H+N V
Sbjct: 37 NKMGEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 94
Query: 364 LIGFCEEEEPFTRMMVFEYAPNGTLFEHIH-IKESEHLDWGMRLRIAMGMAYCLEHMHQL 422
L+GF + + +V+ Y PNG+L + + + + L W MR +IA G A + +H+
Sbjct: 95 LLGFSSDGDDLC--LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE- 151
Query: 423 NPPIAHNYLNSSAVHLTEDYAAKLSDLSFWN---EIAMAEMXXXXXXXXXXXXXXX---- 475
N I H + S+ + L E + AK+SD + A M
Sbjct: 152 NHHI-HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGE 210
Query: 476 ---XXNVYNFGVLLFEMVTGRLPYLVDNGS---LEDWAADYLSGVQPLQQFVDPTLSSFD 529
++Y+FGV+L E++TG LP + ++ L D + + ++ ++D ++ D
Sbjct: 211 ITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDAD 269
Query: 530 EEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 566
+E + + C+ KRP ++ + +L+E+T
Sbjct: 270 STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 127/277 (45%), Gaps = 21/277 (7%)
Query: 304 NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVN 363
N +G G VYKG ++N + L+ QF ++I ++K H+N V
Sbjct: 31 NKMGEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 88
Query: 364 LIGFCEEEEPFTRMMVFEYAPNGTLFEHIH-IKESEHLDWGMRLRIAMGMAYCLEHMHQL 422
L+GF + + +V+ Y PNG+L + + + + L W MR +IA G A + +H+
Sbjct: 89 LLGFSSDGDDLC--LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE- 145
Query: 423 NPPIAHNYLNSSAVHLTEDYAAKLSDLSFWN---EIAMAEMXXXXXXXXXXXXXXX---- 475
N I H + S+ + L E + AK+SD + A M
Sbjct: 146 NHHI-HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGE 204
Query: 476 ---XXNVYNFGVLLFEMVTGRLPYLVDNGS---LEDWAADYLSGVQPLQQFVDPTLSSFD 529
++Y+FGV+L E++TG LP + ++ L D + + ++ ++D ++ D
Sbjct: 205 ITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDAD 263
Query: 530 EEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 566
+E + + C+ KRP ++ + +L+E+T
Sbjct: 264 STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 300
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 121/277 (43%), Gaps = 21/277 (7%)
Query: 304 NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVN 363
N G G VYKG ++N + L+ QF ++I +K H+N V
Sbjct: 28 NKXGEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVE 85
Query: 364 LIGFCEEEEPFTRMMVFEYAPNGTLFEHIH-IKESEHLDWGMRLRIAMGMAYCLEHMHQL 422
L+GF + + +V+ Y PNG+L + + + + L W R +IA G A + +H+
Sbjct: 86 LLGFSSDGDDLC--LVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHE- 142
Query: 423 NPPIAHNYLNSSAVHLTEDYAAKLSDLS-------FWNEIAMAEMXXXXXXXXXXXXXXX 475
N I H + S+ + L E + AK+SD F + + +
Sbjct: 143 NHHI-HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGE 201
Query: 476 ---XXNVYNFGVLLFEMVTGRLPYLVDNGS---LEDWAADYLSGVQPLQQFVDPTLSSFD 529
++Y+FGV+L E++TG LP + ++ L D + + ++ ++D + D
Sbjct: 202 ITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDAD 260
Query: 530 EEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 566
+E + C+ KRP ++ + +L+E T
Sbjct: 261 STSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQEXTA 297
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 107/236 (45%), Gaps = 18/236 (7%)
Query: 336 KDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIK 395
+DW F ++ L +H N + ++G C+ ++ + P G+L+ +H
Sbjct: 44 RDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEG 103
Query: 396 ESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLS--DLSFWN 453
+ +D ++ A+ MA + +H L P I + LNS +V + ED A++S D+ F
Sbjct: 104 TNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163
Query: 454 E-----IAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAA 508
+ A A + ++++F VLL+E+VT +P+ D ++E
Sbjct: 164 QSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPF-ADLSNMEIGMK 222
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
L G++P + P +S + +L+K C+ DP KRP I IL ++
Sbjct: 223 VALEGLRPT---IPPGISPH-------VSKLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 119/278 (42%), Gaps = 32/278 (11%)
Query: 294 ELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTL 353
E+EA+ S IGS GTVYKG V + P+ + FR ++ L
Sbjct: 32 EIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPT----PEQFQA-FRNEVAVL 86
Query: 354 SKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMA 413
K H N + +G+ ++ +V ++ +L++H+H++E++ + + + IA A
Sbjct: 87 RKTRHVNILLFMGYMTKD---NLAIVTQWCEGSSLYKHLHVQETKFQMFQL-IDIARQTA 142
Query: 414 YCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDL------SFWNEIAMAE-------- 459
++++H N I H + S+ + L E K+ D S W+ E
Sbjct: 143 QGMDYLHAKN--IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLW 200
Query: 460 MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQ 519
M +VY++G++L+E++TG LPY N + ++ G +
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ---IIFMVG----RG 253
Query: 520 FVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+ P LS + + + L+ CV+ E+RP I
Sbjct: 254 YASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQI 291
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 18/235 (7%)
Query: 336 KDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIK 395
+DW F ++ L +H N + ++G C+ ++ + P G+L+ +H
Sbjct: 44 RDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEG 103
Query: 396 ESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLS--DLSF-- 451
+ +D ++ A+ A +H L P I + LNS +V + ED A++S D+ F
Sbjct: 104 TNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTARISXADVKFSF 163
Query: 452 ---WNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAA 508
A A + + ++F VLL+E+VT +P+ D + E
Sbjct: 164 QSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPF-ADLSNXEIGXK 222
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
L G++P + P +S + +L K C DP KRP I IL +
Sbjct: 223 VALEGLRPT---IPPGISPH-------VSKLXKICXNEDPAKRPKFDXIVPILEK 267
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 113/268 (42%), Gaps = 32/268 (11%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
IGS GTVYKG V + P+ L+ F+ ++ L K H N + +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQA-FKNEVGVLRKTRHVNILLFM 75
Query: 366 GFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPP 425
G+ + + +V ++ +L+ H+HI E++ + + IA A ++++H +
Sbjct: 76 GYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKS-- 129
Query: 426 IAHNYLNSSAVHLTEDYAAKLSDL------SFWNEIAMAE--------MXXXXXXXXXXX 471
I H L S+ + L ED K+ D S W+ E M
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 472 XXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+VY FG++L+E++TG+LPY N + ++ G + ++ P LS
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVG----RGYLSPDLSKVRSN 242
Query: 532 QLETLGELIKSCVRADPEKRPTMRDIAA 559
+ + L+ C++ ++RP I A
Sbjct: 243 CPKAMKRLMAECLKKKRDERPLFPQILA 270
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 113/268 (42%), Gaps = 32/268 (11%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
IGS GTVYKG V + P+ L+ F+ ++ L K H N + +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQA-FKNEVGVLRKTRHVNILLFM 72
Query: 366 GFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPP 425
G+ + + +V ++ +L+ H+HI E++ + + IA A ++++H +
Sbjct: 73 GYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKS-- 126
Query: 426 IAHNYLNSSAVHLTEDYAAKLSDL------SFWNEIAMAE--------MXXXXXXXXXXX 471
I H L S+ + L ED K+ D S W+ E M
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 472 XXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+VY FG++L+E++TG+LPY N + ++ G + ++ P LS
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVG----RGYLSPDLSKVRSN 239
Query: 532 QLETLGELIKSCVRADPEKRPTMRDIAA 559
+ + L+ C++ ++RP I A
Sbjct: 240 CPKAMKRLMAECLKKKRDERPLFPQILA 267
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 113/268 (42%), Gaps = 32/268 (11%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
IGS GTVYKG V + P+ L+ F+ ++ L K H N + +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQA-FKNEVGVLRKTRHVNILLFM 75
Query: 366 GFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPP 425
G+ + + +V ++ +L+ H+HI E++ + + IA A ++++H +
Sbjct: 76 GYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKS-- 129
Query: 426 IAHNYLNSSAVHLTEDYAAKLSDL------SFWNEIAMAE--------MXXXXXXXXXXX 471
I H L S+ + L ED K+ D S W+ E M
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 472 XXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+VY FG++L+E++TG+LPY N + ++ G + ++ P LS
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVG----RGYLSPDLSKVRSN 242
Query: 532 QLETLGELIKSCVRADPEKRPTMRDIAA 559
+ + L+ C++ ++RP I A
Sbjct: 243 CPKAMKRLMAECLKKKRDERPLFPQILA 270
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 113/268 (42%), Gaps = 32/268 (11%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
IGS GTVYKG V + P+ L+ F+ ++ L K H N + +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQA-FKNEVGVLRKTRHVNILLFM 70
Query: 366 GFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPP 425
G+ + + +V ++ +L+ H+HI E++ + + IA A ++++H +
Sbjct: 71 GYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKS-- 124
Query: 426 IAHNYLNSSAVHLTEDYAAKLSDL------SFWNEIAMAE--------MXXXXXXXXXXX 471
I H L S+ + L ED K+ D S W+ E M
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 472 XXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+VY FG++L+E++TG+LPY N + ++ G + ++ P LS
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVG----RGYLSPDLSKVRSN 237
Query: 532 QLETLGELIKSCVRADPEKRPTMRDIAA 559
+ + L+ C++ ++RP I A
Sbjct: 238 CPKAMKRLMAECLKKKRDERPLFPQILA 265
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 113/268 (42%), Gaps = 32/268 (11%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
IGS GTVYKG V + P+ L+ F+ ++ L K H N + +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQA-FKNEVGVLRKTRHVNILLFM 70
Query: 366 GFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPP 425
G+ + + +V ++ +L+ H+HI E++ + + IA A ++++H +
Sbjct: 71 GYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKS-- 124
Query: 426 IAHNYLNSSAVHLTEDYAAKLSDL------SFWNEIAMAE--------MXXXXXXXXXXX 471
I H L S+ + L ED K+ D S W+ E M
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 472 XXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+VY FG++L+E++TG+LPY N + ++ G + ++ P LS
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVG----RGYLSPDLSKVRSN 237
Query: 532 QLETLGELIKSCVRADPEKRPTMRDIAA 559
+ + L+ C++ ++RP I A
Sbjct: 238 CPKAMKRLMAECLKKKRDERPLFPQILA 265
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 118/279 (42%), Gaps = 36/279 (12%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
IGS GTVYKG V + P+ L+ F+ ++ L K H N + +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQA-FKNEVGVLRKTRHVNILLFM 86
Query: 366 GFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPP 425
G+ + + +V ++ +L+ H+H E++ + + IA A ++++H
Sbjct: 87 GYSTKPQ---LAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHA--KS 140
Query: 426 IAHNYLNSSAVHLTEDYAAKLSDL------SFWNEIAMAE--------MXXXXXXXXXXX 471
I H L S+ + L ED K+ D S W+ E M
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 472 XXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+VY FG++L+E++TG+LPY N + D + + + + P LS
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIEMVG-----RGSLSPDLSKVRSN 253
Query: 532 QLETLGELIKSCVRADPEKRPT----MRDIAAILREITG 566
+ + L+ C++ ++RP+ + +I + RE++G
Sbjct: 254 CPKRMKRLMAECLKKKRDERPSFPRILAEIEELARELSG 292
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 112/268 (41%), Gaps = 32/268 (11%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
IGS GTVYKG V + P+ L+ F+ ++ L K H N + +
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQA-FKNEVGVLRKTRHVNILLFM 97
Query: 366 GFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPP 425
G+ + + +V ++ +L+ H+HI E++ + + IA A ++++H
Sbjct: 98 GYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA--KS 151
Query: 426 IAHNYLNSSAVHLTEDYAAKLSDL------SFWNEIAMAE--------MXXXXXXXXXXX 471
I H L S+ + L ED K+ D S W+ E M
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 472 XXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+VY FG++L+E++TG+LPY N + ++ G + ++ P LS
Sbjct: 212 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVG----RGYLSPDLSKVRSN 264
Query: 532 QLETLGELIKSCVRADPEKRPTMRDIAA 559
+ + L+ C++ ++RP I A
Sbjct: 265 CPKAMKRLMAECLKKKRDERPLFPQILA 292
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 112/268 (41%), Gaps = 32/268 (11%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
IGS GTVYKG V + P+ L+ F+ ++ L K H N + +
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQA-FKNEVGVLRKTRHVNILLFM 90
Query: 366 GFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPP 425
G+ + + +V ++ +L+ H+HI E++ + + IA A ++++H
Sbjct: 91 GYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA--KS 144
Query: 426 IAHNYLNSSAVHLTEDYAAKLSDL------SFWNEIAMAE--------MXXXXXXXXXXX 471
I H L S+ + L ED K+ D S W+ E M
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 204
Query: 472 XXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+VY FG++L+E++TG+LPY N + ++ G + ++ P LS
Sbjct: 205 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVG----RGYLSPDLSKVRSN 257
Query: 532 QLETLGELIKSCVRADPEKRPTMRDIAA 559
+ + L+ C++ ++RP I A
Sbjct: 258 CPKAMKRLMAECLKKKRDERPLFPQILA 285
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 112/268 (41%), Gaps = 32/268 (11%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
IGS GTVYKG V + P+ L+ F+ ++ L K H N + +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQA-FKNEVGVLRKTRHVNILLFM 98
Query: 366 GFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPP 425
G+ + + +V ++ +L+ H+HI E++ + + IA A ++++H
Sbjct: 99 GYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA--KS 152
Query: 426 IAHNYLNSSAVHLTEDYAAKLSDL------SFWNEIAMAE--------MXXXXXXXXXXX 471
I H L S+ + L ED K+ D S W+ E M
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 472 XXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+VY FG++L+E++TG+LPY N + ++ G + ++ P LS
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVG----RGYLSPDLSKVRSN 265
Query: 532 QLETLGELIKSCVRADPEKRPTMRDIAA 559
+ + L+ C++ ++RP I A
Sbjct: 266 CPKAMKRLMAECLKKKRDERPLFPQILA 293
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 112/268 (41%), Gaps = 32/268 (11%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
IGS GTVYKG V + P+ L+ F+ ++ L K H N + +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQA-FKNEVGVLRKTRHVNILLFM 98
Query: 366 GFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPP 425
G+ + + +V ++ +L+ H+HI E++ + + IA A ++++H
Sbjct: 99 GYSTKPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA--KS 152
Query: 426 IAHNYLNSSAVHLTEDYAAKLSDL------SFWNEIAMAE--------MXXXXXXXXXXX 471
I H L S+ + L ED K+ D S W+ E M
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 472 XXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+VY FG++L+E++TG+LPY N + ++ G + ++ P LS
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVG----RGYLSPDLSKVRSN 265
Query: 532 QLETLGELIKSCVRADPEKRPTMRDIAA 559
+ + L+ C++ ++RP I A
Sbjct: 266 CPKAMKRLMAECLKKKRDERPLFPQILA 293
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 118/279 (42%), Gaps = 36/279 (12%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
IGS GTVYKG V + P+ L+ F+ ++ L K H N + +
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQA-FKNEVGVLRKTRHVNILLFM 74
Query: 366 GFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPP 425
G+ + + +V ++ +L+ H+H E++ + + IA A ++++H
Sbjct: 75 GYSTKPQ---LAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHA--KS 128
Query: 426 IAHNYLNSSAVHLTEDYAAKLSDL------SFWNEIAMAE--------MXXXXXXXXXXX 471
I H L S+ + L ED K+ D S W+ E M
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 188
Query: 472 XXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+VY FG++L+E++TG+LPY N + D + + + + P LS
Sbjct: 189 PYSFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIEMVG-----RGSLSPDLSKVRSN 241
Query: 532 QLETLGELIKSCVRADPEKRPT----MRDIAAILREITG 566
+ + L+ C++ ++RP+ + +I + RE++G
Sbjct: 242 CPKRMKRLMAECLKKKRDERPSFPRILAEIEELARELSG 280
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 112/268 (41%), Gaps = 32/268 (11%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
IGS GTVYKG V + P+ L+ F+ ++ L K H N + +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQA-FKNEVGVLRKTRHVNILLFM 70
Query: 366 GFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPP 425
G+ + +V ++ +L+ H+HI E++ + + IA A ++++H +
Sbjct: 71 GYSTAPQ---LAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKS-- 124
Query: 426 IAHNYLNSSAVHLTEDYAAKLSDL------SFWNEIAMAE--------MXXXXXXXXXXX 471
I H L S+ + L ED K+ D S W+ E M
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 472 XXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+VY FG++L+E++TG+LPY N + ++ G + ++ P LS
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIFMVG----RGYLSPDLSKVRSN 237
Query: 532 QLETLGELIKSCVRADPEKRPTMRDIAA 559
+ + L+ C++ ++RP I A
Sbjct: 238 CPKAMKRLMAECLKKKRDERPLFPQILA 265
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 122/295 (41%), Gaps = 37/295 (12%)
Query: 287 VPKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNL---E 343
+P L +E+E + IG G V+KG L + + +
Sbjct: 13 LPTLADNEIE-----YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 344 VQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWG 403
+F++++ +S +NH N V L G MV E+ P G L+ H + ++ + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHN----PPRMVMEFVPCGDLY-HRLLDKAHPIKWS 122
Query: 404 MRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTE-----DYAAKLSDLSFWNE---- 454
++LR+ + +A +E+M NPPI H L S + L AK++D S +
Sbjct: 123 VKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHS 182
Query: 455 ----IAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADY 510
+ + + Y+F ++L+ ++TG P+ ++++
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF-------DEYSYGK 235
Query: 511 LSGVQPL-QQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
+ + + ++ + PT+ E+ L +I+ C DP+KRP I L E+
Sbjct: 236 IKFINMIREEGLRPTIP---EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 114/274 (41%), Gaps = 32/274 (11%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
IGS GTVYKG V + P+ L+ F+ ++ L K H N + +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQA-FKNEVGVLRKTRHVNILLFM 86
Query: 366 GFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPP 425
G+ + +V ++ +L+ H+H E++ + + IA A ++++H +
Sbjct: 87 GYSTAPQ---LAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKS-- 140
Query: 426 IAHNYLNSSAVHLTEDYAAKLSDL------SFWNEIAMAE--------MXXXXXXXXXXX 471
I H L S+ + L ED K+ D S W+ E M
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 472 XXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+VY FG++L+E++TG+LPY N + D + + + + P LS
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIEMVG-----RGSLSPDLSKVRSN 253
Query: 532 QLETLGELIKSCVRADPEKRPTMRDIAAILREIT 565
+ + L+ C++ ++RP+ I A + E+
Sbjct: 254 CPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 121/295 (41%), Gaps = 37/295 (12%)
Query: 287 VPKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNL---E 343
+P L +E+E + IG G V+KG L + + +
Sbjct: 13 LPTLADNEIE-----YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 344 VQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWG 403
+F++++ +S +NH N V L G MV E+ P G L+ H + ++ + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHN----PPRMVMEFVPCGDLY-HRLLDKAHPIKWS 122
Query: 404 MRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTE-----DYAAKLSDLSFWNE---- 454
++LR+ + +A +E+M NPPI H L S + L AK++D +
Sbjct: 123 VKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS 182
Query: 455 ----IAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADY 510
+ + + Y+F ++L+ ++TG P+ ++++
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF-------DEYSYGK 235
Query: 511 LSGVQPL-QQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
+ + + ++ + PT+ E+ L +I+ C DP+KRP I L E+
Sbjct: 236 IKFINMIREEGLRPTIP---EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 121/295 (41%), Gaps = 37/295 (12%)
Query: 287 VPKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNL---E 343
+P L +E+E + IG G V+KG L + + +
Sbjct: 13 LPTLADNEIE-----YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 344 VQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWG 403
+F++++ +S +NH N V L G MV E+ P G L+ H + ++ + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPP----RMVMEFVPCGDLY-HRLLDKAHPIKWS 122
Query: 404 MRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTE-----DYAAKLSDL--------S 450
++LR+ + +A +E+M NPPI H L S + L AK++D S
Sbjct: 123 VKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHS 182
Query: 451 FWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADY 510
+ + + Y+F ++L+ ++TG P+ ++++
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF-------DEYSYGK 235
Query: 511 LSGVQPL-QQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
+ + + ++ + PT+ E+ L +I+ C DP+KRP I L E+
Sbjct: 236 IKFINMIREEGLRPTIP---EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 114/269 (42%), Gaps = 27/269 (10%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
IG+ GTV++ +G ++ +D+ +F +++ + ++ H N V +
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILME---QDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 366 GFCEEEEPFTRMMVFEYAPNGTLFEHIHIKES-EHLDWGMRLRIAMGMAYCLEHMHQLNP 424
G + P +V EY G+L+ +H + E LD RL +A +A + ++H NP
Sbjct: 101 GAVTQ--PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 425 PIAHNYLNSSAVHLTEDYAAKLSDLS---------FWNEIAMAEMXXXXXXXXXXXXXXX 475
PI H L S + + + Y K+ D ++ A
Sbjct: 159 PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNE 218
Query: 476 XXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLET 535
+VY+FGV+L+E+ T + P+ N + A + + + ++P +++
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAA-------- 270
Query: 536 LGELIKSCVRADPEKRPTMRDIAAILREI 564
+I+ C +P KRP+ I +LR +
Sbjct: 271 ---IIEGCWTNEPWKRPSFATIMDLLRPL 296
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 114/269 (42%), Gaps = 27/269 (10%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
IG+ GTV++ +G ++ +D+ +F +++ + ++ H N V +
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILME---QDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 366 GFCEEEEPFTRMMVFEYAPNGTLFEHIHIKES-EHLDWGMRLRIAMGMAYCLEHMHQLNP 424
G + P +V EY G+L+ +H + E LD RL +A +A + ++H NP
Sbjct: 101 GAVTQ--PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 425 PIAHNYLNSSAVHLTEDYAAKLSDLS---------FWNEIAMAEMXXXXXXXXXXXXXXX 475
PI H L S + + + Y K+ D ++ A
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNE 218
Query: 476 XXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLET 535
+VY+FGV+L+E+ T + P+ N + A + + + ++P +++
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAA-------- 270
Query: 536 LGELIKSCVRADPEKRPTMRDIAAILREI 564
+I+ C +P KRP+ I +LR +
Sbjct: 271 ---IIEGCWTNEPWKRPSFATIMDLLRPL 296
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 111/276 (40%), Gaps = 48/276 (17%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ-FRKKIDTLSKVNHKNFVNL 364
+G G V+ GT + + P N+ + F ++ + K+ H+ V L
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLK-------PGNMSPEAFLQEAQVMKKLRHEKLVQL 245
Query: 365 IGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW----GMRLRIAMGMAYCLEHMH 420
EE + +V EY G+L + + + ++L M +IA GMAY +E M+
Sbjct: 246 YAVVSEEPIY---IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMN 301
Query: 421 QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI----------AMAEMXXXXXXXXXX 470
+ H L ++ + + E+ K++D I A +
Sbjct: 302 YV-----HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALY 356
Query: 471 XXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAADYLSGVQPLQQFVDPTLSS 527
+V++FG+LL E+ T GR+PY +V+ L+ Y P
Sbjct: 357 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----------- 405
Query: 528 FDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
E E+L +L+ C R DPE+RPT + A L +
Sbjct: 406 ---ECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 438
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 40/235 (17%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW--- 402
F ++ + K+ H+ V L EE + +V EY G+L + + + ++L
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY---IVIEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 403 -GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI------ 455
M +IA GMAY +E M+ + H L ++ + + E+ K++D I
Sbjct: 117 VDMAAQIASGMAY-VERMNYV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEXT 170
Query: 456 ----AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
A + +V++FG+LL E+ T GR+PY +V+ L+
Sbjct: 171 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
Y P E E+L +L+ C R DPE+RPT + A L +
Sbjct: 231 GYRMPCPP--------------ECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 40/235 (17%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW--- 402
F ++ + K+ H+ V L EE + +V EY G+L + + + ++L
Sbjct: 60 FLQEAQVMKKIRHEKLVQLYAVVSEEPIY---IVTEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 403 -GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI------ 455
M +IA GMAY +E M+ + H L ++ + + E+ K++D I
Sbjct: 117 VDMAAQIASGMAY-VERMNYV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 456 ----AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
A + +V++FG+LL E+ T GR+PY +V+ L+
Sbjct: 171 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
Y P E E+L +L+ C R DPE+RPT + A L +
Sbjct: 231 GYRMPCPP--------------ECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 40/235 (17%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW--- 402
F ++ + K+ H+ V L EE + +V EY G+L + + + ++L
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY---IVIEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 403 -GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI------ 455
M +IA GMAY +E M+ + H L ++ + + E+ K++D I
Sbjct: 117 VDMAAQIASGMAY-VERMNYV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 456 ----AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
A + +V++FG+LL E+ T GR+PY +V+ L+
Sbjct: 171 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
Y P E E+L +L+ C R DPE+RPT + A L +
Sbjct: 231 GYRMPCPP--------------ECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 97/235 (41%), Gaps = 40/235 (17%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW--- 402
F ++ + K+ H+ V L EE + +V EY G L + + + ++L
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY---IVMEYMSKGCLLDFLKGEMGKYLRLPQL 116
Query: 403 -GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI------ 455
M +IA GMAY +E M+ + H L ++ + + E+ K++D I
Sbjct: 117 VDMAAQIASGMAY-VERMNYV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 456 ----AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
A + +V++FG+LL E+ T GR+PY +V+ L+
Sbjct: 171 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
Y P E E+L +L+ C R DPE+RPT + A L +
Sbjct: 231 GYRMPCPP--------------ECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 40/235 (17%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW--- 402
F ++ + K+ H+ V L EE + +V EY G+L + + + ++L
Sbjct: 49 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY---IVTEYMSKGSLLDFLKGEMGKYLRLPQL 105
Query: 403 -GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI------ 455
M +IA GMAY +E M+ + H L ++ + + E+ K++D I
Sbjct: 106 VDMAAQIASGMAY-VERMNYV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYT 159
Query: 456 ----AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
A + +V++FG+LL E+ T GR+PY +V+ L+
Sbjct: 160 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 219
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
Y P E E+L +L+ C R DPE+RPT + A L +
Sbjct: 220 GYRMPCPP--------------ECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 260
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 40/235 (17%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW--- 402
F ++ + K+ H+ V L EE + +V EY G+L + + + ++L
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY---IVCEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 403 -GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI------ 455
M +IA GMAY +E M+ + H L ++ + + E+ K++D I
Sbjct: 117 VDMAAQIASGMAY-VERMNYV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 456 ----AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
A + +V++FG+LL E+ T GR+PY +V+ L+
Sbjct: 171 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
Y P E E+L +L+ C R DPE+RPT + A L +
Sbjct: 231 GYRMPCPP--------------ECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 40/235 (17%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW--- 402
F ++ + K+ H+ V L EE + +V EY G+L + + + ++L
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY---IVTEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 403 -GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI------ 455
M +IA GMAY +E M+ + H L ++ + + E+ K++D I
Sbjct: 117 VDMAAQIASGMAY-VERMNYV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 456 ----AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
A + +V++FG+LL E+ T GR+PY +V+ L+
Sbjct: 171 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
Y P E E+L +L+ C R DPE+RPT + A L +
Sbjct: 231 GYRMPCPP--------------ECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 40/235 (17%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW--- 402
F ++ + K+ H+ V L EE + +V EY G+L + + + ++L
Sbjct: 51 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY---IVTEYMSKGSLLDFLKGEMGKYLRLPQL 107
Query: 403 -GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI------ 455
M +IA GMAY +E M+ + H L ++ + + E+ K++D I
Sbjct: 108 VDMAAQIASGMAY-VERMNYV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYT 161
Query: 456 ----AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
A + +V++FG+LL E+ T GR+PY +V+ L+
Sbjct: 162 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 221
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
Y P E E+L +L+ C R DPE+RPT + A L +
Sbjct: 222 GYRMPCPP--------------ECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 262
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 40/235 (17%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW--- 402
F ++ + K+ H+ V L EE + +V EY G+L + + + ++L
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY---IVTEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 403 -GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI------ 455
M +IA GMAY +E M+ + H L ++ + + E+ K++D I
Sbjct: 117 VDMAAQIASGMAY-VERMNYV-----HRDLAAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 456 ----AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
A + +V++FG+LL E+ T GR+PY +V+ L+
Sbjct: 171 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
Y P E E+L +L+ C R DPE+RPT + A L +
Sbjct: 231 GYRMPCPP--------------ECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 97/235 (41%), Gaps = 40/235 (17%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW--- 402
F ++ + K+ H+ V L EE + +V EY G L + + + ++L
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY---IVTEYMSKGCLLDFLKGEMGKYLRLPQL 116
Query: 403 -GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI------ 455
M +IA GMAY +E M+ + H L ++ + + E+ K++D I
Sbjct: 117 VDMAAQIASGMAY-VERMNYV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 456 ----AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
A + +V++FG+LL E+ T GR+PY +V+ L+
Sbjct: 171 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
Y P E E+L +L+ C R DPE+RPT + A L +
Sbjct: 231 GYRMPCPP--------------ECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 98/235 (41%), Gaps = 40/235 (17%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW--- 402
F ++ + K+ H+ V L EE + +V EY G+L + + + ++L
Sbjct: 309 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY---IVTEYMSKGSLLDFLKGETGKYLRLPQL 365
Query: 403 -GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI------ 455
M +IA GMAY +E M+ + H L ++ + + E+ K++D I
Sbjct: 366 VDMAAQIASGMAY-VERMNYV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYT 419
Query: 456 ----AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
A + +V++FG+LL E+ T GR+PY +V+ L+
Sbjct: 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 479
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
Y P E E+L +L+ C R +PE+RPT + A L +
Sbjct: 480 GYRMPCPP--------------ECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 520
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 98/235 (41%), Gaps = 40/235 (17%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW--- 402
F ++ + K+ H+ V L EE + +V EY G+L + + + ++L
Sbjct: 53 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY---IVTEYMSKGSLLDFLKGETGKYLRLPQL 109
Query: 403 -GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI------ 455
M +IA GMAY +E M+ + H L ++ + + E+ K++D I
Sbjct: 110 VDMAAQIASGMAY-VERMNYV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYT 163
Query: 456 ----AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
A + +V++FG+LL E+ T GR+PY +V+ L+
Sbjct: 164 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 223
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
Y P E E+L +L+ C R +PE+RPT + A L +
Sbjct: 224 GYRMPCPP--------------ECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 264
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 40/235 (17%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW--- 402
F ++ + K+ H+ V L EE + +V EY G+L + + + ++L
Sbjct: 57 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY---IVTEYMNKGSLLDFLKGETGKYLRLPQL 113
Query: 403 -GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF--------WN 453
M +IA GMAY +E M+ + H L ++ + + E+ K++D W
Sbjct: 114 VDMSAQIASGMAY-VERMNYV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEWT 167
Query: 454 EIAMAE--MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
A+ + +V++FG+LL E+ T GR+PY +V+ L+
Sbjct: 168 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
Y P E E+L +L+ C R +PE+RPT + A L +
Sbjct: 228 GYRMPCPP--------------ECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 98/235 (41%), Gaps = 40/235 (17%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW--- 402
F ++ + K+ H+ V L EE + +V EY G+L + + + ++L
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY---IVTEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 403 -GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI------ 455
M +IA GMAY +E M+ + H L ++ + + E+ K++D I
Sbjct: 283 VDMAAQIASGMAY-VERMNYV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336
Query: 456 ----AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
A + +V++FG+LL E+ T GR+PY +V+ L+
Sbjct: 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
Y P E E+L +L+ C R +PE+RPT + A L +
Sbjct: 397 GYRMPCPP--------------ECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 98/235 (41%), Gaps = 40/235 (17%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW--- 402
F ++ + K+ H+ V L EE + +V EY G+L + + + ++L
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY---IVTEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 403 -GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI------ 455
M +IA GMAY +E M+ + H L ++ + + E+ K++D I
Sbjct: 283 VDMAAQIASGMAY-VERMNYV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336
Query: 456 ----AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
A + +V++FG+LL E+ T GR+PY +V+ L+
Sbjct: 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
Y P E E+L +L+ C R +PE+RPT + A L +
Sbjct: 397 GYRMPCPP--------------ECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 98/235 (41%), Gaps = 40/235 (17%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW--- 402
F ++ + K+ H+ V L EE + +V EY G+L + + + ++L
Sbjct: 57 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY---IVTEYMNKGSLLDFLKGETGKYLRLPQL 113
Query: 403 -GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI------ 455
M +IA GMAY +E M+ + H L ++ + + E+ K++D I
Sbjct: 114 VDMSAQIASGMAY-VERMNYV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYT 167
Query: 456 ----AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
A + +V++FG+LL E+ T GR+PY +V+ L+
Sbjct: 168 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
Y P E E+L +L+ C R +PE+RPT + A L +
Sbjct: 228 GYRMPCPP--------------ECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 98/235 (41%), Gaps = 40/235 (17%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW--- 402
F ++ + K+ H+ V L EE + +V EY G+L + + + ++L
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY---IVGEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 403 -GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI------ 455
M +IA GMAY +E M+ + H L ++ + + E+ K++D I
Sbjct: 283 VDMAAQIASGMAY-VERMNYV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336
Query: 456 ----AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
A + +V++FG+LL E+ T GR+PY +V+ L+
Sbjct: 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
Y P E E+L +L+ C R +PE+RPT + A L +
Sbjct: 397 GYRMPCPP--------------ECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 40/235 (17%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW--- 402
F ++ + K+ H+ V L EE P +V EY G+L + + + ++L
Sbjct: 50 FLQEAQVMKKLRHEKLVQLYAVVSEE-PIX--IVTEYMSKGSLLDFLKGETGKYLRLPQL 106
Query: 403 -GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI------ 455
M +IA GMAY +E M+ + H L ++ + + E+ K++D I
Sbjct: 107 VDMAAQIASGMAY-VERMNYV-----HRDLRAANILVGENLVCKVADFGLARLIEDNEXT 160
Query: 456 ----AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
A + +V++FG+LL E+ T GR+PY +V+ L+
Sbjct: 161 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 220
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
Y P E E+L +L+ C R +PE+RPT + A L +
Sbjct: 221 GYRMPCPP--------------ECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 261
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 112/285 (39%), Gaps = 45/285 (15%)
Query: 302 FSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNF 361
F IGS G V+ G N ++ E F ++ + + K++H
Sbjct: 14 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS------EEDFIEEAEVMMKLSHPKL 67
Query: 362 VNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE----SEHLDWGMRLRIAMGMAYCLE 417
V L G C E+ P +VFE+ +G L +++ + +E L GM L + GMAY E
Sbjct: 68 VQLYGVCLEQAPIC--LVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEE 124
Query: 418 HMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXXXXXXXX--------- 468
+ H L + + E+ K+SD + +
Sbjct: 125 ------ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 178
Query: 469 -XXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS 526
+V++FGVL++E+ + G++PY +N S + D +G + P L+
Sbjct: 179 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPY--ENRSNSEVVEDISTGFR----LYKPRLA 232
Query: 527 SFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITPDG 571
S Q+ + C R PE RP + +LR++ I G
Sbjct: 233 STHVYQI------MNHCWRERPEDRPA---FSRLLRQLAEIAESG 268
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 96/230 (41%), Gaps = 33/230 (14%)
Query: 339 PKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI--HIKE 396
P +L+ FR+ + + +NH N V L E E+ T ++ EYA G +F+++ H +
Sbjct: 55 PTSLQKLFRE-VRIMKILNHPNIVKLFEVIETEK--TLYLIMEYASGGEVFDYLVAHGRM 111
Query: 397 SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 456
E +I + YC HQ I H L + + L D K++D F NE
Sbjct: 112 KEKEARSKFRQIVSAVQYC----HQ--KRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165
Query: 457 M---------AEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWA 507
+ A +V++ GV+L+ +V+G LP+ D +L++
Sbjct: 166 VGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF--DGQNLKELR 223
Query: 508 ADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
L G ++ P S D E L+K + +P KR T+ I
Sbjct: 224 ERVLRG-----KYRIPFYMSTDCEN------LLKRFLVLNPIKRGTLEQI 262
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 91/235 (38%), Gaps = 32/235 (13%)
Query: 356 VNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI--HIKESEHLDWGMRLRIAMGMA 413
+NH N V L E E+ T +V EYA G +F+++ H + E +I +
Sbjct: 70 LNHPNIVKLFEVIETEK--TLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQ 127
Query: 414 YCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM---------AEMXXXX 464
YC + I H L + + L D K++D F NE A
Sbjct: 128 YCHQKF------IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAP 181
Query: 465 XXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPT 524
+V++ GV+L+ +V+G LP+ D +L++ L G ++ P
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF--DGQNLKELRERVLRG-----KYRIPF 234
Query: 525 LSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAIPKLSPL 579
S D E L+K + +P KR T+ I G D P + PL
Sbjct: 235 YXSTDCEN------LLKKFLILNPSKRGTLEQIXKDRWXNVGHEDDELKPYVEPL 283
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 35/227 (15%)
Query: 345 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGM 404
+F K+ + ++ H N V L+G C E PF +V EY P G L +++ E + +
Sbjct: 74 EFLKEAAVMKEIKHPNLVQLLGVCTLEPPF--YIVTEYMPYGNLLDYLRECNREEVTAVV 131
Query: 405 RLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF--------WNEIA 456
L +A ++ +E++ + N H L + + E++ K++D + A
Sbjct: 132 LLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHA 189
Query: 457 MAE--MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSG 513
A+ + +V+ FGVLL+E+ T G PY G
Sbjct: 190 GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPY---------------PG 234
Query: 514 VQPLQQFVDPTLSSFDEEQLE----TLGELIKSCVRADPEKRPTMRD 556
+ L Q D + EQ E + EL+++C + P RP+ +
Sbjct: 235 ID-LSQVYDLLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAE 280
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 95/234 (40%), Gaps = 28/234 (11%)
Query: 348 KKIDTLSKVNHKNFVNLIG-FCEEEEPFTRMMVFEYAPNGTLFEHI-HIKESEHLDWGMR 405
K+ID L ++NH N + F E+ E +V E A G L I H K+ + L
Sbjct: 81 KEIDLLKQLNHPNVIKYYASFIEDNE---LNIVLELADAGDLSRMIKHFKKQKRLIPERT 137
Query: 406 L-RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLS---FWNEIAMAEMX 461
+ + + + LEHMH + H + + V +T KL DL F++ A
Sbjct: 138 VWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA-H 194
Query: 462 XXXXXXXXXXXXXXXXNVYNF-------GVLLFEMVTGRLPYLVDNGSLEDWAADYLSGV 514
N YNF G LL+EM + P+ D +L S
Sbjct: 195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-------YSLC 247
Query: 515 QPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 568
+ ++Q P L S + E L +L+ C+ DPEKRP + + + + + T
Sbjct: 248 KKIEQCDYPPLPS--DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 96/243 (39%), Gaps = 32/243 (13%)
Query: 348 KKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI--HIKESEHLDWGMR 405
+++ + +NH N V L E E+ T +V EYA G +F+++ H + E
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEK--TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 406 LRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEM----- 460
+I + YC HQ I H L + + L D K++D F NE
Sbjct: 120 RQIVSAVQYC----HQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC 173
Query: 461 ----XXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQP 516
+V++ GV+L+ +V+G LP+ D +L++ L G
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF--DGQNLKELRERVLRG--- 228
Query: 517 LQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAIPKL 576
++ P S D E L+K + +P KR T+ I G D P +
Sbjct: 229 --KYRIPFYMSTDCEN------LLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYV 280
Query: 577 SPL 579
+PL
Sbjct: 281 APL 283
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 118/281 (41%), Gaps = 47/281 (16%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ-FRKKIDTLSKVNHKNFVNL 364
+G+ G V+ G +N ++ P + VQ F ++ + + + H V L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK-------PGTMSVQAFLEEANLMKTLQHDKLVRL 72
Query: 365 IGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKES------EHLDWGMRLRIAMGMAYCLEH 418
+EEP ++ E+ G+L + + E + +D+ + IA GMAY +E
Sbjct: 73 YAVVTKEEPI--YIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQ--IAEGMAY-IER 127
Query: 419 MHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW-----NEIAMAE-----MXXXXXXXX 468
+ + H L ++ V ++E K++D NE E +
Sbjct: 128 KNYI-----HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI 182
Query: 469 XXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSS 527
NV++FG+LL+E+VT G++PY AD +S + Q + P + +
Sbjct: 183 NFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTN------ADVMSALS--QGYRMPRMEN 234
Query: 528 FDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 568
+E L +++K C + E+RPT + ++L + T
Sbjct: 235 CPDE----LYDIMKMCWKEKAEERPTFDYLQSVLDDFYTAT 271
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 96/243 (39%), Gaps = 32/243 (13%)
Query: 348 KKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI--HIKESEHLDWGMR 405
+++ + +NH N V L E E+ T +V EYA G +F+++ H + E
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEK--TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 406 LRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM-------- 457
+I + YC HQ I H L + + L D K++D F NE
Sbjct: 120 RQIVSAVQYC----HQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFC 173
Query: 458 -AEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQP 516
A +V++ GV+L+ +V+G LP+ D +L++ L G
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF--DGQNLKELRERVLRG--- 228
Query: 517 LQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAIPKL 576
++ P S D E L+K + +P KR T+ I G D P +
Sbjct: 229 --KYRIPFYMSTDCEN------LLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYV 280
Query: 577 SPL 579
PL
Sbjct: 281 EPL 283
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 95/230 (41%), Gaps = 33/230 (14%)
Query: 339 PKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI--HIKE 396
P +L+ FR+ + + +NH N V L E E+ T ++ EYA G +F+++ H +
Sbjct: 52 PTSLQKLFRE-VRIMKILNHPNIVKLFEVIETEK--TLYLIMEYASGGEVFDYLVAHGRM 108
Query: 397 SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 456
E +I + YC HQ I H L + + L D K++D F NE
Sbjct: 109 KEKEARSKFRQIVSAVQYC----HQ--KRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 162
Query: 457 MAEM---------XXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWA 507
+ +V++ GV+L+ +V+G LP+ D +L++
Sbjct: 163 VGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF--DGQNLKELR 220
Query: 508 ADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
L G ++ P S D E L+K + +P KR T+ I
Sbjct: 221 ERVLRG-----KYRIPFYMSTDCEN------LLKRFLVLNPIKRGTLEQI 259
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 345 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI----HIKESEHL 400
+ R++I L H + + L P MV EY G LF++I + E E
Sbjct: 62 KIRREIQNLKLFRHPHIIKLYQVIST--PSDIFMVMEYVSGGELFDYICKNGRLDEKE-- 117
Query: 401 DWGMRL--RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
RL +I G+ YC HM + H L V L AK++D N ++
Sbjct: 118 --SRRLFQQILSGVDYCHRHM------VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169
Query: 459 EM---------XXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAAD 509
E ++++ GV+L+ ++ G LP+ D+ +
Sbjct: 170 EFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF--DDDHVPTLFKK 227
Query: 510 YLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
G+ Q+++P++ S L+K ++ DP KR T++DI
Sbjct: 228 ICDGIFYTPQYLNPSVIS-----------LLKHMLQVDPMKRATIKDI 264
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 95/243 (39%), Gaps = 32/243 (13%)
Query: 348 KKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI--HIKESEHLDWGMR 405
+++ + +NH N V L E E+ T +V EYA G +F+++ H + E
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEK--TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 406 LRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEM----- 460
+I + YC HQ I H L + + L D K++D F NE
Sbjct: 120 RQIVSAVQYC----HQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC 173
Query: 461 ----XXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQP 516
+V++ GV+L+ +V+G LP+ D +L++ L G
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF--DGQNLKELRERVLRG--- 228
Query: 517 LQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAIPKL 576
++ P S D E L+K + +P KR T+ I G D P +
Sbjct: 229 --KYRIPFYMSTDCEN------LLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYV 280
Query: 577 SPL 579
PL
Sbjct: 281 EPL 283
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 95/243 (39%), Gaps = 32/243 (13%)
Query: 348 KKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI--HIKESEHLDWGMR 405
+++ + +NH N V L E E+ T +V EYA G +F+++ H + E
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEK--TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 406 LRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEM----- 460
+I + YC HQ I H L + + L D K++D F NE
Sbjct: 120 RQIVSAVQYC----HQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFC 173
Query: 461 ----XXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQP 516
+V++ GV+L+ +V+G LP+ D +L++ L G
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF--DGQNLKELRERVLRG--- 228
Query: 517 LQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAIPKL 576
++ P S D E L+K + +P KR T+ I G D P +
Sbjct: 229 --KYRIPFYMSTDCEN------LLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYV 280
Query: 577 SPL 579
PL
Sbjct: 281 EPL 283
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 95/243 (39%), Gaps = 32/243 (13%)
Query: 348 KKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI--HIKESEHLDWGMR 405
+++ + +NH N V L E E+ T +V EYA G +F+++ H + E
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEK--TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 406 LRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEM----- 460
+I + YC HQ I H L + + L D K++D F NE
Sbjct: 120 RQIVSAVQYC----HQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC 173
Query: 461 ----XXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQP 516
+V++ GV+L+ +V+G LP+ D +L++ L G
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF--DGQNLKELRERVLRG--- 228
Query: 517 LQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAIPKL 576
++ P S D E L+K + +P KR T+ I G D P +
Sbjct: 229 --KYRIPFYMSTDCEN------LLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYV 280
Query: 577 SPL 579
PL
Sbjct: 281 EPL 283
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 117/281 (41%), Gaps = 47/281 (16%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ-FRKKIDTLSKVNHKNFVNL 364
+G+ G V+ G +N ++ P + VQ F ++ + + + H V L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLK-------PGTMSVQAFLEEANLMKTLQHDKLVRL 73
Query: 365 IGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKES------EHLDWGMRLRIAMGMAYCLEH 418
EEP ++ EY G+L + + E + +D+ + IA GMAY +E
Sbjct: 74 YAVVTREEPI--YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQ--IAEGMAY-IER 128
Query: 419 MHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW-----NEIAMAE-----MXXXXXXXX 468
+ + H L ++ V ++E K++D NE E +
Sbjct: 129 KNYI-----HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI 183
Query: 469 XXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSS 527
+V++FG+LL+E+VT G++PY AD ++ + Q + P + +
Sbjct: 184 NFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTN------ADVMTALS--QGYRMPRVEN 235
Query: 528 FDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 568
+E L +++K C + E+RPT + ++L + T
Sbjct: 236 CPDE----LYDIMKMCWKEKAEERPTFDYLQSVLDDFYTAT 272
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 114/284 (40%), Gaps = 27/284 (9%)
Query: 293 SELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXK-DWPKNLEVQFRKKID 351
+E+ +C VIG+ G VYKG L K + + V F +
Sbjct: 39 TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAG 98
Query: 352 TLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW---GMRLRI 408
+ + +H N + L G + +P M++ EY NG L + + K+ E GM I
Sbjct: 99 IMGQFSHHNIIRLEGVISKYKPM--MIITEYMENGALDKFLREKDGEFSVLQLVGMLRGI 156
Query: 409 AMGMAYCLEHMHQLNPPIAHN--YLNSSAVHLTEDYAAK--LSD---LSFWNEIAMAEMX 461
A GM Y L +M+ ++ +A +NS+ V D+ L D ++ +
Sbjct: 157 AAGMKY-LANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR 215
Query: 462 XXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQF 520
+V++FG++++E++T G PY W LS + ++
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY---------WE---LSNHEVMKAI 263
Query: 521 VDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
D + + +L+ C + + +RP DI +IL ++
Sbjct: 264 NDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 111/285 (38%), Gaps = 45/285 (15%)
Query: 302 FSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNF 361
F IGS G V+ G N ++ E F ++ + + K++H
Sbjct: 12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS------EEDFIEEAEVMMKLSHPKL 65
Query: 362 VNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE----SEHLDWGMRLRIAMGMAYCLE 417
V L G C E+ P +V E+ +G L +++ + +E L GM L + GMAY E
Sbjct: 66 VQLYGVCLEQAPIC--LVTEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEE 122
Query: 418 HMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXXXXXXXX--------- 468
+ H L + + E+ K+SD + +
Sbjct: 123 ------ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 176
Query: 469 -XXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS 526
+V++FGVL++E+ + G++PY +N S + D +G + P L+
Sbjct: 177 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPY--ENRSNSEVVEDISTGFR----LYKPRLA 230
Query: 527 SFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITPDG 571
S Q+ + C R PE RP + +LR++ I G
Sbjct: 231 STHVYQI------MNHCWRERPEDRPA---FSRLLRQLAEIAESG 266
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 10/158 (6%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR 405
F + ++++ H N V L+G EE+ +V EY G+L +++ + L
Sbjct: 52 FLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL 110
Query: 406 LRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE------ 459
L+ ++ + +E++ N H L + V ++ED AK+SD E + +
Sbjct: 111 LKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP 168
Query: 460 MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY 496
+ +V++FG+LL+E+ + GR+PY
Sbjct: 169 VKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 10/158 (6%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR 405
F + ++++ H N V L+G EE+ +V EY G+L +++ + L
Sbjct: 61 FLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL 119
Query: 406 LRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE------ 459
L+ ++ + +E++ N H L + V ++ED AK+SD E + +
Sbjct: 120 LKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP 177
Query: 460 MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY 496
+ +V++FG+LL+E+ + GR+PY
Sbjct: 178 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 10/158 (6%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR 405
F + ++++ H N V L+G EE+ +V EY G+L +++ + L
Sbjct: 46 FLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL 104
Query: 406 LRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE------ 459
L+ ++ + +E++ N H L + V ++ED AK+SD E + +
Sbjct: 105 LKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP 162
Query: 460 MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY 496
+ +V++FG+LL+E+ + GR+PY
Sbjct: 163 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 10/158 (6%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR 405
F + ++++ H N V L+G EE+ +V EY G+L +++ + L
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL 291
Query: 406 LRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE------ 459
L+ ++ + +E++ N H L + V ++ED AK+SD E + +
Sbjct: 292 LKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP 349
Query: 460 MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY 496
+ +V++FG+LL+E+ + GR+PY
Sbjct: 350 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 22/186 (11%)
Query: 339 PKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI--HIKE 396
P +L+ FR+ + + +NH N V L E E+ T +V EYA G +F+++ H +
Sbjct: 55 PTSLQKLFRE-VRIMKILNHPNIVKLFEVIETEK--TLYLVMEYASGGEVFDYLVAHGRM 111
Query: 397 SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 456
E +I + YC HQ I H L + + L D K++D F NE
Sbjct: 112 KEKEARAKFRQIVSAVQYC----HQ--KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFT 165
Query: 457 MAEM---------XXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWA 507
+ +V++ GV+L+ +V+G LP+ D +L++
Sbjct: 166 VGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF--DGQNLKELR 223
Query: 508 ADYLSG 513
L G
Sbjct: 224 ERVLRG 229
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 98/249 (39%), Gaps = 37/249 (14%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR 405
F ++ LS+VNH N V L G C +V EYA G+L+ +H +E L +
Sbjct: 49 FIVELRQLSRVNHPNIVKLYGACLN----PVCLVMEYAEGGSLYNVLH--GAEPLPY--- 99
Query: 406 LRIAMGMAYCLE------HMHQLNP-PIAHNYLNSSAVHLTEDYAA-KLSDLSFWNEIAM 457
A M++CL+ ++H + P + H L + L K+ D +I
Sbjct: 100 YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 159
Query: 458 AEMXXXXXXXXXXXXXXXXXN------VYNFGVLLFEMVTGRLPYLVDNGSLED--WAAD 509
N V+++G++L+E++T R P+ G WA
Sbjct: 160 HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVH 219
Query: 510 YLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITP 569
+G +P P + + + + L+ C DP +RP+M +I I+ + P
Sbjct: 220 --NGTRP------PLIKNLP----KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 267
Query: 570 DGAIPKLSP 578
P P
Sbjct: 268 GADEPLQYP 276
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 94/243 (38%), Gaps = 32/243 (13%)
Query: 348 KKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI--HIKESEHLDWGMR 405
+++ + +NH N V L E E+ T +V EYA G +F+++ H E
Sbjct: 55 REVRIMKVLNHPNIVKLFEVIETEK--TLYLVMEYASGGEVFDYLVAHGWMKEKEARAKF 112
Query: 406 LRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEM----- 460
+I + YC HQ I H L + + L D K++D F NE
Sbjct: 113 RQIVSAVQYC----HQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC 166
Query: 461 ----XXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQP 516
+V++ GV+L+ +V+G LP+ D +L++ L G
Sbjct: 167 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF--DGQNLKELRERVLRG--- 221
Query: 517 LQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAIPKL 576
++ P S D E L+K + +P KR T+ I G D P +
Sbjct: 222 --KYRIPFYMSTDCEN------LLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYV 273
Query: 577 SPL 579
PL
Sbjct: 274 EPL 276
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 117/291 (40%), Gaps = 42/291 (14%)
Query: 283 FVTGVPKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNL 342
+ G P + E+E + +G G VY+G + +D +
Sbjct: 11 YFQGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED---TM 64
Query: 343 EVQ-FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLD 401
EV+ F K+ + ++ H N V L+G C E PF ++ E+ G L +++ + ++
Sbjct: 65 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVN 122
Query: 402 WGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF--------WN 453
+ L +A ++ +E++ + N H L + + E++ K++D +
Sbjct: 123 AVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 180
Query: 454 EIAMAE--MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADY 510
A A+ + +V+ FGVLL+E+ T G PY
Sbjct: 181 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY-------------- 226
Query: 511 LSGVQPLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDI 557
G+ L Q + + E+ E + EL+++C + +P RP+ +I
Sbjct: 227 -PGID-LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 106/274 (38%), Gaps = 44/274 (16%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ-FRKKIDTLSKVNHKNFVNL 364
+G+ G V+ GT + ++ P + + F ++ + K+ H V L
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLK-------PGTMSPESFLEEAQIMKKLKHDKLVQL 69
Query: 365 IGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW----GMRLRIAMGMAYCLEHMH 420
EE + +V EY G+L + + E L M ++A GMAY +E M+
Sbjct: 70 YAVVSEEPIY---IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAY-IERMN 125
Query: 421 QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI----------AMAEMXXXXXXXXXX 470
+ H L S+ + + K++D I A +
Sbjct: 126 YI-----HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALY 180
Query: 471 XXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFD 529
+V++FG+LL E+VT GR+PY N + L+Q
Sbjct: 181 GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR------------EVLEQVERGYRMPCP 228
Query: 530 EEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
++ +L EL+ C + DPE+RPT + + L +
Sbjct: 229 QDCPISLHELMIHCWKKDPEERPTFEYLQSFLED 262
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 98/249 (39%), Gaps = 37/249 (14%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR 405
F ++ LS+VNH N V L G C +V EYA G+L+ +H +E L +
Sbjct: 48 FIVELRQLSRVNHPNIVKLYGACLN----PVCLVMEYAEGGSLYNVLH--GAEPLPY--- 98
Query: 406 LRIAMGMAYCLE------HMHQLNP-PIAHNYLNSSAVHLTEDYAA-KLSDLSFWNEIAM 457
A M++CL+ ++H + P + H L + L K+ D +I
Sbjct: 99 YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158
Query: 458 AEMXXXXXXXXXXXXXXXXXN------VYNFGVLLFEMVTGRLPYLVDNGSLED--WAAD 509
N V+++G++L+E++T R P+ G WA
Sbjct: 159 HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVH 218
Query: 510 YLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITP 569
+G +P P + + + + L+ C DP +RP+M +I I+ + P
Sbjct: 219 --NGTRP------PLIKNLP----KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266
Query: 570 DGAIPKLSP 578
P P
Sbjct: 267 GADEPLQYP 275
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 112/290 (38%), Gaps = 49/290 (16%)
Query: 286 GVPKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ 345
G +LKR E+ E S G +G +KG V++ E +
Sbjct: 1 GHMELKREEITLLKELGSGQFGVVKLGK-WKGQYDVAVKMIKEGSMS----------EDE 49
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH-----IKESEHL 400
F ++ T+ K++H V G C +E P +V EY NG L ++ ++ S+ L
Sbjct: 50 FFQEAQTMMKLSHPKLVKFYGVCSKEYPI--YIVTEYISNGCLLNYLRSHGKGLEPSQLL 107
Query: 401 DWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEM 460
+ M + GMA+ H H L + + D K+SD + +
Sbjct: 108 E--MCYDVCEGMAFLESHQ------FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159
Query: 461 XXXXXXXX----------XXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAAD 509
+V+ FG+L++E+ + G++PY + S +
Sbjct: 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS------E 213
Query: 510 YLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 559
+ V + P L+S +T+ +++ SC PEKRPT + + +
Sbjct: 214 VVLKVSQGHRLYRPHLAS------DTIYQIMYSCWHELPEKRPTFQQLLS 257
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 119/294 (40%), Gaps = 43/294 (14%)
Query: 281 KAFVTGV-PKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWP 339
K V GV P + E+E + +G G VY+G + +D
Sbjct: 199 KPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED-- 253
Query: 340 KNLEVQ-FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESE 398
+EV+ F K+ + ++ H N V L+G C E PF ++ E+ G L +++ +
Sbjct: 254 -TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQ 310
Query: 399 HLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF------- 451
++ + L +A ++ +E++ + N H L + + E++ K++D
Sbjct: 311 EVNAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 368
Query: 452 -WNEIAMAE--MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWA 507
+ A A+ + +V+ FGVLL+E+ T G PY
Sbjct: 369 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------- 417
Query: 508 ADYLSGVQPLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDI 557
G+ L Q + + E+ E + EL+++C + +P RP+ +I
Sbjct: 418 ----PGID-LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 115/288 (39%), Gaps = 42/288 (14%)
Query: 286 GVPKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ 345
G P + E+E + +G G VY+G + +D +EV+
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED---TMEVE 54
Query: 346 -FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGM 404
F K+ + ++ H N V L+G C E PF ++ E+ G L +++ + + +
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVSAVV 112
Query: 405 RLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF--------WNEIA 456
L +A ++ +E++ + N H L + + E++ K++D + A
Sbjct: 113 LLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
Query: 457 MAE--MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSG 513
A+ + +V+ FGVLL+E+ T G PY G
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------------PG 215
Query: 514 VQPLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDI 557
+ L Q + + E+ E + EL+++C + +P RP+ +I
Sbjct: 216 ID-LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 115/288 (39%), Gaps = 42/288 (14%)
Query: 286 GVPKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ 345
G P + E+E + +G G VY+G + +D +EV+
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED---TMEVE 54
Query: 346 -FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGM 404
F K+ + ++ H N V L+G C E PF ++ E+ G L +++ + + +
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVSAVV 112
Query: 405 RLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF--------WNEIA 456
L +A ++ +E++ + N H L + + E++ K++D + A
Sbjct: 113 LLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
Query: 457 MAE--MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSG 513
A+ + +V+ FGVLL+E+ T G PY G
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------------PG 215
Query: 514 VQPLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDI 557
+ L Q + + E+ E + EL+++C + +P RP+ +I
Sbjct: 216 ID-LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 108/282 (38%), Gaps = 38/282 (13%)
Query: 294 ELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTL 353
E++ A +IG G VY+ G E+ +D + +E R++
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIE-NVRQEAKLF 60
Query: 354 SKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTL---FEHIHIKESEHLDWGMRLRIAM 410
+ + H N + L G C +E +V E+A G L I ++W ++IA
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLC--LVMEFARGGPLNRVLSGKRIPPDILVNWA--VQIAR 116
Query: 411 GMAYCLEHMHQLNPPIAHNYLNSSAVHLTE--------DYAAKLSDLSF---WNEI---- 455
GM Y + + PI H L SS + + + + K++D W+
Sbjct: 117 GMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMS 173
Query: 456 AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ 515
A +V+++GVLL+E++TG +P+ ++ A Y +
Sbjct: 174 AAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF----RGIDGLAVAYGVAMN 229
Query: 516 PLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
L + T E +L++ C DP RP+ +I
Sbjct: 230 KLALPIPSTCP-------EPFAKLMEDCWNPDPHSRPSFTNI 264
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 119/294 (40%), Gaps = 43/294 (14%)
Query: 281 KAFVTGV-PKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWP 339
K V GV P + E+E + +G G VY+G + +D
Sbjct: 241 KPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED-- 295
Query: 340 KNLEVQ-FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESE 398
+EV+ F K+ + ++ H N V L+G C E PF ++ E+ G L +++ +
Sbjct: 296 -TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQ 352
Query: 399 HLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF------- 451
++ + L +A ++ +E++ + N H L + + E++ K++D
Sbjct: 353 EVNAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 410
Query: 452 -WNEIAMAE--MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWA 507
+ A A+ + +V+ FGVLL+E+ T G PY
Sbjct: 411 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------- 459
Query: 508 ADYLSGVQPLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDI 557
G+ L Q + + E+ E + EL+++C + +P RP+ +I
Sbjct: 460 ----PGID-LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 112/284 (39%), Gaps = 42/284 (14%)
Query: 290 LKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ-FRK 348
L + E+E + +G G VY+G + +D +EV+ F K
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED---TMEVEEFLK 56
Query: 349 KIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRI 408
+ + ++ H N V L+G C E PF ++ E+ G L +++ + + + L +
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 409 AMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI----------AMA 458
A ++ +E++ + N H L + + E++ K++D + A
Sbjct: 115 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 172
Query: 459 EMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPL 517
+ +V+ FGVLL+E+ T G PY G+ P
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------------PGIDPS 217
Query: 518 QQF----VDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
Q + D + E E + EL+++C + +P RP+ +I
Sbjct: 218 QVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 115/288 (39%), Gaps = 42/288 (14%)
Query: 286 GVPKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ 345
G P + E+E + +G G VY+G + +D +EV+
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED---TMEVE 54
Query: 346 -FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGM 404
F K+ + ++ H N V L+G C E PF ++ E+ G L +++ + + +
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVV 112
Query: 405 RLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF--------WNEIA 456
L +A ++ +E++ + N H L + + E++ K++D + A
Sbjct: 113 LLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
Query: 457 MAE--MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSG 513
A+ + +V+ FGVLL+E+ T G PY G
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------------PG 215
Query: 514 VQPLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDI 557
+ L Q + + E+ E + EL+++C + +P RP+ +I
Sbjct: 216 ID-LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 115/288 (39%), Gaps = 42/288 (14%)
Query: 286 GVPKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ 345
G P + E+E + +G G VY+G + +D +EV+
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED---TMEVE 54
Query: 346 -FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGM 404
F K+ + ++ H N V L+G C E PF ++ E+ G L +++ + + +
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVV 112
Query: 405 RLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF--------WNEIA 456
L +A ++ +E++ + N H L + + E++ K++D + A
Sbjct: 113 LLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
Query: 457 MAE--MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSG 513
A+ + +V+ FGVLL+E+ T G PY G
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------------PG 215
Query: 514 VQPLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDI 557
+ L Q + + E+ E + EL+++C + +P RP+ +I
Sbjct: 216 ID-LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 115/306 (37%), Gaps = 56/306 (18%)
Query: 291 KRSELEAACEDFSNVIGSSPIGTVYKGTL---SNGVEIXXXXXXXXXXKDWPKNLEVQFR 347
K E+ + F +G G VYKG L + G + K L +FR
Sbjct: 2 KLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFR 60
Query: 348 KKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWG---- 403
+ +++ H N V L+G +++P + M+F Y +G L E + + S H D G
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLS--MIFSYCSHGDLHEFL-VMRSPHSDVGSTDD 117
Query: 404 ---------------MRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSD 448
+ +IA GM Y H + H L + V + + K+SD
Sbjct: 118 DRTVKSALEPPDFVHLVAQIAAGMEYLSSHH------VVHKDLATRNVLVYDKLNVKISD 171
Query: 449 LSFWNEIAMAE-----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY 496
L + E+ A+ + +++++GV+L+E+ + G PY
Sbjct: 172 LGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 231
Query: 497 LVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRD 556
+ D + ++ Q P ++ + L+ C P +RP +D
Sbjct: 232 CGYSNQ------DVVEMIRNRQVLPCP------DDCPAWVYALMIECWNEFPSRRPRFKD 279
Query: 557 IAAILR 562
I + LR
Sbjct: 280 IHSRLR 285
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 115/282 (40%), Gaps = 34/282 (12%)
Query: 290 LKRSELEAACEDFSNVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRK 348
LK +EL+ V+GS GTVYKG + G + + V+F
Sbjct: 35 LKETELKRV-----KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMD 89
Query: 349 KIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH-----IKESEHLDWG 403
+ ++ ++H + V L+G C T +V + P+G L E++H I L+W
Sbjct: 90 EALIMASMDHPHLVRLLGVCLSP---TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC 146
Query: 404 MRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVH--LTEDYAAKL--SDLSFWN-EIAMA 458
++IA GM Y E A N L S H +T+ A+L D +N +
Sbjct: 147 --VQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKM 204
Query: 459 EMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPL 517
+ +V+++GV ++E++T G PY +G D L + L
Sbjct: 205 PIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY---DGIPTREIPDLLEKGERL 261
Query: 518 QQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 559
Q P + + D + ++ C D + RP +++AA
Sbjct: 262 PQ---PPICTID------VYMVMVKCWMIDADSRPKFKELAA 294
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 115/306 (37%), Gaps = 56/306 (18%)
Query: 291 KRSELEAACEDFSNVIGSSPIGTVYKGTL---SNGVEIXXXXXXXXXXKDWPKNLEVQFR 347
K E+ + F +G G VYKG L + G + K L +FR
Sbjct: 19 KLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFR 77
Query: 348 KKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWG---- 403
+ +++ H N V L+G +++P + M+F Y +G L E + + S H D G
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLS--MIFSYCSHGDLHEFL-VMRSPHSDVGSTDD 134
Query: 404 ---------------MRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSD 448
+ +IA GM Y H + H L + V + + K+SD
Sbjct: 135 DRTVKSALEPPDFVHLVAQIAAGMEYLSSHH------VVHKDLATRNVLVYDKLNVKISD 188
Query: 449 LSFWNEIAMAE-----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY 496
L + E+ A+ + +++++GV+L+E+ + G PY
Sbjct: 189 LGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 248
Query: 497 LVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRD 556
+ D + ++ Q P ++ + L+ C P +RP +D
Sbjct: 249 CGYSNQ------DVVEMIRNRQVLPCP------DDCPAWVYALMIECWNEFPSRRPRFKD 296
Query: 557 IAAILR 562
I + LR
Sbjct: 297 IHSRLR 302
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 113/286 (39%), Gaps = 42/286 (14%)
Query: 288 PKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ-F 346
P + E+E + +G G VY+G + +D +EV+ F
Sbjct: 4 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED---TMEVEEF 57
Query: 347 RKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL 406
K+ + ++ H N V L+G C E PF ++ E+ G L +++ + ++ + L
Sbjct: 58 LKEAAVMKEIKHPNLVQLLGVCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVNAVVLL 115
Query: 407 RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI----------A 456
+A ++ +E++ + N H L + + E++ K++D + A
Sbjct: 116 YMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 173
Query: 457 MAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQ 515
+ +V+ FGVLL+E+ T G PY G+
Sbjct: 174 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------------PGID 218
Query: 516 PLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDI 557
L Q + + E+ E + EL+++C + +P RP+ +I
Sbjct: 219 -LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 118/294 (40%), Gaps = 43/294 (14%)
Query: 281 KAFVTGV-PKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWP 339
K + GV P + E+E + +G G VY+G + +D
Sbjct: 202 KPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED-- 256
Query: 340 KNLEVQ-FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESE 398
+EV+ F K+ + ++ H N V L+G C E PF ++ E+ G L +++ +
Sbjct: 257 -TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQ 313
Query: 399 HLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF------- 451
+ + L +A ++ +E++ + N H L + + E++ K++D
Sbjct: 314 EVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371
Query: 452 -WNEIAMAE--MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWA 507
+ A A+ + +V+ FGVLL+E+ T G PY
Sbjct: 372 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------- 420
Query: 508 ADYLSGVQPLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDI 557
G+ L Q + + E+ E + EL+++C + +P RP+ +I
Sbjct: 421 ----PGID-LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 469
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 115/286 (40%), Gaps = 42/286 (14%)
Query: 288 PKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ-F 346
P + E+E + +G G VY+G + +D +EV+ F
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED---TMEVEEF 61
Query: 347 RKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL 406
K+ + ++ H N V L+G C E PF ++ E+ G L +++ + ++ + L
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 407 RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF--------WNEIAMA 458
+A ++ +E++ + N H L + + E++ K++D + A A
Sbjct: 120 YMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 459 E--MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQ 515
+ + +V+ FGVLL+E+ T G PY G+
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------------PGID 222
Query: 516 PLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDI 557
L Q + + E+ E + EL+++C + +P RP+ +I
Sbjct: 223 -LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 115/282 (40%), Gaps = 34/282 (12%)
Query: 290 LKRSELEAACEDFSNVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRK 348
LK +EL+ V+GS GTVYKG + G + + V+F
Sbjct: 12 LKETELKRV-----KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMD 66
Query: 349 KIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH-----IKESEHLDWG 403
+ ++ ++H + V L+G C T +V + P+G L E++H I L+W
Sbjct: 67 EALIMASMDHPHLVRLLGVCLSP---TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC 123
Query: 404 MRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVH--LTEDYAAKL--SDLSFWN-EIAMA 458
++IA GM Y E A N L S H +T+ A+L D +N +
Sbjct: 124 --VQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKM 181
Query: 459 EMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPL 517
+ +V+++GV ++E++T G PY +G D L + L
Sbjct: 182 PIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY---DGIPTREIPDLLEKGERL 238
Query: 518 QQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 559
Q P + + D + ++ C D + RP +++AA
Sbjct: 239 PQ---PPICTID------VYMVMVKCWMIDADSRPKFKELAA 271
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 90/246 (36%), Gaps = 58/246 (23%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR----------- 405
HKN +NL+G C ++ P ++ EYA G L E++ +E L++
Sbjct: 92 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSS 149
Query: 406 -------LRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
++A GM Y + H L + V +TED K++D +I
Sbjct: 150 KDLVSCAYQVARGMEYL------ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 459 EMXXXXX-----------XXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDW 506
+ +V++FGVLL+E+ T G PY
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY---------- 253
Query: 507 AADYLSGVQPLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDIAAILR 562
GV P+++ ++ L +++ C A P +RPT + + L
Sbjct: 254 -----PGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 563 EITGIT 568
I +T
Sbjct: 308 RIVALT 313
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 111/284 (39%), Gaps = 42/284 (14%)
Query: 290 LKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ-FRK 348
L + E+E + +G G VY+G +D +EV+ F K
Sbjct: 3 LDKWEMERTDITMKHKLGGGQFGEVYEGVWKK---YSLTVAVKTLKED---TMEVEEFLK 56
Query: 349 KIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRI 408
+ + ++ H N V L+G C E PF ++ E+ G L +++ + + + L +
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 409 AMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI----------AMA 458
A ++ +E++ + N H L + + E++ K++D + A
Sbjct: 115 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 172
Query: 459 EMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPL 517
+ +V+ FGVLL+E+ T G PY G+ P
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------------PGIDPS 217
Query: 518 QQF----VDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
Q + D + E E + EL+++C + +P RP+ +I
Sbjct: 218 QVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 115/286 (40%), Gaps = 42/286 (14%)
Query: 288 PKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ-F 346
P + E+E + +G G VY+G + +D +EV+ F
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED---TMEVEEF 61
Query: 347 RKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL 406
K+ + ++ H N V L+G C E PF ++ E+ G L +++ + ++ + L
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 407 RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF--------WNEIAMA 458
+A ++ +E++ + N H L + + E++ K++D + A A
Sbjct: 120 YMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 459 E--MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQ 515
+ + +V+ FGVLL+E+ T G PY G+
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------------PGID 222
Query: 516 PLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDI 557
L Q + + E+ E + EL+++C + +P RP+ +I
Sbjct: 223 -LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 112/288 (38%), Gaps = 43/288 (14%)
Query: 302 FSNVIGSSPIGTVYKGTLS-NGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKV-NHK 359
F +VIG G V K + +G+ + K+ F +++ L K+ +H
Sbjct: 26 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS--KDDHRDFAGELEVLCKLGHHP 83
Query: 360 NFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE--------------SEHLDWGMR 405
N +NL+G CE + EYAP+G L + + + L
Sbjct: 84 NIINLLGACEHRGYL--YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 406 LRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSD--LSFWNEI----AMAE 459
L A +A ++++ Q H L + + + E+Y AK++D LS E+ M
Sbjct: 142 LHFAADVARGMDYLSQ--KQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR 199
Query: 460 MXXXXXXXXXXXXXXXXXN--VYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQP 516
+ N V+++GVLL+E+V+ G PY L P
Sbjct: 200 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC-------GMTCAELYEKLP 252
Query: 517 LQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
++ L+ DE + +L++ C R P +RP+ I L +
Sbjct: 253 QGYRLEKPLNCDDE-----VYDLMRQCWREKPYERPSFAQILVSLNRM 295
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 115/286 (40%), Gaps = 42/286 (14%)
Query: 288 PKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ-F 346
P + E+E + +G G VY+G + +D +EV+ F
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED---TMEVEEF 61
Query: 347 RKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL 406
K+ + ++ H N V L+G C E PF ++ E+ G L +++ + ++ + L
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 407 RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF--------WNEIAMA 458
+A ++ +E++ + N H L + + E++ K++D + A A
Sbjct: 120 YMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 459 E--MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQ 515
+ + +V+ FGVLL+E+ T G PY G+
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------------PGID 222
Query: 516 PLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDI 557
L Q + + E+ E + EL+++C + +P RP+ +I
Sbjct: 223 -LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 115/286 (40%), Gaps = 42/286 (14%)
Query: 288 PKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ-F 346
P + E+E + +G G VY+G + +D +EV+ F
Sbjct: 4 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED---TMEVEEF 57
Query: 347 RKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL 406
K+ + ++ H N V L+G C E PF ++ E+ G L +++ + ++ + L
Sbjct: 58 LKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLL 115
Query: 407 RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF--------WNEIAMA 458
+A ++ +E++ + N H L + + E++ K++D + A A
Sbjct: 116 YMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGA 173
Query: 459 E--MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQ 515
+ + +V+ FGVLL+E+ T G PY G+
Sbjct: 174 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------------PGID 218
Query: 516 PLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDI 557
L Q + + E+ E + EL+++C + +P RP+ +I
Sbjct: 219 -LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 115/286 (40%), Gaps = 42/286 (14%)
Query: 288 PKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ-F 346
P + E+E + +G G VY+G + +D +EV+ F
Sbjct: 7 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED---TMEVEEF 60
Query: 347 RKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL 406
K+ + ++ H N V L+G C E PF ++ E+ G L +++ + ++ + L
Sbjct: 61 LKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLL 118
Query: 407 RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF--------WNEIAMA 458
+A ++ +E++ + N H L + + E++ K++D + A A
Sbjct: 119 YMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 176
Query: 459 E--MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQ 515
+ + +V+ FGVLL+E+ T G PY G+
Sbjct: 177 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------------PGID 221
Query: 516 PLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDI 557
L Q + + E+ E + EL+++C + +P RP+ +I
Sbjct: 222 -LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 113/286 (39%), Gaps = 42/286 (14%)
Query: 288 PKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ-F 346
P + E+E + +G G VY+G + +D +EV+ F
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED---TMEVEEF 61
Query: 347 RKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL 406
K+ + ++ H N V L+G C E PF ++ E+ G L +++ + ++ + L
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 407 RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI----------A 456
+A ++ +E++ + N H L + + E++ K++D + A
Sbjct: 120 YMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 177
Query: 457 MAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQ 515
+ +V+ FGVLL+E+ T G PY G+
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------------PGID 222
Query: 516 PLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDI 557
L Q + + E+ E + EL+++C + +P RP+ +I
Sbjct: 223 -LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 115/286 (40%), Gaps = 42/286 (14%)
Query: 288 PKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ-F 346
P + E+E + +G G VY+G + +D +EV+ F
Sbjct: 5 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED---TMEVEEF 58
Query: 347 RKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL 406
K+ + ++ H N V L+G C E PF ++ E+ G L +++ + ++ + L
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLL 116
Query: 407 RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF--------WNEIAMA 458
+A ++ +E++ + N H L + + E++ K++D + A A
Sbjct: 117 YMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGA 174
Query: 459 E--MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQ 515
+ + +V+ FGVLL+E+ T G PY G+
Sbjct: 175 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------------PGID 219
Query: 516 PLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDI 557
L Q + + E+ E + EL+++C + +P RP+ +I
Sbjct: 220 -LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 115/286 (40%), Gaps = 42/286 (14%)
Query: 288 PKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ-F 346
P + E+E + +G G VY+G + +D +EV+ F
Sbjct: 3 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED---TMEVEEF 56
Query: 347 RKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL 406
K+ + ++ H N V L+G C E PF ++ E+ G L +++ + ++ + L
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLL 114
Query: 407 RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF--------WNEIAMA 458
+A ++ +E++ + N H L + + E++ K++D + A A
Sbjct: 115 YMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 459 E--MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQ 515
+ + +V+ FGVLL+E+ T G PY G+
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------------PGID 217
Query: 516 PLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDI 557
L Q + + E+ E + EL+++C + +P RP+ +I
Sbjct: 218 -LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 112/288 (38%), Gaps = 43/288 (14%)
Query: 302 FSNVIGSSPIGTVYKGTLS-NGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKV-NHK 359
F +VIG G V K + +G+ + K+ F +++ L K+ +H
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS--KDDHRDFAGELEVLCKLGHHP 86
Query: 360 NFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE--------------SEHLDWGMR 405
N +NL+G CE + EYAP+G L + + + L
Sbjct: 87 NIINLLGACEHRGYL--YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 406 LRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSD--LSFWNEI----AMAE 459
L A +A ++++ Q H L + + + E+Y AK++D LS E+ M
Sbjct: 145 LHFAADVARGMDYLSQ--KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR 202
Query: 460 MXXXXXXXXXXXXXXXXXN--VYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQP 516
+ N V+++GVLL+E+V+ G PY L P
Sbjct: 203 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC-------GMTCAELYEKLP 255
Query: 517 LQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
++ L+ DE + +L++ C R P +RP+ I L +
Sbjct: 256 QGYRLEKPLNCDDE-----VYDLMRQCWREKPYERPSFAQILVSLNRM 298
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 111/284 (39%), Gaps = 42/284 (14%)
Query: 290 LKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ-FRK 348
L + E+E + +G G VY+G +D +EV+ F K
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKK---YSLTVAVKTLKED---TMEVEEFLK 56
Query: 349 KIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRI 408
+ + ++ H N V L+G C E PF ++ E+ G L +++ + + + L +
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 409 AMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI----------AMA 458
A ++ +E++ + N H L + + E++ K++D + A
Sbjct: 115 ATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKF 172
Query: 459 EMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPL 517
+ +V+ FGVLL+E+ T G PY G+ P
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------------PGIDPS 217
Query: 518 QQF----VDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
Q + D + E E + EL+++C + +P RP+ +I
Sbjct: 218 QVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 115/286 (40%), Gaps = 42/286 (14%)
Query: 288 PKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ-F 346
P + E+E + +G G VY+G + +D +EV+ F
Sbjct: 3 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED---TMEVEEF 56
Query: 347 RKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL 406
K+ + ++ H N V L+G C E PF ++ E+ G L +++ + ++ + L
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLL 114
Query: 407 RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF--------WNEIAMA 458
+A ++ +E++ + N H L + + E++ K++D + A A
Sbjct: 115 YMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 459 E--MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQ 515
+ + +V+ FGVLL+E+ T G PY G+
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------------PGID 217
Query: 516 PLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDI 557
L Q + + E+ E + EL+++C + +P RP+ +I
Sbjct: 218 -LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 115/286 (40%), Gaps = 42/286 (14%)
Query: 288 PKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ-F 346
P + E+E + +G G VY+G + +D +EV+ F
Sbjct: 5 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED---TMEVEEF 58
Query: 347 RKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL 406
K+ + ++ H N V L+G C E PF ++ E+ G L +++ + ++ + L
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLL 116
Query: 407 RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF--------WNEIAMA 458
+A ++ +E++ + N H L + + E++ K++D + A A
Sbjct: 117 YMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 174
Query: 459 E--MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQ 515
+ + +V+ FGVLL+E+ T G PY G+
Sbjct: 175 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------------PGID 219
Query: 516 PLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDI 557
L Q + + E+ E + EL+++C + +P RP+ +I
Sbjct: 220 -LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 113/288 (39%), Gaps = 43/288 (14%)
Query: 302 FSNVIGSSPIGTVYKGTLS-NGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKV-NHK 359
F +VIG G V K + +G+ + K+ F +++ L K+ +H
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS--KDDHRDFAGELEVLCKLGHHP 76
Query: 360 NFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE--------------SEHLDWGMR 405
N +NL+G CE + EYAP+G L + + + L
Sbjct: 77 NIINLLGACEHRGYL--YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 406 LRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSD--LSFWNEIAMAE---- 459
L A +A ++++ Q H L + + + E+Y AK++D LS E+ + +
Sbjct: 135 LHFAADVARGMDYLSQ--KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR 192
Query: 460 --MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQP 516
+ +V+++GVLL+E+V+ G PY L P
Sbjct: 193 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC-------GMTCAELYEKLP 245
Query: 517 LQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
++ L+ DE + +L++ C R P +RP+ I L +
Sbjct: 246 QGYRLEKPLNCDDE-----VYDLMRQCWREKPYERPSFAQILVSLNRM 288
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 115/286 (40%), Gaps = 42/286 (14%)
Query: 288 PKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ-F 346
P + E+E + +G G VY+G + +D +EV+ F
Sbjct: 5 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED---TMEVEEF 58
Query: 347 RKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL 406
K+ + ++ H N V L+G C E PF ++ E+ G L +++ + ++ + L
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLL 116
Query: 407 RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF--------WNEIAMA 458
+A ++ +E++ + N H L + + E++ K++D + A A
Sbjct: 117 YMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 174
Query: 459 E--MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQ 515
+ + +V+ FGVLL+E+ T G PY G+
Sbjct: 175 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------------PGID 219
Query: 516 PLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDI 557
L Q + + E+ E + EL+++C + +P RP+ +I
Sbjct: 220 -LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 33/228 (14%)
Query: 341 NLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHL 400
++ ++ ++I L + H + + L P +MV EYA G LF++I K+
Sbjct: 51 DMHMRVEREISYLKLLRHPHIIKLYDVITT--PTDIVMVIEYA-GGELFDYIVEKKRMTE 107
Query: 401 DWGMRL--RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
D G R +I + YC H H+ I H L + L ++ K++D N +
Sbjct: 108 DEGRRFFQQIICAIEYC--HRHK----IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161
Query: 459 EMXXXX---------XXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAAD 509
+V++ G++L+ M+ GRLP+ D+ + +
Sbjct: 162 NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF--DDEFIPNLFKK 219
Query: 510 YLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
S V + F+ P S LI+ + ADP +R T+++I
Sbjct: 220 VNSCVYVMPDFLSPGAQS-----------LIRRMIVADPMQRITIQEI 256
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 114/286 (39%), Gaps = 42/286 (14%)
Query: 288 PKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ-F 346
P + E+E + +G G VY+G + +D +EV+ F
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK---KYSLTVAVKTLKED---TMEVEEF 61
Query: 347 RKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL 406
K+ + ++ H N V L+G C E PF ++ E+ G L +++ + + + L
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLL 119
Query: 407 RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF--------WNEIAMA 458
+A ++ +E++ + N H L + + E++ K++D + A A
Sbjct: 120 YMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 459 E--MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQ 515
+ + +V+ FGVLL+E+ T G PY G+
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------------PGID 222
Query: 516 PLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDI 557
L Q + + E+ E + EL+++C + +P RP+ +I
Sbjct: 223 -LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 107/286 (37%), Gaps = 50/286 (17%)
Query: 304 NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ----FRKKIDTLSKVNHK 359
VIG G VY G + + K + E+Q F ++ + +NH
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQ----NRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHP 82
Query: 360 NFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE-----SEHLDWGMRLRIAMGMAY 414
N + LIG E +++ Y +G L + I + + + +G L++A GM Y
Sbjct: 83 NVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTVKDLISFG--LQVARGMEY 139
Query: 415 CLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI-------------AMAEMX 461
E H L + L E + K++D +I A +
Sbjct: 140 LAEQK------FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVK 193
Query: 462 XXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYL-VDNGSLEDWAADYLSGVQPLQQ 519
+V++FGVLL+E++T G PY +D L + A QP
Sbjct: 194 WTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQP--- 250
Query: 520 FVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREIT 565
E ++L ++++ C ADP RPT R + + +I
Sbjct: 251 ----------EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV 286
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 89/246 (36%), Gaps = 58/246 (23%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR----------- 405
HKN +NL+G C ++ P ++ EYA G L E++ + L++
Sbjct: 85 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 142
Query: 406 -------LRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
++A GM Y + H L + V +TED K++D +I
Sbjct: 143 KDLVSCAYQVARGMEYL------ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 196
Query: 459 EMXXXXX-----------XXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDW 506
+ +V++FGVLL+E+ T G PY
Sbjct: 197 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY---------- 246
Query: 507 AADYLSGVQPLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDIAAILR 562
GV P+++ ++ L +++ C A P +RPT + + L
Sbjct: 247 -----PGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 300
Query: 563 EITGIT 568
I +T
Sbjct: 301 RIVALT 306
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 89/246 (36%), Gaps = 58/246 (23%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR----------- 405
HKN +NL+G C ++ P ++ EYA G L E++ + L++
Sbjct: 84 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 141
Query: 406 -------LRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
++A GM Y + H L + V +TED K++D +I
Sbjct: 142 KDLVSCAYQVARGMEYL------ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 195
Query: 459 EMXXXXX-----------XXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDW 506
+ +V++FGVLL+E+ T G PY
Sbjct: 196 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY---------- 245
Query: 507 AADYLSGVQPLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDIAAILR 562
GV P+++ ++ L +++ C A P +RPT + + L
Sbjct: 246 -----PGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 299
Query: 563 EITGIT 568
I +T
Sbjct: 300 RIVALT 305
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 106/282 (37%), Gaps = 40/282 (14%)
Query: 302 FSNVIGSSPIGTVYKGTL--SNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHK 359
F+ VIG G VY GTL ++G +I D + QF + + +H
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHP 90
Query: 360 NFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI----HIKESEHLDWGMRLRIAMGMAYC 415
N ++L+G C E + ++V Y +G L I H + L G L++A GM Y
Sbjct: 91 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 148
Query: 416 LEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI-------------AMAEMXX 462
+ H L + L E + K++D ++ A +
Sbjct: 149 ------ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKW 202
Query: 463 XXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVD 522
+V++FGVLL+E++T P D + D L G + LQ
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYC 261
Query: 523 PTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
P + L E++ C E RP+ ++ + + I
Sbjct: 262 P----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 89/246 (36%), Gaps = 58/246 (23%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR----------- 405
HKN +NL+G C ++ P ++ EYA G L E++ + L++
Sbjct: 92 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 149
Query: 406 -------LRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
++A GM Y + H L + V +TED K++D +I
Sbjct: 150 KDLVSCAYQVARGMEYL------ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 459 EMXXXXX-----------XXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDW 506
+ +V++FGVLL+E+ T G PY
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY---------- 253
Query: 507 AADYLSGVQPLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDIAAILR 562
GV P+++ ++ L +++ C A P +RPT + + L
Sbjct: 254 -----PGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 563 EITGIT 568
I +T
Sbjct: 308 RIVALT 313
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 109/290 (37%), Gaps = 36/290 (12%)
Query: 302 FSNVIGSSPIGTVYKGTLS--NGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHK 359
++G G+V +G L +G + + +E +F + + +H
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIE-EFLSEAACMKDFSHP 96
Query: 360 NFVNLIGFCEE------EEPFTRMMVFEYAPNGTLFEHIHIKES-EHLDWGMRLRIAMGM 412
N + L+G C E +P + +Y T + ++ +H+ L+ + +
Sbjct: 97 NVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDI 156
Query: 413 AYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLS---------FWNEIAMAEMXXX 463
A +E++ N H L + L +D ++D ++ + +A+M
Sbjct: 157 ALGMEYLSNRN--FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 464 --XXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQF 520
+V+ FGV ++E+ T G PY G DYL L+Q
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPY---PGVQNHEMYDYLLHGHRLKQ- 270
Query: 521 VDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITPD 570
E+ L+ L E++ SC R DP RPT + L ++ PD
Sbjct: 271 --------PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPD 312
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 89/246 (36%), Gaps = 58/246 (23%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR----------- 405
HKN +NL+G C ++ P ++ EYA G L E++ + L++
Sbjct: 81 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 138
Query: 406 -------LRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
++A GM Y + H L + V +TED K++D +I
Sbjct: 139 KDLVSCAYQVARGMEYL------ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 192
Query: 459 EMXXXXX-----------XXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDW 506
+ +V++FGVLL+E+ T G PY
Sbjct: 193 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY---------- 242
Query: 507 AADYLSGVQPLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDIAAILR 562
GV P+++ ++ L +++ C A P +RPT + + L
Sbjct: 243 -----PGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 296
Query: 563 EITGIT 568
I +T
Sbjct: 297 RIVALT 302
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 106/282 (37%), Gaps = 40/282 (14%)
Query: 302 FSNVIGSSPIGTVYKGTL--SNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHK 359
F+ VIG G VY GTL ++G +I D + QF + + +H
Sbjct: 53 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHP 110
Query: 360 NFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI----HIKESEHLDWGMRLRIAMGMAYC 415
N ++L+G C E + ++V Y +G L I H + L G L++A GM Y
Sbjct: 111 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 168
Query: 416 LEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI-------------AMAEMXX 462
+ H L + L E + K++D ++ A +
Sbjct: 169 ------ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 222
Query: 463 XXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVD 522
+V++FGVLL+E++T P D + D L G + LQ
Sbjct: 223 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYC 281
Query: 523 PTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
P + L E++ C E RP+ ++ + + I
Sbjct: 282 P----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 106/282 (37%), Gaps = 40/282 (14%)
Query: 302 FSNVIGSSPIGTVYKGTL--SNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHK 359
F+ VIG G VY GTL ++G +I D + QF + + +H
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHP 91
Query: 360 NFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI----HIKESEHLDWGMRLRIAMGMAYC 415
N ++L+G C E + ++V Y +G L I H + L G L++A GM Y
Sbjct: 92 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 149
Query: 416 LEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI-------------AMAEMXX 462
+ H L + L E + K++D ++ A +
Sbjct: 150 ------ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 463 XXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVD 522
+V++FGVLL+E++T P D + D L G + LQ
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYC 262
Query: 523 PTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
P + L E++ C E RP+ ++ + + I
Sbjct: 263 P----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 105/275 (38%), Gaps = 43/275 (15%)
Query: 302 FSNVIGSSPIGTVYKG-TLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKN 360
F IG TVYKG VE+ + K+ +F+++ + L + H N
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQD---RKLTKSERQRFKEEAEXLKGLQHPN 86
Query: 361 FVNLIGFCEEEEPFTR--MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYC--- 415
V E + ++V E +GTL +L +I + ++C
Sbjct: 87 IVRFYDSWESTVKGKKCIVLVTELXTSGTL--------KTYLKRFKVXKIKVLRSWCRQI 138
Query: 416 ---LEHMHQLNPPIAHNYLNSSAVHLTEDYAA-KLSDLSFWN------EIAMAEMXXXXX 465
L+ +H PPI H L + +T + K+ DL A+
Sbjct: 139 LKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXA 198
Query: 466 XXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADY---LSGVQPLQQFVD 522
+VY FG E T PY ++ A Y SGV+P
Sbjct: 199 PEXYEEKYDESVDVYAFGXCXLEXATSEYPY----SECQNAAQIYRRVTSGVKP------ 248
Query: 523 PTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+SFD+ + + E+I+ C+R + ++R +++D+
Sbjct: 249 ---ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL 280
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 106/282 (37%), Gaps = 40/282 (14%)
Query: 302 FSNVIGSSPIGTVYKGTL--SNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHK 359
F+ VIG G VY GTL ++G +I D + QF + + +H
Sbjct: 52 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHP 109
Query: 360 NFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI----HIKESEHLDWGMRLRIAMGMAYC 415
N ++L+G C E + ++V Y +G L I H + L G L++A GM Y
Sbjct: 110 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 167
Query: 416 LEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI-------------AMAEMXX 462
+ H L + L E + K++D ++ A +
Sbjct: 168 ------ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 221
Query: 463 XXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVD 522
+V++FGVLL+E++T P D + D L G + LQ
Sbjct: 222 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYC 280
Query: 523 PTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
P + L E++ C E RP+ ++ + + I
Sbjct: 281 P----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 90/246 (36%), Gaps = 58/246 (23%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR----------- 405
HKN +NL+G C ++ P ++ EYA G L E++ + L++
Sbjct: 92 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSS 149
Query: 406 -------LRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
++A GM Y + H L + V +TED K++D +I
Sbjct: 150 KDLVSCAYQVARGMEYL------ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 459 EMXXXXX-----------XXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDW 506
+ +V++FGVLL+E+ T G PY
Sbjct: 204 DXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY---------- 253
Query: 507 AADYLSGVQPLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDIAAILR 562
GV P+++ ++ L +++ C A P +RPT + + L
Sbjct: 254 -----PGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 563 EITGIT 568
I +T
Sbjct: 308 RIVALT 313
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 106/282 (37%), Gaps = 40/282 (14%)
Query: 302 FSNVIGSSPIGTVYKGTL--SNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHK 359
F+ VIG G VY GTL ++G +I D + QF + + +H
Sbjct: 26 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHP 83
Query: 360 NFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI----HIKESEHLDWGMRLRIAMGMAYC 415
N ++L+G C E + ++V Y +G L I H + L G L++A GM Y
Sbjct: 84 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 141
Query: 416 LEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI-------------AMAEMXX 462
+ H L + L E + K++D ++ A +
Sbjct: 142 ------ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 195
Query: 463 XXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVD 522
+V++FGVLL+E++T P D + D L G + LQ
Sbjct: 196 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYC 254
Query: 523 PTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
P + L E++ C E RP+ ++ + + I
Sbjct: 255 P----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 106/282 (37%), Gaps = 40/282 (14%)
Query: 302 FSNVIGSSPIGTVYKGTL--SNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHK 359
F+ VIG G VY GTL ++G +I D + QF + + +H
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHP 89
Query: 360 NFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI----HIKESEHLDWGMRLRIAMGMAYC 415
N ++L+G C E + ++V Y +G L I H + L G L++A GM Y
Sbjct: 90 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 147
Query: 416 LEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI-------------AMAEMXX 462
+ H L + L E + K++D ++ A +
Sbjct: 148 ------ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 201
Query: 463 XXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVD 522
+V++FGVLL+E++T P D + D L G + LQ
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYC 260
Query: 523 PTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
P + L E++ C E RP+ ++ + + I
Sbjct: 261 P----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 106/282 (37%), Gaps = 40/282 (14%)
Query: 302 FSNVIGSSPIGTVYKGTL--SNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHK 359
F+ VIG G VY GTL ++G +I D + QF + + +H
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHP 90
Query: 360 NFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI----HIKESEHLDWGMRLRIAMGMAYC 415
N ++L+G C E + ++V Y +G L I H + L G L++A GM Y
Sbjct: 91 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 148
Query: 416 LEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI-------------AMAEMXX 462
+ H L + L E + K++D ++ A +
Sbjct: 149 ------ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 202
Query: 463 XXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVD 522
+V++FGVLL+E++T P D + D L G + LQ
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYC 261
Query: 523 PTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
P + L E++ C E RP+ ++ + + I
Sbjct: 262 P----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 106/282 (37%), Gaps = 40/282 (14%)
Query: 302 FSNVIGSSPIGTVYKGTL--SNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHK 359
F+ VIG G VY GTL ++G +I D + QF + + +H
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHP 91
Query: 360 NFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI----HIKESEHLDWGMRLRIAMGMAYC 415
N ++L+G C E + ++V Y +G L I H + L G L++A GM Y
Sbjct: 92 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 149
Query: 416 LEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI-------------AMAEMXX 462
+ H L + L E + K++D ++ A +
Sbjct: 150 ------ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 463 XXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVD 522
+V++FGVLL+E++T P D + D L G + LQ
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYC 262
Query: 523 PTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
P + L E++ C E RP+ ++ + + I
Sbjct: 263 P----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 89/246 (36%), Gaps = 58/246 (23%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW-------------- 402
HKN +NL+G C ++ P ++ EYA G L E++ + L++
Sbjct: 77 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 134
Query: 403 ----GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
++A GM Y + H L + V +TED K++D +I
Sbjct: 135 KDLVSCAYQVARGMEYL------ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 188
Query: 459 EMXXXXX-----------XXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDW 506
+ +V++FGVLL+E+ T G PY
Sbjct: 189 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY---------- 238
Query: 507 AADYLSGVQPLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDIAAILR 562
GV P+++ ++ L +++ C A P +RPT + + L
Sbjct: 239 -----PGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 292
Query: 563 EITGIT 568
I +T
Sbjct: 293 RIVALT 298
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 88/224 (39%), Gaps = 32/224 (14%)
Query: 345 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI--HIKESEHLDW 402
+ +++I L H + + L F MV EY G LF++I H + E
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDF--FMVMEYVSGGELFDYICKHGRVEEMEAR 114
Query: 403 GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXX 462
+ +I + YC HM + H L V L AK++D N ++ E
Sbjct: 115 RLFQQILSAVDYCHRHM------VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR 168
Query: 463 XX---------XXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSG 513
++++ GV+L+ ++ G LP+ D+ + G
Sbjct: 169 TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF--DDEHVPTLFKKIRGG 226
Query: 514 VQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
V + ++++ ++++ L+ ++ DP KR T++DI
Sbjct: 227 VFYIPEYLNRSVAT-----------LLMHMLQVDPLKRATIKDI 259
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 106/282 (37%), Gaps = 40/282 (14%)
Query: 302 FSNVIGSSPIGTVYKGTL--SNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHK 359
F+ VIG G VY GTL ++G +I D + QF + + +H
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHP 88
Query: 360 NFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI----HIKESEHLDWGMRLRIAMGMAYC 415
N ++L+G C E + ++V Y +G L I H + L G L++A GM Y
Sbjct: 89 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 146
Query: 416 LEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI-------------AMAEMXX 462
+ H L + L E + K++D ++ A +
Sbjct: 147 ------ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 200
Query: 463 XXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVD 522
+V++FGVLL+E++T P D + D L G + LQ
Sbjct: 201 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYC 259
Query: 523 PTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
P + L E++ C E RP+ ++ + + I
Sbjct: 260 P----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 106/282 (37%), Gaps = 40/282 (14%)
Query: 302 FSNVIGSSPIGTVYKGTL--SNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHK 359
F+ VIG G VY GTL ++G +I D + QF + + +H
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHP 86
Query: 360 NFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI----HIKESEHLDWGMRLRIAMGMAYC 415
N ++L+G C E + ++V Y +G L I H + L G L++A GM Y
Sbjct: 87 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 144
Query: 416 LEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI-------------AMAEMXX 462
+ H L + L E + K++D ++ A +
Sbjct: 145 ------ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 198
Query: 463 XXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVD 522
+V++FGVLL+E++T P D + D L G + LQ
Sbjct: 199 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYC 257
Query: 523 PTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
P + L E++ C E RP+ ++ + + I
Sbjct: 258 P----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 89/246 (36%), Gaps = 58/246 (23%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW-------------- 402
HKN +NL+G C ++ P ++ EYA G L E++ + L++
Sbjct: 92 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 149
Query: 403 ----GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
++A GM Y + H L + V +TED K++D +I
Sbjct: 150 KDLVSCAYQVARGMEYL------ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 459 EMXXXXX-----------XXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDW 506
+ +V++FGVLL+E+ T G PY
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY---------- 253
Query: 507 AADYLSGVQPLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDIAAILR 562
GV P+++ ++ L +++ C A P +RPT + + L
Sbjct: 254 -----PGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 563 EITGIT 568
I +T
Sbjct: 308 RIVALT 313
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 88/224 (39%), Gaps = 32/224 (14%)
Query: 345 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI--HIKESEHLDW 402
+ +++I L H + + L F MV EY G LF++I H + E
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDF--FMVMEYVSGGELFDYICKHGRVEEMEAR 114
Query: 403 GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEM-- 460
+ +I + YC HM + H L V L AK++D N ++ E
Sbjct: 115 RLFQQILSAVDYCHRHM------VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR 168
Query: 461 -------XXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSG 513
++++ GV+L+ ++ G LP+ D+ + G
Sbjct: 169 DSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF--DDEHVPTLFKKIRGG 226
Query: 514 VQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
V + ++++ ++++ L+ ++ DP KR T++DI
Sbjct: 227 VFYIPEYLNRSVAT-----------LLMHMLQVDPLKRATIKDI 259
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 89/245 (36%), Gaps = 58/245 (23%)
Query: 358 HKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR------------ 405
HKN +NL+G C ++ P ++ EYA G L E++ + L++
Sbjct: 134 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 406 ------LRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE 459
++A GM Y + H L + V +TED K++D +I +
Sbjct: 192 DLVSCAYQVARGMEYL------ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 245
Query: 460 MXXXXX-----------XXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWA 507
+V++FGVLL+E+ T G PY
Sbjct: 246 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY----------- 294
Query: 508 ADYLSGVQPLQQFVDPTLSSFDEEQ----LETLGELIKSCVRADPEKRPTMRDIAAILRE 563
GV P+++ ++ L +++ C A P +RPT + + L
Sbjct: 295 ----PGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 349
Query: 564 ITGIT 568
I +T
Sbjct: 350 IVALT 354
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 40/240 (16%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH----IKESEHLD 401
F + + + ++ H+ V L +E + ++ EY NG+L + + IK + +
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKL 111
Query: 402 WGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE-- 459
M +IA GMA+ E + H L ++ + +++ + K++D I AE
Sbjct: 112 LDMAAQIAEGMAFIEERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXT 165
Query: 460 --------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
+ +V++FG+LL E+VT GR+PY + + +++
Sbjct: 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 568
Y + V P + E L +L++ C + PE RPT + ++L + T
Sbjct: 226 GY--------RMVRP------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 92/226 (40%), Gaps = 37/226 (16%)
Query: 347 RKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH------IKESEHL 400
R+++ L+ + H N V EE +V +Y G LF+ I+ +E + L
Sbjct: 71 RREVAVLANMKHPNIVQYRESFEENGSL--YIVMDYCEGGDLFKRINAQKGVLFQEDQIL 128
Query: 401 DWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWN------E 454
DW +++ +A L+H+H + I H + S + LT+D +L D E
Sbjct: 129 DWFVQICLA------LKHVH--DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE 180
Query: 455 IAMAEMXXXXXXXXXXXXXXXXXN---VYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYL 511
+A A + N ++ G +L+E+ T L + + GS+++ +
Sbjct: 181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT--LKHAFEAGSMKNLVLKII 238
Query: 512 SGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
SG P P + + L L+ + +P RP++ I
Sbjct: 239 SGSFP------PVSLHYSYD----LRSLVSQLFKRNPRDRPSVNSI 274
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 61/160 (38%), Gaps = 26/160 (16%)
Query: 305 VIGSSPIGTVYKGTLSN---GVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNF 361
+IG G VYKG+L V++ + K I + + H N
Sbjct: 20 LIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINE----------KNIYRVPLMEHDNI 69
Query: 362 VNLIGFCEEEEPFTRM---MVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEH 418
I E RM +V EY PNG+L +++ + S DW R+A + L +
Sbjct: 70 ARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS---DWVSSCRLAHSVTRGLAY 126
Query: 419 MH-------QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF 451
+H P I+H LNS V + D +SD
Sbjct: 127 LHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL 166
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 106/282 (37%), Gaps = 40/282 (14%)
Query: 302 FSNVIGSSPIGTVYKGTL--SNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHK 359
F+ VIG G VY GTL ++G +I D + QF + + +H
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHP 92
Query: 360 NFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI----HIKESEHLDWGMRLRIAMGMAYC 415
N ++L+G C E + ++V Y +G L I H + L G L++A GM +
Sbjct: 93 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 150
Query: 416 LEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI-------------AMAEMXX 462
+ H L + L E + K++D ++ A +
Sbjct: 151 ------ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKW 204
Query: 463 XXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVD 522
+V++FGVLL+E++T P D + D L G + LQ
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYC 263
Query: 523 PTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
P + L E++ C E RP+ ++ + + I
Sbjct: 264 P----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 106/282 (37%), Gaps = 40/282 (14%)
Query: 302 FSNVIGSSPIGTVYKGTL--SNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHK 359
F+ VIG G VY GTL ++G +I D + QF + + +H
Sbjct: 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHP 150
Query: 360 NFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI----HIKESEHLDWGMRLRIAMGMAYC 415
N ++L+G C E + ++V Y +G L I H + L G L++A GM +
Sbjct: 151 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 208
Query: 416 LEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI-------------AMAEMXX 462
+ H L + L E + K++D ++ A +
Sbjct: 209 ------ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 262
Query: 463 XXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVD 522
+V++FGVLL+E++T P D + D L G + LQ
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYC 321
Query: 523 PTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
P + L E++ C E RP+ ++ + + I
Sbjct: 322 P----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 106/282 (37%), Gaps = 40/282 (14%)
Query: 302 FSNVIGSSPIGTVYKGTL--SNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHK 359
F+ VIG G VY GTL ++G +I D + QF + + +H
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHP 91
Query: 360 NFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI----HIKESEHLDWGMRLRIAMGMAYC 415
N ++L+G C E + ++V Y +G L I H + L G L++A GM +
Sbjct: 92 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 149
Query: 416 LEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI-------------AMAEMXX 462
+ H L + L E + K++D ++ A +
Sbjct: 150 ------ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 463 XXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVD 522
+V++FGVLL+E++T P D + D L G + LQ
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYC 262
Query: 523 PTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
P + L E++ C E RP+ ++ + + I
Sbjct: 263 P----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 106/282 (37%), Gaps = 40/282 (14%)
Query: 302 FSNVIGSSPIGTVYKGTL--SNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHK 359
F+ VIG G VY GTL ++G +I D + QF + + +H
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHP 91
Query: 360 NFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI----HIKESEHLDWGMRLRIAMGMAYC 415
N ++L+G C E + ++V Y +G L I H + L G L++A GM +
Sbjct: 92 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 149
Query: 416 LEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI-------------AMAEMXX 462
+ H L + L E + K++D ++ A +
Sbjct: 150 ------ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 463 XXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVD 522
+V++FGVLL+E++T P D + D L G + LQ
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYC 262
Query: 523 PTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
P + L E++ C E RP+ ++ + + I
Sbjct: 263 P----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 105/282 (37%), Gaps = 40/282 (14%)
Query: 302 FSNVIGSSPIGTVYKGTL--SNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHK 359
F+ VIG G VY GTL ++G +I D + QF + + +H
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHP 92
Query: 360 NFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI----HIKESEHLDWGMRLRIAMGMAYC 415
N ++L+G C E + ++V Y +G L I H + L G L++A GM +
Sbjct: 93 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 150
Query: 416 LEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXX------------- 462
+ H L + L E + K++D ++ E
Sbjct: 151 ------ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 204
Query: 463 XXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVD 522
+V++FGVLL+E++T P D + D L G + LQ
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYC 263
Query: 523 PTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
P + L E++ C E RP+ ++ + + I
Sbjct: 264 P----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 106/282 (37%), Gaps = 40/282 (14%)
Query: 302 FSNVIGSSPIGTVYKGTL--SNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHK 359
F+ VIG G VY GTL ++G +I D + QF + + +H
Sbjct: 39 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHP 96
Query: 360 NFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI----HIKESEHLDWGMRLRIAMGMAYC 415
N ++L+G C E + ++V Y +G L I H + L G L++A GM +
Sbjct: 97 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 154
Query: 416 LEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI-------------AMAEMXX 462
+ H L + L E + K++D ++ A +
Sbjct: 155 ------ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 208
Query: 463 XXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVD 522
+V++FGVLL+E++T P D + D L G + LQ
Sbjct: 209 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYC 267
Query: 523 PTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
P + L E++ C E RP+ ++ + + I
Sbjct: 268 P----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 106/282 (37%), Gaps = 40/282 (14%)
Query: 302 FSNVIGSSPIGTVYKGTL--SNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHK 359
F+ VIG G VY GTL ++G +I D + QF + + +H
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--VSQFLTEGIIMKDFSHP 89
Query: 360 NFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI----HIKESEHLDWGMRLRIAMGMAYC 415
N ++L+G C E + ++V Y +G L I H + L G L++A GM +
Sbjct: 90 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 147
Query: 416 LEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI-------------AMAEMXX 462
+ H L + L E + K++D ++ A +
Sbjct: 148 ------ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 201
Query: 463 XXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVD 522
+V++FGVLL+E++T P D + D L G + LQ
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYC 260
Query: 523 PTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
P + L E++ C E RP+ ++ + + I
Sbjct: 261 P----------DPLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 40/240 (16%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH----IKESEHLD 401
F + + + ++ H+ V L +E + ++ EY NG+L + + IK + +
Sbjct: 51 FLAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKL 107
Query: 402 WGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW-----NEIA 456
M +IA GMA+ E + H L ++ + +++ + K++D NE
Sbjct: 108 LDMAAQIAEGMAFIEERNY------IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYT 161
Query: 457 MAE-----MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
E + +V++FG+LL E+VT GR+PY + + +++
Sbjct: 162 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 221
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 568
Y + V P + E L +L++ C + PE RPT + ++L + T
Sbjct: 222 GY--------RMVRP------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 267
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 40/240 (16%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH----IKESEHLD 401
F + + + ++ H+ V L +E + ++ EY NG+L + + IK + +
Sbjct: 63 FLAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKL 119
Query: 402 WGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW-----NEIA 456
M +IA GMA+ E + H L ++ + +++ + K++D NE
Sbjct: 120 LDMAAQIAEGMAFIEERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 173
Query: 457 MAE-----MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
E + +V++FG+LL E+VT GR+PY + + +++
Sbjct: 174 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 233
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 568
Y + V P + E L +L++ C + PE RPT + ++L + T
Sbjct: 234 GY--------RMVRP------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 279
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 40/240 (16%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH----IKESEHLD 401
F + + + ++ H+ V L +E + ++ EY NG+L + + IK + +
Sbjct: 61 FLAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKL 117
Query: 402 WGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW-----NEIA 456
M +IA GMA+ E + H L ++ + +++ + K++D NE
Sbjct: 118 LDMAAQIAEGMAFIEERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 171
Query: 457 MAE-----MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
E + +V++FG+LL E+VT GR+PY + + +++
Sbjct: 172 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 231
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 568
Y + V P + E L +L++ C + PE RPT + ++L + T
Sbjct: 232 GY--------RMVRP------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 277
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 40/240 (16%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH----IKESEHLD 401
F + + + ++ H+ V L +E + ++ EY NG+L + + IK + +
Sbjct: 57 FLAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKL 113
Query: 402 WGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW-----NEIA 456
M +IA GMA+ E + H L ++ + +++ + K++D NE
Sbjct: 114 LDMAAQIAEGMAFIEERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 167
Query: 457 MAE-----MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
E + +V++FG+LL E+VT GR+PY + + +++
Sbjct: 168 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 227
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 568
Y + V P + E L +L++ C + PE RPT + ++L + T
Sbjct: 228 GY--------RMVRP------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 273
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 40/240 (16%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH----IKESEHLD 401
F + + + ++ H+ V L +E + ++ EY NG+L + + IK + +
Sbjct: 61 FLAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKL 117
Query: 402 WGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW-----NEIA 456
M +IA GMA+ E + H L ++ + +++ + K++D NE
Sbjct: 118 LDMAAQIAEGMAFIEERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 171
Query: 457 MAE-----MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
E + +V++FG+LL E+VT GR+PY + + +++
Sbjct: 172 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 231
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 568
Y + V P + E L +L++ C + PE RPT + ++L + T
Sbjct: 232 GY--------RMVRP------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 277
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 40/240 (16%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH----IKESEHLD 401
F + + + ++ H+ V L +E + ++ EY NG+L + + IK + +
Sbjct: 60 FLAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKL 116
Query: 402 WGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW-----NEIA 456
M +IA GMA+ E + H L ++ + +++ + K++D NE
Sbjct: 117 LDMAAQIAEGMAFIEERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 170
Query: 457 MAE-----MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
E + +V++FG+LL E+VT GR+PY + + +++
Sbjct: 171 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 230
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 568
Y + V P + E L +L++ C + PE RPT + ++L + T
Sbjct: 231 GY--------RMVRP------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 276
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 103/247 (41%), Gaps = 40/247 (16%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH----IKESEHLD 401
F + + + ++ H+ V L +E + ++ EY NG+L + + IK + +
Sbjct: 65 FLAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKL 121
Query: 402 WGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW-----NEIA 456
M +IA GMA+ E + H L ++ + +++ + K++D NE
Sbjct: 122 LDMAAQIAEGMAFIEERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 175
Query: 457 MAE-----MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
E + +V++FG+LL E+VT GR+PY + + +++
Sbjct: 176 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 235
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 568
Y + V P + E L +L++ C + PE RPT + ++L + T
Sbjct: 236 GY--------RMVRP------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 281
Query: 569 PDGAIPK 575
P+
Sbjct: 282 EGQYQPQ 288
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 103/247 (41%), Gaps = 40/247 (16%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH----IKESEHLD 401
F + + + ++ H+ V L +E + ++ EY NG+L + + IK + +
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKL 111
Query: 402 WGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW-----NEIA 456
M +IA GMA+ E + H L ++ + +++ + K++D NE
Sbjct: 112 LDMAAQIAEGMAFIEERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 165
Query: 457 MAE-----MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
E + +V++FG+LL E+VT GR+PY + + +++
Sbjct: 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 568
Y + V P + E L +L++ C + PE RPT + ++L + T
Sbjct: 226 GY--------RMVRP------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271
Query: 569 PDGAIPK 575
P+
Sbjct: 272 EGQYQPQ 278
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 40/240 (16%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH----IKESEHLD 401
F + + + ++ H+ V L +E + ++ EY NG+L + + IK + +
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKL 111
Query: 402 WGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW-----NEIA 456
M +IA GMA+ E + H L ++ + +++ + K++D NE
Sbjct: 112 LDMAAQIAEGMAFIEERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 165
Query: 457 MAE-----MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
E + +V++FG+LL E+VT GR+PY + + +++
Sbjct: 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 568
Y + V P + E L +L++ C + PE RPT + ++L + T
Sbjct: 226 GY--------RMVRP------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 40/240 (16%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH----IKESEHLD 401
F + + + ++ H+ V L +E + ++ EY NG+L + + IK + +
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKL 111
Query: 402 WGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW-----NEIA 456
M +IA GMA+ E + H L ++ + +++ + K++D NE
Sbjct: 112 LDMAAQIAEGMAFIEERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 165
Query: 457 MAE-----MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
E + +V++FG+LL E+VT GR+PY + + +++
Sbjct: 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 568
Y + V P + E L +L++ C + PE RPT + ++L + T
Sbjct: 226 GY--------RMVRP------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 40/240 (16%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH----IKESEHLD 401
F + + + ++ H+ V L +E + ++ EY NG+L + + IK + +
Sbjct: 56 FLAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKL 112
Query: 402 WGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW-----NEIA 456
M +IA GMA+ E + H L ++ + +++ + K++D NE
Sbjct: 113 LDMAAQIAEGMAFIEERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 166
Query: 457 MAE-----MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
E + +V++FG+LL E+VT GR+PY + + +++
Sbjct: 167 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 226
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 568
Y + V P + E L +L++ C + PE RPT + ++L + T
Sbjct: 227 GY--------RMVRP------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 272
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 40/240 (16%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH----IKESEHLD 401
F + + + ++ H+ V L +E + ++ EY NG+L + + IK + +
Sbjct: 64 FLAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKL 120
Query: 402 WGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW-----NEIA 456
M +IA GMA+ E + H L ++ + +++ + K++D NE
Sbjct: 121 LDMAAQIAEGMAFIEERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 174
Query: 457 MAE-----MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
E + +V++FG+LL E+VT GR+PY + + +++
Sbjct: 175 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 234
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 568
Y + V P + E L +L++ C + PE RPT + ++L + T
Sbjct: 235 GY--------RMVRP------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 280
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 100/236 (42%), Gaps = 40/236 (16%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH----IKESEHLD 401
F + + + ++ H+ V L +E + ++ EY NG+L + + IK + +
Sbjct: 50 FLAEANLMKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKL 106
Query: 402 WGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW-----NEIA 456
M +IA GMA+ E + H L ++ + +++ + K++D NE
Sbjct: 107 LDMAAQIAEGMAFIEERNY------IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 160
Query: 457 MAE-----MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAA 508
E + +V++FG+LL E+VT GR+PY + + +++
Sbjct: 161 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 220
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 564
Y + V P + E L +L++ C + PE RPT + ++L +
Sbjct: 221 GY--------RMVRP------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 262
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 105/269 (39%), Gaps = 33/269 (12%)
Query: 304 NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKID---TLSKVNHKN 360
V+GS GTV+KG E +D K+ F+ D + ++H +
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIED--KSGRQSFQAVTDHMLAIGSLDHAH 76
Query: 361 FVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH-----IKESEHLDWGMRLRIAMGMAYC 415
V L+G C + +V +Y P G+L +H+ + L+WG ++IA GM Y
Sbjct: 77 IVRLLGLCPGS---SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG--VQIAKGMYYL 131
Query: 416 LEHMHQLNPPIAHNYL--NSSAVHLTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXX 470
EH A N L + S V + + A L D A +
Sbjct: 132 EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF 191
Query: 471 XXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFD 529
+V+++GV ++E++T G PY G D L + L Q P + + D
Sbjct: 192 GKYTHQSDVWSYGVTVWELMTFGAEPY---AGLRLAEVPDLLEKGERLAQ---PQICTID 245
Query: 530 EEQLETLGELIKSCVRADPEKRPTMRDIA 558
+ ++ C D RPT +++A
Sbjct: 246 ------VYMVMVKCWMIDENIRPTFKELA 268
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 101/268 (37%), Gaps = 27/268 (10%)
Query: 298 ACEDF--SNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSK 355
A EDF +G G VY N I + +E Q R++++ S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSH 64
Query: 356 VNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESEHLDWGMRLRIAMGM 412
+ H N + L G+ + TR+ ++ EYAP GT++ + K E +A +
Sbjct: 65 LRHPNILRLYGYFHDS---TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 413 AYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEIAMAEMXXXXXXXXX 469
+YC +H+ P N L SA L D+ + S +
Sbjct: 122 SYCHSKKVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIE 179
Query: 470 XXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFD 529
++++ GVL +E + G+ P+ + Q + + +F
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQDTYKRISRVEFTFP 226
Query: 530 EEQLETLGELIKSCVRADPEKRPTMRDI 557
+ E +LI ++ +P +RP +R++
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 105/269 (39%), Gaps = 33/269 (12%)
Query: 304 NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKID---TLSKVNHKN 360
V+GS GTV+KG E +D K+ F+ D + ++H +
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIED--KSGRQSFQAVTDHMLAIGSLDHAH 94
Query: 361 FVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH-----IKESEHLDWGMRLRIAMGMAYC 415
V L+G C + +V +Y P G+L +H+ + L+WG ++IA GM Y
Sbjct: 95 IVRLLGLCPGS---SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG--VQIAKGMYYL 149
Query: 416 LEHMHQLNPPIAHNYL--NSSAVHLTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXX 470
EH A N L + S V + + A L D A +
Sbjct: 150 EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF 209
Query: 471 XXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFD 529
+V+++GV ++E++T G PY G D L + L Q P + + D
Sbjct: 210 GKYTHQSDVWSYGVTVWELMTFGAEPY---AGLRLAEVPDLLEKGERLAQ---PQICTID 263
Query: 530 EEQLETLGELIKSCVRADPEKRPTMRDIA 558
+ ++ C D RPT +++A
Sbjct: 264 ------VYMVMVKCWMIDENIRPTFKELA 286
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 90/222 (40%), Gaps = 24/222 (10%)
Query: 342 LEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESE 398
+E Q R++++ S + H N + L G+ + TR+ ++ EYAP GT++ + K E
Sbjct: 52 VEHQLRREVEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDE 108
Query: 399 HLDWGMRLRIAMGMAYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEI 455
+A ++YC +H+ P N L SA L D+ + S +
Sbjct: 109 QRTATYITELANALSYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRDT 166
Query: 456 AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ 515
+ ++++ GVL +E + G+ P+ + Q
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQ 213
Query: 516 PLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+ + +F + E +LI ++ +P +RP +R++
Sbjct: 214 ETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 255
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 114/283 (40%), Gaps = 36/283 (12%)
Query: 290 LKRSELEAACEDFSNVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRK 348
LK +EL V+GS GTVYKG + +G + ++ +
Sbjct: 14 LKETELRKV-----KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILD 68
Query: 349 KIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWG 403
+ ++ V L+G C T +V + P G L +H+ + + L+W
Sbjct: 69 EAYVMAGVGSPYVSRLLGICLTS---TVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWC 125
Query: 404 MRLRIAMGMAYCLEHMHQLNPPI-AHNYLNSSAVH--LTEDYAAKLSDLS---FWNEIAM 457
M +IA GM+Y LE + ++ + A N L S H +T+ A+L D+ + +
Sbjct: 126 M--QIAKGMSY-LEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGK 182
Query: 458 AEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQP 516
+ +V+++GV ++E++T G PY +G D L +
Sbjct: 183 VPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPY---DGIPAREIPDLLEKGER 239
Query: 517 LQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 559
L Q P + + D + ++ C D E RP R++ +
Sbjct: 240 LPQ---PPICTID------VYMIMVKCWMIDSECRPRFRELVS 273
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 89/242 (36%), Gaps = 50/242 (20%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL---------- 406
HKN +NL+G C ++ P ++ EYA G L E++ + +++ +
Sbjct: 86 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 143
Query: 407 --------RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
++A GM Y H L + V +TE+ K++D +I
Sbjct: 144 KDLVSCTYQLARGMEYLASQ------KCIHRDLTARNVLVTENNVMKIADFGLARDINNI 197
Query: 459 EMXXXXX-----------XXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDW 506
+ +V++FGVL++E+ T G PY
Sbjct: 198 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY-------PGI 250
Query: 507 AADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 566
+ L + +D + +E L +++ C A P +RPT + + L I
Sbjct: 251 PVEELFKLLKEGHRMDKPANCTNE-----LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 305
Query: 567 IT 568
+T
Sbjct: 306 LT 307
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 90/231 (38%), Gaps = 43/231 (18%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLD----WGMRLR----- 407
H+N VNL+G C P +++ EY G L + K LD + LR
Sbjct: 100 QHENIVNLLGACTHGGPV--LVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 408 ---IAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI--------- 455
+A GMA+ + H + + V LT + AK+ D +I
Sbjct: 158 SSQVAQGMAFLA------SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 211
Query: 456 --AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLS 512
A + +V+++G+LL+E+ + G PY G L + + +
Sbjct: 212 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY---PGILVN--SKFYK 266
Query: 513 GVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
V+ Q P + + + ++++C +P RPT + I + L+E
Sbjct: 267 LVKDGYQMAQPAFAP------KNIYSIMQACWALEPTHRPTFQQICSFLQE 311
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 89/242 (36%), Gaps = 50/242 (20%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL---------- 406
HKN +NL+G C ++ P ++ EYA G L E++ + +++ +
Sbjct: 145 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 202
Query: 407 --------RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
++A GM Y H L + V +TE+ K++D +I
Sbjct: 203 KDLVSCTYQLARGMEYLASQK------CIHRDLAARNVLVTENNVMKIADFGLARDINNI 256
Query: 459 EMXXXXX-----------XXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDW 506
+ +V++FGVL++E+ T G PY
Sbjct: 257 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY-------PGI 309
Query: 507 AADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 566
+ L + +D + +E L +++ C A P +RPT + + L I
Sbjct: 310 PVEELFKLLKEGHRMDKPANCTNE-----LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364
Query: 567 IT 568
+T
Sbjct: 365 LT 366
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 27/273 (9%)
Query: 293 SELEAACEDF--SNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKI 350
S+ + A EDF +G G VY I + +E Q R+++
Sbjct: 5 SKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREV 63
Query: 351 DTLSKVNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESEHLDWGMRLR 407
+ S + H N + L G+ + TR+ ++ EYAP GT++ + K E
Sbjct: 64 EIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 120
Query: 408 IAMGMAYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEIAMAEMXXXX 464
+A ++YC +H+ P N L SA L D+ + S +
Sbjct: 121 LANALSYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 178
Query: 465 XXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPT 524
++++ GVL +E + G+ P+ + Q + +
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQETYKRISRV 225
Query: 525 LSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+F + E +LI ++ +P +RP +R++
Sbjct: 226 EFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 258
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 87/233 (37%), Gaps = 47/233 (20%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLD----WGMRLR----- 407
H+N VNL+G C P +++ EY G L + K LD + LR
Sbjct: 108 QHENIVNLLGACTHGGPV--LVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 408 ---IAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI--------- 455
+A GMA+ + H + + V LT + AK+ D +I
Sbjct: 166 SSQVAQGMAFLA------SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 219
Query: 456 --AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAADY 510
A + +V+++G+LL+E+ + G PY ++ N D
Sbjct: 220 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDG 279
Query: 511 LSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
QP F + S ++++C +P RPT + I + L+E
Sbjct: 280 YQMAQP--AFAPKNIYS-----------IMQACWALEPTHRPTFQQICSFLQE 319
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 91/222 (40%), Gaps = 24/222 (10%)
Query: 342 LEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESE 398
+E Q R++++ S + H N + L G+ + TR+ ++ EYAP GT++ + K E
Sbjct: 56 VEHQLRREVEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDE 112
Query: 399 HLDWGMRLRIAMGMAYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEI 455
+A ++YC +H+ P N L SA L D+ + S
Sbjct: 113 QRTATYITELANALSYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRTT 170
Query: 456 AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ 515
+ ++++ GVL +E + G+ P+ + Q
Sbjct: 171 LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQ 217
Query: 516 PLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+ + +F + E +LI ++ +P +RP +R++
Sbjct: 218 ETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPXLREV 259
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 89/222 (40%), Gaps = 24/222 (10%)
Query: 342 LEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESE 398
+E Q R++++ S + H N + L G+ + TR+ ++ EYAP GT++ + K E
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDE 107
Query: 399 HLDWGMRLRIAMGMAYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEI 455
+A ++YC +H+ P N L SA L D+ + S
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRTT 165
Query: 456 AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ 515
+ ++++ GVL +E + G+ P+ + Q
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQ 212
Query: 516 PLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+ + +F + E +LI ++ +P +RP +R++
Sbjct: 213 ETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 89/242 (36%), Gaps = 50/242 (20%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL---------- 406
HKN +NL+G C ++ P ++ EYA G L E++ + +++ +
Sbjct: 88 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 145
Query: 407 --------RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
++A GM Y H L + V +TE+ K++D +I
Sbjct: 146 KDLVSCTYQLARGMEYLASQ------KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 199
Query: 459 EMXXXXX-----------XXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDW 506
+ +V++FGVL++E+ T G PY
Sbjct: 200 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY-------PGI 252
Query: 507 AADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 566
+ L + +D + +E L +++ C A P +RPT + + L I
Sbjct: 253 PVEELFKLLKEGHRMDKPANCTNE-----LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 307
Query: 567 IT 568
+T
Sbjct: 308 LT 309
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 89/222 (40%), Gaps = 24/222 (10%)
Query: 342 LEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESE 398
+E Q R++++ S + H N + L G+ + TR+ ++ EYAP GT++ + K E
Sbjct: 54 VEHQLRREVEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDE 110
Query: 399 HLDWGMRLRIAMGMAYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEI 455
+A ++YC +H+ P N L SA L D+ + S
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRAA 168
Query: 456 AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ 515
+ ++++ GVL +E + G+ P+ + Q
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQ 215
Query: 516 PLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+ + +F + E +LI ++ +P +RP +R++
Sbjct: 216 ETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 89/222 (40%), Gaps = 24/222 (10%)
Query: 342 LEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESE 398
+E Q R++++ S + H N + L G+ + TR+ ++ EYAP GT++ + K E
Sbjct: 56 VEHQLRREVEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDE 112
Query: 399 HLDWGMRLRIAMGMAYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEI 455
+A ++YC +H+ P N L SA L D+ + S
Sbjct: 113 QRTATYITELANALSYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRTT 170
Query: 456 AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ 515
+ ++++ GVL +E + G+ P+ + Q
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQ 217
Query: 516 PLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+ + +F + E +LI ++ +P +RP +R++
Sbjct: 218 ETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 259
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 90/222 (40%), Gaps = 24/222 (10%)
Query: 342 LEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESE 398
+E Q R++++ S + H N + L G+ + TR+ ++ EYAP GT++ + K E
Sbjct: 77 VEHQLRREVEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDE 133
Query: 399 HLDWGMRLRIAMGMAYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEI 455
+A ++YC +H+ P N L SA L D+ + S +
Sbjct: 134 QRTATYITELANALSYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRDD 191
Query: 456 AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ 515
+ ++++ GVL +E + G+ P+ + Q
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQ 238
Query: 516 PLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+ + +F + E +LI ++ +P +RP +R++
Sbjct: 239 ETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 280
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 89/222 (40%), Gaps = 24/222 (10%)
Query: 342 LEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESE 398
+E Q R++++ S + H N + L G+ + TR+ ++ EYAP GT++ + K E
Sbjct: 77 VEHQLRREVEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDE 133
Query: 399 HLDWGMRLRIAMGMAYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEI 455
+A ++YC +H+ P N L SA L D+ + S
Sbjct: 134 QRTATYITELANALSYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRTT 191
Query: 456 AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ 515
+ ++++ GVL +E + G+ P+ + Q
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQ 238
Query: 516 PLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+ + +F + E +LI ++ +P +RP +R++
Sbjct: 239 ETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 280
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 90/242 (37%), Gaps = 50/242 (20%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL---------- 406
HKN +NL+G C ++ P ++ EYA G L E++ + +++ +
Sbjct: 99 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 407 --------RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
++A GM Y H L + V +TE+ K++D +I
Sbjct: 157 KDLVSCTYQLARGMEYLASQ------KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 459 EMXXXXX-----------XXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDW 506
+ +V++FGVL++E+ T G PY
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY-------PGI 263
Query: 507 AADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 566
+ L + +D + +E L +++ C A P +RPT + + L I
Sbjct: 264 PVEELFKLLKEGHRMDKPANCTNE-----LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 567 IT 568
+T
Sbjct: 319 LT 320
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 89/242 (36%), Gaps = 50/242 (20%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL---------- 406
HKN +NL+G C ++ P ++ EYA G L E++ + +++ +
Sbjct: 91 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 148
Query: 407 --------RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
++A GM Y H L + V +TE+ K++D +I
Sbjct: 149 KDLVSCTYQLARGMEYLASQ------KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 202
Query: 459 EMXXXXX-----------XXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDW 506
+ +V++FGVL++E+ T G PY
Sbjct: 203 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY-------PGI 255
Query: 507 AADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 566
+ L + +D + +E L +++ C A P +RPT + + L I
Sbjct: 256 PVEELFKLLKEGHRMDKPANCTNE-----LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 310
Query: 567 IT 568
+T
Sbjct: 311 LT 312
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 90/223 (40%), Gaps = 24/223 (10%)
Query: 341 NLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KES 397
+E Q R++++ S + H N + L G+ + TR+ ++ EYAP GT++ + K
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFD 109
Query: 398 EHLDWGMRLRIAMGMAYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNE 454
E +A ++YC +H+ P N L SA L D+ + S +
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRD 167
Query: 455 IAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGV 514
+ ++++ GVL +E + G+ P+ +
Sbjct: 168 DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------Y 214
Query: 515 QPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
Q + + +F + E +LI ++ +P +RP +R++
Sbjct: 215 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 89/222 (40%), Gaps = 24/222 (10%)
Query: 342 LEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESE 398
+E Q R++++ S + H N + L G+ + TR+ ++ EYAP GT++ + K E
Sbjct: 53 VEHQLRREVEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDE 109
Query: 399 HLDWGMRLRIAMGMAYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEI 455
+A ++YC +H+ P N L SA L D+ + S
Sbjct: 110 QRTATYITELANALSYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRXX 167
Query: 456 AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ 515
+ ++++ GVL +E + G+ P+ + Q
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQ 214
Query: 516 PLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+ + +F + E +LI ++ +P +RP +R++
Sbjct: 215 ETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 256
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 89/222 (40%), Gaps = 24/222 (10%)
Query: 342 LEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESE 398
+E Q R++++ S + H N + L G+ + TR+ ++ EYAP GT++ + K E
Sbjct: 54 VEHQLRREVEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDE 110
Query: 399 HLDWGMRLRIAMGMAYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEI 455
+A ++YC +H+ P N L SA L D+ + S
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRTT 168
Query: 456 AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ 515
+ ++++ GVL +E + G+ P+ + Q
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQ 215
Query: 516 PLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+ + +F + E +LI ++ +P +RP +R++
Sbjct: 216 ETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 100/268 (37%), Gaps = 27/268 (10%)
Query: 298 ACEDF--SNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSK 355
A EDF +G G VY I + +E Q R++++ S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSH 64
Query: 356 VNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESEHLDWGMRLRIAMGM 412
+ H N + L G+ + TR+ ++ EYAP GT++ + K E +A +
Sbjct: 65 LRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 413 AYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEIAMAEMXXXXXXXXX 469
+YC +H+ P N L SA L D+ + S +
Sbjct: 122 SYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIE 179
Query: 470 XXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFD 529
++++ GVL +E + G+ P+ + Q + + +F
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQETYKRISRVEFTFP 226
Query: 530 EEQLETLGELIKSCVRADPEKRPTMRDI 557
+ E +LI ++ +P +RP +R++
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 100/268 (37%), Gaps = 27/268 (10%)
Query: 298 ACEDF--SNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSK 355
A EDF +G G VY I + +E Q R++++ S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSH 64
Query: 356 VNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESEHLDWGMRLRIAMGM 412
+ H N + L G+ + TR+ ++ EYAP GT++ + K E +A +
Sbjct: 65 LRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 413 AYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEIAMAEMXXXXXXXXX 469
+YC +H+ P N L SA L D+ + S +
Sbjct: 122 SYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIE 179
Query: 470 XXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFD 529
++++ GVL +E + G+ P+ + Q + + +F
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQETYKRISRVEFTFP 226
Query: 530 EEQLETLGELIKSCVRADPEKRPTMRDI 557
+ E +LI ++ +P +RP +R++
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 89/242 (36%), Gaps = 50/242 (20%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL---------- 406
HKN +NL+G C ++ P ++ EYA G L E++ + +++ +
Sbjct: 99 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 407 --------RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI--- 455
++A GM Y H L + V +TE+ K++D +I
Sbjct: 157 KDLVSCTYQLARGMEYLASQ------KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 456 --------AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDW 506
+ +V++FGVL++E+ T G PY
Sbjct: 211 DYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY-------PGI 263
Query: 507 AADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 566
+ L + +D + +E L +++ C A P +RPT + + L I
Sbjct: 264 PVEELFKLLKEGHRMDKPANCTNE-----LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 567 IT 568
+T
Sbjct: 319 LT 320
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 100/268 (37%), Gaps = 27/268 (10%)
Query: 298 ACEDF--SNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSK 355
A EDF +G G VY I + +E Q R++++ S
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSH 63
Query: 356 VNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESEHLDWGMRLRIAMGM 412
+ H N + L G+ + TR+ ++ EYAP GT++ + K E +A +
Sbjct: 64 LRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 120
Query: 413 AYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEIAMAEMXXXXXXXXX 469
+YC +H+ P N L SA L D+ + S +
Sbjct: 121 SYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIE 178
Query: 470 XXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFD 529
++++ GVL +E + G+ P+ + Q + + +F
Sbjct: 179 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQETYKRISRVEFTFP 225
Query: 530 EEQLETLGELIKSCVRADPEKRPTMRDI 557
+ E +LI ++ +P +RP +R++
Sbjct: 226 DFVTEGARDLISRLLKHNPSQRPMLREV 253
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 89/242 (36%), Gaps = 50/242 (20%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL---------- 406
HKN +NL+G C ++ P ++ EYA G L E++ + +++ +
Sbjct: 99 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 407 --------RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
++A GM Y H L + V +TE+ K++D +I
Sbjct: 157 KDLVSCTYQLARGMEYLASQ------KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 459 EMXXXXX-----------XXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDW 506
+ +V++FGVL++E+ T G PY
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY-------PGI 263
Query: 507 AADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 566
+ L + +D + +E L +++ C A P +RPT + + L I
Sbjct: 264 PVEELFKLLKEGHRMDKPANCTNE-----LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 567 IT 568
+T
Sbjct: 319 LT 320
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 89/222 (40%), Gaps = 24/222 (10%)
Query: 342 LEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESE 398
+E Q R++++ S + H N + L G+ + TR+ ++ EYAP GT++ + K E
Sbjct: 68 VEHQLRREVEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDE 124
Query: 399 HLDWGMRLRIAMGMAYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEI 455
+A ++YC +H+ P N L SA L D+ + S
Sbjct: 125 QRTATYITELANALSYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRTT 182
Query: 456 AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ 515
+ ++++ GVL +E + G+ P+ + Q
Sbjct: 183 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQ 229
Query: 516 PLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+ + +F + E +LI ++ +P +RP +R++
Sbjct: 230 ETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 271
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 89/223 (39%), Gaps = 24/223 (10%)
Query: 341 NLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KES 397
+E Q R++++ S + H N + L G+ + TR+ ++ EYAP GT++ + K
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 398 EHLDWGMRLRIAMGMAYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNE 454
E +A ++YC +H+ P N L SA L D+ + S
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRT 164
Query: 455 IAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGV 514
+ ++++ GVL +E + G+ P+ +
Sbjct: 165 XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------Y 211
Query: 515 QPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
Q + + +F + E +LI ++ +P +RP +R++
Sbjct: 212 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 100/268 (37%), Gaps = 27/268 (10%)
Query: 298 ACEDF--SNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSK 355
A EDF +G G VY I + +E Q R++++ S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSH 67
Query: 356 VNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESEHLDWGMRLRIAMGM 412
+ H N + L G+ + TR+ ++ EYAP GT++ + K E +A +
Sbjct: 68 LRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 413 AYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEIAMAEMXXXXXXXXX 469
+YC +H+ P N L SA L D+ + S +
Sbjct: 125 SYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIE 182
Query: 470 XXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFD 529
++++ GVL +E + G+ P+ + Q + + +F
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQETYKRISRVEFTFP 229
Query: 530 EEQLETLGELIKSCVRADPEKRPTMRDI 557
+ E +LI ++ +P +RP +R++
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 89/223 (39%), Gaps = 24/223 (10%)
Query: 341 NLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KES 397
+E Q R++++ S + H N + L G+ + TR+ ++ EYAP GT++ + K
Sbjct: 47 GVEHQLRREVEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFD 103
Query: 398 EHLDWGMRLRIAMGMAYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNE 454
E +A ++YC +H+ P N L SA L D+ + S
Sbjct: 104 EQRTATYITELANALSYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRT 161
Query: 455 IAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGV 514
+ ++++ GVL +E + G+ P+ +
Sbjct: 162 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------Y 208
Query: 515 QPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
Q + + +F + E +LI ++ +P +RP +R++
Sbjct: 209 QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 251
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 100/268 (37%), Gaps = 27/268 (10%)
Query: 298 ACEDF--SNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSK 355
A EDF +G G VY I + +E Q R++++ S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSH 67
Query: 356 VNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESEHLDWGMRLRIAMGM 412
+ H N + L G+ + TR+ ++ EYAP GT++ + K E +A +
Sbjct: 68 LRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 413 AYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEIAMAEMXXXXXXXXX 469
+YC +H+ P N L SA L D+ + S +
Sbjct: 125 SYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIE 182
Query: 470 XXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFD 529
++++ GVL +E + G+ P+ + Q + + +F
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQETYKRISRVEFTFP 229
Query: 530 EEQLETLGELIKSCVRADPEKRPTMRDI 557
+ E +LI ++ +P +RP +R++
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 77/213 (36%), Gaps = 40/213 (18%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
IG G V+ G L + + P +L+ +F ++ L + +H N V LI
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCR---ETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 366 GFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRI----------AMGMAYC 415
G C +++P +V E G + + G RLR+ A GM Y
Sbjct: 179 GVCTQKQPI--YIVMELVQGGDFLTFLRTE-------GARLRVKTLLQMVGDAAAGMEY- 228
Query: 416 LEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA-----------MAEMXXXX 464
LE + H L + +TE K+SD E A +
Sbjct: 229 LE-----SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTA 283
Query: 465 XXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY 496
+V++FG+LL+E + G PY
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWETFSLGASPY 316
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 104/271 (38%), Gaps = 38/271 (14%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ-FRKKIDTLSKVNHKNFVNL 364
+G+ G V+ T + ++ P ++ V+ F + + + + H V L
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMK-------PGSMSVEAFLAEANVMKTLQHDKLVKL 242
Query: 365 IGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH------LDWGMRLRIAMGMAYCLEH 418
+E + ++ E+ G+L + + E +D+ + IA GMA+
Sbjct: 243 HAVVTKEPIY---IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ--IAEGMAF---- 293
Query: 419 MHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXXXXXXXXXXXXXXXXXN 478
+ Q N H L ++ + ++ K++D A + +
Sbjct: 294 IEQRN--YIHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTAPEAINFGSFTIKSD 351
Query: 479 VYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLETLG 537
V++FG+LL E+VT GR+PY +S + ++ E E L
Sbjct: 352 VWSFGILLMEIVTYGRIPY------------PGMSNPEVIRALERGYRMPRPENCPEELY 399
Query: 538 ELIKSCVRADPEKRPTMRDIAAILREITGIT 568
++ C + PE+RPT I ++L + T
Sbjct: 400 NIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 430
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 89/222 (40%), Gaps = 24/222 (10%)
Query: 342 LEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESE 398
+E Q R++++ S + H N + L G+ + TR+ ++ EYAP GT++ + K E
Sbjct: 52 VEHQLRREVEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDE 108
Query: 399 HLDWGMRLRIAMGMAYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEI 455
+A ++YC +H+ P N L SA L D+ + S
Sbjct: 109 QRTATYITELANALSYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRTD 166
Query: 456 AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ 515
+ ++++ GVL +E + G+ P+ + Q
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQ 213
Query: 516 PLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+ + +F + E +LI ++ +P +RP +R++
Sbjct: 214 ETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 255
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 89/222 (40%), Gaps = 24/222 (10%)
Query: 342 LEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESE 398
+E Q R++++ S + H N + L G+ + TR+ ++ EYAP GT++ + K E
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDE 107
Query: 399 HLDWGMRLRIAMGMAYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEI 455
+A ++YC +H+ P N L SA L D+ + S
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRTE 165
Query: 456 AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ 515
+ ++++ GVL +E + G+ P+ + Q
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQ 212
Query: 516 PLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+ + +F + E +LI ++ +P +RP +R++
Sbjct: 213 ETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 88/222 (39%), Gaps = 24/222 (10%)
Query: 342 LEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESE 398
+E Q R++++ S + H N + L G+ + TR+ ++ EYAP GT++ + K E
Sbjct: 52 VEHQLRREVEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDE 108
Query: 399 HLDWGMRLRIAMGMAYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEI 455
+A ++YC +H+ P N L SA L D+ S
Sbjct: 109 QRTATYITELANALSYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSCHAPSSRRTT 166
Query: 456 AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ 515
+ ++++ GVL +E + G+ P+ + Q
Sbjct: 167 LSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQ 213
Query: 516 PLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+ + +F + E +LI ++ +P +RP +R++
Sbjct: 214 ETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 255
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 77/213 (36%), Gaps = 40/213 (18%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
IG G V+ G L + + P +L+ +F ++ L + +H N V LI
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCR---ETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 366 GFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRI----------AMGMAYC 415
G C +++P +V E G + + G RLR+ A GM Y
Sbjct: 179 GVCTQKQPI--YIVMELVQGGDFLTFLRTE-------GARLRVKTLLQMVGDAAAGMEY- 228
Query: 416 LEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA-----------MAEMXXXX 464
LE + H L + +TE K+SD E A +
Sbjct: 229 LE-----SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTA 283
Query: 465 XXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY 496
+V++FG+LL+E + G PY
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWETFSLGASPY 316
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 89/222 (40%), Gaps = 24/222 (10%)
Query: 342 LEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESE 398
+E Q R++++ S + H N + L G+ + TR+ ++ EYAP GT++ + K E
Sbjct: 56 VEHQLRREVEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDE 112
Query: 399 HLDWGMRLRIAMGMAYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEI 455
+A ++YC +H+ P N L SA L D+ + S
Sbjct: 113 QRTATYITELANALSYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRTD 170
Query: 456 AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ 515
+ ++++ GVL +E + G+ P+ + Q
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQ 217
Query: 516 PLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+ + +F + E +LI ++ +P +RP +R++
Sbjct: 218 ETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 259
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 83/213 (38%), Gaps = 12/213 (5%)
Query: 294 ELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTL 353
E+EA+C VIG+ G V G L + + + F + +
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIM 77
Query: 354 SKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW---GMRLRIAM 410
+ +H N ++L G + +P M+V EY NG+L + + + GM I+
Sbjct: 78 GQFDHPNIIHLEGVVTKSKPV--MIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISA 135
Query: 411 GMAYCLEHMHQLNPPIAHNYL-NSSAVHLTEDYAAK--LSD---LSFWNEIAMAEMXXXX 464
GM Y + + A N L NS+ V D+ L D ++ +
Sbjct: 136 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTA 195
Query: 465 XXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY 496
+V+++G++++E+V+ G PY
Sbjct: 196 PEAIAFRKFTSASDVWSYGIVMWEVVSYGERPY 228
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 89/242 (36%), Gaps = 50/242 (20%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL---------- 406
HKN +NL+G C ++ P ++ EYA G L E++ + +++ +
Sbjct: 99 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 407 --------RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
++A GM Y H L + V +TE+ +++D +I
Sbjct: 157 KDLVSCTYQLARGMEYLASQ------KCIHRDLAARNVLVTENNVMRIADFGLARDINNI 210
Query: 459 EMXXXXX-----------XXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDW 506
+ +V++FGVL++E+ T G PY
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY-------PGI 263
Query: 507 AADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 566
+ L + +D + +E L +++ C A P +RPT + + L I
Sbjct: 264 PVEELFKLLKEGHRMDKPANCTNE-----LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 567 IT 568
+T
Sbjct: 319 LT 320
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 89/222 (40%), Gaps = 24/222 (10%)
Query: 342 LEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESE 398
+E Q R++++ S + H N + L G+ + TR+ ++ EYAP GT++ + K E
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDE 107
Query: 399 HLDWGMRLRIAMGMAYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEI 455
+A ++YC +H+ P N L SA L D+ + S
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRTD 165
Query: 456 AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ 515
+ ++++ GVL +E + G+ P+ + Q
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQ 212
Query: 516 PLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+ + +F + E +LI ++ +P +RP +R++
Sbjct: 213 ETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 89/222 (40%), Gaps = 24/222 (10%)
Query: 342 LEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESE 398
+E Q R++++ S + H N + L G+ + TR+ ++ EYAP GT++ + K E
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDE 107
Query: 399 HLDWGMRLRIAMGMAYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEI 455
+A ++YC +H+ P N L SA L D+ + S
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKP--ENLLLGSAGELKIADFGWSVHAPSSRRTD 165
Query: 456 AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ 515
+ ++++ GVL +E + G+ P+ + Q
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQ 212
Query: 516 PLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+ + +F + E +LI ++ +P +RP +R++
Sbjct: 213 ETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 254
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 17/163 (10%)
Query: 344 VQFRKKIDTLSKVNHKNFVNL-IGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW 402
V+ + + D L +VNH V L F E + + ++ ++ G LF + KE +
Sbjct: 71 VRTKMERDILVEVNHPFIVKLHYAFQTEGKLY---LILDFLRGGDLFTRLS-KEVMFTEE 126
Query: 403 GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXX 462
++ +A +A L+H+H L I + L + L E+ KL+D E E
Sbjct: 127 DVKFYLA-ELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA 183
Query: 463 XXXXXXXXXXXXXXXNV---------YNFGVLLFEMVTGRLPY 496
N ++FGVL+FEM+TG LP+
Sbjct: 184 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 89/242 (36%), Gaps = 50/242 (20%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL---------- 406
HKN +NL+G C ++ P ++ EYA G L E++ + ++ +
Sbjct: 99 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTF 156
Query: 407 --------RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
++A GM Y H L + V +TE+ K++D +I
Sbjct: 157 KDLVSCTYQLARGMEYLASQ------KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 459 EMXXXXX-----------XXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDW 506
+ +V++FGVL++E+ T G PY
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY-------PGI 263
Query: 507 AADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 566
+ L + +D + +E L +++ C A P +RPT + + L I
Sbjct: 264 PVEELFKLLKEGHRMDKPANCTNE-----LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 567 IT 568
+T
Sbjct: 319 LT 320
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 89/222 (40%), Gaps = 24/222 (10%)
Query: 342 LEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESE 398
+E Q R++++ S + H N + L G+ + TR+ ++ EYAP GT++ + K E
Sbjct: 53 VEHQLRREVEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDE 109
Query: 399 HLDWGMRLRIAMGMAYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEI 455
+A ++YC +H+ P N L SA L ++ + S
Sbjct: 110 QRTATYITELANALSYCHSKRVIHRDIKP--ENLLLGSAGELKIANFGWSVHAPSSRRTT 167
Query: 456 AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ 515
+ ++++ GVL +E + G+ P+ + Q
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQ 214
Query: 516 PLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+ + +F + E +LI ++ +P +RP +R++
Sbjct: 215 ETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 256
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 17/163 (10%)
Query: 344 VQFRKKIDTLSKVNHKNFVNL-IGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW 402
V+ + + D L +VNH V L F E + + ++ ++ G LF + KE +
Sbjct: 72 VRTKMERDILVEVNHPFIVKLHYAFQTEGKLY---LILDFLRGGDLFTRLS-KEVMFTEE 127
Query: 403 GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXX 462
++ +A +A L+H+H L I + L + L E+ KL+D E E
Sbjct: 128 DVKFYLA-ELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA 184
Query: 463 XXXXXXXXXXXXXXXNV---------YNFGVLLFEMVTGRLPY 496
N ++FGVL+FEM+TG LP+
Sbjct: 185 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 17/163 (10%)
Query: 344 VQFRKKIDTLSKVNHKNFVNL-IGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW 402
V+ + + D L +VNH V L F E + + ++ ++ G LF + KE +
Sbjct: 71 VRTKMERDILVEVNHPFIVKLHYAFQTEGKLY---LILDFLRGGDLFTRLS-KEVMFTEE 126
Query: 403 GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXX 462
++ +A +A L+H+H L I + L + L E+ KL+D E E
Sbjct: 127 DVKFYLA-ELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA 183
Query: 463 XXXXXXXXXXXXXXXNV---------YNFGVLLFEMVTGRLPY 496
N ++FGVL+FEM+TG LP+
Sbjct: 184 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 81/211 (38%), Gaps = 22/211 (10%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
+GS GTV KG + + L+ + + + + ++++ V +I
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 366 GFCEEEEPFTRMMVFEYAP-NGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNP 424
G CE E M + E P N L ++ H+K+ ++ + +++MGM Y E
Sbjct: 437 GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGMKYLEESN----- 489
Query: 425 PIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXXXXXXXXX------------XXX 472
H L + V L + AK+SD + E
Sbjct: 490 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 548
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGS 502
+V++FGVL++E + G+ PY GS
Sbjct: 549 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 579
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 81/211 (38%), Gaps = 22/211 (10%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
+GS GTV KG + + L+ + + + + ++++ V +I
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 366 GFCEEEEPFTRMMVFEYAP-NGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNP 424
G CE E M + E P N L ++ H+K+ ++ + +++MGM Y E
Sbjct: 438 GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGMKYLEESN----- 490
Query: 425 PIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXXXXXXXXX------------XXX 472
H L + V L + AK+SD + E
Sbjct: 491 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 549
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGS 502
+V++FGVL++E + G+ PY GS
Sbjct: 550 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 580
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 302 FSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNF 361
S+++G V++G ++ + + ++VQ R+ + L K+NHKN
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNI--SFLRPVDVQMRE-FEVLKKLNHKNI 69
Query: 362 VNLIGFCEEEEPFTRMMVFEYAPNGTLF 389
V L EE ++++ E+ P G+L+
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLY 97
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 302 FSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNF 361
S+++G V++G ++ + + ++VQ R+ + L K+NHKN
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNI--SFLRPVDVQMRE-FEVLKKLNHKNI 69
Query: 362 VNLIGFCEEEEPFTRMMVFEYAPNGTLF 389
V L EE ++++ E+ P G+L+
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLY 97
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 92/229 (40%), Gaps = 37/229 (16%)
Query: 358 HKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLE 417
H+N VNL+G C P +++ EY G L + ++S L+ IA A +
Sbjct: 109 HENIVNLLGACTHGGPV--LVITEYCCYGDLLNFLR-RKSRVLETDPAFAIANSTASTRD 165
Query: 418 HMH---QLNPPIA--------HNYLNSSAVHLTEDYAAKLSDLSFWNEI----------- 455
+H Q+ +A H + + V LT + AK+ D +I
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 456 AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGV 514
A + +V+++G+LL+E+ + G PY G L + + + V
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY---PGILVN--SKFYKLV 280
Query: 515 QPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
+ Q P + + + ++++C +P RPT + I + L+E
Sbjct: 281 KDGYQMAQPAFAP------KNIYSIMQACWALEPTHRPTFQQICSFLQE 323
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 89/242 (36%), Gaps = 50/242 (20%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL---------- 406
HKN ++L+G C ++ P ++ EYA G L E++ + +++ +
Sbjct: 99 KHKNIIHLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 407 --------RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
++A GM Y H L + V +TE+ K++D +I
Sbjct: 157 KDLVSCTYQLARGMEYLASQ------KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 459 EMXXXXX-----------XXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDW 506
+ +V++FGVL++E+ T G PY
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY-------PGI 263
Query: 507 AADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 566
+ L + +D + +E L +++ C A P +RPT + + L I
Sbjct: 264 PVEELFKLLKEGHRMDKPANCTNE-----LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 567 IT 568
+T
Sbjct: 319 LT 320
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 95/260 (36%), Gaps = 70/260 (26%)
Query: 349 KIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWG----- 403
+ + L +VNH + + L G C ++ P +++ EYA G+L ++ES + G
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPL--LLIVEYAKYGSL--RGFLRESRKVGPGYLGSG 131
Query: 404 -----------------------MRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTE 440
+I+ GM Y E + H L + + + E
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM------SLVHRDLAARNILVAE 185
Query: 441 DYAAKLSDLSFWNEI-----------AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEM 489
K+SD ++ + +V++FGVLL+E+
Sbjct: 186 GRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 490 VT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGE----LIKSCV 544
VT G PY G+ P ++ + + E+ + E L+ C
Sbjct: 246 VTLGGNPY---------------PGIPP-ERLFNLLKTGHRMERPDNCSEEMYRLMLQCW 289
Query: 545 RADPEKRPTMRDIAAILREI 564
+ +P+KRP DI+ L ++
Sbjct: 290 KQEPDKRPVFADISKDLEKM 309
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 94/259 (36%), Gaps = 68/259 (26%)
Query: 349 KIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWG----- 403
+ + L +VNH + + L G C ++ P +++ EYA G+L ++ES + G
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPL--LLIVEYAKYGSL--RGFLRESRKVGPGYLGSG 131
Query: 404 -----------------------MRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTE 440
+I+ GM Y E + H L + + + E
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM------KLVHRDLAARNILVAE 185
Query: 441 DYAAKLSDLSFWNEI-----------AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEM 489
K+SD ++ + +V++FGVLL+E+
Sbjct: 186 GRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 490 VT-GRLPYLVDNGSLEDWAADYLSGVQPLQQF-VDPTLSSFDEEQ--LETLGELIKSCVR 545
VT G PY G+ P + F + T + E + L+ C +
Sbjct: 246 VTLGGNPY---------------PGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWK 290
Query: 546 ADPEKRPTMRDIAAILREI 564
+P+KRP DI+ L ++
Sbjct: 291 QEPDKRPVFADISKDLEKM 309
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 60/155 (38%), Gaps = 6/155 (3%)
Query: 293 SELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDT 352
EL+A+C VIG+ G V G L + + + F +
Sbjct: 38 KELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASI 97
Query: 353 LSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTL--FEHIHIKESEHLDW-GMRLRIA 409
+ + +H N V+L G +P M+V E+ NG L F H + + GM IA
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPV--MIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIA 155
Query: 410 MGMAYCLEHMHQLNPPIAHNYL-NSSAVHLTEDYA 443
GM Y + + A N L NS+ V D+
Sbjct: 156 AGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFG 190
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 100/268 (37%), Gaps = 27/268 (10%)
Query: 298 ACEDF--SNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSK 355
A EDF +G G VY I + +E Q R++++ S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSH 67
Query: 356 VNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHIHI--KESEHLDWGMRLRIAMGM 412
+ H N + L G+ + TR+ ++ EYAP GT++ + K E +A +
Sbjct: 68 LRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 413 AYCLEH--MHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEIAMAEMXXXXXXXXX 469
+YC +H+ P N L SA L ++ + S +
Sbjct: 125 SYCHSKRVIHRDIKP--ENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIE 182
Query: 470 XXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFD 529
++++ GVL +E + G+ P+ + Q + + +F
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------------YQETYKRISRVEFTFP 229
Query: 530 EEQLETLGELIKSCVRADPEKRPTMRDI 557
+ E +LI ++ +P +RP +R++
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREV 257
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 94/259 (36%), Gaps = 68/259 (26%)
Query: 349 KIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWG----- 403
+ + L +VNH + + L G C ++ P +++ EYA G+L ++ES + G
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPL--LLIVEYAKYGSL--RGFLRESRKVGPGYLGSG 131
Query: 404 -----------------------MRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTE 440
+I+ GM Y E + H L + + + E
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM------KLVHRDLAARNILVAE 185
Query: 441 DYAAKLSDLSFWNEI-----------AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEM 489
K+SD ++ + +V++FGVLL+E+
Sbjct: 186 GRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 490 VT-GRLPYLVDNGSLEDWAADYLSGVQPLQQF-VDPTLSSFDEEQ--LETLGELIKSCVR 545
VT G PY G+ P + F + T + E + L+ C +
Sbjct: 246 VTLGGNPY---------------PGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWK 290
Query: 546 ADPEKRPTMRDIAAILREI 564
+P+KRP DI+ L ++
Sbjct: 291 QEPDKRPVFADISKDLEKM 309
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 88/242 (36%), Gaps = 50/242 (20%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL---------- 406
HKN +NL+G C ++ P ++ YA G L E++ + +++ +
Sbjct: 99 KHKNIINLLGACTQDGPL--YVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 407 --------RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
++A GM Y H L + V +TE+ K++D +I
Sbjct: 157 KDLVSCTYQLARGMEYLASQ------KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 459 EMXXXXX-----------XXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDW 506
+ +V++FGVL++E+ T G PY
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY-------PGI 263
Query: 507 AADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 566
+ L + +D + +E L +++ C A P +RPT + + L I
Sbjct: 264 PVEELFKLLKEGHRMDKPANCTNE-----LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 567 IT 568
+T
Sbjct: 319 LT 320
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 88/242 (36%), Gaps = 50/242 (20%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL---------- 406
HKN + L+G C ++ P ++ EYA G L E++ + +++ +
Sbjct: 99 KHKNIITLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 407 --------RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
++A GM Y H L + V +TE+ K++D +I
Sbjct: 157 KDLVSCTYQLARGMEYLASQ------KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 459 EMXXXXX-----------XXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDW 506
+ +V++FGVL++E+ T G PY
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY-------PGI 263
Query: 507 AADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 566
+ L + +D + +E L +++ C A P +RPT + + L I
Sbjct: 264 PVEELFKLLKEGHRMDKPANCTNE-----LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 567 IT 568
+T
Sbjct: 319 LT 320
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 86/238 (36%), Gaps = 53/238 (22%)
Query: 358 HKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWG-------------- 403
H+N VNL+G C P +++ EY G L + K L++
Sbjct: 109 HENIVNLLGACTHGGPV--LVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSR 166
Query: 404 ----MRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI---- 455
++A GMA+ + H + + V LT + AK+ D +I
Sbjct: 167 DLLHFSSQVAQGMAFLA------SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 220
Query: 456 -------AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLED 505
A + +V+++G+LL+E+ + G PY ++ N
Sbjct: 221 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 280
Query: 506 WAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
D QP F + S ++++C +P RPT + I + L+E
Sbjct: 281 LVKDGYQMAQP--AFAPKNIYS-----------IMQACWALEPTHRPTFQQICSFLQE 325
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 17/163 (10%)
Query: 344 VQFRKKIDTLSKVNHKNFVNL-IGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW 402
V+ + + D L+ VNH V L F E + + ++ ++ G LF + KE +
Sbjct: 75 VRTKMERDILADVNHPFVVKLHYAFQTEGKLY---LILDFLRGGDLFTRLS-KEVMFTEE 130
Query: 403 GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXX 462
++ +A +A L+H+H L I + L + L E+ KL+D E E
Sbjct: 131 DVKFYLAE-LALGLDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKA 187
Query: 463 XXXXXXXXXXXXXXXNV---------YNFGVLLFEMVTGRLPY 496
N +++GVL+FEM+TG LP+
Sbjct: 188 YSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 88/242 (36%), Gaps = 50/242 (20%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRL---------- 406
HKN +NL+G C ++ P ++ YA G L E++ + +++ +
Sbjct: 99 KHKNIINLLGACTQDGPL--YVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 407 --------RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
++A GM Y H L + V +TE+ K++D +I
Sbjct: 157 KDLVSCTYQLARGMEYLASQ------KCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 459 EMXXXXX-----------XXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDW 506
+ +V++FGVL++E+ T G PY
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY-------PGI 263
Query: 507 AADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 566
+ L + +D + +E L +++ C A P +RPT + + L I
Sbjct: 264 PVEELFKLLKEGHRMDKPANCTNE-----LYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 567 IT 568
+T
Sbjct: 319 LT 320
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 82/211 (38%), Gaps = 22/211 (10%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
+GS GTV KG + + L+ + + + + ++++ V +I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 366 GFCEEEEPFTRMMVFEYAP-NGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNP 424
G CE E M + E P N L ++ H+K+ ++ + +++MGM Y E
Sbjct: 79 GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGMKYLEE------S 130
Query: 425 PIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXXXXXXXXX------------XXX 472
H L + V L + AK+SD + E
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYK 190
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGS 502
+V++FGVL++E + G+ PY GS
Sbjct: 191 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 221
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 81/211 (38%), Gaps = 22/211 (10%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
+GS GTV KG + + L+ + + + + ++++ V +I
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 366 GFCEEEEPFTRMMVFEYAP-NGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNP 424
G CE E M + E P N L ++ H+K+ ++ + +++MGM Y E
Sbjct: 73 GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGMKYLEE------S 124
Query: 425 PIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXXXXXXXXX------------XXX 472
H L + V L + AK+SD + E
Sbjct: 125 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 184
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGS 502
+V++FGVL++E + G+ PY GS
Sbjct: 185 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 215
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 67/161 (41%), Gaps = 23/161 (14%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI---HIKESEHLDW 402
++++ID L + H++ + G CE++ + +V EY P G+L +++ I ++ L +
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLF 122
Query: 403 GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE--- 459
+I GMAY L H + H L + V L D K+ D +
Sbjct: 123 AQ--QICEGMAY-LHSQHYI-----HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 174
Query: 460 ---------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT 491
+ +V++FGV L+E++T
Sbjct: 175 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR 405
+K+I+ L + H+N V G C E+ ++ E+ P+G+L E++ K ++ +
Sbjct: 70 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLP-KNKNKINLKQQ 128
Query: 406 LRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI 455
L+ A+ + ++++ H L + V + ++ K+ D I
Sbjct: 129 LKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTKAI 176
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 81/211 (38%), Gaps = 22/211 (10%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
+GS GTV KG + + L+ + + + + ++++ V +I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 366 GFCEEEEPFTRMMVFEYAP-NGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNP 424
G CE E M + E P N L ++ H+K+ ++ + +++MGM Y E
Sbjct: 79 GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGMKYLEE------S 130
Query: 425 PIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXXXXXXXXX------------XXX 472
H L + V L + AK+SD + E
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 190
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGS 502
+V++FGVL++E + G+ PY GS
Sbjct: 191 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 221
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 81/211 (38%), Gaps = 22/211 (10%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
+GS GTV KG + + L+ + + + + ++++ V +I
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 366 GFCEEEEPFTRMMVFEYAP-NGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNP 424
G CE E M + E P N L ++ H+K+ ++ + +++MGM Y E
Sbjct: 93 GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGMKYLEE------S 144
Query: 425 PIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXXXXXXXXX------------XXX 472
H L + V L + AK+SD + E
Sbjct: 145 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 204
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGS 502
+V++FGVL++E + G+ PY GS
Sbjct: 205 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 235
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 81/211 (38%), Gaps = 22/211 (10%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
+GS GTV KG + + L+ + + + + ++++ V +I
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 366 GFCEEEEPFTRMMVFEYAP-NGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNP 424
G CE E M + E P N L ++ H+K+ ++ + +++MGM Y E
Sbjct: 85 GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGMKYLEE------S 136
Query: 425 PIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXXXXXXXXX------------XXX 472
H L + V L + AK+SD + E
Sbjct: 137 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 196
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGS 502
+V++FGVL++E + G+ PY GS
Sbjct: 197 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 227
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%)
Query: 13 LEGTLAPEIQSLTHIKSIILRNNSFSGIIPXXXXXXXXXXXXXXXHNNFSGPLPNDLGIN 72
L G + + + T++ I L NN +G IP +N+FSG +P +LG
Sbjct: 475 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDC 534
Query: 73 HSLTILLLDNNDFVGSLSPEIYK 95
SL L L+ N F G++ ++K
Sbjct: 535 RSLIWLDLNTNLFNGTIPAAMFK 557
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 9/95 (9%)
Query: 4 MCRN----LKDLCLE-----GTLAPEIQSLTHIKSIILRNNSFSGIIPXXXXXXXXXXXX 54
+C+N L++L L+ G + P + + + + S+ L N SG IP
Sbjct: 385 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 444
Query: 55 XXXHNNFSGPLPNDLGINHSLTILLLDNNDFVGSL 89
N G +P +L +L L+LD ND G +
Sbjct: 445 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEI 479
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 91/228 (39%), Gaps = 33/228 (14%)
Query: 341 NLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI--HIKESE 398
+++ + ++I L + H + + L + ++ +MV EYA N LF++I K SE
Sbjct: 55 DMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEI--IMVIEYAGN-ELFDYIVQRDKMSE 111
Query: 399 HLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
+I + YC H H+ I H L + L E K++D N +
Sbjct: 112 QEARRFFQQIISAVEYC--HRHK----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165
Query: 459 EMXXXX---------XXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAAD 509
+V++ GV+L+ M+ RLP+ D+ S+ +
Sbjct: 166 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF--DDESIPVLFKN 223
Query: 510 YLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+GV L +F+ P + LIK + +P R ++ +I
Sbjct: 224 ISNGVYTLPKFLSPGAAG-----------LIKRMLIVNPLNRISIHEI 260
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%)
Query: 13 LEGTLAPEIQSLTHIKSIILRNNSFSGIIPXXXXXXXXXXXXXXXHNNFSGPLPNDLGIN 72
L G + + + T++ I L NN +G IP +N+FSG +P +LG
Sbjct: 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDC 537
Query: 73 HSLTILLLDNNDFVGSLSPEIYK 95
SL L L+ N F G++ ++K
Sbjct: 538 RSLIWLDLNTNLFNGTIPAAMFK 560
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 9/95 (9%)
Query: 4 MCRN----LKDLCLE-----GTLAPEIQSLTHIKSIILRNNSFSGIIPXXXXXXXXXXXX 54
+C+N L++L L+ G + P + + + + S+ L N SG IP
Sbjct: 388 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 447
Query: 55 XXXHNNFSGPLPNDLGINHSLTILLLDNNDFVGSL 89
N G +P +L +L L+LD ND G +
Sbjct: 448 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEI 482
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 81/211 (38%), Gaps = 22/211 (10%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
+GS GTV KG + + L+ + + + + ++++ V +I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 366 GFCEEEEPFTRMMVFEYAP-NGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNP 424
G CE E M + E P N L ++ H+K+ ++ + +++MGM Y E
Sbjct: 95 GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGMKYLEE------S 146
Query: 425 PIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXXXXXXXXX------------XXX 472
H L + V L + AK+SD + E
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGS 502
+V++FGVL++E + G+ PY GS
Sbjct: 207 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 237
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 81/211 (38%), Gaps = 22/211 (10%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
+GS GTV KG + + L+ + + + + ++++ V +I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 366 GFCEEEEPFTRMMVFEYAP-NGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNP 424
G CE E M + E P N L ++ H+K+ ++ + +++MGM Y E
Sbjct: 95 GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGMKYLEE------S 146
Query: 425 PIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXXXXXXXXX------------XXX 472
H L + V L + AK+SD + E
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGS 502
+V++FGVL++E + G+ PY GS
Sbjct: 207 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 237
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 67/161 (41%), Gaps = 23/161 (14%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI---HIKESEHLDW 402
++++ID L + H++ + G CE++ + +V EY P G+L +++ I ++ L +
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLF 122
Query: 403 GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE--- 459
+I GMAY L H + H L + V L D K+ D +
Sbjct: 123 AQ--QICEGMAY-LHAQHYI-----HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 174
Query: 460 ---------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT 491
+ +V++FGV L+E++T
Sbjct: 175 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 81/211 (38%), Gaps = 22/211 (10%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLI 365
+GS GTV KG + + L+ + + + + ++++ V +I
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 366 GFCEEEEPFTRMMVFEYAP-NGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNP 424
G CE E M + E P N L ++ H+K+ ++ + +++MGM Y E
Sbjct: 75 GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMGMKYLEE------S 126
Query: 425 PIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXXXXXXXXX------------XXX 472
H L + V L + AK+SD + E
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 186
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGS 502
+V++FGVL++E + G+ PY GS
Sbjct: 187 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 217
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 91/228 (39%), Gaps = 33/228 (14%)
Query: 341 NLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI--HIKESE 398
+++ + ++I L + H + + L + ++ +MV EYA N LF++I K SE
Sbjct: 46 DMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEI--IMVIEYAGN-ELFDYIVQRDKMSE 102
Query: 399 HLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
+I + YC H H+ I H L + L E K++D N +
Sbjct: 103 QEARRFFQQIISAVEYC--HRHK----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 156
Query: 459 EMXXXX---------XXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAAD 509
+V++ GV+L+ M+ RLP+ D+ S+ +
Sbjct: 157 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF--DDESIPVLFKN 214
Query: 510 YLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+GV L +F+ P + LIK + +P R ++ +I
Sbjct: 215 ISNGVYTLPKFLSPGAAG-----------LIKRMLIVNPLNRISIHEI 251
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR 405
+K+I+ L + H+N V G C E+ ++ E+ P+G+L E++ K ++ +
Sbjct: 58 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLP-KNKNKINLKQQ 116
Query: 406 LRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI 455
L+ A+ + ++++ H L + V + ++ K+ D I
Sbjct: 117 LKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTKAI 164
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 91/228 (39%), Gaps = 33/228 (14%)
Query: 341 NLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI--HIKESE 398
+++ + ++I L + H + + L + ++ +MV EYA N LF++I K SE
Sbjct: 50 DMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEI--IMVIEYAGN-ELFDYIVQRDKMSE 106
Query: 399 HLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
+I + YC H H+ I H L + L E K++D N +
Sbjct: 107 QEARRFFQQIISAVEYC--HRHK----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 160
Query: 459 EMXXXX---------XXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAAD 509
+V++ GV+L+ M+ RLP+ D+ S+ +
Sbjct: 161 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF--DDESIPVLFKN 218
Query: 510 YLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+GV L +F+ P + LIK + +P R ++ +I
Sbjct: 219 ISNGVYTLPKFLSPGAAG-----------LIKRMLIVNPLNRISIHEI 255
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 91/228 (39%), Gaps = 33/228 (14%)
Query: 341 NLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI--HIKESE 398
+++ + ++I L + H + + L + ++ +MV EYA N LF++I K SE
Sbjct: 56 DMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEI--IMVIEYAGN-ELFDYIVQRDKMSE 112
Query: 399 HLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
+I + YC H H+ I H L + L E K++D N +
Sbjct: 113 QEARRFFQQIISAVEYC--HRHK----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 166
Query: 459 EMXXXX---------XXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAAD 509
+V++ GV+L+ M+ RLP+ D+ S+ +
Sbjct: 167 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF--DDESIPVLFKN 224
Query: 510 YLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
+GV L +F+ P + LIK + +P R ++ +I
Sbjct: 225 ISNGVYTLPKFLSPGAAG-----------LIKRMLIVNPLNRISIHEI 261
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 93/246 (37%), Gaps = 38/246 (15%)
Query: 341 NLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHL 400
L ++++I+ L + H++ V G CE++ + +V EY P G+L +++ H
Sbjct: 53 QLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHC 108
Query: 401 DWGMRL-----RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI 455
+L +I GMAY L H + H L + V L D K+ D +
Sbjct: 109 VGLAQLLLFAQQICEGMAY-LHAQHYI-----HRALAARNVLLDNDRLVKIGDFGLAKAV 162
Query: 456 AMAE------------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSL 503
+ +V++FGV L+E++T Y N S
Sbjct: 163 PEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT----YCDSNQSP 218
Query: 504 EDWAADYLSGVQPLQQFVDPTLSSFDEEQLET-------LGELIKSCVRADPEKRPTMRD 556
+ + Q + T E+L + L+K+C + RPT ++
Sbjct: 219 HTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQN 278
Query: 557 IAAILR 562
+ IL+
Sbjct: 279 LVPILQ 284
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/164 (18%), Positives = 69/164 (42%), Gaps = 20/164 (12%)
Query: 345 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGM 404
+F +++ S+++H+N V++I EE++ + +V EY TL E+I +D +
Sbjct: 57 RFEREVHNSSQLSHQNIVSMIDVDEEDDCY--YLVMEYIEGPTLSEYIESHGPLSVDTAI 114
Query: 405 RL--RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA------ 456
+I G ++H H + I H + + + + K+ D ++
Sbjct: 115 NFTNQILDG----IKHAHDMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ 168
Query: 457 ----MAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPY 496
+ + ++Y+ G++L+EM+ G P+
Sbjct: 169 TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPF 212
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 93/246 (37%), Gaps = 38/246 (15%)
Query: 341 NLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHL 400
L ++++I+ L + H++ V G CE++ + +V EY P G+L +++ H
Sbjct: 52 QLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHC 107
Query: 401 DWGMRL-----RIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI 455
+L +I GMAY L H + H L + V L D K+ D +
Sbjct: 108 VGLAQLLLFAQQICEGMAY-LHAQHYI-----HRALAARNVLLDNDRLVKIGDFGLAKAV 161
Query: 456 AMAE------------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSL 503
+ +V++FGV L+E++T Y N S
Sbjct: 162 PEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT----YCDSNQSP 217
Query: 504 EDWAADYLSGVQPLQQFVDPTLSSFDEEQLET-------LGELIKSCVRADPEKRPTMRD 556
+ + Q + T E+L + L+K+C + RPT ++
Sbjct: 218 HTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQN 277
Query: 557 IAAILR 562
+ IL+
Sbjct: 278 LVPILQ 283
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 23/90 (25%)
Query: 478 NVYNFGVLLFEMVTGRLPY------LVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
++++FG+ E+ TG PY V +L++ +GVQ D+E
Sbjct: 204 DIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQ-------------DKE 250
Query: 532 QLETLGE----LIKSCVRADPEKRPTMRDI 557
L+ G+ +I C++ DPEKRPT ++
Sbjct: 251 MLKKYGKSFRKMISLCLQKDPEKRPTAAEL 280
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 23/161 (14%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI---HIKESEHLDW 402
++++ID L + H++ + G CE+ + +V EY P G+L +++ I ++ L +
Sbjct: 80 WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLF 139
Query: 403 GMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE--- 459
+I GMAY L H + H L + V L D K+ D +
Sbjct: 140 AQ--QICEGMAY-LHAQHYI-----HRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXY 191
Query: 460 ---------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT 491
+ +V++FGV L+E++T
Sbjct: 192 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 23/90 (25%)
Query: 478 NVYNFGVLLFEMVTGRLPY------LVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
++++FG+ E+ TG PY V +L++ +GVQ D+E
Sbjct: 209 DIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQ-------------DKE 255
Query: 532 QLETLGE----LIKSCVRADPEKRPTMRDI 557
L+ G+ +I C++ DPEKRPT ++
Sbjct: 256 MLKKYGKSFRKMISLCLQKDPEKRPTAAEL 285
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 15/91 (16%)
Query: 478 NVYNFGVLLFEMVT-GRLPYL-VDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLET 535
+V+ FGV ++E++T G+ PY ++N + +YL G L+Q E +E
Sbjct: 221 DVWAFGVTMWEIMTRGQTPYAGIENAEI----YNYLIGGNRLKQ---------PPECMEE 267
Query: 536 LGELIKSCVRADPEKRPTMRDIAAILREITG 566
+ +L+ C ADP++RP+ + L I G
Sbjct: 268 VYDLMYQCWSADPKQRPSFTCLRMELENILG 298
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 79/213 (37%), Gaps = 12/213 (5%)
Query: 294 ELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTL 353
E++A+C VIG G V G L + + F + +
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 63
Query: 354 SKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW---GMRLRIAM 410
+ +H N ++L G + +P M++ EY NG+L + + GM I
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPV--MIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGS 121
Query: 411 GMAYCLEHMHQLNPPIAHNYL-NSSAVHLTEDYAAK--LSD---LSFWNEIAMAEMXXXX 464
GM Y + + A N L NS+ V D+ L D ++ +
Sbjct: 122 GMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA 181
Query: 465 XXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY 496
+V+++G++++E+++ G PY
Sbjct: 182 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 214
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 79/213 (37%), Gaps = 12/213 (5%)
Query: 294 ELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTL 353
E++A+C VIG G V G L + + F + +
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 69
Query: 354 SKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW---GMRLRIAM 410
+ +H N ++L G + +P M++ EY NG+L + + GM I
Sbjct: 70 GQFDHPNIIHLEGVVTKCKPV--MIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGS 127
Query: 411 GMAYCLEHMHQLNPPIAHNYL-NSSAVHLTEDYAAK--LSD---LSFWNEIAMAEMXXXX 464
GM Y + + A N L NS+ V D+ L D ++ +
Sbjct: 128 GMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA 187
Query: 465 XXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY 496
+V+++G++++E+++ G PY
Sbjct: 188 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 220
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 118/313 (37%), Gaps = 57/313 (18%)
Query: 278 QLQKAFVTGVPKLKRSELEAACEDFSNVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXK 336
+L+ G PK K + E IG GTVY ++ G E+
Sbjct: 8 KLRSIVSVGDPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQM------ 53
Query: 337 DWPKNLEVQFRKK-----IDTLSKVNHKNFVN-LIGFCEEEEPFTRMMVFEYAPNGTLFE 390
NL+ Q +K+ I + + + N VN L + +E + +V EY G+L +
Sbjct: 54 ----NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW---VVMEYLAGGSLTD 106
Query: 391 HIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLS 450
+ +D G + LE +H + + H + S + L D + KL+D
Sbjct: 107 ---VVTETCMDEGQIAAVCRECLQALEFLH--SNQVIHRDIKSDNILLGMDGSVKLTDFG 161
Query: 451 FWNEIA-----MAEMXXX----XXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNG 501
F +I +EM ++++ G++ EM+ G PYL +N
Sbjct: 162 FCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN- 220
Query: 502 SLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI---- 557
A YL + +P E+ + + C+ D EKR + +++
Sbjct: 221 ---PLRALYLIATNGTPELQNP------EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQ 271
Query: 558 -AAILREITGITP 569
I + ++ +TP
Sbjct: 272 FLKIAKPLSSLTP 284
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 41/232 (17%)
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCL 416
H+N VNL+G C P +++ EY G L + ++S L+ IA
Sbjct: 108 QHENIVNLLGACTHGGPV--LVITEYCCYGDLLNFLR-RKSRVLETDPAFAIANSTLSTR 164
Query: 417 EHMH---QLNPPIA--------HNYLNSSAVHLTEDYAAKLSDLSFWNEI---------- 455
+ +H Q+ +A H + + V LT + AK+ D +I
Sbjct: 165 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 456 -AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVT-GRLPY--LVDNGSLEDWAADYL 511
A + +V+++G+LL+E+ + G PY ++ N D
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY 284
Query: 512 SGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILRE 563
QP F + S ++++C +P RPT + I + L+E
Sbjct: 285 QMAQP--AFAPKNIYS-----------IMQACWALEPTHRPTFQQICSFLQE 323
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 347 RKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLF-----EHIHIKESEHLD 401
RK+I T+S + H VNL E++ +M++E+ G LF EH + E E ++
Sbjct: 202 RKEIQTMSVLRHPTLVNLHDAFEDDNEM--VMIYEFMSGGELFEKVADEHNKMSEDEAVE 259
Query: 402 WGMRLRIAMGMAYCLEHMHQLN 423
+ MR ++ G+ HMH+ N
Sbjct: 260 Y-MR-QVCKGLC----HMHENN 275
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 59/161 (36%), Gaps = 11/161 (6%)
Query: 294 ELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTL 353
E++A+C VIG G V G L + + F + +
Sbjct: 25 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 84
Query: 354 SKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDW---GMRLRIAM 410
+ +H N ++L G + +P M++ EY NG+L + + GM I
Sbjct: 85 GQFDHPNIIHLEGVVTKCKPV--MIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGS 142
Query: 411 GMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF 451
GM Y L M + H L + + + + K+SD
Sbjct: 143 GMKY-LSDMSAV-----HRDLAARNILVNSNLVCKVSDFGM 177
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 117/313 (37%), Gaps = 57/313 (18%)
Query: 278 QLQKAFVTGVPKLKRSELEAACEDFSNVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXK 336
+L+ G PK K + E IG GTVY ++ G E+
Sbjct: 8 KLRSIVSVGDPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQM------ 53
Query: 337 DWPKNLEVQFRKK-----IDTLSKVNHKNFVN-LIGFCEEEEPFTRMMVFEYAPNGTLFE 390
NL+ Q +K+ I + + + N VN L + +E + +V EY G+L +
Sbjct: 54 ----NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW---VVMEYLAGGSLTD 106
Query: 391 HIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLS 450
+ +D G + LE +H + + H + S + L D + KL+D
Sbjct: 107 ---VVTETCMDEGQIAAVCRECLQALEFLH--SNQVIHRDIKSDNILLGMDGSVKLTDFG 161
Query: 451 FWNEIAMAEMXXXXXX---------XXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNG 501
F +I + ++++ G++ EM+ G PYL +N
Sbjct: 162 FCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN- 220
Query: 502 SLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI---- 557
A YL + +P E+ + + C+ D EKR + +++
Sbjct: 221 ---PLRALYLIATNGTPELQNP------EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQ 271
Query: 558 -AAILREITGITP 569
I + ++ +TP
Sbjct: 272 FLKIAKPLSSLTP 284
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 107/266 (40%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 83 RLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 137
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 249
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ +++ C D + RP R++
Sbjct: 250 ----VYMIMRKCWMIDADSRPKFREL 271
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 117/313 (37%), Gaps = 57/313 (18%)
Query: 278 QLQKAFVTGVPKLKRSELEAACEDFSNVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXK 336
+L+ G PK K + E IG GTVY ++ G E+
Sbjct: 9 KLRSIVSVGDPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQM------ 54
Query: 337 DWPKNLEVQFRKK-----IDTLSKVNHKNFVNLI-GFCEEEEPFTRMMVFEYAPNGTLFE 390
NL+ Q +K+ I + + + N VN + + +E + +V EY G+L +
Sbjct: 55 ----NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW---VVMEYLAGGSLTD 107
Query: 391 HIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLS 450
+ +D G + LE +H + + H + S + L D + KL+D
Sbjct: 108 ---VVTETCMDEGQIAAVCRECLQALEFLH--SNQVIHRDIKSDNILLGMDGSVKLTDFG 162
Query: 451 FWNEIAMAEMXXXXXX---------XXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNG 501
F +I + ++++ G++ EM+ G PYL +N
Sbjct: 163 FCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN- 221
Query: 502 SLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIA--- 558
A YL + +P E+ + + C+ D EKR + +++
Sbjct: 222 ---PLRALYLIATNGTPELQNP------EKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQ 272
Query: 559 --AILREITGITP 569
I + ++ +TP
Sbjct: 273 FLKIAKPLSSLTP 285
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 116/313 (37%), Gaps = 57/313 (18%)
Query: 278 QLQKAFVTGVPKLKRSELEAACEDFSNVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXK 336
+L+ G PK K + E IG GTVY ++ G E+
Sbjct: 8 KLRSIVSVGDPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQM------ 53
Query: 337 DWPKNLEVQFRKK-----IDTLSKVNHKNFVN-LIGFCEEEEPFTRMMVFEYAPNGTLFE 390
NL+ Q +K+ I + + + N VN L + +E + +V EY G+L +
Sbjct: 54 ----NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW---VVMEYLAGGSLTD 106
Query: 391 HIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLS 450
+ +D G + LE +H + + H + S + L D + KL+D
Sbjct: 107 ---VVTETCMDEGQIAAVCRECLQALEFLH--SNQVIHRDIKSDNILLGMDGSVKLTDFG 161
Query: 451 FWNEIAMAEMXXXXXX---------XXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNG 501
F +I + ++++ G++ EM+ G PYL +N
Sbjct: 162 FCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN- 220
Query: 502 SLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI---- 557
A YL + +P E+ + + C+ D EKR + +++
Sbjct: 221 ---PLRALYLIATNGTPELQNP------EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQ 271
Query: 558 -AAILREITGITP 569
I + ++ +TP
Sbjct: 272 FLKIAKPLSSLTP 284
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 107/278 (38%), Gaps = 19/278 (6%)
Query: 302 FSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNF 361
+ ++G G VY+G +N KD + + +F + + ++H +
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 75
Query: 362 VNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ 421
V LIG EEE + M ++ Y G E L+I MAY LE ++
Sbjct: 76 VKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAY-LESINC 134
Query: 422 LNPPIA-HNYLNSS--AVHLTE-DYAAKLSDLSFWN-EIAMAEMXXXXXXXXXXXXXXXX 476
++ IA N L +S V L + + + D ++ + +
Sbjct: 135 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 194
Query: 477 XNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLET 535
+V+ F V ++E+++ G+ P+ LE+ D + ++ + P L
Sbjct: 195 SDVWMFAVCMWEILSFGKQPFF----WLEN--KDVIGVLEKGDRLPKPDLCP------PV 242
Query: 536 LGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAI 573
L L+ C DP RP ++ L ++ + D A+
Sbjct: 243 LYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIAM 280
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 107/278 (38%), Gaps = 19/278 (6%)
Query: 302 FSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNF 361
+ ++G G VY+G +N KD + + +F + + ++H +
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 87
Query: 362 VNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ 421
V LIG EEE + M ++ Y G E L+I MAY LE ++
Sbjct: 88 VKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAY-LESINC 146
Query: 422 LNPPIA-HNYLNSS--AVHLTE-DYAAKLSDLSFWN-EIAMAEMXXXXXXXXXXXXXXXX 476
++ IA N L +S V L + + + D ++ + +
Sbjct: 147 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 206
Query: 477 XNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLET 535
+V+ F V ++E+++ G+ P+ LE+ D + ++ + P L
Sbjct: 207 SDVWMFAVCMWEILSFGKQPFF----WLEN--KDVIGVLEKGDRLPKPDLCP------PV 254
Query: 536 LGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAI 573
L L+ C DP RP ++ L ++ + D A+
Sbjct: 255 LYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIAM 292
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 347 RKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLF-----EHIHIKESEHLD 401
RK+I T+S + H VNL E++ +M++E+ G LF EH + E E ++
Sbjct: 96 RKEIQTMSVLRHPTLVNLHDAFEDDNEM--VMIYEFMSGGELFEKVADEHNKMSEDEAVE 153
Query: 402 WGMRLRIAMGMAYCLEHMHQLN 423
+ MR ++ G+ HMH+ N
Sbjct: 154 Y-MR-QVCKGLC----HMHENN 169
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 113/306 (36%), Gaps = 57/306 (18%)
Query: 285 TGVPKLKRSELEAACEDFSNVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLE 343
G PK K + E IG GTVY ++ G E+ NL+
Sbjct: 16 VGDPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQM----------NLQ 57
Query: 344 VQFRKK-----IDTLSKVNHKNFVNLI-GFCEEEEPFTRMMVFEYAPNGTLFEHIHIKES 397
Q +K+ I + + + N VN + + +E + +V EY G+L + +
Sbjct: 58 QQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW---VVMEYLAGGSLTD---VVTE 111
Query: 398 EHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM 457
+D G + LE +H + + H + S + L D + KL+D F +I
Sbjct: 112 TCMDEGQIAAVCRECLQALEFLH--SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITP 169
Query: 458 AEMXXXXXX---------XXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAA 508
+ ++++ G++ EM+ G PYL +N A
Sbjct: 170 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN----PLRA 225
Query: 509 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIA-----AILRE 563
YL + +P E+ + + C+ D EKR + +++ I +
Sbjct: 226 LYLIATNGTPELQNP------EKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKP 279
Query: 564 ITGITP 569
++ +TP
Sbjct: 280 LSSLTP 285
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 107/278 (38%), Gaps = 19/278 (6%)
Query: 302 FSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNF 361
+ ++G G VY+G +N KD + + +F + + ++H +
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 71
Query: 362 VNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ 421
V LIG EEE + M ++ Y G E L+I MAY LE ++
Sbjct: 72 VKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAY-LESINC 130
Query: 422 LNPPIA-HNYLNSS--AVHLTE-DYAAKLSDLSFWN-EIAMAEMXXXXXXXXXXXXXXXX 476
++ IA N L +S V L + + + D ++ + +
Sbjct: 131 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 190
Query: 477 XNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLET 535
+V+ F V ++E+++ G+ P+ LE+ D + ++ + P L
Sbjct: 191 SDVWMFAVCMWEILSFGKQPFF----WLEN--KDVIGVLEKGDRLPKPDLCP------PV 238
Query: 536 LGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAI 573
L L+ C DP RP ++ L ++ + D A+
Sbjct: 239 LYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIAM 276
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 341 NLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHI 392
+E Q R++++ S + H N + L G+ + TR+ ++ EYAP GT++ +
Sbjct: 54 GVEHQLRREVEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL 103
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 341 NLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM-MVFEYAPNGTLFEHI 392
+E Q R++++ S + H N + L G+ + TR+ ++ EYAP GT++ +
Sbjct: 54 GVEHQLRREVEIQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYREL 103
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 107/266 (40%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 81 RLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 135
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 247
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ +++ C D + RP R++
Sbjct: 248 ----VYMIMRKCWMIDADSRPKFREL 269
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 107/266 (40%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 83 RLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 137
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 249
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ +++ C D + RP R++
Sbjct: 250 ----VYMIMRKCWMIDADSRPKFREL 271
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 107/266 (40%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 84 RLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 138
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 250
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ +++ C D + RP R++
Sbjct: 251 ----VYMIMRKCWMIDADSRPKFREL 272
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 478 NVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLE-TL 536
+V++ G+ L+E+ TGR PY N S+ D + G P P LS+ +E + +
Sbjct: 211 DVWSLGITLYELATGRFPYPKWN-SVFDQLTQVVKG-DP------PQLSNSEEREFSPSF 262
Query: 537 GELIKSCVRADPEKRPTMRDI 557
+ C+ D KRP +++
Sbjct: 263 INFVNLCLTKDESKRPKYKEL 283
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 106/281 (37%), Gaps = 48/281 (17%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ-FRKKIDTLSKVNHKNFVNL 364
+G+ G V+ T + ++ P ++ V+ F + + + + H V L
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMK-------PGSMSVEAFLAEANVMKTLQHDKLVKL 248
Query: 365 IGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH------LDWGMRLRIAMGMAYCLEH 418
+E + ++ E+ G+L + + E +D+ + IA GMA+
Sbjct: 249 HAVVTKEPIY---IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ--IAEGMAF---- 299
Query: 419 MHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW-----NEIAMAE-----MXXXXXXXX 468
+ Q N H L ++ + ++ K++D NE E +
Sbjct: 300 IEQRN--YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI 357
Query: 469 XXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSS 527
+V++FG+LL E+VT GR+PY +S + ++
Sbjct: 358 NFGSFTIKSDVWSFGILLMEIVTYGRIPY------------PGMSNPEVIRALERGYRMP 405
Query: 528 FDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 568
E E L ++ C + PE+RPT I ++L + T
Sbjct: 406 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 107/266 (40%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 91 RLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 145
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 146 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 205
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 206 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 257
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ +++ C D + RP R++
Sbjct: 258 ----VYMIMRKCWMIDADSRPKFREL 279
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 103/274 (37%), Gaps = 48/274 (17%)
Query: 306 IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQ-FRKKIDTLSKVNHKNFVNL 364
+G+ G V+ T + ++ P ++ V+ F + + + + H V L
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMK-------PGSMSVEAFLAEANVMKTLQHDKLVKL 75
Query: 365 IGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH------LDWGMRLRIAMGMAYCLEH 418
+E + ++ E+ G+L + + E +D+ + IA GMA+
Sbjct: 76 HAVVTKEPIY---IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ--IAEGMAF---- 126
Query: 419 MHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI----------AMAEMXXXXXXXX 468
+ Q N H L ++ + ++ K++D I A +
Sbjct: 127 IEQRN--YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI 184
Query: 469 XXXXXXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSS 527
+V++FG+LL E+VT GR+PY +S + ++
Sbjct: 185 NFGSFTIKSDVWSFGILLMEIVTYGRIPY------------PGMSNPEVIRALERGYRMP 232
Query: 528 FDEEQLETLGELIKSCVRADPEKRPTMRDIAAIL 561
E E L ++ C + PE+RPT I ++L
Sbjct: 233 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 266
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR 405
F ++I+ L + H N V G C ++ EY P G+L +++ K E +D
Sbjct: 56 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 114
Query: 406 L----RIAMGMAY 414
L +I GM Y
Sbjct: 115 LQYTSQICKGMEY 127
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR 405
F ++I+ L + H N V G C ++ EY P G+L +++ K E +D
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 116
Query: 406 L----RIAMGMAY 414
L +I GM Y
Sbjct: 117 LQYTSQICKGMEY 129
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR 405
F ++I+ L + H N V G C ++ EY P G+L +++ K E +D
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 119
Query: 406 L----RIAMGMAY 414
L +I GM Y
Sbjct: 120 LQYTSQICKGMEY 132
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR 405
F ++I+ L + H N V G C ++ EY P G+L +++ K E +D
Sbjct: 65 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 123
Query: 406 L----RIAMGMAY 414
L +I GM Y
Sbjct: 124 LQYTSQICKGMEY 136
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR 405
F ++I+ L + H N V G C ++ EY P G+L +++ K E +D
Sbjct: 63 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 121
Query: 406 L----RIAMGMAY 414
L +I GM Y
Sbjct: 122 LQYTSQICKGMEY 134
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR 405
F ++I+ L + H N V G C ++ EY P G+L +++ K E +D
Sbjct: 57 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 115
Query: 406 L----RIAMGMAY 414
L +I GM Y
Sbjct: 116 LQYTSQICKGMEY 128
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR 405
F ++I+ L + H N V G C ++ EY P G+L +++ K E +D
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 116
Query: 406 L----RIAMGMAY 414
L +I GM Y
Sbjct: 117 LQYTSQICKGMEY 129
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR 405
F ++I+ L + H N V G C ++ EY P G+L +++ K E +D
Sbjct: 89 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 147
Query: 406 L----RIAMGMAY 414
L +I GM Y
Sbjct: 148 LQYTSQICKGMEY 160
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR 405
F ++I+ L + H N V G C ++ EY P G+L +++ K E +D
Sbjct: 64 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 122
Query: 406 L----RIAMGMAY 414
L +I GM Y
Sbjct: 123 LQYTSQICKGMEY 135
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR 405
F ++I+ L + H N V G C ++ EY P G+L +++ K E +D
Sbjct: 62 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 120
Query: 406 L----RIAMGMAY 414
L +I GM Y
Sbjct: 121 LQYTSQICKGMEY 133
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR 405
F ++I+ L + H N V G C ++ EY P G+L +++ K E +D
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 134
Query: 406 L----RIAMGMAY 414
L +I GM Y
Sbjct: 135 LQYTSQICKGMEY 147
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR 405
F ++I+ L + H N V G C ++ EY P G+L +++ K E +D
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 134
Query: 406 L----RIAMGMAY 414
L +I GM Y
Sbjct: 135 LQYTSQICKGMEY 147
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR 405
F ++I+ L + H N V G C ++ EY P G+L +++ K E +D
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 116
Query: 406 L----RIAMGMAY 414
L +I GM Y
Sbjct: 117 LQYTSQICKGMEY 129
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 85 RLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 139
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 199
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 200 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 251
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 252 ----VYMIMVKCWMIDADSRPKFREL 273
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR 405
F ++I+ L + H N V G C ++ EY P G+L +++ K E +D
Sbjct: 59 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 117
Query: 406 L----RIAMGMAY 414
L +I GM Y
Sbjct: 118 LQYTSQICKGMEY 130
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 83 RLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 137
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 249
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 250 ----VYMIMVKCWMIDADSRPKFREL 271
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 84 RLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 138
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 250
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 251 ----VYMIMVKCWMIDADSRPKFREL 272
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 85 RLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 139
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 199
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 200 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 251
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 252 ----VYMIMVKCWMIDADSRPKFREL 273
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 83 RLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 137
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 249
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 250 ----VYMIMVKCWMIDADSRPKFREL 271
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 82 RLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 136
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 196
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 197 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 248
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 249 ----VYMIMVKCWMIDADSRPKFREL 270
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR 405
F ++I+ L + H N V G C ++ E+ P G+L E++ K E +D
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQ-KHKERIDHIKL 119
Query: 406 L----RIAMGMAY 414
L +I GM Y
Sbjct: 120 LQYTSQICKGMEY 132
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 81 RLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 135
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 247
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 248 ----VYMIMVKCWMIDADSRPKFREL 269
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/83 (20%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 478 NVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS-SFDEEQLETL 536
+V++ G +L+ M G+ P+ ++ + L +DP F + + L
Sbjct: 205 DVWSLGCILYYMTYGKTPF-----------QQIINQISKLHAIIDPNHEIEFPDIPEKDL 253
Query: 537 GELIKSCVRADPEKRPTMRDIAA 559
+++K C++ DP++R ++ ++ A
Sbjct: 254 QDVLKCCLKRDPKQRISIPELLA 276
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 82 RLLGICLTS---TVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 136
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 196
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 197 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 248
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 249 ----VYMIMVKCWMIDADSRPKFREL 270
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/83 (20%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 478 NVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS-SFDEEQLETL 536
+V++ G +L+ M G+ P+ ++ + L +DP F + + L
Sbjct: 202 DVWSLGCILYYMTYGKTPF-----------QQIINQISKLHAIIDPNHEIEFPDIPEKDL 250
Query: 537 GELIKSCVRADPEKRPTMRDIAA 559
+++K C++ DP++R ++ ++ A
Sbjct: 251 QDVLKCCLKRDPKQRISIPELLA 273
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/83 (20%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 478 NVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS-SFDEEQLETL 536
+V++ G +L+ M G+ P+ ++ + L +DP F + + L
Sbjct: 201 DVWSLGCILYYMTYGKTPF-----------QQIINQISKLHAIIDPNHEIEFPDIPEKDL 249
Query: 537 GELIKSCVRADPEKRPTMRDIAA 559
+++K C++ DP++R ++ ++ A
Sbjct: 250 QDVLKCCLKRDPKQRISIPELLA 272
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/83 (20%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 478 NVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS-SFDEEQLETL 536
+V++ G +L+ M G+ P+ ++ + L +DP F + + L
Sbjct: 249 DVWSLGCILYYMTYGKTPF-----------QQIINQISKLHAIIDPNHEIEFPDIPEKDL 297
Query: 537 GELIKSCVRADPEKRPTMRDIAA 559
+++K C++ DP++R ++ ++ A
Sbjct: 298 QDVLKCCLKRDPKQRISIPELLA 320
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/83 (20%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 478 NVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS-SFDEEQLETL 536
+V++ G +L+ M G+ P+ ++ + L +DP F + + L
Sbjct: 221 DVWSLGCILYYMTYGKTPF-----------QQIINQISKLHAIIDPNHEIEFPDIPEKDL 269
Query: 537 GELIKSCVRADPEKRPTMRDIAA 559
+++K C++ DP++R ++ ++ A
Sbjct: 270 QDVLKCCLKRDPKQRISIPELLA 292
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/83 (20%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 478 NVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS-SFDEEQLETL 536
+V++ G +L+ M G+ P+ ++ + L +DP F + + L
Sbjct: 221 DVWSLGCILYYMTYGKTPF-----------QQIINQISKLHAIIDPNHEIEFPDIPEKDL 269
Query: 537 GELIKSCVRADPEKRPTMRDIAA 559
+++K C++ DP++R ++ ++ A
Sbjct: 270 QDVLKCCLKRDPKQRISIPELLA 292
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 81/238 (34%), Gaps = 45/238 (18%)
Query: 341 NLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHL 400
N E +K+I L ++ HKN + L+ EE MV EY G E L
Sbjct: 48 NGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGM---------QEML 98
Query: 401 DWGMRLRIAMGMA---YC-----LEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW 452
D R + A +C LE++H I H + + LT K+S L
Sbjct: 99 DSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG--IVHKDIKPGNLLLTTGGTLKISALGVA 156
Query: 453 NEI-------------AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVD 499
+ ++++ GV L+ + TG P+ D
Sbjct: 157 EALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD 216
Query: 500 NGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDI 557
N + + G + P LS +L+K + +P KR ++R I
Sbjct: 217 N--IYKLFENIGKGSYAIPGDCGPPLS-----------DLLKGMLEYEPAKRFSIRQI 261
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 88 RLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 142
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 254
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 255 ----VYMIMVKCWMIDADSRPKFREL 276
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 84 RLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 138
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 250
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 251 ----VYMIMVKCWMIDADSRPKFREL 272
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/83 (20%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 478 NVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS-SFDEEQLETL 536
+V++ G +L+ M G+ P+ ++ + L +DP F + + L
Sbjct: 249 DVWSLGCILYYMTYGKTPF-----------QQIINQISKLHAIIDPNHEIEFPDIPEKDL 297
Query: 537 GELIKSCVRADPEKRPTMRDIAA 559
+++K C++ DP++R ++ ++ A
Sbjct: 298 QDVLKCCLKRDPKQRISIPELLA 320
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 346 FRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI--HIKESEHLD-W 402
F ++I+ L + H N V G C ++ EY P G+L +++ H + +H+
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLL 120
Query: 403 GMRLRIAMGMAY 414
+I GM Y
Sbjct: 121 QYTSQICKGMEY 132
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/83 (20%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 478 NVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS-SFDEEQLETL 536
+V++ G +L+ M G+ P+ ++ + L +DP F + + L
Sbjct: 249 DVWSLGCILYYMTYGKTPF-----------QQIINQISKLHAIIDPNHEIEFPDIPEKDL 297
Query: 537 GELIKSCVRADPEKRPTMRDIAA 559
+++K C++ DP++R ++ ++ A
Sbjct: 298 QDVLKCCLKRDPKQRISIPELLA 320
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 301 DFSNVIGSSPIGTVYKGTL----SNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKV 356
+F V+GS G V T GV I D + + K+ T
Sbjct: 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMT-QLG 106
Query: 357 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIK 395
+H+N VNL+G C P ++FEY G L ++ K
Sbjct: 107 SHENIVNLLGACTLSGPI--YLIFEYCCYGDLLNYLRSK 143
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 44/120 (36%), Gaps = 11/120 (9%)
Query: 343 EVQFRKKIDTLSKVNHKNFVNL-----IGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKES 397
EV F KK+ H N V IG E + ++ G L E + ES
Sbjct: 75 EVCFMKKLS-----GHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMES 129
Query: 398 EH-LDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 456
L L+I ++HMH+ PPI H L + L+ KL D I+
Sbjct: 130 RGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS 189
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 88 RLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 142
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 254
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 255 ----VYMIMVKCWMIDADSRPKFREL 276
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 83 RLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 137
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 249
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 250 ----VYMIMVKCWMIDADSRPKFREL 271
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 115 RLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 169
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 170 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 229
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 230 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 281
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 282 ----VYMIMVKCWMIDADSRPKFREL 303
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 63/171 (36%), Gaps = 17/171 (9%)
Query: 339 PKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESE 398
P+ Q ++I L K++H N V L+ ++ MVFE G + E +K
Sbjct: 76 PRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP-- 133
Query: 399 HLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 458
L + +E++H I H + S + + ED K++D NE +
Sbjct: 134 -LSEDQARFYFQDLIKGIEYLHYQK--IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS 190
Query: 459 E------------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYL 497
+ M +V+ GV L+ V G+ P++
Sbjct: 191 DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM 241
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 81 RLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 135
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 247
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 248 ----VYMIMVKCWMIDADSRPKFREL 269
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 81 RLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 135
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 247
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 248 ----VYMIMVKCWMIDADSRPKFREL 269
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 84 RLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 138
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 250
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 251 ----VYMIMVKCWMIDADSRPKFREL 272
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 75 RLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 129
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 130 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 189
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 190 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 241
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 242 ----VYMIMVKCWMIDADSRPKFREL 263
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 87 RLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 141
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 142 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 201
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 202 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 253
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 254 ----VYMIMVKCWMIDADSRPKFREL 275
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 478 NVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLETLG 537
+++N G++ + ++T P++ ED YL+ Q + + T SS QL T
Sbjct: 215 DMWNIGIIAYMLLTHTSPFVG-----EDNQETYLNISQVNVDYSEETFSSVS--QLAT-- 265
Query: 538 ELIKSCVRADPEKRPT 553
+ I+S + +PEKRPT
Sbjct: 266 DFIQSLLVKNPEKRPT 281
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 106 RLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 160
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 161 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 220
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 221 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 272
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 273 ----VYMIMVKCWMIDADSRPKFREL 294
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 81 RLLGICLTS---TVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 135
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 247
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 248 ----VYMIMVKCWMIDADSRPKFREL 269
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+GS GTVYKG + G ++ + + + ++ V++ +
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 78 RLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAEGMNYLED 132
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 133 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 192
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 193 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 244
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 245 ----VYMIMVKCWMIDADSRPKFREL 266
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 348 KKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGM--- 404
++I L ++ H+N VNL+ C++++ + +VFE+ + T+ + + + + LD+ +
Sbjct: 73 REIKLLKQLRHENLVNLLEVCKKKKRWY--LVFEFV-DHTILDDLELFPN-GLDYQVVQK 128
Query: 405 -RLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 456
+I G+ +C H H I H + + +++ KL D F +A
Sbjct: 129 YLFQIINGIGFC--HSHN----IIHRDIKPENILVSQSGVVKLCDFGFARTLA 175
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 340 KNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHI 392
+ +E Q R++I+ + ++H N + L + + ++ EYAP G L++ +
Sbjct: 64 EGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRI--YLILEYAPRGELYKEL 114
>pdb|1VC2|A Chain A, Crystal Structure Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Thermus Thermophilus Hb8
Length = 331
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 523 PTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITPDG 571
P +DEE L G+ I++ DP + P + ++ E TG+ DG
Sbjct: 52 PGAVGYDEENLYVDGKAIRATAIKDPREIPWKQAGVGVVVESTGVFTDG 100
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 105/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+ S GTVYKG + G ++ + + + ++ V++ +
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 88 RLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 142
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 254
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 255 ----VYMIMVKCWMIDADSRPKFREL 276
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 31/88 (35%)
Query: 35 NSFSGIIPXXXXXXXXXXXXXXXHNNFSGPLPNDLGINHSLTILLLDNNDFVGSLSPEIY 94
N+ G IP H N SG +P+ L +L L N G+L P I
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 95 KLQVLSESQVDEGQLSSAAKKEQSCYER 122
L L D ++S A + +
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFSK 174
Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 13 LEGTLAPEIQSLTHIKSIILRNNSFSGIIP 42
L GTL P I SL ++ I N SG IP
Sbjct: 137 LSGTLPPSISSLPNLVGITFDGNRISGAIP 166
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 105/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+ S GTVYKG + G ++ + + + ++ V++ +
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 88 RLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 142
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 254
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 255 ----VYMIMVKCWMIDADSRPKFREL 276
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 105/266 (39%), Gaps = 29/266 (10%)
Query: 304 NVIGSSPIGTVYKGT-LSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFV 362
V+ S GTVYKG + G ++ + + + ++ V++ +
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 363 NLIGFCEEEEPFTRMMVFEYAPNGTLFEHI-----HIKESEHLDWGMRLRIAMGMAYCLE 417
L+G C T ++ + P G L +++ +I L+W ++IA GM Y +
Sbjct: 81 RLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMNYLED 135
Query: 418 HMHQLNPPIAHNYLNSSAVH--LTEDYAAKL---SDLSFWNEIAMAEMXXXXXXXXXXXX 472
A N L + H +T+ AKL + + E +
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 473 XXXXXNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 531
+V+++GV ++E++T G PY +G A++ S ++ ++ P + + D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPY---DGIP---ASEISSILEKGERLPQPPICTID-- 247
Query: 532 QLETLGELIKSCVRADPEKRPTMRDI 557
+ ++ C D + RP R++
Sbjct: 248 ----VYMIMVKCWMIDADSRPKFREL 269
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,830,405
Number of Sequences: 62578
Number of extensions: 493538
Number of successful extensions: 1973
Number of sequences better than 100.0: 328
Number of HSP's better than 100.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 226
Number of HSP's that attempted gapping in prelim test: 1569
Number of HSP's gapped (non-prelim): 469
length of query: 592
length of database: 14,973,337
effective HSP length: 104
effective length of query: 488
effective length of database: 8,465,225
effective search space: 4131029800
effective search space used: 4131029800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)