BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>007713
MPSTANVGPQEMPRPLEPINLLAARNERESVQIALRPKVSWSSSSTAGVVQVQCSDLCSA
SGDRLVVGQSLMLRRVVPMLGVPDALVPLDLPVCQISLIPGETTAVWVSIDAPYAQPPGL
YEGEIIITSKADTELSSQCLGKGEKHRLFMELRNCLDNVEPIEGKPLHEVVERAKSTATT
LRRVIFSPLFSEFFSDNGPIDMMDEDAISNLSVRVKLSLTVWDFILPATPSLPAVIGISD
TVIEDRFGVRHGSDEWYEALDQHFKWLLQYRISPFFCRWGESMRVLTYTCPWPADHPKSD
EYFSDPRLAAYAVPYSPVLSSNDGAKDYVRKEIELLRTKAHWKKAYFYLWDEPLNMEHYS
SVRNMASELHAYAPDARVLTTYYCGPSDAPLGPTPFESFVKVPKFLRPHTQIYCTSEWVL
GNREDLVKDIVTELQPENGEEWWTYVCMGPSDPHPNWHLGMRGSQHRAVMWRVWKEGGTG
FLYWGANCYEKATVPSAEIRFRRGLPPGDGVLFYPGEVFSSSRQPVASLRLERILSGLQD
IEYLNLYASRYGRDEGLALLEKTGTYQGPERYTIEHLPIDVMRGEIFNACRH

High Scoring Gene Products

Symbol, full name Information P value
AT1G45150 protein from Arabidopsis thaliana 9.6e-263

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  007713
        (592 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2028275 - symbol:AT1G45150 "AT1G45150" species...  2528  9.6e-263  1


>TAIR|locus:2028275 [details] [associations]
            symbol:AT1G45150 "AT1G45150" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=RCA] EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:BT008320 EMBL:AK227318
            IPI:IPI00523041 RefSeq:NP_175129.3 UniGene:At.38729 PaxDb:Q7Y231
            PRIDE:Q7Y231 ProMEX:Q7Y231 EnsemblPlants:AT1G45150.1 GeneID:841083
            KEGG:ath:AT1G45150 TAIR:At1g45150 eggNOG:NOG119415
            HOGENOM:HOG000005660 InParanoid:Q7Y231 OMA:ENGEEWW PhylomeDB:Q7Y231
            ProtClustDB:CLSN2680742 Genevestigator:Q7Y231 InterPro:IPR025150
            Pfam:PF13320 Uniprot:Q7Y231
        Length = 643

 Score = 2528 (895.0 bits), Expect = 9.6e-263, P = 9.6e-263
 Identities = 453/592 (76%), Positives = 518/592 (87%)

Query:     1 MPSTANVGPQEMPRPLEPINLLAARNERESVQIALRPKVSWSSSSTAGVVQVQCSDLCSA 60
             MP+T NVG QE PR LEPINLLAARNERES QIA+RPKVSW++SS +G+VQVQCSDLCS+
Sbjct:    51 MPNTVNVGSQETPRALEPINLLAARNERESFQIAMRPKVSWAASSPSGIVQVQCSDLCSS 110

Query:    61 SGDRLVVGQSLMLRRVVPMLGVPDALVPLDLPVCQISLIPGETTAVWVSIDAPYAQPPGL 120
             +GDRLVVGQSL LRRVVP+LGVPDALVPLDLPV Q+SL PGET+ +WVSID P  QPPG 
Sbjct:   111 AGDRLVVGQSLKLRRVVPVLGVPDALVPLDLPVSQLSLFPGETSVIWVSIDVPTGQPPGQ 170

Query:   121 YEGEIIITS-KADTELSSQCLGKGEKHRLFMELRNCLDNVEPIEGKPLHEVVERAKSTAT 179
             YEGEIII++ K D   SS  L K EK +L +EL  CLD +EPIEGKP+ EVVER K  ++
Sbjct:   171 YEGEIIISAMKTDGGGSSH-LAKHEKDQLCVELNTCLDIMEPIEGKPMDEVVERIKCASS 229

Query:   180 TLRRVIFSPLFSEFFSDNGPIDMMDEDAISNLSVRVKLSLTVWDFILPATPSLPAVIGIS 239
             +LRR++FSP FSEF S NG  DMM+ED +SNLS+R+KL LTVW+FI+P TPSLPAVIG+S
Sbjct:   230 SLRRILFSPSFSEFISTNGSTDMMEEDVVSNLSLRIKLRLTVWEFIIPVTPSLPAVIGVS 289

Query:   240 DTVIEDRFGVRHGSDEWYEALDQHFKWLLQYRISPFFCRWGESMRVLTYTCPWPADHPKS 299
             DTVIEDRF V HGS++WY+ LD HFKWLLQYRISP+FC+WGESMRVLTYT PWPADHPKS
Sbjct:   290 DTVIEDRFAVEHGSEDWYKKLDLHFKWLLQYRISPYFCKWGESMRVLTYTSPWPADHPKS 349

Query:   300 DEYFSDPRLAAYAVPYSPVLSSNDGAKDYVRKEIELLRTKAHWKKAYFYLWDEPLNMEHY 359
             DEY SD RLAAYAVPY  V++ +D  + Y+RKE+E+LR+K HW KAYFYLWDEPLNMEH+
Sbjct:   350 DEYLSDSRLAAYAVPYRQVIAGDDSRESYLRKEVEILRSKPHWNKAYFYLWDEPLNMEHF 409

Query:   360 SSVRNMASELHAYAPDARVLTTYYCGPSDAPLGPTPFESFVKVPKFLRPHTQIYCTSEWV 419
              +VR MASE++AYAPD+RVLTTYYCGP DAPL PTPFESFVKVP  LRP+TQIYCTSEWV
Sbjct:   410 DNVRKMASEIYAYAPDSRVLTTYYCGPGDAPLAPTPFESFVKVPNLLRPYTQIYCTSEWV 469

Query:   420 LGNREDLVKDIVTELQPENGEEWWTYVCMGPSDPHPNWHLGMRGSQHRAVMWRVWKEGGT 479
             LGNREDLVKDI+ ELQ ENGEEWWTY+C+GPSDPHPNWHLGMRG+Q RAVMWRVWKEGGT
Sbjct:   470 LGNREDLVKDILDELQTENGEEWWTYICLGPSDPHPNWHLGMRGTQQRAVMWRVWKEGGT 529

Query:   480 GFLYWGANCYEKATVPSAEIRFRRGLPPGDGVLFYPGEVFSSSRQPVASLRLERILSGLQ 539
             GFLYWGANCYEKATVPSAE++FRRGLPPGDGVL+YPGEVFSSS +PVASLRLER+LSGLQ
Sbjct:   530 GFLYWGANCYEKATVPSAEVKFRRGLPPGDGVLYYPGEVFSSSSEPVASLRLERLLSGLQ 589

Query:   540 DIEYLNLYASRYGRDEGLALLEKTGTYQGPERYTIEHLPIDVMRGEIFNACR 591
             D EYL LY S+YGR+E + LLEKTG Y GPERYT+EH PIDV+RGE++N CR
Sbjct:   590 DYEYLKLYESKYGREEAMGLLEKTGVYTGPERYTLEHRPIDVLRGEVYNTCR 641


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.137   0.434    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      592       592   0.00084  120 3  11 22  0.40    34
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  630 (67 KB)
  Total size of DFA:  388 KB (2188 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  48.32u 0.10s 48.42t   Elapsed:  00:00:02
  Total cpu time:  48.32u 0.10s 48.42t   Elapsed:  00:00:02
  Start:  Fri May 10 11:13:36 2013   End:  Fri May 10 11:13:38 2013

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