estExt_fgenesh4_pg.C_1450059 protein (Populus trichocarpa)

STRING 9.05

estExt_fgenesh4_pg.C_1450059 protein (Populus trichocarpa) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	estExt_fgenesh4_pg.C_1450059	phenylalanine-tRNA ligase (EC-6.1.1.20) (596 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pg.C_LG_IX0484	phenylalanyl-tRNA synthetase alpha chain (EC-6.1.1.20) (484 aa)	•	•	•	•	•	•	0.992
	estExt_Genewise1_v1.C_LG_IX0414	SubName- Full=Putative uncharacterized protein; (404 aa)	•		•			•	0.705
	gw1.88.24.1	methionyl-tRNA synthetase (EC-6.1.1.10) (801 aa)			•			•	0.677
	estExt_fgenesh4_pg.C_LG_I2429	methionyl-tRNA synthetase (EC-6.1.1.10) (805 aa)			•			•	0.655
	eugene3.00880022	RecName- Full=Adenosylhomocysteinase; EC=3.3.1.1; (485 aa)			•			•	0.638
	estExt_Genewise1_v1.C_LG_I3343	adenosylhomocysteinase/s-adenosyl-l-homocysteine hydrolase (EC-3.3.1.1) (485 aa)			•			•	0.633
	gw1.XVI.1998.1	SubName- Full=Putative uncharacterized protein; (204 aa)			•			•	0.525
	fgenesh4_pg.C_scaffold_66000196	homoserine kinase (EC-2.7.1.39) (366 aa)	•					•	0.515
	eugene3.00061162	SubName- Full=Putative uncharacterized protein; (208 aa)			•			•	0.512
	estExt_Genewise1_v1.C_LG_II3255	arginine-tRNA ligase (EC-6.1.1.19) (590 aa)			•			•	0.496

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes

Server load: low (25%)

Permalink