BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007714
(592 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SGE9|SYFB_ARATH Probable phenylalanine--tRNA ligase beta subunit OS=Arabidopsis
thaliana GN=At1g72550 PE=2 SV=1
Length = 598
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/599 (74%), Positives = 522/599 (87%), Gaps = 8/599 (1%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MPT+SVGRDRLFAALG+SYT+E+FE+LCF FGIELDDVTTEKAIIRKEKH+DEE D++ E
Sbjct: 1 MPTISVGRDRLFAALGESYTQEKFEELCFSFGIELDDVTTEKAIIRKEKHIDEEADDD-E 59
Query: 61 EVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSIR 120
E+IYKIE+PANR DLLCLEG+AQ+LRVF ++QEIP YTL+D+SKD +LQM+VKPETS IR
Sbjct: 60 EIIYKIEIPANRPDLLCLEGLAQSLRVFIEKQEIPTYTLADISKDKILQMNVKPETSKIR 119
Query: 121 PYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPP 180
P+VVCAVLR ++FDEA YNSFIDLQDKLHQNICRRR+LVAIGTHDLDTLQGPFTYEALPP
Sbjct: 120 PFVVCAVLRGVTFDEARYNSFIDLQDKLHQNICRRRSLVAIGTHDLDTLQGPFTYEALPP 179
Query: 181 SHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIIN 240
+ INFVPLKQT+ F ADEL+EFYKSD+KLKK+LHIIENSP++PVLYD RTVLSLPPIIN
Sbjct: 180 TDINFVPLKQTKSFRADELIEFYKSDMKLKKFLHIIENSPVFPVLYDSKRTVLSLPPIIN 239
Query: 241 GAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSYV 300
GAHSAITL+TKNVFIECTATDLTKAKIVLNTMVT FSE+C RK+++EPVEV Y DG+SY+
Sbjct: 240 GAHSAITLQTKNVFIECTATDLTKAKIVLNTMVTTFSEFCARKFEIEPVEVTYDDGKSYI 299
Query: 301 YPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTR 360
YPDL+ Y+MEV LS+I +IGVSL+ E+VTSLL RMQL AE++ S +NQ I V VPP+R
Sbjct: 300 YPDLAVYDMEVPLSFITDSIGVSLKVEQVTSLLTRMQLQAEQAKSSDNQCAIKVHVPPSR 359
Query: 361 SDVLHPCDVMEDVAIAYGYNNIPKRKPASVKPLALNEFSDLMRLEIAMNGFTEVLTWILC 420
SDVLHPCDVMEDVAIAYG+NNIP RKPAS+KPL LNE +DL+R+EIAM +TEV+TW+LC
Sbjct: 360 SDVLHPCDVMEDVAIAYGFNNIPTRKPASIKPLTLNELTDLLRIEIAMCVYTEVVTWLLC 419
Query: 421 SSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIKIYEVGD 480
S KE MLNR+ S +VGNPR++DFE +R LMPG+LKT+GHN +PKPIKI+E+ D
Sbjct: 420 SHKENFAMLNREDVNSAVIVGNPRSADFEAMRRALMPGLLKTVGHNNKYPKPIKIFEISD 479
Query: 481 VVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPF-------VPVGDD 533
VV+LDE KDVGAS RR LAALYCGA SGFELIH LVDRIMEV+ PF VP+ +
Sbjct: 480 VVMLDESKDVGASNRRHLAALYCGATSGFELIHGLVDRIMEVMAIPFLTIHENNVPINEK 539
Query: 534 TGYYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDIENFL 592
GYY++ S EPEFLPGRQASI +GKH+G FGIVHPEVLNNFDI DPCS++E+DIE L
Sbjct: 540 DGYYVKLSQEPEFLPGRQASIIVRGKHIGNFGIVHPEVLNNFDIPDPCSYLELDIEAIL 598
>sp|Q9VCA5|SYFB_DROME Probable phenylalanine--tRNA ligase beta subunit OS=Drosophila
melanogaster GN=CG5706 PE=2 SV=1
Length = 589
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/596 (52%), Positives = 420/596 (70%), Gaps = 11/596 (1%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MPT+ V RD LF ALGK+YT +EF+DLCF FG+ELD+VTTEK ++ KE+ E
Sbjct: 1 MPTIGVKRDLLFEALGKTYTDDEFQDLCFAFGLELDEVTTEKQMLTKEQGDVAAAANASE 60
Query: 61 EVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSIR 120
E+IY+I++PANRYDLLCLEG+ L VF + + PK+ +++K +L+ + P T+ IR
Sbjct: 61 EIIYRIDIPANRYDLLCLEGLVTGLLVFQGKLKPPKFQFVELAKRQVLK--IDPSTAQIR 118
Query: 121 PYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPP 180
PY V AVLR+++F +ASYNSFIDLQDKLHQNICR+RTLVAIGTHDLDTLQGPF+YEAL P
Sbjct: 119 PYAVAAVLRNVTFTQASYNSFIDLQDKLHQNICRKRTLVAIGTHDLDTLQGPFSYEALAP 178
Query: 181 SHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIIN 240
I F PL QT++ T ELM+FY + +LK+YL II SP+YPV+YD NR VLSLPPIIN
Sbjct: 179 DQIKFKPLNQTKEMTGSELMDFYSTHAQLKQYLPIIRESPVYPVIYDANRVVLSLPPIIN 238
Query: 241 GAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSYV 300
G HS ITLKTKNVFIECTATD TKAK+VL+T+V +FSE+C +K+ VEP +VV DG
Sbjct: 239 GDHSKITLKTKNVFIECTATDRTKAKVVLDTIVCLFSEHCAQKFTVEPCDVVQPDGSVIS 298
Query: 301 YPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTR 360
YP+L +S+ N IG+ AE++ +L RM L A+ ++ V +PPTR
Sbjct: 299 YPELEVREERISVKRANAYIGIDEPAEKLADMLTRMYLEAKVDGD-----SLVVKIPPTR 353
Query: 361 SDVLHPCDVMEDVAIAYGYNNIPKRKPASV---KPLALNEFSDLMRLEIAMNGFTEVLTW 417
DV+H CD+ EDVAIAYGYNNI K PA + K LN+ ++ +R ++A GFTE LT+
Sbjct: 354 HDVIHACDIYEDVAIAYGYNNIKKSLPAFMQIAKQFPLNKLTEQLREQVAQAGFTEALTF 413
Query: 418 ILCSSKEISTMLNRQTDESTAV-VGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIKIY 476
LCS +I LN+ D AV +GNP+T +F+VVRTTL+PG+LKT+ N+ P P+K++
Sbjct: 414 TLCSRDDIGRKLNKNIDALPAVHIGNPKTLEFQVVRTTLLPGLLKTLVANRKMPLPLKLF 473
Query: 477 EVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDDTGY 536
E+ DVV+ DE +VGA RR+ A+ C +GFE++H L+DR+M+++ P+ GY
Sbjct: 474 EISDVVVADESTEVGARNERRVCAVNCNKTAGFEVVHGLLDRVMQLLSVPWKSASGTKGY 533
Query: 537 YIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDIENFL 592
Y+Q +++P + PGR A++ + G +G G++HP VL F+++ PCS +E IE F+
Sbjct: 534 YLQATEDPSYFPGRCANVMYDGVVIGKIGVLHPTVLQAFELTTPCSAVEFTIEPFV 589
>sp|Q9NSD9|SYFB_HUMAN Phenylalanine--tRNA ligase beta subunit OS=Homo sapiens GN=FARSB
PE=1 SV=3
Length = 589
Score = 612 bits (1579), Expect = e-174, Method: Compositional matrix adjust.
Identities = 304/597 (50%), Positives = 414/597 (69%), Gaps = 13/597 (2%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MPTVSV RD LF ALG++YT EEF++LCF FG+ELD++T+EK II KE+ + +D
Sbjct: 1 MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAAGASDV 60
Query: 61 EVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQ-MHVKPETSSI 119
V+YKI+VPANRYDLLCLEG+ + L+VF ++ + P Y V D +Q + + ET+ I
Sbjct: 61 -VLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPVY--KRVMPDGKIQKLIITEETAKI 117
Query: 120 RPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALP 179
RP+ V AVLR+I F + Y+SFI+LQ+KLHQNICR+R LVAIGTHDLDTL GPFTY A
Sbjct: 118 RPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKR 177
Query: 180 PSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPII 239
PS I F PL +T+++TA ELM YK+D LK YLHIIEN PLYPV+YD N VLS+PPII
Sbjct: 178 PSDIKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPII 237
Query: 240 NGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSY 299
NG HS IT+ T+N+FIECT TD TKAKIVL+ +VT+FSEYC+ ++ VE EVV+ +G+S+
Sbjct: 238 NGDHSRITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSH 297
Query: 300 VYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPT 359
+P+L+ V IN +G+ E + LL RM L +E GN I + +PPT
Sbjct: 298 TFPELAYRKEMVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGN---QIEIEIPPT 354
Query: 360 RSDVLHPCDVMEDVAIAYGYNNIPKRKPAS---VKPLALNEFSDLMRLEIAMNGFTEVLT 416
R+D++H CD++ED AIAYGYNNI P + LN+ ++L+R ++A GFTE LT
Sbjct: 355 RADIIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALT 414
Query: 417 WILCSSKEISTMLNRQTDESTAV-VGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIKI 475
+ LCS ++I+ L + AV + NP+T++F+V RTTL+PG+LKTI N+ P P+K+
Sbjct: 415 FALCSQEDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKL 474
Query: 476 YEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDDTG 535
+E+ D+V+ D DVGA R L A+Y N GFE+IH L+DRIM+++ P P D G
Sbjct: 475 FEISDIVIKDSNTDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVP--PGEDKGG 532
Query: 536 YYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDIENFL 592
Y I+ S+ P F PGR A I +G+ VG G++HP+V+ F+++ PCS +EI++ FL
Sbjct: 533 YVIKASEGPAFFPGRCAEIFARGQSVGKLGVLHPDVITKFELTMPCSSLEINVGPFL 589
>sp|Q5R7F7|SYFB_PONAB Phenylalanine--tRNA ligase beta subunit OS=Pongo abelii GN=FARSB
PE=2 SV=1
Length = 589
Score = 607 bits (1564), Expect = e-172, Method: Compositional matrix adjust.
Identities = 302/597 (50%), Positives = 414/597 (69%), Gaps = 13/597 (2%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MPTVSV RD LF ALG++YT EEF++LCF FG+ELD++T+EK II KE+ + +D
Sbjct: 1 MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAAGASDV 60
Query: 61 EVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQ-MHVKPETSSI 119
V+YKI+VPANRYDLLCLEG+ + L+VF ++ + P Y V D +Q + + ET+ I
Sbjct: 61 -VLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPVY--KRVMPDGKIQKLIITEETAKI 117
Query: 120 RPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALP 179
RP+ V AVLR+I F + Y+SFI+LQ+KLHQNICR+R LVAIGTHDLDTL GPFTY A
Sbjct: 118 RPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKR 177
Query: 180 PSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPII 239
PS I F PL +T+++TA ELM YK+D LK YLHIIEN PLYPV+YD N VLS+PPII
Sbjct: 178 PSDIKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPII 237
Query: 240 NGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSY 299
NG HS IT+ T+N+FIECT TD TKAKIVL+ +VT+FSEYC+ ++ VE EVV+ +G+S+
Sbjct: 238 NGDHSRITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSH 297
Query: 300 VYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPT 359
+P+L+ V IN +G+ E + LL RM L +E GN I + +PPT
Sbjct: 298 TFPELAYRKEMVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGN---QIEIEIPPT 354
Query: 360 RSDVLHPCDVMEDVAIAYGYNNIPKRKPAS---VKPLALNEFSDLMRLEIAMNGFTEVLT 416
R+D++H CD++ED AIAYGY+NI P + LN+ ++L+R ++A GFTE LT
Sbjct: 355 RADIIHACDIVEDAAIAYGYSNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALT 414
Query: 417 WILCSSKEISTMLNRQTDESTAV-VGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIKI 475
+ LCS ++I+ L + AV + +P+T++F+V RTTL+PG+LKTI N+ P P+K+
Sbjct: 415 FALCSQEDIADKLGVDISATKAVHISSPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKL 474
Query: 476 YEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDDTG 535
+E+ D+V+ D DVGA R L A+Y N GFE+IH L+DRIM+++ +P D G
Sbjct: 475 FEISDIVIKDSNTDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDV--LPGEDKGG 532
Query: 536 YYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDIENFL 592
Y I+ S+ P F PGR A I +G+ VG G++HP+V+ F+++ PCS +EI+I FL
Sbjct: 533 YVIKASEGPAFFPGRCAEIFARGQSVGKLGVLHPDVITKFELTMPCSSLEINIGPFL 589
>sp|Q9WUA2|SYFB_MOUSE Phenylalanine--tRNA ligase beta subunit OS=Mus musculus GN=Farsb
PE=2 SV=2
Length = 589
Score = 605 bits (1559), Expect = e-172, Method: Compositional matrix adjust.
Identities = 304/597 (50%), Positives = 412/597 (69%), Gaps = 13/597 (2%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEK-HLDEEGDEND 59
MPTVSV RD LF ALG++YT EEF++LCF FG+ELD++T+EK II KE+ H +G
Sbjct: 1 MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKQIISKEQGHGKAQG--AS 58
Query: 60 EEVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSI 119
+ V+YKI+VPANRYDLLCLEG+A+ L+VF ++ + P Y + K + ++ + ET+ +
Sbjct: 59 DVVLYKIDVPANRYDLLCLEGLARGLQVFKERIKAPVYK-RVMPKGDIQKLVITEETAKV 117
Query: 120 RPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALP 179
RP+ V AVLR+I F + Y+SFI+LQ+KLHQNICR+R LVAIGTHDLDTL GPFTY A
Sbjct: 118 RPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKR 177
Query: 180 PSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPII 239
PS I F PL +T+++TA ELM YK+D LK YLHIIE+ PLYPV+YD N VLS+PPII
Sbjct: 178 PSDIKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIESKPLYPVIYDSNGVVLSMPPII 237
Query: 240 NGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSY 299
NG HS IT+ T+N+FIECT TD TKAKIVL+ +VT+FSE+C+ ++ VE VEVV +G+S
Sbjct: 238 NGNHSKITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEHCENQFTVEAVEVVSPNGKSS 297
Query: 300 VYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPT 359
+P+L V IN +G+ + LL RM L +E GN I V +PPT
Sbjct: 298 TFPELPYRKEMVRADLINKKVGIRETPANLAKLLTRMCLKSEVIGDGN---QIEVEIPPT 354
Query: 360 RSDVLHPCDVMEDVAIAYGYNNIPKRKPAS---VKPLALNEFSDLMRLEIAMNGFTEVLT 416
R+DV+H CD++ED AIAYGYNNI P + LN+ ++L+RL++A GFTE LT
Sbjct: 355 RADVIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRLDMAAAGFTEALT 414
Query: 417 WILCSSKEISTMLNRQTDESTAV-VGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIKI 475
+ LCS ++I+ L + AV + NP+T++F+V RTTL+PG+LKTI N+ P P+K+
Sbjct: 415 FALCSQEDIADKLGLDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKL 474
Query: 476 YEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDDTG 535
+E+ DVV+ D KDVGA R L A+Y GFE+IH L+DRIM+++ P P + G
Sbjct: 475 FEISDVVVKDSGKDVGAKNYRHLCAVYYNKTPGFEIIHGLLDRIMQLLDVP--PGEESGG 532
Query: 536 YYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDIENFL 592
Y I+ S F PGR A I G+ +G G++HP+V+ F+++ PCS +EI+IE FL
Sbjct: 533 YMIKASAGSAFFPGRCAEIFVGGQSIGKLGVLHPDVITKFELTMPCSSLEINIEPFL 589
>sp|Q19713|SYFB_CAEEL Phenylalanine--tRNA ligase beta subunit OS=Caenorhabditis elegans
GN=frs-2 PE=1 SV=2
Length = 591
Score = 595 bits (1535), Expect = e-169, Method: Compositional matrix adjust.
Identities = 300/598 (50%), Positives = 414/598 (69%), Gaps = 13/598 (2%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MPTV + + L + Y+++EF++LCF +G+ELD++T+EKA + KE+ D ND+
Sbjct: 1 MPTVGIKKVILDKHFKRVYSEKEFDELCFEYGLELDEITSEKAAVEKEQGTRAASDLNDQ 60
Query: 61 EVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSIR 120
EV YKI++PANRYDLL +EG+A+A+R+F ++ P Y +DV K + ++ VK ET+ +R
Sbjct: 61 EV-YKIDIPANRYDLLSVEGLARAIRIFKQEIPSPAYKYADVPKTGLQKIIVKKETAQVR 119
Query: 121 PYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPP 180
P+VV AVLRDISFD SY SFIDLQDKLHQNICR+RTLVAIGTHDLDT+QGPF Y A P
Sbjct: 120 PFVVGAVLRDISFDADSYASFIDLQDKLHQNICRKRTLVAIGTHDLDTIQGPFEYRAEAP 179
Query: 181 SHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIIN 240
I F PL QT+++TA+ELM Y +D LK YL II+N P+YPV+YD+N V S+PPIIN
Sbjct: 180 KDIKFKPLNQTKEYTAEELMTLYSTDSHLKAYLPIIQNHPVYPVIYDKNGVVCSMPPIIN 239
Query: 241 GAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYAD-GRSY 299
G HS ITL TKNVFIE TATD KA +VL+T+VT+FS+YC + + +E VEVVY + G
Sbjct: 240 GEHSKITLNTKNVFIEATATDKQKAFVVLDTIVTLFSQYCAKPFTIEQVEVVYEETGVKE 299
Query: 300 VYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPT 359
+YP LS M V+ IN IG++L+ EE+ +LLN+M L AE +A + + ++VPPT
Sbjct: 300 LYPLLSYREMTVTTPEINTKIGINLKDEEMATLLNKMSLKAEVAA----KETLKIVVPPT 355
Query: 360 RSDVLHPCDVMEDVAIAYGYNNIPKRKPAS---VKPLALNEFSDLMRLEIAMNGFTEVLT 416
R D+LH CD+ EDV +A+GYNN+ + P S +N+ D +R+EIA G+TE L
Sbjct: 356 RHDILHACDIAEDVGVAFGYNNLITKLPESNTVAVAFPINKLCDNLRIEIAAAGWTEALN 415
Query: 417 WILCSSKEISTMLNRQTDESTAV-VGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIKI 475
+ LCS +IS+ L + S AV +GNP+T +F+V RT+L+PG+LKT+ N+D P P+K+
Sbjct: 416 FALCSRDDISSKLRQPDALSHAVHIGNPKTLEFQVARTSLLPGLLKTLSSNRDMPLPLKL 475
Query: 476 YEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDDTG 535
+E+ DV++ D DVGA RRLAA+Y +GFE+I +DRIM ++ P D TG
Sbjct: 476 FELQDVIVKDSNTDVGARNERRLAAVYYNRAAGFEIIQGFLDRIMRMLNVN--PARDGTG 533
Query: 536 YYIQRSDEPEFLPGRQASITH-KGKHVGTFGIVHPEVLNNFDISDPCSFMEIDIENFL 592
YYI+ + + PGR A I KG +G G +HPEV+ +F ++ PC +EI++E FL
Sbjct: 534 YYIEADENSTYFPGRCAKIIGPKGVVLGHIGALHPEVITSFGLTLPCGAVEINVEPFL 591
>sp|Q550D2|SYFB_DICDI Phenylalanine--tRNA ligase beta subunit OS=Dictyostelium discoideum
GN=phesB PE=3 SV=2
Length = 617
Score = 562 bits (1448), Expect = e-159, Method: Compositional matrix adjust.
Identities = 289/611 (47%), Positives = 414/611 (67%), Gaps = 31/611 (5%)
Query: 1 MPTVSVGRDRLFAALG---KSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDE 57
MP V++ RD L+ ALG K+YT+E+FEDLCF FG+ELD+VT+E+ + + E +++
Sbjct: 1 MPKVNINRDILYKALGFYIKTYTQEQFEDLCFAFGVELDEVTSEREMKKNETGVEDLTVS 60
Query: 58 NDEEVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKPETS 117
+D VIYKI+V ANRYDLLCLEGIA+AL V+N + IPKY + K+S ++++ E
Sbjct: 61 DD--VIYKIDVSANRYDLLCLEGIARALNVYNHKASIPKYQIVP-PKNSHEKLYISKEVE 117
Query: 118 SIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEA 177
S+RP +V +LRDI+F + SY+SFIDLQ+KLH NIC++R+LV+IGTHDLDTL GPF Y+A
Sbjct: 118 SVRPVIVAGILRDITFTQESYDSFIDLQEKLHANICKKRSLVSIGTHDLDTLSGPFYYKA 177
Query: 178 LPPSHINFVPLKQTRDFTADELMEFY-KSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLP 236
L P I FVPL QT+++ A+EL +FY +S LKK+L II++SP+YPV+YD V SLP
Sbjct: 178 LAPKDIKFVPLSQTKEYNAEELFKFYDESSSHLKKFLPIIKDSPVYPVIYDSKNVVCSLP 237
Query: 237 PIINGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADG 296
PIING HS I L TKNVFIE TA D TKA IVLNTM+T+FSEYCK+ + +E VEV+ ADG
Sbjct: 238 PIINGEHSKIKLSTKNVFIEVTANDRTKANIVLNTMLTMFSEYCKQPFTMEQVEVIDADG 297
Query: 297 RSY-VYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVL 355
+S +YP + + + YIN + G+++ ++ +LL RM L ++ S +++ +I V
Sbjct: 298 KSTGLYPQIQEKQINAQVDYINKSAGINITPNDMVTLLKRMSLQSKLS---DDEKSIIVD 354
Query: 356 VPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKP-----ASVKPLALNEFSDLMRLEIAMNG 410
VP TRSD++H CD+MEDVAI YGY+N+ K P V+P +N+ S+L+ EIA+ G
Sbjct: 355 VPVTRSDIMHACDIMEDVAIGYGYDNLKKEIPNCNTIGRVQP--INKLSELLANEIALAG 412
Query: 411 FTEVLTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHP 470
FTE++T++LC +++ T LN+ D S+ + N + +F VRT L+ +LK++ NK P
Sbjct: 413 FTEIMTFVLCQNRDNFTALNKADDGSSVKISNAVSEEFTEVRTNLVSTLLKSVSANKAAP 472
Query: 471 KPIKIYEVGDVVL---LDEK---------KDVGASCRRRLAALYCGANSGFELIHCLVDR 518
P+K++E+ DV + L K DVGA +R L A+YC ++ E+IH L+DR
Sbjct: 473 LPLKMFEISDVSIKGSLGNKDLSDPNSNNSDVGAYNKRMLGAIYCNQSAKIEVIHGLLDR 532
Query: 519 IMEVIGTPF-VPVGDDTGYYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDI 577
IM V+ + GYY++ S++ FLPG ++ GK VG GIVHP VL N+
Sbjct: 533 IMLVLDIKLDATRSSNKGYYLELSNDKLFLPGTGINVIVNGKRVGHMGIVHPLVLKNYSC 592
Query: 578 SDPCSFMEIDI 588
S PC+ +E+++
Sbjct: 593 SFPCTILELEL 603
>sp|O13432|SYFB_CANAX Phenylalanine--tRNA ligase beta subunit OS=Candida albicans GN=FRS1
PE=2 SV=3
Length = 592
Score = 546 bits (1406), Expect = e-154, Method: Compositional matrix adjust.
Identities = 287/608 (47%), Positives = 396/608 (65%), Gaps = 32/608 (5%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MPT+ V ++ LF LG+SYT EEF++LCF FGIELD+ TTE D +G DE
Sbjct: 1 MPTIPVDKEDLFKLLGRSYTTEEFDELCFQFGIELDEDTTE----------DVKG--TDE 48
Query: 61 EVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSIR 120
KIEVPANRYD+LC+EGIAQAL F P Y LS + + + +K T IR
Sbjct: 49 RPQLKIEVPANRYDMLCIEGIAQALNEFLGNTSAPNYKLSPSKPE--ISLTIKESTYPIR 106
Query: 121 PYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPP 180
Y A+LR+++ DE +Y+SFI LQDKLH N+CR RTLVAIGTHDLDTL PFTYEAL P
Sbjct: 107 QYAASAILRNVNLDERAYDSFIALQDKLHANLCRNRTLVAIGTHDLDTLTPPFTYEALAP 166
Query: 181 SHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIIN 240
I F PL QT++ +ELMEFY+ D + K+LHII++SP+YPV+ D NRTV SLPPIIN
Sbjct: 167 KDIVFKPLNQTKEINGEELMEFYEKDKNIGKFLHIIKDSPVYPVMLDANRTVASLPPIIN 226
Query: 241 GAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYA-DGRSY 299
HS ITL TKNV+I+ T TD TK +IV+N +V +FS YCK +++EPV+++ + +
Sbjct: 227 SDHSKITLNTKNVWIDVTGTDRTKTEIVINQLVAMFSRYCKEPFEIEPVQIISEHNNETR 286
Query: 300 VYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPT 359
V P+++ + +SYIN +G++ EE++ LL +M L A S + ++V +P T
Sbjct: 287 VCPNITPRTAKAEISYINSCVGLNYSGEEISKLLKKMSLDATPSTEERDI--LDVKIPIT 344
Query: 360 RSDVLHPCDVMEDVAIAYGYNNIPKRKPAS----VKPLALNEFSDLMRLEIAMNGFTEVL 415
RSD+LH CD+MEDVAI YGY+N+ K KP + PL +N+ +D++RL + G+ EV+
Sbjct: 345 RSDILHQCDIMEDVAIGYGYDNLKKTKPQAESLVAAPLPVNKVADILRLASSQAGYLEVM 404
Query: 416 TWILCSSKEISTMLNRQTDESTAV-VGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIK 474
L S E L ++ D + AV + NP+T +++VVRTTL+PGILKT+ N+ H PIK
Sbjct: 405 PLTLSSHDENFAWLKQKDDGTKAVKLENPKTIEYQVVRTTLLPGILKTVKENRKHSLPIK 464
Query: 475 IYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFV--PVGD 532
++E GD+VL + + + GA +R AALY G SGFE++ L+ +IM+ + TP++ P D
Sbjct: 465 VFECGDIVLKNPELERGAFNQRNWAALYVGKTSGFEMVQGLLGKIMQTMRTPWLENPSKD 524
Query: 533 D-TGYYIQRSDE-PEFLPGRQASITHK------GKHVGTFGIVHPEVLNNFDISDPCSFM 584
GY+I+ E F PGR A I + K +G+ G++HPEV+NNFDI S +
Sbjct: 525 QRRGYWIEEDKENTTFFPGRGAKIYFRNADNAEAKAIGSIGVLHPEVMNNFDIPYAASSV 584
Query: 585 EIDIENFL 592
EI+ E FL
Sbjct: 585 EINAEVFL 592
>sp|O42849|SYFB_SCHPO Phenylalanine--tRNA ligase beta subunit OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=frs1 PE=3 SV=1
Length = 589
Score = 535 bits (1377), Expect = e-151, Method: Compositional matrix adjust.
Identities = 278/603 (46%), Positives = 386/603 (64%), Gaps = 33/603 (5%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MPT+S ++ L+ ALG+ YT +EF++LCF FGIELD+ TT D E ++
Sbjct: 1 MPTISCDKEELYKALGREYTTQEFDELCFQFGIELDEDTTN----------DPERSPSER 50
Query: 61 EVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSIR 120
+ KI++PANRYD+LCLEGIAQAL VFN++ P+Y L S + + PETS IR
Sbjct: 51 PSL-KIDIPANRYDMLCLEGIAQALNVFNRRMATPQYKL----LPSTTSLTISPETSEIR 105
Query: 121 PYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPP 180
PY A+LR + D Y SFI LQDKLH N+CR RTLVAIGTHD ++GPFTYEAL P
Sbjct: 106 PYAAAAILRGVKLDPIRYQSFIALQDKLHANLCRNRTLVAIGTHDFSVMEGPFTYEALKP 165
Query: 181 SHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIIN 240
INFVPL QT++ L+EFYK L +YLHII NSP YPV+ D R V SLPPIIN
Sbjct: 166 EEINFVPLNQTQEINGSNLLEFYKDSKHLSRYLHIIANSPRYPVILDAKRRVCSLPPIIN 225
Query: 241 GAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYA-DGRSY 299
S I++ T+++FI+ TATD TK +IV+N M T+FS YC+ + +EPV ++ +G +
Sbjct: 226 SEFSKISVDTRDIFIDVTATDKTKLEIVVNMMTTMFSCYCEEPFTIEPVNIISEHNGCTR 285
Query: 300 VYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPT 359
V P+L+ + + Y+N G+SL +E+ LL RM L A+ + N+ + V VPP
Sbjct: 286 VTPNLNPTCFKADIDYLNEACGLSLPEDEICHLLTRMMLTAK--PNPNDSKTLLVYVPPL 343
Query: 360 RSDVLHPCDVMEDVAIAYGYNNIPKRKPASV----KPLALNEFSDLMRLEIAMNGFTEVL 415
R+D+LH CD+MED+ IAYGY+N+ PA KP +N +D++R E+A G++EV+
Sbjct: 344 RADILHQCDIMEDLGIAYGYDNLKHTYPAHSVTFGKPFEVNRLADIIRNEVAYAGWSEVM 403
Query: 416 TWILCSSKEISTMLNRQTDESTAV-VGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIK 474
+ILCS E L R+TD+S AV + NP+T +F+VVR++L+PGILKT+ NK+H PIK
Sbjct: 404 PFILCSHDENYAWL-RKTDDSKAVQLANPKTLEFQVVRSSLLPGILKTVRENKNHALPIK 462
Query: 475 IYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFV---PVG 531
I+EV DV D ++ R L A++ G NSGFE IH L+DR+M ++ T +
Sbjct: 463 IFEVSDVAFCDYSRERMTRNERHLCAIFAGLNSGFEQIHGLLDRVMLMLNTKRIMNPKDS 522
Query: 532 DDTGYYIQRSDEPEFLPGRQASITHK------GKHVGTFGIVHPEVLNNFDISDPCSFME 585
D GY+I+ D+ F PGR A++ ++ G VG FG++HP VL F+++ S +E
Sbjct: 523 DAVGYWIEAEDDSTFFPGRCAAVYYRKDFGTAGIRVGVFGVLHPLVLEKFELTSAASAVE 582
Query: 586 IDI 588
ID+
Sbjct: 583 IDL 585
>sp|P15624|SYFB_YEAST Phenylalanine--tRNA ligase beta subunit OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=FRS1 PE=1 SV=3
Length = 595
Score = 526 bits (1354), Expect = e-148, Method: Compositional matrix adjust.
Identities = 273/614 (44%), Positives = 394/614 (64%), Gaps = 41/614 (6%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MPTVSV + +LF LGK+YT +EF++LCF FG+E+D+ TTE+A+ + E
Sbjct: 1 MPTVSVNKQQLFDLLGKNYTSQEFDELCFEFGMEMDEDTTEEAL------------KTGE 48
Query: 61 EVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSIR 120
E K+++ ANRYDLLC+EGI+Q+L + +++E P Y LS + ++ + T IR
Sbjct: 49 EPELKLDISANRYDLLCIEGISQSLNEYLERKERPDYKLSKPTT----KLIIDKSTEQIR 104
Query: 121 PYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPP 180
P+ AVLR+I +E SY SFI LQDKLH N+CR R+LVA+GTHDLD+++GPF Y ALPP
Sbjct: 105 PFATAAVLRNIKLNEKSYASFIALQDKLHANLCRNRSLVAMGTHDLDSIEGPFHYRALPP 164
Query: 181 SHINFVPLKQTRDFTADELMEFYKSDLK---LKKYLHIIENSPLYPVLYDQNRTVLSLPP 237
I FVPL QT++FT D+L+EFYKS + + +Y+HIIE+SP++PV+ D V SLPP
Sbjct: 165 KDIKFVPLNQTQEFTGDKLIEFYKSPEQKNNIGRYVHIIEDSPVFPVIMDSKDRVCSLPP 224
Query: 238 IINGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYA-DG 296
+IN HS I++ T+N+ I+ TATD TKA+IVLN + T+FS YC + VEPVE+V +G
Sbjct: 225 LINSEHSKISVNTRNILIDITATDKTKAEIVLNILTTMFSRYCDEPFTVEPVEIVSEHNG 284
Query: 297 RSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLV 356
+S + P+ + M+VS+ YIN +G+ A+E+ L +M LHA +S + +++ +
Sbjct: 285 QSRLAPNFNDRIMDVSIKYINSCLGLDQSADEIAHCLKKMSLHAVQSKEDKDILHVD--I 342
Query: 357 PPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPAS-----VKPLALNEFSDLMRLEIAMNGF 411
P TR D+LH CD+MED A+ YG+NN+PK + S KPL +N+ SD+ R+ + +
Sbjct: 343 PVTRPDILHACDIMEDAAVGYGFNNLPKGEKLSNANFIAKPLPINKVSDIFRVASSQATW 402
Query: 412 TEVLTWILCSSKEISTMLNRQTDESTAVV--GNPRTSDFEVVRTTLMPGILKTIGHNKDH 469
EVL LCS E L RQ+D V NP+T +++VVRTTL+PGILKT+ N+ H
Sbjct: 403 VEVLPLTLCSHDENFKFL-RQSDNGDLAVKLANPKTLEYQVVRTTLLPGILKTVKENRKH 461
Query: 470 PKPIKIYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFV- 528
PIK++E GDVV D+K + A R AA+Y G NSGFE+I L+ +IM+ T ++
Sbjct: 462 SLPIKVFETGDVVFKDDKLERKAYNERHWAAIYVGKNSGFEIIQGLLGKIMQTFRTEWIA 521
Query: 529 ---PVGDDTGYYIQRSDEPE-FLPGRQASITHKG------KHVGTFGIVHPEVLNNFDIS 578
GY+I+ D + + PGR A + + K +G G++HPEV+ NFD+
Sbjct: 522 DYGAAASGRGYWIEEDDSVKTYFPGRGAKVMFRSKEGAEPKQIGHLGVLHPEVMMNFDVP 581
Query: 579 DPCSFMEIDIENFL 592
SF+E++ E FL
Sbjct: 582 FAASFVEVNAEVFL 595
>sp|Q8SS40|SYFB_ENCCU Probable phenylalanine--tRNA ligase beta subunit OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU04_0900 PE=3 SV=1
Length = 557
Score = 349 bits (895), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 208/596 (34%), Positives = 317/596 (53%), Gaps = 50/596 (8%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MPT+ + R+ LG FE + F FG+ELDDV ++EEG
Sbjct: 1 MPTLVAEKKRIQDLLGMDLGDRRFEKILFDFGLELDDV------------VEEEG----- 43
Query: 61 EVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSIR 120
+ +Y+IE+PANRYDLLC EG+ ALR F + Y DV + ++ E R
Sbjct: 44 KTMYRIEIPANRYDLLCAEGLCYALRAFLSME---TYEDIDVEEGEVVVYKTGGEE---R 97
Query: 121 PYVVCAVLRDISF-DEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALP 179
P + CAV++ + E +Y SFID QDKLH I R R LV++GTHDLD ++GP Y++
Sbjct: 98 PCIACAVIKGVDLLSEGAYKSFIDYQDKLHLTIGRNRALVSMGTHDLDKIKGPVFYKSET 157
Query: 180 PSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPII 239
P I F PL R+ EL + K+ +Y+ +IE + YP+ D T++SLPPII
Sbjct: 158 PERIGFKPLNAEREVNGKELGSRFPPGSKIGRYMRLIEKNEKYPLFEDSMGTIMSLPPII 217
Query: 240 NGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSY 299
N + I+ TKNVF+E T TD + L ++ C R ++E VE+ + R+
Sbjct: 218 NSDATKISPGTKNVFVEMTGTDFHRVNTALKLLLG-----CFRGRKIESVEIRNGNERTR 272
Query: 300 VYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPT 359
P + + + L IN ++G+ L S + RM +H S ++ + V V
Sbjct: 273 T-PVMHNRSYVMGLGEINRSLGLDLSLSAAKSYMERM-MH---SVDTIDESTLRVRVHDI 327
Query: 360 RSDVLHPCDVMEDVAIAYGYNNIPKRKPA---SVKPLALNEFSDLMRLEIAMNGFTEVLT 416
RSDVLH CD++ED+AIA+G+NN + P+ + + LN+FSD +R E+++ GF E LT
Sbjct: 328 RSDVLHKCDLIEDIAIAHGFNNFRRELPSFFTAGSEIPLNKFSDKLRTELSIMGFDEALT 387
Query: 417 WILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIKIY 476
L S +E N + V+ NP+++ +EV RT+L+PG++KT+ N P +++
Sbjct: 388 LTLLSREE-----NVIDGDQAVVLMNPKSASYEVCRTSLIPGLMKTVASNLHMKIPFRLF 442
Query: 477 EVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDDTGY 536
EV DVVLLD++ + GAS RRLAA+YCG E + + +++ G
Sbjct: 443 EVSDVVLLDKENECGASNSRRLAAMYCGHTPCLEEVQGSLSLLLKKCGVRH--------S 494
Query: 537 YIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDIENFL 592
Y +D +L + A + + +G+ G+ +PE+ F + SF EID+E L
Sbjct: 495 YSTHNDSARYLKNQSALVIVEDAAIGSIGVCNPEICKTFRVPYAASFFEIDVEKLL 550
>sp|C4VA52|SYFB_NOSCE Probable phenylalanine--tRNA ligase beta subunit OS=Nosema ceranae
(strain BRL01) GN=NCER_101490 PE=3 SV=1
Length = 504
Score = 292 bits (747), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 189/562 (33%), Positives = 294/562 (52%), Gaps = 68/562 (12%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MPT+SV + + LGKSY E F D+ F +G+E+D+ EE D+
Sbjct: 1 MPTISVKKREIEKLLGKSYDSETFSDILFNYGLEIDECI-------------EESDD--- 44
Query: 61 EVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMH---VKPETS 117
+ YKIE+PANRYDLLC EG+ AL+ Y V +D LQ + +
Sbjct: 45 -ITYKIEIPANRYDLLCAEGLNYALQ---------SYLFGKVFEDINLQSSEYTIFKQHF 94
Query: 118 SIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEA 177
R V A++++ FD+ SY+SFI Q+KL N+ R R+LV++GTHDLDT+ P TY++
Sbjct: 95 GNRSCVAAAIIKNYKFDKYSYDSFISYQEKLCGNLGRNRSLVSMGTHDLDTISWPVTYKS 154
Query: 178 LPPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPP 237
+ + + F PL T++ ++L +K D + KYL ++N Y V D +LS+PP
Sbjct: 155 IKKTELKFAPLNCTKEI--NDLEMHFKDDKNIGKYLQYVDNDN-YIVFMDAKGHILSVPP 211
Query: 238 IINGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIF--SEYCKRKYQVEPVEVVYAD 295
+IN + I++ T N+ +E T T+ K L +++ F C+ + E++
Sbjct: 212 VINSNRTKISVNTTNILVEVTGTNTYKVNTCLKMILSAFRTDNMCQVNIISDKQEILEIK 271
Query: 296 GRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVL 355
+SY+ +S+ + + +++ +++ LL +M + ++NV
Sbjct: 272 DKSYL----------LSIDEVYKELNINISVIDLSDLLIKMMYKTNII----DDKHLNVT 317
Query: 356 VPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPASVKPLA----LNEFSDLMRLEIAMNGF 411
VP R DVLH D++ED+AI YG+NNI P + + LN+FSD +RLE+ M GF
Sbjct: 318 VPSVRQDVLHKADLIEDIAICYGFNNINMVMP-DINTIGSENRLNKFSDKLRLEMCMLGF 376
Query: 412 TEVLTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHPK 471
TEV T +L S + +++AVV N ++ + E VR++L PG++K + N
Sbjct: 377 TEVYTMVLVSKSD------NIFGDNSAVVSNYKSLECEAVRSSLYPGLMKAVSSNLHCKI 430
Query: 472 PIKIYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVG 531
PIKI+EVGDVV LD + DVGA RR L+ LY G S E + + I+E G
Sbjct: 431 PIKIFEVGDVVFLDSESDVGARNRRYLSCLYVGNKSHLEDVQGPMTVILEKCGIK----- 485
Query: 532 DDTGYYIQR-SDEPEFLPGRQA 552
Y +R DE ++L + A
Sbjct: 486 ---DYKFERMDDEKKYLKNQSA 504
>sp|C6A237|SYFB_THESM Phenylalanine--tRNA ligase beta subunit OS=Thermococcus sibiricus
(strain MM 739 / DSM 12597) GN=pheT PE=3 SV=1
Length = 560
Score = 287 bits (734), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 185/597 (30%), Positives = 297/597 (49%), Gaps = 49/597 (8%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MP V + L +GK +T +E+EDL ELDD+ E++
Sbjct: 1 MPKFDVAKHDLERLVGKEFTVDEWEDLFLYAKCELDDIW-----------------EHEG 43
Query: 61 EVIYKIEVP-ANRYDLLCLEGIAQALR-VFNKQQEIPKYTLSDVSKDSMLQMHVKPETSS 118
++ +K + NR DL EGIA+ +R + +P+Y++ ++S + ++V
Sbjct: 44 KIYFKADAKDTNRPDLWSAEGIARQVRWALGMLRGLPRYSI----EESNVMVYVDENLKD 99
Query: 119 IRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEAL 178
IRPY V A++ D+ DE + I LQ+K+ + R+R VAIGT D D L PF Y+A+
Sbjct: 100 IRPYGVYAIVEDLELDEEALKQIIQLQEKVALTLGRKRKEVAIGTFDFDKLSPPFYYKAV 159
Query: 179 PPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPI 238
P I F+PL R+ +ADE++E ++ K K+Y H+I+ P YP+L D VLS+PP+
Sbjct: 160 EPQKIKFIPLNCEREMSADEILEEHE---KGKEYGHLIKGRPYYPLLVDSEGNVLSMPPV 216
Query: 239 ING-AHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGR 297
IN H +T +TK++FI+ T +L + LN +VT +E R ++ V V+Y D
Sbjct: 217 INSETHGKVTEETKSIFIDITGWNLETIMLALNVIVTALAE---RGGKIRTVRVIYKDFE 273
Query: 298 SYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVP 357
PDL+ EV L+YI GV L +++ LL RM + + + P
Sbjct: 274 LKT-PDLTPKEFEVDLNYIKRLAGVELTDKDIKDLLERMMYEVDFVDR-----RVKLRYP 327
Query: 358 PTRSDVLHPCDVMEDVAIAYGYNNIPKRKPASVKPLALNEFSDL---MRLEIAMNGFTEV 414
R+D++HP DV+EDV IAYGYNNI +P ++F D +R + G EV
Sbjct: 328 AFRNDIMHPRDVLEDVLIAYGYNNIEPEEPELAVQGKGDDFVDFENAIRDLMVGFGLQEV 387
Query: 415 LTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIK 474
+T+ L + + +N +E + NP + + +R L+P +++ + N P +
Sbjct: 388 MTFNLTNREAQFDKMN-IPEEDIVEIENPISQKWSALRRWLLPSLMEFLSQNTHEEYPQR 446
Query: 475 IYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDDT 534
I+EVG L+DE ++ +L F ++D ++ +G
Sbjct: 447 IFEVGKATLIDESRETKTISESKLVVAIAHPKVTFTEAKEILDSVLRHLGAE-------- 498
Query: 535 GYYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDIENF 591
Y I+ + F+PGR I +GK VG G +HP+VL N+ + P + EI + F
Sbjct: 499 -YTIREIEYGSFIPGRAGEIIVEGKKVGIIGEIHPQVLENWGVEMPVAAFEIFLRPF 554
>sp|Q8U260|SYFB_PYRFU Phenylalanine--tRNA ligase beta subunit OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pheT
PE=3 SV=1
Length = 556
Score = 284 bits (726), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 190/592 (32%), Positives = 296/592 (50%), Gaps = 49/592 (8%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MP V + L +G+ ++ EE+EDL ELDDV E D
Sbjct: 1 MPKFDVAKSDLERLVGREFSVEEWEDLVLYAKCELDDVW-----------------EEDG 43
Query: 61 EVIYKIEVP-ANRYDLLCLEGIAQALR-VFNKQQEIPKYTLSDVSKDSMLQMHVKPETSS 118
++ +K++ NR DL EG+A+ +R + +PKY + ++S + ++V + +
Sbjct: 44 KIYFKLDSKDTNRPDLWSAEGVARQIRWALGLAKGLPKYEV----EESDVVVYVDKKLRN 99
Query: 119 IRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEAL 178
IRPY V AV+ + DE + + I LQ+K+ RRR VAIG D D ++ P Y A
Sbjct: 100 IRPYGVYAVVEGLKLDEEALSQLIQLQEKVALTYGRRRREVAIGIFDFDKVKPPIYYRAA 159
Query: 179 PPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPI 238
+ FVPL + + T +E++E ++ K ++Y H+I + P YP+L D VLS+PPI
Sbjct: 160 EKTE-KFVPLGYSEEMTLEEILEKHE---KGREYGHLIRDKPYYPLLVDSEGNVLSMPPI 215
Query: 239 INGAHSA-ITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGR 297
IN + +T +TKNVF++ T DL K + LN +VT +E R +++ V+V+Y D
Sbjct: 216 INSELTGRVTTETKNVFVDVTGWDLRKVMLALNVIVTALAE---RGGKIKRVKVIYPD-F 271
Query: 298 SYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVP 357
PDL+ EVS YI G+ L EE+ LL RM E + + V P
Sbjct: 272 EITTPDLTPKEFEVSFEYIRKLSGLELSNEEIKELLERMMYEVEILSENKAK----VKYP 327
Query: 358 PTRSDVLHPCDVMEDVAIAYGYNNIPKRKP---ASVKPLALNEFSDLMRLEIAMNGFTEV 414
R D++H DV+EDV IAYGYNNI +P + +F D +R + G EV
Sbjct: 328 AFRDDIMHTRDVLEDVLIAYGYNNIDPEEPKLAVQGRGDPFKDFEDAIRDLMVGFGLQEV 387
Query: 415 LTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIK 474
+T+ L +SKE+ +E + NP +S + +R L+P +++ + +N P +
Sbjct: 388 MTFNL-TSKEVQFDKMNIPEEEIVEIANPISSRWSALRKWLLPSLMEFLSNNTHEEYPQR 446
Query: 475 IYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDDT 534
I+EVG L+DE ++ +LA G+ F ++D +M +G
Sbjct: 447 IFEVGLATLIDESRETKTVSEPKLAVALAGSGYTFTNAKEILDSLMRHLGIE-------- 498
Query: 535 GYYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEI 586
Y I+ + F+PGR I GK +G G +HP+VL N++I P EI
Sbjct: 499 -YDIEETVHGSFIPGRVGKILVDGKEIGIIGEIHPQVLENWNIQVPVVAFEI 549
>sp|B1L7C0|SYFB_KORCO Phenylalanine--tRNA ligase beta subunit OS=Korarchaeum cryptofilum
(strain OPF8) GN=pheT PE=3 SV=1
Length = 556
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 191/599 (31%), Positives = 307/599 (51%), Gaps = 61/599 (10%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MP VS R R L +S ++EE DL D T + +L+ G+E
Sbjct: 1 MPVVSFSR-REMERLWRSLSEEELTDLL--------DFT--------KMNLESFGEE--- 40
Query: 61 EVIYKIEVPANRYDLLCLEGIAQALR-VFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSI 119
EV ++R DL+ LEGI + L+ + N++ +PKY + + ++ V + +
Sbjct: 41 ---VGFEVTSDRMDLVTLEGIVRCLKGISNEELGLPKYRV----RRKAFEVRVGEGVAKV 93
Query: 120 RPYVVCAVLRDISF-DEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEAL 178
RPYVV A++RD+ E S + I+ Q+K+H + R+R VAIG HD ++ P Y+A
Sbjct: 94 RPYVVAALVRDVDLRTEESLVALIEAQEKIHDTLGRKRRRVAIGLHDFSKVKPPIIYDAR 153
Query: 179 PPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSP-LYPVLYDQNRTVLSLPP 237
++FVPL + + +A E++E + K K Y H+I N L P++ D VLS+PP
Sbjct: 154 RAEEVHFVPLGEYAEMSAKEILEQTE---KGKIYSHLIANPENLVPLIMDSREEVLSMPP 210
Query: 238 IINGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGR 297
IIN + +T +++FI+ T TDL K + + I S +R ++ ++++Y DGR
Sbjct: 211 IINSELTRLTPGVRDIFIDVTGTDL---KAIWYALEIISSALAERGGEISTLDILYPDGR 267
Query: 298 SYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVP 357
+ P MEV L +I +G++L ++V L R +L AE S + VL+P
Sbjct: 268 NIETPRHEPEEMEVDLDFIRSILGLNLSEDDVVMQLLRARLDAECS-----DGKVRVLIP 322
Query: 358 PTRSDVLHPCDVMEDVAIAYGYNNIPKRKPASV----KPLALNEFSDLMRLEIAMNGFTE 413
RSD LHP DV E+V+I G N I P +V +P + + S +R + G+ E
Sbjct: 323 GYRSDFLHPIDVAEEVSITLGLNKIGYELPKNVMTVGRPHPVEKVSRKVRTVMIGLGYQE 382
Query: 414 VLTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPI 473
VL +I+ S + + R+ E + NP + + V+R L PG+L + +N P
Sbjct: 383 VLNYIMTSRASLFHAVGREEREVVEI-SNPVSESYSVLRDALFPGLLAFLANNTHVRYPQ 441
Query: 474 KIYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDD 533
K++E+GDVVL+DE+ + RR+AA Y + GFE I+ + + E +
Sbjct: 442 KVFEIGDVVLIDERLENKTRDERRVAAAYADDSVGFEDIYSHLKVLFE-----------N 490
Query: 534 TGYYIQ---RSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDIE 589
Y I+ R + P F+ GR AS+ +G+ VG G + PEVL N I+ P + E+ ++
Sbjct: 491 LSYRIELEPRKERP-FIEGRCASVLREGEEVGVIGEIDPEVLLNLGITVPVAIFEVALK 548
>sp|O73984|SYFB_PYRHO Phenylalanine--tRNA ligase beta subunit OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=pheT PE=1 SV=1
Length = 556
Score = 274 bits (700), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 185/592 (31%), Positives = 286/592 (48%), Gaps = 50/592 (8%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MP V + L +G+S++ EE+EDL ELDDV E
Sbjct: 1 MPKFDVSKSDLERLIGRSFSIEEWEDLVLYAKCELDDVWEENG----------------- 43
Query: 61 EVIYKIEVP-ANRYDLLCLEGIAQALR-VFNKQQEIPKYTLSDVSKDSMLQMHVKPETSS 118
+V +K++ NR DL EG+A+ ++ ++ +PKY + K S + ++V +
Sbjct: 44 KVYFKLDSKDTNRPDLWSAEGVARQIKWALGIEKGLPKYEV----KKSNVTVYVDEKLKD 99
Query: 119 IRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEAL 178
IRPY V A++ + DE S + I LQ+K+ RRR VAIG D D ++ P Y+A
Sbjct: 100 IRPYGVYAIVEGLRLDEDSLSQMIQLQEKIALTFGRRRREVAIGIFDFDKIKPPIYYKAA 159
Query: 179 PPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPI 238
+ F PL + T +E++E ++ K ++Y H+I++ YP+L D VLS+PPI
Sbjct: 160 EKTE-KFAPLGYKEEMTLEEILEKHE---KGREYGHLIKDKQFYPLLIDSEGNVLSMPPI 215
Query: 239 INGAHSA-ITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGR 297
IN + +T TKNVFI+ T L K + LN MVT +E R ++ V VVY D
Sbjct: 216 INSEFTGRVTTDTKNVFIDVTGWKLEKVMLALNVMVTALAE---RGGKIRSVRVVYKDFE 272
Query: 298 SYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVP 357
PDL+ EV L YI G+ L E+ LL +M E S + P
Sbjct: 273 IET-PDLTPKEFEVELDYIRKLSGLELNDGEIKELLEKMMYEVEISRG-----RAKLKYP 326
Query: 358 PTRSDVLHPCDVMEDVAIAYGYNNIPKRKP---ASVKPLALNEFSDLMRLEIAMNGFTEV 414
R D++H D++EDV IAYGYNNI +P + +F D +R + G EV
Sbjct: 327 AFRDDIMHARDILEDVLIAYGYNNIEPEEPKLAVQGRGDPFKDFEDAIRDLMVGFGLQEV 386
Query: 415 LTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIK 474
+T+ L ++KE+ +E + NP + + +R ++P +++ + +N P +
Sbjct: 387 MTFNL-TNKEVQFKKMNIPEEEIVEIANPISQRWSALRKWILPSLMEFLSNNTHEEYPQR 445
Query: 475 IYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDDT 534
I+EVG L+DE ++ +LA G F ++D +M +G
Sbjct: 446 IFEVGLATLIDESRETKTVSEPKLAVALAGTGYTFTNAKEILDALMRHLGFE-------- 497
Query: 535 GYYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEI 586
Y I+ + F+PGR I G+ +G G VHP+VL N++I P EI
Sbjct: 498 -YEIEEVEHGSFIPGRAGKIIVNGRDIGIIGEVHPQVLENWNIEVPVVAFEI 548
>sp|Q9UYX2|SYFB_PYRAB Phenylalanine--tRNA ligase beta subunit OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=pheT PE=3 SV=1
Length = 556
Score = 270 bits (690), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 187/592 (31%), Positives = 295/592 (49%), Gaps = 50/592 (8%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MP V + L +G+S++ EE+EDL ELDDV E
Sbjct: 1 MPKFDVSKSDLERLVGRSFSLEEWEDLVLYAKCELDDVWEENG----------------- 43
Query: 61 EVIYKIEVP-ANRYDLLCLEGIAQALR-VFNKQQEIPKYTLSDVSKDSMLQMHVKPETSS 118
+V +K++ NR DL EG+A+ +R Q +P+Y + K+S + ++V + +
Sbjct: 44 KVYFKLDSKDTNRPDLWSAEGVARQIRWALGLQSGLPEYEV----KESDVVVYVDEKLKN 99
Query: 119 IRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEAL 178
+RPY V A++ ++ DE S + I LQ+K+ RRR VAIG D + ++ P Y A
Sbjct: 100 VRPYGVYAIVEGLNLDEDSLSQMIQLQEKVALTFGRRRREVAIGIFDFEKVKPPIYYRAA 159
Query: 179 PPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPI 238
+ FVPL + T +E++E ++ + +Y H+I++ P YP+L D VLS+PPI
Sbjct: 160 EKTE-KFVPLGFEEELTLEEILEKHEKGI---EYGHLIKDKPHYPLLVDSEGNVLSMPPI 215
Query: 239 INGAHSA-ITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGR 297
IN + +T +TK VFI+ T DL K + LN MVT +E R ++ V+V+Y D
Sbjct: 216 INSELTGRVTTETKKVFIDVTGWDLKKVMLALNVMVTALAE---RGGKIRSVKVIYKD-F 271
Query: 298 SYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVP 357
V PDL+ EV L+YI G+ L+ EE+ LL RM E +L P
Sbjct: 272 EIVTPDLTPKRFEVELNYIRKLSGLDLKDEEIKELLERMMYSVELEDG-----KAKLLYP 326
Query: 358 PTRSDVLHPCDVMEDVAIAYGYNNIPKRKP---ASVKPLALNEFSDLMRLEIAMNGFTEV 414
R D++H DV+EDV IAYGYNNI +P + +F D +R + G E+
Sbjct: 327 AFRDDIMHARDVLEDVLIAYGYNNIEPEEPKLAVQGRGDPFKDFEDAIRDLMVGFGLQEI 386
Query: 415 LTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIK 474
+T+ L ++KE+ +E + NP + + +R L+P +++ + +N P +
Sbjct: 387 MTFNL-TNKEVQFKKMNIPEEEIVEIANPVSQRWSALRKWLLPSLMEFLSNNTHEEYPQR 445
Query: 475 IYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDDT 534
I+EVG L+DE ++ +LA G+ F ++D +M +G
Sbjct: 446 IFEVGLATLIDESRETKTISEPKLAVALAGSEYTFTNAKEILDSLMRHLGVE-------- 497
Query: 535 GYYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEI 586
Y I+ ++ F+ GR + GK VG G +HP+VL N++I P EI
Sbjct: 498 -YEIEETEHGSFISGRVGKVLVNGKEVGIIGEIHPQVLENWNIEVPVVAFEI 548
>sp|B6YTJ3|SYFB_THEON Phenylalanine--tRNA ligase beta subunit OS=Thermococcus onnurineus
(strain NA1) GN=pheT PE=3 SV=1
Length = 572
Score = 265 bits (676), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 186/603 (30%), Positives = 285/603 (47%), Gaps = 59/603 (9%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MP V + L +GKS+T EE+EDL ELDDV E I + D D
Sbjct: 1 MPKFDVSKADLERLVGKSFTVEEWEDLFLYAKCELDDVWEENGQIYFK------ADSKD- 53
Query: 61 EVIYKIEVPANRYDLLCLEGIAQALR-VFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSI 119
NR DL EGIA+ +R + +P+Y +V K ++ ++V + I
Sbjct: 54 ---------TNRPDLWSAEGIARQIRWALGMAKGLPRY---EVEKSDVV-VYVDEKLKDI 100
Query: 120 RPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALP 179
RPY V A++ +S D+ + I+LQ+K+ RRR VAIG D D ++ P Y A
Sbjct: 101 RPYGVYAIVEGLSLDDEALKQMINLQEKVALTFGRRRREVAIGIFDFDKVKPPIYYRAAE 160
Query: 180 PSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPII 239
+ FVPL + +E++E ++ K K+Y H+I++ P YP+L D VLS+PPII
Sbjct: 161 KTE-KFVPLGFEEKMSLEEILEKHE---KGKEYGHLIKDKPYYPLLVDSEGNVLSMPPII 216
Query: 240 NGAHSA-ITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRS 298
N + +T +T+NVF++ T DL K + LN +VT +E R +++ V+VVY D
Sbjct: 217 NSELTGRVTTETRNVFVDVTGWDLNKIMLALNVVVTALAE---RGGKIKSVKVVYGDFEI 273
Query: 299 YVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPP 358
P+L+ EV YI G+ L EE+ LL RM E + P
Sbjct: 274 ET-PNLTPKEFEVEFEYIRRLAGIDLSDEEIKELLERMFYEVELENG-----KAKLKYPA 327
Query: 359 TRSDVLHPCDVMEDVAIAYGYNNIPKRKP---ASVKPLALNEFSDLMRLEIAMNGFTEVL 415
R D++H DV+EDV IAYGYN I +P + EF D +R + G EV+
Sbjct: 328 FRDDIMHARDVLEDVLIAYGYNEIKPEEPKLAVQGRGDKFVEFEDTVRELMVGYGLQEVM 387
Query: 416 TWILCSSKEISTMLNRQTDE------------STAVVGNPRTSDFEVVRTTLMPGILKTI 463
T+ L + + T +N E + NP + + +R L+P +++ +
Sbjct: 388 TFNLTNREAQYTKMNLDFGEHPFEEYGHHPPARLVEIENPISPKWSALRAWLIPSLMEFL 447
Query: 464 GHNKDHPKPIKIYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVI 523
N P +I+EVG L++E K+ +LA F + ++D +M +
Sbjct: 448 SQNTHEEYPQRIFEVGKTTLINENKETKTVSESKLAVAIAHPRVTFTEVKEILDSVMHHL 507
Query: 524 GTPFVPVGDDTGYYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSF 583
G Y ++ + F+PGR I G+ VG G +HP+VL N+ I P +
Sbjct: 508 GLE---------YELKEIEHNSFIPGRVGKIIVNGQEVGIIGEIHPKVLENWGIEMPVAA 558
Query: 584 MEI 586
E+
Sbjct: 559 FEV 561
>sp|Q12YP2|SYFB_METBU Phenylalanine--tRNA ligase beta subunit OS=Methanococcoides
burtonii (strain DSM 6242) GN=pheT PE=3 SV=1
Length = 540
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 166/529 (31%), Positives = 276/529 (52%), Gaps = 39/529 (7%)
Query: 66 IEVPANRYDLLCLEGIAQALRVF-NKQQEIPKYTLSDVSKDSMLQMHVKPETSSIRPYVV 124
IE +R DL +EG+A+A+R F N + + +Y ++ S + + + + +RP +
Sbjct: 43 IEFFPDRPDLYSVEGVARAMRGFMNIETGLCQYEVTP----SGVHIELDEKIKEVRPVLG 98
Query: 125 CAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPPSHIN 184
CA+++ I+F +S S +DLQ+ LH + R R V+IG HD+ ++ PF Y+A+ P
Sbjct: 99 CAIVKGINFTSSSIKSLMDLQEDLHWGLGRNRKKVSIGVHDMTNIEPPFKYQAVSPD-FE 157
Query: 185 FVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIINGAHS 244
FVPL T T DE++E + + ++ +I+E YP++ D VLS PPIING +
Sbjct: 158 FVPLDFTEPMTMDEVLEKHPKGV---RFANILEGMEKYPLITDSEGKVLSFPPIINGTLT 214
Query: 245 AITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSYVYPDL 304
+ T ++FI+ T V + + S +R ++E V+VVY DG V PD+
Sbjct: 215 RVEESTTDLFIDVTGL----GDAVYTALSIVVSALAERGGKIESVKVVYPDGTEKVTPDM 270
Query: 305 SAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVL 364
+ + V S I+ IG+ L +E+ + L RM+ A G+ + VP R+D+L
Sbjct: 271 TPRTLNVPRSDIDSLIGIKLTDDEIINELKRMRFDASVLEDGD---MFEISVPTYRADIL 327
Query: 365 HPCDVMEDVAIAYGYNNIPKRKPASVK-----PLALNEFSDLMRLEIAMNGFTEVLTWIL 419
H D++ED+AI YG++ I P S P+++ +MR + G++EV+ + L
Sbjct: 328 HNFDIVEDIAIGYGFDKIKSEFPKSATIGCAHPISVTR--GVMREIMVSLGYSEVMPFTL 385
Query: 420 CSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIKIYEVG 479
S K +NR+ + V +P + D +VRTT++P +++ N+ H P +++EVG
Sbjct: 386 TSQKVHFEWMNREETDDVTFVLHPISEDQTMVRTTILPNLIEIFSLNQHHELPQRLFEVG 445
Query: 480 DVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDDTGYYIQ 539
+VV V + R LAA A + F I ++D +M D Y +
Sbjct: 446 EVV-------VNSKNRLHLAAASIHAQANFTEIREVLDAVMR---------ERDIEYEVV 489
Query: 540 RSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDI 588
S++P F+ GR+A I G+ VG G ++PEV+ NF + P EID+
Sbjct: 490 VSEDPAFIEGRRADILVNGEKVGMMGELYPEVIINFGLGQPIVGFEIDL 538
>sp|Q76KA7|SYFB_PYRKO Phenylalanine--tRNA ligase beta subunit OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=pheT PE=1
SV=1
Length = 574
Score = 263 bits (673), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 184/606 (30%), Positives = 285/606 (47%), Gaps = 63/606 (10%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MP V + L +GK+++ EE+EDL ELDDV E
Sbjct: 1 MPKFDVSKRDLERLVGKTFSVEEWEDLFLYAKCELDDVWEENG----------------- 43
Query: 61 EVIYKIEVP-ANRYDLLCLEGIAQALR-VFNKQQEIPKYTLSDVSKDSMLQMHVKPETSS 118
E+ +K + NR DL EGIA+ +R Q+ +PKY + + S + ++V +
Sbjct: 44 EIYFKADSKDTNRPDLWSAEGIARQIRFALGFQKGLPKYEI----EKSDVVVYVDEKLKD 99
Query: 119 IRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEAL 178
IRPY V A++ ++ DE + I+LQ+K+ RRR VAIG D D ++ P Y A
Sbjct: 100 IRPYGVYAIVEGLNIDEEALRQMINLQEKVALTFGRRRREVAIGIFDFDKVKPPIYYRAA 159
Query: 179 PPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPI 238
+ FVPL + T +E++E ++ K ++Y H+I++ P YP+L D VLS+PP+
Sbjct: 160 EKTE-KFVPLGYDEEMTLEEILEKHE---KGREYGHLIKDKPYYPLLVDSEGKVLSMPPV 215
Query: 239 INGAHSA-ITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGR 297
IN + +T +TKNVF++ T DL K + LN +VT +E R +++ V+VVY D
Sbjct: 216 INSETTGRVTTETKNVFVDITGWDLNKVMLALNVVVTALAE---RGGKIKSVKVVYPDFE 272
Query: 298 SYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVP 357
PDL+ EV L YI G+ L E+ LL RM E + P
Sbjct: 273 IET-PDLTPKEFEVELDYIRKLAGLELSDGEIKELLERMMYEVELENR-----RAKLRYP 326
Query: 358 PTRSDVLHPCDVMEDVAIAYGYNNIPKRKP---ASVKPLALNEFSDLMRLEIAMNGFTEV 414
R D++H DV+EDV IAYGYN I +P + EF D +R + G EV
Sbjct: 327 AFRDDIMHARDVLEDVLIAYGYNEIEPEEPKLAVQGRGDKFIEFEDAVRELMVGFGLQEV 386
Query: 415 LTWILCSSKEISTMLNRQTDE--------------STAVVGNPRTSDFEVVRTTLMPGIL 460
+T+ L + + +N E + NP + + +R L+P +L
Sbjct: 387 MTFNLTNREAQYDRMNLPCGEHQEECRDYFNHPPAELVEIENPISPKWSALRNWLIPSLL 446
Query: 461 KTIGHNKDHPKPIKIYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIM 520
+ N P K++EVG L+DE ++ +LA F +++ +M
Sbjct: 447 DFLSQNTHEEYPQKLFEVGKATLIDESRETKTVSESKLAVALAHPRVTFTEAKEILEGVM 506
Query: 521 EVIGTPFVPVGDDTGYYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDP 580
+G Y ++ ++ P F+PGR I G+ +G G +HP VL N+ I P
Sbjct: 507 RHLGFE---------YELEEAEHPSFIPGRVGKIIVNGETIGVIGEIHPAVLENWGIEMP 557
Query: 581 CSFMEI 586
+ E+
Sbjct: 558 VAAFEL 563
>sp|Q468N7|SYFB_METBF Phenylalanine--tRNA ligase beta subunit OS=Methanosarcina barkeri
(strain Fusaro / DSM 804) GN=pheT PE=3 SV=1
Length = 544
Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 180/560 (32%), Positives = 291/560 (51%), Gaps = 41/560 (7%)
Query: 39 TTEKAIIRKEKHLDEEGDENDEEVIYKIEVPANRYDLLCLEGIAQALRVF-NKQQEIPKY 97
T ++ II++ + + + +EE I IE +R DL +EG A+A+R F + + + KY
Sbjct: 17 TDKETIIKRAPMIGADIERVEEESI-DIEFFPDRPDLYSVEGAARAMRGFLDLETGLSKY 75
Query: 98 TLSDVSKDSMLQMHVKPETSSIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRT 157
+ K + + V + IRP++ CAV+R I F +S S +DLQ+ LH + R R
Sbjct: 76 EI----KPPKVSISVSEKILRIRPFLGCAVVRGIKFTSSSIKSLMDLQEDLHWGLGRNRK 131
Query: 158 LVAIGTHDLDTLQGPFTYEALPPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIE 217
V+IG HDL ++ PF Y A+ P FVPL T + E++E + K ++ H++
Sbjct: 132 KVSIGVHDLSNVKPPFRYMAVDPG-FKFVPLDYTEKMSMTEILEKHP---KGTRFAHLVR 187
Query: 218 NSPLYPVLYDQNRTVLSLPPIINGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFS 277
YP++ D + VLS PPIING +++T T ++FI+ T LN +VT +
Sbjct: 188 GFKKYPIILDSDDNVLSFPPIINGTLTSVTESTTDLFIDVTGLG-EAVYTALNIVVTALA 246
Query: 278 EYCKRKYQVEPVEVVYADGRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQ 337
E R Q+E V+VV D + PDL ++ + + +G+ L EE+ L RM+
Sbjct: 247 E---RGGQIEFVKVVRPDSGELILPDLEPKTRFLTKTEVRDLLGMELSIEEIVKQLERMR 303
Query: 338 LHAERSASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPASVKPLALNE 397
A ++ I V VP R+D+LH D++ED+A YGY NI + P + P +
Sbjct: 304 F----GAKALDEETIEVKVPAYRADILHNYDLVEDIAKGYGYENIKVKIPETYTPGKSHP 359
Query: 398 FSDLMRL---EIAMN-GFTEVLTWILCSSK-EISTMLNRQTDESTAVVGNPRTSDFEVVR 452
S L+R EI + G+ EV+ + L S K M ++TD+ T V+ +P + D ++R
Sbjct: 360 IS-LLRAPVNEIMVGLGYYEVMPFTLTSEKINFENMRRQKTDDVTYVL-HPISEDQTMIR 417
Query: 453 TTLMPGILKTIGHNKDHPKPIKIYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELI 512
TTL+P +L+ + N+ P KI+E G+VV + +AA+ + F I
Sbjct: 418 TTLLPNLLEILALNQHRELPQKIFEFGEVV-------NNEITGQHVAAVSIHPQANFTEI 470
Query: 513 HCLVDRIMEVIGTPFVPVGDDTGYYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVL 572
+ +VD +M + P Y ++ S++P FL GR+A + GK +G FG HPEV+
Sbjct: 471 YEVVDALMREMMLP---------YEVKESEDPAFLEGRRADVYVNGKKLGVFGEFHPEVI 521
Query: 573 NNFDISDPCSFMEIDIENFL 592
NNF + E+D+ + +
Sbjct: 522 NNFALGYAVVGFELDLNDLI 541
>sp|Q58508|SYFB_METJA Phenylalanine--tRNA ligase beta subunit OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=pheT PE=3 SV=1
Length = 548
Score = 259 bits (662), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 178/594 (29%), Positives = 297/594 (50%), Gaps = 51/594 (8%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MPT++V + L + E E+ G+E++ + E D
Sbjct: 1 MPTINVKKADLERLVNMPLEDEFIEEKFPMMGVEVEGIF-----------------EEDG 43
Query: 61 EVIYKIEVPANRYDLLCLEGIAQALR-VFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSI 119
E I + + NR D L EG+A+ R + + + KY + + S ++++V E
Sbjct: 44 EKIIQFSINPNRPDYLSAEGLARGFRGIIGIETGLKKYDI----ESSDVKLYV--ENVET 97
Query: 120 RPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALP 179
RPY+ A+++ + D+ S I+LQ+KLH + R R VAIG HD D ++ PF Y+ +
Sbjct: 98 RPYIAMALVKGVIVDDYVLESIINLQEKLHWVMGRDRKKVAIGIHDADKVKPPFYYKEVS 157
Query: 180 PSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPII 239
I FVPL + T E++E ++ + KY H+I++ +P++ D VLS+PPII
Sbjct: 158 GDGIKFVPLNSDEEMTPREILEKHEKGI---KYAHLIKDDK-FPIILDSEGDVLSMPPII 213
Query: 240 NGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKY-QVEPVEVVYADGRS 298
NG + +T +T+N+ I+ T TD + LN +VT +E RKY ++ VEV+ D +S
Sbjct: 214 NGELTRVTTETRNLLIDVTGTDKYAVEKTLNIIVTALAE---RKYGKIHAVEVI-KDNQS 269
Query: 299 YVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPP 358
+YP+L +E + YIN +G +L + + L R +L A+ + I V +P
Sbjct: 270 TIYPNLKEDVLETTSEYINKVLGANLTPGTIINYLRRCRLDAQFVDN-----KIKVFIPA 324
Query: 359 TRSDVLHPCDVMEDVAIAYGYNNIPKRKPASVKPLALNEFS---DLMRLEIAMNGFTEVL 415
R D+ D+ E+VAIAYGYN P LN+ D +R + GF EV+
Sbjct: 325 YRVDIFGEIDIAEEVAIAYGYNKFSGEYPIIGTIGELNQLEKKCDFIREIMVGFGFYEVI 384
Query: 416 TWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIKI 475
+L S+ E+ R D + V P + + +VR +++P +++T+ NK P KI
Sbjct: 385 NLML-SNDEVLFKKMRIEDNNYIEVLKPASIEHRIVRKSILPLLMETLRINKHKELPQKI 443
Query: 476 YEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDDTG 535
+E+GD V++DE + + +++A + + F I V+ ++ +
Sbjct: 444 FEIGDCVVIDENAETKSRVVKKIAGVIVDNETNFNEIKSYVEGLLRELKIE--------- 494
Query: 536 YYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDIE 589
Y + + P F+ GR A I GK +G FG +HPEV+ NF++ P E++IE
Sbjct: 495 YELDNFEHPSFIKGRCAKILKDGKIIGYFGEIHPEVITNFELEFPVVGFELEIE 548
>sp|A7I615|SYFB_METB6 Phenylalanine--tRNA ligase beta subunit OS=Methanoregula boonei
(strain 6A8) GN=pheT PE=3 SV=1
Length = 542
Score = 257 bits (656), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 170/536 (31%), Positives = 277/536 (51%), Gaps = 40/536 (7%)
Query: 57 ENDEEVIYKIEVPANRYDLLCLEGIAQALRVF-NKQQEIPKYTLSDVSKDSMLQMHVKPE 115
E EE +E NR DL +EG A+A+R F + +P+Y + K S ++ + +
Sbjct: 34 ERLEEDHADVEFFPNRPDLFSVEGAARAMRGFLGIETGLPRYMV----KPSGIRFTIDSK 89
Query: 116 TSSIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTY 175
++IRP + AV+R++SFD+ S S + LQ+ LH + R R+ VAIG HDLDT+ PF Y
Sbjct: 90 LAAIRPCLASAVIRNVSFDDESILSVMALQEALHWAVGRGRSKVAIGIHDLDTITPPFHY 149
Query: 176 EALPPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSL 235
A P FVPL T + T D ++E + K + Y I+++ PL+P++ D V S
Sbjct: 150 VASPRVR-KFVPLDFTDELTLDGILEKHP---KGRDYAKIVKDFPLFPLIVDNEDHVCSF 205
Query: 236 PPIINGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYAD 295
PPIING + +T TKN+ ++ T TD + N + T +E +E VE+ A
Sbjct: 206 PPIINGERTRVTTATKNILLDVTGTDQRAVNVAANIICTALAEAGA---TIESVEINGAP 262
Query: 296 GRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVL 355
+PDL+ VS+ + IGV L A ++ LL +M+ AE +G +Q + V
Sbjct: 263 -----FPDLAPAVRTVSVRECSALIGVDLTAPQMAELLEKMRFGAE--PAGPDQ--VRVQ 313
Query: 356 VPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPASV---KPLALNEFSDLMRLEIAMNGFT 412
VP R+D++H D+ EDVAIAYGY N P + K N + R +A G+
Sbjct: 314 VPCYRADIMHDWDLFEDVAIAYGYENFAVEVPPTFSIGKEHPANRIAGQARAILAGLGYL 373
Query: 413 EVLTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKP 472
E++ + L + + + + R + +T + +P + ++ VVRT ++P +L+ + N+ P
Sbjct: 374 EMMPFTLTNERVLCDRMQRPGEPATLRLMHPISEEYTVVRTDIVPLLLEMLQVNRHRELP 433
Query: 473 IKIYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGD 532
+++ GDV+ D+ + R + + GA+ F + D ++ +G
Sbjct: 434 QRLFATGDVI-----ADLLTTQRLAFVSTHAGAD--FSEAYAHADAVLRELG-------- 478
Query: 533 DTGYYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDI 588
Y + SD+ F+ GR+A I GK G FG +HP VL F++ P + E+D+
Sbjct: 479 -VAYSAEVSDDAAFIEGRRADIIVGGKKAGVFGEIHPAVLTAFELEQPVAAFELDL 533
>sp|Q8TPF7|SYFB_METAC Phenylalanine--tRNA ligase beta subunit OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=pheT PE=3 SV=1
Length = 545
Score = 256 bits (653), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 177/560 (31%), Positives = 294/560 (52%), Gaps = 41/560 (7%)
Query: 39 TTEKAIIRKEKHLDEEGDENDEEVIYKIEVPANRYDLLCLEGIAQALRVF-NKQQEIPKY 97
T ++ II++ + + + ++E + IE +R DL +EG A+A+R F + + +P+Y
Sbjct: 17 TDKETIIKRVPMIGADIERVEDEYV-DIEFFPDRPDLYSVEGAARAMRGFLDLETGLPEY 75
Query: 98 TLSDVSKDSMLQMHVKPETSSIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRT 157
+ K + + V IRP++ CAV+R + F +S S +DLQ+ LH + R R
Sbjct: 76 AI----KPYEVSISVSENILKIRPFLGCAVVRGVKFTSSSIKSLMDLQEDLHWGLGRNRK 131
Query: 158 LVAIGTHDLDTLQGPFTYEALPPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIE 217
V+IG HDL +Q PF Y A+ PS FVPL T + +++E + K ++ H+++
Sbjct: 132 KVSIGVHDLKNVQPPFRYMAVDPS-FEFVPLDYTEKMSMTDILEKHP---KGTRFAHLVK 187
Query: 218 NSPLYPVLYDQNRTVLSLPPIINGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFS 277
+ YP++ D N VLS PPIING + +T +T ++FI+ T I LN +VT +
Sbjct: 188 DFEKYPIILDANDNVLSFPPIINGTLTTVTEQTTDLFIDVTGLG-EAVYIALNIVVTALA 246
Query: 278 EYCKRKYQVEPVEVVYADGRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQ 337
E R Q+E V V+ G V PDL ++ + +G+ L EE+ L RM+
Sbjct: 247 E---RGGQIEFVRVIRPGGEELVLPDLEPKERLLTTGEVKALMGMDLTVEEIVKQLERMR 303
Query: 338 LHAERSASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPASVKPLALNE 397
A+ ++ + V VP R+D+LH D++ED+A YGY NI + P + P +
Sbjct: 304 F----GAAALDKEAVEVKVPAYRADILHNYDLVEDIAKGYGYENIKVKVPETYTPGKSHP 359
Query: 398 FSDLMRL---EIAMN-GFTEVLTWILCSSK-EISTMLNRQTDESTAVVGNPRTSDFEVVR 452
S LMR EI + G+ EV+ + L S K M +TD+ T V+ +P + D ++R
Sbjct: 360 IS-LMRASVNEIMVGLGYYEVMPFTLTSEKINFENMCRPKTDDVTYVL-HPISEDQTMIR 417
Query: 453 TTLMPGILKTIGHNKDHPKPIKIYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELI 512
TT++P +L+ + N+ P KI+E G+VV + + +AA+ + F +
Sbjct: 418 TTVLPNLLEILSLNQHRELPQKIFEFGEVV-------SNETTGQHVAAVSIHPQANFTEV 470
Query: 513 HCLVDRIMEVIGTPFVPVGDDTGYYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVL 572
+ +VD +M + P Y ++ S++P FL GR+A + GK +G FG HPEV+
Sbjct: 471 YEVVDALMREMMLP---------YEVKESEDPAFLEGRRADVYVNGKKLGVFGEFHPEVI 521
Query: 573 NNFDISDPCSFMEIDIENFL 592
+NF + E+D+ + +
Sbjct: 522 SNFALGYAVVGFELDLNDLI 541
>sp|A0B993|SYFB_METTP Phenylalanine--tRNA ligase beta subunit OS=Methanosaeta thermophila
(strain DSM 6194 / PT) GN=pheT PE=3 SV=1
Length = 539
Score = 255 bits (652), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 164/527 (31%), Positives = 270/527 (51%), Gaps = 37/527 (7%)
Query: 66 IEVPANRYDLLCLEGIAQALRVF-NKQQEIPKYTLSDVSKDSMLQMHVKPETSSIRPYVV 124
+E +R DL EG+A+AL+ F + +P+Y + S ++M V S+RP +
Sbjct: 44 VEFFPDRPDLYSAEGVARALQGFLGIRPGLPEYQVHTGS----VEMRVDESVKSVRPIIG 99
Query: 125 CAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPPSHIN 184
CAV+R + F + S + LQ+ LH + R R VAIG HD+ ++ PF Y A P
Sbjct: 100 CAVVRGLRFTDPFIESLMSLQEDLHWGLGRNRRKVAIGVHDISRVRPPFRYIAEDPDKRR 159
Query: 185 FVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIINGAHS 244
FVPL + E++E + + Y HI++ +P++ D + VLS PP+ING +
Sbjct: 160 FVPLDFDESMSMREILERHPKGV---AYRHILDGFERFPLIVDADDNVLSFPPVINGELT 216
Query: 245 AITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSYVYPDL 304
+ T ++FI+ T TD + LN +VT +E R ++E V ++ D + ++ PDL
Sbjct: 217 RVREDTTDLFIDVTGTDPVVYR-ALNIVVTALAE---RGGRIEGVRMISPD-KEWISPDL 271
Query: 305 SAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVL 364
S V+ S N IG +L AEE+ L RM+ A + ++ VLVP R+D++
Sbjct: 272 SPARWTVTTSEANSLIGFNLSAEELAECLRRMRFGARHL----DNDSVEVLVPAYRADIM 327
Query: 365 HPCDVMEDVAIAYGYNNIPKRKPASV---KPLALNEFSDLMRLEIAMNGFTEVLTWILCS 421
H D++ED A +YGY N+ P ++ +P + E D +R + G+ EV+ + L +
Sbjct: 328 HTWDIIEDAAKSYGYENLKAEMPRTLTIGRPHPMEELKDEVRDLMVGLGYLEVMPFTLTN 387
Query: 422 SKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIKIYEVGDV 481
K M+ R E T V+ +P + ++RT ++PG+++ + N+ H P +++ VGDV
Sbjct: 388 EKVHFEMMRRSAGECTRVM-HPISELHTIIRTAVLPGLMEILSLNQHHALPQRLFAVGDV 446
Query: 482 VLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDDTGYYIQRS 541
V+ D C +++ GA GF I LV IM + + S
Sbjct: 447 VI-----DGRTKCHLSAVSIHSGA--GFAEISSLVSAIMREL---------RISAEVVES 490
Query: 542 DEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDI 588
+ F+PGR A + G +G FG +HPEV++ F + P ME+++
Sbjct: 491 SDGAFIPGRGADLMLNGARIGCFGEIHPEVISAFGLEHPVVGMELEL 537
>sp|A9CS50|SYFB_ENTBH Probable phenylalanine--tRNA ligase beta subunit OS=Enterocytozoon
bieneusi (strain H348) GN=EBI_21956 PE=3 SV=1
Length = 566
Score = 255 bits (651), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 184/611 (30%), Positives = 298/611 (48%), Gaps = 77/611 (12%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MP +++ + ++ + + +E E + F GIE+D + + +
Sbjct: 1 MPGITISKKDFLNSIHQKLSDDEIEKILFSLGIEMDIICEDTGV---------------- 44
Query: 61 EVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSIR 120
V+YK+++ ANRYDLLCLEG+A+ + + I + S ++Q E+ S R
Sbjct: 45 -VVYKLDIAANRYDLLCLEGLAKIINTYLHGSSIISKPIIRKSSIKVIQ-----ESVSKR 98
Query: 121 PYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQG--PFTYEAL 178
P++ C ++R+ F+ Y FI+ QDKLHQ I R R+ VAIGTHDLD P Y+ +
Sbjct: 99 PFIACGIIRNARFN---YKHFIEYQDKLHQTIGRNRSAVAIGTHDLDKFYNGKPIKYKTI 155
Query: 179 PPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPI 238
+ + F PL + + EL K L +Y+ ++ S ++++ + ++S+PPI
Sbjct: 156 KLNKLCFQPLNISTEIKGTELKT--KLGCHLHQYIDLL-GSDEEGIIFEYDNHIISMPPI 212
Query: 239 INGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRS 298
IN S I T N+FIE T TD K VL M+ F+ +E VE+ +
Sbjct: 213 INSEFSKIEPSTTNIFIEVTGTDYNKVDQVLKLMLLNFNTGI-----IEQVEIQKENSID 267
Query: 299 YVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPP 358
+ P + ++ I IG L+ + + L +MQ E N+Q + +P
Sbjct: 268 -ITPVFNVTPYVFTIDEICKKIGFLLQPDTIKLCLEKMQYAVEIK---NDQL---IAIPS 320
Query: 359 -TRSDVLHPCDVMEDVAIAYGYNNIPKRKPASVKPLA----LNEFSDLMRLEIAMNGFTE 413
R D++ CD++ED+ I YG+ NIP P + LN+FSD +R E+AM GF E
Sbjct: 321 YNRLDIIDKCDIIEDILIGYGFENIPLDNPIEFYTIGKENDLNKFSDKIREEMAMMGFNE 380
Query: 414 VLTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPI 473
+LT L + E + M + + V P++ ++EVVRT+L+PG+ KT+ N++ PI
Sbjct: 381 MLTLTLLNKTE-NIMHDYMVE-----VEYPKSKEYEVVRTSLLPGLFKTLSINQNVKLPI 434
Query: 474 KIYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVP---- 529
+++E+ DVVLLD + +R L + NS E I+EVI + F
Sbjct: 435 QLFEISDVVLLDSYNK--SFNKRFLTGVCAQMNSKLE-------EILEVIISLFKKLNLI 485
Query: 530 ------VGDDTGYYIQRSDEPEFLPGRQASITHKGKH-----VGTFGIVHPEVLNNFDIS 578
+ D +++ E F+ + ASI + +G G+VHP + F IS
Sbjct: 486 VEFTNIITDSDNIFLKEKWEKYFIKNQTASIYVSSYNIPRTLIGCLGVVHPTINMQFKIS 545
Query: 579 DPCSFMEIDIE 589
P S EID+E
Sbjct: 546 LPISAFEIDLE 556
>sp|O26864|SYFB_METTH Phenylalanine--tRNA ligase beta subunit OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pheT PE=1 SV=2
Length = 549
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 169/539 (31%), Positives = 280/539 (51%), Gaps = 34/539 (6%)
Query: 56 DENDEEVIYKIEVPANRYDLLCLEGIAQALRVF-NKQQEIPKYTLSDVSKDSMLQMHVKP 114
D +DE + K+E NR DLL +EG+A++LR F ++ +P Y + DS +++ V
Sbjct: 36 DFDDESI--KVEFFPNRPDLLSVEGVARSLRGFLGIEKGMPSYDV----HDSGVEVTVDE 89
Query: 115 ETSSIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFT 174
+RPY+ AV+ D+ F + ++ Q+ LH I R R VAIG HDLD ++ PF
Sbjct: 90 SVLDVRPYLGMAVIEDVQFTDKKLKQVMEFQEDLHWVIGRDRRKVAIGIHDLDRVEPPFL 149
Query: 175 YEALPPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLS 234
Y + P + F PL + T E++E + K Y H++ + YP++ D+N VLS
Sbjct: 150 YSGVEPEGVTFTPLDSVCEMTPHEILEEHP---KGVSYAHLLRDHDRYPLITDKNGDVLS 206
Query: 235 LPPIINGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYA 294
+PPIING + +T+ T+ + ++ T TD + LN + T F+E R + V V
Sbjct: 207 MPPIINGELTKLTVNTRRILVDVTGTDDRAVRQTLNIICTSFAEAGGR---IGSVRVKRP 263
Query: 295 DGRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINV 354
DG ++ PDL+ M VS+S + G+ L A+EV LL + ++ A R++ +
Sbjct: 264 DGELHL-PDLTPREMRVSVSEASRITGLELSADEVMDLLMKARMDARRTSDD----EVVA 318
Query: 355 LVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKP--ASVKPLALNEFSDLMRLEIAMN-GF 411
++P R D+LH D++E++A+ + I P A++ +D E+ + GF
Sbjct: 319 VIPAYRVDILHEVDLVENIAVQHCIGRIEPELPDIATIAEEDTWSRADASIREVMVGLGF 378
Query: 412 TEVLTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHPK 471
EV++ +L S + + + DE V P + D ++R +L+ G+L+ NK
Sbjct: 379 QEVMSLMLTSEESHYRRMRLEEDERVE-VAQPISQDRTMIRKSLLNGLLEFFEDNKHEDL 437
Query: 472 PIKIYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVG 531
P KI+EVGDVV ++ + + + +LA +++GF I L ++E +G F
Sbjct: 438 PQKIFEVGDVVYINPESETRSRVVTKLACAVTHSSAGFTEIKSLAAAVVENLGYEF---- 493
Query: 532 DDTGYYIQRSDEPEFLPGRQASITHKGKHV---GTFGIVHPEVLNNFDISDPCSFMEID 587
I+ + P F+ GR A+I +GK G FG VHPEV+ NF++ P +EI+
Sbjct: 494 -----RIEPLEHPSFIEGRCAAIESEGKSSAIGGFFGEVHPEVVTNFNLEYPVIALEIE 547
>sp|O28848|SYFB_ARCFU Phenylalanine--tRNA ligase beta subunit OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=pheT PE=3 SV=1
Length = 547
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 177/534 (33%), Positives = 280/534 (52%), Gaps = 42/534 (7%)
Query: 66 IEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSIRPYVVC 125
+E NR DL +EG+A+ALR F I K S + ++ V+ ++RP +V
Sbjct: 43 VEFFPNRPDLYSVEGVARALRGFLG---IEKGLKSYSAVKGEWKITVEESVLAVRPRIVG 99
Query: 126 AVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPPSHINF 185
V++ I + S +++Q+ LH I R R +AIG HDL + P Y+A+ ++ +F
Sbjct: 100 CVVKGIRMTDEVIRSLMEVQEDLHWTIGRNRRKMAIGVHDLSKVYFPLRYKAVD-ANFSF 158
Query: 186 VPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIINGAHSA 245
VPL R+ T E++E + K K Y I+E YP++ D V+S PPIIN +
Sbjct: 159 VPLDFDREMTVAEILEEHP---KGKAYAFILEGKDSYPMIVDSKDEVISFPPIINAEKTR 215
Query: 246 ITLKTKNVFIECTATD--LTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSYVYPD 303
+T +T ++FI+ T D + +A +L M+ R ++E VEVVY D + P+
Sbjct: 216 VTEETTDLFIDVTGFDENVDRAIAILACML------ADRGGRIESVEVVYPD-HVELTPN 268
Query: 304 LSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDV 363
L MEV + +N +G+SL AEE+ L +M+ E + V +PP R+D+
Sbjct: 269 LDVRFMEVDVDEVNSLLGLSLSAEEIKESLEKMRFSCEIEGE-----KLKVGIPPYRADI 323
Query: 364 LHPCDVMEDVAIAYGYNNIPKRKPASVKPLALNEFSDLMRL--EIAMN-GFTEVLTWILC 420
+H DV+EDVAI YGY NI P ++ + ++D+ L EI + GFTEV+T+ L
Sbjct: 324 MHEWDVIEDVAIGYGYENITPEIPPTLTFGRTHPWNDIRSLAKEIMIGLGFTEVITFTLT 383
Query: 421 SSKEISTMLNRQTD--ESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIKIYEV 478
+ + + R+ + + V +P T++ ++RT+L+P +L+ + +NK H P ++EV
Sbjct: 384 NEAVMYEKMRRKGEPWKDYVPVMHPLTTEHTILRTSLLPKLLELLSYNKHHEMPQMVFEV 443
Query: 479 GDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDDTGYYI 538
GDVV V + R LAA + + F I V +M + D + +
Sbjct: 444 GDVV-------VNSKNRLHLAACITHSRANFSEIRSYVQAVMREL---------DLTWEV 487
Query: 539 QRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDIENFL 592
+ SD+ F+ GR+A I GK VG FG VHPEVL F+++ P S EID+ F
Sbjct: 488 RESDDEAFIDGRRAEIVVDGKAVGVFGEVHPEVLEGFELTMPVSAFEIDLSAFF 541
>sp|Q2NGX9|SYFB_METST Phenylalanine--tRNA ligase beta subunit OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=pheT PE=3 SV=1
Length = 559
Score = 253 bits (646), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 172/598 (28%), Positives = 300/598 (50%), Gaps = 55/598 (9%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MP ++ + LF LG+ K+E ++ ++ E+ +
Sbjct: 1 MPVINFTYEELFEQLGEELPKDELINILPMISSDV---------------------ESYD 39
Query: 61 EVIYKIEVPANRYDLLCLEGIAQALRVFNK-QQEIPKYTLSDVSKDSMLQMHVKPETSSI 119
+V K E NR D +EGI ++L+ + + ++ IP+Y DV K + V E +I
Sbjct: 40 DVEVKAEFFPNRPDYYSVEGIVRSLKGYLELEKGIPEY---DVKKTDT-TITVDSELENI 95
Query: 120 RPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALP 179
RPYV C +++++ D+ + ++ Q+ LH I R R VAIG HDLD ++GPF Y+A
Sbjct: 96 RPYVACCMIKNVKIDDNQLRNIMEFQEHLHWVIGRDRKKVAIGIHDLDKVEGPFYYKAGN 155
Query: 180 PSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPII 239
P+ +F+PL+ + T +E++E ++ K +KY +++ YP++ D N ++S+PPII
Sbjct: 156 PNETSFIPLESRENLTLNEILENHE---KGEKYAKLLKEFDKYPLIVDGNGNIMSMPPII 212
Query: 240 NGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSY 299
N + +T KT N+FI+ T TD+ LN + SE +E +EV Y +
Sbjct: 213 NSELTKLTTKTTNLFIDVTGTDINAVTNALNIIAANLSE---NGATIETIEVNYPYHDNK 269
Query: 300 VYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPT 359
YPD ++V IG+ L A+++ L + + +A + N+ + V VP
Sbjct: 270 TYPDFEPKIIDVHTKTAQEYIGIDLTADKIVETLEKTRFNATKI----NEETVRVTVPRY 325
Query: 360 RSDVLHPCDVMEDVAIAYGYNNIPKRKP--ASV-KPLALNEFSDLMRLEIAMNGFTEVLT 416
R D+LH D++E++A+ YG+N +P + P A+V P + +F ++ + FTE+ +
Sbjct: 326 RIDILHEVDIIENIALGYGFNELPAQLPDFATVANPDSKRQFDQILEQVMIGLSFTEIKS 385
Query: 417 WILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIKIY 476
+L S + T L ++ +E V P T D ++R +L+ +L+ + NK P KI+
Sbjct: 386 LMLTSETQHYTKLRKEVEEDRVTVAQPITQDRTMIRKSLINSLLEFLEDNKHEELPQKIF 445
Query: 477 EVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDDTGY 536
E+GDV ++E + ++LAA + + F I +V+ + +G
Sbjct: 446 EIGDVAYINENAETKMVTVKKLAAAQISSVANFTTIKSIVESFVANMGFEM--------- 496
Query: 537 YIQRSDEPEFLPGRQASITHK--GKHV-----GTFGIVHPEVLNNFDISDPCSFMEID 587
++ D+ F+ GR A T K K+ G FG +HPEVL NF++ P E++
Sbjct: 497 ELEDHDDSAFIKGRCAKFTTKPLNKNTPFTFKGYFGEIHPEVLTNFELEYPVIAFEVE 554
>sp|C5A5Z0|SYFB_THEGJ Phenylalanine--tRNA ligase beta subunit OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=pheT PE=3 SV=1
Length = 568
Score = 250 bits (638), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 183/602 (30%), Positives = 285/602 (47%), Gaps = 61/602 (10%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MP V + L +GK +T EE+EDL ELDDV E
Sbjct: 1 MPKFDVSKRDLERLVGKEFTVEEWEDLFLYAKCELDDVWEENG----------------- 43
Query: 61 EVIYKIEVP-ANRYDLLCLEGIAQALR-VFNKQQEIPKYTL--SDVSKDSMLQMHVKPET 116
E+ +K + NR DL EGIA+ +R ++ +P+Y + SDV+ ++V +
Sbjct: 44 EIYFKADSKDTNRPDLWSAEGIARQIRWALGFRRGLPEYEVEKSDVT------VYVDEKL 97
Query: 117 SSIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYE 176
IRPY V A++ + DE + I+LQ+K+ RRR VAIG D D ++ P Y
Sbjct: 98 KDIRPYGVYAIVECLKLDEEALKQMINLQEKVALTFGRRRREVAIGIFDFDKVKPPIYYR 157
Query: 177 ALPPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLP 236
A + FVPL + T +E++E ++ K ++Y H+I++ P YP+L D VLS+P
Sbjct: 158 AAEKTE-KFVPLGFEEELTLEEILEKHE---KGREYGHLIKDKPYYPLLVDSEGKVLSMP 213
Query: 237 PIINGAHSA-ITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYAD 295
PIIN + +T +T+NVF++ T DL K + LN +VT +E R +++ V+VVY D
Sbjct: 214 PIINSETTGRVTTETRNVFVDVTGWDLNKVMLALNVVVTALAE---RGGRIKSVKVVYPD 270
Query: 296 GRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVL 355
P+L+ + EV L YI G+ L E+ LL RM +L
Sbjct: 271 FEIET-PNLTPKSFEVELDYIRKLAGLDLSDGEIKDLLERMMYDVTLEDG-----KAKLL 324
Query: 356 VPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKP---ASVKPLALNEFSDLMRLEIAMNGFT 412
P R D++H DV+EDV IAYGYN I +P + EF D +R + G
Sbjct: 325 YPAFRDDIMHARDVLEDVLIAYGYNEIEPEEPKLAVQGRGDKFIEFEDAVRELMVGFGLQ 384
Query: 413 EVLTWILCSSKEISTMLNRQTDE--------STAVVGNPRTSDFEVVRTTLMPGILKTIG 464
EV+T+ L + + +N + + NP + + +R L+P +L +
Sbjct: 385 EVMTFNLTNREAQYGKMNLEYGRDYFNNPPAELVEIENPISPKWSALRNWLLPSLLDFLS 444
Query: 465 HNKDHPKPIKIYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIG 524
N P +++EVG L+DE ++ +LA + F ++D +M +G
Sbjct: 445 QNTHEEYPQRLFEVGKATLIDESRETKTVSESKLAVVLAQPRVTFTDTKEILDSVMRHLG 504
Query: 525 TPFVPVGDDTGYYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFM 584
Y ++ + P F+PGR + KGK +G G +HP VL + I P +
Sbjct: 505 FE---------YELEEVEHPSFIPGRVGKVIVKGKAIGVIGEIHPSVLEKWGIEMPVAGF 555
Query: 585 EI 586
E+
Sbjct: 556 EL 557
>sp|Q8PTA5|SYFB_METMA Phenylalanine--tRNA ligase beta subunit OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=pheT PE=3 SV=1
Length = 545
Score = 245 bits (625), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 169/560 (30%), Positives = 286/560 (51%), Gaps = 41/560 (7%)
Query: 39 TTEKAIIRKEKHLDEEGDENDEEVIYKIEVPANRYDLLCLEGIAQALRVF-NKQQEIPKY 97
T ++ II++ + + + ++E + IE +R DL +EG A+A+R F + + +P+Y
Sbjct: 17 TDKETIIKRVPMIGADIERVEDEYV-DIEFFPDRPDLYSVEGAARAMRGFLDLETGLPEY 75
Query: 98 TLSDVSKDSMLQMHVKPETSSIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRT 157
+ K + + V + IRP++ CAV+R + F +S S +DLQ+ LH + R R
Sbjct: 76 EI----KPYKVSISVSEDILKIRPFLGCAVVRGVKFTSSSIKSLMDLQEDLHWGLGRNRK 131
Query: 158 LVAIGTHDLDTLQGPFTYEALPPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIE 217
V+IG HDL ++ PF Y A+ P FVPL T + E++E + K ++ H++
Sbjct: 132 KVSIGVHDLKNVKPPFRYMAVDPG-FEFVPLDYTEKMSMTEILEKHP---KGTRFAHLVS 187
Query: 218 NSPLYPVLYDQNRTVLSLPPIINGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFS 277
YP++ D + VLS PPIING +++T +T ++FI+ T LN +VT +
Sbjct: 188 GFEKYPIILDADDNVLSFPPIINGTLTSVTEETTDLFIDVTGLG-EAVYTALNIVVTALA 246
Query: 278 EYCKRKYQVEPVEVVYADGRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQ 337
E R ++E V V+ G V PDL ++ + IG+ L EE+ L RM+
Sbjct: 247 E---RGGEIEFVRVIRPGGEELVLPDLEPEERLLTTGEVKSLIGMELPVEEIVKQLERMR 303
Query: 338 LHAERSASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPASVKPLALNE 397
A ++ + V VP R+D+LH D++ED+A YGY NI + P + ++
Sbjct: 304 F----GACALDKETVEVRVPAYRADILHNYDLVEDIAKGYGYENIKVKIPETYTA-GMSH 358
Query: 398 FSDLMRL---EIAMN-GFTEVLTWILCSSK-EISTMLNRQTDESTAVVGNPRTSDFEVVR 452
LMR EI + G+ EV+ + L S K M +TD+ T V+ +P + D ++R
Sbjct: 359 PISLMRAPVNEIMVGLGYYEVMPFTLTSEKVNFENMCREKTDDVTYVL-HPISEDQTMLR 417
Query: 453 TTLMPGILKTIGHNKDHPKPIKIYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELI 512
TT++P +L+ + N+ P KI+E G+VV + + +AA+ + F +
Sbjct: 418 TTVLPNLLEILALNQHRELPQKIFEFGEVV-------SNETTGQHVAAVSIHPQANFTEV 470
Query: 513 HCLVDRIMEVIGTPFVPVGDDTGYYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVL 572
+ +VD M + Y ++ S +P FL GR+A + GK +G FG + PEV+
Sbjct: 471 YEVVDAFMREMM---------LSYEVKESKDPAFLEGRRADVYVNGKKLGVFGELQPEVI 521
Query: 573 NNFDISDPCSFMEIDIENFL 592
+ F + E+D+ + +
Sbjct: 522 SKFSLGYAVVGFELDLNDLI 541
>sp|A6UWT1|SYFB_META3 Phenylalanine--tRNA ligase beta subunit OS=Methanococcus aeolicus
(strain Nankai-3 / ATCC BAA-1280) GN=pheT PE=3 SV=1
Length = 554
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 172/600 (28%), Positives = 310/600 (51%), Gaps = 57/600 (9%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MPT++V + L + S + + + G+E++++ +EN++
Sbjct: 1 MPTINVNKIDLEKLINMSLSDKTIDHKFPMMGVEVEEIF----------------EENNQ 44
Query: 61 EVIYKIEVPANRYDLLCLEGIAQALRVF-NKQQEIPKYTLSDVSKDSMLQMHVKPETSSI 119
+++ + + +R D L +EG+A+ R F +PKY + S L+++V E
Sbjct: 45 KIV-QFSINPDRPDYLSVEGLARGFRGFIGIDAGLPKYDIYA----SDLEVYV--ENVKS 97
Query: 120 RPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALP 179
RPY A++++I D+ S I+LQ+KLH +I R R +AIG HDLD ++ PF Y+ +
Sbjct: 98 RPYCGFAIIKNIIIDDLVLESIINLQEKLHWSIGRDRKKMAIGIHDLDKIEAPFYYKEIN 157
Query: 180 PSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPII 239
I F PL T E++E ++ + KY H++ +P++ D+N V+S+PPII
Sbjct: 158 GDEIEFEPLGHNELMTPKEVLEKHEKGV---KYAHLLRGDK-FPIIVDKNNAVISMPPII 213
Query: 240 NGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSY 299
NG + + +T+N+ +E T TD + LN +V ++ R+ + ++++ +G
Sbjct: 214 NGNLTKVGTETRNLLVEITGTDKNAVENTLNIIVCALAD---RRGTIFSLKLI-NNGNET 269
Query: 300 VYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPT 359
+ PDL+ + E+++ IN +G++L A E+ + L + + A+ S NI + +P
Sbjct: 270 ISPDLTPDSAEITIDEINTRLGLNLNAGEIIACLKKARYDAQYSYE---DENIKITIPAY 326
Query: 360 RSDVLHPCDVMEDVAIAYGYNNIPKRKPASVKPLALNEFSDL-MRLEIAMN-----GFTE 413
R+D+L+ D+++DVAI YGY N P + E D+ + E N G E
Sbjct: 327 RTDILNNMDIIKDVAINYGYENFNGNLPVVA---TIGEKHDIEKKFEFIRNTMIGYGLFE 383
Query: 414 VLTWILCSSKEISTMLNRQTDESTAV-VGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKP 472
V+ L + + +N +++ V V P + + VVR T++P +L+T+ +NK + P
Sbjct: 384 VMNLTLSNQDVLFNKMNENIEDNEYVEVLKPASIEHRVVRPTILPLLLETLANNKHNELP 443
Query: 473 IKIYEVGDVVLLDEKKD-VGASCRR--RLAALYCGANSGFELIHCLVDRIMEVIGTPFVP 529
KI+EVGD V++DEK + + C+ +++A+ N+ F I LV+ ++ +
Sbjct: 444 QKIFEVGDCVVIDEKDETLYTHCKNVPKVSAVITHHNANFNEIKGLVEGLIREM------ 497
Query: 530 VGDDTGYYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDIE 589
+ Y I P F+ GR A I + VG FG +HPEV+ NF++ P E++I+
Sbjct: 498 ---NIEYSIDNYKHPSFIEGRCAKIIVDDEIVGYFGELHPEVILNFELGYPVVGFEMEIK 554
>sp|A3CT77|SYFB_METMJ Phenylalanine--tRNA ligase beta subunit OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pheT
PE=3 SV=1
Length = 546
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 167/529 (31%), Positives = 265/529 (50%), Gaps = 44/529 (8%)
Query: 66 IEVPANRYDLLCLEGIAQALRVFNKQQE-IPKYTLSDVSKDSMLQMHVKPETSSIRPYVV 124
+E NR DL EG+A+A+R F +E +P YT+ + S + V P + IRP++
Sbjct: 43 VEFFPNRPDLYSPEGVARAMRGFLGIEEGLPAYTV----RPSGIAFSVDPGLADIRPFLG 98
Query: 125 CAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPPSHIN 184
AV+R+++ DE + S + LQ+ LH + R R VAIG HDLDT+ PF Y A P + +
Sbjct: 99 SAVIRNVNLDEEAIESLMALQEALHWAVGRGRGKVAIGVHDLDTVTPPFRYIA-SPRNRS 157
Query: 185 FVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIINGAHS 244
FVPL R+ T +E++ + K + Y H++EN +P++ D VLS PPIING +
Sbjct: 158 FVPLDFEREMTMEEMLADHP---KGRDYAHLVENFDTFPLIVDAENRVLSFPPIINGELT 214
Query: 245 AITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSYVYPDL 304
+T TKN+ ++CT TD +N + T E VE V +G P L
Sbjct: 215 RVTAATKNILLDCTGTDRRAVMTAVNIICTALIEAGAT------VETVTVEGEE--MPTL 266
Query: 305 SAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVL 364
+ VS++ + +G+SL +E+ LL RM+ AE + + +LVP RSD+L
Sbjct: 267 APAERVVSVAECSRLLGLSLTPQEMAGLLRRMRFDAE----PDGDSRVRILVPCYRSDIL 322
Query: 365 HPCDVMEDVAIAYGYNNIPKRKPAS---VKPLALNEFSDLMRLEIAMNGFTEVLTWILCS 421
H D+ EDVAIAYG N PA+ + + + +R + G+ E + + L +
Sbjct: 323 HDWDIFEDVAIAYGIENFDAALPATSTVAQEHPIPAVAGAVRSVMTGLGYLEAIPFTLTN 382
Query: 422 SKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIKIYEVGDV 481
+ + + R+ T + +P + + VVRT L+P +++ + NK P +++ VGDV
Sbjct: 383 ERVLYANMQREPAPGTLRLLHPISEEQTVVRTDLLPLLMEMLLANKHRELPQRLFAVGDV 442
Query: 482 VLLDEKKDVGASCRR--RLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDDTGYYIQ 539
V C ++AA+ + F + D + + Y +
Sbjct: 443 V---------EDCVTYLKVAAVSIHPAADFSEAYAAADVLCRELS---------LSYTVV 484
Query: 540 RSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDI 588
S +P FL GR+ I GK VG FG +HP VL FD+ P + + +D+
Sbjct: 485 ESADPAFLDGRRGDIVVDGKIVGVFGEIHPAVLGAFDLEHPVAALALDL 533
>sp|Q0W0X4|SYFB_UNCMA Phenylalanine--tRNA ligase beta subunit OS=Uncultured methanogenic
archaeon RC-I GN=pheT PE=3 SV=1
Length = 553
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 170/595 (28%), Positives = 280/595 (47%), Gaps = 53/595 (8%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
M TV++ L +G + ++ ++ F G E +D+ +GDE
Sbjct: 1 MATVTLNYPDLVKLIGIDLSLDKVREVMFELGSETEDI---------------QGDE--- 42
Query: 61 EVIYKIEVPANRYDLLCLEGIAQALRVFNKQQ---EIPKYTLSDVSKDSMLQMHVKPETS 117
EV ++R DLL EGIA+ LR + + IPK + S ++ V E
Sbjct: 43 ---VTFEVTSDRADLLSEEGIARMLRAYYSIETGFRIPKL------QPSGYKLIVNREVE 93
Query: 118 SIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQG-PFTYE 176
+RPYV A++R++ F + S S + LQ+KLH R+R A+G HDL ++G Y
Sbjct: 94 PVRPYVTGAIVRNVQFTDESIKSLMHLQEKLHGTFGRKRKKGAVGVHDLSKIKGREIHYR 153
Query: 177 ALPPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLP 236
A+P + FVPL+ T +++ + + Y +++E L P++ D + + S P
Sbjct: 154 AVPGDSVKFVPLQSDELMTLSDVLARHPKGID---YRYVLEGKNLMPIITD-DEGIFSFP 209
Query: 237 PIINGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADG 296
PIIN + +TL T ++ IE T DL +LN + ++S R + ++VVY D
Sbjct: 210 PIINSKRTEVTLNTHDLLIELTGEDLRTIDYMLN--IVLYS-LDLRGASIYSIDVVYPD- 265
Query: 297 RSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLV 356
+ PD + N+++ + Y+N +G+ L A ++ +LL RM + S + V V
Sbjct: 266 ETLHRPDFNVRNIDIEVDYVNRVLGLELTAPDIKALLERMGFKVAETGSDY----LIVEV 321
Query: 357 PPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPASVKPLALNE---FSDLMRLEIAMNGFTE 413
PP R+D+LH DV++DV A+GYNNI P + L E D +R + G +
Sbjct: 322 PPYRADILHKRDVVDDVGRAFGYNNITPSYPNTPSVGKLTEATKLGDAIRNTMIGLGCQD 381
Query: 414 VLTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPI 473
+IL E+ +N D + + NP + +VRT+L+P ++ + +N P
Sbjct: 382 TFNFILIGKDEVFGKMNLPDDGTAVEISNPYAEQYNIVRTSLIPSLMIVLSNNLHRDYPQ 441
Query: 474 KIYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDD 533
I+EVG V LD ++ G +A C A +GF I + + G
Sbjct: 442 NIFEVGTVAHLDSAENTGVKEIDHVACTLCYAKAGFNEIKVKLQSLCANFGKL------- 494
Query: 534 TGYYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDI 588
++ P F+PGR A + K VG G + P VL ++ I P + E++I
Sbjct: 495 DELKTVAAEHPSFIPGRCAEVRIGDKKVGIIGELSPVVLKSWGIEMPVAAFEMEI 549
>sp|Q2FLL1|SYFB_METHJ Phenylalanine--tRNA ligase beta subunit OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=pheT PE=3 SV=1
Length = 545
Score = 238 bits (607), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 166/533 (31%), Positives = 268/533 (50%), Gaps = 52/533 (9%)
Query: 66 IEVPANRYDLLCLEGIAQALRVF---NKQQEIPKYTLSDVSKDSMLQMHVKPETSSIRPY 122
+E +R DL EG+A+A+R F +E+ Y +S S + V +RPY
Sbjct: 43 VEFFPSRVDLYSTEGVARAMRGFLELETGEEV--YPVSP----SSITFSVDENLKEVRPY 96
Query: 123 VVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPPSH 182
+ AV+RDI D + S + +Q+ LH + R R VAIG HDLD + PF Y P +
Sbjct: 97 IGSAVIRDIQLDNEAIISLMGVQEALHWVVGRGRAKVAIGVHDLDKVTPPFRYYGAPVTR 156
Query: 183 INFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIINGA 242
+F+PL R+ T E+ME + K + Y HI+++ P+ P++ D N VLS PPIING
Sbjct: 157 -SFIPLDYDREMTLTEIMEEHP---KGRDYSHIVKDKPVMPLIEDANGNVLSFPPIINGE 212
Query: 243 HSAITLKTKNVFIECTATD----LTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRS 298
+ +T +KN+ ++ T TD +T +++ T++T E V +G
Sbjct: 213 LTRVTESSKNLLLDVTGTDERAVMTALRVLCTTLITAGGR----------CESVTVNG-- 260
Query: 299 YVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPP 358
V PDLS ++++ N +G S A+E+ ++L +M+ AE+S +++ +P
Sbjct: 261 VVMPDLSPALRNINVTSCNKLLGTSFSADEIATILKKMRYGAEKSGDS----TVSIRIPC 316
Query: 359 TRSDVLHPCDVMEDVAIAYGYNNIPKRKPASVKPLA---LNEFSDLMRLEIAMNGFTEVL 415
R+D++H DV EDVAI G+ N+ PA+ + + +R + G+ EV+
Sbjct: 317 YRADIMHEWDVYEDVAIGAGFGNLEAELPATFATGCEHPIIALASAIRDICSGLGYLEVM 376
Query: 416 TWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIKI 475
+ L + + T + R+ D V +P + + +VRT L+P +L + NK P +I
Sbjct: 377 PFTLSNEDVMYTRMQREPDPKALHVLHPISEEQTLVRTDLLPLLLDLLRMNKRRELPQRI 436
Query: 476 YEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDDTG 535
+ GDVV + + LA+ + GA+ F + D +M +G ++P
Sbjct: 437 FHTGDVV-----SSMQTYQKLALASTHPGAD--FSEAYATTDALMRELGISYLPA----- 484
Query: 536 YYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDI 588
S +P F+PGR I GK +G FG +HP VLN FDI P +EID+
Sbjct: 485 ----ESADPAFIPGRAVDIMVDGKKMGVFGEIHPGVLNKFDIDQPVIGIEIDL 533
>sp|A4FWS3|SYFB_METM5 Phenylalanine--tRNA ligase beta subunit OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=pheT PE=3
SV=1
Length = 554
Score = 236 bits (602), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 167/533 (31%), Positives = 272/533 (51%), Gaps = 51/533 (9%)
Query: 71 NRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKP--ETSSIRPYVVCAVL 128
+R D L +EG+A+ R F + + + +L +K E + RPYV A++
Sbjct: 59 DRPDYLSVEGLARGFRGFMG-------ITTGIQEFEVLNSDIKVIVEENETRPYVAFALV 111
Query: 129 RDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPPSHINFVPL 188
+++ DE S I+LQ+KLH I R R +AIG HD D ++ PFTY+ + I FVPL
Sbjct: 112 KNVLMDEFVLESMINLQEKLHWAIGRDRKKLAIGIHDFDKVKAPFTYKEIKGDEIKFVPL 171
Query: 189 K-QTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIINGAHSAIT 247
+ T E++E ++ + KY H+I+N +P++ D N VLS+PPIING + +T
Sbjct: 172 GYEDEKMTPREIIEKHEKGI---KYAHLIQNDK-FPIIVDANGEVLSMPPIINGTLTKVT 227
Query: 248 LKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSYVYPDLSAY 307
+KN+ I+ T T+ + LN +V +E R+ + V+V +G+ YPDLS
Sbjct: 228 PTSKNLLIDITGTEKEAVEETLNIIVCALAE---RRGTIVSVDV---NGKK--YPDLSLK 279
Query: 308 NMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVLHPC 367
+ +S+ IN +G+ L E+ + + + A N+ V +P R+D+LH
Sbjct: 280 SRMISVESINKKLGLELNPGEMIQAVKKSGMDALYE-----DGNLIVKIPAYRNDILHNV 334
Query: 368 DVMEDVAIAYGYNNIPKRKPA-----SVKPL--ALNEFSDLMRLEIAMNGFTEVLTWILC 420
D+ E++AI YGY + P+ S P+ N SDLM I + GF EV+ L
Sbjct: 335 DLKEEIAINYGYEKFEGKLPSVATTGSKDPVEKKCNAMSDLM---IGL-GFYEVMNLTLS 390
Query: 421 SSKEISTMLNRQTDESTAV-VGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIKIYEVG 479
+ + +N + +E + V P + + V+RT+++P +L+T+ NK H P KI+E+G
Sbjct: 391 NQDTLFEKMNLKVEEKDYIEVLKPASIEHRVLRTSILPLLLETLYINKHHSLPQKIFEIG 450
Query: 480 DVVLLDEK-KDVGASCR--RRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDDTGY 536
D V++DE + C+ +++A + F I + ++ +
Sbjct: 451 DCVVIDENDTETDTKCKNIKKIAGAITHPLTNFNEIKSSTEALLRE---------FFEDF 501
Query: 537 YIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDIE 589
+ + P F+PGR A I GK VG FG +HPEV+ NF++ P EI IE
Sbjct: 502 EFENYEHPAFIPGRCAKIIKDGKEVGFFGEIHPEVILNFELEHPIVGFEITIE 554
>sp|Q3ITU5|SYFB_NATPD Phenylalanine--tRNA ligase beta subunit OS=Natronomonas pharaonis
(strain DSM 2160 / ATCC 35678) GN=pheT PE=3 SV=1
Length = 572
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 173/617 (28%), Positives = 287/617 (46%), Gaps = 77/617 (12%)
Query: 1 MPTVSVGRDRL--FAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDEN 58
MP V V D L AA+ + + +E +D F G+E EG+ +
Sbjct: 1 MPVVEVDPDELRSLAAI-EDKSDDELKDDLFALGLEF------------------EGESD 41
Query: 59 DEEVIYKIEVPANRYDLLCLEGIAQALRV---FNKQQEIPKYTLSDVSKDSMLQMHVKPE 115
D + +++E +R D L +EGIA++LR ++ ++PK + D+ + V
Sbjct: 42 DGD--FELEFAPDRLDRLSVEGIARSLRYQYGHDRGIDVPK------TNDAEWTITVDES 93
Query: 116 TSSIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQG---- 171
RPYV AV+R + D+ +S I LQ+KLH + R R AIG HDL L+G
Sbjct: 94 VPEARPYVTGAVVRGLDLDDTQLDSLIQLQEKLHATMGRNRAKGAIGVHDLTMLKGGGAR 153
Query: 172 -------PFTYEALPPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPV 224
TY + P FVPL + T E+++ + + + Y H+++ +P
Sbjct: 154 SDGKPSKSITYRGVDPDGDRFVPLDDDAERTPAEVLDAHPTG---ETYGHLVDGLDRFPA 210
Query: 225 LYDQNRTVLSLPPIINGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFS-EYCKRK 283
+YD + + S PP+ING+ + + T+++FIE T TD + ++ M+ I R
Sbjct: 211 IYD-DIGLFSFPPVINGSRTEVDTGTRDLFIELTGTD----QWTIDRMLAIICYALSARG 265
Query: 284 YQVEPVEVVYADGRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERS 343
++E V V Y D R+ PDLS VS I T+GV L +V LL R L AE
Sbjct: 266 GRIESVAVDYGD-RTLTRPDLSTTTKTVSHDRIETTLGVDLAGTDVVDLLERSGLDAEAD 324
Query: 344 ASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPASVKPLALNEFS---D 400
G + + +P R DVLHP D+++DV A+G+N + + P ++ S D
Sbjct: 325 TEGELTYEVE--IPAYRVDVLHPADIVDDVGRAFGFNELEPQYPDVSTVGGRHDRSRLED 382
Query: 401 LMRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDESTA------VVGNPRTSDFEVVRTT 454
+R + GF ++L + + S E+ ++ D++ + P + D+ VVRT
Sbjct: 383 AVRNTLVGLGFEDLLNFYMTSETELFDRMSLSPDDNAVGAREPPTITEPYSEDYTVVRTW 442
Query: 455 LMPGILKTIGHNKDHPKPIKIYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHC 514
+P +L + +N P + E+G V +DE K + R +A + ++ +E
Sbjct: 443 ALPSLLMVLENNTHRAYPQDLAEIGLVAGVDESKPTNVAEHRSVAGVVARTDASYEDAKA 502
Query: 515 LVDRIMEVIGTPFVPVGDDTGYYIQR--SDEPEFLPGRQASITHKGKHVGTFGIVHPEVL 572
++ IG+ F G I+ +D P F+ GR A++ G+ G G +HP VL
Sbjct: 503 R----LQAIGSAF-------GVDIKTPPTDHPSFIDGRTAAVVIDGEPAGVIGELHPRVL 551
Query: 573 NNFDISDPCSFMEIDIE 589
D+ P + E ++
Sbjct: 552 VEHDLEVPVAGFEFRLD 568
>sp|A6VGJ4|SYFB_METM7 Phenylalanine--tRNA ligase beta subunit OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=pheT PE=3
SV=1
Length = 554
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 168/534 (31%), Positives = 273/534 (51%), Gaps = 53/534 (9%)
Query: 71 NRYDLLCLEGIAQALRVF-NKQQEIPKYTL--SDVSKDSMLQMHVKPETSSIRPYVVCAV 127
+R D L +EG+A+ R F I ++ + SD+ V E + RPYV A+
Sbjct: 59 DRPDYLSVEGLARGFRGFMGITTGIQEFEVLPSDIK--------VTVEENKTRPYVAFAL 110
Query: 128 LRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPPSHINFVP 187
++++ DE S I+LQ+KLH I R R +AIG HD D ++ PFTY+ + I FVP
Sbjct: 111 VKNVLMDELVLESMINLQEKLHWAIGRDRKKLAIGIHDFDKVKAPFTYKEIKGDEIKFVP 170
Query: 188 LK-QTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIINGAHSAI 246
L + + T E++E ++ + KY H+I++ +P++ D N VLSLPPIING + +
Sbjct: 171 LGYEDEEMTPREIIEKHEKGI---KYAHLIQDD-RFPIIVDVNGEVLSLPPIINGTLTKV 226
Query: 247 TLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSYVYPDLSA 306
T +KN+ I+ T T+ + LN +V +E R+ + V V +G+ YPDL+
Sbjct: 227 TPTSKNLLIDITGTEKEAVEETLNIIVCALAE---RRGTIVSVNV---NGKK--YPDLTL 278
Query: 307 YNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVLHP 366
+ +S+ IN +G+ L E+ + + + A N+ V +P R+D+LH
Sbjct: 279 KSRIISIESINKKLGLELNPGEIIQAVKKSGMDALYE-----DGNLIVKIPAYRNDILHN 333
Query: 367 CDVMEDVAIAYGYNNIPKRKPA-----SVKPL--ALNEFSDLMRLEIAMNGFTEVLTWIL 419
D+ E++AI YGY + P+ S P+ N SDLM I + GF EV+ L
Sbjct: 334 VDLKEEIAINYGYEKFEGKLPSVATTGSKDPVEKKCNAMSDLM---IGL-GFYEVMNLTL 389
Query: 420 CSSKEISTMLNRQTDESTAV-VGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIKIYEV 478
+ + +N + +E + V P + + V+RT+++P +L+T+ NK H P KI+E+
Sbjct: 390 SNQDTLFEKMNLKVEEKDYIEVLKPASIEHRVLRTSILPLLLETLYINKHHSLPQKIFEI 449
Query: 479 GDVVLLDEK-KDVGASCR--RRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDDTG 535
GD V++DE + C+ +++A + F I + ++
Sbjct: 450 GDCVIIDENDTETDTKCKNIKKIAGAITHPLTNFNEIKSSTEALLRE---------FFED 500
Query: 536 YYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDIE 589
+ + + P F+PGR A I GK VG FG +HPEV+ NF++ P EI IE
Sbjct: 501 FEFENYEHPAFIPGRCAKIIKDGKEVGFFGEIHPEVILNFELEHPIVGFEITIE 554
>sp|Q6LXU2|SYFB_METMP Phenylalanine--tRNA ligase beta subunit OS=Methanococcus
maripaludis (strain S2 / LL) GN=pheT PE=3 SV=1
Length = 554
Score = 233 bits (593), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 273/532 (51%), Gaps = 49/532 (9%)
Query: 71 NRYDLLCLEGIAQALRVF-NKQQEIPKYTLSDVSKDSMLQMHVKPETSSIRPYVVCAVLR 129
+R D L +EG+A+ R F I ++ + D + V E + RPYV A+++
Sbjct: 59 DRPDYLSVEGLARGFRGFMGITTGIQEFEVLDSD------IKVTVEENETRPYVAFALVK 112
Query: 130 DISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPPSHINFVPLK 189
++ DE S I+LQ+KLH I R R +AIG HD D ++ PFTY+ + I FVPL
Sbjct: 113 NVLMDEFVLESMINLQEKLHWAIGRDRKKLAIGIHDFDKVKAPFTYKEIKGDEIKFVPLG 172
Query: 190 -QTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIINGAHSAITL 248
+ + T E++E ++ + KY H+I+N +P++ D N VLSLPPIING + +T
Sbjct: 173 YEDEEMTPREIIEKHEKGI---KYAHLIQNDK-FPIILDANGEVLSLPPIINGTLTKVTP 228
Query: 249 KTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSYVYPDLSAYN 308
+KN+ I+ T T+ + LN +V E R+ + V V +G+ YPDL+ +
Sbjct: 229 TSKNLLIDITGTEKEAVEETLNIIVCALVE---RRGTIVSVNV---NGKK--YPDLTPKS 280
Query: 309 MEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVLHPCD 368
+S+ IN +G++L E+ L + + A N+ V +P R+D+L D
Sbjct: 281 RIISVESINKKLGLNLNPGEIIQALKKSGMDALYE-----DGNLIVKIPAYRNDILQNVD 335
Query: 369 VMEDVAIAYGYNNIPKRKPA-----SVKPL--ALNEFSDLMRLEIAMNGFTEVLTWILCS 421
+ E++AI YGY + P+ S P+ + SDLM I + GF EV+ L +
Sbjct: 336 LKEEIAINYGYEKFDGKLPSVATTGSKDPVEKKCSAMSDLM---IGL-GFYEVMNLTLSN 391
Query: 422 SKEISTMLNRQTDESTAV-VGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIKIYEVGD 480
+ +N + DE + V P + + V+RT+++P +L+T+ NK + P KI+EVGD
Sbjct: 392 QDTLFEKMNLKVDEKDYIEVLKPASIEHRVLRTSILPLLLETLYINKHNALPQKIFEVGD 451
Query: 481 VVLLDEK-KDVGASCR--RRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDDTGYY 537
V++DE+ + C+ +++A + F I + ++ G+
Sbjct: 452 CVVIDEEDTETDTKCKNIKKIAGAITHPLTNFNEIKSSTEALLREF---------FEGFE 502
Query: 538 IQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDIE 589
+ + P F+PGR A I GK VG FG +HPEV+ NF++ P EI IE
Sbjct: 503 FENYEHPAFIPGRCAKILKSGKEVGFFGEIHPEVILNFELEHPVVGFEITIE 554
>sp|A9AA58|SYFB_METM6 Phenylalanine--tRNA ligase beta subunit OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=pheT PE=3
SV=1
Length = 554
Score = 229 bits (585), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 166/536 (30%), Positives = 271/536 (50%), Gaps = 57/536 (10%)
Query: 71 NRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKP--ETSSIRPYVVCAVL 128
+R D L +EG+A+ R F + + + +L ++K E + RPYV A++
Sbjct: 59 DRPDYLSVEGLARGFRGFMGIN-------TGIQEFEVLNSNIKVTVEENKTRPYVAFALV 111
Query: 129 RDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPPSHINFVPL 188
+++ DE S I+LQ+KLH I R R +AIG HD D ++ PFTY+ + I FVPL
Sbjct: 112 KNVLMDELVLESMINLQEKLHWAIGRDRKKLAIGIHDFDKVKAPFTYKEIRGDEIKFVPL 171
Query: 189 K-QTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIINGAHSAIT 247
+ + T E++E ++ + KY H+I++ +PV+ D N VLS+PPIING + +T
Sbjct: 172 GYEDEEMTPREIIEKHEKGI---KYAHLIQDDK-FPVIVDLNGEVLSMPPIINGTLTKVT 227
Query: 248 LKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSYVYPDLSAY 307
+KN+ I+ T T+ + LN +V +E R+ + V+V +G+ YPDL+
Sbjct: 228 PTSKNLLIDITGTEKEAVEETLNIIVCALAE---RRGTIVSVDV---NGKK--YPDLTPK 279
Query: 308 NMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVLHPC 367
+ +S+ IN +G++L E+ + + + A N+ V +P R+D+LH
Sbjct: 280 SRMISVESINKKLGLNLNPGEIIQAVKKSGMDALYE-----DGNLIVKIPAYRNDILHNV 334
Query: 368 DVMEDVAIAYGYNNIPKRKPA----SVKPLALNEFSDLMRLEIAMNGFTEVLTWILCSSK 423
D+ E++AI YGY + P+ K + S + L I + GF EV+ L +
Sbjct: 335 DLKEEIAINYGYEKFEGKLPSVATTGSKDSVEKKCSAMSDLMIGL-GFYEVMNLTLSNQD 393
Query: 424 EISTMLNRQTDESTAV-VGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIKIYEVGDVV 482
+ +N + +E + V P + + V+RT+++P +L+T+ NK H P KI+E+GD V
Sbjct: 394 TLFEKMNLEVEEKDYIEVLKPASIEHRVLRTSILPLLLETLYINKHHSLPQKIFEIGDCV 453
Query: 483 LLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDDTGYYIQRS- 541
++DE D + + GA + H L T F + TG ++
Sbjct: 454 IIDE-NDTETDTKCKNIKKIAGA-----ITHPL---------TNFNEIKSSTGALLREFF 498
Query: 542 --------DEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDIE 589
+ P F+PGR A I K VG FG +HPEV+ NF++ P EI IE
Sbjct: 499 EDFEFENYEHPAFIPGRCAKIIKDRKEVGFFGEIHPEVILNFELEHPIVGFEITIE 554
>sp|A2ST82|SYFB_METLZ Phenylalanine--tRNA ligase beta subunit OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=pheT
PE=3 SV=1
Length = 540
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 161/543 (29%), Positives = 273/543 (50%), Gaps = 46/543 (8%)
Query: 57 ENDEEVIYKIEVPANRYDLLCLEGIAQALRVF-NKQQEIPKYTLSDVSKDSMLQMHVKPE 115
E +EE ++ NR DL EG A+ALR + + +P Y + K S + V P+
Sbjct: 34 EREEEKQTDVQFFPNRPDLYSAEGTARALRGYLGIETGLPTYEV----KPSGISFSVDPK 89
Query: 116 TSSIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTY 175
++IRPY+ AV+R++ D A S + LQ+ LH + R R VAIG HDLD ++GPF+Y
Sbjct: 90 LANIRPYLGSAVIRNVHMDNAMIESLMGLQESLHWAVGRGRKKVAIGVHDLDKIEGPFSY 149
Query: 176 EALPPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSL 235
A FVPL + T +E++ + K K Y I+E +P++ D V S
Sbjct: 150 IA-ADRKTTFVPLDYDVEMTMEEILAEHP---KGKAYARIVEEFERFPLITDAKGRVCSF 205
Query: 236 PPIINGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYAD 295
PPIING + +T T+N+ ++ T + + + + F E ++E VE+ D
Sbjct: 206 PPIINGELTRVTEDTQNILLDVTGIEPRAVSVAVKILCAAFVEMGA---EIESVEI---D 259
Query: 296 GRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVL 355
G V PDL VS+S + G+ + A ++T LL +M+ AE ++ ++V
Sbjct: 260 G--VVSPDLRPEKRTVSVSECSKLTGIPMTASQMTELLMKMRFGAEVI----DEDTVSVD 313
Query: 356 VPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPASV---KPLALNEFSDLMRLEIAMNGFT 412
+P R+D++H DV ED AIAYGY+ I P S KP + + L+R + +
Sbjct: 314 IPCYRADIMHDHDVYEDAAIAYGYDKIETSLPPSFTVGKPHPVQKLYSLVRNIMVGLSYI 373
Query: 413 EVLTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKP 472
E + L S ++++R + + V +P + D ++RT ++P +++++ N+ P
Sbjct: 374 ENTPFTLTSGDVSYSLMHRPENPAALHVLHPISEDQTIIRTDILPLLMESLSINRSRELP 433
Query: 473 IKIYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVD---RIMEVIGTPFVP 529
KI+ GDVV +++ + A+++ A+ F I+ ++D R+M +
Sbjct: 434 QKIFACGDVV-----ENLVTYPKMAAASIHTSAD--FSEIYAVMDAFCRMMSI------- 479
Query: 530 VGDDTGYYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDIE 589
Y ++ S + F+PGR+ I G+ +G FG ++P+VL F + EID+
Sbjct: 480 -----EYEVRDSADDAFIPGRRGDIYVSGEKIGVFGEINPDVLVGFGLEHQAVAFEIDLR 534
Query: 590 NFL 592
F+
Sbjct: 535 GFV 537
>sp|B9LU47|SYFB_HALLT Phenylalanine--tRNA ligase beta subunit OS=Halorubrum lacusprofundi
(strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34)
GN=pheT PE=3 SV=1
Length = 578
Score = 226 bits (575), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 172/623 (27%), Positives = 279/623 (44%), Gaps = 82/623 (13%)
Query: 1 MPTVSVGRDRLFAALGKSYTK-EEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDEND 59
MP V + D L G++ T EEF++ F G+E EG E D
Sbjct: 1 MPVVDIDTDELRGLTGRTDTSDEEFKEDLFGLGLEF------------------EG-ETD 41
Query: 60 EEVIYKIEVPANRYDLLCLEGIAQALRVF---NKQQEIPKYTLSDVSKDSMLQMHVKPET 116
E+++ + E +R D L +EG+A++LR ++ +P+ + D + V
Sbjct: 42 EDLL-QFEFAPDRLDRLSVEGVARSLRYHYGDDRGVYVPE------TNDPEWTIEVDESV 94
Query: 117 SSIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGP---- 172
RPYV AV+R + DE + +S I LQ+KLH + R R AIG HDL ++G
Sbjct: 95 PDERPYVTGAVIRGVDLDEGALDSLIQLQEKLHATMGRGRAKGAIGIHDLAMVKGAPLQE 154
Query: 173 -----FTYEALPPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYD 227
TY + P ++FVPL + T +E++ + + + Y ++E YP +YD
Sbjct: 155 GSEPSITYRGVDPDGVSFVPLDANDELTPNEVLAEHDTG---QTYADLVEGLDRYPAIYD 211
Query: 228 QNRTVLSLPPIINGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVE 287
+ + S PP+ING + +T ++ +F+E T TD + N + S R +E
Sbjct: 212 E-LGLFSFPPVINGKRTEVTTGSRELFVELTGTDQWTIDRMCNIVCYALS---ARGATIE 267
Query: 288 PVEVVYADGRS--------YVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLH 339
VEV YADG + V P+ VS I +GV E EE+ R L
Sbjct: 268 QVEVNYADGATAPSEYGAELVRPNFDTDEKSVSHDRIETLLGVDFEPEEIVDCFERAGLD 327
Query: 340 AERSASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPASVKPLALNEFS 399
A S + + V +PP R DVLHP D+++DV AYG++N+ R P +E S
Sbjct: 328 A--SYTLDEDVTYEVEIPPYRVDVLHPLDLVDDVGRAYGFDNLEPRYPDVGTVGGRHERS 385
Query: 400 ---DLMRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDESTAVVGN------PRTSDFEV 450
D +R + GF ++L + + S E +N + GN P + ++
Sbjct: 386 RLEDAVRTSLVGLGFEDLLNFHMTSGTENYDRMNLEAGSDAFGGGNPVEITEPYSEEYTQ 445
Query: 451 VRTTLMPGILKTIGHNKDHPKPIKIYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFE 510
+RT +P ++ + N + P + EVG D+ ++ + RR +A ++ +E
Sbjct: 446 LRTWAIPSLVMLLERNTHNAYPQDVAEVGFAAERDDSENTNVAERRHVAGAVARRDASYE 505
Query: 511 L----IHCLVDRIMEVIGTPFVPVGDDTGYYIQRSDEPEFLPGRQASITHKGKHVGTFGI 566
+ + D + TP R++ P F+ GR A++ G+ VG G
Sbjct: 506 AAKGRLQAVCDDFRAELETP-------------RTEHPSFIDGRTAAVVIDGEVVGVIGE 552
Query: 567 VHPEVLNNFDISDPCSFMEIDIE 589
VHP VL D+ P + E ++
Sbjct: 553 VHPAVLVEHDLEVPVAAFEFHLD 575
>sp|A6UPQ4|SYFB_METVS Phenylalanine--tRNA ligase beta subunit OS=Methanococcus vannielii
(strain SB / ATCC 35089 / DSM 1224) GN=pheT PE=3 SV=1
Length = 554
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 158/536 (29%), Positives = 265/536 (49%), Gaps = 41/536 (7%)
Query: 63 IYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSIRPY 122
I + + +R D L +EG+A+ R F + DV + +V + RPY
Sbjct: 51 IIQFSINPDRPDYLSVEGLARGFRGFMGIN--TGFQQFDVYESDT---NVTVLDNESRPY 105
Query: 123 VVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPPSH 182
+ A+++++ DE S I+LQ+KLH + R R +AIG HD D ++GPFTY+ +
Sbjct: 106 IAFALVKNVQMDEMVLESIINLQEKLHWALGRDRKKLAIGVHDFDMVKGPFTYKEIKGDE 165
Query: 183 INFVPLK-QTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIING 241
I F PL + + T E++E ++ K +KY +I++ +P++ D VLS+PPIING
Sbjct: 166 IKFAPLGYDSEEMTPKEILEKHE---KGQKYGKLIKDGK-FPIIVDSKNNVLSMPPIING 221
Query: 242 AHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSYVY 301
+ +T +KN+ I+ T T+ + LN V E Y V +G+ Y
Sbjct: 222 TLTKVTKNSKNLLIDITGTEKEAVEEALNIFVCSLFERSGTIYSVN------VNGKR--Y 273
Query: 302 PDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRS 361
PDL+ E+S+ IN +G+ L A E+ S L + ++ + + V +P R+
Sbjct: 274 PDLTPRYREISIDLINKKLGLELNAGEIISALKKARMDVKFENE-----KLMVKIPAYRN 328
Query: 362 DVLHPCDVMEDVAIAYGYNNIPKRKPASVKPLALNEFSDLMRL---EIAMNGFTEVLTWI 418
D+LH D+ E+VA +GY + P+ + N + + GF EV+
Sbjct: 329 DILHNVDLKEEVAKNHGYEKFEGKLPSIATTGSRNPIEKKCKHYQNTMLGFGFFEVMNLT 388
Query: 419 LCSSKEISTMLNRQTDESTAV-VGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIKIYE 477
L + + + +N + E V V P + + V+RT+++P +L+T+ NK + P KI+E
Sbjct: 389 LSNQETLFEKMNLKYSEKDYVEVLKPASIEHRVLRTSILPMLLETLFINKHNVLPQKIFE 448
Query: 478 VGDVVLLDE---KKDVGASCRRRLAALYCGANSGFELIHCLVDRIM-EVIGTPFVPVGDD 533
+GD VL+DE K D ++++ + F I + + ++ E G
Sbjct: 449 IGDCVLIDENDTKTDTKCKNIKKISCAVVHPLTNFNEIKTVTEGLLRETFGE-------- 500
Query: 534 TGYYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDIE 589
+ I+ + P F+ GR A I + GK +G FG +HPEV+ NF++ P EI IE
Sbjct: 501 --FEIENYEHPSFISGRCAKILNNGKEIGFFGEIHPEVILNFELEHPIVAFEILIE 554
>sp|Q8TX56|SYFB_METKA Phenylalanine--tRNA ligase beta subunit OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
GN=pheT PE=3 SV=1
Length = 590
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 166/624 (26%), Positives = 287/624 (45%), Gaps = 79/624 (12%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEF-EDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDEND 59
MP V++ D+L LG+ + EE +L G +++ + ++
Sbjct: 1 MPVVTIHYDKLVKILGREVSFEELAHNLIPMLGSDVERI-------------------DE 41
Query: 60 EEVIYKIEVPANRYDLLCLEGIAQALRVF-NKQQEIPKYTLSDVSKDSMLQMHVKPETSS 118
E++ + E NR DL +EG+A+AL+ F + IP+Y + + S ++ V+
Sbjct: 42 REMVIETEFFPNRPDLYSVEGVARALKGFLGIETGIPEYNV----RRSDVEARVEESVLD 97
Query: 119 IRPYVVCAVLRDISF-DEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEA 177
RP + AV+R + F DE ++ Q+ LH I R R AIG HD + ++ P Y
Sbjct: 98 ARPCLAVAVVRGVEFEDERDLEHLMEFQEHLHWVIGRDRKKAAIGIHDFEAVEPPLRYFL 157
Query: 178 LPPS--HINFVPLKQTRDFTADEL--MEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVL 233
P+ F PL D +E+ E + K ++Y H++ + P+L D+ V+
Sbjct: 158 ADPNDRSWAFEPL----DHPGEEMTPAEVLRRHEKGRQYAHLVSDGA--PILADEE-GVI 210
Query: 234 SLPPIINGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVY 293
S PP+IN + +T T ++ I+ T TD + VL+ + I +R ++ VE++
Sbjct: 211 SFPPVINSERTRVTQDTTDLLIDVTGTDW---RSVLDALHVIVCNLAERGAEILTVEILG 267
Query: 294 ADGRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQ---- 349
A R+ +L +++ VS + +G+ L E++ LL R + A G +
Sbjct: 268 AYERTTPTMELDVWDVPVSEA--RKLLGIDLSGEQLEELLERARHGAIFVPEGERELREY 325
Query: 350 -----------WN-----------INVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKP 387
W + V V P R+++LH D++ED I Y Y+ P
Sbjct: 326 PLPDVYHIEADWREIPPILYEEDVVRVFVGPRRTNILHEWDLIEDAGIMYNYDRFEPTVP 385
Query: 388 ASVKPLALN---EFSDLMRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDESTAVVGNPR 444
P + EF +++R +A F EV + L S +E + + D + NP
Sbjct: 386 DFYTPSRADREREFINVVRDTLARMKFVEVNSLTLISPEENYRKMRLEPDGRAVKLANPI 445
Query: 445 TSDFEVVRTTLMPGILKTIGHNKDHPKPIKIYEVGDVVLLDEKKDVGASCRRRLAALYCG 504
++ +VRT ++P +++ + NK P P +++E+G+V+ DE + GA R +LA G
Sbjct: 446 QKEYTIVRTWILPSLMRFLADNKHRPYPQRVFELGEVIERDEDAETGAKDRWKLALAIAG 505
Query: 505 ANSGFELIHCLVDRIMEVIGTPFVPVGDDTGYYIQRSDEPEFLPGRQASITHKGKHVGTF 564
GF I +V+ ++ + D TG+ I F+ GR A++ G+ +G F
Sbjct: 506 PGVGFSEIKSVVEALLREL--------DVTGWEITERKHRSFINGRCAAVLADGRELGFF 557
Query: 565 GIVHPEVLNNFDISDPCSFMEIDI 588
G +HPEVL FD+ P E D+
Sbjct: 558 GEIHPEVLTEFDLEVPVVGGEFDV 581
>sp|B8GEX4|SYFB_METPE Phenylalanine--tRNA ligase beta subunit OS=Methanosphaerula
palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c)
GN=pheT PE=3 SV=1
Length = 546
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/526 (30%), Positives = 258/526 (49%), Gaps = 38/526 (7%)
Query: 66 IEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSIRPYVVC 125
+E +R DL EG+A+A+R F I +++ K S + + P IRP++
Sbjct: 43 VEFFPDRPDLFSTEGVARAMRGFLG---IETGSVTYEVKPSGVSFTIDPALKEIRPFLGS 99
Query: 126 AVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPPSHINF 185
AV+R +S E + S + LQ+ LH I R R +AIG HDLD + PF Y A S +F
Sbjct: 100 AVIRGLSLSEEAIQSLMGLQEALHWAIGRGRKKMAIGLHDLDKITPPFRYCAAEKSR-SF 158
Query: 186 VPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIINGAHSA 245
VPL T T +++++ + K + Y H++ P YP++ D V S PPIING +
Sbjct: 159 VPLDFTEPMTMEQMLDEHP---KGRAYAHLVREHPRYPLIVDAEDRVCSFPPIINGDLTR 215
Query: 246 ITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSYVYPDLS 305
+T +TKN+ ++ T TD ++ + + E VE V DG PDLS
Sbjct: 216 VTTETKNILLDTTGTDQRAVEVTVKIVCAALVEAGGT------VESVTIDGVE--SPDLS 267
Query: 306 AYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVLH 365
VS+ N +G+SL A E+ +LL +M+ A + G ++ I V VP R+D++H
Sbjct: 268 PSVRTVSVDEGNKLLGLSLTAPEMATLLEKMRFKA--TPDGTDR--IRVEVPCYRADIMH 323
Query: 366 PCDVMEDVAIAYGYNNIPKRKPASVKPLALNEFSDL---MRLEIAMNGFTEVLTWILCSS 422
D+ EDVA+AYGY N P + ++ S + +R + G+ EV+ + L S
Sbjct: 324 DWDIFEDVAVAYGYENFDATLPETSTIGEQSQVSVIGGAVREILTGLGYHEVMPFTLTSE 383
Query: 423 KEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIKIYEVGDVV 482
++ R+ + + +P T D +VRT L+P +L+ + N+ P +I+ GDVV
Sbjct: 384 TVTYDLMQRERSPTALHLLHPITEDQTIVRTDLLPLLLELLQMNRYRELPQRIFCTGDVV 443
Query: 483 LLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDDTGYYIQRSD 542
G S ++ AA+ C + F + D + + P Y S
Sbjct: 444 -------EGISTHQKAAAVSCHGAADFSEAYAAADALCRDLNLP---------YTTAEST 487
Query: 543 EPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDI 588
+P F+ GR+ I G VG FG + P V+ F++ P + +E+D+
Sbjct: 488 DPAFIDGRRGDIIVDGTTVGVFGEISPRVILGFELDHPIAAVELDL 533
>sp|Q971D8|SYFB_SULTO Phenylalanine--tRNA ligase beta subunit OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=pheT
PE=3 SV=1
Length = 540
Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 168/593 (28%), Positives = 274/593 (46%), Gaps = 69/593 (11%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MPT+++ + RL L S T + EDL F E+ K +D++ E
Sbjct: 1 MPTINIYKWRLLNELKISET--QLEDLLFNLKSEM-------------KPIDQDHIE--- 42
Query: 61 EVIYKIEVPANRYDLLCLEGIAQALR-VFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSI 119
IE+ +R DLL + GI ++++ + K+ P+Y++ D D + ++ P
Sbjct: 43 -----IEINNDRPDLLFVYGIIRSIKGLLKKELGEPRYSVKDT--DYVFEIKEVPS---- 91
Query: 120 RPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALP 179
RPY + AV+ DI FD+ I Q+KLH + R+R +AIG HDL +
Sbjct: 92 RPYALAAVVEDIKFDDELLKELIQFQEKLHITVGRKRKKIAIGLHDLKKIDSKHIIYTTV 151
Query: 180 PSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPII 239
F+PL ++ + E++E S + K+Y +I P + + +LSLPP+I
Sbjct: 152 NLDYKFIPLNSDKEMSVREILE---STPQGKEYGNISLLDGKMPAIMQDDGQILSLPPVI 208
Query: 240 NGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSY 299
N + I KT+++FI+ T T L L+ +VT +E + +++ + Y D
Sbjct: 209 NSEKTRINSKTQSLFIDVTGTSLDTVIFTLDVIVTNLAEMGGKIGRIKVIS-PYVDNS-- 265
Query: 300 VYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPT 359
P L +++++ YIN +G +L E+ L + I V++PP
Sbjct: 266 --PLLQHKSIKITAEYINKILGTNLNKNEIIEYLKMARFDVNDLGK-----EIEVIIPPY 318
Query: 360 RSDVLHPCDVMEDVAIAYGYNNIPKRKPASVKPLALNEFSDLMRLEIAM------NGFTE 413
R+D+L D+ E+VAI YGYNN+ P K + SD +L + GFTE
Sbjct: 319 RNDILSQIDITEEVAITYGYNNL---SPTPYKIEKIGSLSDRTKLIRVLRDLSVGGGFTE 375
Query: 414 VLTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPI 473
+ T+ L S S +L + NP T D+ VR +L+P IL + N+ PI
Sbjct: 376 IFTFTLISE---SLLLG-----DFVKILNPITVDYNSVRNSLLPSILIFLSKNQHARMPI 427
Query: 474 KIYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDD 533
+++E+GDVV+ +E + G S + A + FE + + I+ +G P+
Sbjct: 428 RVFEIGDVVIRNENTETGYSNKLNAAYAIMNSRVSFEELQAPLHEILNSLGIN--PI--- 482
Query: 534 TGYYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEI 586
+R P F+ GR ASI K +G G ++P +L DI P EI
Sbjct: 483 ----YKRDTNPLFIEGRTASIYANNKKIGIIGEINPNILEKIDIEYPIVMSEI 531
>sp|Q5UYF3|SYFB_HALMA Phenylalanine--tRNA ligase beta subunit OS=Haloarcula marismortui
(strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)
GN=pheT PE=3 SV=1
Length = 584
Score = 218 bits (556), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 172/630 (27%), Positives = 285/630 (45%), Gaps = 90/630 (14%)
Query: 1 MPTVSVGRDRLFAALGKSYTKE-EFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDEND 59
MP V V D L G S + E + F G+E + T E+D
Sbjct: 1 MPVVDVDPDELRYLTGHSEKDDDELKSDLFNLGLEFEGWT-----------------EDD 43
Query: 60 EEVIYKIEVPANRYDLLCLEGIAQALRVF---NKQQEIPKYTLSDVSKDSMLQMHVKPET 116
E +++E +R D L +EG+A++LR ++ EIP S D +++ +P+
Sbjct: 44 E---FQLEFAPDRLDRLSVEGVARSLRYHYGDDRGVEIPNTN----SADWTIEVEDQPDE 96
Query: 117 SSIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQG----- 171
RPYV A++R + DEA+ S I LQ+KLH + R+R AIG HDL L+G
Sbjct: 97 ---RPYVTGAIVRGLDMDEAALESLIQLQEKLHATMGRKRAKGAIGVHDLTMLKGDSVTD 153
Query: 172 ----PFTYEALPPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYD 227
TY + P FVPL + T E+M +++ + Y ++ + P +YD
Sbjct: 154 ETGKSITYTSADPDEATFVPLDADAEMTPSEVMASHETG---QTYGDLVADFDRVPAIYD 210
Query: 228 QNRTVLSLPPIINGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFS-EYCKRKYQV 286
+ S PP+ING + +++ ++++FIE T T+ + ++ M I R QV
Sbjct: 211 A-IGLFSFPPVINGRRTEVSVDSRDLFIEMTGTN----QWTIDHMCNIVCYALAARGGQV 265
Query: 287 EPVEVVYAD-------GRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLH 339
E V+V YAD G++ PD S V+ I +GVSL++ EV R L
Sbjct: 266 EKVDVSYADDAPGEYAGKTLERPDFSVRTKTVTHDRIESILGVSLDSREVVDYAERAGLD 325
Query: 340 AERSASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPASVKPLALNEFS 399
A + S ++ +V VPP R DV+HP D+++D+ A G+N++ P +E S
Sbjct: 326 ATETES-DDGVAYDVEVPPYRVDVIHPLDIIDDIGRALGFNSLEPTYPDVSTVGGRHERS 384
Query: 400 ---DLMRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDEST-------------AVVGNP 443
D R + GF ++L + + + E +N T E+ + P
Sbjct: 385 RLEDAARDALVGLGFEDLLNFHMTNEVENFERMNLSTPEAEDGNDADTVGLADPVTIQEP 444
Query: 444 RTSDFEVVRTTLMPGILKTIGHNKDHPKPIKIYEVGDVVLLDEKKDVGASCRRRLAALYC 503
+ D+ ++RT +P I+ + +N P + E+G LD+ ++ G + R +AA
Sbjct: 445 YSEDYTILRTWALPSIMMVLENNTHRSYPQDLAEIGLAAGLDDSENTGVAEHRTVAAALA 504
Query: 504 GANSGFE----LIHCLVDRIMEVIGTPFVPVGDDTGYYIQRSDEPEFLPGRQASITHKGK 559
++ +E + L D + + TP + P F+ GR A + G+
Sbjct: 505 RTDASYEDAKARLQALADAFDKDLETP-------------PTTHPSFIGGRAAEVVLDGE 551
Query: 560 HVGTFGIVHPEVLNNFDISDPCSFMEIDIE 589
VG G +HP+VL D+ P + E ++
Sbjct: 552 SVGVIGEIHPKVLVEHDLELPVAAFEFRLD 581
>sp|Q9HMK3|SYFB_HALSA Phenylalanine--tRNA ligase beta subunit OS=Halobacterium salinarum
(strain ATCC 700922 / JCM 11081 / NRC-1) GN=pheT PE=3
SV=1
Length = 567
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 173/619 (27%), Positives = 264/619 (42%), Gaps = 85/619 (13%)
Query: 1 MPTVSVGRDRLFAALG-KSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDEND 59
MP V + D L G +S +E F GIE + T E+GD
Sbjct: 1 MPVVDIDPDELRRLTGHRSKDDDELRQDLFGLGIEYEGET-------------EDGD--- 44
Query: 60 EEVIYKIEVPANRYDLLCLEGIAQALRVF---NKQQEIPKYTLSDVSKDSMLQMHVKPET 116
+K+E A+R D L +EGIA++LR ++ +IP + + D +
Sbjct: 45 ----FKLEFEADRLDRLSVEGIARSLRYHAGDDRGVDIPDTNAPEWAIDVT-------DV 93
Query: 117 SSIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQG----- 171
+ RPYV AV+R + D + +S I LQ+KLH + R+R AIG HDL L+G
Sbjct: 94 PADRPYVTGAVIRGVDLDADALDSLIQLQEKLHATMGRKRAKGAIGIHDLAMLKGDTVDG 153
Query: 172 ------PFTYEALPPSHINFVPLKQTRDFT-ADELMEFYKSDLKLKKYLHIIENSPLYPV 224
TY + P FVPL + T AD L E + Y ++ + YP
Sbjct: 154 DGTAARSLTYTGIDPDGDTFVPLDDDAERTPADVLTEHPTG----ETYADLLADHDTYPA 209
Query: 225 LYDQNRTVLSLPPIINGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFS-EYCKRK 283
+YD + + S PP+ING + +T ++ +F+E T TD + ++ M I R
Sbjct: 210 IYD-DIGLFSFPPVINGRRTEVTTDSRELFVELTGTD----QWTIDRMCAIICYALDARG 264
Query: 284 YQVEPVEVVYADGRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERS 343
+E V V Y D R PD + VS I +GV E V L R L A +
Sbjct: 265 ATIEDVTVDYPD-RELHRPDFAVRTKHVSHDRIETLLGVEFTTEAVVDLAERAGLDATPT 323
Query: 344 ASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPASVKPLALNEFSDL-- 401
G +V +PP R DV HP DV++D+ AY +N++ R P E S L
Sbjct: 324 DDG-----YDVEIPPYRVDVRHPVDVVDDLGRAYDFNDLTPRYPDVNTIGGRTESSRLER 378
Query: 402 -MRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDEST------AVVGNPRTSDFEVVRTT 454
+R + GF ++L + + S E + D A + P + DF ++RT
Sbjct: 379 SVRQALVGLGFEDLLNFNMTSEAENFDRMRLTPDHDAVGAAQPATIAEPYSQDFTILRTW 438
Query: 455 LMPGILKTIGHNKDHPKPIKIYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFE---- 510
+P + + N H P + EVG D G + RR +AA+ ++ +E
Sbjct: 439 ALPSLAMVLETNTHHAYPQDLAEVGFAAHADGDTQTGVAERRTVAAVLARNDASYEDAKA 498
Query: 511 LIHCLVDRIMEVIGTPFVPVGDDTGYYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPE 570
+ L D + TP + P F+ GR A+I G+ G G +HP
Sbjct: 499 RLQALCDEFAVALETP-------------PTTHPSFIDGRAATIEIDGQPAGVIGELHPG 545
Query: 571 VLNNFDISDPCSFMEIDIE 589
V+ D+ P + E +++
Sbjct: 546 VIVEHDVEVPVAGFEFELD 564
>sp|B0R807|SYFB_HALS3 Phenylalanine--tRNA ligase beta subunit OS=Halobacterium salinarum
(strain ATCC 29341 / DSM 671 / R1) GN=pheT PE=3 SV=1
Length = 567
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 173/619 (27%), Positives = 264/619 (42%), Gaps = 85/619 (13%)
Query: 1 MPTVSVGRDRLFAALG-KSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDEND 59
MP V + D L G +S +E F GIE + T E+GD
Sbjct: 1 MPVVDIDPDELRRLTGHRSKDDDELRQDLFGLGIEYEGET-------------EDGD--- 44
Query: 60 EEVIYKIEVPANRYDLLCLEGIAQALRVF---NKQQEIPKYTLSDVSKDSMLQMHVKPET 116
+K+E A+R D L +EGIA++LR ++ +IP + + D +
Sbjct: 45 ----FKLEFEADRLDRLSVEGIARSLRYHAGDDRGVDIPDTNAPEWAIDVT-------DV 93
Query: 117 SSIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQG----- 171
+ RPYV AV+R + D + +S I LQ+KLH + R+R AIG HDL L+G
Sbjct: 94 PADRPYVTGAVIRGVDLDADALDSLIQLQEKLHATMGRKRAKGAIGIHDLAMLKGDTVDG 153
Query: 172 ------PFTYEALPPSHINFVPLKQTRDFT-ADELMEFYKSDLKLKKYLHIIENSPLYPV 224
TY + P FVPL + T AD L E + Y ++ + YP
Sbjct: 154 DGTAARSLTYTGIDPDGDTFVPLDDDAERTPADVLTEHPTG----ETYADLLADHDTYPA 209
Query: 225 LYDQNRTVLSLPPIINGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFS-EYCKRK 283
+YD + + S PP+ING + +T ++ +F+E T TD + ++ M I R
Sbjct: 210 IYD-DIGLFSFPPVINGRRTEVTTDSRELFVELTGTD----QWTIDRMCAIICYALDARG 264
Query: 284 YQVEPVEVVYADGRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERS 343
+E V V Y D R PD + VS I +GV E V L R L A +
Sbjct: 265 ATIEDVTVDYPD-RELHRPDFAVRTKHVSHDRIETLLGVEFTTEAVVDLAERAGLDATPT 323
Query: 344 ASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPASVKPLALNEFSDL-- 401
G +V +PP R DV HP DV++D+ AY +N++ R P E S L
Sbjct: 324 DDG-----YDVEIPPYRVDVRHPVDVVDDLGRAYDFNDLTPRYPDVNTIGGRTESSRLER 378
Query: 402 -MRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDEST------AVVGNPRTSDFEVVRTT 454
+R + GF ++L + + S E + D A + P + DF ++RT
Sbjct: 379 SVRQALVGLGFEDLLNFNMTSEAENFDRMRLTPDHDAVGAAQPATIAEPYSQDFTILRTW 438
Query: 455 LMPGILKTIGHNKDHPKPIKIYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFE---- 510
+P + + N H P + EVG D G + RR +AA+ ++ +E
Sbjct: 439 ALPSLAMVLETNTHHAYPQDLAEVGFAAHADGDTQTGVAERRTVAAVLARNDASYEDAKA 498
Query: 511 LIHCLVDRIMEVIGTPFVPVGDDTGYYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPE 570
+ L D + TP + P F+ GR A+I G+ G G +HP
Sbjct: 499 RLQALCDEFAVALETP-------------PTTHPSFIDGRAATIEIDGQPAGVIGELHPG 545
Query: 571 VLNNFDISDPCSFMEIDIE 589
V+ D+ P + E +++
Sbjct: 546 VIVEHDVEVPVAGFEFELD 564
>sp|B7J278|SYFB_BORBZ Phenylalanine--tRNA ligase beta subunit OS=Borrelia burgdorferi
(strain ZS7) GN=pheT PE=3 SV=1
Length = 566
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 164/605 (27%), Positives = 280/605 (46%), Gaps = 55/605 (9%)
Query: 1 MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE 60
MP + + ++ +GK++T E +L F E D I+ E ND
Sbjct: 1 MPKLEIYKNLFLDKIGKNFTNLEISELLEPFKAEFDGFDESSGKIKIEF--------ND- 51
Query: 61 EVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDS---MLQMHVKPETS 117
NR DL G+A+ ++ + E+P Y D ++ V + S
Sbjct: 52 ---------TNRPDLWSYLGLARQIKTY-FFGEMPYYDFFSKKGDFKKFYGEILVDGKMS 101
Query: 118 SIRPYVVCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEA 177
IRP++ + + + ++ + I Q+KL QN ++R +A+G ++ + ++ P +Y A
Sbjct: 102 QIRPFIFGFLAKGLIINDKMLETLIQFQEKLCQNYGQKRRRIAMGMYNSNFIKFPISYIA 161
Query: 178 LPPSHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPP 237
P+H FVPL + + E+ E + L+ Y HII+N +P+L D N V+S PP
Sbjct: 162 SSPNH-KFVPLGMDYELSLLEINEKHPKGLE---YSHIIKNFDKFPLLLDDNNNVVSYPP 217
Query: 238 IINGAH-SAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVY--- 293
IIN + ++ + ++F+E T D + L+ ++ +++ PV+ V+
Sbjct: 218 IINSNNIGSLKVGDTDLFVEVTGIDFEATLLALSIAAC---DFYDMGFEILPVKTVFREP 274
Query: 294 --ADGRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWN 351
D + V P +E ++ IN +G +L E + L +M +++ N
Sbjct: 275 FNLDFKELVCPYYFQEEVEFNVENINRLLGSNLTLERICLSLKKMGVNSYSKDFKN---- 330
Query: 352 INVLVPP-TRSDVLHPCDVMEDVAIAYGYNNIPKRKPAS--VKPLA-LNEFSDLMRLEIA 407
+VPP R+D LH DV+EDV I G ++ P + V L+ L EFS +R +
Sbjct: 331 --YIVPPFYRNDFLHEVDVIEDVMIGEGLSSFNPELPKAFAVGRLSPLEEFSRNVRNLMV 388
Query: 408 MNGFTEVLTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIGHNK 467
GF E++ + S K+ +N D++ V NP T ++E +R +++P +LK+ +
Sbjct: 389 GMGFQEMIYNYMGSKKDFIDRMN-INDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSS 447
Query: 468 DHPKPIKIYEVGDVVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPF 527
+ P P KI+E+G V L + G S LA L G F I+ +V + +
Sbjct: 448 NFPYPHKIFEIGKVALRNLDTTEGTSTFTNLAFLMSGKEISFNEINSIVATLFYYLNIEI 507
Query: 528 VPVGDDTGYYIQRSDEPEFLPGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEID 587
+ T +YI GR A I +G ++G FG + P VLNNF I PCS E++
Sbjct: 508 NLIESKTTFYIN---------GRGADIVIEGFNIGGFGEISPYVLNNFGIFIPCSVFEVN 558
Query: 588 IENFL 592
I +
Sbjct: 559 INKLM 563
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 224,828,238
Number of Sequences: 539616
Number of extensions: 9819496
Number of successful extensions: 24599
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 123
Number of HSP's that attempted gapping in prelim test: 23377
Number of HSP's gapped (non-prelim): 615
length of query: 592
length of database: 191,569,459
effective HSP length: 123
effective length of query: 469
effective length of database: 125,196,691
effective search space: 58717248079
effective search space used: 58717248079
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)