BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007716
(592 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54XM6|ETFD_DICDI Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Dictyostelium discoideum GN=etfdh PE=3
SV=1
Length = 606
Score = 586 bits (1510), Expect = e-166, Method: Compositional matrix adjust.
Identities = 290/534 (54%), Positives = 372/534 (69%), Gaps = 23/534 (4%)
Query: 80 FGRNESGVSCAKLFFRSFCSEM---CRESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVD 136
FG+N + R F SE R+S +DVVIVGAGP+GLS AIRLKQL + D
Sbjct: 26 FGKNHQNMKSIYSSIRFFSSEQELPPRDSDQFDVVIVGAGPSGLSTAIRLKQLSEKAGKD 85
Query: 137 LSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFWFLTKDRAFS 196
L VCVVEKG+EVG+HI+SG V +P+ALNEL+P WK++ AP+ V DKF+FLT++R+
Sbjct: 86 LRVCVVEKGSEVGSHILSGAVMDPKALNELIPDWKEKGAPLITEVKQDKFYFLTENRSLR 145
Query: 197 LPSP--FSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDM 254
LP+P N GNY+ISL +VRWLG +AE +GVE+YP FAASE+LY + V GI TNDM
Sbjct: 146 LPTPRLMHNEGNYIISLGNVVRWLGEQAESMGVEVYPSFAASEVLYHDNGAVRGIATNDM 205
Query: 255 GIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKE 314
GIAKDGS NF RG+EL R+T+ AEGCRGSL++ L + F LR++ + QT+ LGIKE
Sbjct: 206 GIAKDGSLTSNFTRGMELNARLTIFAEGCRGSLTKGLFEKFNLRDE--CEPQTFGLGIKE 263
Query: 315 VWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEE 374
WEI KH G ++HTLG+PL + GGSF+YH + + LGLVV L+Y NP+LNPY+E
Sbjct: 264 TWEIKPEKHQQGLVIHTLGYPLSDELLGGSFIYHAENNTVNLGLVVGLDYSNPYLNPYQE 323
Query: 375 FQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKG 434
FQK K HP +K +LEGGT +QYGART+NEGG QSIP VFPGGA++GC AGF++VPK+KG
Sbjct: 324 FQKLKLHPMVKDMLEGGTCIQYGARTINEGGFQSIPKLVFPGGALVGCTAGFVHVPKVKG 383
Query: 435 THTAMKSGMLAAEAGFGVL----------------HEDSNMEIYWDTLQKSWVWQELQRA 478
+H AMK+G+LAAEA F L E + Y + L+KSWVW+EL+
Sbjct: 384 SHYAMKTGILAAEAAFPQLISQQEKEQEQEQDKPSVEPLLINEYPEELKKSWVWKELREV 443
Query: 479 RNYRPAFEYGLLPGLAICGLEHYILRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGV 538
RNYRP+ +G +PGL LE YI RG +P+TL +GKPD+E A IEY KPDG
Sbjct: 444 RNYRPSLHWGTIPGLIYGALEMYIFRGHTPWTLSNGKPDNERLKPAAECKKIEYKKPDGQ 503
Query: 539 LSFDVPTSLHRSNTNHEHDQPAHLRLRDPKIPELVNLPEYAGPESRYCPARVYE 592
++FD+ TS+ RS TNHE +QP HL++RD ++ + VN Y GPE R+CPA VYE
Sbjct: 504 ITFDLMTSVMRSGTNHEENQPIHLKVRDMEVAKKVNRDIYDGPEGRFCPAGVYE 557
>sp|Q6UPE1|ETFD_RAT Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Rattus norvegicus GN=Etfdh PE=2 SV=1
Length = 616
Score = 553 bits (1425), Expect = e-156, Method: Compositional matrix adjust.
Identities = 274/508 (53%), Positives = 353/508 (69%), Gaps = 18/508 (3%)
Query: 101 MCRESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEP 160
M R + DVVIVGAGPAGLSAAIRLKQL E+ D+ VC+VEK A++GAH +SG +P
Sbjct: 61 MERFAEEADVVIVGAGPAGLSAAIRLKQLAAEQEKDIRVCLVEKAAQIGAHTLSGACLDP 120
Query: 161 RALNELLPQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPS----PFSNRGNYVISLSQLVR 216
A EL P WK++ AP+ PV+ D+F LT+ +P P +N GNY++ L LV
Sbjct: 121 AAFKELFPDWKEKGAPLNTPVTEDRFAILTEKHRIPVPILPGLPMNNHGNYIVRLGHLVS 180
Query: 217 WLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRI 276
W+G +AE LGVE+YPG+AA+E+LY D V GI TND+GI KDG+ K F+RG+EL ++
Sbjct: 181 WMGEQAEALGVEVYPGYAAAEVLYHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKV 240
Query: 277 TLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPL 336
T+ AEGC G L+++ K F LR AQ TY +G+KE+W IDE K PG + HT+GWPL
Sbjct: 241 TIFAEGCHGHLAKQFYKKFDLRASCDAQ--TYGIGLKELWVIDEKKWKPGRVDHTVGWPL 298
Query: 337 DQKTYGGSFLYHMNDRQ--IALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVV 394
D+ TYGGSFLYH+N+ + +A+G VV L+Y NP+L+P+ EFQ++KHHP+I+P LEGG +
Sbjct: 299 DRHTYGGSFLYHLNEGEPLVAVGFVVGLDYQNPYLSPFREFQRWKHHPSIRPTLEGGKRI 358
Query: 395 QYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 454
YGAR LNEGGLQSIP FPGG +IGC+ GF+NVPKIKGTHTAMKSG LAAEA F L
Sbjct: 359 AYGARALNEGGLQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGSLAAEAIFKQLT 418
Query: 455 EDS--------NMEIYWDTLQKSWVWQELQRARNYRPAFE--YGLLPGLAICGLEHYILR 504
++ ++ Y D L++SWVW+EL RN RP+ G+ G+ G+ ++ILR
Sbjct: 419 SENLQSKTAGLHVTEYEDNLKQSWVWKELHAVRNIRPSCHGILGVYGGMIYTGIFYWILR 478
Query: 505 GKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTNHEHDQPAHLRL 564
G P+TLKH D E A+ +PIEYPKPDG +SFD+ +S+ S TNHEHDQPAHL L
Sbjct: 479 GMEPWTLKHKGSDSEQLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTL 538
Query: 565 RDPKIPELVNLPEYAGPESRYCPARVYE 592
+D IP NL Y GPE R+CPA VYE
Sbjct: 539 KDDSIPVNRNLSIYDGPEQRFCPAGVYE 566
>sp|Q921G7|ETFD_MOUSE Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Mus musculus GN=Etfdh PE=1 SV=1
Length = 616
Score = 551 bits (1420), Expect = e-156, Method: Compositional matrix adjust.
Identities = 273/508 (53%), Positives = 354/508 (69%), Gaps = 18/508 (3%)
Query: 101 MCRESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEP 160
M R + DVVIVGAGPAGLSAAIRLKQL E+ D+ VC+VEK A++GAH +SG +P
Sbjct: 61 MERFAEEADVVIVGAGPAGLSAAIRLKQLAAEQGKDIRVCLVEKAAQIGAHTLSGACLDP 120
Query: 161 RALNELLPQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPS----PFSNRGNYVISLSQLVR 216
A EL P WK++ AP+ PV+ D+F LT+ +P P +N GNY++ L LV
Sbjct: 121 AAFKELFPDWKEKGAPLNTPVTEDRFAILTEKHRIPVPILPGLPMNNHGNYIVRLGHLVS 180
Query: 217 WLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRI 276
W+G +AE LGVE+YPG+AA+E+LY D V GI TND+GI KDG+ K F+RG+EL ++
Sbjct: 181 WMGEQAEALGVEVYPGYAAAEVLYHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKV 240
Query: 277 TLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPL 336
T+ AEGC G L+++L K F LR AQ TY +G+KE+W IDE K PG + HT+GWPL
Sbjct: 241 TVFAEGCHGHLAKQLYKKFDLRASCDAQ--TYGIGLKELWIIDEKKWKPGRVDHTVGWPL 298
Query: 337 DQKTYGGSFLYHMNDRQ--IALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVV 394
D+ TYGGSFLYH+N+ + +A+G VV L+Y NP+L+P+ EFQ++KHHP+I+P LEGG +
Sbjct: 299 DRHTYGGSFLYHLNEGEPLVAVGFVVGLDYQNPYLSPFREFQRWKHHPSIQPTLEGGKRI 358
Query: 395 QYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 454
YGAR LNEGGLQSIP FPGG +IGC+ GF+NVPKIKGTHTAMKSG LAAE+ F L
Sbjct: 359 AYGARALNEGGLQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGSLAAESIFKQLT 418
Query: 455 EDS--------NMEIYWDTLQKSWVWQELQRARNYRPAFE--YGLLPGLAICGLEHYILR 504
++ ++ Y D L++SWVW+EL RN RP+ G+ G+ G+ ++ILR
Sbjct: 419 SENLQSKTTGLHVTEYEDNLKQSWVWKELHAVRNIRPSCHGILGVYGGMIYTGIFYWILR 478
Query: 505 GKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTNHEHDQPAHLRL 564
G P+TLKH D + A+ +PIEYPKPDG +SFD+ +S+ S TNHEHDQPAHL L
Sbjct: 479 GMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTL 538
Query: 565 RDPKIPELVNLPEYAGPESRYCPARVYE 592
+D IP NL Y GPE R+CPA VYE
Sbjct: 539 KDDSIPVNRNLSIYDGPEQRFCPAGVYE 566
>sp|Q2KIG0|ETFD_BOVIN Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Bos taurus GN=ETFDH PE=2 SV=1
Length = 617
Score = 548 bits (1412), Expect = e-155, Method: Compositional matrix adjust.
Identities = 269/508 (52%), Positives = 355/508 (69%), Gaps = 18/508 (3%)
Query: 101 MCRESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEP 160
M R + DVVIVGAGPAGLSAA RLKQL + D+ VC+VEK A++GAH +SG +P
Sbjct: 62 MERFAEEADVVIVGAGPAGLSAAARLKQLAAQHEKDIRVCLVEKAAQIGAHTLSGACLDP 121
Query: 161 RALNELLPQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPS----PFSNRGNYVISLSQLVR 216
RAL EL P WK++ AP+ PV+ D+F LT+ +P P +N GNY++ L LV
Sbjct: 122 RALQELFPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYIVRLGHLVS 181
Query: 217 WLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRI 276
W+G +AE LGVE+YPG+AA+E+L+ D V GI TND+GI KDG+ K F+RG+EL ++
Sbjct: 182 WMGEQAEALGVEVYPGYAAAEVLFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKV 241
Query: 277 TLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPL 336
T+ AEGC G L+++L + F LR ++ + QTY +G+KE+W IDE K PG + HT+GWPL
Sbjct: 242 TIFAEGCHGHLAKQLYRKFDLR--ANCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPL 299
Query: 337 DQKTYGGSFLYHMNDRQ--IALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVV 394
D+ TYGGSFLYH+N+ + +ALG VV L+Y NP+L+P+ EFQ++KHHP+I+P LEGG +
Sbjct: 300 DRHTYGGSFLYHLNEGEPLVALGFVVGLDYQNPYLSPFREFQRWKHHPSIQPTLEGGKRI 359
Query: 395 QYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 454
YGAR LNEGGLQ IP FPGG +IGC+ GF+NVPKIKGTHTAMKSG+LAAE+ F L
Sbjct: 360 AYGARALNEGGLQCIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGILAAESIFNQLT 419
Query: 455 EDS--------NMEIYWDTLQKSWVWQELQRARNYRPAFE--YGLLPGLAICGLEHYILR 504
++ ++ Y D L+KSWVW+EL RN RP+ G+ G+ G+ ++I R
Sbjct: 420 NENLQSKTIGLDVTEYEDNLKKSWVWKELYAVRNIRPSCHSILGVYGGMIYTGIFYWIFR 479
Query: 505 GKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTNHEHDQPAHLRL 564
G P+TLKH D + A+ +PIEYPKPDG +SFD+ +S+ S TNHEHDQPAHL L
Sbjct: 480 GMEPWTLKHKGSDSDKLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTL 539
Query: 565 RDPKIPELVNLPEYAGPESRYCPARVYE 592
+D +P NL Y GPE R+CPA VYE
Sbjct: 540 KDDSVPVNRNLSIYDGPEQRFCPAGVYE 567
>sp|P55931|ETFD_PIG Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Sus scrofa GN=ETFDH PE=1 SV=2
Length = 617
Score = 547 bits (1409), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/508 (53%), Positives = 351/508 (69%), Gaps = 18/508 (3%)
Query: 101 MCRESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEP 160
M R + DVVIVGAGPAGLSAA RLKQL + DL VC+VEK A +GAH +SG +P
Sbjct: 62 MERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDP 121
Query: 161 RALNELLPQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPS----PFSNRGNYVISLSQLVR 216
RA EL P WK++ AP+ PV+ D+F LT+ +P P +N GNYV+ L LV
Sbjct: 122 RAFEELFPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVS 181
Query: 217 WLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRI 276
W+G +AE LGVE+YPG+AA+EIL+ D V GI TND+GI KDG+ K F+RG+EL ++
Sbjct: 182 WMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKV 241
Query: 277 TLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPL 336
T+ AEGC G L+++L K F LR ++ + QTY +G+KE+W IDE K PG + HT+GWPL
Sbjct: 242 TIFAEGCHGHLAKQLYKKFDLR--ANCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPL 299
Query: 337 DQKTYGGSFLYHMNDRQ--IALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVV 394
D+ TYGGSFLYH+N+ + +ALG VV L+Y NP+L+P+ EFQ++KHHP+IKP LEGG +
Sbjct: 300 DRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLSPFREFQRWKHHPSIKPTLEGGKRI 359
Query: 395 QYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 454
YGAR LNEGG QSIP FPGG +IGC+ GF+NVPKIKGTHTAMKSG LAAE+ F L
Sbjct: 360 AYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLT 419
Query: 455 EDS--------NMEIYWDTLQKSWVWQELQRARNYRPAFE--YGLLPGLAICGLEHYILR 504
++ ++ Y D L+ SWVW+EL RN RP+ G+ G+ G+ ++I R
Sbjct: 420 SENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSCHGILGVYGGMIYTGIFYWIFR 479
Query: 505 GKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTNHEHDQPAHLRL 564
G P+TLKH D + A+ +PIEYPKPDG +SFD+ +S+ S TNHEHDQPAHL L
Sbjct: 480 GMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTL 539
Query: 565 RDPKIPELVNLPEYAGPESRYCPARVYE 592
+D +P NL Y GPE R+CPA VYE
Sbjct: 540 KDDSVPVNRNLSIYDGPEQRFCPAGVYE 567
>sp|Q5RDD3|ETFD_PONAB Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Pongo abelii GN=ETFDH PE=2 SV=1
Length = 617
Score = 547 bits (1409), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/508 (53%), Positives = 353/508 (69%), Gaps = 18/508 (3%)
Query: 101 MCRESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEP 160
M R + DVVIVGAGPAGLSAA+RLKQL D+ VC+VEK A++GAH +SG +P
Sbjct: 62 MERFAEGADVVIVGAGPAGLSAAVRLKQLAAAHEKDIRVCLVEKAAQIGAHTLSGACLDP 121
Query: 161 RALNELLPQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPS----PFSNRGNYVISLSQLVR 216
A EL P WK++ AP+ PV+ D+F LT+ +P P +N GNY++ L LV
Sbjct: 122 GAFKELFPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYIVRLGHLVS 181
Query: 217 WLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRI 276
W+G +AE LGVE+YPG+AA+E+L+ D V GI TND+GI KDG+ K F+RG+EL ++
Sbjct: 182 WMGEQAEALGVEVYPGYAAAEVLFHDDGSVKGIATNDVGIQKDGAPKATFERGLELHAKV 241
Query: 277 TLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPL 336
T+ AEGC G L+++L K F LR ++ + QTY +G+KE+W IDE PG + HT+GWPL
Sbjct: 242 TIFAEGCHGHLAKQLYKKFDLR--ANCEPQTYGIGLKELWVIDEKNWKPGRVDHTVGWPL 299
Query: 337 DQKTYGGSFLYHMNDRQ--IALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVV 394
D+ TYGGSFLYH+N+ + +ALGLVV L+Y NP+L+P+ EFQ++KHHP+I+P LEGG +
Sbjct: 300 DRHTYGGSFLYHLNEGEPLVALGLVVGLDYQNPYLSPFREFQRWKHHPSIRPTLEGGKRI 359
Query: 395 QYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 454
YGAR LNEGG QSIP FPGG +IGC+ GF+NVPKIKGTHTAMKSG+LAAE+ F L
Sbjct: 360 AYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGILAAESIFNQLT 419
Query: 455 EDS--------NMEIYWDTLQKSWVWQELQRARNYRPAFE--YGLLPGLAICGLEHYILR 504
++ ++ Y D L+ SWVW+EL RN RP+ G+ G+ G+ ++ILR
Sbjct: 420 SENLQSKTMGLHVTEYEDNLKNSWVWKELYSVRNIRPSCHGVLGVYGGMIYTGIFYWILR 479
Query: 505 GKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTNHEHDQPAHLRL 564
G P+TLKH D E A+ +PIEYPKPDG +SFD+ +S+ S TNHEHDQPAHL L
Sbjct: 480 GMEPWTLKHKGSDFERLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTL 539
Query: 565 RDPKIPELVNLPEYAGPESRYCPARVYE 592
RD IP NL Y GPE R+CPA VYE
Sbjct: 540 RDDSIPVNRNLSIYDGPEQRFCPAGVYE 567
>sp|Q16134|ETFD_HUMAN Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Homo sapiens GN=ETFDH PE=1 SV=2
Length = 617
Score = 546 bits (1407), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/508 (53%), Positives = 353/508 (69%), Gaps = 18/508 (3%)
Query: 101 MCRESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEP 160
M R + DVVIVGAGPAGLSAA+RLKQL D+ VC+VEK A++GAH +SG +P
Sbjct: 62 MERFAEEADVVIVGAGPAGLSAAVRLKQLAVAHEKDIRVCLVEKAAQIGAHTLSGACLDP 121
Query: 161 RALNELLPQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPS----PFSNRGNYVISLSQLVR 216
A EL P WK++ AP+ PV+ D+F LT+ +P P +N GNY++ L LV
Sbjct: 122 GAFKELFPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYIVRLGHLVS 181
Query: 217 WLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRI 276
W+G +AE LGVE+YPG+AA+E+L+ D V GI TND+GI KDG+ K F+RG+EL ++
Sbjct: 182 WMGEQAEALGVEVYPGYAAAEVLFHDDGSVKGIATNDVGIQKDGAPKATFERGLELHAKV 241
Query: 277 TLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPL 336
T+ AEGC G L+++L K F LR ++ + QTY +G+KE+W IDE PG + HT+GWPL
Sbjct: 242 TIFAEGCHGHLAKQLYKKFDLR--ANCEPQTYGIGLKELWVIDEKNWKPGRVDHTVGWPL 299
Query: 337 DQKTYGGSFLYHMNDRQ--IALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVV 394
D+ TYGGSFLYH+N+ + +ALGLVV L+Y NP+L+P+ EFQ++KHHP+I+P LEGG +
Sbjct: 300 DRHTYGGSFLYHLNEGEPLVALGLVVGLDYQNPYLSPFREFQRWKHHPSIRPTLEGGKRI 359
Query: 395 QYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 454
YGAR LNEGG QSIP FPGG +IGC+ GF+NVPKIKGTHTAMKSG+LAAE+ F L
Sbjct: 360 AYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGILAAESIFNQLT 419
Query: 455 EDS--------NMEIYWDTLQKSWVWQELQRARNYRPAFE--YGLLPGLAICGLEHYILR 504
++ ++ Y D L+ SWVW+EL RN RP+ G+ G+ G+ ++ILR
Sbjct: 420 SENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSCHGVLGVYGGMIYTGIFYWILR 479
Query: 505 GKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTNHEHDQPAHLRL 564
G P+TLKH D E A+ +PIEYPKPDG +SFD+ +S+ S TNHEHDQPAHL L
Sbjct: 480 GMEPWTLKHKGSDFERLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTL 539
Query: 565 RDPKIPELVNLPEYAGPESRYCPARVYE 592
RD IP NL Y GPE R+CPA VYE
Sbjct: 540 RDDSIPVNRNLSIYDGPEQRFCPAGVYE 567
>sp|Q9HZP5|ETFD_PSEAE Electron transfer flavoprotein-ubiquinone oxidoreductase
OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C
/ PRS 101 / LMG 12228) GN=PA2953 PE=1 SV=1
Length = 551
Score = 507 bits (1306), Expect = e-143, Method: Compositional matrix adjust.
Identities = 266/504 (52%), Positives = 335/504 (66%), Gaps = 14/504 (2%)
Query: 101 MCRESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEP 160
M RE M +DVVIVGAGPAGLSAA RLKQ E ++SVCVVEKG+EVGAHI+SG VFEP
Sbjct: 1 MEREYMEFDVVIVGAGPAGLSAACRLKQKAAEAGQEISVCVVEKGSEVGAHILSGAVFEP 60
Query: 161 RALNELLPQWKQEEAPIRVPVSSDKFWFL------TKDRAFSLPSPFSNRGNYVISLSQL 214
RALNEL P WK+ AP+ PV+ D + L TK F +P N GNY+ISL L
Sbjct: 61 RALNELFPDWKELGAPLNTPVTGDDIYVLKSAESATKVPNFFVPKTMHNEGNYIISLGNL 120
Query: 215 VRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQR-GVELR 273
RWL +AE LGVEIYPGFAA E L D + V GI T D+G+ ++G+ KE + G+ELR
Sbjct: 121 CRWLAQQAEGLGVEIYPGFAAQEALIDENGVVRGIVTGDLGVDREGNPKEGYYTPGMELR 180
Query: 274 GRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLG 333
+ TL AEGCRG + ++LIK + L ++ AQH Y +GIKE+W+ID KH PG ++HT G
Sbjct: 181 AKYTLFAEGCRGHIGKQLIKKYNLDSEADAQH--YGIGIKEIWDIDPSKHKPGLVVHTAG 238
Query: 334 WPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTV 393
WPL+ + GGSFLYH+ + Q+ +GL++ L+Y NP L+P++EFQ++KHHP +K LEGG
Sbjct: 239 WPLNDENTGGSFLYHLENNQVFVGLIIDLSYSNPHLSPFDEFQRYKHHPVVKQYLEGGKR 298
Query: 394 VQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVL 453
V YGAR + +GGL S+P VFPGGA+IGC G LN KIKG+HTAMKSGMLAA+A L
Sbjct: 299 VAYGARAICKGGLNSLPKMVFPGGALIGCDLGTLNFAKIKGSHTAMKSGMLAADAIAEAL 358
Query: 454 HE----DSNMEIYWDTLQKSWVWQELQRARNYRPAF-EYGLLPGLAICGLEHYILRGKSP 508
+ Y D + SW++ EL R+RN+ A ++G + G A ++ I GK P
Sbjct: 359 AAGREGGDELSSYVDAFKASWLYDELFRSRNFGAAIHKFGAIGGGAFNFIDQNIFGGKIP 418
Query: 509 YTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTNHEHDQPAHLRLRDPK 568
TL KPD+ A I+YPKPDG LSFD +S+ SNTNHE DQP HL+L D
Sbjct: 419 VTLHDDKPDYACLKKASEAPKIDYPKPDGKLSFDKLSSVFLSNTNHEEDQPIHLKLADAS 478
Query: 569 IPELVNLPEYAGPESRYCPARVYE 592
IP NLP Y P RYCPA VYE
Sbjct: 479 IPIEKNLPLYDEPAQRYCPAGVYE 502
>sp|Q11190|ETFD_CAEEL Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Caenorhabditis elegans GN=let-721 PE=1
SV=2
Length = 597
Score = 506 bits (1304), Expect = e-142, Method: Compositional matrix adjust.
Identities = 254/508 (50%), Positives = 343/508 (67%), Gaps = 19/508 (3%)
Query: 100 EMCRESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFE 159
++ RES YDVVIVG GP+GLSAAIRL+QL + +L VCVVEK + +G H +SG V E
Sbjct: 43 DLARESDVYDVVIVGGGPSGLSAAIRLRQLAEKAQKELRVCVVEKASVIGGHTLSGAVIE 102
Query: 160 PRALNELLPQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPS----PFSNRGNYVISLSQLV 215
RAL+EL+P WK+ AP+ V+S+ LT+ +P P +N GNY++ L ++V
Sbjct: 103 TRALDELIPNWKELGAPVYQQVTSESIAILTESGRIPVPVLPGVPLANHGNYIVRLGKVV 162
Query: 216 RWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGR 275
+WLG +AE GVE++P AASE+LY+ D V GI T+D+GI KDG+ K+ F RG+E +
Sbjct: 163 QWLGEQAEAAGVEVWPEIAASEVLYNEDGSVKGIATSDVGIGKDGAPKDGFARGMEFHAK 222
Query: 276 ITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWP 335
T+ AEGCRG LS++++ F LR +HA TY +G+KE+WEID KH PG + HT+GWP
Sbjct: 223 CTIFAEGCRGHLSKQVLDKFDLR--THAM--TYGIGLKELWEIDPAKHRPGYVEHTMGWP 278
Query: 336 LDQKTYGGSFLYHMNDRQ---IALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGT 392
L+ YGGSFLYH+ D+ +++G VVAL+Y NP LNPY+EFQK+K HP+I LEGG
Sbjct: 279 LNVDQYGGSFLYHIEDQGQPLVSVGFVVALDYANPNLNPYKEFQKYKTHPSISKQLEGGK 338
Query: 393 VVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGV 452
+ YGAR LNEGG QSIP FPGG ++GC+AGFLNV K+KGTH AMKSGM+AAE+ F
Sbjct: 339 RIGYGARALNEGGFQSIPKLHFPGGCLVGCSAGFLNVAKLKGTHNAMKSGMVAAESIFED 398
Query: 453 LHEDS------NMEIYWDTLQKSWVWQELQRARNYRPAF--EYGLLPGLAICGLEHYILR 504
+ + + Y ++ ++V +EL+ RN RP+F G + GL G+ + R
Sbjct: 399 IQQKGEDVQTIDPATYDKNIRDTYVVKELKATRNIRPSFNTSLGYIGGLIYSGIFYVFGR 458
Query: 505 GKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTNHEHDQPAHLRL 564
G P+TL HGK D+E + I+YPKPDG L+FD+ TS+ + TNH DQPAHL L
Sbjct: 459 GIEPWTLGHGKKDNEKLIPVKDAKEIDYPKPDGKLTFDLLTSVSLTGTNHTEDQPAHLTL 518
Query: 565 RDPKIPELVNLPEYAGPESRYCPARVYE 592
++ ++P VNL Y GPE+R+CPA VYE
Sbjct: 519 KNDQVPLDVNLAVYGGPEARFCPAGVYE 546
>sp|P94132|ETFD_ACIAD Probable electron transfer flavoprotein-ubiquinone oxidoreductase
OS=Acinetobacter sp. (strain ADP1) GN=etfD PE=4 SV=1
Length = 570
Score = 496 bits (1277), Expect = e-139, Method: Compositional matrix adjust.
Identities = 267/521 (51%), Positives = 332/521 (63%), Gaps = 36/521 (6%)
Query: 103 RESMAYDVVIVGAGPAGLSAAIRLKQLCREKNV-DLSVCVVEKGAEVGAHIISGNVFEPR 161
RE+M +DVVIVGAGPAGLSAAI+++QL E N+ DLSVCVVEKG+EVGAHI+SG V EPR
Sbjct: 6 REAMEFDVVIVGAGPAGLSAAIKIRQLAIENNLPDLSVCVVEKGSEVGAHILSGAVLEPR 65
Query: 162 ALNELLPQWKQEEAPIRVPVSSDKFWFLTKDRA------FSLPSPFSNRGNYVISLSQLV 215
A+NEL P WK+E AP+ VPV+ DK +FL D + +P N GNYVISL +V
Sbjct: 66 AINELFPNWKEEGAPLNVPVTEDKTYFLMSDEKSQEAPHWMVPKTMHNDGNYVISLGNVV 125
Query: 216 RWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGR 275
RWLG KAEEL V I+PGFAA+EILY AD V GI T DMGI KDG NF G EL +
Sbjct: 126 RWLGQKAEELEVSIFPGFAAAEILYHADGTVKGIQTGDMGIGKDGEPTHNFAPGYELHAK 185
Query: 276 ITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWP 335
TL AEGCRG L ++LI F L + + QH Y +GIKE+WEID KH PG ++H GWP
Sbjct: 186 YTLFAEGCRGHLGKRLINKFNLDQDADPQH--YGIGIKELWEIDPAKHKPGLVMHGSGWP 243
Query: 336 LDQK-TYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVV 394
L + + GG +LYH + Q+ LG++V L+Y NP + P+ E Q++K HP IK LEGG +
Sbjct: 244 LSETGSSGGWWLYHAENNQVTLGMIVDLSYENPHMFPFMEMQRWKTHPLIKQYLEGGKRI 303
Query: 395 QYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 454
YGAR + +GGL S+P FPGG +IG AGFLN KIKG+HTAMKSGML EA F +
Sbjct: 304 SYGARAVVKGGLNSLPKLTFPGGCLIGDDAGFLNFAKIKGSHTAMKSGMLCGEAVFEAIA 363
Query: 455 E--------------------DSNMEIYWDTLQKSWVWQELQRARNYRPAF-EYGLLPGL 493
D + Y KSW+ +EL R+RN+ PA ++GL G
Sbjct: 364 RGVDKGGDLAIARVVEGEDLFDKELTTYTQKFDKSWLKEELHRSRNFGPAMHKFGLWIGG 423
Query: 494 AICGLEHYILRGKSPYTLKHGKPDHEA--TDAARLHSPIEYPKPDGVLSFDVPTSLHRSN 551
A ++ I K P+TL +PD+ A T P YPKPDG L+FD +S+ SN
Sbjct: 424 AFNFVDQNIF--KVPFTLHDLQPDYSALKTQDQATFKP-NYPKPDGKLTFDRLSSVFVSN 480
Query: 552 TNHEHDQPAHLRLRDPKIPELVNLPEYAGPESRYCPARVYE 592
T HE +QP+HL+L D IP VNLP + P RYCPA VYE
Sbjct: 481 TVHEENQPSHLKLTDASIPVAVNLPRWDEPAQRYCPAGVYE 521
>sp|P87111|ETFD_SCHPO Probable electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPAC20G8.04c PE=3 SV=1
Length = 632
Score = 484 bits (1245), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/499 (49%), Positives = 322/499 (64%), Gaps = 12/499 (2%)
Query: 103 RESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRA 162
RE DV IVGAGPAGLSAAIR+KQ + N D+ V V+EK AE G H +SG V +P A
Sbjct: 86 REVEDVDVCIVGAGPAGLSAAIRIKQQAAKANRDIRVVVLEKAAEPGNHSVSGAVIQPTA 145
Query: 163 LNELLPQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPSP--FSNRGNYVISLSQLVRWLGG 220
L+ELLP W+ + V+ DK FL F +P P N GNYV+SL++ RWL
Sbjct: 146 LDELLPNWRDDPPENCTAVTHDKMKFLIPKLHFPIPVPPAMKNHGNYVMSLAEFTRWLAA 205
Query: 221 KAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLA 280
KAEE GVEIYP FAASE+LY+ D VIG+ TND G+ G K+NF+RG+ +TL A
Sbjct: 206 KAEEYGVEIYPSFAASEVLYNKDGSVIGVATNDFGVDSKGLPKDNFERGMAFHAPVTLFA 265
Query: 281 EGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKT 340
EG GSLS+ +IK F LR + + QTY LG+KEVW + + GE+ HTLGWP+ T
Sbjct: 266 EGAHGSLSKSIIKRFNLR--GNCEPQTYGLGVKEVWRVPDENFRKGEVAHTLGWPMRNDT 323
Query: 341 YGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGART 400
YGG F+Y D + +GLVV L+Y NP+++P EFQ+ K +P +L+GG ++Y AR
Sbjct: 324 YGGGFMYQFGDNYVTVGLVVGLDYPNPYVSPALEFQRMKQNPFFAKVLKGGKCLEYAARA 383
Query: 401 LNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSN-- 458
LNEGG Q+IP VFPGGA+IGC+AGF+NV KIKGTHTAMKSG++AA+A D+
Sbjct: 384 LNEGGYQAIPKLVFPGGALIGCSAGFVNVAKIKGTHTAMKSGIVAADAIVDAFGRDAASK 443
Query: 459 ---MEIYWDTLQKSWVWQELQRARNYRPAFE--YGLLPGLAICGLEHYILRGKSPYTLKH 513
+ Y + L+ ++V++EL RN RP+F G G+A +E Y+L+G+ P+TLKH
Sbjct: 444 PLLLNDYEENLKNTYVFKELYSVRNIRPSFHSFLGNYGGMAYSAVEAYVLKGRVPWTLKH 503
Query: 514 GKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTNHEHDQPAHLRLRDPKIPELV 573
D +AT +A + PI YPKPD VLSFD+PTS+ RS T H +QP HL PK +
Sbjct: 504 KGGDAKATKSASKYKPINYPKPDNVLSFDIPTSVSRSATMHAENQPCHLFDHRPKDRKSC 563
Query: 574 NLPEYAGPESRYCPARVYE 592
Y G E+++CPA VYE
Sbjct: 564 -FETYKGVENKFCPAGVYE 581
>sp|Q08822|ETFD_YEAST Probable electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CIR2 PE=1 SV=1
Length = 631
Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust.
Identities = 242/522 (46%), Positives = 324/522 (62%), Gaps = 43/522 (8%)
Query: 109 DVVIVGAGPAGLSAAIRLKQLCREKNV-DLSVCVVEKGAEVGAHIISGNVFEPRALNELL 167
DV IVG GPAGL+ AI+LKQL L V V+EK + +G +SG + EP EL
Sbjct: 64 DVCIVGGGPAGLATAIKLKQLDNSSGTGQLRVVVLEKSSVLGGQTVSGAILEPGVWKELF 123
Query: 168 PQWKQEEAPIRVP--------VSSDKFWFLTKDRAFSLPSP--FSNRG-NYVISLSQLVR 216
P E++ I +P V+ + FL A S+P P N+G NY++SL+Q+V
Sbjct: 124 PD---EKSDIGIPLPKELATLVTKEHLKFLKGKWAISVPEPSQMINKGRNYIVSLNQVVG 180
Query: 217 WLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRI 276
+LG KAEE+GVE+YPG A S+++YD +N V G+ T D GI+K G KE F+RG+E R
Sbjct: 181 YLGEKAEEVGVEVYPGIAVSDLIYDENNAVKGVITKDAGISKSGKPKETFERGMEFWARQ 240
Query: 277 TLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPL 336
T+LAEGC GSL+++ + + LR+ QHQTY LGIKEVWE+ N G HT+G+PL
Sbjct: 241 TVLAEGCHGSLTKQALAKYDLRKGR--QHQTYGLGIKEVWEVKPENFNKGFAAHTMGYPL 298
Query: 337 DQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQY 396
YGG F YH D + +GLVV L+Y NP+++PY+EFQK KHHP +LEGG + Y
Sbjct: 299 TNDVYGGGFQYHFGDGLVTVGLVVGLDYKNPYVSPYKEFQKMKHHPYYSKVLEGGKCIAY 358
Query: 397 GARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEA------GF 450
AR LNEGGLQS+P FPGG ++G +AGF+NVPKIKGTHTAMKSG+LAAE+ G
Sbjct: 359 AARALNEGGLQSVPKLNFPGGVLVGASAGFMNVPKIKGTHTAMKSGLLAAESIFESIKGL 418
Query: 451 GVLHE---------------DSNMEIYWDTLQKSWVWQELQRARNYRPAF--EYGLLPGL 493
VL E N+E Y ++S +++EL RN RP+F + G G+
Sbjct: 419 PVLEEVEDEDAKMAMFDKEATINLESYESAFKESSIYKELYEVRNIRPSFSGKLGGYGGM 478
Query: 494 AICGLEHYILRGKSPYTLKHG-KPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNT 552
G++ IL+GK P+TLK K D E + A + PIEYPKPDGV+SFD+ TS+ R+ T
Sbjct: 479 IYSGIDSLILKGKVPWTLKFDEKNDGEILEPASKYKPIEYPKPDGVISFDILTSVSRTGT 538
Query: 553 NHEHDQPAHLRLRDPKIPELV--NLPEYAGPESRYCPARVYE 592
H+ D+P HLR+ + + + P + G ESR+CPA VYE
Sbjct: 539 YHDDDEPCHLRVPGQDMVKYAERSFPVWKGVESRFCPAGVYE 580
>sp|P26484|FIXC_AZOC5 Protein FixC OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM
5975 / ORS 571) GN=fixC PE=3 SV=2
Length = 435
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 189/397 (47%), Gaps = 58/397 (14%)
Query: 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELL 167
+D ++VGAG AG +A + L + L V +E+G G+ + G + L +L+
Sbjct: 6 FDAIVVGAGMAGNAATLTLARR------GLKVLQLERGEYSGSKNVQGAILYADMLEKLV 59
Query: 168 PQWKQEEAPIRVPVSSDKFWFLTKDRA----------FSLPSPFSNRGNYVISLSQLVRW 217
P ++ E+AP+ + +FW L DR+ F+ P NR Y I +Q +W
Sbjct: 60 PDFR-EDAPLERHLVEQRFWML-DDRSHVGLHYRSEDFNEEKP--NR--YTIIRAQFDKW 113
Query: 218 LGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRIT 277
K +E G + +E++ DA KVIG+ T+ + G ++ +
Sbjct: 114 FSSKVKEAGATVLCETTVTELVQDAYGKVIGVKTD--------------RSGGQIHADVV 159
Query: 278 LLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEV----WEIDEGKHN----PGEIL 329
+LAEG G L K LRE+ +H AL +KE+ E E + N G ++
Sbjct: 160 VLAEGVNGLLGTKA----HLRERPKPEH--VALAVKEMHFLPRETIEARFNLQGDEGVVI 213
Query: 330 HTLGWPLDQKTYGGSFLYHMNDRQIALGL-VVALNYHNPFLNPYEEFQKFKHHPAIKPLL 388
G + + G F+Y N I+LG+ + ++ PY ++FK HP++ PL+
Sbjct: 214 EAAG-TISRGMTGMGFIY-ANKECISLGIGCLVSDFQKTGETPYGLLERFKSHPSVAPLI 271
Query: 389 EGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEA 448
EG V +Y A + EGG ++IP G ++G AA N +G++ AM SG +AAEA
Sbjct: 272 EGSEVKEYAAHLIPEGGFKAIPQLFGDGWVVVGDAAQLNNAVHREGSNLAMTSGRIAAEA 331
Query: 449 GFGVLHED-----SNMEIYWDTLQKSWVWQELQRARN 480
F V N+ +Y L++S+V +++++ ++
Sbjct: 332 IFQVKSRREPMSAKNLSLYKTMLEESFVLKDMKKYKD 368
>sp|Q8Z9K9|FIXC_SALTI Protein FixC OS=Salmonella typhi GN=fixC PE=3 SV=1
Length = 428
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 172/366 (46%), Gaps = 48/366 (13%)
Query: 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELL 167
+D +IVGAG AG AA+ L RE V V+E+G GA ++G +L ++
Sbjct: 6 FDAIIVGAGLAGSVAAL---VLAREGA---QVLVIERGNSAGAKNVTGGRLYAHSLERII 59
Query: 168 PQWKQEEAPIRVPVSSDKFWFLTKDRAFSLP-----SPFSNRGNYVISLSQLVRWLGGKA 222
P + ++API ++ +K F+T + A ++ +++ +Y + S+ WL +A
Sbjct: 60 PGFA-DQAPIERMITHEKLAFMTDNGAMTIDYCNGEDASASQVSYSVLRSKFDAWLMEQA 118
Query: 223 EELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEG 282
EE G ++ G ++ D KV+G+ + G L ++ +LA+G
Sbjct: 119 EEAGAQLITGIRVDNVV-QRDGKVVGVEAD----------------GDILEAKVVILADG 161
Query: 283 CRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEG--------KHNPGEILHTLGW 334
L+EKL + ++ A H A+G+KE+ E+ + + N G G
Sbjct: 162 VNSLLAEKL----GMAKRVEASH--VAVGVKELIELPKSVIEDRFQLQGNEGAACLFAGA 215
Query: 335 PLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPY-EEFQKFKHHPAIKPLLEGGTV 393
P D GG FLY N+ ++LGLV L++ + + FK HPA+ PL+ GG +
Sbjct: 216 PTD-GLMGGGFLYT-NETTLSLGLVCGLHHLKDAKKSVPQMLEDFKQHPAVAPLIAGGKL 273
Query: 394 VQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGF-LNVP-KIKGTHTAMKSGMLAAEAGFG 451
V+Y A + E G+ P V G I G AAG +N+ I+G A+ +G AA+
Sbjct: 274 VEYAAHVVPEAGMNMQPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAISAGEAAAKTVLS 333
Query: 452 VLHEDS 457
+ D
Sbjct: 334 AMKRDD 339
>sp|Q8ZRW9|FIXC_SALTY Protein FixC OS=Salmonella typhimurium (strain LT2 / SGSC1412 /
ATCC 700720) GN=fixC PE=3 SV=1
Length = 428
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 172/366 (46%), Gaps = 48/366 (13%)
Query: 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELL 167
+D +IVGAG AG AA+ L RE V V+E+G GA ++G +L ++
Sbjct: 6 FDAIIVGAGLAGSVAAL---VLAREGA---QVLVIERGNSAGAKNVTGGRLYAHSLERII 59
Query: 168 PQWKQEEAPIRVPVSSDKFWFLTKDRAFSLP-----SPFSNRGNYVISLSQLVRWLGGKA 222
P + ++API ++ +K F+T + A ++ +++ +Y + S+ WL +A
Sbjct: 60 PGFA-DQAPIERMITHEKLAFMTDNGAMTIDYCNGEDASASQVSYSVLRSKFDAWLMEQA 118
Query: 223 EELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEG 282
EE G ++ G ++ D KV+G+ + G L ++ +LA+G
Sbjct: 119 EEAGAQLITGIRVDNVV-QRDGKVVGVEAD----------------GDILEAKVVILADG 161
Query: 283 CRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEID--------EGKHNPGEILHTLGW 334
L+EKL + ++ A H A+G+KE+ E+ + + N G G
Sbjct: 162 VNSLLAEKL----GMTKRVEASH--VAVGVKELIELPKLVIEDRFQLQGNEGAACLFAGA 215
Query: 335 PLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPY-EEFQKFKHHPAIKPLLEGGTV 393
P D GG FLY N+ ++LGLV L++ + + FK HPA+ PL+ GG +
Sbjct: 216 PTD-GLMGGGFLYT-NETTLSLGLVCGLHHLKDAKKSVPQMLEDFKQHPAVAPLIAGGKL 273
Query: 394 VQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGF-LNVP-KIKGTHTAMKSGMLAAEAGFG 451
V+Y A + E G+ P V G I G AAG +N+ I+G A+ +G AA+
Sbjct: 274 VEYAAHVVPEAGMNMQPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAISAGEAAAKTVLS 333
Query: 452 VLHEDS 457
+ D
Sbjct: 334 AMKRDD 339
>sp|Q53208|FIXC_RHISN Protein FixC OS=Rhizobium sp. (strain NGR234) GN=fixC PE=3 SV=1
Length = 435
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 179/395 (45%), Gaps = 54/395 (13%)
Query: 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELL 167
+D ++VGAG +G +AA + + L V +E+G G+ + G + L ++
Sbjct: 6 FDAIVVGAGMSGNAAAYTMA------SRGLKVLQLERGEYPGSKNVQGAILYANMLETII 59
Query: 168 PQWKQEEAPIRVPVSSDKFWFLTKD--------RAFSLPSPFSNRGNYVISLSQLVRWLG 219
P ++ ++AP+ + +FW +T D R+ P NR Y I +Q +W
Sbjct: 60 PDFR-DDAPLERHLVEQRFW-VTDDTSHTGMHYRSDDFNEPAPNR--YTIIRAQFDKWFS 115
Query: 220 GKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLL 279
K G + +E+ DA KVIG+ T+ G GV + + +L
Sbjct: 116 RKVRAAGAIVLCETTVTELALDAAGKVIGVHTDRAG-------------GV-IHADVVVL 161
Query: 280 AEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNP--------GEILHT 331
AEG G L + R + + + AL +KE+ + E N G ++
Sbjct: 162 AEGVNGLLGTRA------RFRKVPKPEAVALAVKEMHFLPEEVINERFGLTGDQGCVIEA 215
Query: 332 LGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFL-NPYEEFQKFKHHPAIKPLLEG 390
G + + G FLY N I+LG+ +++ L +PY FK+HP+I+PLL G
Sbjct: 216 AG-TISRGMAGLGFLY-TNKESISLGIGCLVSHFAATLESPYALLDAFKNHPSIRPLLAG 273
Query: 391 GTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGF 450
+ +Y A + EGG ++IP G ++G AA N +G++ AM SG +A EA
Sbjct: 274 SEIKEYAAHLIPEGGFKAIPQLFGDGWVVVGDAAQLNNAVHREGSNLAMTSGRIAGEAIA 333
Query: 451 GVLHE-----DSNMEIYWDTLQKSWVWQELQRARN 480
+ N+ +Y L KS+V ++L++ ++
Sbjct: 334 AIKSRKHPMTSDNLSLYKAMLDKSFVLKDLRKYKD 368
>sp|Q7AHT0|FIXC_ECO57 Protein FixC OS=Escherichia coli O157:H7 GN=fixC PE=3 SV=1
Length = 428
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 158/335 (47%), Gaps = 50/335 (14%)
Query: 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELL 167
+D +IVGAG AG AA+ L RE V V+E+G GA ++G +L ++
Sbjct: 6 FDAIIVGAGLAGSVAAL---VLAREGA---QVLVIERGNSAGAKNVTGGRLYAHSLEHII 59
Query: 168 PQWKQEEAPIRVPVSSDKFWFLTKDRAFSL-------PSPFSNRGNYVISLSQLVRWLGG 220
P + E AP+ ++ +K F+T+ A ++ SP S R +Y + S+ WL
Sbjct: 60 PGFA-ESAPVERLITHEKLAFMTEKSAMTMDYCNGDETSP-SQR-SYSVLRSKFDAWLME 116
Query: 221 KAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLA 280
+AEE G ++ G L D KV+G+ + G + + +LA
Sbjct: 117 QAEEAGAQLITGIRVDN-LVQRDGKVVGVEAD----------------GDVIEAKTVILA 159
Query: 281 EGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEG--------KHNPGEILHTL 332
+G L+EKL +++ + A+G+KE+ E+ + + N G
Sbjct: 160 DGVNSILAEKLGMAKRVKPTN------VAVGVKELIELPKSVIEDRFQLQGNQGAACLFA 213
Query: 333 GWPLDQKTYGGSFLYHMNDRQIALGLVVALNY-HNPFLNPYEEFQKFKHHPAIKPLLEGG 391
G P D GG FLY N+ ++LGLV L++ H+ + + + FK HPA+ PL+ GG
Sbjct: 214 GSPTD-GLMGGGFLY-TNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGG 271
Query: 392 TVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGF 426
+V+Y A + E G+ +P V G I G AAG
Sbjct: 272 KLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGM 306
>sp|Q83SQ7|FIXC_SHIFL Protein FixC OS=Shigella flexneri GN=fixC PE=3 SV=1
Length = 428
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 157/335 (46%), Gaps = 50/335 (14%)
Query: 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELL 167
+D +IVGAG AG AA+ L RE V V+E+G GA ++G +L ++
Sbjct: 6 FDAIIVGAGLAGSVAAL---VLAREGA---QVLVIERGNSAGAKNVTGGRLYAHSLEHII 59
Query: 168 PQWKQEEAPIRVPVSSDKFWFLTKDRAFSL-------PSPFSNRGNYVISLSQLVRWLGG 220
P + + AP+ ++ +K F+T+ A ++ SP S R +Y + S+ WL
Sbjct: 60 PGFA-DSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSP-SQR-SYSVLRSKFDAWLME 116
Query: 221 KAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLA 280
+AEE G ++ G L D KV+G+ + G + + LLA
Sbjct: 117 QAEEAGAQLITGIRVDN-LVQRDGKVVGVEAD----------------GDVIEAKTVLLA 159
Query: 281 EGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEG--------KHNPGEILHTL 332
+G L+EKL +++ A+G+KE+ E+ + + N G
Sbjct: 160 DGVNSILAEKLGMAKRVKPTD------VAVGVKELIELPKSVIEDRFQLQGNQGAACLFA 213
Query: 333 GWPLDQKTYGGSFLYHMNDRQIALGLVVALNY-HNPFLNPYEEFQKFKHHPAIKPLLEGG 391
G P D GG FLY N+ ++LGLV L++ H+ + + + FK HPA+ PL+ GG
Sbjct: 214 GSPTD-GLMGGGFLY-TNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGG 271
Query: 392 TVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGF 426
+V+Y A + E G+ +P V G I G AAG
Sbjct: 272 KLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGM 306
>sp|P68644|FIXC_ECOLI Protein FixC OS=Escherichia coli (strain K12) GN=fixC PE=3 SV=1
Length = 428
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 157/335 (46%), Gaps = 50/335 (14%)
Query: 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELL 167
+D +IVGAG AG AA+ L RE V V+E+G GA ++G +L ++
Sbjct: 6 FDAIIVGAGLAGSVAAL---VLAREGA---QVLVIERGNSAGAKNVTGGRLYAHSLEHII 59
Query: 168 PQWKQEEAPIRVPVSSDKFWFLTKDRAFSL-------PSPFSNRGNYVISLSQLVRWLGG 220
P + + AP+ ++ +K F+T+ A ++ SP S R +Y + S+ WL
Sbjct: 60 PGFA-DSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSP-SQR-SYSVLRSKFDAWLME 116
Query: 221 KAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLA 280
+AEE G ++ G L D KV+G+ + G + + +LA
Sbjct: 117 QAEEAGAQLITGIRVDN-LVQRDGKVVGVEAD----------------GDVIEAKTVILA 159
Query: 281 EGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEG--------KHNPGEILHTL 332
+G L+EKL +++ A+G+KE+ E+ + + N G
Sbjct: 160 DGVNSILAEKLGMAKRVKPTD------VAVGVKELIELPKSVIEDRFQLQGNQGAACLFA 213
Query: 333 GWPLDQKTYGGSFLYHMNDRQIALGLVVALNY-HNPFLNPYEEFQKFKHHPAIKPLLEGG 391
G P D GG FLY N+ ++LGLV L++ H+ + + + FK HPA+ PL+ GG
Sbjct: 214 GSPTD-GLMGGGFLY-TNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGG 271
Query: 392 TVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGF 426
+V+Y A + E G+ +P V G I G AAG
Sbjct: 272 KLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGM 306
>sp|P68645|FIXC_ECOL6 Protein FixC OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928
/ UPEC) GN=fixC PE=3 SV=1
Length = 428
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 157/335 (46%), Gaps = 50/335 (14%)
Query: 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELL 167
+D +IVGAG AG AA+ L RE V V+E+G GA ++G +L ++
Sbjct: 6 FDAIIVGAGLAGSVAAL---VLAREGA---QVLVIERGNSAGAKNVTGGRLYAHSLEHII 59
Query: 168 PQWKQEEAPIRVPVSSDKFWFLTKDRAFSL-------PSPFSNRGNYVISLSQLVRWLGG 220
P + + AP+ ++ +K F+T+ A ++ SP S R +Y + S+ WL
Sbjct: 60 PGFA-DSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSP-SQR-SYSVLRSKFDAWLME 116
Query: 221 KAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLA 280
+AEE G ++ G L D KV+G+ + G + + +LA
Sbjct: 117 QAEEAGAQLITGIRVDN-LVQRDGKVVGVEAD----------------GDVIEAKTVILA 159
Query: 281 EGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEG--------KHNPGEILHTL 332
+G L+EKL +++ A+G+KE+ E+ + + N G
Sbjct: 160 DGVNSILAEKLGMAKRVKPTD------VAVGVKELIELPKSVIEDRFQLQGNQGAACLFA 213
Query: 333 GWPLDQKTYGGSFLYHMNDRQIALGLVVALNY-HNPFLNPYEEFQKFKHHPAIKPLLEGG 391
G P D GG FLY N+ ++LGLV L++ H+ + + + FK HPA+ PL+ GG
Sbjct: 214 GSPTD-GLMGGGFLY-TNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGG 271
Query: 392 TVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGF 426
+V+Y A + E G+ +P V G I G AAG
Sbjct: 272 KLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGM 306
>sp|P10331|FIXC_BRAJA Protein FixC OS=Bradyrhizobium japonicum (strain USDA 110) GN=fixC
PE=3 SV=2
Length = 435
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 170/372 (45%), Gaps = 54/372 (14%)
Query: 137 LSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFWFLTKDRA-- 194
+ V +E+G G+ + G + + +L+P+++ EEAP+ + +FW + DR+
Sbjct: 29 MKVLQLERGEYPGSKNVQGAILYADMMEKLIPEFR-EEAPLERHLIEQRFWMM-DDRSHV 86
Query: 195 --------FSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKV 246
F+ P NR Y I +Q +W K E G + +E+ D N+V
Sbjct: 87 GMHYRSEDFNEQRP--NR--YTIIRAQFDKWFSSKVREAGAIVLCETTVTELAQDDRNRV 142
Query: 247 IGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQ 306
+G+ T+ +R E+ + +LAEG G L + LR + +
Sbjct: 143 VGVRTD--------------RRDGEIHADVVVLAEGVNGLLGTRA----GLRARPAPDN- 183
Query: 307 TYALGIKEV----WEIDEGKHN----PGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGL 358
AL +KE+ E E + N G ++ G + + G F+Y N I+LG+
Sbjct: 184 -VALAVKEMHFLPRETIEARFNLKGDEGVVIEAAG-TISRGMTGMGFIY-ANKECISLGI 240
Query: 359 -VVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGG 417
+ ++ PY +FK HP++ PL+ G V +Y A + EGG +SIP G
Sbjct: 241 GCLVADFQRTGQTPYGLLDEFKRHPSVAPLIAGSEVKEYSAHLIPEGGYKSIPQLYGEGW 300
Query: 418 AIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHED------SNMEIYWDTLQKSWV 471
++G AA N +G++ AM SG +AAEA G++ +N+ IY L S+V
Sbjct: 301 VVVGDAAQLNNAVHREGSNLAMTSGRIAAEA-IGLVKSRGEPMSATNLSIYKKMLDDSFV 359
Query: 472 WQELQRARNYRP 483
++L++ ++ P
Sbjct: 360 IKDLKKYKDLPP 371
>sp|P77337|YDIS_ECOLI Probable electron transfer flavoprotein-quinone oxidoreductase YdiS
OS=Escherichia coli (strain K12) GN=ydiS PE=3 SV=1
Length = 429
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 150/333 (45%), Gaps = 46/333 (13%)
Query: 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELL 167
+D ++VGAG AG AA+ + + L V V+E+G G ++G L ++
Sbjct: 6 FDAIVVGAGVAGSVAALVMAR------AGLDVLVIERGDSAGCKNMTGGRLYAHTLEAII 59
Query: 168 PQWKQEEAPIRVPVSSDKFWFLTKDRAFSLP-----SPFSNRGNYVISLSQLVRWLGGKA 222
P + AP+ V+ +K FLT++ A +L +Y + ++L WL +A
Sbjct: 60 PGFAVS-APVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQA 118
Query: 223 EELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEG 282
E+ G + PG ++ + NKV G+ D L + +LA+G
Sbjct: 119 EQAGAQFIPGVRVDALVREG-NKVTGVQAGD----------------DILEANVVILADG 161
Query: 283 CRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNP--------GEILHTLGW 334
L ++ + S H YA+G+KEV + + N G G
Sbjct: 162 VNSMLG----RSLGMVPASDPHH--YAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGS 215
Query: 335 PLDQKTYGGSFLYHMNDRQIALGLVVAL-NYHNPFLNPYEEFQKFKHHPAIKPLLEGGTV 393
P D GG FLY N I+LGLV L + + + + + FK HPAI+PL+ GG +
Sbjct: 216 PSD-GLMGGGFLY-TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKL 273
Query: 394 VQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGF 426
++Y A + EGGL +P V G I+G AAGF
Sbjct: 274 LEYSAHMVPEGGLAMVPQLVNEGVMIVGDAAGF 306
>sp|P09820|FIXC_RHIME Protein FixC OS=Rhizobium meliloti (strain 1021) GN=fixC PE=3 SV=1
Length = 435
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 174/393 (44%), Gaps = 50/393 (12%)
Query: 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELL 167
+D ++VGAG +G +AA + + L V +E+G G+ + G + L ++
Sbjct: 6 FDAIVVGAGMSGNAAAYAMA------SRGLKVLQLERGEYPGSKNVQGAIMYANMLEAII 59
Query: 168 PQWKQEEAPIRVPVSSDKFWFLTKD-------RAFSLPSPFSNRGNYVISLSQLVRWLGG 220
P ++ + AP+ + +FW + R+ NR Y I +Q +WL
Sbjct: 60 PDFRND-APLERHLVEQRFWIMDDTSHTGMHYRSDDFNEVTPNR--YTIIRAQFDKWLSR 116
Query: 221 KAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLA 280
K E G + A+ + +D+ K IG+ T+ + G + + +LA
Sbjct: 117 KVCEAGGTVLCETTATGLEWDSAGKAIGVRTD--------------RAGDVVLADVVVLA 162
Query: 281 EGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDE-------GKHNPGEILHTLG 333
EG G L + LRE +++ AL +KE+ + E G + G
Sbjct: 163 EGVNGLLGTRA----GLREMPKSKN--VALAVKELHFLPEEVIAERFGLTGDEGCVIEAG 216
Query: 334 WPLDQKTYGGSFLYHMNDRQIALGL-VVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGT 392
+ + G FLY N I+LG+ + N+ PY FK HP+I+PL+ G
Sbjct: 217 GTISRGMAGLGFLY-TNKESISLGIGCLISNFAETMERPYALLDAFKRHPSIQPLIAGSE 275
Query: 393 VVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEA---- 448
V +Y A + EGG +IP G ++G AA N +G++ AM SG +A EA
Sbjct: 276 VKEYAAHLIPEGGFNAIPRLCGNGWVVVGDAAQLNNAVHREGSNLAMASGRMAGEAISII 335
Query: 449 -GFGVLHEDSNMEIYWDTLQKSWVWQELQRARN 480
G + + +++ +Y L KS+V ++L + ++
Sbjct: 336 KSRGGVMDKASLSLYKTMLDKSFVVEDLSKQKD 368
>sp|Q46904|YGCN_ECOLI Probable electron transfer flavoprotein-quinone oxidoreductase YgcN
OS=Escherichia coli (strain K12) GN=ygcN PE=3 SV=2
Length = 423
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 161/365 (44%), Gaps = 47/365 (12%)
Query: 131 REKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFWFLT 190
R LSV ++E+ G+ +SG AL ELLPQ+ AP+ ++ + LT
Sbjct: 22 RCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLT-APLERRITHESLSLLT 80
Query: 191 KDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIG 250
D + S ++ + ++ WL +AE+ GVE PG A + LY+ + +V G+
Sbjct: 81 PDGVTTFSSLQPGGESWSVLRARFDPWLVAEAEKEGVECIPG-ATVDALYEENGRVCGVI 139
Query: 251 TNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYAL 310
D LR R +LAEG L+E+ R A AL
Sbjct: 140 CGDD----------------ILRARYVVLAEGANSVLAER--HGLVTRPAGEAM----AL 177
Query: 311 GIKEVWEIDEG--------KHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL 362
GIKEV ++ ++N G L G D GG+FLY N + ++LG+V L
Sbjct: 178 GIKEVLSLETSAIEERFHLENNEGAALLFSGRICDDLP-GGAFLY-TNQQTLSLGIVCPL 235
Query: 363 NYHNPFLNPYEEF-QKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYP------VFP 415
+ P E +FK HPA++PL++ ++YGA + EGGL S+P +
Sbjct: 236 SSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLV 295
Query: 416 GGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH--EDSNM-EIYWDTLQKSWVW 472
G A+ C ++V +G A+ AA+ E N+ +Y +++S +W
Sbjct: 296 GDALRSCVNTGISV---RGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLW 352
Query: 473 QELQR 477
LQR
Sbjct: 353 DVLQR 357
>sp|P53572|FIXC_AZOVI Protein FixC OS=Azotobacter vinelandii GN=fixC PE=3 SV=1
Length = 427
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 161/370 (43%), Gaps = 52/370 (14%)
Query: 137 LSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFWFLTKD---- 192
L V +E+G G+ + G + A+ +++P ++ ++AP+ + + W +
Sbjct: 28 LKVLQIERGETPGSKNVQGAILYADAIEKIIPDFR-DDAPLERHLIEQRVWVMDDASYGY 86
Query: 193 --RAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYD---ADNKVI 247
R+ P NR Y I +W KA E GV E +D KV+
Sbjct: 87 HYRSEDFNKPPYNR--YTIIRVHFDQWFNKKAREAGV-----LTICETRHDLLIEGGKVV 139
Query: 248 GIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQT 307
G+ T+ ++G E+R +LA+G L+ K F S Q +
Sbjct: 140 GVRTD--------------RQGGEVRADAVILADGVNSRLAVK--AGF-----SRDQPEN 178
Query: 308 YALGIKEV----WEIDEGKHNPGE--ILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVA 361
+AL +KE+ E E + N GE + +D G FLY N I LG+
Sbjct: 179 WALAVKEIHFLPQETMEARFNIGEEEAAIEMAGKIDAGMMGTGFLY-TNKESITLGVGCM 237
Query: 362 L-NYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAII 420
L ++ ++PYE + K HP+I PL+ G + +Y A + EGG +IP V+ G +I
Sbjct: 238 LSDFKQQKISPYELLDRMKTHPSIAPLIAGSDMKEYAAHLIPEGGYNAIP-QVYGDGWMI 296
Query: 421 GCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHED-----SNMEIYWDTLQKSWVWQEL 475
A + +G++ AM +GMLAA+ + D +N+ Y L S+V ++L
Sbjct: 297 AGDAPIRHGIHREGSNLAMTTGMLAAQTLVELRAADKPFSAANLAEYKKKLDDSFVMKDL 356
Query: 476 QRARNYRPAF 485
++ R F
Sbjct: 357 KKYRRMPEIF 366
>sp|P09821|FIXC_RHILE Protein FixC (Fragment) OS=Rhizobium leguminosarum GN=fixC PE=3
SV=1
Length = 163
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 390 GGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAG 449
G + +Y A + EGG ++IP G ++G AA N +G++ AM SG++A EA
Sbjct: 1 GSEIKEYAAHLIPEGGFKAIPQLFGNGWVVVGDAAQLNNAVHREGSNLAMTSGLMAGEAI 60
Query: 450 F-----GVLHEDSNMEIYWDTLQKSWVWQELQRARN 480
F G L N+ +Y L KS+V ++L + ++
Sbjct: 61 FQIKSRGGLMTKRNLSLYKGMLGKSFVMKDLMKHKD 96
>sp|O29786|GGR_ARCFU Digeranylgeranylglycerophospholipid reductase OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_0464 PE=1 SV=2
Length = 387
Score = 40.8 bits (94), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 85/216 (39%), Gaps = 38/216 (17%)
Query: 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALN--- 164
YDVV+VGAGPAG AA + E+ L V +VEK E+G + ++
Sbjct: 2 YDVVVVGAGPAGSMAA----KTAAEQG--LKVLLVEKRQEIGTPVRCAEGISRESIEKFF 55
Query: 165 ELLPQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEE 224
E+ +W I V+ K + K N YV+ R + A +
Sbjct: 56 EVDKKW------IAAEVTGAKIYAPNKTEIVMSEEMAGNEVGYVLERKIFDRHVARLAAK 109
Query: 225 LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQR---GVELRGRITLLAE 281
G E+Y A + D + KDG K +R E+ +I + A+
Sbjct: 110 AGAEVYVKTA----MVDFER-------------KDGKVKVKLRRLGEDWEVETKILIGAD 152
Query: 282 GCRGSLSEK--LIKNFKLRE-KSHAQHQTYALGIKE 314
G + K +IK KL E +S AQ+ L I E
Sbjct: 153 GVESKIGRKAGIIKTLKLNEVESCAQYLMTGLDIDE 188
>sp|P47348|TRXB_MYCGE Thioredoxin reductase OS=Mycoplasma genitalium (strain ATCC 33530 /
G-37 / NCTC 10195) GN=trxB PE=3 SV=1
Length = 315
Score = 39.3 bits (90), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 7/59 (11%)
Query: 101 MCRESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFE 159
+ ++ + YD+VIVGAGPAG+++AI K +L++ ++E G G I+ N+ E
Sbjct: 9 LTKDQVIYDLVIVGAGPAGIASAI------YGKRANLNLAIIE-GNTPGGKIVKTNIVE 60
>sp|O32823|TRXB_LISMO Thioredoxin reductase OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=trxB PE=3 SV=1
Length = 319
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 101 MCRESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNV 157
M E YDV+I+GAGPAG++AA+ + DL ++E+G G + + V
Sbjct: 1 MASEEKIYDVIIIGAGPAGMTAALYTSR------ADLDTLMIERGVPGGQMVNTAEV 51
>sp|P15245|PH2M_TRICU Phenol 2-monooxygenase OS=Trichosporon cutaneum PE=1 SV=3
Length = 665
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 101 MCRESMAY-DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEK 144
M + S +Y DV+IVGAGPAGL AA L + R+K DL V +++K
Sbjct: 1 MTKYSESYCDVLIVGAGPAGLMAARVLSEYVRQKP-DLKVRIIDK 44
>sp|Q928B5|TRXB_LISIN Thioredoxin reductase OS=Listeria innocua serovar 6a (strain CLIP
11262) GN=trxB PE=3 SV=1
Length = 319
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 101 MCRESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNV 157
M E YDV+I+GAGPAG++AA+ + DL ++E+G G + + V
Sbjct: 1 MASEEKIYDVIIIGAGPAGMTAALYTSR------ADLDTLMIERGVPGGQMVNTAEV 51
>sp|P32397|PPOX_BACSU Protoporphyrinogen oxidase OS=Bacillus subtilis (strain 168)
GN=hemY PE=1 SV=1
Length = 470
Score = 37.4 bits (85), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 110 VVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152
VVI+G G GL+AA +++ +EKN+ L + +VE VG I
Sbjct: 8 VVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKI 50
>sp|Q58931|TRXB_METJA Putative thioredoxin reductase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1536 PE=3 SV=1
Length = 301
Score = 37.0 bits (84), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 16/105 (15%)
Query: 106 MAYDVVIVGAGPAGLSAAI-----RLKQLCREKNVDLSVCVVEKGAEVGAHIISGNV--F 158
M +D +I+GAGP GL+A I +L LC EK G + I N F
Sbjct: 1 MIHDTIIIGAGPGGLTAGIYAMRGKLNALCIEKE--------NAGGRIAEAGIVENYPGF 52
Query: 159 EPRALNELLPQWKQEEAPIRVPVSSDKFWFL-TKDRAFSLPSPFS 202
E EL ++K ++P+ D+ + TK+R F + + S
Sbjct: 53 EEIRGYELAEKFKNHAEKFKLPIIYDEVIKIETKERPFKVITKNS 97
>sp|Q8TUV8|GGR2_METKA Digeranylgeranylglycerophospholipid reductase 2 OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=MK1645 PE=3 SV=2
Length = 396
Score = 37.0 bits (84), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 147/379 (38%), Gaps = 67/379 (17%)
Query: 106 MAYDVVIVGAGPAG-LSAAIRLKQLCREKNVDLSVCVVEKGAEVG-----AHIISGNVFE 159
M +DVV+VGAGPAG ++A + C V ++E+ AE+G A IS + E
Sbjct: 1 MEFDVVVVGAGPAGSVAAWAAAEAGC-------DVLILERKAEIGVPKQCAEGISAHGLE 53
Query: 160 PRALNELLPQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLG 219
+ E +W E S + + F +P YV+ +WL
Sbjct: 54 HAGI-EPQDEWIATEI-------SRALIYAPNGKEFEVPGD-----GYVLERRVFDKWLV 100
Query: 220 GKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLL 279
+A E G E+ A L D + +V+G+ +DG E+R RI +
Sbjct: 101 VRAVEAGAEVELLAHARRALLD-EGRVVGVEYE----GEDGVH--------EVRARIVIA 147
Query: 280 AEGCRGSL--SEKLIKNFKLREK-SHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPL 336
A+G + + L+ + K E + AQ++ + ++E + H + +
Sbjct: 148 ADGIESRIGRTAGLVPSLKPVEMCTCAQYEMVGVDVEE-----DATH----------FFV 192
Query: 337 DQKTYGGSF--LYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVV 394
D + + G + ++ + + +GL + + P + + H I + V
Sbjct: 193 DAEFFPGGYFWIFPKGEGRANVGLGIRGSESEPGDALKVLNRALEDHELISEAVADAVPV 252
Query: 395 QYGARTLNEGGLQS---IPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 451
+ +N GG+ + G ++G AA +N G HT++ G +A E
Sbjct: 253 E-----VNVGGVPVCGPVERTYGDGILLVGDAARQVNPLTGGGLHTSLVCGRIAGEVAAE 307
Query: 452 VLHEDSNMEIYWDTLQKSW 470
+ ED + Q W
Sbjct: 308 AIEEDDTSASFLKRYQDRW 326
>sp|Q8TVE9|GGR1_METKA Digeranylgeranylglycerophospholipid reductase 1 OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=MK1443 PE=3 SV=1
Length = 375
Score = 36.6 bits (83), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 73/183 (39%), Gaps = 39/183 (21%)
Query: 106 MAYDVVIVGAGPAG-LSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALN 164
M +DVV+VGAGPAG ++A + C V ++E+ AE+G RAL
Sbjct: 1 MEFDVVVVGAGPAGSVAAWAAAEAGC-------DVLILERKAEIGVPKQCAEGISARALE 53
Query: 165 ELLPQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPSPFSNR-----GNYVISLSQLVRWLG 219
E V + D W + L P ++ YV+ +WL
Sbjct: 54 E-------------VGIRPDDGWIAAEIERGILSLPSGSKFEVEVEGYVLERRVFDKWLV 100
Query: 220 GKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLL 279
+A E G E+ A L D + +V+G+ +DG E+R RI +
Sbjct: 101 VRAVEAGAEVELLAHARRALLD-EGRVVGVEYE----GEDGVH--------EVRARIVIA 147
Query: 280 AEG 282
A+G
Sbjct: 148 ADG 150
>sp|P80880|TRXB_BACSU Thioredoxin reductase OS=Bacillus subtilis (strain 168) GN=trxB
PE=1 SV=3
Length = 316
Score = 36.6 bits (83), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 6/42 (14%)
Query: 104 ESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKG 145
E YDV+I+GAGPAG++AA+ + +LS ++E+G
Sbjct: 3 EEKIYDVIIIGAGPAGMTAAVYTSR------ANLSTLMIERG 38
>sp|P32318|THI4_YEAST Thiamine thiazole synthase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=THI4 PE=1 SV=1
Length = 326
Score = 36.2 bits (82), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKG-AEVGAHIISGNVFEPRALNELL 167
DV+IVGAG +GLSAA + + DL VC++E A G + G +F + +
Sbjct: 67 DVIIVGAGSSGLSAAYVIAK----NRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPA 122
Query: 168 PQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPSPFS 202
+ QE + +P + + + K A + + S
Sbjct: 123 HLFLQE---LEIPYEDEGDYVVVKHAALFISTVLS 154
>sp|B9DQ42|PUR9_STACT Bifunctional purine biosynthesis protein PurH OS=Staphylococcus
carnosus (strain TM300) GN=purH PE=3 SV=1
Length = 492
Score = 36.2 bits (82), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 221 KAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLA 280
KA ELG ++ P ++ I+ D++ +GIG M + GS + +R +E+ + L++
Sbjct: 381 KAMELGWKVVPSVKSNAIILSNDHQTVGIGAGQMN--RVGSAEIAIERAIEINDNVALVS 438
Query: 281 EG 282
+G
Sbjct: 439 DG 440
>sp|Q5UWH2|DLDH3_HALMA Dihydrolipoyl dehydrogenase 3 OS=Haloarcula marismortui (strain
ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=lpdA3
PE=3 SV=1
Length = 477
Score = 36.2 bits (82), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Query: 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGA 150
+ + DV+++GAGP G AAIR QL L V +VEKG GA
Sbjct: 7 TTSTDVLVIGAGPGGYVAAIRAAQLA------LDVTLVEKGEYGGA 46
>sp|Q02733|IRC15_YEAST Increased recombination centers protein 15 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IRC15 PE=1
SV=1
Length = 499
Score = 35.8 bits (81), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 99 SEMCRESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNV 157
S M + YDV+++G GP G +AA++ Q L+ CV ++ + GA+++ G V
Sbjct: 9 STMEDFAAVYDVLVIGCGPGGFTAAMQASQAGL-----LTACVDQRASLGGAYLVDGAV 62
>sp|Q3V7I4|THI4_YARLI Thiamine thiazole synthase OS=Yarrowia lipolytica (strain CLIB 122
/ E 150) GN=THI4 PE=3 SV=1
Length = 317
Score = 35.8 bits (81), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKG-AEVGAHIISGNVFEPRALNELL 167
DVVI+GAG GLSAA L + DL + +VE G A G + G +F + +
Sbjct: 69 DVVIIGAGSCGLSAAYVLAK----SRPDLKIAIVEAGVAPGGGAWLGGQLFSAMVMRKPA 124
Query: 168 PQWKQEEAPIRVPVSSDKFWFLTKDRAF 195
Q+ +E I VP + + + K A
Sbjct: 125 EQFLEE---IGVPYEDEGDYVVVKHAAL 149
>sp|P66006|STHA_MYCTU Probable soluble pyridine nucleotide transhydrogenase
OS=Mycobacterium tuberculosis GN=sthA PE=3 SV=1
Length = 468
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNE 165
YD+V++G+GP G AAI +L + SV +VE+G +G ++ + L E
Sbjct: 4 YDIVVIGSGPGGQKAAIASAKLGK------SVAIVERGRMLGGVCVNTGTIPSKTLRE 55
>sp|A5U665|STHA_MYCTA Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium
tuberculosis (strain ATCC 25177 / H37Ra) GN=sthA PE=3
SV=1
Length = 468
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNE 165
YD+V++G+GP G AAI +L + SV +VE+G +G ++ + L E
Sbjct: 4 YDIVVIGSGPGGQKAAIASAKLGK------SVAIVERGRMLGGVCVNTGTIPSKTLRE 55
>sp|C1AFH2|STHA_MYCBT Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium bovis
(strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=sthA
PE=3 SV=1
Length = 468
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNE 165
YD+V++G+GP G AAI +L + SV +VE+G +G ++ + L E
Sbjct: 4 YDIVVIGSGPGGQKAAIASAKLGK------SVAIVERGRMLGGVCVNTGTIPSKTLRE 55
>sp|A1KM51|STHA_MYCBP Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium bovis
(strain BCG / Pasteur 1173P2) GN=sthA PE=3 SV=1
Length = 468
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNE 165
YD+V++G+GP G AAI +L + SV +VE+G +G ++ + L E
Sbjct: 4 YDIVVIGSGPGGQKAAIASAKLGK------SVAIVERGRMLGGVCVNTGTIPSKTLRE 55
>sp|P66007|STHA_MYCBO Probable soluble pyridine nucleotide transhydrogenase
OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
GN=sthA PE=3 SV=1
Length = 468
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNE 165
YD+V++G+GP G AAI +L + SV +VE+G +G ++ + L E
Sbjct: 4 YDIVVIGSGPGGQKAAIASAKLGK------SVAIVERGRMLGGVCVNTGTIPSKTLRE 55
>sp|A9SMC8|THI44_PHYPA Thiamine thiazole synthase 4, chloroplastic OS=Physcomitrella
patens subsp. patens GN=THI1-4 PE=3 SV=1
Length = 343
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 22/156 (14%)
Query: 32 NQTNNL-QSQSSLANSIKTPSGYSPFRHFNQNPCFFSSGYFPNGVNLKGFG---RNESGV 87
+Q N+ S SSLA S + RH + P +S Y +L + ES V
Sbjct: 3 SQAGNVGSSSSSLAGVRMVVSPKAQLRHA-RLPAASASMYSDAKYDLNNYKFEPIKESIV 61
Query: 88 SCAKLFFRSFCSEMCRESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEK--- 144
A+ R + +EM + DVV+VGAG AGLS A L KN ++ V ++E+
Sbjct: 62 --AREMTRRYMTEMITHA-DTDVVVVGAGSAGLSCAYELS-----KNPNVKVAIIEQSVS 113
Query: 145 ---GAEVGAHIISGNVFEP---RALNELLPQWKQEE 174
GA +G + S V R L+E+ +++ E
Sbjct: 114 PGGGAWLGGQLFSAMVVRKPAHRFLDEIEVPYEELE 149
>sp|F6H7K5|THI42_VITVI Thiamine thiazole synthase 2, chloroplastic OS=Vitis vinifera
GN=THI1-2 PE=3 SV=1
Length = 355
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 16/129 (12%)
Query: 55 PFRHFNQNPCFFSSGYFPNGVNLKGFGRNESGVSCAKLFFRSFCSEMCRESMAYDVVIVG 114
P + +Q+P S P + F + + A+ R + +M + DVVIVG
Sbjct: 37 PIKVSHQSPTISMSSVSPYDLQSFKFEPIKESI-VAREMTRRYMMDMITYA-DTDVVIVG 94
Query: 115 AGPAGLSAAIRLKQLCREKNVDLSVCVVEK------GAEVGAHIISGNVFEPRA---LNE 165
AG AGLS A L KN + V ++E+ GA +G + S V A L+E
Sbjct: 95 AGSAGLSCAYELS-----KNPSIRVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHHFLDE 149
Query: 166 LLPQWKQEE 174
L ++ +++
Sbjct: 150 LGIEYDEQD 158
>sp|Q50068|DLDH_MYCLE Dihydrolipoyl dehydrogenase OS=Mycobacterium leprae (strain TN)
GN=lpd PE=3 SV=1
Length = 467
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Query: 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVE 143
YDVV++GAGP G AAIR QL LS VVE
Sbjct: 4 YDVVVLGAGPGGYVAAIRAAQL------GLSTAVVE 33
>sp|Q1QX78|STHA_CHRSD Soluble pyridine nucleotide transhydrogenase OS=Chromohalobacter
salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB
13768) GN=sthA PE=3 SV=1
Length = 463
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELL 167
+DVV++G+GPAG SAAI + + V +VEK VG + +AL +
Sbjct: 6 FDVVVIGSGPAGESAAINAAKHGKR------VAIVEKQQAVGGNCTHWGTIPSKALRHQV 59
Query: 168 PQWKQ 172
Q Q
Sbjct: 60 KQIMQ 64
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 246,216,283
Number of Sequences: 539616
Number of extensions: 11438809
Number of successful extensions: 27369
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 127
Number of HSP's that attempted gapping in prelim test: 27201
Number of HSP's gapped (non-prelim): 193
length of query: 592
length of database: 191,569,459
effective HSP length: 123
effective length of query: 469
effective length of database: 125,196,691
effective search space: 58717248079
effective search space used: 58717248079
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)