Query 007716
Match_columns 592
No_of_seqs 561 out of 4291
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 08:43:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007716.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007716hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gmh_A Electron transfer flavo 100.0 3.1E-81 1.1E-85 697.1 43.3 490 101-592 29-534 (584)
2 3oz2_A Digeranylgeranylglycero 100.0 1.6E-35 5.4E-40 312.9 31.4 339 107-485 4-350 (397)
3 3cgv_A Geranylgeranyl reductas 100.0 1E-31 3.6E-36 284.5 31.5 339 107-485 4-350 (397)
4 3atr_A Conserved archaeal prot 100.0 3.5E-31 1.2E-35 286.3 26.5 342 106-486 5-356 (453)
5 3rp8_A Flavoprotein monooxygen 100.0 2.3E-30 7.9E-35 275.8 25.7 329 105-486 21-371 (407)
6 3e1t_A Halogenase; flavoprotei 100.0 2.2E-29 7.6E-34 276.2 30.0 328 106-469 6-354 (512)
7 3nix_A Flavoprotein/dehydrogen 100.0 2.5E-29 8.6E-34 268.7 27.9 324 106-468 4-343 (421)
8 2qa2_A CABE, polyketide oxygen 100.0 7.7E-28 2.6E-32 262.8 34.0 335 105-486 10-351 (499)
9 2qa1_A PGAE, polyketide oxygen 100.0 8.9E-28 3E-32 262.4 34.4 336 104-486 8-350 (500)
10 1k0i_A P-hydroxybenzoate hydro 100.0 1.2E-28 4.2E-33 261.2 22.6 339 106-485 1-350 (394)
11 1pn0_A Phenol 2-monooxygenase; 100.0 6.7E-28 2.3E-32 271.6 29.9 351 106-486 7-424 (665)
12 3fmw_A Oxygenase; mithramycin, 100.0 5.5E-28 1.9E-32 267.6 28.1 334 105-486 47-395 (570)
13 3alj_A 2-methyl-3-hydroxypyrid 100.0 2.5E-28 8.6E-33 257.6 24.2 327 107-478 11-343 (379)
14 2x3n_A Probable FAD-dependent 100.0 2.2E-28 7.4E-33 259.8 22.4 332 106-486 5-360 (399)
15 2dkh_A 3-hydroxybenzoate hydro 100.0 1.8E-27 6.1E-32 267.5 29.9 346 106-486 31-415 (639)
16 3ihg_A RDME; flavoenzyme, anth 100.0 3.2E-27 1.1E-31 260.6 30.8 332 106-481 4-369 (535)
17 3c96_A Flavin-containing monoo 100.0 2.7E-27 9.1E-32 252.5 28.5 327 107-479 4-366 (410)
18 4hb9_A Similarities with proba 100.0 7.5E-28 2.6E-32 255.6 23.8 335 108-480 2-379 (412)
19 3i3l_A Alkylhalidase CMLS; fla 100.0 1.6E-27 5.4E-32 264.5 24.4 324 106-469 22-366 (591)
20 2vou_A 2,6-dihydroxypyridine h 100.0 1.3E-26 4.3E-31 246.1 27.3 326 106-486 4-369 (397)
21 2xdo_A TETX2 protein; tetracyc 99.9 2.8E-26 9.7E-31 243.5 21.9 318 106-481 25-381 (398)
22 2r0c_A REBC; flavin adenine di 99.9 1.3E-24 4.4E-29 240.2 31.1 332 106-485 25-381 (549)
23 3c4a_A Probable tryptophan hyd 99.9 2.7E-25 9.3E-30 234.6 17.5 318 108-485 1-331 (381)
24 2weu_A Tryptophan 5-halogenase 99.9 1.1E-23 3.8E-28 231.0 29.6 221 205-469 166-392 (511)
25 2aqj_A Tryptophan halogenase, 99.9 1.2E-23 4.1E-28 232.1 24.0 218 205-469 158-384 (538)
26 2pyx_A Tryptophan halogenase; 99.9 8.1E-24 2.8E-28 232.8 21.7 227 206-469 169-400 (526)
27 2e4g_A Tryptophan halogenase; 99.9 6E-23 2.1E-27 226.9 25.7 225 206-469 188-415 (550)
28 3ihm_A Styrene monooxygenase A 99.9 8.7E-21 3E-25 203.3 22.1 310 105-467 20-360 (430)
29 2bry_A NEDD9 interacting prote 99.7 1.2E-16 4E-21 174.2 21.5 143 105-289 90-234 (497)
30 1ryi_A Glycine oxidase; flavop 99.7 4.6E-16 1.6E-20 163.4 19.6 288 105-452 15-362 (382)
31 1yvv_A Amine oxidase, flavin-c 99.7 5.8E-15 2E-19 152.0 22.8 149 106-288 1-165 (336)
32 1y56_B Sarcosine oxidase; dehy 99.6 1.1E-14 3.9E-19 152.8 23.6 157 106-286 4-206 (382)
33 2gag_B Heterotetrameric sarcos 99.6 1.3E-14 4.3E-19 153.5 23.9 197 207-452 169-375 (405)
34 3dme_A Conserved exported prot 99.6 2.2E-14 7.7E-19 149.2 21.7 170 106-298 3-220 (369)
35 3nyc_A D-arginine dehydrogenas 99.6 1.5E-14 5.1E-19 151.4 20.2 166 105-298 7-219 (381)
36 3pvc_A TRNA 5-methylaminomethy 99.6 7.7E-14 2.6E-18 158.0 20.7 156 106-286 263-470 (689)
37 3ps9_A TRNA 5-methylaminomethy 99.6 6.7E-14 2.3E-18 158.3 19.3 157 107-286 272-474 (676)
38 2gf3_A MSOX, monomeric sarcosi 99.6 2E-13 6.9E-18 143.4 21.3 70 206-296 144-213 (389)
39 3da1_A Glycerol-3-phosphate de 99.5 7.7E-13 2.6E-17 146.1 25.7 218 207-453 165-392 (561)
40 2oln_A NIKD protein; flavoprot 99.5 5.2E-13 1.8E-17 140.9 21.0 71 206-297 147-217 (397)
41 2qcu_A Aerobic glycerol-3-phos 99.5 2.3E-12 8E-17 140.5 26.0 217 207-453 144-373 (501)
42 3jsk_A Cypbp37 protein; octame 99.5 2E-13 6.9E-18 139.8 13.6 158 105-294 77-260 (344)
43 3axb_A Putative oxidoreductase 99.5 9.7E-13 3.3E-17 141.3 19.3 74 206-298 175-264 (448)
44 1qo8_A Flavocytochrome C3 fuma 99.5 5E-13 1.7E-17 148.0 16.1 174 104-296 118-322 (566)
45 4dgk_A Phytoene dehydrogenase; 99.5 1.5E-11 5.1E-16 133.9 27.5 62 212-289 221-282 (501)
46 4at0_A 3-ketosteroid-delta4-5a 99.4 1.3E-12 4.3E-17 142.9 17.4 71 213-296 203-274 (510)
47 2i0z_A NAD(FAD)-utilizing dehy 99.4 8.9E-13 3E-17 141.7 15.8 155 105-285 24-191 (447)
48 3kkj_A Amine oxidase, flavin-c 99.4 6.4E-13 2.2E-17 130.6 12.7 41 106-152 1-41 (336)
49 3dje_A Fructosyl amine: oxygen 99.4 1.9E-12 6.4E-17 138.6 17.3 159 106-286 5-222 (438)
50 3nlc_A Uncharacterized protein 99.4 1.4E-12 4.7E-17 142.7 15.5 153 105-298 105-290 (549)
51 1rp0_A ARA6, thiazole biosynth 99.4 1.9E-12 6.5E-17 130.5 15.1 146 106-291 38-197 (284)
52 1y0p_A Fumarate reductase flav 99.4 5.3E-12 1.8E-16 139.9 19.8 173 105-296 124-327 (571)
53 3c4n_A Uncharacterized protein 99.4 1.5E-11 5E-16 130.4 22.0 158 106-285 35-236 (405)
54 3v76_A Flavoprotein; structura 99.4 3.3E-12 1.1E-16 135.7 15.8 158 106-298 26-207 (417)
55 2cul_A Glucose-inhibited divis 99.4 2.2E-12 7.5E-17 126.0 12.3 126 106-288 2-128 (232)
56 2gjc_A Thiazole biosynthetic e 99.4 5.7E-12 1.9E-16 128.3 14.8 157 105-293 63-247 (326)
57 2gqf_A Hypothetical protein HI 99.3 1.2E-11 4.1E-16 130.8 16.1 146 107-298 4-188 (401)
58 2uzz_A N-methyl-L-tryptophan o 99.3 5.8E-12 2E-16 131.5 13.0 63 206-286 143-205 (372)
59 3ces_A MNMG, tRNA uridine 5-ca 99.3 5.5E-12 1.9E-16 139.1 13.4 150 106-286 27-182 (651)
60 4a9w_A Monooxygenase; baeyer-v 99.3 6.1E-12 2.1E-16 130.0 13.0 130 107-286 3-133 (357)
61 1c0p_A D-amino acid oxidase; a 99.3 6.2E-11 2.1E-15 123.4 19.7 37 105-147 4-40 (363)
62 3cp8_A TRNA uridine 5-carboxym 99.3 1.1E-11 3.8E-16 136.7 14.1 152 104-286 18-175 (641)
63 3ka7_A Oxidoreductase; structu 99.3 2.6E-10 9.1E-15 121.1 24.5 58 212-286 196-253 (425)
64 2zxi_A TRNA uridine 5-carboxym 99.3 9.7E-12 3.3E-16 136.7 13.5 150 106-286 26-181 (637)
65 2wdq_A Succinate dehydrogenase 99.3 2E-11 6.7E-16 135.4 16.2 67 211-287 142-208 (588)
66 1d4d_A Flavocytochrome C fumar 99.3 1.3E-11 4.5E-16 136.6 14.7 172 106-296 125-327 (572)
67 2h88_A Succinate dehydrogenase 99.3 2.5E-11 8.7E-16 134.9 16.8 164 105-287 16-219 (621)
68 3i6d_A Protoporphyrinogen oxid 99.3 7.8E-11 2.7E-15 126.8 19.3 47 106-152 4-50 (470)
69 3nrn_A Uncharacterized protein 99.3 3.1E-10 1.1E-14 120.6 23.3 56 212-286 189-244 (421)
70 3k7m_X 6-hydroxy-L-nicotine ox 99.3 1.5E-10 5.2E-15 123.3 19.9 40 108-153 2-41 (431)
71 2rgh_A Alpha-glycerophosphate 99.3 2.7E-10 9.3E-15 125.9 22.2 67 208-285 184-250 (571)
72 3gwf_A Cyclohexanone monooxyge 99.3 4.2E-11 1.4E-15 131.4 15.3 135 106-286 7-148 (540)
73 1pj5_A N,N-dimethylglycine oxi 99.3 2.3E-11 7.9E-16 140.6 13.6 167 106-298 3-217 (830)
74 2ywl_A Thioredoxin reductase r 99.3 6.2E-11 2.1E-15 110.6 14.0 114 108-290 2-115 (180)
75 4a5l_A Thioredoxin reductase; 99.2 8.9E-12 3E-16 126.8 8.8 119 107-286 4-122 (314)
76 3ab1_A Ferredoxin--NADP reduct 99.2 2.8E-11 9.6E-16 125.9 12.7 120 106-286 13-132 (360)
77 3gyx_A Adenylylsulfate reducta 99.2 5.4E-11 1.9E-15 133.1 15.4 172 105-287 20-235 (662)
78 1w4x_A Phenylacetone monooxyge 99.2 8.8E-11 3E-15 129.2 15.1 138 106-286 15-155 (542)
79 4fk1_A Putative thioredoxin re 99.2 4.4E-11 1.5E-15 121.5 11.7 114 106-286 5-118 (304)
80 4ap3_A Steroid monooxygenase; 99.2 7.3E-11 2.5E-15 129.8 14.2 137 106-285 20-159 (549)
81 2xve_A Flavin-containing monoo 99.2 8.3E-11 2.8E-15 126.9 13.9 150 107-286 2-167 (464)
82 2zbw_A Thioredoxin reductase; 99.2 3.5E-11 1.2E-15 123.6 10.1 119 106-286 4-122 (335)
83 3lzw_A Ferredoxin--NADP reduct 99.2 8.4E-11 2.9E-15 120.2 12.8 118 106-285 6-123 (332)
84 4gcm_A TRXR, thioredoxin reduc 99.2 6.9E-11 2.4E-15 120.3 12.0 113 106-286 5-117 (312)
85 3f8d_A Thioredoxin reductase ( 99.2 1.1E-10 3.7E-15 118.8 13.2 114 105-286 13-126 (323)
86 3g3e_A D-amino-acid oxidase; F 99.2 2E-10 6.9E-15 119.0 15.2 149 108-286 1-187 (351)
87 1kf6_A Fumarate reductase flav 99.2 1.2E-10 4.1E-15 129.5 14.3 67 211-288 133-200 (602)
88 3fpz_A Thiazole biosynthetic e 99.2 1.1E-10 3.7E-15 120.0 12.7 53 105-161 63-115 (326)
89 2e5v_A L-aspartate oxidase; ar 99.2 1.9E-10 6.5E-15 124.3 15.2 146 109-288 1-179 (472)
90 4b1b_A TRXR, thioredoxin reduc 99.2 7.6E-12 2.6E-16 136.9 4.2 148 105-286 40-198 (542)
91 3uox_A Otemo; baeyer-villiger 99.2 5.7E-11 2E-15 130.5 10.9 138 106-286 8-148 (545)
92 1s3e_A Amine oxidase [flavin-c 99.2 3E-09 1E-13 116.3 23.8 41 106-152 3-43 (520)
93 1jnr_A Adenylylsulfate reducta 99.2 1.5E-10 5.2E-15 129.7 13.7 163 105-287 20-220 (643)
94 2ivd_A PPO, PPOX, protoporphyr 99.2 4.5E-10 1.5E-14 121.4 16.8 41 106-152 15-55 (478)
95 2bs2_A Quinol-fumarate reducta 99.1 3.4E-10 1.2E-14 126.7 16.1 66 211-287 157-222 (660)
96 1chu_A Protein (L-aspartate ox 99.1 1.3E-10 4.3E-15 127.7 11.6 66 212-287 138-210 (540)
97 2q7v_A Thioredoxin reductase; 99.1 2E-10 7E-15 117.5 12.3 116 106-286 7-124 (325)
98 2gv8_A Monooxygenase; FMO, FAD 99.1 2.6E-10 8.8E-15 122.4 13.5 162 106-286 5-178 (447)
99 3itj_A Thioredoxin reductase 1 99.1 1.6E-10 5.6E-15 118.4 11.1 121 104-286 19-143 (338)
100 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 3.2E-10 1.1E-14 117.0 13.2 138 108-283 2-163 (342)
101 2q0l_A TRXR, thioredoxin reduc 99.1 3E-10 1E-14 115.3 12.6 113 108-286 2-115 (311)
102 1mo9_A ORF3; nucleotide bindin 99.1 1.6E-09 5.4E-14 118.6 19.0 71 212-298 255-328 (523)
103 3d1c_A Flavin-containing putat 99.1 1.1E-10 3.7E-15 121.5 9.2 136 107-286 4-144 (369)
104 3fbs_A Oxidoreductase; structu 99.1 2.1E-10 7.2E-15 115.3 10.9 112 106-286 1-113 (297)
105 3urh_A Dihydrolipoyl dehydroge 99.1 5.9E-11 2E-15 129.0 6.6 148 105-285 23-170 (491)
106 2vvm_A Monoamine oxidase N; FA 99.1 2.5E-09 8.4E-14 116.2 19.4 57 212-285 255-312 (495)
107 1vdc_A NTR, NADPH dependent th 99.1 2.4E-10 8.2E-15 117.2 10.6 115 106-286 7-125 (333)
108 1fl2_A Alkyl hydroperoxide red 99.1 2.5E-10 8.6E-15 115.8 10.3 115 107-286 1-116 (310)
109 3cty_A Thioredoxin reductase; 99.1 3.6E-10 1.2E-14 115.3 11.4 115 104-286 13-127 (319)
110 1v59_A Dihydrolipoamide dehydr 99.1 1.6E-10 5.5E-15 125.1 9.1 148 106-285 4-157 (478)
111 1ojt_A Surface protein; redox- 99.1 3.6E-11 1.2E-15 130.4 3.1 154 105-286 4-161 (482)
112 2a87_A TRXR, TR, thioredoxin r 99.1 5.9E-10 2E-14 114.6 12.1 115 105-286 12-127 (335)
113 3l8k_A Dihydrolipoyl dehydroge 99.1 1.5E-10 5.1E-15 124.9 7.4 133 106-286 3-145 (466)
114 3s5w_A L-ornithine 5-monooxyge 99.0 1.3E-10 4.3E-15 125.3 6.6 152 106-286 29-193 (463)
115 1dxl_A Dihydrolipoamide dehydr 99.0 6.1E-10 2.1E-14 120.2 11.8 149 106-287 5-153 (470)
116 2a8x_A Dihydrolipoyl dehydroge 99.0 9.3E-11 3.2E-15 126.5 5.2 145 107-286 3-147 (464)
117 1ebd_A E3BD, dihydrolipoamide 99.0 1.6E-10 5.4E-15 124.3 6.2 139 106-286 2-146 (455)
118 1trb_A Thioredoxin reductase; 99.0 6.4E-10 2.2E-14 113.3 10.1 114 106-286 4-117 (320)
119 3dgz_A Thioredoxin reductase 2 99.0 1.5E-10 5E-15 125.8 4.5 53 105-163 4-64 (488)
120 1hyu_A AHPF, alkyl hydroperoxi 99.0 9E-10 3.1E-14 120.5 10.8 117 105-286 210-327 (521)
121 3lad_A Dihydrolipoamide dehydr 99.0 1.9E-10 6.4E-15 124.5 5.1 148 106-286 2-155 (476)
122 1zmd_A Dihydrolipoyl dehydroge 99.0 1.1E-09 3.7E-14 118.4 10.8 145 106-286 5-153 (474)
123 2qae_A Lipoamide, dihydrolipoy 99.0 9.9E-10 3.4E-14 118.5 10.4 146 106-286 1-149 (468)
124 3lov_A Protoporphyrinogen oxid 99.0 6.2E-08 2.1E-12 104.4 24.5 40 107-152 4-45 (475)
125 3dk9_A Grase, GR, glutathione 99.0 2.2E-10 7.6E-15 124.0 4.7 143 106-286 19-161 (478)
126 3qfa_A Thioredoxin reductase 1 99.0 6.6E-10 2.2E-14 121.5 8.4 52 106-163 31-90 (519)
127 3nks_A Protoporphyrinogen oxid 99.0 3.5E-09 1.2E-13 114.2 13.9 55 213-284 235-289 (477)
128 3o0h_A Glutathione reductase; 99.0 1.7E-10 5.8E-15 125.1 3.5 139 107-286 26-167 (484)
129 2yqu_A 2-oxoglutarate dehydrog 99.0 1.8E-10 6.2E-15 123.9 3.5 142 107-286 1-142 (455)
130 4dna_A Probable glutathione re 99.0 1.4E-10 4.8E-15 125.1 2.6 143 106-286 4-146 (463)
131 2hqm_A GR, grase, glutathione 99.0 7.7E-10 2.6E-14 119.8 8.1 51 106-163 10-60 (479)
132 2bcg_G Secretory pathway GDP d 98.9 9.1E-09 3.1E-13 110.5 16.2 59 212-286 242-301 (453)
133 1xdi_A RV3303C-LPDA; reductase 98.9 2.2E-09 7.4E-14 116.9 11.0 154 106-286 1-157 (499)
134 4gde_A UDP-galactopyranose mut 98.9 1.3E-09 4.5E-14 118.6 9.0 48 101-153 4-51 (513)
135 4b63_A L-ornithine N5 monooxyg 98.9 1.3E-09 4.4E-14 118.6 8.8 158 106-284 38-213 (501)
136 3r9u_A Thioredoxin reductase; 98.9 6.1E-09 2.1E-13 105.5 13.1 114 107-285 4-118 (315)
137 2r9z_A Glutathione amide reduc 98.9 3.8E-10 1.3E-14 121.7 3.8 51 106-163 3-53 (463)
138 1lvl_A Dihydrolipoamide dehydr 98.9 5.4E-09 1.8E-13 112.5 12.6 51 106-163 4-54 (458)
139 1zk7_A HGII, reductase, mercur 98.9 1.7E-09 5.8E-14 116.7 8.2 52 106-164 3-54 (467)
140 1fec_A Trypanothione reductase 98.9 8.5E-10 2.9E-14 119.8 5.3 51 107-163 3-62 (490)
141 2eq6_A Pyruvate dehydrogenase 98.9 4.7E-09 1.6E-13 113.1 10.9 50 107-163 6-55 (464)
142 3ic9_A Dihydrolipoamide dehydr 98.9 4.1E-09 1.4E-13 114.4 10.3 52 107-165 8-59 (492)
143 1ges_A Glutathione reductase; 98.9 7.2E-10 2.5E-14 119.0 4.2 51 106-163 3-53 (450)
144 3dgh_A TRXR-1, thioredoxin red 98.9 2.3E-09 8E-14 116.1 7.9 52 106-163 8-68 (483)
145 3p1w_A Rabgdi protein; GDI RAB 98.9 1.5E-08 5.2E-13 108.5 13.5 58 212-284 256-313 (475)
146 1onf_A GR, grase, glutathione 98.8 6.7E-10 2.3E-14 120.9 2.8 51 106-163 1-51 (500)
147 2wpf_A Trypanothione reductase 98.8 9.8E-09 3.4E-13 111.5 11.0 53 106-164 6-67 (495)
148 1q1r_A Putidaredoxin reductase 98.8 5.3E-09 1.8E-13 111.6 6.9 111 106-286 3-115 (431)
149 3oc4_A Oxidoreductase, pyridin 98.8 1.4E-08 4.8E-13 109.0 10.1 115 107-286 2-116 (452)
150 3klj_A NAD(FAD)-dependent dehy 98.7 1.4E-08 4.8E-13 106.6 8.2 110 106-286 8-117 (385)
151 2bc0_A NADH oxidase; flavoprot 98.7 6.9E-09 2.3E-13 112.6 5.8 114 106-286 34-150 (490)
152 3kd9_A Coenzyme A disulfide re 98.7 3.1E-08 1.1E-12 106.2 9.5 111 107-286 3-115 (449)
153 1rsg_A FMS1 protein; FAD bindi 98.7 1E-07 3.5E-12 104.0 13.2 41 106-152 7-48 (516)
154 1d5t_A Guanine nucleotide diss 98.7 2.5E-07 8.4E-12 98.7 15.6 58 212-286 234-291 (433)
155 2yg5_A Putrescine oxidase; oxi 98.7 1.3E-07 4.5E-12 101.1 13.4 41 106-152 4-44 (453)
156 3sx6_A Sulfide-quinone reducta 98.7 2.9E-08 9.9E-13 106.0 7.8 106 108-286 5-113 (437)
157 3lxd_A FAD-dependent pyridine 98.6 1.8E-08 6.2E-13 106.8 6.1 111 106-286 8-120 (415)
158 3ics_A Coenzyme A-disulfide re 98.6 4.5E-08 1.6E-12 108.6 9.3 119 106-286 35-153 (588)
159 3h28_A Sulfide-quinone reducta 98.6 1.2E-08 4.3E-13 108.6 4.2 109 107-286 2-110 (430)
160 3qvp_A Glucose oxidase; oxidor 98.6 2.6E-07 8.7E-12 101.8 14.7 71 215-298 230-304 (583)
161 2v3a_A Rubredoxin reductase; a 98.6 4.8E-08 1.7E-12 102.4 8.0 109 106-286 3-114 (384)
162 2gqw_A Ferredoxin reductase; f 98.6 6E-08 2.1E-12 102.6 8.6 108 105-286 5-114 (408)
163 1xhc_A NADH oxidase /nitrite r 98.6 3.1E-08 1.1E-12 103.3 6.1 35 107-148 8-42 (367)
164 3k30_A Histamine dehydrogenase 98.6 9.3E-08 3.2E-12 108.1 10.4 44 105-154 389-432 (690)
165 3pl8_A Pyranose 2-oxidase; sub 98.6 1.6E-07 5.5E-12 104.6 12.1 40 105-150 44-83 (623)
166 2gag_A Heterotetrameric sarcos 98.6 1E-07 3.5E-12 111.5 10.8 123 106-285 127-253 (965)
167 3q9t_A Choline dehydrogenase a 98.6 5.1E-08 1.7E-12 107.4 7.6 52 224-286 218-271 (577)
168 3iwa_A FAD-dependent pyridine 98.6 9E-08 3.1E-12 103.2 9.2 124 107-286 3-126 (472)
169 3fg2_P Putative rubredoxin red 98.6 4.8E-07 1.6E-11 95.5 14.6 111 107-298 142-252 (404)
170 3ef6_A Toluene 1,2-dioxygenase 98.6 2.7E-08 9.4E-13 105.3 4.7 109 107-286 2-112 (410)
171 2x8g_A Thioredoxin glutathione 98.6 1.7E-07 5.9E-12 104.1 11.4 53 105-163 105-165 (598)
172 2vdc_G Glutamate synthase [NAD 98.6 5.4E-08 1.8E-12 104.4 6.9 39 106-150 121-159 (456)
173 3lxd_A FAD-dependent pyridine 98.6 6.8E-07 2.3E-11 94.6 15.3 111 107-298 152-262 (415)
174 2cdu_A NADPH oxidase; flavoenz 98.6 6.9E-08 2.3E-12 103.6 7.4 118 108-286 1-118 (452)
175 3hyw_A Sulfide-quinone reducta 98.5 3.2E-08 1.1E-12 105.5 4.5 108 107-285 2-109 (430)
176 2v3a_A Rubredoxin reductase; a 98.5 5.5E-07 1.9E-11 94.3 13.9 110 107-298 145-254 (384)
177 1nhp_A NADH peroxidase; oxidor 98.5 6.7E-08 2.3E-12 103.5 6.7 38 108-149 1-38 (447)
178 3cgb_A Pyridine nucleotide-dis 98.5 1E-07 3.5E-12 103.0 8.1 38 108-149 37-74 (480)
179 3h8l_A NADH oxidase; membrane 98.5 3.6E-08 1.2E-12 104.3 4.0 110 108-286 2-114 (409)
180 1q1r_A Putidaredoxin reductase 98.5 9.4E-07 3.2E-11 94.1 14.4 112 107-298 149-261 (431)
181 3ntd_A FAD-dependent pyridine 98.5 1.7E-07 5.8E-12 103.4 8.4 117 108-286 2-118 (565)
182 1ges_A Glutathione reductase; 98.5 7.2E-07 2.4E-11 95.6 12.8 101 107-287 167-267 (450)
183 4eqs_A Coenzyme A disulfide re 98.5 9.4E-08 3.2E-12 102.1 5.7 116 109-286 2-117 (437)
184 3fg2_P Putative rubredoxin red 98.5 9.7E-08 3.3E-12 100.8 5.6 107 108-285 2-110 (404)
185 4gut_A Lysine-specific histone 98.5 6.8E-07 2.3E-11 101.7 13.0 40 106-151 335-374 (776)
186 2yqu_A 2-oxoglutarate dehydrog 98.5 7.7E-07 2.6E-11 95.4 12.6 100 107-287 167-266 (455)
187 1y56_A Hypothetical protein PH 98.4 2.3E-07 8E-12 100.6 8.0 115 105-286 106-220 (493)
188 2hqm_A GR, grase, glutathione 98.4 1E-06 3.5E-11 95.1 12.6 102 107-287 185-287 (479)
189 1nhp_A NADH peroxidase; oxidor 98.4 7.8E-07 2.7E-11 95.1 11.1 101 106-287 148-248 (447)
190 3ef6_A Toluene 1,2-dioxygenase 98.4 1.1E-06 3.7E-11 92.9 11.8 110 107-298 143-252 (410)
191 1v59_A Dihydrolipoamide dehydr 98.4 1.8E-06 6E-11 93.2 13.1 107 107-287 183-289 (478)
192 2r9z_A Glutathione amide reduc 98.4 1.6E-06 5.4E-11 93.3 12.6 99 108-287 167-266 (463)
193 1m6i_A Programmed cell death p 98.4 2.3E-07 8E-12 100.6 5.8 41 105-149 9-49 (493)
194 2gqw_A Ferredoxin reductase; f 98.4 2.9E-06 9.9E-11 89.6 13.6 106 107-298 145-250 (408)
195 1onf_A GR, grase, glutathione 98.4 3.2E-06 1.1E-10 91.7 14.3 101 107-287 176-277 (500)
196 2eq6_A Pyruvate dehydrogenase 98.3 2.3E-06 7.9E-11 91.9 12.6 105 107-287 169-273 (464)
197 3vrd_B FCCB subunit, flavocyto 98.3 5.6E-07 1.9E-11 94.7 7.6 35 109-147 4-38 (401)
198 1ps9_A 2,4-dienoyl-COA reducta 98.3 4.3E-07 1.5E-11 102.3 6.8 40 106-151 372-411 (671)
199 1cjc_A Protein (adrenodoxin re 98.3 2.1E-07 7.3E-12 99.9 3.9 38 107-150 6-45 (460)
200 3fim_B ARYL-alcohol oxidase; A 98.3 2.8E-07 9.6E-12 101.3 4.9 71 215-298 211-287 (566)
201 3oc4_A Oxidoreductase, pyridin 98.3 5.5E-06 1.9E-10 88.7 14.9 100 107-287 147-246 (452)
202 1ebd_A E3BD, dihydrolipoamide 98.3 3.2E-06 1.1E-10 90.6 12.7 103 107-287 170-272 (455)
203 1gte_A Dihydropyrimidine dehyd 98.3 3.2E-07 1.1E-11 108.1 5.1 99 107-284 187-286 (1025)
204 2cdu_A NADPH oxidase; flavoenz 98.3 3.1E-06 1.1E-10 90.6 12.4 101 107-287 149-249 (452)
205 1trb_A Thioredoxin reductase; 98.3 4.4E-06 1.5E-10 84.5 12.8 103 107-286 145-248 (320)
206 3cgb_A Pyridine nucleotide-dis 98.3 3.1E-06 1.1E-10 91.3 11.9 98 107-286 186-283 (480)
207 1xhc_A NADH oxidase /nitrite r 98.3 4.1E-06 1.4E-10 87.1 11.8 102 108-298 144-245 (367)
208 1xdi_A RV3303C-LPDA; reductase 98.2 5.9E-06 2E-10 89.6 13.3 100 107-287 182-281 (499)
209 1zmd_A Dihydrolipoyl dehydroge 98.2 6.1E-06 2.1E-10 88.9 13.4 107 107-287 178-284 (474)
210 1lqt_A FPRA; NADP+ derivative, 98.2 2.7E-07 9.2E-12 99.0 2.5 44 107-150 3-47 (456)
211 3ntd_A FAD-dependent pyridine 98.2 8.1E-06 2.8E-10 89.9 14.1 109 108-298 152-278 (565)
212 2bc0_A NADH oxidase; flavoprot 98.2 4E-06 1.4E-10 90.7 11.4 100 107-287 194-293 (490)
213 1m6i_A Programmed cell death p 98.2 7.3E-06 2.5E-10 88.8 13.3 114 107-298 180-293 (493)
214 1lvl_A Dihydrolipoamide dehydr 98.2 3.7E-06 1.3E-10 90.2 10.6 100 107-287 171-270 (458)
215 3t37_A Probable dehydrogenase; 98.2 1.2E-06 4.1E-11 95.6 6.6 66 217-297 215-281 (526)
216 3o0h_A Glutathione reductase; 98.2 8E-06 2.7E-10 88.2 12.8 100 107-287 191-290 (484)
217 1zk7_A HGII, reductase, mercur 98.2 6.8E-06 2.3E-10 88.3 12.1 98 107-287 176-273 (467)
218 2qae_A Lipoamide, dihydrolipoy 98.2 1.1E-05 3.6E-10 86.8 13.4 104 107-287 174-278 (468)
219 1o94_A Tmadh, trimethylamine d 98.2 1.1E-06 3.6E-11 100.0 5.7 40 106-151 388-427 (729)
220 4dna_A Probable glutathione re 98.2 9.4E-06 3.2E-10 87.1 12.9 99 107-286 170-269 (463)
221 2jbv_A Choline oxidase; alcoho 98.2 7.6E-06 2.6E-10 89.7 12.4 62 224-297 221-283 (546)
222 3iwa_A FAD-dependent pyridine 98.2 1.4E-05 4.8E-10 86.0 14.2 111 107-298 159-269 (472)
223 2wpf_A Trypanothione reductase 98.2 1.1E-05 3.8E-10 87.4 13.4 104 107-287 191-294 (495)
224 2a8x_A Dihydrolipoyl dehydroge 98.2 1.1E-05 3.6E-10 86.7 13.0 103 107-287 171-273 (464)
225 1fec_A Trypanothione reductase 98.2 1.1E-05 3.8E-10 87.3 13.1 103 107-286 187-289 (490)
226 1v0j_A UDP-galactopyranose mut 98.2 1.7E-06 5.7E-11 91.2 6.2 43 106-153 6-48 (399)
227 2b9w_A Putative aminooxidase; 98.1 1.7E-06 5.9E-11 91.5 6.0 41 106-152 5-46 (424)
228 3urh_A Dihydrolipoyl dehydroge 98.1 1.7E-05 5.9E-10 85.7 13.8 105 107-287 198-302 (491)
229 1dxl_A Dihydrolipoamide dehydr 98.1 7.9E-06 2.7E-10 87.8 11.0 105 107-287 177-281 (470)
230 3dk9_A Grase, GR, glutathione 98.1 1.9E-05 6.5E-10 85.0 13.8 108 107-286 187-294 (478)
231 4b1b_A TRXR, thioredoxin reduc 98.1 1.5E-05 5.2E-10 87.0 13.0 101 106-288 222-322 (542)
232 3hdq_A UDP-galactopyranose mut 98.1 2.1E-06 7.2E-11 90.0 6.0 43 105-153 27-69 (397)
233 3ics_A Coenzyme A-disulfide re 98.1 1.7E-05 5.8E-10 87.8 13.4 107 107-298 187-293 (588)
234 2e1m_A L-glutamate oxidase; L- 98.1 2.3E-06 8E-11 88.9 5.5 42 105-152 42-84 (376)
235 3lad_A Dihydrolipoamide dehydr 98.1 2E-05 6.9E-10 84.8 12.9 103 107-287 180-282 (476)
236 3ic9_A Dihydrolipoamide dehydr 98.1 2.7E-05 9.2E-10 84.3 13.8 103 107-287 174-276 (492)
237 2jae_A L-amino acid oxidase; o 98.1 2.8E-06 9.5E-11 91.8 5.9 41 106-152 10-50 (489)
238 1ojt_A Surface protein; redox- 98.1 1E-05 3.5E-10 87.3 10.4 104 107-287 185-288 (482)
239 3ab1_A Ferredoxin--NADP reduct 98.1 1.3E-05 4.3E-10 82.8 10.5 102 107-286 163-264 (360)
240 2zbw_A Thioredoxin reductase; 98.0 2.8E-05 9.7E-10 79.1 12.8 102 107-286 152-253 (335)
241 1i8t_A UDP-galactopyranose mut 98.0 2.9E-06 1E-10 88.3 5.2 41 107-153 1-41 (367)
242 3dgh_A TRXR-1, thioredoxin red 98.0 2.2E-05 7.6E-10 84.7 12.0 103 108-286 188-290 (483)
243 3cty_A Thioredoxin reductase; 98.0 1.6E-05 5.5E-10 80.5 10.2 99 107-286 155-253 (319)
244 1fl2_A Alkyl hydroperoxide red 98.0 3.1E-05 1.1E-09 77.9 12.2 98 107-285 144-242 (310)
245 1gpe_A Protein (glucose oxidas 98.0 7.4E-06 2.5E-10 90.6 8.1 68 217-297 236-307 (587)
246 4g6h_A Rotenone-insensitive NA 98.0 8.7E-06 3E-10 88.3 8.3 36 106-147 41-76 (502)
247 3dgz_A Thioredoxin reductase 2 98.0 3.5E-05 1.2E-09 83.2 13.1 105 107-287 185-289 (488)
248 4eqs_A Coenzyme A disulfide re 98.0 1.2E-05 3.9E-10 85.8 9.1 95 107-286 147-241 (437)
249 1sez_A Protoporphyrinogen oxid 98.0 4.4E-06 1.5E-10 90.5 5.4 41 106-152 12-52 (504)
250 3itj_A Thioredoxin reductase 1 98.0 3.5E-05 1.2E-09 78.3 11.7 98 107-285 173-271 (338)
251 3kd9_A Coenzyme A disulfide re 98.0 3.8E-05 1.3E-09 81.9 12.2 107 108-298 149-255 (449)
252 4g6h_A Rotenone-insensitive NA 97.9 2.7E-05 9.3E-10 84.4 10.7 108 108-286 218-333 (502)
253 2bi7_A UDP-galactopyranose mut 97.9 8.5E-06 2.9E-10 85.3 5.4 40 107-152 3-42 (384)
254 4dsg_A UDP-galactopyranose mut 97.9 9.9E-06 3.4E-10 87.5 5.8 42 106-153 8-50 (484)
255 2iid_A L-amino-acid oxidase; f 97.9 9.6E-06 3.3E-10 87.8 5.6 42 105-152 31-72 (498)
256 2q0l_A TRXR, thioredoxin reduc 97.8 6.8E-05 2.3E-09 75.4 11.0 99 107-286 143-242 (311)
257 3f8d_A Thioredoxin reductase ( 97.8 0.00014 4.9E-09 73.1 13.2 108 107-298 154-262 (323)
258 1vdc_A NTR, NADPH dependent th 97.8 6.8E-05 2.3E-09 76.2 10.3 101 107-286 159-260 (333)
259 2q7v_A Thioredoxin reductase; 97.8 8.6E-05 2.9E-09 75.3 10.9 98 107-286 152-250 (325)
260 3qfa_A Thioredoxin reductase 1 97.8 0.00013 4.5E-09 79.4 12.8 103 108-286 211-316 (519)
261 3d1c_A Flavin-containing putat 97.8 0.0001 3.5E-09 76.0 11.4 105 108-286 167-273 (369)
262 3r9u_A Thioredoxin reductase; 97.8 0.00012 4.1E-09 73.4 11.6 98 107-285 147-244 (315)
263 3s5w_A L-ornithine 5-monooxyge 97.8 0.00016 5.6E-09 77.2 12.9 38 107-148 227-264 (463)
264 1hyu_A AHPF, alkyl hydroperoxi 97.7 0.00012 4.3E-09 79.6 12.0 98 107-285 355-453 (521)
265 2x8g_A Thioredoxin glutathione 97.7 0.00024 8.1E-09 78.7 13.6 102 108-286 287-396 (598)
266 1b37_A Protein (polyamine oxid 97.7 2.5E-05 8.6E-10 83.9 5.2 41 106-152 3-44 (472)
267 3g5s_A Methylenetetrahydrofola 97.7 4.1E-05 1.4E-09 79.0 6.3 36 108-149 2-37 (443)
268 3klj_A NAD(FAD)-dependent dehy 97.6 2.7E-05 9.3E-10 81.4 4.6 86 108-286 147-232 (385)
269 3lzw_A Ferredoxin--NADP reduct 97.6 0.00015 5.2E-09 73.3 10.0 98 107-286 154-251 (332)
270 1cjc_A Protein (adrenodoxin re 97.6 0.00028 9.6E-09 75.5 12.1 149 107-286 145-334 (460)
271 3l8k_A Dihydrolipoyl dehydroge 97.6 0.00018 6.3E-09 77.0 10.6 104 107-288 172-275 (466)
272 1gte_A Dihydropyrimidine dehyd 97.5 0.00029 1E-08 82.9 12.0 110 108-286 333-443 (1025)
273 2a87_A TRXR, TR, thioredoxin r 97.5 0.00012 4.2E-09 74.5 7.0 98 107-285 155-252 (335)
274 2z3y_A Lysine-specific histone 97.5 6.8E-05 2.3E-09 84.1 5.4 40 106-151 106-145 (662)
275 1kdg_A CDH, cellobiose dehydro 97.5 7.2E-05 2.5E-09 82.0 5.2 68 218-298 201-272 (546)
276 2vdc_G Glutamate synthase [NAD 97.5 0.00013 4.4E-09 78.0 6.9 110 107-286 264-379 (456)
277 3fbs_A Oxidoreductase; structu 97.4 0.00017 5.7E-09 71.7 7.0 87 107-286 141-227 (297)
278 2xag_A Lysine-specific histone 97.4 9.9E-05 3.4E-09 84.6 5.8 40 106-151 277-316 (852)
279 2gag_A Heterotetrameric sarcos 97.3 0.00037 1.3E-08 81.4 8.9 98 108-287 285-385 (965)
280 4a5l_A Thioredoxin reductase; 97.3 0.0013 4.3E-08 66.0 11.1 100 107-286 152-251 (314)
281 1ju2_A HydroxynitrIle lyase; f 97.2 0.00014 4.8E-09 79.4 3.3 66 219-297 201-271 (536)
282 1lqt_A FPRA; NADP+ derivative, 97.2 0.00066 2.3E-08 72.5 8.3 70 213-285 247-326 (456)
283 1n4w_A CHOD, cholesterol oxida 97.1 0.00033 1.1E-08 75.9 5.3 61 218-286 227-289 (504)
284 3ayj_A Pro-enzyme of L-phenyla 97.1 0.00021 7.3E-09 79.8 3.6 36 107-148 56-100 (721)
285 1coy_A Cholesterol oxidase; ox 97.0 0.00043 1.5E-08 75.0 5.2 61 218-286 232-294 (507)
286 1vg0_A RAB proteins geranylger 97.0 0.00063 2.2E-08 75.1 6.2 43 104-152 5-47 (650)
287 3uox_A Otemo; baeyer-villiger 97.0 0.002 6.7E-08 70.4 10.1 35 107-147 185-219 (545)
288 3gwf_A Cyclohexanone monooxyge 97.0 0.0027 9.1E-08 69.3 10.7 35 107-147 178-212 (540)
289 4gcm_A TRXR, thioredoxin reduc 96.9 0.0082 2.8E-07 60.1 13.5 35 108-148 146-180 (312)
290 3h8l_A NADH oxidase; membrane 96.8 0.0032 1.1E-07 65.9 9.9 53 213-286 219-271 (409)
291 2xve_A Flavin-containing monoo 96.7 0.0037 1.3E-07 66.8 9.2 35 107-147 197-231 (464)
292 1o94_A Tmadh, trimethylamine d 96.7 0.0024 8.3E-08 72.3 8.2 34 107-146 528-563 (729)
293 4ap3_A Steroid monooxygenase; 96.7 0.007 2.4E-07 66.1 11.1 35 107-147 191-225 (549)
294 2gv8_A Monooxygenase; FMO, FAD 96.6 0.0022 7.6E-08 68.1 6.4 34 107-146 212-246 (447)
295 1ps9_A 2,4-dienoyl-COA reducta 96.6 0.0032 1.1E-07 70.6 7.8 53 216-286 577-629 (671)
296 3h28_A Sulfide-quinone reducta 96.5 0.0042 1.4E-07 65.6 8.1 56 214-286 202-257 (430)
297 4fk1_A Putative thioredoxin re 96.4 0.0041 1.4E-07 62.2 6.9 91 107-286 146-237 (304)
298 4a9w_A Monooxygenase; baeyer-v 96.3 0.0056 1.9E-07 62.1 6.9 33 107-146 163-195 (357)
299 3sx6_A Sulfide-quinone reducta 96.2 0.0095 3.3E-07 63.0 8.5 60 215-286 211-270 (437)
300 4b63_A L-ornithine N5 monooxyg 95.5 0.042 1.4E-06 59.2 9.8 37 107-147 246-282 (501)
301 2g1u_A Hypothetical protein TM 94.6 0.03 1E-06 49.9 4.7 35 107-147 19-53 (155)
302 3fwz_A Inner membrane protein 94.3 0.05 1.7E-06 47.5 5.4 37 105-147 5-41 (140)
303 3hyw_A Sulfide-quinone reducta 94.1 0.14 4.7E-06 53.9 9.3 56 214-286 202-257 (430)
304 3vrd_B FCCB subunit, flavocyto 94.1 0.079 2.7E-06 54.9 7.2 54 216-286 206-259 (401)
305 1w4x_A Phenylacetone monooxyge 93.8 0.21 7.2E-06 54.2 10.3 35 107-147 186-220 (542)
306 1id1_A Putative potassium chan 93.6 0.15 5.2E-06 45.0 7.3 33 108-146 4-36 (153)
307 1lss_A TRK system potassium up 93.3 0.082 2.8E-06 45.5 4.8 33 108-146 5-37 (140)
308 3ic5_A Putative saccharopine d 93.2 0.083 2.8E-06 44.0 4.5 34 107-146 5-39 (118)
309 3llv_A Exopolyphosphatase-rela 92.9 0.1 3.6E-06 45.3 4.9 33 108-146 7-39 (141)
310 1vg0_A RAB proteins geranylger 92.5 0.26 8.8E-06 54.4 8.3 57 211-282 377-434 (650)
311 2hmt_A YUAA protein; RCK, KTN, 91.4 0.16 5.6E-06 43.7 4.3 32 109-146 8-39 (144)
312 4dio_A NAD(P) transhydrogenase 91.2 0.19 6.4E-06 52.1 5.1 35 107-147 190-224 (405)
313 3i83_A 2-dehydropantoate 2-red 90.6 0.23 7.7E-06 49.9 5.0 34 107-146 2-35 (320)
314 3p2y_A Alanine dehydrogenase/p 90.2 0.23 7.9E-06 51.0 4.7 34 107-146 184-217 (381)
315 3l4b_C TRKA K+ channel protien 90.0 0.23 7.9E-06 46.7 4.3 32 109-146 2-33 (218)
316 1sez_A Protoporphyrinogen oxid 89.8 1.8 6.2E-05 45.9 11.6 36 414-455 460-495 (504)
317 1lld_A L-lactate dehydrogenase 89.7 0.29 9.9E-06 49.0 5.0 34 107-146 7-42 (319)
318 3dfz_A SIRC, precorrin-2 dehyd 89.6 0.3 1E-05 46.4 4.6 33 107-145 31-63 (223)
319 3hn2_A 2-dehydropantoate 2-red 89.5 0.27 9.2E-06 49.2 4.6 34 107-146 2-35 (312)
320 4g65_A TRK system potassium up 89.1 0.21 7.3E-06 52.9 3.6 52 108-165 4-63 (461)
321 1pzg_A LDH, lactate dehydrogen 88.9 0.44 1.5E-05 48.2 5.6 34 107-146 9-43 (331)
322 1l7d_A Nicotinamide nucleotide 88.8 0.37 1.3E-05 49.8 5.1 35 107-147 172-206 (384)
323 1f0y_A HCDH, L-3-hydroxyacyl-C 88.8 0.41 1.4E-05 47.5 5.3 32 109-146 17-48 (302)
324 1x13_A NAD(P) transhydrogenase 88.7 0.34 1.1E-05 50.4 4.7 34 107-146 172-205 (401)
325 3g17_A Similar to 2-dehydropan 88.7 0.34 1.2E-05 47.9 4.6 34 107-146 2-35 (294)
326 2ewd_A Lactate dehydrogenase,; 88.7 0.45 1.5E-05 47.7 5.5 33 108-146 5-38 (317)
327 1mo9_A ORF3; nucleotide bindin 88.6 0.38 1.3E-05 51.9 5.2 35 108-148 215-249 (523)
328 1n4w_A CHOD, cholesterol oxida 88.6 0.45 1.5E-05 51.1 5.8 37 106-148 4-40 (504)
329 3gg2_A Sugar dehydrogenase, UD 88.5 0.38 1.3E-05 50.8 5.0 33 108-146 3-35 (450)
330 3ado_A Lambda-crystallin; L-gu 88.5 0.4 1.4E-05 48.1 4.9 33 108-146 7-39 (319)
331 2a9f_A Putative malic enzyme ( 88.1 0.45 1.6E-05 48.8 5.0 35 106-146 187-222 (398)
332 1kyq_A Met8P, siroheme biosynt 88.0 0.25 8.6E-06 48.4 2.9 34 107-146 13-46 (274)
333 2x5o_A UDP-N-acetylmuramoylala 87.9 0.28 9.4E-06 51.7 3.5 34 108-147 6-39 (439)
334 3lk7_A UDP-N-acetylmuramoylala 87.8 0.36 1.2E-05 51.0 4.3 33 108-146 10-42 (451)
335 2z3y_A Lysine-specific histone 87.6 6.7 0.00023 43.4 14.7 36 415-453 623-658 (662)
336 3l9w_A Glutathione-regulated p 87.6 0.57 2E-05 48.9 5.6 34 108-147 5-38 (413)
337 1pjc_A Protein (L-alanine dehy 87.5 0.46 1.6E-05 48.6 4.8 33 108-146 168-200 (361)
338 1jw9_B Molybdopterin biosynthe 87.5 0.52 1.8E-05 45.5 4.9 34 107-146 31-65 (249)
339 2hjr_A Malate dehydrogenase; m 87.5 0.56 1.9E-05 47.3 5.3 34 107-146 14-48 (328)
340 4e12_A Diketoreductase; oxidor 87.4 0.57 2E-05 46.0 5.2 33 108-146 5-37 (283)
341 1ks9_A KPA reductase;, 2-dehyd 87.0 0.6 2.1E-05 45.6 5.2 33 109-147 2-34 (291)
342 1ur5_A Malate dehydrogenase; o 86.8 0.62 2.1E-05 46.5 5.2 33 108-146 3-36 (309)
343 1y56_A Hypothetical protein PH 86.7 0.75 2.6E-05 49.1 6.1 60 220-298 265-324 (493)
344 3ego_A Probable 2-dehydropanto 86.7 0.59 2E-05 46.6 4.9 33 107-146 2-34 (307)
345 2ew2_A 2-dehydropantoate 2-red 86.6 0.6 2E-05 46.2 4.9 33 108-146 4-36 (316)
346 1coy_A Cholesterol oxidase; ox 86.4 0.71 2.4E-05 49.5 5.7 36 106-147 10-45 (507)
347 2raf_A Putative dinucleotide-b 86.4 0.74 2.5E-05 43.0 5.2 35 107-147 19-53 (209)
348 3g0o_A 3-hydroxyisobutyrate de 86.3 0.65 2.2E-05 46.1 5.0 34 107-146 7-40 (303)
349 2y0c_A BCEC, UDP-glucose dehyd 86.2 0.61 2.1E-05 49.6 5.0 34 107-146 8-41 (478)
350 3c85_A Putative glutathione-re 86.2 0.75 2.6E-05 41.7 5.0 35 107-146 39-73 (183)
351 1z82_A Glycerol-3-phosphate de 86.1 0.65 2.2E-05 46.8 5.0 36 105-146 12-47 (335)
352 1y6j_A L-lactate dehydrogenase 85.9 0.73 2.5E-05 46.2 5.1 34 107-146 7-42 (318)
353 1vl6_A Malate oxidoreductase; 85.7 0.73 2.5E-05 47.2 5.0 34 106-145 191-225 (388)
354 1t2d_A LDH-P, L-lactate dehydr 85.7 0.82 2.8E-05 45.9 5.4 33 108-146 5-38 (322)
355 2eez_A Alanine dehydrogenase; 85.5 0.68 2.3E-05 47.5 4.8 34 107-146 166-199 (369)
356 1bg6_A N-(1-D-carboxylethyl)-L 85.5 0.73 2.5E-05 46.6 5.0 33 108-146 5-37 (359)
357 2vhw_A Alanine dehydrogenase; 85.1 0.73 2.5E-05 47.4 4.8 34 107-146 168-201 (377)
358 3vtf_A UDP-glucose 6-dehydroge 85.1 0.88 3E-05 47.7 5.4 35 107-147 21-55 (444)
359 3ghy_A Ketopantoate reductase 85.0 0.82 2.8E-05 46.1 5.1 32 108-145 4-35 (335)
360 2v6b_A L-LDH, L-lactate dehydr 85.0 0.8 2.7E-05 45.6 4.9 32 109-146 2-35 (304)
361 3oj0_A Glutr, glutamyl-tRNA re 85.0 0.32 1.1E-05 42.4 1.7 34 107-146 21-54 (144)
362 3qha_A Putative oxidoreductase 84.8 0.62 2.1E-05 46.1 4.0 36 106-147 14-49 (296)
363 2dpo_A L-gulonate 3-dehydrogen 84.5 0.87 3E-05 45.7 4.9 33 108-146 7-39 (319)
364 4a7p_A UDP-glucose dehydrogena 84.5 0.91 3.1E-05 47.8 5.2 35 107-147 8-42 (446)
365 1b37_A Protein (polyamine oxid 84.4 0.91 3.1E-05 48.0 5.3 55 212-283 206-268 (472)
366 3l6d_A Putative oxidoreductase 84.0 1.1 3.8E-05 44.5 5.5 35 106-146 8-42 (306)
367 1guz_A Malate dehydrogenase; o 83.9 0.97 3.3E-05 45.1 5.0 34 109-146 2-35 (310)
368 1nyt_A Shikimate 5-dehydrogena 83.6 1 3.5E-05 43.9 4.9 33 108-146 120-152 (271)
369 1evy_A Glycerol-3-phosphate de 83.5 0.68 2.3E-05 47.3 3.7 32 109-146 17-48 (366)
370 3k96_A Glycerol-3-phosphate de 83.2 1.1 3.8E-05 45.7 5.1 34 107-146 29-62 (356)
371 3pid_A UDP-glucose 6-dehydroge 83.2 1 3.5E-05 47.1 4.9 37 104-147 33-69 (432)
372 3phh_A Shikimate dehydrogenase 83.0 1.2 4.2E-05 43.4 5.1 35 107-147 118-152 (269)
373 3eag_A UDP-N-acetylmuramate:L- 82.9 0.99 3.4E-05 45.3 4.6 34 108-147 5-39 (326)
374 2aef_A Calcium-gated potassium 82.8 0.74 2.5E-05 43.7 3.4 34 107-147 9-42 (234)
375 3ond_A Adenosylhomocysteinase; 82.8 1.1 3.7E-05 47.5 4.9 34 107-146 265-298 (488)
376 1vpd_A Tartronate semialdehyde 82.5 1 3.4E-05 44.4 4.4 34 107-146 5-38 (299)
377 4ffl_A PYLC; amino acid, biosy 82.3 1.2 4.1E-05 45.3 5.0 33 109-147 3-35 (363)
378 1mv8_A GMD, GDP-mannose 6-dehy 82.3 0.96 3.3E-05 47.5 4.4 32 109-146 2-33 (436)
379 3doj_A AT3G25530, dehydrogenas 82.3 1.2 4E-05 44.4 4.9 34 108-147 22-55 (310)
380 4ezb_A Uncharacterized conserv 81.8 1.1 3.9E-05 44.7 4.5 35 106-146 23-58 (317)
381 3k6j_A Protein F01G10.3, confi 81.7 1.2 4.2E-05 46.9 4.9 34 108-147 55-88 (460)
382 3gvi_A Malate dehydrogenase; N 81.5 1.5 5.2E-05 44.0 5.3 34 108-147 8-42 (324)
383 1zcj_A Peroxisomal bifunctiona 81.4 1.2 3.9E-05 47.3 4.6 32 109-146 39-70 (463)
384 2xag_A Lysine-specific histone 81.3 17 0.00058 41.4 14.5 38 415-455 794-831 (852)
385 3d1l_A Putative NADP oxidoredu 81.3 1.6 5.4E-05 42.1 5.3 33 108-146 11-44 (266)
386 1a5z_A L-lactate dehydrogenase 81.2 1.4 4.8E-05 44.1 4.9 32 109-146 2-35 (319)
387 1oju_A MDH, malate dehydrogena 81.2 1.4 4.9E-05 43.5 4.9 32 109-146 2-35 (294)
388 1txg_A Glycerol-3-phosphate de 81.1 1.3 4.6E-05 44.2 4.9 30 109-144 2-31 (335)
389 3pef_A 6-phosphogluconate dehy 81.1 1.3 4.4E-05 43.5 4.6 33 109-147 3-35 (287)
390 2egg_A AROE, shikimate 5-dehyd 81.1 1.3 4.5E-05 43.8 4.7 33 108-146 142-175 (297)
391 3hwr_A 2-dehydropantoate 2-red 81.1 1.3 4.6E-05 44.1 4.8 33 107-146 19-51 (318)
392 1kdg_A CDH, cellobiose dehydro 80.9 1.6 5.4E-05 47.1 5.6 36 106-147 6-41 (546)
393 3gvp_A Adenosylhomocysteinase 80.9 1.2 4.1E-05 46.3 4.3 34 107-146 220-253 (435)
394 3dtt_A NADP oxidoreductase; st 80.8 1.5 5.2E-05 41.9 4.9 35 106-146 18-52 (245)
395 1zej_A HBD-9, 3-hydroxyacyl-CO 80.5 1.6 5.4E-05 43.2 4.9 33 107-146 12-44 (293)
396 3tl2_A Malate dehydrogenase; c 80.4 1.7 5.7E-05 43.5 5.2 32 108-145 9-41 (315)
397 1pjq_A CYSG, siroheme synthase 80.2 1.4 4.7E-05 46.6 4.7 32 108-145 13-44 (457)
398 2r6j_A Eugenol synthase 1; phe 80.2 2.7 9.1E-05 41.5 6.7 36 106-147 10-46 (318)
399 1yj8_A Glycerol-3-phosphate de 80.2 1.5 5.2E-05 44.8 5.0 34 108-147 22-62 (375)
400 3pqe_A L-LDH, L-lactate dehydr 80.2 1.8 6.2E-05 43.4 5.4 32 108-145 6-39 (326)
401 2vns_A Metalloreductase steap3 80.2 1.7 5.8E-05 40.6 4.9 33 108-146 29-61 (215)
402 3nep_X Malate dehydrogenase; h 80.1 1.8 6.1E-05 43.3 5.2 32 109-146 2-35 (314)
403 3c7a_A Octopine dehydrogenase; 79.9 1.1 3.6E-05 46.5 3.7 31 108-144 3-34 (404)
404 3d0o_A L-LDH 1, L-lactate dehy 79.8 1.9 6.4E-05 43.1 5.3 33 107-145 6-40 (317)
405 3ius_A Uncharacterized conserv 79.8 1.4 4.8E-05 42.7 4.4 34 107-146 5-38 (286)
406 2p4q_A 6-phosphogluconate dehy 79.7 1.7 5.9E-05 46.3 5.3 37 105-147 8-44 (497)
407 3d4o_A Dipicolinate synthase s 79.7 1.6 5.5E-05 43.0 4.7 34 107-146 155-188 (293)
408 2uyy_A N-PAC protein; long-cha 79.7 1.7 5.9E-05 43.1 5.1 33 108-146 31-63 (316)
409 3p7m_A Malate dehydrogenase; p 79.6 1.9 6.7E-05 43.1 5.4 33 108-146 6-39 (321)
410 2rir_A Dipicolinate synthase, 79.5 1.6 5.6E-05 43.1 4.7 34 107-146 157-190 (300)
411 3pdu_A 3-hydroxyisobutyrate de 79.3 1.4 4.8E-05 43.2 4.1 33 109-147 3-35 (287)
412 3ce6_A Adenosylhomocysteinase; 79.1 1.7 5.8E-05 46.3 4.9 34 107-146 274-307 (494)
413 3gt0_A Pyrroline-5-carboxylate 79.0 2.2 7.6E-05 40.7 5.4 33 108-146 3-39 (247)
414 3dhn_A NAD-dependent epimerase 78.9 2.3 8E-05 39.5 5.5 55 108-168 5-66 (227)
415 1ez4_A Lactate dehydrogenase; 78.9 2.1 7E-05 42.9 5.3 33 107-145 5-39 (318)
416 2hk9_A Shikimate dehydrogenase 78.8 1.9 6.5E-05 42.1 4.9 33 108-146 130-162 (275)
417 4huj_A Uncharacterized protein 78.8 1.2 4E-05 42.0 3.2 33 108-146 24-57 (220)
418 3ggo_A Prephenate dehydrogenas 78.8 2.1 7.1E-05 42.7 5.3 34 107-146 33-68 (314)
419 4e21_A 6-phosphogluconate dehy 78.7 1.9 6.5E-05 43.9 5.0 34 107-146 22-55 (358)
420 4dll_A 2-hydroxy-3-oxopropiona 78.6 1.7 5.9E-05 43.4 4.6 33 108-146 32-64 (320)
421 1ldn_A L-lactate dehydrogenase 78.4 2.2 7.5E-05 42.6 5.3 34 107-146 6-41 (316)
422 1p77_A Shikimate 5-dehydrogena 78.4 1.4 4.6E-05 43.1 3.7 33 108-146 120-152 (272)
423 3don_A Shikimate dehydrogenase 78.2 1.7 5.7E-05 42.6 4.3 35 107-147 117-152 (277)
424 1jay_A Coenzyme F420H2:NADP+ o 78.1 1.9 6.5E-05 39.9 4.5 32 109-146 2-34 (212)
425 1gpj_A Glutamyl-tRNA reductase 77.9 2 6.8E-05 44.6 5.0 34 107-146 167-201 (404)
426 2pv7_A T-protein [includes: ch 77.9 2.2 7.4E-05 42.1 5.1 33 108-146 22-55 (298)
427 3u62_A Shikimate dehydrogenase 77.8 2.2 7.4E-05 41.2 4.9 32 109-146 110-142 (253)
428 3tnl_A Shikimate dehydrogenase 77.7 2 6.9E-05 42.9 4.7 34 107-146 154-188 (315)
429 1hyh_A L-hicdh, L-2-hydroxyiso 77.6 2.1 7.3E-05 42.4 5.0 32 109-146 3-36 (309)
430 3jyo_A Quinate/shikimate dehyd 77.6 2.1 7.3E-05 42.0 4.9 34 107-146 127-161 (283)
431 2f1k_A Prephenate dehydrogenas 77.6 2.2 7.4E-05 41.5 4.9 32 109-146 2-33 (279)
432 2rcy_A Pyrroline carboxylate r 77.6 2.7 9.3E-05 40.3 5.6 34 108-147 5-42 (262)
433 3cky_A 2-hydroxymethyl glutara 77.6 1.9 6.3E-05 42.5 4.5 33 108-146 5-37 (301)
434 1ju2_A HydroxynitrIle lyase; f 77.6 1.1 3.7E-05 48.5 2.9 36 106-148 25-60 (536)
435 1zud_1 Adenylyltransferase THI 77.5 1.9 6.6E-05 41.5 4.5 34 107-146 28-62 (251)
436 2qrj_A Saccharopine dehydrogen 77.5 2.1 7E-05 44.0 4.8 35 106-146 213-251 (394)
437 3uko_A Alcohol dehydrogenase c 77.5 2.3 8E-05 43.4 5.3 34 107-146 194-228 (378)
438 3ldh_A Lactate dehydrogenase; 77.4 2.2 7.5E-05 42.9 4.9 33 108-146 22-56 (330)
439 3mog_A Probable 3-hydroxybutyr 77.4 2.1 7.1E-05 45.5 5.0 33 108-146 6-38 (483)
440 3two_A Mannitol dehydrogenase; 77.3 2.2 7.5E-05 43.0 5.0 34 107-146 177-210 (348)
441 2i6t_A Ubiquitin-conjugating e 77.1 2.3 7.7E-05 42.3 4.9 34 108-147 15-50 (303)
442 3g79_A NDP-N-acetyl-D-galactos 77.1 2.1 7.2E-05 45.4 4.9 35 108-147 19-54 (478)
443 3vku_A L-LDH, L-lactate dehydr 77.0 2.5 8.7E-05 42.3 5.3 32 108-145 10-43 (326)
444 1yqg_A Pyrroline-5-carboxylate 76.9 2.4 8.2E-05 40.7 5.0 32 109-146 2-34 (263)
445 2izz_A Pyrroline-5-carboxylate 76.9 2.5 8.6E-05 42.2 5.3 33 108-146 23-59 (322)
446 1x0v_A GPD-C, GPDH-C, glycerol 76.8 1.7 5.9E-05 43.8 4.1 34 108-147 9-49 (354)
447 4gx0_A TRKA domain protein; me 76.7 2.2 7.5E-05 46.3 5.1 51 108-164 349-402 (565)
448 1piw_A Hypothetical zinc-type 76.6 2.3 8E-05 43.1 5.0 33 108-146 181-213 (360)
449 2d4a_B Malate dehydrogenase; a 76.5 2.7 9.2E-05 41.8 5.3 32 109-146 1-33 (308)
450 3h8v_A Ubiquitin-like modifier 76.4 2.6 8.9E-05 41.5 5.1 34 107-146 36-70 (292)
451 1hdo_A Biliverdin IX beta redu 76.2 4.5 0.00015 36.6 6.5 33 108-146 4-37 (206)
452 3ktd_A Prephenate dehydrogenas 76.0 2.8 9.7E-05 42.3 5.4 33 108-146 9-41 (341)
453 2h78_A Hibadh, 3-hydroxyisobut 75.9 2.1 7.2E-05 42.2 4.3 33 108-146 4-36 (302)
454 3pwz_A Shikimate dehydrogenase 75.6 2.7 9.3E-05 41.0 5.0 34 107-146 120-154 (272)
455 2g5c_A Prephenate dehydrogenas 75.6 2.5 8.7E-05 41.0 4.8 32 109-146 3-36 (281)
456 3fbt_A Chorismate mutase and s 75.5 2.1 7.3E-05 41.9 4.2 34 107-146 122-156 (282)
457 2d5c_A AROE, shikimate 5-dehyd 75.4 2.8 9.5E-05 40.5 5.0 32 109-146 118-149 (263)
458 2zqz_A L-LDH, L-lactate dehydr 75.4 2.9 0.0001 41.9 5.3 33 107-145 9-43 (326)
459 1nvt_A Shikimate 5'-dehydrogen 75.2 1.9 6.4E-05 42.4 3.7 32 108-146 129-160 (287)
460 2gf2_A Hibadh, 3-hydroxyisobut 75.2 2.5 8.4E-05 41.4 4.6 32 109-146 2-33 (296)
461 3ew7_A LMO0794 protein; Q8Y8U8 75.2 2.8 9.7E-05 38.6 4.8 32 109-146 2-34 (221)
462 3gpi_A NAD-dependent epimerase 75.1 3.1 0.00011 40.3 5.3 34 108-147 4-37 (286)
463 3c24_A Putative oxidoreductase 75.1 2.7 9.3E-05 41.0 4.9 33 108-146 12-45 (286)
464 1edz_A 5,10-methylenetetrahydr 75.0 2.2 7.4E-05 42.6 4.1 34 107-146 177-211 (320)
465 3rui_A Ubiquitin-like modifier 74.9 2.9 9.8E-05 42.1 5.0 34 107-146 34-68 (340)
466 3n58_A Adenosylhomocysteinase; 74.8 2.3 7.8E-05 44.4 4.3 34 107-146 247-280 (464)
467 3vps_A TUNA, NAD-dependent epi 74.7 3 0.0001 40.9 5.2 35 107-147 7-42 (321)
468 2cf5_A Atccad5, CAD, cinnamyl 74.5 2.9 9.9E-05 42.3 5.1 33 108-146 182-214 (357)
469 3t4e_A Quinate/shikimate dehyd 74.5 2.7 9.4E-05 41.8 4.7 34 107-146 148-182 (312)
470 3qsg_A NAD-binding phosphogluc 74.4 2.8 9.6E-05 41.7 4.8 32 108-145 25-57 (312)
471 3ojo_A CAP5O; rossmann fold, c 74.4 2.3 8E-05 44.4 4.3 34 108-147 12-45 (431)
472 1leh_A Leucine dehydrogenase; 74.2 2.9 0.0001 42.6 4.9 32 107-144 173-204 (364)
473 3orq_A N5-carboxyaminoimidazol 74.1 3.4 0.00012 42.3 5.5 35 107-147 12-46 (377)
474 2pgd_A 6-phosphogluconate dehy 74.0 3.1 0.00011 44.2 5.3 33 108-146 3-35 (482)
475 3o8q_A Shikimate 5-dehydrogena 73.9 2.8 9.5E-05 41.1 4.5 34 107-146 126-160 (281)
476 1n7h_A GDP-D-mannose-4,6-dehyd 73.8 5.4 0.00019 40.4 7.0 34 108-147 29-63 (381)
477 3h2s_A Putative NADH-flavin re 73.6 3.2 0.00011 38.4 4.7 32 109-146 2-34 (224)
478 2ydy_A Methionine adenosyltran 73.6 2.9 9.8E-05 41.1 4.7 33 108-146 3-36 (315)
479 1uuf_A YAHK, zinc-type alcohol 73.6 2.6 8.7E-05 43.0 4.4 33 108-146 196-228 (369)
480 1lu9_A Methylene tetrahydromet 73.4 3 0.0001 40.8 4.7 33 108-146 120-153 (287)
481 3h9u_A Adenosylhomocysteinase; 73.3 3.1 0.00011 43.3 4.9 34 107-146 211-244 (436)
482 4gwg_A 6-phosphogluconate dehy 73.2 3.5 0.00012 43.7 5.4 34 108-147 5-38 (484)
483 4gx0_A TRKA domain protein; me 73.2 2.2 7.5E-05 46.2 4.0 54 106-165 126-187 (565)
484 1npy_A Hypothetical shikimate 73.1 2.9 9.9E-05 40.7 4.4 33 108-146 120-153 (271)
485 3k30_A Histamine dehydrogenase 73.1 2.3 8E-05 47.3 4.2 99 108-285 524-624 (690)
486 2zyd_A 6-phosphogluconate dehy 73.0 3.1 0.00011 44.2 5.0 34 107-146 15-48 (480)
487 1yqd_A Sinapyl alcohol dehydro 72.9 2.9 9.9E-05 42.5 4.6 33 108-146 189-221 (366)
488 4aj2_A L-lactate dehydrogenase 72.9 3.7 0.00012 41.3 5.2 33 107-145 19-53 (331)
489 3e8x_A Putative NAD-dependent 72.9 3.2 0.00011 38.9 4.6 34 107-146 21-55 (236)
490 4g65_A TRK system potassium up 72.8 2.8 9.7E-05 44.2 4.6 51 107-164 235-294 (461)
491 4id9_A Short-chain dehydrogena 72.7 6.4 0.00022 39.2 7.1 55 107-167 19-75 (347)
492 2vt3_A REX, redox-sensing tran 72.7 6 0.00021 37.0 6.4 38 107-150 85-125 (215)
493 1a4i_A Methylenetetrahydrofola 72.7 3.2 0.00011 40.9 4.6 35 106-146 164-199 (301)
494 3fi9_A Malate dehydrogenase; s 72.6 3.7 0.00013 41.5 5.2 33 108-146 9-44 (343)
495 4gbj_A 6-phosphogluconate dehy 72.5 2.4 8.3E-05 41.8 3.8 36 106-147 4-39 (297)
496 3q2o_A Phosphoribosylaminoimid 72.5 3.2 0.00011 42.5 4.9 34 108-147 15-48 (389)
497 1p0f_A NADP-dependent alcohol 72.5 3 0.0001 42.4 4.6 33 108-146 193-226 (373)
498 1y8q_A Ubiquitin-like 1 activa 72.3 3.3 0.00011 41.9 4.8 34 107-146 36-70 (346)
499 2wtb_A MFP2, fatty acid multif 72.2 2.9 0.0001 46.8 4.8 33 108-146 313-345 (725)
500 1pgj_A 6PGDH, 6-PGDH, 6-phosph 72.2 3.4 0.00012 43.8 5.1 32 109-146 3-34 (478)
No 1
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=100.00 E-value=3.1e-81 Score=697.13 Aligned_cols=490 Identities=56% Similarity=1.009 Sum_probs=438.3
Q ss_pred cccccccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeee
Q 007716 101 MCRESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVP 180 (592)
Q Consensus 101 ~~~~~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~ 180 (592)
|+++.|++||||||||||||++|+.|++.+.+.++|++|+||||.+.+|++..+|+++.+++++++++.|...+.++...
T Consensus 29 ~~~~~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~ 108 (584)
T 2gmh_A 29 MERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTP 108 (584)
T ss_dssp CCCCEEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEE
T ss_pred ccccccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeee
Confidence 45567889999999999999999999997666667999999999998888888899999999999999998777777665
Q ss_pred ccCCcEEEeecCCcccCC---C-CCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcc
Q 007716 181 VSSDKFWFLTKDRAFSLP---S-PFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGI 256 (592)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~ 256 (592)
+..+.+.++.....+.++ . .+.+.+.|++++..|.++|.+++++.||+|+++++|+++..++++.|++|++.++|+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~ 188 (584)
T 2gmh_A 109 VTEDRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGI 188 (584)
T ss_dssp CCEEEEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEE
T ss_pred echhheeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccc
Confidence 555566666554444443 2 244556899999999999999999999999999999999998777888899998888
Q ss_pred cCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeeEEEEEeecCCCCCCCcEEEEeccCC
Q 007716 257 AKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPL 336 (592)
Q Consensus 257 ~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~~~~~~~~~~~~~g~~~~~~i~~~~~~~g~~~~~~~~~~ 336 (592)
+++|+++.+|++|.+++||+||+|||++|.+++++.+.+++.. ...++.+++|++++|.++.....++.+.|+++||+
T Consensus 189 ~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~--~~~p~~~g~g~~~~~~v~~~~~~~~~~~~~~g~~~ 266 (584)
T 2gmh_A 189 QKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRA--NCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPL 266 (584)
T ss_dssp CTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTT--TSCCCCEEEEEEEEEECCGGGCCTTEEEEEEETTS
T ss_pred cCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCC--CCCchhHHhhhhhheecCcccccCCeEEEEEeccc
Confidence 8999999999999999999999999999999999999998873 45677889999999988776667888899999998
Q ss_pred CCCCcceEEEEEcC--CCeEEEEEEecccCCCCCCCcHHHHHHhhcCccccccccCCceeeecceeeecCCccccCcccC
Q 007716 337 DQKTYGGSFLYHMN--DRQIALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVF 414 (592)
Q Consensus 337 ~~~~~g~~~~~~~~--~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~ 414 (592)
....+++.|+|+.. ++.++++++...++.++..++.+++++|+.+|.+.+++++++.+.++.+.++.+++..+++|..
T Consensus 267 ~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~l~~~~~~p~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (584)
T 2gmh_A 267 DRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLSPFREFQRWKHHPSIKPTLEGGKRIAYGARALNEGGFQSIPKLTF 346 (584)
T ss_dssp CTTSCEEEEEEECCSSSCEEEEEEEEETTCCCTTCCHHHHHHHHTTSTTTHHHHTTCEEEEEEEEEEECCGGGGCCCCEE
T ss_pred cCCcCCceEEEEecCCCCeEEEEEEEecCcccccCChHHHHHHHHhChHHHHHhCCCeEEEecceEccCCCcccCCcccc
Confidence 76677889999998 7899999998887766667788899999889999999988888888888888888888899999
Q ss_pred CCEEEEcCCCcccCCCCccchHHHHHHHHHHHHHHhhhccC-----Cch---HHHHHHHHHHhHHHHHHHHHHcchhhhh
Q 007716 415 PGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE-----DSN---MEIYWDTLQKSWVWQELQRARNYRPAFE 486 (592)
Q Consensus 415 ~~v~LiGDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~-----~~~---l~~Y~~~~~~~~~~~~l~~~r~~~~~~~ 486 (592)
+|++|||||||+++|+.|||+++||+||++||++|.+++.. ..+ |+.|+++++++|+.++++.+|+++++|+
T Consensus 347 ~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~~~~~a~~~L~~Ye~~r~~~~v~~~l~~~r~~~~~~~ 426 (584)
T 2gmh_A 347 PGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSCH 426 (584)
T ss_dssp TTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCCCCSSSSCCCTHHHHHHHTSHHHHHHHHTTTTTGGGG
T ss_pred CCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCcchhhhhhhHHHHHHHHHHhHHHHHHHHHhChhHHHH
Confidence 99999999999999999999999999999999999987642 233 8999999999999999999999999986
Q ss_pred -h-cchHHHHHHHHHHHHccCCCCccccCCCCCcccchhhhcCCCCCCCCCCCcccccccccccccCCCCCCCCCCcEEe
Q 007716 487 -Y-GLLPGLAICGLEHYILRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTNHEHDQPAHLRL 564 (592)
Q Consensus 487 -~-g~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~~~~~~~~~~~~~~y~~pd~~l~~d~~~~~~~~~~~h~~~~~~h~~~ 564 (592)
+ |+|++++..+++.|+.+|+.||+++|.++|+..+++++++++|+||||||+||||+++|||+|||+|+|||||||+|
T Consensus 427 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hl~~ 506 (584)
T 2gmh_A 427 GILGVYGGMIYTGIFYWIFRGMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTL 506 (584)
T ss_dssp STTTHHHHHHHHHHHTTTTTTCCSCCCCCCSCGGGCCCCGGGSCCCCCCCCCSSSSCCHHHHHHTTTCBCCSSSCCSEEE
T ss_pred HhhccHHHHHHHHHHHHHcCCCCCCccCCCCCCchhhhhHHhcCCCCCCCccccccccccchhhhccccccCCCCCeEEE
Confidence 4 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCccccCccCccCccccccCCCcCC
Q 007716 565 RDPKIPELVNLPEYAGPESRYCPARVYE 592 (592)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~cp~~vy~ 592 (592)
+|+++|.+.|++.|.+||+|||||||||
T Consensus 507 ~d~~~~~~~~~~~~~~~c~~~CPa~~~~ 534 (584)
T 2gmh_A 507 KDDSVPVNRNLSIYDGPEQRFCPAGVYE 534 (584)
T ss_dssp SSTTHHHHTHHHHHCCTHHHHCTTCCEE
T ss_pred cCcccchhhchhhhcchhhhcCChhhEE
Confidence 9999999999999999999999999996
No 2
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.6e-35 Score=312.89 Aligned_cols=339 Identities=19% Similarity=0.272 Sum_probs=224.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.|||+|||||||||++|+.|++. |++|+||||.+.+|....+|+.+.++.++++- .. .....+...+. ..
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~------G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~-~~-~~~~~~~~~~~--~~ 73 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKY------GLKTLMIEKRPEIGSPVRCGEGLSKGILNEAD-IK-ADRSFIANEVK--GA 73 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSTTCSCCSCCEEETHHHHHTT-CC-CCTTTEEEEES--EE
T ss_pred CCCEEEECcCHHHHHHHHHHHHC------CCcEEEEeCCCCCCCCCceecccCHHHHHHcC-CC-chhhhhhcccc--eE
Confidence 59999999999999999999999 99999999999888877788889888775541 11 11112222222 22
Q ss_pred EEeecCCc--ccCCC-CCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcc
Q 007716 187 WFLTKDRA--FSLPS-PFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKK 263 (592)
Q Consensus 187 ~~~~~~~~--~~~~~-~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~ 263 (592)
.+...... +.... .......|+++|..+.++|.+.+++.|+++++++.|+++..++ +.+.+|.... +|+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~-~~~~~v~~~~-----~~~-- 145 (397)
T 3oz2_A 74 RIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN-GKVAGAKIRH-----NNE-- 145 (397)
T ss_dssp EEECTTCSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET-TEEEEEEEEE-----TTE--
T ss_pred EEEeCCCceEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeecc-ceeeeeeecc-----ccc--
Confidence 22222211 11111 1223347899999999999999999999999999999998876 5666665432 222
Q ss_pred cccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeeEEEEEeecCCCCCCCcEEEEeccCCCCCCcce
Q 007716 264 ENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGG 343 (592)
Q Consensus 264 ~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~~~~~~~~~~~~~g~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~g~ 343 (592)
+.+++||+||+|||.+|.+|+++ ++.. ...........+ .+........++....+++. ..+ .|.
T Consensus 146 -----~~~~~a~~vIgAdG~~S~vr~~~----g~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~--~g~ 210 (397)
T 3oz2_A 146 -----IVDVRAKMVIAADGFESEFGRWA----GLKS-VILARNDIISAL--QYRMINVDVDPDYTDFYLGS-IAP--AGY 210 (397)
T ss_dssp -----EEEEEEEEEEECCCTTCHHHHHH----TCGG-GCCCGGGEEEEE--EEEEESCCCCTTEEEEECST-TST--TEE
T ss_pred -----ceEEEEeEEEeCCccccHHHHHc----CCCc-ccccceeeeeeE--EEEeeccccCcccceeeeec-cCC--Cce
Confidence 36799999999999999999876 5542 111111111111 12233333344544444443 222 256
Q ss_pred EEEEEcCCCeEEEEEEecccCCCCCCCcHHHHHHhh-cCccccccccCCceeeecceeeecCCccccCcccCCCEEEEcC
Q 007716 344 SFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFK-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGC 422 (592)
Q Consensus 344 ~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~-~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~LiGD 422 (592)
.|++|..++..++|+....+.........+.++++. .+|.+ ...+.+......++..... .++..+|++|+||
T Consensus 211 ~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~l~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~--~~~~~~~v~lvGD 284 (397)
T 3oz2_A 211 IWVFPKGEGMANVGIGSSINWIHNRFELKNYLDRFIENHPGL----KKGQDIQLVTGGVSVSKVK--MPITMPGLMLVGD 284 (397)
T ss_dssp EEEEEEETTEEEEEEEEETTTSCSHHHHHHHHHHHHHTCHHH----HTSEEEEEEEEEEECCCCC--SCCEETTEEECGG
T ss_pred EEEeecccceeEEEEeeccchhhhhhhHHHHHHHHHHhCccc----cccceeeeeeccccccCcc--cceeeeeEEEccc
Confidence 899999999999998876554332222233344443 34433 2333343323334433322 3567789999999
Q ss_pred CCcccCCCCccchHHHHHHHHHHHHHHhhhccC----CchHHHHHHHHHHhHHHHHHHHHHcchhhh
Q 007716 423 AAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE----DSNMEIYWDTLQKSWVWQELQRARNYRPAF 485 (592)
Q Consensus 423 AA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~----~~~l~~Y~~~~~~~~~~~~l~~~r~~~~~~ 485 (592)
|||+++|+.|||+++||+||.+||++|.+++.. ...|+.|++.++++ +.+++......++.+
T Consensus 285 AA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~~~~~~~L~~Ye~~~~~~-~~~~~~~~~~~~~~~ 350 (397)
T 3oz2_A 285 AARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQMMQKYEKLIKER-FERKHLRNWVAKEKL 350 (397)
T ss_dssp GGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred ccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988754 25789999999987 444444444444444
No 3
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=100.00 E-value=1e-31 Score=284.49 Aligned_cols=339 Identities=19% Similarity=0.256 Sum_probs=227.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
++||+|||||++|+++|+.|++. |++|+||||...+|....+++.+.++.++++ ..|.. ...... ....+
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~------G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~l-g~~~~-~~~~~~--~~~~~ 73 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKY------GLKTLMIEKRPEIGSPVRCGEGLSKGILNEA-DIKAD-RSFIAN--EVKGA 73 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSTTCSCCSCCEEETHHHHHT-TCCCC-TTTEEE--EESEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHC------CCCEEEEeCCCCCCCCcccccccCHHHHHHc-CCCCC-hHHhhh--hcceE
Confidence 58999999999999999999999 9999999999877776667777766655443 11111 011111 11222
Q ss_pred EEeecCC-c-ccCCCC-CCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcc
Q 007716 187 WFLTKDR-A-FSLPSP-FSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKK 263 (592)
Q Consensus 187 ~~~~~~~-~-~~~~~~-~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~ 263 (592)
.+..... . +.++.. ......+.+++..+.+.|.+.+++.|++|+++++|+++..++ +.+.+|++.+. +
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~~~-----~--- 144 (397)
T 3cgv_A 74 RIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN-GKVAGAKIRHN-----N--- 144 (397)
T ss_dssp EEECTTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET-TEEEEEEEEET-----T---
T ss_pred EEEcCCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeC-CEEEEEEEEEC-----C---
Confidence 2322221 1 222211 112347899999999999999999999999999999998875 66766777430 1
Q ss_pred cccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeeEEEEEeecCCCCCCCcEEEEeccCCCCCCcce
Q 007716 264 ENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGG 343 (592)
Q Consensus 264 ~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~~~~~~~~~~~~~g~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~g~ 343 (592)
++.+++||+||+|+|.+|.+++++ ++.. ....+..+..++.. .+......++....+++. ..+ .|.
T Consensus 145 ----~~~~~~a~~vV~A~G~~s~~~~~~----g~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~--~g~ 210 (397)
T 3cgv_A 145 ----EIVDVRAKMVIAADGFESEFGRWA----GLKS-VILARNDIISALQY--RMINVDVDPDYTDFYLGS-IAP--AGY 210 (397)
T ss_dssp ----EEEEEEEEEEEECCCTTCHHHHHH----TCCT-TCCCGGGEEEEEEE--EEESCCCCTTEEEEECST-TST--TEE
T ss_pred ----eEEEEEcCEEEECCCcchHhHHhc----CCCc-cCCChhheeEEEEE--EeccCCCCCCcEEEEeCC-cCC--Cce
Confidence 257899999999999999888866 5541 01123344444432 233323334444444432 222 256
Q ss_pred EEEEEcCCCeEEEEEEecccCCCCCCCcHHHHHHhhc-CccccccccCCceeeecceeeecCCccccCcccCCCEEEEcC
Q 007716 344 SFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFKH-HPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGC 422 (592)
Q Consensus 344 ~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~-~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~LiGD 422 (592)
.|++|..++.+.+++....+.......+.+.++.+.. .|. +...+.+......++..+ ..+++..+|++++||
T Consensus 211 ~~~~P~~~~~~~vg~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~p~~~--~~~~~~~~~v~liGD 284 (397)
T 3cgv_A 211 IWVFPKGEGMANVGIGSSINWIHNRFELKNYLDRFIENHPG----LKKGQDIQLVTGGVSVSK--VKMPITMPGLMLVGD 284 (397)
T ss_dssp EEEEEEETTEEEEEEEEETTTCSCHHHHHHHHHHHHHTCHH----HHTSEEEEEEEEEEECCC--CCSCCEETTEEECGG
T ss_pred EEEEECCCCeEEEEEEeccccccCCCCHHHHHHHHHHhCcC----CCCCeEEeeeeeeeecCC--CccceeeCCEEEEEc
Confidence 8999999989899988765432111223344444432 222 223344443334455433 346788899999999
Q ss_pred CCcccCCCCccchHHHHHHHHHHHHHHhhhccC----CchHHHHHHHHHHhHHHHHHHHHHcchhhh
Q 007716 423 AAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE----DSNMEIYWDTLQKSWVWQELQRARNYRPAF 485 (592)
Q Consensus 423 AA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~----~~~l~~Y~~~~~~~~~~~~l~~~r~~~~~~ 485 (592)
|||+++|+.|+|+++||+||..||+.|.+.+.. ...|+.|++.+++. +.+++...+.+..++
T Consensus 285 Aa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~~~~~~~~l~~Y~~~~~~~-~~~~~~~~~~~~~~~ 350 (397)
T 3cgv_A 285 AARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQMMQKYEKLIKER-FERKHLRNWVAKEKL 350 (397)
T ss_dssp GGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred cccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 999999999999999999999999999987633 25789999998876 888888888877766
No 4
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.98 E-value=3.5e-31 Score=286.26 Aligned_cols=342 Identities=16% Similarity=0.185 Sum_probs=219.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCC-CcccccCccChHHHHHhhHhhhhcCC---Ceeeec
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG-AHIISGNVFEPRALNELLPQWKQEEA---PIRVPV 181 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g-~~~~~g~~i~~~~l~~ll~~~~~~~~---~~~~~~ 181 (592)
+++||+||||||+|+++|+.|++. |++|+||||.+... +...+|..+..+.+.++ ..... ......
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~------G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~l----g~~~~~~~~~~~~~ 74 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRR------GLKILLVDSKPWNRIGDKPCGDAVSKAHFDKL----GMPYPKGEELENKI 74 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSS------SCCEEEECSSCGGGTTCSCCCCEEEHHHHHHT----TCCCCCGGGEEEEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCCCCCCCcccccccccHHHHHHh----cCCCCchHHHHhhh
Confidence 469999999999999999999998 99999999987542 23345655544444332 11110 011111
Q ss_pred cCCcEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCC
Q 007716 182 SSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGS 261 (592)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~ 261 (592)
..+.+........++. ....+.++|..+.+.|.+.+++.|++|+++++|+++..++ +.+++|++.+. .+|+
T Consensus 75 --~~~~~~~~~~~~~~~~---~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~~~---~~G~ 145 (453)
T 3atr_A 75 --NGIKLYSPDMQTVWTV---NGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFED-GYVKGAVLFNR---RTNE 145 (453)
T ss_dssp --EEEEEECTTSSCEEEE---EEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET-TEEEEEEEEET---TTTE
T ss_pred --cceEEECCCCceEEeE---CCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEEC-CEEEEEEEEEc---CCCc
Confidence 1122222221111111 1125789999999999999999999999999999998876 56766766430 0232
Q ss_pred cccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcc--cccCcccceeeEEEEEeecCCCCCCCcEEEEeccCCCCC
Q 007716 262 KKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREK--SHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQK 339 (592)
Q Consensus 262 ~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~~~--~~~~~~~~~~g~~~~~~i~~~~~~~g~~~~~~~~~~~~~ 339 (592)
. .+++||+||+|||.+|.+++.+ +.... ....+..+..++...+.+......++....+++.+..++
T Consensus 146 ~-------~~~~ad~VV~AdG~~s~vr~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (453)
T 3atr_A 146 E-------LTVYSKVVVEATGYSRSFRSKL----PPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPG 214 (453)
T ss_dssp E-------EEEECSEEEECCGGGCTTGGGS----CTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTT
T ss_pred e-------EEEEcCEEEECcCCchhhHHhc----CCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCC
Confidence 1 4899999999999999998854 44310 001122345556555555433223343333444333333
Q ss_pred CcceEEEEEcCCCeEEEEEEecccCCCCCCCcHHHHHHhhcCccccccccCCceeeecceeeecCCccccCcccCCCEEE
Q 007716 340 TYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAI 419 (592)
Q Consensus 340 ~~g~~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~L 419 (592)
|..|++|..++.+++++....+.. ...+.+.+..+... +.+.+.+.+.+......++.. ..+++|..+|++|
T Consensus 215 --g~~~~~P~~~~~~~vg~~~~~~~~--~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~v~l 286 (453)
T 3atr_A 215 --GYWWYFPKGKNKVNVGLGIQGGMG--YPSIHEYYKKYLDK--YAPDVDKSKLLVKGGALVPTR--RPLYTMAWNGIIV 286 (453)
T ss_dssp --SCEEEEEEETTEEEEEEEEESSSC--CCCHHHHHHHHHHH--HCTTEEEEEEEEEEEEEEECS--SCCSCSEETTEEE
T ss_pred --cEEEEEECCCCeEEEEEEecCCCC--CCCHHHHHHHHHHh--hhhhcCCCeEEeccceeccCC--CCCCceecCCEEE
Confidence 458999998889999888754321 12334444443310 111222223333222233432 2457888899999
Q ss_pred EcCCCcccCCCCccchHHHHHHHHHHHHHHhhhccC----CchHHHHHHHHHHhHHHHHHHHHHcchhhhh
Q 007716 420 IGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE----DSNMEIYWDTLQKSWVWQELQRARNYRPAFE 486 (592)
Q Consensus 420 iGDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~----~~~l~~Y~~~~~~~~~~~~l~~~r~~~~~~~ 486 (592)
+|||||+++|+.|||+++||+||..||++|.+++.. ...|..|++.+++. +.+.+..++.++.++.
T Consensus 287 vGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~~~~~~~L~~Y~~~r~~~-~~~~~~~~~~~~~~~~ 356 (453)
T 3atr_A 287 IGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGDFSASGLWDMNICYVNE-YGAKQASLDIFRRFLQ 356 (453)
T ss_dssp CGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSTTTTTHHHHHHHHH-THHHHHHHHHHHHHHT
T ss_pred EeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999886532 46799999999976 7777777777776653
No 5
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.97 E-value=2.3e-30 Score=275.82 Aligned_cols=329 Identities=16% Similarity=0.122 Sum_probs=209.0
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhh------hhcCCCee
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQW------KQEEAPIR 178 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~------~~~~~~~~ 178 (592)
...+||+||||||+||++|+.|++. |++|+||||.+.++. ...+..+.+.++. ++..+ .....+
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~------G~~V~v~E~~~~~~~-~~~~~~l~~~~~~-~l~~lg~~~~~~~~~~~-- 90 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQS------GIDCDVYEAVKEIKP-VGAAISVWPNGVK-CMAHLGMGDIMETFGGP-- 90 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSCC-----CEEEECHHHHH-HHHHTTCHHHHHHHSCC--
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC------CCCEEEEeCCCCCCC-cCeeEEECHHHHH-HHHHCCCHHHHHhhcCC--
Confidence 3569999999999999999999999 999999999876543 2345566666552 22222 111211
Q ss_pred eeccCCcEEEeecC-Cc--ccCCCC----CCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEe
Q 007716 179 VPVSSDKFWFLTKD-RA--FSLPSP----FSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGT 251 (592)
Q Consensus 179 ~~~~~~~~~~~~~~-~~--~~~~~~----~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~ 251 (592)
...+.+.... .. ..++.. ......+.++|..|.+.|.+.+++ ++|+++++|++++.++++ + .|++
T Consensus 91 ----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~-v-~v~~ 162 (407)
T 3rp8_A 91 ----LRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADG-V-TVWF 162 (407)
T ss_dssp ----CCEEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTE-E-EEEE
T ss_pred ----CcceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCc-E-EEEE
Confidence 1222222221 11 111110 011347889999999999999977 899999999999988743 3 4666
Q ss_pred ccCcccCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCccccee-eEEEEEeecCCCCCCCcEEE
Q 007716 252 NDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYAL-GIKEVWEIDEGKHNPGEILH 330 (592)
Q Consensus 252 ~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~~~~~~~~~~~~~-g~~~~~~i~~~~~~~g~~~~ 330 (592)
.+ |.+++||+||+|||.+|.+|+++. +... .+...+. .+.....++...........
T Consensus 163 ~~---------------g~~~~a~~vV~AdG~~S~vr~~l~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (407)
T 3rp8_A 163 TD---------------GSSASGDLLIAADGSHSALRPWVL---GFTP----QRRYAGYVNWNGLVEIDEALAPGDQWTT 220 (407)
T ss_dssp TT---------------SCEEEESEEEECCCTTCSSHHHHH---SSCC----CCEEEEEEEEEEEEECCTTTCCTTEEEE
T ss_pred cC---------------CCEEeeCEEEECCCcChHHHHHhc---CCCC----CCcccCcEEEEEEEecccccCCCCceEE
Confidence 65 678999999999999999999873 3321 1222221 22222333322222222222
Q ss_pred EeccCCCCCCcceEEEEEcCCCeEEEEEEecccCCCCCCCc---HHHHH-Hhhc-CccccccccCCc---eeeecceeee
Q 007716 331 TLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNP---YEEFQ-KFKH-HPAIKPLLEGGT---VVQYGARTLN 402 (592)
Q Consensus 331 ~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~~~~~~~~~~---~~~~~-~~~~-~p~i~~~l~~~~---~~~~~~~~i~ 402 (592)
+++ + .+..|++|.+++.+.+.+....+... ...+ .+.+. .+.. .|.+..+++... ...+ ...+
T Consensus 221 ~~~----~--~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 291 (407)
T 3rp8_A 221 FVG----E--GKQVSLMPVSAGRFYFFFDVPLPAGL-AEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRI--EIHD 291 (407)
T ss_dssp EEE----T--TEEEEEEEETTTEEEEEEEEECCTTC-SCCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEE--EEEE
T ss_pred EEC----C--CcEEEEEEcCCCeEEEEEEeCCCcCC-CCCchhHHHHHHHHhcCCChHHHHHHHcCCccceeEE--eeEe
Confidence 221 2 24578999999888777766432211 1121 22222 2222 344444433221 1111 1122
Q ss_pred cCCccccCcccCCCEEEEcCCCcccCCCCccchHHHHHHHHHHHHHHhhhccCCchHHHHHHHHHHhHHHHHHHHHHcch
Q 007716 403 EGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKSWVWQELQRARNYR 482 (592)
Q Consensus 403 ~gg~~~~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~~~~l~~Y~~~~~~~~~~~~l~~~r~~~ 482 (592)
. ...++|..+|++|||||||.++|+.|||+++||+||..||++|.+.......|+.|++.++.. ....+..++.+.
T Consensus 292 ~---~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~~~~l~~Y~~~r~~~-~~~~~~~s~~~~ 367 (407)
T 3rp8_A 292 I---EPFSRLVRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQTRDIAAALREYEAQRCDR-VRDLVLKARKRC 367 (407)
T ss_dssp C---CCCSCCEETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred c---CCCCceecCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-HHHHHHHHHHhh
Confidence 1 123688889999999999999999999999999999999999987542246799999999976 888888888888
Q ss_pred hhhh
Q 007716 483 PAFE 486 (592)
Q Consensus 483 ~~~~ 486 (592)
.+++
T Consensus 368 ~~~~ 371 (407)
T 3rp8_A 368 DITH 371 (407)
T ss_dssp HHHT
T ss_pred hhhh
Confidence 8875
No 6
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.97 E-value=2.2e-29 Score=276.23 Aligned_cols=328 Identities=18% Similarity=0.228 Sum_probs=210.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHh---hh---hcCCCeee
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQ---WK---QEEAPIRV 179 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~---~~---~~~~~~~~ 179 (592)
+++||||||||++|+++|+.|++. |++|+||||...... ..|..+.+..+..++.. +. ....+...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~------G~~V~liE~~~~~~~--~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~ 77 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMR------GHRVLLLEREAFPRH--QIGESLLPATVHGICAMLGLTDEMKRAGFPIKR 77 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT------TCCEEEECSSCSSCC--CSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEEC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhC------CCCEEEEccCCCCCC--CCCcccCcchHHHHHHHhCcHHHHHHcCCcccc
Confidence 469999999999999999999998 999999999874332 23455555544323222 11 11111111
Q ss_pred eccCCcEEEeecCCc--ccCC--CCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCc
Q 007716 180 PVSSDKFWFLTKDRA--FSLP--SPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMG 255 (592)
Q Consensus 180 ~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g 255 (592)
. ..+.+...... +.+. ........|.+++..+.+.|.+.+++.||+|+++++|+++..++ +.+.+|++.+
T Consensus 78 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~-~~v~gv~~~~-- 151 (512)
T 3e1t_A 78 G---GTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEG-ERAVGVRYRN-- 151 (512)
T ss_dssp E---EEEECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEET-TEEEEEEEEC--
T ss_pred C---ceEEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEEC-CEEEEEEEEe--
Confidence 0 00000000000 1111 11122336789999999999999999999999999999999876 6676777654
Q ss_pred ccCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeeEEEEEeecC--CCCCCCcEEEEec
Q 007716 256 IAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDE--GKHNPGEILHTLG 333 (592)
Q Consensus 256 ~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~~~~~~~~~~~~~g~~~~~~i~~--~~~~~g~~~~~~~ 333 (592)
.+|+. .+++||+||+|||.+|.+++++ +.+. . .......++...+.... .....+.....+.
T Consensus 152 --~dG~~-------~~i~ad~VI~AdG~~S~vr~~l----g~~~--~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 215 (512)
T 3e1t_A 152 --TEGVE-------LMAHARFIVDASGNRTRVSQAV----GERV--Y-SRFFQNVALYGYFENGKRLPAPRQGNILSAAF 215 (512)
T ss_dssp --SSSCE-------EEEEEEEEEECCCTTCSSGGGT----CCEE--E-CSTTCEEEEEEEEESCCCCSTTCTTSEEEEEE
T ss_pred --CCCCE-------EEEEcCEEEECCCcchHHHHHc----CCCc--c-CchhcceEEEEEecCCccCCCCCcCceEEEEe
Confidence 33432 5899999999999999999865 5442 1 11112234433333211 1112233333221
Q ss_pred cCCCCCCcceEEEEEcCCCeEEEEEEecccCCCCCC-CcHHHHHHhh-cCccccccccCCceeee-cceeeec-CCc-cc
Q 007716 334 WPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFL-NPYEEFQKFK-HHPAIKPLLEGGTVVQY-GARTLNE-GGL-QS 408 (592)
Q Consensus 334 ~~~~~~~~g~~~~~~~~~~~~~vg~~~~~~~~~~~~-~~~~~~~~~~-~~p~i~~~l~~~~~~~~-~~~~i~~-gg~-~~ 408 (592)
+ .|..|++|..++.+.++++...+...... .+.+.++.+. .+|.+.+.+.....+.. ....++. ..+ ..
T Consensus 216 ----~--~G~~~~~Pl~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~ 289 (512)
T 3e1t_A 216 ----Q--DGWFWYIPLSDTLTSVGAVVSREAAEAIKDGHEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYC 289 (512)
T ss_dssp ----T--TEEEEEEECSSSEEEEEEEEEHHHHTTTSSCHHHHHHHHHHTSHHHHHHHTTCEECCSSTTSSCEEEESCCEE
T ss_pred ----C--CceEEEEEeCCCeEEEEEEecHHHhhhhcCCHHHHHHHHHHhCchHHHHHhcCccccccccccceeecccccc
Confidence 1 25678999999889999887655433222 3555666554 46777776665443321 1111111 111 13
Q ss_pred cCcccCCCEEEEcCCCcccCCCCccchHHHHHHHHHHHHHHhhhccCC----chHHHHHHHHHHh
Q 007716 409 IPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHED----SNMEIYWDTLQKS 469 (592)
Q Consensus 409 ~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~~----~~l~~Y~~~~~~~ 469 (592)
.+++..+|++|||||||+++|+.|||+++||+||..||++|...+... .+|+.|++.+++.
T Consensus 290 ~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~L~~~l~~~~~~~~aL~~Ye~~~~~~ 354 (512)
T 3e1t_A 290 NTSFWKNGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTCLAGEMSEQRCFEEFERRYRRE 354 (512)
T ss_dssp ESCSBCSSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHH
T ss_pred ccccccCCEEEEechhhcCCCccccCHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHH
Confidence 457778999999999999999999999999999999999999877542 4689999998865
No 7
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.97 E-value=2.5e-29 Score=268.66 Aligned_cols=324 Identities=18% Similarity=0.181 Sum_probs=204.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHh------hhhcCCCeee
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQ------WKQEEAPIRV 179 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~------~~~~~~~~~~ 179 (592)
+++||+|||||++|+++|+.|++. |++|+||||....+. ..|..+.+..+. ++.. ......+..
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~------G~~V~v~E~~~~~~~--~~g~~~~~~~~~-~l~~~g~~~~~~~~~~~~~- 73 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKS------GFKVKIVEKQKFPRF--VIGESLLPRCME-HLDEAGFLDAVKAQGFQQK- 73 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT------TCCEEEECSSCSSCC--CSCCBCCGGGHH-HHHHTTCHHHHHHTTCEEE-
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC------CCCEEEEeCCCCCCC--cccCcccHhHHH-HHHHcCChHHHHHcCCccc-
Confidence 458999999999999999999998 999999999875432 346667665542 2221 111111111
Q ss_pred eccCCcEEEeecCC--cccCCCCC--CCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCc
Q 007716 180 PVSSDKFWFLTKDR--AFSLPSPF--SNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMG 255 (592)
Q Consensus 180 ~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g 255 (592)
....+..... .+.+.... .....+.+++..+.+.|.+.+++.|++|+++++|+++..++++.++.|.+.+
T Consensus 74 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~-- 147 (421)
T 3nix_A 74 ----FGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDIN-- 147 (421)
T ss_dssp ----CEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETT--
T ss_pred ----CCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCC--
Confidence 1111111111 11222111 1234688999999999999999999999999999999988755555565544
Q ss_pred ccCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeeEEEEEeec--CCCCCCCcEEEEec
Q 007716 256 IAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEID--EGKHNPGEILHTLG 333 (592)
Q Consensus 256 ~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~~~~~~~~~~~~~g~~~~~~i~--~~~~~~g~~~~~~~ 333 (592)
|+. .+++||+||+|+|.+|.+++.+ +++. ....+... .+...+... ......+....++.
T Consensus 148 ----g~~-------~~~~a~~vV~A~G~~s~l~~~~----g~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (421)
T 3nix_A 148 ----GNK-------REIEARFIIDASGYGRVIPRMF----GLDK-PSGFESRR--TLFTHIKDVKRPVAAEMEGNRITAV 209 (421)
T ss_dssp ----SCE-------EEEEEEEEEECCGGGCHHHHHT----TCEE-CCSSCCCE--EEEEEEECTTCCC----CCSEEEEE
T ss_pred ----CCE-------EEEEcCEEEECCCCchhhHHhc----CCCC-CCcCCCcE--EEEEEECCCcCCCccCCCCeEEEEE
Confidence 221 3799999999999999887653 6553 11111111 121111111 11111122222221
Q ss_pred cCCCCCCcceEEEEEcCCCeEEEEEEecccCCCC-CCCcHHHHHHhh-cCccccccccCCceeeecceeeecCCccccCc
Q 007716 334 WPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNP-FLNPYEEFQKFK-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPY 411 (592)
Q Consensus 334 ~~~~~~~~g~~~~~~~~~~~~~vg~~~~~~~~~~-~~~~~~~~~~~~-~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~ 411 (592)
+... .|..|++|..++.+.+|++...+.... ...+.+.++.+. .+|.+.+.++...... ..+.++.. ....++
T Consensus 210 -~~~~--~g~~~~~P~~~~~~~vg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~l~~~~~~~-~~~~~~~~-~~~~~~ 284 (421)
T 3nix_A 210 -VHKP--KVWIWVIPFSNGNTSVGFVGEPSYFDEYTGTPEERMRAMIANEGHIAERFKSEEFLF-EPRTIEGY-AISASK 284 (421)
T ss_dssp -EEET--TEEEEEEECTTSEEEEEEEECHHHHTTSCSCHHHHHHHHHHTCTTTHHHHTTCCBSS-CCEEEECC-CBEESC
T ss_pred -eCCC--CEEEEEEEECCCCEEEEEEecHHHhhhcCCCHHHHHHHHHHhCcHHHHHHhcCcccc-Cceeeccc-ceeeee
Confidence 1112 245789999999999999876653322 124555555554 4677777666544331 11222211 113456
Q ss_pred ccCCCEEEEcCCCcccCCCCccchHHHHHHHHHHHHHHhhhccCC--chHHHHHHHHHH
Q 007716 412 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHED--SNMEIYWDTLQK 468 (592)
Q Consensus 412 ~~~~~v~LiGDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~~--~~l~~Y~~~~~~ 468 (592)
+..+++++||||||+++|+.|+|+++||+||..||++|.+.+... ..+..|++.++.
T Consensus 285 ~~~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~~~~~~~~~~~y~~~~~~ 343 (421)
T 3nix_A 285 LYGDGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFLKGEEVNWEKDFVEHMMQ 343 (421)
T ss_dssp SEETTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHTHHHHHH
T ss_pred eccCCEEEecccccccCCcccccHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 778999999999999999999999999999999999999887653 457778877764
No 8
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.96 E-value=7.7e-28 Score=262.76 Aligned_cols=335 Identities=15% Similarity=0.054 Sum_probs=204.4
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCC
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~ 184 (592)
.+++||+||||||+||++|+.|++. |++|+||||.+.++. ...+..+.++++ +++..+......... ....
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~------G~~v~vlE~~~~~~~-~~r~~~l~~~~~-~~l~~lGl~~~~~~~-~~~~ 80 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLG------GVDVMVLEQLPQRTG-ESRGLGFTARTM-EVFDQRGILPAFGPV-ETST 80 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESCSSCCC-CCCSEEECHHHH-HHHHHTTCGGGGCSC-CEES
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCCCCCC-CCceeEECHHHH-HHHHHCCCHHHHHhc-cccc
Confidence 3579999999999999999999999 999999999877653 245667888776 344333221100000 0001
Q ss_pred cEEEeecCCcccCCCCC-CCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcc
Q 007716 185 KFWFLTKDRAFSLPSPF-SNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKK 263 (592)
Q Consensus 185 ~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~ 263 (592)
...+ ....++..... .....+.+++..+.+.|.+.+++.|++|+++++|+++..++++ | .|++.+ .+|.
T Consensus 81 ~~~~--~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~----~~g~-- 150 (499)
T 2qa2_A 81 QGHF--GGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDH-V-VVEVEG----PDGP-- 150 (499)
T ss_dssp EEEE--TTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSC-E-EEEEEC----SSCE--
T ss_pred ccee--cceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-E-EEEEEc----CCCc--
Confidence 1111 01111111111 1122578999999999999999999999999999999988754 4 366654 1121
Q ss_pred cccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeeEEEEEeecCCCCCCCcEEEEeccCCCCCCcce
Q 007716 264 ENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGG 343 (592)
Q Consensus 264 ~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~~~~~~~~~~~~~g~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~g~ 343 (592)
.+++||+||+|||.+|.+|+++ ++.. ....... .++.....+.. .+.. .+.+. .++ |.
T Consensus 151 ------~~~~a~~vVgADG~~S~VR~~l----g~~~-~~~~~~~--~~~~~~v~~~~---~~~~-~~~~~---~~~--g~ 208 (499)
T 2qa2_A 151 ------RSLTTRYVVGCDGGRSTVRKAA----GFDF-PGTSASR--EMFLADIRGCE---ITPR-PIGET---VPL--GM 208 (499)
T ss_dssp ------EEEEEEEEEECCCTTCHHHHHT----TCCC-CEECCCC--CEEEEEEESCC---CCCE-EEEEE---ETT--EE
T ss_pred ------EEEEeCEEEEccCcccHHHHHc----CCCC-CCCCCcc--EEEEEEEEECC---CCcc-eEEEE---CCC--eE
Confidence 4799999999999999999875 5543 1111111 12222222221 2222 22221 122 45
Q ss_pred EEEEEcCCCeEEEEEEecccCCC---CCCCcHHHHHHhhcCccccccccCCceeeecceeeecCCccccCcccCCCEEEE
Q 007716 344 SFLYHMNDRQIALGLVVALNYHN---PFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAII 420 (592)
Q Consensus 344 ~~~~~~~~~~~~vg~~~~~~~~~---~~~~~~~~~~~~~~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~Li 420 (592)
.|++|.+++...+.+........ ...++.+..+.+... +...+...+ +.+. ..++ ......++|..+|++|+
T Consensus 209 ~~~~P~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~-~~~~-~~~~-~~~~~a~~~~~grv~L~ 283 (499)
T 2qa2_A 209 VMSAPLGDGVDRIIVCERGAPARRRTGPPPYQEVAAAWQRL--TGQDISHGE-PVWV-SAFG-DPARQVSAYRRGRVLLA 283 (499)
T ss_dssp EEEEECSSSCEEEEEEETTCCCCCCSSSCCHHHHHHHHHHH--HSCCCTTCE-EEEE-EEEC-CCEEECSCSEETTEEEC
T ss_pred EEEEEcCCCEEEEEEEecCCCCccccCCCCHHHHHHHHHHH--hCCCCCccc-eeEE-EEEe-CCcEEcccccCCCEEEE
Confidence 78899988877776654221111 112322222222210 000111111 1110 0111 11123467888999999
Q ss_pred cCCCcccCCCCccchHHHHHHHHHHHHHHhhhccC---CchHHHHHHHHHHhHHHHHHHHHHcchhhhh
Q 007716 421 GCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKSWVWQELQRARNYRPAFE 486 (592)
Q Consensus 421 GDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~---~~~l~~Y~~~~~~~~~~~~l~~~r~~~~~~~ 486 (592)
|||||.++|+.|||+|+||+||..||+.|...+.. ...|+.|+++|+.. ....+..++....++.
T Consensus 284 GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~~~~~~L~~Ye~eR~~~-~~~~~~~s~~~~~l~~ 351 (499)
T 2qa2_A 284 GDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSGRAPAGLLDTYHEERHPV-GRRLLMNTQAQGMLFL 351 (499)
T ss_dssp GGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred ecccccCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999887643 46799999998864 6666666665555553
No 9
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.96 E-value=8.9e-28 Score=262.35 Aligned_cols=336 Identities=15% Similarity=0.050 Sum_probs=203.5
Q ss_pred ccccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccC
Q 007716 104 ESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSS 183 (592)
Q Consensus 104 ~~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~ 183 (592)
..+++||+||||||+||++|+.|++. |++|+||||.+.++.. ..+..+.++++ +++..+......... ...
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~------G~~v~vlE~~~~~~~~-~r~~~l~~~~~-~~l~~lGl~~~~~~~-~~~ 78 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLA------GVEVVVLERLVERTGE-SRGLGFTARTM-EVFDQRGILPRFGEV-ETS 78 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHT------TCCEEEEESCCC-CCC-CCSEEECHHHH-HHHHTTTCGGGGCSC-CBC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEeCCCCCCCC-CCcceECHHHH-HHHHHCCCHHHHHhc-ccc
Confidence 34679999999999999999999999 9999999998876542 45667888776 333332211100000 001
Q ss_pred CcEEEeecCCcccCCCC-CCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCc
Q 007716 184 DKFWFLTKDRAFSLPSP-FSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSK 262 (592)
Q Consensus 184 ~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~ 262 (592)
....+ ....++.... ......+.+++..+.+.|.+.+++.|++|+++++|++++.++++ | .|++.+ .+|
T Consensus 79 ~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~----~~g-- 148 (500)
T 2qa1_A 79 TQGHF--GGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAG-V-TVEVRG----PEG-- 148 (500)
T ss_dssp CEEEE--TTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTE-E-EEEEEE----TTE--
T ss_pred ccccc--cceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCe-E-EEEEEc----CCC--
Confidence 11111 0111111110 01112578999999999999999999999999999999988754 4 366554 111
Q ss_pred ccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeeEEEEEeecCCCCCCCcEEEEeccCCCCCCcc
Q 007716 263 KENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYG 342 (592)
Q Consensus 263 ~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~~~~~~~~~~~~~g~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~g 342 (592)
..+++||+||+|||.+|.+|+++ ++.. ....... .++.....+.. .++. .+.+. .+. |
T Consensus 149 ------~~~~~a~~vVgADG~~S~VR~~l----g~~~-~~~~~~~--~~~~~~~~~~~---~~~~-~~~~~---~~~--g 206 (500)
T 2qa1_A 149 ------KHTLRAAYLVGCDGGRSSVRKAA----GFDF-PGTAATM--EMYLADIKGVE---LQPR-MIGET---LPG--G 206 (500)
T ss_dssp ------EEEEEESEEEECCCTTCHHHHHT----TCCC-CEECCCC--EEEEEEEESCC---CCCE-EEEEE---ETT--E
T ss_pred ------CEEEEeCEEEECCCcchHHHHHc----CCCc-CCCccce--EEEEEEEEeCC---CCCc-eEEEE---CCC--c
Confidence 14799999999999999999875 5543 1111111 12222222221 2222 22221 122 4
Q ss_pred eEEEEEcCCCeEEEEEEecccCCC---CCCCcHHHHHHhhcCccccccccCCceeeecceeeecCCccccCcccCCCEEE
Q 007716 343 GSFLYHMNDRQIALGLVVALNYHN---PFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAI 419 (592)
Q Consensus 343 ~~~~~~~~~~~~~vg~~~~~~~~~---~~~~~~~~~~~~~~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~L 419 (592)
..|++|.+++...+.+........ ...++.+..+.++.. +...+...+. .+. ..++. .....++|..+|++|
T Consensus 207 ~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~-~~~-~~~~~-~~~~a~~~~~grv~L 281 (500)
T 2qa1_A 207 MVMVGPLPGGITRIIVCERGTPPQRRETPPSWHEVADAWKRL--TGDDIAHAEP-VWV-SAFGN-ATRQVTEYRRGRVIL 281 (500)
T ss_dssp EEEEEEETTTEEEEEEEETTCCC-----CCCHHHHHHHHHHH--HSCCCTTSEE-EEE-EEEEC-CEEECSCSEETTEEE
T ss_pred EEEEEEcCCCEEEEEEEcCCCCCccccCCCCHHHHHHHHHHh--cCCCCCccce-eEE-EEecc-CcEEccccccCCEEE
Confidence 578899988877776654221111 112322222222210 0001111111 110 01111 112346788899999
Q ss_pred EcCCCcccCCCCccchHHHHHHHHHHHHHHhhhccC---CchHHHHHHHHHHhHHHHHHHHHHcchhhhh
Q 007716 420 IGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKSWVWQELQRARNYRPAFE 486 (592)
Q Consensus 420 iGDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~---~~~l~~Y~~~~~~~~~~~~l~~~r~~~~~~~ 486 (592)
+|||||.++|+.|||+|+||+||..||+.|...+.. ...|+.|+++|+.. ..+.+..++....++.
T Consensus 282 ~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~-~~~~~~~s~~~~~l~~ 350 (500)
T 2qa1_A 282 AGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGTATEELLDSYHSERHAV-GKRLLMNTQAQGLLFL 350 (500)
T ss_dssp CGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred EEccccCCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999887644 35799999998864 6666666655555543
No 10
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.96 E-value=1.2e-28 Score=261.20 Aligned_cols=339 Identities=14% Similarity=0.099 Sum_probs=193.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCC-CcccccCccChHHHHHhhHhhhhcCCCeeeeccCC
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG-AHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g-~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~ 184 (592)
|++||+||||||+||++|+.|++. |++|+||||.+... .....++.+.+.++ +++..+..............
T Consensus 1 m~~dV~IvGaG~aGl~~A~~L~~~------G~~v~v~E~~~~~~~~~~~~~g~l~~~~~-~~l~~lg~~~~~~~~~~~~~ 73 (394)
T 1k0i_A 1 MKTQVAIIGAGPSGLLLGQLLHKA------GIDNVILERQTPDYVLGRIRAGVLEQGMV-DLLREAGVDRRMARDGLVHE 73 (394)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHH------TCCEEEECSSCHHHHHTCCCCCEECHHHH-HHHHHTTCCHHHHHHCEEES
T ss_pred CCccEEEECCCHHHHHHHHHHHHC------CCCEEEEeCCCCCcccCCCceEeECHHHH-HHHHHcCCcHHHHhcCCccc
Confidence 468999999999999999999999 99999999987421 11123445777665 23332211000000000011
Q ss_pred cEEEeecCCcccCCC--CCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEe-ccCcccCCCC
Q 007716 185 KFWFLTKDRAFSLPS--PFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGT-NDMGIAKDGS 261 (592)
Q Consensus 185 ~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~-~d~g~~~~G~ 261 (592)
.+.+........++. .......+.+.+..+.+.|.+.+.+.|++|+++++|+++..++++.+ .|++ .+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~-------- 144 (394)
T 1k0i_A 74 GVEIAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERD-------- 144 (394)
T ss_dssp CEEEEETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEET--------
T ss_pred eEEEEECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecC--------
Confidence 122222111111110 00122356788999999999999989999999999999987643333 4655 33
Q ss_pred cccccccce--EEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeeEEEEE-eecCCCCCCCcEEEEeccCCCC
Q 007716 262 KKENFQRGV--ELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVW-EIDEGKHNPGEILHTLGWPLDQ 338 (592)
Q Consensus 262 ~~~~f~~g~--~i~a~~vI~A~G~~s~vr~~l~~~~~l~~~~~~~~~~~~~g~~~~~-~i~~~~~~~g~~~~~~~~~~~~ 338 (592)
|. +++||+||+|||.+|.+|+++ +... .......+..++..+. .++.. .+. ..+. ..+
T Consensus 145 -------g~~~~~~a~~vV~AdG~~S~vr~~l----~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~----~~~ 205 (394)
T 1k0i_A 145 -------GERLRLDCDYIAGCDGFHGISRQSI----PAER-LKVFERVYPFGWLGLLADTPPV--SHE-LIYA----NHP 205 (394)
T ss_dssp -------TEEEEEECSEEEECCCTTCSTGGGS----CGGG-CEEEEEEEEEEEEEEEESSCCS--CSS-CEEE----CCT
T ss_pred -------CcEEEEEeCEEEECCCCCcHHHHhc----Cccc-cccccccccceeEEEecCCCCC--ccc-eEEE----EcC
Confidence 44 799999999999999999865 3321 0000011112221111 11111 111 1111 112
Q ss_pred CCcceEEEEEcCCCeEEEEEEecccCCCCCCCcHHHHHHhhcC-c-cccccccCCceeeecceeeecCCccccCcccCCC
Q 007716 339 KTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFKHH-P-AIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPG 416 (592)
Q Consensus 339 ~~~g~~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~-p-~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~ 416 (592)
+ |..|+++..++...+.+...........++.+.++.+... + .+...+........ ..++...+ ..++|..+|
T Consensus 206 ~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~gr 280 (394)
T 1k0i_A 206 R--GFALCSQRSATRSQYYVQVPLSEKVEDWSDERFWTELKARLPSEVAEKLVTGPSLEK--SIAPLRSF-VVEPMQHGR 280 (394)
T ss_dssp T--CCEEEEEEETTEEEEEEEECTTCCGGGCCHHHHHHHHHHTSCHHHHHHCCCCCEEEE--EEEEEEEE-EEECSEETT
T ss_pred C--ceEEEEecCCCcEEEEEEeCCCCCccccCHHHHHHHHHHhhCcccccccccCcceee--EEEEhhhh-hccccccCC
Confidence 2 3355666556666666554332111112222222233221 1 11111111111111 11121111 234677899
Q ss_pred EEEEcCCCcccCCCCccchHHHHHHHHHHHHHHhhhcc--CCchHHHHHHHHHHhHHHHHHHHHHcchhhh
Q 007716 417 GAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH--EDSNMEIYWDTLQKSWVWQELQRARNYRPAF 485 (592)
Q Consensus 417 v~LiGDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~--~~~~l~~Y~~~~~~~~~~~~l~~~r~~~~~~ 485 (592)
++|||||||.++|+.|||+|+||+||..||++|...+. ....|+.|++.++.+ +...+..++....++
T Consensus 281 v~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~~~~~~L~~Y~~~r~~~-~~~~~~~s~~~~~~~ 350 (394)
T 1k0i_A 281 LFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREGRGELLERYSAICLRR-IWKAERFSWWMTSVL 350 (394)
T ss_dssp EEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHHHCCGGGGGGHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred EEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHH-HHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999987653 246899999998865 666666666554444
No 11
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.96 E-value=6.7e-28 Score=271.62 Aligned_cols=351 Identities=16% Similarity=0.150 Sum_probs=204.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHH-----hhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeee
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQ-----LCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVP 180 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~-----~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~ 180 (592)
.++||+||||||+||++|+.|++ . |++|+||||.+.... ...+..+.++++ +++..+..........
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~------Gi~v~viE~~~~~~~-~gra~~l~~~tl-e~l~~lGl~~~l~~~~ 78 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKP------DLKVRIIDKRSTKVY-NGQADGLQCRTL-ESLKNLGLADKILSEA 78 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHST------TCCEEEECSSSSCCC-SCSCCEECHHHH-HHHHTTTCHHHHHTTC
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccC------CCCEEEEeCCCCCCC-CCceeEEChHHH-HHHHHCCCHHHHHHhc
Confidence 36899999999999999999999 8 999999999875432 234556788776 4433322110000000
Q ss_pred ccCCcEEEeecC--Cccc----CC---CCCCCCCcEEEcHHHHHHHHHHHHHHcC---CEEecCceEEEEEEcC------
Q 007716 181 VSSDKFWFLTKD--RAFS----LP---SPFSNRGNYVISLSQLVRWLGGKAEELG---VEIYPGFAASEILYDA------ 242 (592)
Q Consensus 181 ~~~~~~~~~~~~--~~~~----~~---~~~~~~~~~~v~~~~l~~~L~~~a~~~G---v~i~~g~~v~~i~~~~------ 242 (592)
.....+.+.... ..+. ++ ........+.+++..+.+.|.+.+++.| ++|.+++.++++..++
T Consensus 79 ~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~ 158 (665)
T 1pn0_A 79 NDMSTIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDP 158 (665)
T ss_dssp BCCCEEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCT
T ss_pred cccceEEEEeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccC
Confidence 011112222111 1110 11 0112223577999999999999999887 9999999999998875
Q ss_pred -CCcEEEEEeccCc-----------ccCCCCccccc----------------ccc--eEEEcCEEEEecCCCCcchHHHH
Q 007716 243 -DNKVIGIGTNDMG-----------IAKDGSKKENF----------------QRG--VELRGRITLLAEGCRGSLSEKLI 292 (592)
Q Consensus 243 -~g~v~~V~~~d~g-----------~~~~G~~~~~f----------------~~g--~~i~a~~vI~A~G~~s~vr~~l~ 292 (592)
+..| .|++.+.. ...+|-...++ .+| .+++||+||+|||++|.||+++
T Consensus 159 ~~~~V-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~l- 236 (665)
T 1pn0_A 159 EAYPV-TMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTL- 236 (665)
T ss_dssp TCCCE-EEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHH-
T ss_pred CCCCE-EEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhc-
Confidence 1223 45443210 00011000000 123 6799999999999999999987
Q ss_pred HHcCCCcccccCcccceeeEEEEEeecCCCCCCC--cEEEEeccCCCCCCcceEEEEEcCCCeEEEEEEecccC------
Q 007716 293 KNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPG--EILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNY------ 364 (592)
Q Consensus 293 ~~~~l~~~~~~~~~~~~~g~~~~~~i~~~~~~~g--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~~~------ 364 (592)
++... .. ......++.. +......+. ....... .+ .|..+++|.+++.+.+.+......
T Consensus 237 ---g~~~~-g~-~~~~~~~v~d---~~~~~~~p~~~~~~~~~~---~~--~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~ 303 (665)
T 1pn0_A 237 ---GFEMI-GE-QTDYIWGVLD---AVPASNFPDIRSRCAIHS---AE--SGSIMIIPRENNLVRFYVQLQARAEKGGRV 303 (665)
T ss_dssp ---TCCCE-EE-EEEEEEEEEE---EEEECCCTTTTSEEEEEC---SS--SCEEEEEECSTTCEEEEEEECC--------
T ss_pred ---CCCCC-CC-CccEEEEEEE---EEECCCCCCcceEEEEEe---CC--CceEEEEEcCCCEEEEEEEeCCcccccccc
Confidence 55421 11 1111112222 111111121 1111111 11 255788999888777766554321
Q ss_pred CCCCCCcHHHHHHhhc--CccccccccCCceeeecceeeecCCccccCccc-CCCEEEEcCCCcccCCCCccchHHHHHH
Q 007716 365 HNPFLNPYEEFQKFKH--HPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPV-FPGGAIIGCAAGFLNVPKIKGTHTAMKS 441 (592)
Q Consensus 365 ~~~~~~~~~~~~~~~~--~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~-~~~v~LiGDAA~~~~P~~g~G~~~Am~d 441 (592)
.....++.+..+.++. .|...++ +.+.+. ...+ .+....++|. .+||+|+|||||.++|+.|||+|+||+|
T Consensus 304 ~~~~~t~e~~~~~~~~~~~~~~~~~----~~~~~~-~~~~-~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~D 377 (665)
T 1pn0_A 304 DRTKFTPEVVIANAKKIFHPYTFDV----QQLDWF-TAYH-IGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMD 377 (665)
T ss_dssp --CCCCHHHHHHHHHHHHTTSCCEE----EEEEEE-EEEE-EEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHHhCcccCce----eeEEEE-Eeee-ccceehhhcccCCCEEEEECccccCCCcccCCcchhHHH
Confidence 0112333333233321 1211111 111110 0111 1112346787 6999999999999999999999999999
Q ss_pred HHHHHHHHhhhccC---CchHHHHHHHHHHhHHHHHHHHHHcchhhhh
Q 007716 442 GMLAAEAGFGVLHE---DSNMEIYWDTLQKSWVWQELQRARNYRPAFE 486 (592)
Q Consensus 442 g~~aA~~l~~~~~~---~~~l~~Y~~~~~~~~~~~~l~~~r~~~~~~~ 486 (592)
|..||+.|...++. ...|+.|+++|+.. ..+.+..++.+..+|.
T Consensus 378 A~nLawkLa~vl~g~a~~~lL~tYe~eR~p~-a~~~i~~s~~~~~l~~ 424 (665)
T 1pn0_A 378 TYNLGWKLGLVLTGRAKRDILKTYEEERQPF-AQALIDFDHQFSRLFS 424 (665)
T ss_dssp HHHHHHHHHHHHTTCBCGGGGHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence 99999999887654 46899999999864 6667777777666663
No 12
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.96 E-value=5.5e-28 Score=267.59 Aligned_cols=334 Identities=14% Similarity=0.069 Sum_probs=195.7
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhh---hhcCCCeeeec
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQW---KQEEAPIRVPV 181 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~---~~~~~~~~~~~ 181 (592)
.+++||+||||||+||++|+.|++. |++|+||||.+.+.. ...+..+.++++. ++..+ ........ ..
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~~------G~~V~VlEr~~~~~~-~~r~~~l~~~s~~-~l~~lGl~~~l~~~~~-~~ 117 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRAG------GVGALVLEKLVEPVG-HDRAGALHIRTVE-TLDLRGLLDRFLEGTQ-VA 117 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHHT------TCCEEEEBSCSSCCC-SSSCCCBCHHHHH-HHHTTTCHHHHTTSCC-BC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEcCCCCCCC-CceEEEECHHHHH-HHHHcCChHHHHhcCc-cc
Confidence 3679999999999999999999999 999999999876543 3456777877663 33322 11110000 00
Q ss_pred cCCcEEEeecCC--cccCCCC-CCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccC
Q 007716 182 SSDKFWFLTKDR--AFSLPSP-FSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAK 258 (592)
Q Consensus 182 ~~~~~~~~~~~~--~~~~~~~-~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~ 258 (592)
. . ..+.... .+..... ......+.+++..+.+.|.+.+++.|++|+++++|++++.++++ + .|++.+ .
T Consensus 118 ~--~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~-v-~v~~~~----~ 188 (570)
T 3fmw_A 118 K--G-LPFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEA-V-EVTVAG----P 188 (570)
T ss_dssp S--B-CCBTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSC-E-EEEEEE----T
T ss_pred C--C-ceeCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCe-E-EEEEEe----C
Confidence 0 0 0000000 1111111 11223567899999999999999999999999999999888755 3 355421 0
Q ss_pred CCCcccccccc-eEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeeEEEEEeecCCCCCCCcEEEEeccCCC
Q 007716 259 DGSKKENFQRG-VELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLD 337 (592)
Q Consensus 259 ~G~~~~~f~~g-~~i~a~~vI~A~G~~s~vr~~l~~~~~l~~~~~~~~~~~~~g~~~~~~i~~~~~~~g~~~~~~~~~~~ 337 (592)
+| .+++||+||+|||.+|.+|+++ ++.. ....+.. .++.. .+...... . .+.|...
T Consensus 189 ---------~G~~~~~a~~vV~ADG~~S~vR~~l----Gi~~-~~~~~~~--~~~~~--~v~~~~~~--~---~~~~~~~ 245 (570)
T 3fmw_A 189 ---------SGPYPVRARYGVGCDGGRSTVRRLA----ADRF-PGTEATV--RALIG--YVTTPERE--V---PRRWERT 245 (570)
T ss_dssp ---------TEEEEEEESEEEECSCSSCHHHHHT----TCCC-CCCCCCE--EEEEE--ECCCCSCS--S---CCCCCCC
T ss_pred ---------CCcEEEEeCEEEEcCCCCchHHHHc----CCCC-ccceeee--EEEEE--EEEecCCC--c---ceEEEec
Confidence 15 6899999999999999999865 6553 1111111 12211 22211111 0 1122111
Q ss_pred CCCcceEEE-EEcCCCeE-EEEEEecccCC---CCCCCcHHHHHHhhcCccccccccCCceeeecceeeecCCccccCcc
Q 007716 338 QKTYGGSFL-YHMNDRQI-ALGLVVALNYH---NPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYP 412 (592)
Q Consensus 338 ~~~~g~~~~-~~~~~~~~-~vg~~~~~~~~---~~~~~~~~~~~~~~~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~ 412 (592)
..|..|+ +|.+++.. ++.+....... ....+..+..+.+... +...+...+...+. ..++. .....++|
T Consensus 246 --~~G~~~~~~P~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~-~~~~~-~~~~a~~~ 319 (570)
T 3fmw_A 246 --PDGILVLAFPPEGGLGPGWSSSSTGHSPAADEGPVTLEDLGAAVARV--RGTPLTLTEPVSWL-SRFGD-ASRQAKRY 319 (570)
T ss_dssp --CSSCEEECCCC------CEEEEEESCC-----CCCCHHHHHHHTTSS--SSCCCCCCSCCEEE-EEECC-CCEECSCS
T ss_pred --CCEEEEEEeecCCCeEEEEEEEeCCCCccccccCCCHHHHHHHHHHH--hhcccccceeeeee-EEeec-cccccccc
Confidence 2244555 68877766 56554432111 1112322222333321 11111111111110 01111 12235678
Q ss_pred cCCCEEEEcCCCcccCCCCccchHHHHHHHHHHHHHHhhhccC---CchHHHHHHHHHHhHHHHHHHHHHcchhhhh
Q 007716 413 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKSWVWQELQRARNYRPAFE 486 (592)
Q Consensus 413 ~~~~v~LiGDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~---~~~l~~Y~~~~~~~~~~~~l~~~r~~~~~~~ 486 (592)
..+|++|+|||||.++|+.|||+|+||+||..||+.|...+.. ...|+.|+++++.. ....+..++.+..+|.
T Consensus 320 ~~grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~g~~~~~lL~~Ye~eR~~~-~~~~~~~s~~~~~l~~ 395 (570)
T 3fmw_A 320 RSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRGWGSEELLDTYHDERHPV-AERVLLNTRAQLALMR 395 (570)
T ss_dssp EETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHSC
T ss_pred ccCCEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence 8899999999999999999999999999999999999987643 36799999999865 6677777776666664
No 13
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.96 E-value=2.5e-28 Score=257.59 Aligned_cols=327 Identities=15% Similarity=0.106 Sum_probs=194.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.+||+||||||+|+++|+.|++. |++|+||||.+.++. ...|..+.+..+. ++..+...............+
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~------G~~v~viE~~~~~~~-~~~~~~l~~~~~~-~l~~~g~~~~~~~~~~~~~~~ 82 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQN------GWDVRLHEKSSELRA-FGAGIYLWHNGLR-VLEGLGALDDVLQGSHTPPTY 82 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSCCC-CSSEEEEEHHHHH-HHHHTTCHHHHHTTCBCCSCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHC------CCCEEEEecCCCCCC-CCceEEeCccHHH-HHHHcCCHHHHHhhCCCccce
Confidence 58999999999999999999999 999999999887653 2334455565542 222221100000000111222
Q ss_pred EEeecCCcc-cCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 187 WFLTKDRAF-SLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 187 ~~~~~~~~~-~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
.+...+..+ .++.. ....+.+++..|.+.|.+.+++.||+|+++++|++++. ++ .|++.+
T Consensus 83 ~~~~~g~~~~~~~~~--~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~------------ 143 (379)
T 3alj_A 83 ETWMHNKSVSKETFN--GLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQT------------ 143 (379)
T ss_dssp EEEETTEEEEEECGG--GCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETT------------
T ss_pred EEEeCCceeeeccCC--CCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECC------------
Confidence 222221110 11110 22368899999999999999999999999999999976 35 366654
Q ss_pred cccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCccccee-eEEEEEeecC---CCCCCCcEEEEeccCCCCCCc
Q 007716 266 FQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYAL-GIKEVWEIDE---GKHNPGEILHTLGWPLDQKTY 341 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~~~~~~~~~~~~~-g~~~~~~i~~---~~~~~g~~~~~~~~~~~~~~~ 341 (592)
|.+++||+||+|||.+|.+|+.+ +... .+...+. .+........ ....++...+.+.+ ..++
T Consensus 144 ---g~~~~ad~vV~AdG~~s~vr~~l----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 209 (379)
T 3alj_A 144 ---GEVLEADLIVGADGVGSKVRDSI----GFKQ----DRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNF-WPRV-- 209 (379)
T ss_dssp ---SCEEECSEEEECCCTTCHHHHHH----CCCE----EEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECC-SSSC--
T ss_pred ---CCEEEcCEEEECCCccHHHHHHh----cCCC----CcCcCCcEEEEEEechhhccCCcCCcccccccceE-ECCC--
Confidence 56899999999999999999876 3321 1122221 1222222210 11112333332211 1222
Q ss_pred ceEEEEEcCCCeEEEEEEecccCCCCCCCcHHHHHHhh-cCccccccccCCceeeecceeeecCCccccCcccCCCEEEE
Q 007716 342 GGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFK-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAII 420 (592)
Q Consensus 342 g~~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~-~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~Li 420 (592)
+..|++|.+++...+.+....+...+ ....+.+..|. ..+.+.++++......... .+......+++|..+|++||
T Consensus 210 ~~~~~~p~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~rv~lv 286 (379)
T 3alj_A 210 QRILYSPCNENELYLGLMAPAADPRG-SSVPIDLEVWVEMFPFLEPCLIEAAKLKTAR--YDKYETTKLDSWTRGKVALV 286 (379)
T ss_dssp CEEEEEECSSSEEEEEEEECTTCTTT-TCSSCCHHHHHHHCGGGHHHHHHHHTCTTCC--EEEEEEEEESCSEETTEEEC
T ss_pred CEEEEEECCCCcEEEEEEecCCCCCH-HHHHHHHhcCCchhccHHHHHhhCCccceEE--ecccccCCCCCcccCcEEEE
Confidence 45789999988877766654311111 00011122221 1221223332111000000 01111123467888999999
Q ss_pred cCCCcccCCCCccchHHHHHHHHHHHHHHhhhccCCchHHHHHHHHHHhHHHHHHHHH
Q 007716 421 GCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKSWVWQELQRA 478 (592)
Q Consensus 421 GDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~~~~l~~Y~~~~~~~~~~~~l~~~ 478 (592)
|||||.++|+.|||+++||+||..||++|.........|+.|++.|+.. +.+.+..+
T Consensus 287 GDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~~~~l~~Y~~~r~~~-~~~~~~~s 343 (379)
T 3alj_A 287 GDAAHAMCPALAQGAGCAMVNAFSLSQDLEEGSSVEDALVAWETRIRPI-TDRCQALS 343 (379)
T ss_dssp THHHHCCCGGGSCHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred EcccCCCCcchhhhHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHH-HHHHHHHh
Confidence 9999999999999999999999999999976421135799999999865 55555554
No 14
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.96 E-value=2.2e-28 Score=259.79 Aligned_cols=332 Identities=15% Similarity=0.084 Sum_probs=203.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHh------hhhcCCCeee
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQ------WKQEEAPIRV 179 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~------~~~~~~~~~~ 179 (592)
+++||+||||||+|+++|+.|++. |++|+||||.+.+. ...++..+.+..+. ++.. +.....+..
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~------G~~V~viE~~~~~~-~~~~~~~l~~~~~~-~l~~~g~~~~~~~~~~~~~- 75 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQ------GHRVVVVEQARRER-AINGADLLKPAGIR-VVEAAGLLAEVTRRGGRVR- 75 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSCCC----CCCCEECHHHHH-HHHHTTCHHHHHHTTCEEE-
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC------CCcEEEEeCCCCCC-ccCceeeECchHHH-HHHHcCcHHHHHHhCCCcc-
Confidence 358999999999999999999999 99999999987652 22356667766542 2222 111111111
Q ss_pred eccCCcEEEeecCC----cccCCCCCCCCCcEEEcHHHHHHHHHHHHHHc-CCEEecCceEEEEEEcCCCcEE-EEEecc
Q 007716 180 PVSSDKFWFLTKDR----AFSLPSPFSNRGNYVISLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVI-GIGTND 253 (592)
Q Consensus 180 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~-Gv~i~~g~~v~~i~~~~~g~v~-~V~~~d 253 (592)
.+.+..... .+...........+.+++..|.+.|.+.+++. |++|+++++|++++.++++ ++ .|++.+
T Consensus 76 -----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~g~v~~~~ 149 (399)
T 2x3n_A 76 -----HELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-AIDQVRLND 149 (399)
T ss_dssp -----CEEEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-CEEEEEETT
T ss_pred -----eeEEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-eEEEEEECC
Confidence 111111111 01111000111257899999999999999998 9999999999999987754 32 466654
Q ss_pred CcccCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccce---eeEEEEEeecCCCCCCCcEEE
Q 007716 254 MGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYA---LGIKEVWEIDEGKHNPGEILH 330 (592)
Q Consensus 254 ~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~~~~~~~~~~~~---~g~~~~~~i~~~~~~~g~~~~ 330 (592)
|.+++||+||+|||.+|.+|+.+ ++.. ....+ .++ .++... ++.. .+... .
T Consensus 150 ---------------g~~~~ad~vV~AdG~~s~vr~~l----g~~~-~~~~p-~~~~~~~~~~~~--~~~~--~~~~~-~ 203 (399)
T 2x3n_A 150 ---------------GRVLRPRVVVGADGIASYVRRRL----LDID-VERRP-YPSPMLVGTFAL--APCV--AERNR-L 203 (399)
T ss_dssp ---------------SCEEEEEEEEECCCTTCHHHHHT----SCCC-CCCCC-CSSCEEEEEEEC--CHHH--HHCEE-E
T ss_pred ---------------CCEEECCEEEECCCCChHHHHHh----CCCc-cccCC-CCCCceEEEEEE--ecCC--CCCcc-E
Confidence 56899999999999999988854 5542 01100 122 222221 2111 11112 2
Q ss_pred EeccCCCCCCcceEEEEEcCCCeEEEEEEecccCCCC---CCCcHHHHHHhhc-Ccccc-ccccCCceeeecceeeecCC
Q 007716 331 TLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNP---FLNPYEEFQKFKH-HPAIK-PLLEGGTVVQYGARTLNEGG 405 (592)
Q Consensus 331 ~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~~~~~~---~~~~~~~~~~~~~-~p~i~-~~l~~~~~~~~~~~~i~~gg 405 (592)
.++ +. -|..|++|.+++.+.+.+....+.... ..++.+..+.+.. .+.+. ..++...... ....+...
T Consensus 204 ~~~----~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 276 (399)
T 2x3n_A 204 YVD----SQ-GGLAYFYPIGFDRARLVVSFPREEARELMADTRGESLRRRLQRFVGDESAEAIAAVTGTS--RFKGIPIG 276 (399)
T ss_dssp EEC----TT-SCEEEEEEETTTEEEEEEECCHHHHHHHHHSTTSHHHHHHHHTTCCGGGHHHHHTCCCST--TCEECCCC
T ss_pred EEc----CC-CcEEEEEEcCCCEEEEEEEeCccccccccccCCHHHHHHHHhhcCCcchhhHHhcCCccc--eEEechhh
Confidence 221 20 245788998876666655332210000 0122222233332 23331 2222111000 01122222
Q ss_pred ccccCcccCCCEEEEcCCCcccCCCCccchHHHHHHHHHHHHHHhhhccC----CchHHHHHHHHHHhHHHHHHHHHHcc
Q 007716 406 LQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE----DSNMEIYWDTLQKSWVWQELQRARNY 481 (592)
Q Consensus 406 ~~~~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~----~~~l~~Y~~~~~~~~~~~~l~~~r~~ 481 (592)
....++|..+|++|||||||.++|+.|||+++||+||..||++|.+.++. ..+|+.|++.++.. +...+..++.+
T Consensus 277 ~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~~~~~~~~l~~Y~~~r~~~-~~~~~~~s~~~ 355 (399)
T 2x3n_A 277 YLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFPV-NQAIVSYGHAL 355 (399)
T ss_dssp CEECSCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred cccccccccCcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHhccH-HHHHHHHHHHh
Confidence 23456788899999999999999999999999999999999999987642 35799999999875 77788888887
Q ss_pred hhhhh
Q 007716 482 RPAFE 486 (592)
Q Consensus 482 ~~~~~ 486 (592)
..++.
T Consensus 356 ~~~~~ 360 (399)
T 2x3n_A 356 ATSLE 360 (399)
T ss_dssp HHHTT
T ss_pred hhhhc
Confidence 77774
No 15
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.96 E-value=1.8e-27 Score=267.52 Aligned_cols=346 Identities=14% Similarity=0.135 Sum_probs=199.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHH-hhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCC
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQ-LCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~-~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~ 184 (592)
.++|||||||||+||++|+.|++ . |++|+||||.+.++. ...+..+.++++ +++..+..............
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~------G~~V~viEr~~~~~~-~g~a~~l~~~t~-e~l~~lGl~~~~~~~~~~~~ 102 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFP------DIRTCIVEQKEGPME-LGQADGIACRTM-EMFEAFEFADSILKEACWIN 102 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCT------TSCEEEECSSSSCCS-SCSCCEECHHHH-HHHHHTTCHHHHHHHSEEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhC------CCCEEEEeCCCCCCC-CCceeeeCHHHH-HHHHHcCcHHHHHHhccccc
Confidence 46899999999999999999999 8 999999999876543 234567777776 33333221100000000001
Q ss_pred cEEEeec----CCcc----cCC---CCCCCCCcEEEcHHHHHHHHHHHHHHcCC--EEecCceEEEEEEcCC--CcEEEE
Q 007716 185 KFWFLTK----DRAF----SLP---SPFSNRGNYVISLSQLVRWLGGKAEELGV--EIYPGFAASEILYDAD--NKVIGI 249 (592)
Q Consensus 185 ~~~~~~~----~~~~----~~~---~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv--~i~~g~~v~~i~~~~~--g~v~~V 249 (592)
.+.+... ...+ .++ ........+.+++..+.+.|.+.+++.|+ +|+++++|+++..+++ +..+.|
T Consensus 103 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v 182 (639)
T 2dkh_A 103 DVTFWKPDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTV 182 (639)
T ss_dssp EEEEEEECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEE
T ss_pred ceEEECCCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEE
Confidence 1111111 0111 011 01112235678999999999999999987 9999999999998763 222345
Q ss_pred EeccCcccCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeeEEEEEeecCCCCCCCcEE
Q 007716 250 GTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEIL 329 (592)
Q Consensus 250 ~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~~~~~~~~~~~~~g~~~~~~i~~~~~~~g~~~ 329 (592)
++.+.+...+|+ ..+++||+||+|||++|.+|+++ ++... ..... ...++..+.......... ...
T Consensus 183 ~~~~~~~~~~G~-------~~~i~a~~vVgADG~~S~vR~~l----g~~~~-g~~~~-~~~~~~~~~~~~~~p~~~-~~~ 248 (639)
T 2dkh_A 183 TLERCDAAHAGQ-------IETVQARYVVGCDGARSNVRRAI----GRQLV-GDSAN-QAWGVMDVLAVTDFPDVR-YKV 248 (639)
T ss_dssp EEEECSGGGTTC-------EEEEEEEEEEECCCTTCHHHHHT----TCCCE-ECSCS-CCEEEEEEEEEECCTTTT-SEE
T ss_pred EEEeccccCCCC-------eEEEEeCEEEECCCcchHHHHHh----CCCCC-CCCcc-ceEEEEEEEEccCCCccc-eeE
Confidence 554210001232 26899999999999999999876 55431 11111 112332221111100011 111
Q ss_pred EEeccCCCCCCcceEEEEEcCCC-eEEEEEEecc--cC---CCCCCCcHHHHHHhhc--CccccccccCCceeeecceee
Q 007716 330 HTLGWPLDQKTYGGSFLYHMNDR-QIALGLVVAL--NY---HNPFLNPYEEFQKFKH--HPAIKPLLEGGTVVQYGARTL 401 (592)
Q Consensus 330 ~~~~~~~~~~~~g~~~~~~~~~~-~~~vg~~~~~--~~---~~~~~~~~~~~~~~~~--~p~i~~~l~~~~~~~~~~~~i 401 (592)
... . + .|..|++|.+++ .+.+.+.... +. .....++.+..+.++. .|...+ + ..+.+. ...
T Consensus 249 ~~~-~---~--~g~~~~~P~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~-~---~~~~~~-~~~ 317 (639)
T 2dkh_A 249 AIQ-S---E--QGNVLIIPREGGHLVRFYVEMDKLDADERVASRNITVEQLIATAQRVLHPYKLE-V---KNVPWW-SVY 317 (639)
T ss_dssp EEE-E---T--TEEEEEEECTTSSCEEEEEECC-----------CCCHHHHHHHHHHHHTTSCEE-E---EEEEEE-EEE
T ss_pred EEE-c---C--CceEEEEEcCCCcEEEEEEECCCcCcccccccCCCCHHHHHHHHHHHhCcccCc-c---eeeeEE-Eec
Confidence 111 1 1 255788998877 6666555432 11 1111233222222221 121000 0 111110 011
Q ss_pred ecCCccccCccc------------CCCEEEEcCCCcccCCCCccchHHHHHHHHHHHHHHhhhccC---CchHHHHHHHH
Q 007716 402 NEGGLQSIPYPV------------FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTL 466 (592)
Q Consensus 402 ~~gg~~~~p~~~------------~~~v~LiGDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~---~~~l~~Y~~~~ 466 (592)
. .+....++|. .+||+|+|||||.++|+.|||+|+||+||..||+.|...+.. ...|+.|+++|
T Consensus 318 ~-~~~~~a~~~~~~~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~a~~~lL~~Ye~eR 396 (639)
T 2dkh_A 318 E-IGQRICAKYDDVVDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQCAPELLHTYSSER 396 (639)
T ss_dssp C-CCCEECSCSBSCCCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTSBCGGGGHHHHHHH
T ss_pred c-cccchhhhhhccccccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 1 1111223444 789999999999999999999999999999999999887654 36799999999
Q ss_pred HHhHHHHHHHHHHcchhhhh
Q 007716 467 QKSWVWQELQRARNYRPAFE 486 (592)
Q Consensus 467 ~~~~~~~~l~~~r~~~~~~~ 486 (592)
+.. ..+.+..++.+..+|.
T Consensus 397 ~~~-a~~~~~~s~~~~~~~~ 415 (639)
T 2dkh_A 397 QVV-AQQLIDFDREWAKMFS 415 (639)
T ss_dssp HHH-HHHHHHHHHHSCC---
T ss_pred HHH-HHHHHHHHHHHHHHhc
Confidence 874 7777777777766664
No 16
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.96 E-value=3.2e-27 Score=260.60 Aligned_cols=332 Identities=19% Similarity=0.141 Sum_probs=197.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhh------hcCCCeee
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWK------QEEAPIRV 179 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~------~~~~~~~~ 179 (592)
+++||+||||||+||++|+.|++. |++|+||||.+.++. ...+..+.++++ +++..+. ....+...
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~------G~~v~viEr~~~~~~-~~~~~~l~~~~~-~~l~~lGl~~~~~~~~~~~~~ 75 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQ------GVRVLVVERRPGLSP-YPRAAGQNPRTM-ELLRIGGVADEVVRADDIRGT 75 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT------TCCEEEECSSSSCCC-CCCSCCBCHHHH-HHHHHTTCHHHHHHSCCSSCT
T ss_pred ccCcEEEECcCHHHHHHHHHHHHC------CCCEEEEeCCCCCCC-CCccceECHHHH-HHHHHcCCHHHHHhhCCCccc
Confidence 469999999999999999999999 999999999987653 345677888776 3333221 11111110
Q ss_pred e----------ccCCcEEEeecCCcccC---C-CCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCC-
Q 007716 180 P----------VSSDKFWFLTKDRAFSL---P-SPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADN- 244 (592)
Q Consensus 180 ~----------~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g- 244 (592)
. .....+..+.. .++. . ........+.+++..|.+.|.+.+++.|++|+++++|++++.++++
T Consensus 76 ~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~ 153 (535)
T 3ihg_A 76 QGDFVIRLAESVRGEILRTVSE--SFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDA 153 (535)
T ss_dssp TSCCEEEEESSSSSCEEEEEES--CHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGG
T ss_pred ccceeeeEEeccCCceeeeccc--cccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCc
Confidence 0 00111110000 0000 0 0011223567899999999999999999999999999999988752
Q ss_pred --cEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeeEEEEEeecCCC
Q 007716 245 --KVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGK 322 (592)
Q Consensus 245 --~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~~~~~~~~~~~~~g~~~~~~i~~~~ 322 (592)
.+ .|++.+ .+| ..+++||+||+|||.+|.+|+++ ++... ........+.+ .+......
T Consensus 154 ~~~v-~v~~~~----~~~--------~~~i~a~~vV~AdG~~S~vR~~l----gi~~~-~~~~~~~~~~~--~~~~~~~~ 213 (535)
T 3ihg_A 154 GAGV-TARLAG----PDG--------EYDLRAGYLVGADGNRSLVRESL----GIGRY-GHGTLTHMVGV--IFDADLSG 213 (535)
T ss_dssp CSEE-EEEEEE----TTE--------EEEEEEEEEEECCCTTCHHHHHT----TCCEE-EEEEEEEEEEE--EEECCGGG
T ss_pred cccE-EEEEEc----CCC--------eEEEEeCEEEECCCCcchHHHHc----CCCcC-CCCccceEEEE--EEeccChh
Confidence 23 355443 111 26899999999999999999865 66531 11111111111 12221111
Q ss_pred C--CCCcEEEEeccCCCCCCcceEEEEEcCC-CeEEEEEEecccCCC--CCCCcHHHHHHhhc---CccccccccCCcee
Q 007716 323 H--NPGEILHTLGWPLDQKTYGGSFLYHMND-RQIALGLVVALNYHN--PFLNPYEEFQKFKH---HPAIKPLLEGGTVV 394 (592)
Q Consensus 323 ~--~~g~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~vg~~~~~~~~~--~~~~~~~~~~~~~~---~p~i~~~l~~~~~~ 394 (592)
. ......+++. .+. +..+++|..+ +...+.+....+... +..++.+..+.++. .+.... +..
T Consensus 214 ~~~~~~~~~~~~~---~p~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~~~~-----~~~ 283 (535)
T 3ihg_A 214 IMEPGTTGWYYLH---HPE--FKGTFGPTDRPDRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPEVKP-----ELV 283 (535)
T ss_dssp TSCTTCCEEEEEE---CSS--CEEEEEECSSTTEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSSCCC-----EEE
T ss_pred hccCCceEEEEEE---CCC--ceEEEEEecCCCEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCCCce-----eEE
Confidence 1 1112222222 222 3467788765 555554444332111 11222222222221 111110 111
Q ss_pred eecceeeecCCccccCcccCCCEEEEcCCCcccCCCCccchHHHHHHHHHHHHHHhhhccC---CchHHHHHHHHHHhHH
Q 007716 395 QYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKSWV 471 (592)
Q Consensus 395 ~~~~~~i~~gg~~~~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~---~~~l~~Y~~~~~~~~~ 471 (592)
.... .+. .....++|..+|++|+|||||.++|+.|||+|+||+||..||+.|...++. ...|+.|+++|+.. .
T Consensus 284 ~~~~--~~~-~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~~~~~lL~~Ye~eR~p~-a 359 (535)
T 3ihg_A 284 DIQG--WEM-AARIAERWREGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQAGAGLLDTYEDERKVA-A 359 (535)
T ss_dssp EEEE--EEE-EEEEESCSEETTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHHHHHH-H
T ss_pred EeeE--eee-eEEEECccccCCEEEEecccccCCCccCCccccccccHHHHHHHHHHHhcCCCcHHHHHhhHHHHHHH-H
Confidence 1100 110 112346788899999999999999999999999999999999999987644 46799999999975 5
Q ss_pred HHHHHHHHcc
Q 007716 472 WQELQRARNY 481 (592)
Q Consensus 472 ~~~l~~~r~~ 481 (592)
...+..++..
T Consensus 360 ~~~~~~s~~~ 369 (535)
T 3ihg_A 360 ELVVAEALAI 369 (535)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 5555555543
No 17
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.96 E-value=2.7e-27 Score=252.46 Aligned_cols=327 Identities=18% Similarity=0.218 Sum_probs=191.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCc-EEEEcCCCCCCCcccccCccChHHHHHhhHhhh------hcCCCeee
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLS-VCVVEKGAEVGAHIISGNVFEPRALNELLPQWK------QEEAPIRV 179 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~-V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~------~~~~~~~~ 179 (592)
++||+||||||+||++|+.|++. |++ |+||||.+.++. ...|..+.+.++.. +..+. ....+.
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~------G~~~v~v~E~~~~~~~-~g~g~~l~~~~~~~-l~~lg~~~~l~~~~~~~-- 73 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQA------GIGKVTLLESSSEIRP-LGVGINIQPAAVEA-LAELGLGPALAATAIPT-- 73 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCSEEEEEESSSSCCC-CSCEEEECHHHHHH-HHHTTCHHHHHHHSEEE--
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCCCccc-ceeEEEEChHHHHH-HHHCCChHHHHhhCCCc--
Confidence 58999999999999999999999 999 999999876543 23455566766532 22221 111111
Q ss_pred eccCCcEEEeecCCcc--cCCC---CCCCCCcEEEcHHHHHHHHHHHHHH-cC-CEEecCceEEEEEEcCCCcEEEEEec
Q 007716 180 PVSSDKFWFLTKDRAF--SLPS---PFSNRGNYVISLSQLVRWLGGKAEE-LG-VEIYPGFAASEILYDADNKVIGIGTN 252 (592)
Q Consensus 180 ~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~v~~~~l~~~L~~~a~~-~G-v~i~~g~~v~~i~~~~~g~v~~V~~~ 252 (592)
..+.+....... ..+. .......+.++|..|.+.|.+.+++ .| ++|+++++|+++.. +++ + .|++.
T Consensus 74 ----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~-v-~v~~~ 146 (410)
T 3c96_A 74 ----HELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG-R-VLIGA 146 (410)
T ss_dssp ----CEEEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT-E-EEEEE
T ss_pred ----ceEEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc-c-EEEEe
Confidence 112222111110 0000 0011235789999999999999987 46 68999999999988 544 3 35543
Q ss_pred cCcccCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceee-EEEEEeecCCCCCCCcEEEE
Q 007716 253 DMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALG-IKEVWEIDEGKHNPGEILHT 331 (592)
Q Consensus 253 d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~~~~~~~~~~~~~g-~~~~~~i~~~~~~~g~~~~~ 331 (592)
+ ..+|+. .+++||+||+|||.+|.+|+++ +... ..+...+.. +..+...+ ....+.....
T Consensus 147 ~---~~~g~~-------~~~~ad~vV~AdG~~S~vR~~l----~~~~---~~~~~~g~~~~~~~~~~~--~~~~~~~~~~ 207 (410)
T 3c96_A 147 R---DGHGKP-------QALGADVLVGADGIHSAVRAHL----HPDQ---RPLSHGGITMWRGVTEFD--RFLDGKTMIV 207 (410)
T ss_dssp E---ETTSCE-------EEEEESEEEECCCTTCHHHHHH----CTTC---CCCEEEEEEEEEEEEEES--CCTTSSEEEE
T ss_pred c---CCCCCc-------eEEecCEEEECCCccchhHHHh----cCCC---CCCCcCCeeEEEeecccc--cccCCCeEEE
Confidence 2 012321 5799999999999999999987 2221 111111111 11111221 1223444333
Q ss_pred eccCCCCCCcceEEEEEcCC-----CeEEEEEEecc--c------CCCCC---CCcHHHHHHhhcC-c---cccccccCC
Q 007716 332 LGWPLDQKTYGGSFLYHMND-----RQIALGLVVAL--N------YHNPF---LNPYEEFQKFKHH-P---AIKPLLEGG 391 (592)
Q Consensus 332 ~~~~~~~~~~g~~~~~~~~~-----~~~~vg~~~~~--~------~~~~~---~~~~~~~~~~~~~-p---~i~~~l~~~ 391 (592)
++.. . .+..++||..+ +...+.++... + ....+ ....+..+.+... + .+..+++..
T Consensus 208 ~~~~--~--~~~~~~~p~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~ 283 (410)
T 3c96_A 208 ANDE--H--WSRLVAYPISARHAAEGKSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWFDIRDLLTRN 283 (410)
T ss_dssp EECT--T--CCEEEEEECCHHHHTTTCEEEEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCCBTTBCHHHHHHTC
T ss_pred ecCC--C--CcEEEEEecCCcccCCCCcEEEEEEEecCcccccCCCccccCCCCCHHHHHHHhcCCCCchhHHHHHHhcC
Confidence 4321 1 13467888752 33334333221 1 00111 1222222333321 1 233344333
Q ss_pred cee-eecceeeecCCccccCcccCCCEEEEcCCCcccCCCCccchHHHHHHHHHHHHHHhhhccCCchHHHHHHHHHHhH
Q 007716 392 TVV-QYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKSW 470 (592)
Q Consensus 392 ~~~-~~~~~~i~~gg~~~~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~~~~l~~Y~~~~~~~~ 470 (592)
..+ .+ +.....++++|..+|++|||||||.++|+.|||+|+||+||..||++|........+|..|++.|+..
T Consensus 284 ~~~~~~-----~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~~~~~~~L~~Ye~~r~~~- 357 (410)
T 3c96_A 284 QLILQY-----PMVDRDPLPHWGRGRITLLGDAAHLMYPMGANGASQAILDGIELAAALARNADVAAALREYEEARRPT- 357 (410)
T ss_dssp SEEEEE-----EEEECCCCSCCCBTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHH-
T ss_pred ccccee-----ecccCCCccccccCCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH-
Confidence 221 11 11112245788889999999999999999999999999999999999987422246799999999864
Q ss_pred HHHHHHHHH
Q 007716 471 VWQELQRAR 479 (592)
Q Consensus 471 ~~~~l~~~r 479 (592)
+...+..++
T Consensus 358 ~~~~~~~s~ 366 (410)
T 3c96_A 358 ANKIILANR 366 (410)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhH
Confidence 555555544
No 18
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.96 E-value=7.5e-28 Score=255.64 Aligned_cols=335 Identities=13% Similarity=0.108 Sum_probs=179.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCccc-ccCccChHHHH---Hhh--HhhhhcCCCeee--
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII-SGNVFEPRALN---ELL--PQWKQEEAPIRV-- 179 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~-~g~~i~~~~l~---~ll--~~~~~~~~~~~~-- 179 (592)
.+|+||||||+||++|+.|++. |++|+||||.+.+..... .+-.+.+.++. ++. ..+.........
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~------G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~ 75 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH------GIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIG 75 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccC
Confidence 4699999999999999999999 999999999876543211 12235665542 221 111111000000
Q ss_pred ---eccCCcEEEeecCCcc-cCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCc
Q 007716 180 ---PVSSDKFWFLTKDRAF-SLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMG 255 (592)
Q Consensus 180 ---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g 255 (592)
................ ...........+.++|..|.+.|.+.+ +.+|++++++++++.++++.| .|++.|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~---~~~v~~~~~v~~~~~~~~~~v-~v~~~d-- 149 (412)
T 4hb9_A 76 GQSRFYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGL---ANTIQWNKTFVRYEHIENGGI-KIFFAD-- 149 (412)
T ss_dssp CCCEEECTTSCEEEC--------------CEEEEEHHHHHHHHHTTC---TTTEECSCCEEEEEECTTSCE-EEEETT--
T ss_pred cceeEecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhc---cceEEEEEEEEeeeEcCCCeE-EEEECC--
Confidence 0000011111110000 011111122356789999999987753 557999999999988776655 577665
Q ss_pred ccCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceee-EEEEEeecC-------CCCCCCc
Q 007716 256 IAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALG-IKEVWEIDE-------GKHNPGE 327 (592)
Q Consensus 256 ~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~~~~~~~~~~~~~g-~~~~~~i~~-------~~~~~g~ 327 (592)
|.+++||+||+|||.+|.+|+++. ... .+..++.. +.....+.. .....+.
T Consensus 150 -------------G~~~~adlvVgADG~~S~vR~~l~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (412)
T 4hb9_A 150 -------------GSHENVDVLVGADGSNSKVRKQYL----PFI----ERFDVGVSMIIGRARLTPALTALLPQNFRDGT 208 (412)
T ss_dssp -------------SCEEEESEEEECCCTTCHHHHHHS----TTC----CCEEEEEEEEEEEEECCHHHHHHSCGGGTSSC
T ss_pred -------------CCEEEeeEEEECCCCCcchHHHhC----CCc----cccccceeEEEEEEecchhhhcchhhhhccCC
Confidence 788999999999999999999872 221 11111111 111111110 0111111
Q ss_pred EEEEeccCCCCCC-cceEEEEEc--------CC--CeEEEEEEecc-cCCCC--CCCcHHHHH----Hhhc-Cccccccc
Q 007716 328 ILHTLGWPLDQKT-YGGSFLYHM--------ND--RQIALGLVVAL-NYHNP--FLNPYEEFQ----KFKH-HPAIKPLL 388 (592)
Q Consensus 328 ~~~~~~~~~~~~~-~g~~~~~~~--------~~--~~~~vg~~~~~-~~~~~--~~~~~~~~~----~~~~-~p~i~~~l 388 (592)
.... .|..++. +-..|..+. .+ +.+........ ..... ........+ .+.. +|.+..++
T Consensus 209 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~li 286 (412)
T 4hb9_A 209 PNSI--VPKSPDWLFISMWRAPVNIHVEASLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMISWDPSLHTLV 286 (412)
T ss_dssp CEEE--CCSSSEEEEEEEEEEESCTTSCGGGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred cceE--eecCCCcceeeeeecCCceeEEEeccCCCceEEEEEecccccccccccccchHHHHHHHHHHhccCChHHHHHH
Confidence 1111 1111100 000011111 01 11111111111 11111 112211111 1221 45566655
Q ss_pred cCCceeeecceeeecCCccccCcccCCCEEEEcCCCcccCCCCccchHHHHHHHHHHHHHHhhhccC----CchHHHHHH
Q 007716 389 EGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE----DSNMEIYWD 464 (592)
Q Consensus 389 ~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~----~~~l~~Y~~ 464 (592)
+....... ..+.......+++|..+|++|||||||.++|+.|||+|+||+||..||++|...... ..+|+.||+
T Consensus 287 ~~~~~~~~--~~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~~~~~aL~~Ye~ 364 (412)
T 4hb9_A 287 QQSDMENI--SPLHLRSMPHLLPWKSSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGHEELVKAISDYEQ 364 (412)
T ss_dssp HTSCTTCC--EEEEEEECCCCCCCCCCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred Hhccccee--ccchhccccccccccccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHH
Confidence 43322111 111111123456788999999999999999999999999999999999999987654 356999999
Q ss_pred HHHHhHHHHHHHHHHc
Q 007716 465 TLQKSWVWQELQRARN 480 (592)
Q Consensus 465 ~~~~~~~~~~l~~~r~ 480 (592)
.|+.. ..+.+..++.
T Consensus 365 ~R~~~-~~~~~~~s~~ 379 (412)
T 4hb9_A 365 QMRAY-ANEIVGISLR 379 (412)
T ss_dssp HHHHH-HHHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHH
Confidence 99865 6666665544
No 19
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.95 E-value=1.6e-27 Score=264.45 Aligned_cols=324 Identities=18% Similarity=0.206 Sum_probs=201.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhh------hcCCCeee
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWK------QEEAPIRV 179 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~------~~~~~~~~ 179 (592)
+++||||||||++|+++|+.|++. |++|+|||+....+. ..|..+.+..+. ++..+. ........
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~------G~~V~LiEr~~~~~~--~~G~~l~p~~~~-~l~~lGl~~~l~~~~~~~~~ 92 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKL------GHDVTIYERSAFPRY--RVGESLLPGTMS-ILNRLGLQEKIDAQNYVKKP 92 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCSSCC--CCCCBCCHHHHH-HHHHTTCHHHHHHHCCEEEC
T ss_pred CCCCEEEECcCHHHHHHHHHHHcC------CCCEEEEcCCCCCCC--ceeeeECHHHHH-HHHHcCCcHHHHhcCCcccC
Confidence 469999999999999999999999 999999999865443 236666666542 222221 11111000
Q ss_pred eccCCcEEEeecCC--cccCCC----CCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEecc
Q 007716 180 PVSSDKFWFLTKDR--AFSLPS----PFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTND 253 (592)
Q Consensus 180 ~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d 253 (592)
...+.+..... .+.+.. +......+.+++..+.+.|.+.+++.||+++++++|+++..++ +.+++|++.+
T Consensus 93 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~-g~~~~V~~~~ 168 (591)
T 3i3l_A 93 ---SATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSD-PDRVVLTVRR 168 (591)
T ss_dssp ---EEEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCS-TTCEEEEEEE
T ss_pred ---CcEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCEEEEEEec
Confidence 00000000000 011110 1122346889999999999999999999999999999998764 4456787763
Q ss_pred CcccCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeeEEEEEeecC--CCCCCCcEEEE
Q 007716 254 MGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDE--GKHNPGEILHT 331 (592)
Q Consensus 254 ~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~~~~~~~~~~~~~g~~~~~~i~~--~~~~~g~~~~~ 331 (592)
+|+ ..+++||+||+|+|.+|.+++++ ++.. ........++...+.... .....+.....
T Consensus 169 -----~G~-------~~~i~AdlVV~AdG~~S~lr~~l----g~~~---~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~ 229 (591)
T 3i3l_A 169 -----GGE-------SVTVESDFVIDAGGSGGPISRKL----GVRQ---YDEFYRNFAVWSYFKLKDPFEGDLKGTTYSI 229 (591)
T ss_dssp -----TTE-------EEEEEESEEEECCGGGCHHHHHH----TCEE---EEEEEEEEEEEEEEECCCSCCSTTTTCEEEE
T ss_pred -----CCc-------eEEEEcCEEEECCCCcchhHHHc----CCCC---CCccccceEEEEEEecCccccCCCCCceEEE
Confidence 121 16899999999999999988865 5542 111111223322222211 11122333322
Q ss_pred eccCCCCCCcceEEEEEcCCCeEEEEEEecccCCCC--CCCcHHHHHHhh-cCccccccccCCceeeecceeeecCCccc
Q 007716 332 LGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNP--FLNPYEEFQKFK-HHPAIKPLLEGGTVVQYGARTLNEGGLQS 408 (592)
Q Consensus 332 ~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~~~~~~--~~~~~~~~~~~~-~~p~i~~~l~~~~~~~~~~~~i~~gg~~~ 408 (592)
+. + .|..|++|..++.+++++....+.... ...+.+.++.+. ..|.+.+.+.....+.. .+.++.... .
T Consensus 230 ~~----~--~G~~w~iPl~~~~~sv~~~~~~~~~~~l~~~~~~~~~~~l~~~~p~l~~~l~~~~~~~~-~~~~~~~~~-~ 301 (591)
T 3i3l_A 230 TF----E--DGWVWMIPIKDDLYSVGLVVDRSKSAEVREQGADAFYSSTLAKCAKAMDILGGAEQVDE-VRIVQDWSY-D 301 (591)
T ss_dssp EE----T--TEEEEEEECSSSEEEEEEEEEGGGHHHHHHHCHHHHHHHHHTTCHHHHHHHTTCEECSC-CEEEEEEEE-E
T ss_pred Ec----C--CcEEEEEECCCCeEEEEEEcCHHHHhhhccCCHHHHHHHHHHhCHHHHHHHhcCccccC-ceEeccccc-c
Confidence 21 1 255789999998999988875432110 012223333332 34555555554443321 111111111 2
Q ss_pred cCcccCCCEEEEcCCCcccCCCCccchHHHHHHHHHHHHHHhhhccCC----chHHHHHHHHHHh
Q 007716 409 IPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHED----SNMEIYWDTLQKS 469 (592)
Q Consensus 409 ~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~~----~~l~~Y~~~~~~~ 469 (592)
.+++..+|+++||||||+++|+.|+|+++|++||..||++|...+... ..+..|++.++..
T Consensus 302 ~~~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~~~l~~~~~~~~al~~Y~~~~~~~ 366 (591)
T 3i3l_A 302 TEVFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRITRHGDEKDAVHAWYNRTYREA 366 (591)
T ss_dssp ESCSEETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHH
T ss_pred hhhcccCCEEEEccccccCCCcccccHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 357778999999999999999999999999999999999999876442 3678899888764
No 20
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.95 E-value=1.3e-26 Score=246.14 Aligned_cols=326 Identities=13% Similarity=0.100 Sum_probs=187.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
+.+||+||||||+||++|+.|++. |++|+|+||.+........|..+.+..+ +++..+.... .........
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~------G~~v~v~E~~~~~~~~~~~g~~l~~~~~-~~l~~~g~~~--~~~~~~~~~ 74 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDA------GVDVDVYERSPQPLSGFGTGIVVQPELV-HYLLEQGVEL--DSISVPSSS 74 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCCCCSCEEECCHHHH-HHHHHTTCCG--GGTCBCCCE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC------CCCEEEEecCCCCCCccccccccChhHH-HHHHHcCCcc--ccccccccc
Confidence 358999999999999999999999 9999999998764222223445677665 4444443211 011111222
Q ss_pred EEEeec-CCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccc
Q 007716 186 FWFLTK-DRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (592)
Q Consensus 186 ~~~~~~-~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~ 264 (592)
+.+... ......... .....+++..+.+.|.+.+ .|++|+++++|+++..++++ + .|++.+
T Consensus 75 ~~~~~~~~g~~~~~~~---~~~~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~-v-~v~~~~----------- 136 (397)
T 2vou_A 75 MEYVDALTGERVGSVP---ADWRFTSYDSIYGGLYELF--GPERYHTSKCLVGLSQDSET-V-QMRFSD----------- 136 (397)
T ss_dssp EEEEETTTCCEEEEEE---CCCCEEEHHHHHHHHHHHH--CSTTEETTCCEEEEEECSSC-E-EEEETT-----------
T ss_pred eEEEecCCCCcccccc---CcccccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecCCE-E-EEEECC-----------
Confidence 223322 111100000 0123477889999998876 58999999999999987754 4 466654
Q ss_pred ccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccce-eeEEEEEeecCCCCCCC------cEEEEeccCCC
Q 007716 265 NFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYA-LGIKEVWEIDEGKHNPG------EILHTLGWPLD 337 (592)
Q Consensus 265 ~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~~~~~~~~~~~~-~g~~~~~~i~~~~~~~g------~~~~~~~~~~~ 337 (592)
|.+++||+||+|||.+|.+|+++. .+ . +...+ ..+..+ ++.....+. ...+.+..
T Consensus 137 ----g~~~~ad~vV~AdG~~S~vr~~~~-~~--~------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--- 198 (397)
T 2vou_A 137 ----GTKAEANWVIGADGGASVVRKRLL-GI--E------PTYAGYVTWRGV--LQPGEVADDVWNYFNDKFTYGLL--- 198 (397)
T ss_dssp ----SCEEEESEEEECCCTTCHHHHHHH-CC--C------CEEEEEEEEEEE--ECTTSSCHHHHHHHTTEEEEEEE---
T ss_pred ----CCEEECCEEEECCCcchhHHHHhc-cC--C------CCccceEEEEEE--eeccccChhhhhhhcCceeEEec---
Confidence 568999999999999999999874 22 1 11111 111111 121111100 01111111
Q ss_pred CCCcceEEEEEcCC--C----eEEEEEEecccC--------CCC----C-------CCcHHHHH----Hhh-c-Cccccc
Q 007716 338 QKTYGGSFLYHMND--R----QIALGLVVALNY--------HNP----F-------LNPYEEFQ----KFK-H-HPAIKP 386 (592)
Q Consensus 338 ~~~~g~~~~~~~~~--~----~~~vg~~~~~~~--------~~~----~-------~~~~~~~~----~~~-~-~p~i~~ 386 (592)
++ +...+||..+ + .+.+.+...... .+. + ....+.++ .+. . .| +.+
T Consensus 199 ~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 275 (397)
T 2vou_A 199 DD--GHLIAYPIPGRENAESPRLNFQWYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKP-FRD 275 (397)
T ss_dssp TT--EEEEEEEECCSSTTSCCEEEEEEEEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCHH-HHH
T ss_pred CC--CEEEEEECCCCCCccceeEEEEEEecCCCccchhhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhChH-HHH
Confidence 11 1233455443 2 333333322110 000 0 00111222 221 1 12 444
Q ss_pred cccCCc-eeeecceeeecCCccccCcccCCCEEEEcCCCcccCCCCccchHHHHHHHHHHHHHHhhhccCCchHHHHHHH
Q 007716 387 LLEGGT-VVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDT 465 (592)
Q Consensus 387 ~l~~~~-~~~~~~~~i~~gg~~~~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~~~~l~~Y~~~ 465 (592)
+++... ... .+.... ..++|..+|++|||||||.++|+.|||+|+||+||..||++|........+|+.|++.
T Consensus 276 ~~~~~~~~~~-----~~~~~~-~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~~L~~Ye~~ 349 (397)
T 2vou_A 276 LVLNASSPFV-----TVVADA-TVDRMVHGRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTKNHDLRGSLQSWETR 349 (397)
T ss_dssp HHHHCSSCEE-----EEEEEB-CCSCSEETTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred HHhccCCcce-----eeeeee-cCCceecCcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 333211 111 111111 3468889999999999999999999999999999999999997532224679999999
Q ss_pred HHHhHHHHHHHHHHcchhhhh
Q 007716 466 LQKSWVWQELQRARNYRPAFE 486 (592)
Q Consensus 466 ~~~~~~~~~l~~~r~~~~~~~ 486 (592)
|+.. ....+..++.....++
T Consensus 350 R~~~-~~~~~~~s~~~~~~~~ 369 (397)
T 2vou_A 350 QLQQ-GHAYLNKVKKMASRLQ 369 (397)
T ss_dssp HHHH-HHHHHHHHHHHHHHHT
T ss_pred HHHH-HHHHHHHHHHHHHHHh
Confidence 8864 6666666666554444
No 21
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.94 E-value=2.8e-26 Score=243.53 Aligned_cols=318 Identities=16% Similarity=0.131 Sum_probs=183.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCcc--Ch----HHHHHh--hHhhhhcCCCe
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVF--EP----RALNEL--LPQWKQEEAPI 177 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i--~~----~~l~~l--l~~~~~~~~~~ 177 (592)
+++||+||||||+||++|+.|++. |++|+||||.+.++... .|+.+ .+ +.+.++ .+.+.....+.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~------G~~v~v~E~~~~~~~~~-~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~ 97 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQN------GIDVSVYERDNDREARI-FGGTLDLHKGSGQEAMKKAGLLQTYYDLALPM 97 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT------TCEEEEEECSSSTTCCC-CSCCEECCTTTHHHHHHHTTCHHHHHHHCBCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC------CCCEEEEeCCCCccccc-cCCeeeeCCccHHHHHHhcChHHHHHHhhccc
Confidence 468999999999999999999999 99999999987654322 23332 22 122221 22222211111
Q ss_pred eeeccCCcEEEeecCCcc--cC--CCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEecc
Q 007716 178 RVPVSSDKFWFLTKDRAF--SL--PSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTND 253 (592)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d 253 (592)
.. .+....... .. +.. .......+++..|.+.|.+.+++ ++|+++++|+++..++++ + .|++.+
T Consensus 98 ~~-------~~~~~~g~~~~~~~~~~~-~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~-v-~v~~~~ 165 (398)
T 2xdo_A 98 GV-------NIADEKGNILSTKNVKPE-NRFDNPEINRNDLRAILLNSLEN--DTVIWDRKLVMLEPGKKK-W-TLTFEN 165 (398)
T ss_dssp CE-------EEECSSSEEEEECCCGGG-TTSSCCEECHHHHHHHHHHTSCT--TSEEESCCEEEEEECSSS-E-EEEETT
T ss_pred ce-------EEECCCCCchhhcccccc-CCCCCceECHHHHHHHHHhhcCC--CEEEECCEEEEEEECCCE-E-EEEECC
Confidence 10 111111111 11 110 11224468999999999987753 789999999999987743 4 466654
Q ss_pred CcccCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceee-EEEEEeecCCC---------C
Q 007716 254 MGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALG-IKEVWEIDEGK---------H 323 (592)
Q Consensus 254 ~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~~~~~~~~~~~~~g-~~~~~~i~~~~---------~ 323 (592)
|.+++||+||+|||.+|.+|+++ +.. .+...+.. +... ++... .
T Consensus 166 ---------------g~~~~ad~vV~AdG~~S~vR~~l----~~~-----~~~~~g~~~~~~~--~~~~~~~~~~~~~~~ 219 (398)
T 2xdo_A 166 ---------------KPSETADLVILANGGMSKVRKFV----TDT-----EVEETGTFNIQAD--IHQPEINCPGFFQLC 219 (398)
T ss_dssp ---------------SCCEEESEEEECSCTTCSCCTTT----CCC-----CCEEEEEEEEEEE--ESSHHHHSHHHHHHH
T ss_pred ---------------CcEEecCEEEECCCcchhHHhhc----cCC-----CceEcceEEEEEE--eCchhccCchhHhhc
Confidence 56799999999999999999865 221 12222221 1111 11100 0
Q ss_pred CCCcEEEEeccCCCCCCcceEEEEEcCCCeEEEEEEeccc--CCC----CCCCcHHHHHH----hhc-CccccccccCCc
Q 007716 324 NPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALN--YHN----PFLNPYEEFQK----FKH-HPAIKPLLEGGT 392 (592)
Q Consensus 324 ~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~~--~~~----~~~~~~~~~~~----~~~-~p~i~~~l~~~~ 392 (592)
..+ ..+.++ ++ ...+.+|..++.+.+.+..... +.. +..++.+..+. |.. +|.+.+.++...
T Consensus 220 ~~g-~~~~~~----~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 292 (398)
T 2xdo_A 220 NGN-RLMASH----QG--NLLFANPNNNGALHFGISFKTPDEWKNQTQVDFQNRNSVVDFLLKEFSDWDERYKELIHTTL 292 (398)
T ss_dssp TTS-EEEEEE----TT--EEEEEEEEETTEEEEEEEEECCTTC---CCSCTTCHHHHHHHHHHHTTTSCHHHHHHHHHCS
T ss_pred CCc-eEEEec----CC--CeEEEEeCCCCcEEEEEEEecCcccccccccCcCCHHHHHHHHHHHHcCCChHHHHHHhCcc
Confidence 112 222221 11 2345567777777776654322 111 11222222222 221 234444443211
Q ss_pred -eeeecceeeecCCccccCcccC-C--CEEEEcCCCcccCCCCccchHHHHHHHHHHHHHHhhhccC--CchHHHHHHHH
Q 007716 393 -VVQYGARTLNEGGLQSIPYPVF-P--GGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE--DSNMEIYWDTL 466 (592)
Q Consensus 393 -~~~~~~~~i~~gg~~~~p~~~~-~--~v~LiGDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~--~~~l~~Y~~~~ 466 (592)
...+.... +...++|.. + |++|||||||.++|+.|||+|+||+||..||++|.....+ ..+|+.|+++|
T Consensus 293 ~~~~~~~~~-----~~~~~~~~~~~~~rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~~~~~~~~~L~~Y~~~r 367 (398)
T 2xdo_A 293 SFVGLATRI-----FPLEKPWKSKRPLPITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLADGKFNSIEEAVKNYEQQM 367 (398)
T ss_dssp CCEEEEEEE-----CCCCSCCCSCCSSCEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHH
T ss_pred cceeeeeEe-----ccCCCCcccCCCccEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Confidence 11111111 111235654 5 8999999999999999999999999999999999875222 35799999999
Q ss_pred HHhHHHHHHHHHHcc
Q 007716 467 QKSWVWQELQRARNY 481 (592)
Q Consensus 467 ~~~~~~~~l~~~r~~ 481 (592)
+.. ....+..++..
T Consensus 368 ~~~-~~~~~~~s~~~ 381 (398)
T 2xdo_A 368 FIY-GKEAQEESTQN 381 (398)
T ss_dssp HHH-HHHHHHHHHHH
T ss_pred HHH-HHHHHHHHHHH
Confidence 864 55555555443
No 22
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.94 E-value=1.3e-24 Score=240.22 Aligned_cols=332 Identities=15% Similarity=0.140 Sum_probs=189.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhh------hhcCCCeee
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQW------KQEEAPIRV 179 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~------~~~~~~~~~ 179 (592)
+++||+||||||+||++|+.|++. |++|+||||.+.++. ...+..+.++++ +++..+ .....+...
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~------G~~V~vlEr~~~~~~-~~~~~~l~~~~~-~~l~~lGl~~~~~~~~~~~~~ 96 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHR------QVGHLVVEQTDGTIT-HPRVGTIGPRSM-ELFRRWGVAKQIRTAGWPGDH 96 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSCSCCS-SCCCCEECHHHH-HHHHHTTCHHHHHTSSCCTTS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEeCCCCCCC-CCceeeeCHHHH-HHHHHcCChHHHHhhcCCccc
Confidence 468999999999999999999999 999999999987653 345677788776 333322 111111100
Q ss_pred eccCCcEEEeec-CCc---ccCCCC-------CCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEE
Q 007716 180 PVSSDKFWFLTK-DRA---FSLPSP-------FSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIG 248 (592)
Q Consensus 180 ~~~~~~~~~~~~-~~~---~~~~~~-------~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~ 248 (592)
. ....++... +.. +.++.. ......+.+++..+.+.|.+.+++. |+++++|++++.++++ | .
T Consensus 97 ~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~-v-~ 169 (549)
T 2r0c_A 97 P--LDAAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDH-V-R 169 (549)
T ss_dssp B--CCEEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSC-E-E
T ss_pred c--cceEEeccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCE-E-E
Confidence 0 001111100 000 111100 1112357899999999999999876 9999999999988755 4 3
Q ss_pred EEeccCcccCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeeEEEEEeecCC----CCC
Q 007716 249 IGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEG----KHN 324 (592)
Q Consensus 249 V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~~~~~~~~~~~~~g~~~~~~i~~~----~~~ 324 (592)
|++.+ ..+|+ ..+++||+||+|||.+|.+|+++ ++.. ........ .+...+..+.. ...
T Consensus 170 v~~~~---~~~G~-------~~~i~a~~vVgADG~~S~vR~~l----g~~~-~g~~~~~~--~~~~~~~~~~~~~~~~~~ 232 (549)
T 2r0c_A 170 ATITD---LRTGA-------TRAVHARYLVACDGASSPTRKAL----GIDA-PPRHRTQV--FRNILFRAPELRSLLGER 232 (549)
T ss_dssp EEEEE---TTTCC-------EEEEEEEEEEECCCTTCHHHHHH----TCCC-CBSSCCEE--EEEEEEECTTHHHHHGGG
T ss_pred EEEEE---CCCCC-------EEEEEeCEEEECCCCCcHHHHHc----CCCC-CCCcccce--EEEEEEECCchHHhcCCC
Confidence 55443 11232 15799999999999999999977 5543 11111111 12222232210 001
Q ss_pred CCcEEEEeccCCCCCCcceEEEEEcCCC-eEEEEEEecccCCCCCCCcHHHHHHhhcCccccccccCCceeeecceeeec
Q 007716 325 PGEILHTLGWPLDQKTYGGSFLYHMNDR-QIALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNE 403 (592)
Q Consensus 325 ~g~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~vg~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~l~~~~~~~~~~~~i~~ 403 (592)
+. ..+++..| .+ +..+++|.+++ .+.+.+ ..+.. . .++.+..+.++.. +...+. .+.+.... ...
T Consensus 233 ~~-~~~~~~~p--~~--~~~~~~p~~~~~~~~~~~--~~~~~-~-~~~~~~~~~l~~~--~~~~~~-~~~~~~~~--~~~ 298 (549)
T 2r0c_A 233 AA-LFFFLMLS--SS--LRFPLRALDGRGLYRLTV--GVDDA-S-KSTMDSFELVRRA--VAFDTE-IEVLSDSE--WHL 298 (549)
T ss_dssp CC-SEEEEEEE--TT--EEEEEEESSSSSEEEEEE--ECSTT-C-CSCCCHHHHHHHH--BCSCCC-CEEEEEEE--EEE
T ss_pred Cc-eEEEEECC--CC--cEEEEEEECCCcEEEEEe--cCCCC-C-CCHHHHHHHHHHH--hCCCCc-eeEEEEec--chh
Confidence 22 22222111 10 23577887553 344333 21111 1 2221111122110 000010 11111111 111
Q ss_pred CCccccCcccCCCEEEEcCCCcccCCCCccchHHHHHHHHHHHHHHhhhccC---CchHHHHHHHHHHhHHHHHHHHHHc
Q 007716 404 GGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKSWVWQELQRARN 480 (592)
Q Consensus 404 gg~~~~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~---~~~l~~Y~~~~~~~~~~~~l~~~r~ 480 (592)
.....++|..+|++|+|||||.++|+.|||+|+||+||..||+.|...++. ...|+.|+++|+.. ....+..++.
T Consensus 299 -~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~a~~~lL~~Y~~eR~~~-a~~~~~~s~~ 376 (549)
T 2r0c_A 299 -THRVADSFSAGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATLRGWAGPGLLATYEEERRPV-AITSLEEANV 376 (549)
T ss_dssp -CCEECSCSEETTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHHHTCSCTTTTHHHHHHHHHH-HHHHHHC---
T ss_pred -HhhhHHhhcCCcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 112456788899999999999999999999999999999999999887643 46899999999864 6666666665
Q ss_pred chhhh
Q 007716 481 YRPAF 485 (592)
Q Consensus 481 ~~~~~ 485 (592)
....+
T Consensus 377 ~~~~~ 381 (549)
T 2r0c_A 377 NLRRT 381 (549)
T ss_dssp -----
T ss_pred HHHhh
Confidence 55444
No 23
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.93 E-value=2.7e-25 Score=234.59 Aligned_cols=318 Identities=16% Similarity=0.040 Sum_probs=180.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhH-hhhhcCCCe-eeeccCCc
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLP-QWKQEEAPI-RVPVSSDK 185 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~-~~~~~~~~~-~~~~~~~~ 185 (592)
.||+||||||+||++|+.|++. .||++|+|+||.+.+.. ...+..+.+.++..+.. .+. ...++ ......+.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~----~~G~~V~v~E~~~~~~~-~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 74 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQA----RPLWAIDIVEKNDEQEV-LGWGVVLPGRPGQHPANPLSY-LDAPERLNPQFLED 74 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CTTSEEEEECSSCTTCC-CCSEEEEESCTTTCTTCGGGG-SSCGGGGCCEEECC
T ss_pred CeEEEECCCHHHHHHHHHHHhc----CCCCCEEEEECCCCCCc-ceeEEEeCcHHHHhhcCcchh-hhhhHHHhhccccc
Confidence 3799999999999999999986 35899999999876521 11122222222221110 000 00000 00011112
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
+.+...+..+. .. .....+.+++..|.+.|.+.+++.|++|+++++|++++..
T Consensus 75 ~~~~~~g~~~~--~~-~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~------------------------ 127 (381)
T 3c4a_A 75 FKLVHHNEPSL--MS-TGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL------------------------ 127 (381)
T ss_dssp EEEEESSSEEE--CC-CCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC------------------------
T ss_pred eEEEeCCeeEE--ec-CCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc------------------------
Confidence 22222221111 10 1123467999999999999999999999999988655310
Q ss_pred cccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeeEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEE
Q 007716 266 FQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSF 345 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~~~~~~~~~~~~~g~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~g~~~ 345 (592)
.+++||+||+|||.+|. |+++...++... ... .+......+.... ..... .+... ..|..|
T Consensus 128 ----~~~~ad~vV~AdG~~S~-R~~l~~~~g~~~-----~~~--~~~~~~~~~~~~~--~~~~~-~~~~~----~~g~~~ 188 (381)
T 3c4a_A 128 ----PLADYDLVVLANGVNHK-TAHFTEALVPQV-----DYG--RNKYIWYGTSQLF--DQMNL-VFRTH----GKDIFI 188 (381)
T ss_dssp ----CGGGCSEEEECCGGGGG-TCCSSGGGCCCC-----EEE--EEEEEEEEESSCC--SSEEE-EEEEE----TTEEEE
T ss_pred ----ccccCCEEEECCCCCch-HHhhhhhcCCCc-----ccC--CccEEEEecCCCC--Cccee-eEeeC----CCcEEE
Confidence 12469999999999999 886644445442 110 1111111222111 11111 11111 123333
Q ss_pred --EEEcCCCeEEEEEEeccc-C---CCCCCCcHHH---HH-Hhhc-CccccccccCCceeeecceeeecCCccccCcccC
Q 007716 346 --LYHMNDRQIALGLVVALN-Y---HNPFLNPYEE---FQ-KFKH-HPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVF 414 (592)
Q Consensus 346 --~~~~~~~~~~vg~~~~~~-~---~~~~~~~~~~---~~-~~~~-~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~ 414 (592)
+||..++...+.+....+ + ..+..++.+. +. .|.. .+. .+++.... +.+ ... .....++|..
T Consensus 189 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~-~~~--~~~---~~~~~~~~~~ 261 (381)
T 3c4a_A 189 AHAYKYSDTMSTFIVECSEETYARARLGEMSEEASAEYVAKVFQAELGG-HGLVSQPG-LGW--RNF---MTLSHDRCHD 261 (381)
T ss_dssp EEEEECSSSCEEEEEEECHHHHHHTTSSSSCHHHHHHHHHHHTHHHHTT-CCCBCCTT-TCS--EEE---EECCCSCSEE
T ss_pred EEEEEecCCeEEEEEECCccccccCCcccCChHHHHHHHHHHhcccCCC-chhhcCCC-cce--eee---ccccCCCccc
Confidence 588877665544433211 0 1111222221 11 1221 122 12332111 111 111 1124568888
Q ss_pred CCEEEEcCCCcccCCCCccchHHHHHHHHHHHHHHhhhccCCchHHHHHHHHHHhHHHHHHHHHHcchhhh
Q 007716 415 PGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKSWVWQELQRARNYRPAF 485 (592)
Q Consensus 415 ~~v~LiGDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~~~~l~~Y~~~~~~~~~~~~l~~~r~~~~~~ 485 (592)
+|++|||||||.++|+.|||+|+||+||..||++|........+|+.|++.++.. ....+..++.+...+
T Consensus 262 grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~~~~~~~aL~~Y~~~r~~~-~~~~~~~s~~~~~~~ 331 (381)
T 3c4a_A 262 GKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTEDGVPAALKRFEERALPL-VQLFRGHADNSRVWF 331 (381)
T ss_dssp TTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhh
Confidence 9999999999999999999999999999999999987522246799999999875 777777777766555
No 24
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.92 E-value=1.1e-23 Score=230.96 Aligned_cols=221 Identities=15% Similarity=0.115 Sum_probs=141.3
Q ss_pred CcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCC
Q 007716 205 GNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (592)
Q Consensus 205 ~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~ 284 (592)
..+.+++..+.+.|.+.+++.||+++++ +|+++..++++.+++|++.+ |.+++||+||+|||.+
T Consensus 166 ~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~---------------g~~~~ad~vV~A~G~~ 229 (511)
T 2weu_A 166 YAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQ---------------HGEISGDLFVDCTGFR 229 (511)
T ss_dssp CEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESS---------------SCEEECSEEEECCGGG
T ss_pred eeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECC---------------CCEEEcCEEEECCCcc
Confidence 3678999999999999999999999999 99999987667777888765 5689999999999999
Q ss_pred CcchHHHHHHcCCCccc--ccCcccceeeEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEEEEEcCCCeEEEEEEecc
Q 007716 285 GSLSEKLIKNFKLREKS--HAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL 362 (592)
Q Consensus 285 s~vr~~l~~~~~l~~~~--~~~~~~~~~g~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~ 362 (592)
|.+++++ ++..... ...+...++.+. .................. + .|..|++|..+ ...+|++...
T Consensus 230 S~~~~~~---~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~----~--~g~~~~~P~~~-~~~~g~~~~~ 297 (511)
T 2weu_A 230 GLLINQT---LGGRFQSFSDVLPNNRAVALR--VPRENDEDMRPYTTATAM----S--AGWMWTIPLFK-RDGNGYVYSD 297 (511)
T ss_dssp CCCCCCC---TCCCEEECTTTCCCCEEEEEE--EECSSGGGCCSSEEEEEE----T--TEEEEEEECSS-EEEEEEEECT
T ss_pred hHHHHHH---hCCCCccccccCcccceEEEE--eccCCCCCCCcceeceec----C--CCcEEEEECCC-ceEEEEEECC
Confidence 9986543 3443200 011112222222 122111001122222111 1 24578899876 6777776542
Q ss_pred cCCCCCCCcHHHHHHhhc----CccccccccCCceeeecceeeecCCccccCcccCCCEEEEcCCCcccCCCCccchHHH
Q 007716 363 NYHNPFLNPYEEFQKFKH----HPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTA 438 (592)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~----~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~LiGDAA~~~~P~~g~G~~~A 438 (592)
+ ..++.+..+.+.. .|. +.....+.. ..+. .+++..+|++|||||||+++|+.|+|+++|
T Consensus 298 ~----~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~------~~~~--~~~~~~~rv~liGDAAh~~~P~~g~G~~~a 361 (511)
T 2weu_A 298 E----FISPEEAERELRSTVAPGRD----DLEANHIQM------RIGR--NERTWINNCVAVGLSAAFVEPLESTGIFFI 361 (511)
T ss_dssp T----TSCHHHHHHHHHHHHCTTCT----TSCCEEEEC------CCEE--ESCSEETTEEECGGGTEECCGGGCCHHHHH
T ss_pred C----CCCHHHHHHHHHHHhCcccc----cccceeEEe------eccc--cccccCCCEEEEechhhccCccccccHHHH
Confidence 2 2233332233321 121 111122211 1122 256667999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccCCchHHHHHHHHHHh
Q 007716 439 MKSGMLAAEAGFGVLHEDSNMEIYWDTLQKS 469 (592)
Q Consensus 439 m~dg~~aA~~l~~~~~~~~~l~~Y~~~~~~~ 469 (592)
++||..||++|...-....+++.|++.++..
T Consensus 362 ~~da~~La~~l~~~~~~~~~l~~Y~~~~~~~ 392 (511)
T 2weu_A 362 QHAIEQLVKHFPGERWDPVLISAYNERMAHM 392 (511)
T ss_dssp HHHHHHHHHTCCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCHHHHHHHHHHHHHH
Confidence 9999999999875221235789999988764
No 25
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.92 E-value=1.2e-23 Score=232.12 Aligned_cols=218 Identities=12% Similarity=0.078 Sum_probs=138.1
Q ss_pred CcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCC
Q 007716 205 GNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (592)
Q Consensus 205 ~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~ 284 (592)
..+.+++..+.+.|.+.+++.||+++.+ +|+++..++++.+++|++.+ |.+++||+||+|+|.+
T Consensus 158 ~~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~---------------g~~i~ad~vV~A~G~~ 221 (538)
T 2aqj_A 158 HAWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKE---------------GRTLEADLFIDCSGMR 221 (538)
T ss_dssp CEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETT---------------SCEECCSEEEECCGGG
T ss_pred ccEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECC---------------CcEEEeCEEEECCCCc
Confidence 3688999999999999999999999999 89999887767677788765 5689999999999999
Q ss_pred CcchHHHHHHcCCCccccc--CcccceeeEEEEEeecCCC----CCCCcEEEEeccCCCCCCcceEEEEEcCCCeEEEEE
Q 007716 285 GSLSEKLIKNFKLREKSHA--QHQTYALGIKEVWEIDEGK----HNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGL 358 (592)
Q Consensus 285 s~vr~~l~~~~~l~~~~~~--~~~~~~~g~~~~~~i~~~~----~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~ 358 (592)
|.+++++ ++....... .+...++.+ .++... ..+. ..... . ..|..|++|..+ ...+|+
T Consensus 222 s~~~~~~---lg~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~----~--~~g~~~~~p~~~-~~~~g~ 286 (538)
T 2aqj_A 222 GLLINQA---LKEPFIDMSDYLLCDSAVAS----AVPNDDARDGVEPY-TSSIA----M--NSGWTWKIPMLG-RFGSGY 286 (538)
T ss_dssp CCCCCCC---TCCCEEECTTTCCCCEEEEE----EEECCHHHHCCCSS-EEEEE----C--SSEEEEEEEETT-EEEEEE
T ss_pred hhhHHHH---hCCCccccccccccceEEEE----ecccCCcccCCCCc-eeeee----c--CCceEEEecCCC-ceEEEE
Confidence 9986543 344320000 011111111 111110 1111 11111 1 125578889876 466777
Q ss_pred EecccCCCCCCCcHHHHHHhhc---CccccccccCCceeeecceeeecCCccccCcccCCCEEEEcCCCcccCCCCccch
Q 007716 359 VVALNYHNPFLNPYEEFQKFKH---HPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGT 435 (592)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~---~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~LiGDAA~~~~P~~g~G~ 435 (592)
+...++ .++.+..+.+.. .+. + .....+.+ ..+ ..+++..+|++|||||||+++|+.|+|+
T Consensus 287 v~~~~~----~~~~~~~~~l~~~~~~~~---~-~~~~~~~~------~~~--~~~~~~~grvvliGDAAh~~~P~~gqG~ 350 (538)
T 2aqj_A 287 VFSSHF----TSRDQATADFLKLWGLSD---N-QPLNQIKF------RVG--RNKRAWVNNCVSIGLSSCFLEPLESTGI 350 (538)
T ss_dssp EECTTT----SCHHHHHHHHHHHHTCCT---T-CCCEEEEC------CCE--EESCSEETTEEECGGGTEECCGGGSCHH
T ss_pred EEcCCC----CChHHHHHHHHHHhcCCC---C-CCceEEee------ccc--cccccccCCEEEEcccccccCcchhccH
Confidence 654222 233222222221 111 1 11111211 011 2356778999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccCCchHHHHHHHHHHh
Q 007716 436 HTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKS 469 (592)
Q Consensus 436 ~~Am~dg~~aA~~l~~~~~~~~~l~~Y~~~~~~~ 469 (592)
++||+||..||++|...-....+|..|++.++..
T Consensus 351 ~~a~~da~~La~~L~~~~~~~~~l~~Y~~~~~~~ 384 (538)
T 2aqj_A 351 YFIYAALYQLVKHFPDTSFDPRLSDAFNAEIVHM 384 (538)
T ss_dssp HHHHHHHHHHHHTCCBTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHH
Confidence 9999999999988764221235789999988764
No 26
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.91 E-value=8.1e-24 Score=232.77 Aligned_cols=227 Identities=14% Similarity=0.086 Sum_probs=136.1
Q ss_pred cEEEcHHHHHHHHHHHHHH-cCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCC
Q 007716 206 NYVISLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (592)
Q Consensus 206 ~~~v~~~~l~~~L~~~a~~-~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~ 284 (592)
.+.+++..+.+.|.+.+++ .||+++++ +|+++..++++.+++|++.+ |.+++||+||+|||.+
T Consensus 169 ~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~---------------g~~i~ad~vV~AdG~~ 232 (526)
T 2pyx_A 169 GYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQ---------------NGEISGQLFIDCTGAK 232 (526)
T ss_dssp EEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESS---------------SCEEECSEEEECSGGG
T ss_pred eEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECC---------------CCEEEcCEEEECCCcc
Confidence 5789999999999999999 89999999 69999887667666787754 4579999999999999
Q ss_pred CcchHHHHHHcCCCccccc--CcccceeeEEEEEeecCC-CCCCCcEEEEeccCCCCCCcceEEEEEcCCCeEEEEEEec
Q 007716 285 GSLSEKLIKNFKLREKSHA--QHQTYALGIKEVWEIDEG-KHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVA 361 (592)
Q Consensus 285 s~vr~~l~~~~~l~~~~~~--~~~~~~~g~~~~~~i~~~-~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~ 361 (592)
|.++++. ++....... .+...++.+.. ..... ............ . .|..|++|..+ ...++++..
T Consensus 233 S~~~~~~---lg~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~----~--~g~~~~~pl~~-~~~~~~v~~ 300 (526)
T 2pyx_A 233 SLLLGEH---LQVPFLSQKSVLFNDRALAIQV--PYSDANSPIASCTHSTAQ----P--NGWIWDIGLPT-RKGVGYVYS 300 (526)
T ss_dssp CCCCCCC---TCCCEEECHHHHCCCEEEEEEE--ECSSTTCCCCSSEEEEEE----T--TEEEEEEECSS-EEEEEEEEC
T ss_pred hHHHHHH---hCCCcccccccccCccEEEEEe--eccCCCCCCCCceeEEec----C--CCeEEEeeCCC-ceEEEEEec
Confidence 9984322 344320000 01112222221 11110 111122222211 1 24578888876 455666543
Q ss_pred ccCCCCCCCcHHHHHHhhcCccccccccCCceeeecceeeecCCccccCcccCCCEEEEcCCCcccCCCCccchHHHHHH
Q 007716 362 LNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKS 441 (592)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Am~d 441 (592)
.++..+ ....+.+..+... ..+.++..+. +.++... ...+++..+|++|||||||+++|+.|+|+++||+|
T Consensus 301 ~~~~~~-~~~~~~l~~~l~~--~~~~l~~~~~-----~~~~~~~-~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~d 371 (526)
T 2pyx_A 301 SSHTND-IDAQKTLFNYLGV--DGAAADKLEP-----RQLAINP-GYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWT 371 (526)
T ss_dssp TTTCCH-HHHHHHHHHHHTC--CHHHHHHCCC-----EEEECCC-EEESCSEETTEEECGGGTEECCCTTCHHHHHHHHH
T ss_pred CCCCCh-HHHHHHHHHHHHh--cCcccccCCc-----eEEeccc-CccccccCCCEEEEEhhhcccCccccccHHHHHHH
Confidence 322110 0111222222111 0111211111 1111110 11356677999999999999999999999999999
Q ss_pred HHHHHHHHhhhcc-CCchHHHHHHHHHHh
Q 007716 442 GMLAAEAGFGVLH-EDSNMEIYWDTLQKS 469 (592)
Q Consensus 442 g~~aA~~l~~~~~-~~~~l~~Y~~~~~~~ 469 (592)
|..||++|..... ....++.|++.++..
T Consensus 372 a~~La~~L~~~~~~~~~~l~~Y~~~~~~~ 400 (526)
T 2pyx_A 372 ASTLAQQLPPNRMVMDTISARVNERYQQH 400 (526)
T ss_dssp HHHHHHTCCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcCCcCHHHHHHHHHHHHHH
Confidence 9999998863211 135788999988765
No 27
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.91 E-value=6e-23 Score=226.94 Aligned_cols=225 Identities=12% Similarity=0.068 Sum_probs=137.9
Q ss_pred cEEEcHHHHHHHHHHHHHHc-CCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCC
Q 007716 206 NYVISLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (592)
Q Consensus 206 ~~~v~~~~l~~~L~~~a~~~-Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~ 284 (592)
.+.+++..+.+.|.+.+++. ||+++++ +|+++..++++.+++|++.+ |.+++||+||+|+|.+
T Consensus 188 ~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~---------------G~~i~ad~vI~A~G~~ 251 (550)
T 2e4g_A 188 AWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTAT---------------GRVFDADLFVDCSGFR 251 (550)
T ss_dssp EEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETT---------------SCEEECSEEEECCGGG
T ss_pred ceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECC---------------CCEEECCEEEECCCCc
Confidence 57899999999999999998 9999999 99999887667777888765 5689999999999999
Q ss_pred CcchHHHHHHcCCCccccc--CcccceeeEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEEEEEcCCCeEEEEEEecc
Q 007716 285 GSLSEKLIKNFKLREKSHA--QHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL 362 (592)
Q Consensus 285 s~vr~~l~~~~~l~~~~~~--~~~~~~~g~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~ 362 (592)
|.+++++ ++....... .+....+.+......+... .......... + .|..|++|..+ ...+|++...
T Consensus 252 S~~~~~~---lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~--~g~~~~ipl~~-~~~~g~v~~~ 320 (550)
T 2e4g_A 252 GLLINKA---MEEPFLDMSDHLLNDSAVATQVPHDDDANG-VEPFTSAIAM----K--SGWTWKIPMLG-RFGTGYVYSS 320 (550)
T ss_dssp CCCCCCC---TCCCEEECTTTCCCCEEEEEEEECCHHHHC-CCSSEEEEEC----S--SEEEEEEECSS-EEEEEEEECT
T ss_pred hhhHHHH---hCCCcccccccccccceEEEeecccCCccc-CCCceeeeec----C--CceEEEccCCC-ccceEEEEec
Confidence 9884432 243310000 0111122211111100000 1112222111 1 24568888866 5666766533
Q ss_pred cCCCCCCCcHHHHHHhhcCccccccccCCceeeecceeeecCCccccCcccCCCEEEEcCCCcccCCCCccchHHHHHHH
Q 007716 363 NYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSG 442 (592)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Am~dg 442 (592)
++ .++.+..+.+...-...+.+.....+.+ ..+ ..+++..+|+++||||||+++|+.|+|+++|++||
T Consensus 321 ~~----~~~~~~~~~l~~~~~~~p~l~~~~~i~~------~~~--~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da 388 (550)
T 2e4g_A 321 RF----ATEDEAVREFCEMWHLDPETQPLNRIRF------RVG--RNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAAL 388 (550)
T ss_dssp TT----SCHHHHHHHHHHHTTCCTTTSCCEEEEC------CCE--EESCSEETTEEECSTTTEECCGGGSCHHHHHHHHH
T ss_pred CC----CChHHHHHHHHHhhCcCcccCCCceEEe------cCC--CccccccCCEEEEehhhcccCccchhhHHHHHHHH
Confidence 22 2332222222210000011111122211 111 23456678999999999999999999999999999
Q ss_pred HHHHHHHhhhccCCchHHHHHHHHHHh
Q 007716 443 MLAAEAGFGVLHEDSNMEIYWDTLQKS 469 (592)
Q Consensus 443 ~~aA~~l~~~~~~~~~l~~Y~~~~~~~ 469 (592)
..||++|.........++.|++.++..
T Consensus 389 ~~La~~L~~~~~~~~~l~~Y~~~~~~~ 415 (550)
T 2e4g_A 389 YQLVKHFPDKSLNPVLTARFNREIETM 415 (550)
T ss_dssp HHHHHTCCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHH
Confidence 999998864322235789999988864
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.86 E-value=8.7e-21 Score=203.33 Aligned_cols=310 Identities=14% Similarity=0.120 Sum_probs=166.2
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCC---CCcccccCccChHHHHHh----hHhhhhcCCCe
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEV---GAHIISGNVFEPRALNEL----LPQWKQEEAPI 177 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~---g~~~~~g~~i~~~~l~~l----l~~~~~~~~~~ 177 (592)
.|.+||+||||||+||++|+.|++. |++|+||||.... ++.+.++.++....+..+ +..|.....++
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~------G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~ 93 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQH------DVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSEEFGY 93 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHT------TCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHHHHCE
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHC------CCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhhcccc
Confidence 4678999999999999999999999 9999999998621 223334455555544211 12232211111
Q ss_pred eeeccCCcEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCccc
Q 007716 178 RVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIA 257 (592)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~ 257 (592)
. ...+.+... ..+.+.... ....+.+.+..+..+|.+.+++.|++++.+. + ...+ +.
T Consensus 94 ~----~~~~~~~~~-~~~~~~~~~-~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~-v---~~~~------l~------- 150 (430)
T 3ihm_A 94 F----GHYYYVGGP-QPMRFYGDL-KAPSRAVDYRLYQPMLMRALEARGGKFCYDA-V---SAED------LE------- 150 (430)
T ss_dssp E----EEEEEECSS-SCEEEEEEE-EEEEBEECHHHHHHHHHHHHHHTTCEEEECC-C---CGGG------HH-------
T ss_pred c----ceeEEECCC-Cccccchhc-CCcceeecHHHHHHHHHHHHHHcCCEEEEEe-c---chhh------hh-------
Confidence 0 001111110 011111000 1124678999999999999999999987632 1 0000 00
Q ss_pred CCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcc--cccCcccceeeEEEEEeecCCCCCCCcEEEEeccC
Q 007716 258 KDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREK--SHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWP 335 (592)
Q Consensus 258 ~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~~~--~~~~~~~~~~g~~~~~~i~~~~~~~g~~~~~~~~~ 335 (592)
.....+|+||+|||.+|.++. +..... ....++. .+.+..+..+.... ..+..+..+ +
T Consensus 151 -----------~~~~~ad~VV~AdG~~S~~~~-----~~~~~~~~~~~~p~r-~~~~~~~~g~~~~~-~~~~~~~~~--~ 210 (430)
T 3ihm_A 151 -----------GLSEQYDLLVVCTGKYALGKV-----FEKQSENSPFEKPQR-ALCVGLFKGIKEAP-IRAVTMSFS--P 210 (430)
T ss_dssp -----------HHHTTSSEEEECCCCTTGGGG-----SCBCGGGCCCSSCSS-EEEEEEEESBCCCS-SCCEEEEEE--T
T ss_pred -----------hhcccCCEEEECCCCcchHHh-----ccCCCCCCcccCCCe-eEEEEEEccCCCCC-cCeeeeeec--C
Confidence 011258999999999997652 332210 0011111 12211111222211 111112211 1
Q ss_pred CCCCCcceEEEEEc--CCCeEEEEEEeccc------CCCCC--CCcHHHH----HHhh-cCccccccccCCceeeec-ce
Q 007716 336 LDQKTYGGSFLYHM--NDRQIALGLVVALN------YHNPF--LNPYEEF----QKFK-HHPAIKPLLEGGTVVQYG-AR 399 (592)
Q Consensus 336 ~~~~~~g~~~~~~~--~~~~~~vg~~~~~~------~~~~~--~~~~~~~----~~~~-~~p~i~~~l~~~~~~~~~-~~ 399 (592)
..|..|++|. .++...+.++.... +.... .++.+.+ +.+. .+|.+.+.+......... ..
T Consensus 211 ----~~G~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 286 (430)
T 3ihm_A 211 ----GHGELIEIPTLSFNGMSTALVLENHIGSDLEVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAERIDPAEFDLANSSL 286 (430)
T ss_dssp ----TTEEEEEEEEEETTEEEEEEEEEECTTSSSGGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTTBCTTTCEESSSTT
T ss_pred ----CCcceEEecccCCCcceEEEEEEecCCCcHHHhccccCCCCHHHHHHHHHHHHHHhCccHHHHHhhchhccccCcc
Confidence 1255677774 33455554443321 11110 1222222 2222 256666666544311100 00
Q ss_pred eeecCC-----ccccCcccCCCEEE-EcCCCcccCCCCccchHHHHHHHHHHHHHHhhhccCCchHHHHHHHHH
Q 007716 400 TLNEGG-----LQSIPYPVFPGGAI-IGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQ 467 (592)
Q Consensus 400 ~i~~gg-----~~~~p~~~~~~v~L-iGDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~~~~l~~Y~~~~~ 467 (592)
.+..+. ..++++|..++++| +|||||.++|+.|||+|+||+||..||++|........+|..|+..++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~~~~~~~~~~~~~~r~ 360 (430)
T 3ihm_A 287 DILQGGVVPAFRDGHATLNNGKTIIGLGDIQATVDPVLGQGANMASYAAWILGEEILAHSVYDLRFSEHLERRR 360 (430)
T ss_dssp SEEEECCCCEEBCSEEECTTSCEEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHCSCCSHHHHHHHHHHH
T ss_pred ceeecceeecccccccccCCCCEEEEecCccccCCCchhhhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 000001 12446788889988 999999999999999999999999999999987544678999988776
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.73 E-value=1.2e-16 Score=174.19 Aligned_cols=143 Identities=23% Similarity=0.186 Sum_probs=98.0
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCC
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~ 184 (592)
...+||+|||||++||++|+.|++. |++|+||||.+.+|.. ....+.+..+..+ ..+.... .
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~------G~~V~liEk~~~~g~~--~~~~~~~~~~~~l-~~~g~~~-----~---- 151 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALL------GARVVLVEKRIKFSRH--NVLHLWPFTIHDL-RALGAKK-----F---- 151 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCSSCCCC--CEEECCHHHHHHH-HTTTHHH-----H----
T ss_pred cCCCCEEEECccHHHHHHHHHHHHC------CCeEEEEEeccccCCC--CcccCChhHHHHH-HHcCCcc-----c----
Confidence 3578999999999999999999999 9999999999877642 2222344444222 1111100 0
Q ss_pred cEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcC-CCcEEEEEeccCcccC-CCCc
Q 007716 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDA-DNKVIGIGTNDMGIAK-DGSK 262 (592)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~-~g~v~~V~~~d~g~~~-~G~~ 262 (592)
...+. ......+++..+.+.|.+.+++.||+|+++++|+++..++ ++..+.|++.+ . +|+.
T Consensus 152 -------~~~~~------~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~----~~~g~~ 214 (497)
T 2bry_A 152 -------YGRFC------TGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQP----NPPAQL 214 (497)
T ss_dssp -------CTTTT------CTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEES----CCCHHH
T ss_pred -------ccccc------ccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEE----CCCCCE
Confidence 00000 0112357788999999999999999999999999998752 23334566632 1 1211
Q ss_pred ccccccceEEEcCEEEEecCCCCcchH
Q 007716 263 KENFQRGVELRGRITLLAEGCRGSLSE 289 (592)
Q Consensus 263 ~~~f~~g~~i~a~~vI~A~G~~s~vr~ 289 (592)
.+++||+||+|||++|.+++
T Consensus 215 -------~~i~ad~VV~A~G~~S~~r~ 234 (497)
T 2bry_A 215 -------ASYEFDVLISAAGGKFVPEG 234 (497)
T ss_dssp -------HTCCBSEEEECCCTTCCCTT
T ss_pred -------EEEEcCEEEECCCCCccccc
Confidence 46899999999999999875
No 30
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.70 E-value=4.6e-16 Score=163.42 Aligned_cols=288 Identities=17% Similarity=0.156 Sum_probs=158.9
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCC-cccccCccChHH-------HH-------HhhHh
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGA-HIISGNVFEPRA-------LN-------ELLPQ 169 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~-~~~~g~~i~~~~-------l~-------~ll~~ 169 (592)
.+++||||||||++|+++|+.|++. |++|+|||+....++ ...+++.+.+.. +. ++++.
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~------G~~V~llE~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~ 88 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKE------NKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKG 88 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSTTTTHHHHCCCBCCGGGSCSSCSHHHHHHHHHHHHTTT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhC------CCcEEEEeCCCCCcccchhcCceeccCccCCCCcHHHHHHHHHHHHHHH
Confidence 4569999999999999999999998 999999999864433 223455544321 11 11111
Q ss_pred hhhc-----CCCeeeeccCC----------------------cEEEeecCCcc-cCCCC-------CCCCCcEEEcHHHH
Q 007716 170 WKQE-----EAPIRVPVSSD----------------------KFWFLTKDRAF-SLPSP-------FSNRGNYVISLSQL 214 (592)
Q Consensus 170 ~~~~-----~~~~~~~~~~~----------------------~~~~~~~~~~~-~~~~~-------~~~~~~~~v~~~~l 214 (592)
+... +... .+... .+.+++..... ..|.. ........++...+
T Consensus 89 ~~~~~~~~~~~~~--~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (382)
T 1ryi_A 89 LGEELYALSGVDI--RQHNGGMFKLAFSEEDVLQLRQMDDLDSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFV 166 (382)
T ss_dssp HHHHHHHHHCCCC--CCBCCCEEEEESSHHHHHHHHTTTTSTTEEEEEHHHHHHHCTTSCTTCCEEEEETTCCBCCHHHH
T ss_pred HHHHHHHhhCCCc--CeeecceEEEEeCHHHHHHHHHHhhcCCeEEECHHHHHHhCCCCCcccceEEEeCCCeEEcHHHH
Confidence 1100 1000 00000 11122111000 01100 00112345678899
Q ss_pred HHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHH
Q 007716 215 VRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKN 294 (592)
Q Consensus 215 ~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~ 294 (592)
.+.|.+.+++.|++|+++++|+++..++ +.+ +|++.+ | +++||.||+|+|.++. .+.+.
T Consensus 167 ~~~l~~~~~~~g~~i~~~~~v~~i~~~~-~~~-~v~~~~---------------g-~~~a~~vV~A~G~~s~---~l~~~ 225 (382)
T 1ryi_A 167 CKAYVKAAKMLGAEIFEHTPVLHVERDG-EAL-FIKTPS---------------G-DVWANHVVVASGVWSG---MFFKQ 225 (382)
T ss_dssp HHHHHHHHHHTTCEEETTCCCCEEECSS-SSE-EEEETT---------------E-EEEEEEEEECCGGGTH---HHHHH
T ss_pred HHHHHHHHHHCCCEEEcCCcEEEEEEEC-CEE-EEEcCC---------------c-eEEcCEEEECCChhHH---HHHHh
Confidence 9999999999999999999999998776 445 677764 4 7999999999999874 34444
Q ss_pred cCCCcccccCcccceeeEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEEEEEcCCCeEEEEEEecccCCCCCCCcHHH
Q 007716 295 FKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEE 374 (592)
Q Consensus 295 ~~l~~~~~~~~~~~~~g~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~ 374 (592)
++... +.....|.....+.+.. .....+. . .+.|++|..++.+.+|........+.... .+.
T Consensus 226 ~~~~~-----~~~~~~g~~~~~~~~~~--~~~~~~~--~--------~~~~~~p~~~g~~~vG~~~~~~~~~~~~~-~~~ 287 (382)
T 1ryi_A 226 LGLNN-----AFLPVKGECLSVWNDDI--PLTKTLY--H--------DHCYIVPRKSGRLVVGATMKPGDWSETPD-LGG 287 (382)
T ss_dssp TTCCC-----CCEEEEEEEEEEECCSS--CCCSEEE--E--------TTEEEEECTTSEEEEECCCEETCCCCSCC-HHH
T ss_pred cCCCC-----ceeccceEEEEECCCCC--CccceEE--c--------CCEEEEEcCCCeEEEeecccccCCCCCCC-HHH
Confidence 55432 11111122111222211 1111211 0 13688998788888886533221111122 222
Q ss_pred HHHh----h-cCccccccccCCceeeecceeeecCCccccCcccCCCEEEEcCCC-----cccCCCCccchHHHHHHHHH
Q 007716 375 FQKF----K-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAA-----GFLNVPKIKGTHTAMKSGML 444 (592)
Q Consensus 375 ~~~~----~-~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~LiGDAA-----~~~~P~~g~G~~~Am~dg~~ 444 (592)
.+.+ . ..|.+. ..+.+. .+.++. .+..++..++|++. ....++.|.|+.+|+..|.+
T Consensus 288 ~~~l~~~~~~~~p~l~----~~~~~~------~w~g~~---~~t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~ 354 (382)
T 1ryi_A 288 LESVMKKAKTMLPAIQ----NMKVDR------FWAGLR---PGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGAL 354 (382)
T ss_dssp HHHHHHHHHHHCGGGG----GSEEEE------EEEEEE---EECSSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHH
T ss_pred HHHHHHHHHHhCCCcC----CCceee------EEEEec---ccCCCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHH
Confidence 2222 1 123322 112221 111222 22345566778753 23467889999999999999
Q ss_pred HHHHHhhh
Q 007716 445 AAEAGFGV 452 (592)
Q Consensus 445 aA~~l~~~ 452 (592)
+|+.|...
T Consensus 355 la~~i~~~ 362 (382)
T 1ryi_A 355 ISDLIMNK 362 (382)
T ss_dssp HHHHHTTC
T ss_pred HHHHHhCC
Confidence 99998753
No 31
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.66 E-value=5.8e-15 Score=152.04 Aligned_cols=149 Identities=17% Similarity=0.235 Sum_probs=89.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCccccc-----------Ccc--ChHHHHHhhHhhhh
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISG-----------NVF--EPRALNELLPQWKQ 172 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g-----------~~i--~~~~l~~ll~~~~~ 172 (592)
|.+||+|||||++|+++|+.|++. |++|+||||.+.+|+..... ..+ ....+.+++..|..
T Consensus 1 m~~dV~IIGaG~~Gl~~A~~L~~~------G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (336)
T 1yvv_A 1 MTVPIAIIGTGIAGLSAAQALTAA------GHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQA 74 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHH
T ss_pred CCceEEEECCcHHHHHHHHHHHHC------CCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHh
Confidence 357999999999999999999999 99999999998777644221 011 12334456666654
Q ss_pred cCCCeeeeccCCcEEEeecCCcccCCCCCCCCCcEEE--cHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEE
Q 007716 173 EEAPIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVI--SLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIG 250 (592)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~ 250 (592)
..... ... ..+...... .+.. .......|.. ....+.+.|. .|++|+++++|+++..++++ + .|+
T Consensus 75 ~~~~~--~~~-~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~l~~~l~-----~g~~i~~~~~v~~i~~~~~~-~-~v~ 141 (336)
T 1yvv_A 75 QGHVA--EWT-PLLYNFHAG-RLSP--SPDEQVRWVGKPGMSAITRAMR-----GDMPVSFSCRITEVFRGEEH-W-NLL 141 (336)
T ss_dssp HTSEE--EEC-CCEEEESSS-BCCC--CCTTSCEEEESSCTHHHHHHHH-----TTCCEECSCCEEEEEECSSC-E-EEE
T ss_pred CCCee--ecc-ccceeccCc-cccc--CCCCCccEEcCccHHHHHHHHH-----ccCcEEecCEEEEEEEeCCE-E-EEE
Confidence 32111 111 111111111 1110 0011112222 1233333332 28999999999999988754 3 466
Q ss_pred eccCcccCCCCcccccccceEE-EcCEEEEecCCCCcch
Q 007716 251 TNDMGIAKDGSKKENFQRGVEL-RGRITLLAEGCRGSLS 288 (592)
Q Consensus 251 ~~d~g~~~~G~~~~~f~~g~~i-~a~~vI~A~G~~s~vr 288 (592)
+.+ |..+ +||+||+|+|.++.++
T Consensus 142 ~~~---------------g~~~~~a~~vV~a~g~~~~~~ 165 (336)
T 1yvv_A 142 DAE---------------GQNHGPFSHVIIATPAPQAST 165 (336)
T ss_dssp ETT---------------SCEEEEESEEEECSCHHHHGG
T ss_pred eCC---------------CcCccccCEEEEcCCHHHHHH
Confidence 654 4444 5999999999887755
No 32
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.65 E-value=1.1e-14 Score=152.79 Aligned_cols=157 Identities=20% Similarity=0.244 Sum_probs=97.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCc--ccccCccCh----HHH-------HHhhHhhhh
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH--IISGNVFEP----RAL-------NELLPQWKQ 172 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~--~~~g~~i~~----~~l-------~~ll~~~~~ 172 (592)
+++||+|||||++|+++|+.|++. |++|+||||.. ++.. ..+++.+.+ ... .++++.+..
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~------G~~V~lle~~~-~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~l~~ 76 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKR------GEEVTVIEKRF-IGSGSTFRCGTGIRQQFNDEANVRVMKRSVELWKKYSE 76 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSS-TTCSHHHHCCCCCCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCC-CCCCccccccCeeeecCCChHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999 99999999984 4432 234444432 100 011222211
Q ss_pred c-CCCee------eecc-----------------CCcEEEeecCCcc-cCCCC--------CCCCCcEEEcHHHHHHHHH
Q 007716 173 E-EAPIR------VPVS-----------------SDKFWFLTKDRAF-SLPSP--------FSNRGNYVISLSQLVRWLG 219 (592)
Q Consensus 173 ~-~~~~~------~~~~-----------------~~~~~~~~~~~~~-~~~~~--------~~~~~~~~v~~~~l~~~L~ 219 (592)
. +..+. .... ...+.+++..... ..|.. ........++...+.+.|.
T Consensus 77 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 156 (382)
T 1y56_B 77 EYGFSFKQTGYLFLLYDDEEVKTFKRNIEIQNKFGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFA 156 (382)
T ss_dssp HHTCCEECCCEEEEECSHHHHHHHHHHHHHHHHTTCCCEEECHHHHHHSSTTCCCTTCCEEEEETTCCEECHHHHHHHHH
T ss_pred HhCCCeeccceEEEEeCHHHHHHHHHHHHHHHhcCCCcEEeCHHHHHHhCCCCCcccceEEEEcCCCeeECHHHHHHHHH
Confidence 1 10000 0000 0001111110000 01100 0111234578899999999
Q ss_pred HHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 220 GKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 220 ~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
+.+++.|++|+++++|+++..++ +.+.+|++.+ | +++||.||+|+|.++.
T Consensus 157 ~~~~~~Gv~i~~~~~v~~i~~~~-~~v~gv~~~~---------------g-~i~a~~VV~A~G~~s~ 206 (382)
T 1y56_B 157 VKAKEYGAKLLEYTEVKGFLIEN-NEIKGVKTNK---------------G-IIKTGIVVNATNAWAN 206 (382)
T ss_dssp HHHHHTTCEEECSCCEEEEEESS-SBEEEEEETT---------------E-EEECSEEEECCGGGHH
T ss_pred HHHHHCCCEEECCceEEEEEEEC-CEEEEEEECC---------------c-EEECCEEEECcchhHH
Confidence 99999999999999999998876 5676788765 4 7999999999999873
No 33
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.65 E-value=1.3e-14 Score=153.52 Aligned_cols=197 Identities=15% Similarity=0.097 Sum_probs=112.7
Q ss_pred EEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 207 YVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 207 ~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
..++...+.+.|.+.+++.|++|+++++|+++..++ +.+++|++.+ | +++||.||+|+|.++.
T Consensus 169 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~-~~~~~v~~~~---------------g-~~~a~~vV~a~G~~s~ 231 (405)
T 2gag_B 169 GIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDG-EKVTGVKTTR---------------G-TIHAGKVALAGAGHSS 231 (405)
T ss_dssp BBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-SBEEEEEETT---------------C-CEEEEEEEECCGGGHH
T ss_pred ccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeC-CEEEEEEeCC---------------c-eEECCEEEECCchhHH
Confidence 346677999999999999999999999999998875 5677888765 4 7899999999999873
Q ss_pred chHHHHHHcCCCcccccCcccceeeEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEEEEEcCCCeEEEEEEecc-cCC
Q 007716 287 LSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL-NYH 365 (592)
Q Consensus 287 vr~~l~~~~~l~~~~~~~~~~~~~g~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~-~~~ 365 (592)
.+.+.+++.. +.....+...+.+ +........+.. .. ++.|+.|..++.+.+|..... +..
T Consensus 232 ---~l~~~~g~~~-----~~~~~~~~~~~~~--~~~~~~~~~~~~------~~--~~~y~~p~~~g~~~ig~~~~~~~~~ 293 (405)
T 2gag_B 232 ---VLAEMAGFEL-----PIQSHPLQALVSE--LFEPVHPTVVMS------NH--IHVYVSQAHKGELVMGAGIDSYNGY 293 (405)
T ss_dssp ---HHHHHHTCCC-----CEEEEEEEEEEEE--EBCSCCCSEEEE------TT--TTEEEEECTTSEEEEEEEECSSCCC
T ss_pred ---HHHHHcCCCC-----CccccceeEEEec--CCccccCceEEe------CC--CcEEEEEcCCCcEEEEeccCCCCcc
Confidence 2333445542 1111111111111 111111112211 11 236788877888888866532 111
Q ss_pred CCCCCcHHHHHHh----h-cCccccccccCCceeeecceeeecCCccccCcccCCCEEEEcCCC--c--ccCCCCccchH
Q 007716 366 NPFLNPYEEFQKF----K-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAA--G--FLNVPKIKGTH 436 (592)
Q Consensus 366 ~~~~~~~~~~~~~----~-~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~LiGDAA--~--~~~P~~g~G~~ 436 (592)
+...+ .+..+.+ . ..|.+. ..+.... +.|+. ....++..+||+.. + ....+.|.|+.
T Consensus 294 ~~~~~-~~~~~~l~~~~~~~~p~l~----~~~~~~~------w~g~~---~~t~d~~p~ig~~~~~~l~~~~G~~g~G~~ 359 (405)
T 2gag_B 294 GQRGA-FHVIQEQMAAAVELFPIFA----RAHVLRT------WGGIV---DTTMDASPIISKTPIQNLYVNCGWGTGGFK 359 (405)
T ss_dssp SSCCC-THHHHHHHHHHHHHCGGGG----GCEECEE------EEEEE---EEETTSCCEEEECSSBTEEEEECCGGGCST
T ss_pred ccCCC-HHHHHHHHHHHHHhCCccc----cCCcceE------Eeecc---ccCCCCCCEecccCCCCEEEEecCCCchhh
Confidence 11112 1222222 1 123322 1122211 11222 22345677888864 2 22345678999
Q ss_pred HHHHHHHHHHHHHhhh
Q 007716 437 TAMKSGMLAAEAGFGV 452 (592)
Q Consensus 437 ~Am~dg~~aA~~l~~~ 452 (592)
.|...|..+|+.|...
T Consensus 360 ~a~~~g~~la~~i~g~ 375 (405)
T 2gag_B 360 GTPGAGFTLAHTIAND 375 (405)
T ss_dssp THHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCC
Confidence 9999999999998753
No 34
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.62 E-value=2.2e-14 Score=149.22 Aligned_cols=170 Identities=19% Similarity=0.234 Sum_probs=103.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcc--cccCccC------hHHH--------HHhhHh
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI--ISGNVFE------PRAL--------NELLPQ 169 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~--~~g~~i~------~~~l--------~~ll~~ 169 (592)
+++||+|||||++|+++|+.|++. |++|+||||.+.++... .+++++. ...+ .+.+..
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~------G~~V~vlE~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAG------GHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYE 76 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSSCSTTSSSCCEECCCCSSCTTCHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCCCCCCccCcCCccccccCccCCCCCHhHHHHHHHHHHHHH
Confidence 368999999999999999999998 99999999986554322 2333331 1100 011222
Q ss_pred hhh-cCCCee------eeccC------------------CcEEEeecCCccc-CCCC-----CCCCCcEEEcHHHHHHHH
Q 007716 170 WKQ-EEAPIR------VPVSS------------------DKFWFLTKDRAFS-LPSP-----FSNRGNYVISLSQLVRWL 218 (592)
Q Consensus 170 ~~~-~~~~~~------~~~~~------------------~~~~~~~~~~~~~-~~~~-----~~~~~~~~v~~~~l~~~L 218 (592)
+.. .+.+.. ..... ..+.+++...... .|.. ........++...+.+.|
T Consensus 77 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 156 (369)
T 3dme_A 77 YCAARGVPHQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAY 156 (369)
T ss_dssp HHHHHTCCEECCCEEEEECSHHHHTTHHHHHHHHHHTTCCCCEEEEHHHHHHHCTTCCCSEEEEETTCEEECHHHHHHHH
T ss_pred HHHHcCCCcccCCEEEEecCHHHHHHHHHHHHHHHHcCCCceeecCHHHHHHhCCCceeeeeeECCCCEEECHHHHHHHH
Confidence 211 111110 00000 0011111100000 0100 111224467889999999
Q ss_pred HHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHc-CC
Q 007716 219 GGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNF-KL 297 (592)
Q Consensus 219 ~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~-~l 297 (592)
.+.+++.|++|+++++|+++..++++.+ .|.+.+ |+ ..+++||.||+|+|.++ .++.+.+ ++
T Consensus 157 ~~~~~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~------g~-------~~~~~a~~VV~A~G~~s---~~l~~~~~g~ 219 (369)
T 3dme_A 157 QGDAESDGAQLVFHTPLIAGRVRPEGGF-ELDFGG------AE-------PMTLSCRVLINAAGLHA---PGLARRIEGI 219 (369)
T ss_dssp HHHHHHTTCEEECSCCEEEEEECTTSSE-EEEECT------TS-------CEEEEEEEEEECCGGGH---HHHHHTEETS
T ss_pred HHHHHHCCCEEECCCEEEEEEEcCCceE-EEEECC------Cc-------eeEEEeCEEEECCCcch---HHHHHHhcCC
Confidence 9999999999999999999998875534 477654 22 15899999999999985 3666666 66
Q ss_pred C
Q 007716 298 R 298 (592)
Q Consensus 298 ~ 298 (592)
+
T Consensus 220 ~ 220 (369)
T 3dme_A 220 P 220 (369)
T ss_dssp C
T ss_pred C
Confidence 4
No 35
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.62 E-value=1.5e-14 Score=151.45 Aligned_cols=166 Identities=19% Similarity=0.158 Sum_probs=103.0
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCc--ccccCccCh----HHHHHh----hHhhhhcC
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH--IISGNVFEP----RALNEL----LPQWKQEE 174 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~--~~~g~~i~~----~~l~~l----l~~~~~~~ 174 (592)
+.++||+|||||++|+++|+.|+ . |++|+||||.+.+|.. ..+++.+.+ ....++ ...|....
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~------G~~V~vlE~~~~~g~~as~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~ 79 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-A------HGRVVVLEREAQPGYHSTGRSAAHYTVAYGTPQVRALTAASRAFFDNPP 79 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-T------TSCEEEECSSSSTTSSGGGSCCCEECSSSSCHHHHHHHHHHHHHHHSCC
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-C------CCCEEEEECCCCccccccccccceeecccCCHHHHHHHHHHHHHHHHhh
Confidence 34689999999999999999999 6 9999999998766532 233444321 111111 22233211
Q ss_pred CCe-e-eeccCCcE--------------------------EEeecCCcc-cCCC--------CCCCCCcEEEcHHHHHHH
Q 007716 175 API-R-VPVSSDKF--------------------------WFLTKDRAF-SLPS--------PFSNRGNYVISLSQLVRW 217 (592)
Q Consensus 175 ~~~-~-~~~~~~~~--------------------------~~~~~~~~~-~~~~--------~~~~~~~~~v~~~~l~~~ 217 (592)
..+ . ..+..... .+++..... ..|. .........++...+.+.
T Consensus 80 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (381)
T 3nyc_A 80 AGFCEHPLLSPRPEMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQG 159 (381)
T ss_dssp TTSCSSCSEEECCEEEECSSCCHHHHHHHHHHHHHHCTTCEEECHHHHHHHSTTBCGGGCCCEEEETTCEEECHHHHHHH
T ss_pred hhhCCcccccccceEEEechHHHHHHHHHHHHHHHcCCCcEEeCHHHHHHhCCCcccccceEEEEcCCCceECHHHHHHH
Confidence 110 0 00000001 111100000 0010 011122456788999999
Q ss_pred HHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCC
Q 007716 218 LGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKL 297 (592)
Q Consensus 218 L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l 297 (592)
|.+.+++.|++|+++++|+++..+++ . ++|++.+ | +++||.||+|+|.++. .+.+.+++
T Consensus 160 l~~~a~~~Gv~i~~~~~V~~i~~~~~-~-~~V~t~~---------------g-~i~a~~VV~A~G~~s~---~l~~~~g~ 218 (381)
T 3nyc_A 160 YLRGIRRNQGQVLCNHEALEIRRVDG-A-WEVRCDA---------------G-SYRAAVLVNAAGAWCD---AIAGLAGV 218 (381)
T ss_dssp HHHHHHHTTCEEESSCCCCEEEEETT-E-EEEECSS---------------E-EEEESEEEECCGGGHH---HHHHHHTC
T ss_pred HHHHHHHCCCEEEcCCEEEEEEEeCC-e-EEEEeCC---------------C-EEEcCEEEECCChhHH---HHHHHhCC
Confidence 99999999999999999999998764 3 5688765 4 8999999999999863 45455565
Q ss_pred C
Q 007716 298 R 298 (592)
Q Consensus 298 ~ 298 (592)
.
T Consensus 219 ~ 219 (381)
T 3nyc_A 219 R 219 (381)
T ss_dssp C
T ss_pred C
Confidence 3
No 36
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.56 E-value=7.7e-14 Score=158.04 Aligned_cols=156 Identities=14% Similarity=0.064 Sum_probs=98.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCC--cccccCccChH------HH-----------HHh
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGA--HIISGNVFEPR------AL-----------NEL 166 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~--~~~~g~~i~~~------~l-----------~~l 166 (592)
.++||||||||++|+++|+.|++. |++|+||||...+|. ...+++.+.+. .+ .++
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~------G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~a~~~ 336 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRR------GAVVTLYCADAQPAQGASGNRQGALYPLLNGKNDALETFFTSAFTFARRQ 336 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTT------TCCEEEEESSSSTTCSGGGCSCEEECCCCCSSCSHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC------CCcEEEEeCCCccccccccccCCEEecCCCCCChHHHHHHHHHHHHHHHH
Confidence 458999999999999999999999 999999999866653 22334443321 11 122
Q ss_pred hHhhhhcCCCeeeeccCCcEE--------------------------EeecCCc---ccCCCC---CCCCCcEEEcHHHH
Q 007716 167 LPQWKQEEAPIRVPVSSDKFW--------------------------FLTKDRA---FSLPSP---FSNRGNYVISLSQL 214 (592)
Q Consensus 167 l~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~---~~~~~~---~~~~~~~~v~~~~l 214 (592)
+..+...+... ........ +++.... ..++.. ........++...+
T Consensus 337 ~~~l~~~~~~~--~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l 414 (689)
T 3pvc_A 337 YDQLLEQGIAF--DHQWCGVSQLAFDDKSRGKIEKMLHTQWPVEFAEAMSREQLSELAGLDCAHDGIHYPAGGWLCPSDL 414 (689)
T ss_dssp HHHHHHTTCCC--CEECCCEEEECCSHHHHHHHHHHTTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHH
T ss_pred HHHhhhhcccc--ccccCceEEeccCHHHHHHHHHHHhcCCChHHhhccCHHHHHHhcCCCcccceEEecCCeEECHHHH
Confidence 22221111110 00000110 1110000 000000 01122445788999
Q ss_pred HHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccce-EEEcCEEEEecCCCCc
Q 007716 215 VRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGV-ELRGRITLLAEGCRGS 286 (592)
Q Consensus 215 ~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~-~i~a~~vI~A~G~~s~ 286 (592)
.+.|.+.+++.|++|+++++|++++.++++ + .|.+.+ |. +++||.||+|+|.++.
T Consensus 415 ~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v-~V~t~~---------------G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 415 THALMMLAQQNGMTCHYQHELQRLKRIDSQ-W-QLTFGQ---------------SQAAKHHATVILATGHRLP 470 (689)
T ss_dssp HHHHHHHHHHTTCEEEESCCEEEEEECSSS-E-EEEEC----------------CCCCEEESEEEECCGGGTT
T ss_pred HHHHHHHHHhCCCEEEeCCeEeEEEEeCCe-E-EEEeCC---------------CcEEEECCEEEECCCcchh
Confidence 999999999999999999999999988754 4 677765 44 7999999999999975
No 37
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.56 E-value=6.7e-14 Score=158.31 Aligned_cols=157 Identities=14% Similarity=0.114 Sum_probs=99.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCC--cccccCccCh------HHHHHh--------hHhh
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGA--HIISGNVFEP------RALNEL--------LPQW 170 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~--~~~~g~~i~~------~~l~~l--------l~~~ 170 (592)
.+||||||||++|+++|+.|++. |++|+||||...+|+ ...+++.+.+ ..+.++ ...|
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~------G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRR------GWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFY 345 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT------TCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHH
Confidence 48999999999999999999999 999999999766652 2234444332 112111 1112
Q ss_pred hhcCCCeeeec------------------------cCCcEEEeecCCc---ccCCCC---CCCCCcEEEcHHHHHHHHHH
Q 007716 171 KQEEAPIRVPV------------------------SSDKFWFLTKDRA---FSLPSP---FSNRGNYVISLSQLVRWLGG 220 (592)
Q Consensus 171 ~~~~~~~~~~~------------------------~~~~~~~~~~~~~---~~~~~~---~~~~~~~~v~~~~l~~~L~~ 220 (592)
...+....... ..+.+.+++.... ..++.. ........++...+.+.|.+
T Consensus 346 ~~l~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~ 425 (676)
T 3ps9_A 346 DQLPVKFDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLE 425 (676)
T ss_dssp HHCCSCCCEECCCEEEECCSHHHHHHHHHHHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHH
T ss_pred HHCCCCcCcCcCCeeeecCCHHHHHHHHHHHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCCeeeCHHHHHHHHHH
Confidence 22111110000 0000111110000 001100 11122456788999999999
Q ss_pred HHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 221 KAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 221 ~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
.+++.|++|+++++|+++..+++ .+ +|++.+ |.+++||.||+|+|.++.
T Consensus 426 ~a~~~Gv~i~~~t~V~~l~~~~~-~v-~V~t~~---------------G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 426 LAQQQGLQIYYQYQLQNFSRKDD-CW-LLNFAG---------------DQQATHSVVVLANGHQIS 474 (676)
T ss_dssp HHHHTTCEEEESCCEEEEEEETT-EE-EEEETT---------------SCEEEESEEEECCGGGGG
T ss_pred HHHhCCCEEEeCCeeeEEEEeCC-eE-EEEECC---------------CCEEECCEEEECCCcchh
Confidence 99999999999999999998774 33 677765 567999999999999875
No 38
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.55 E-value=2e-13 Score=143.42 Aligned_cols=70 Identities=19% Similarity=0.208 Sum_probs=55.5
Q ss_pred cEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCC
Q 007716 206 NYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (592)
Q Consensus 206 ~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s 285 (592)
...++...+.+.|.+.+++.|++|+++++|+++..++++ + .|++.+ .+++||.||+|+|.++
T Consensus 144 ~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~-~v~~~~----------------g~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 144 SGVLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDS-V-KIETAN----------------GSYTADKLIVSMGAWN 205 (389)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC-E-EEEETT----------------EEEEEEEEEECCGGGH
T ss_pred CcEEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe-E-EEEeCC----------------CEEEeCEEEEecCccH
Confidence 345778899999999999999999999999999987644 3 466654 4799999999999885
Q ss_pred cchHHHHHHcC
Q 007716 286 SLSEKLIKNFK 296 (592)
Q Consensus 286 ~vr~~l~~~~~ 296 (592)
. .+.+.++
T Consensus 206 ~---~l~~~~g 213 (389)
T 2gf3_A 206 S---KLLSKLN 213 (389)
T ss_dssp H---HHGGGGT
T ss_pred H---HHhhhhc
Confidence 3 4444444
No 39
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.54 E-value=7.7e-13 Score=146.08 Aligned_cols=218 Identities=14% Similarity=0.138 Sum_probs=113.0
Q ss_pred EEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 207 YVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 207 ~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
..++...+...|.+.+++.|++|+++++|+++..++ +.+++|++.| ..+|+ +.+++||.||.|+|.++.
T Consensus 165 g~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~-g~v~gV~~~d---~~tg~-------~~~i~A~~VV~AaG~~s~ 233 (561)
T 3da1_A 165 YRTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQ-GKVVGVVAKD---RLTDT-------THTIYAKKVVNAAGPWVD 233 (561)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEET-TEEEEEEEEE---TTTCC-------EEEEEEEEEEECCGGGHH
T ss_pred ceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC-CeEEEEEEEE---cCCCc-------eEEEECCEEEECCCcchH
Confidence 357889999999999999999999999999999876 6778888865 12332 368999999999999863
Q ss_pred chHHHHHHcCCCcccccCcccceeeEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEEEEEcCCCeEEEEEEecc---c
Q 007716 287 LSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL---N 363 (592)
Q Consensus 287 vr~~l~~~~~l~~~~~~~~~~~~~g~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~---~ 363 (592)
++.+..+... ..+-...-|...+ ++.........+ .+..+ .++ ...|++|. ++.+.||..... +
T Consensus 234 ---~l~~~~g~~~---~~~v~p~kG~~lv--l~~~~~~~~~~~-~~~~~-~dg--r~v~~iP~-~g~~~iGtT~~~~~~~ 300 (561)
T 3da1_A 234 ---TLREKDRSKH---GKYLKLSKGVHLV--VDQSRFPLRQAV-YFDTE-SDG--RMIFAIPR-EGKTYIGTTDTFYDKD 300 (561)
T ss_dssp ---HHHHTTTCCC---SSEEEEEEEEEEE--EEGGGSCCSSEE-EECCS-SSC--CCEEEEEE-TTEEEECCCCEEECSC
T ss_pred ---HHHHhcCCCC---CceEEeccEEEEE--ECCccCCCceEE-EeccC-CCC--cEEEEEec-CCCEEEcCCCCccCCC
Confidence 4444445431 0111112232222 222111112221 11111 122 23678888 557777754321 1
Q ss_pred CCCCCCCcHHHHHHhhc-----CccccccccCCceee--ecceeeecCCccccCcccCCCEEEEcCCCcccCCCCccchH
Q 007716 364 YHNPFLNPYEEFQKFKH-----HPAIKPLLEGGTVVQ--YGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTH 436 (592)
Q Consensus 364 ~~~~~~~~~~~~~~~~~-----~p~i~~~l~~~~~~~--~~~~~i~~gg~~~~p~~~~~~v~LiGDAA~~~~P~~g~G~~ 436 (592)
..++..++ ++.+.+.. .|.+. +.....+. .|.|.+...+-......+.+.++..+ ..+.++-+.|+ +.
T Consensus 301 ~~~~~~t~-~~i~~ll~~~~~~~P~l~--~~~~~v~~~~aGlRPl~~~~~~~~~~~sR~~~i~~~-~~gli~i~Ggk-~T 375 (561)
T 3da1_A 301 IASPRMTV-EDRDYILAAANYMFPSLR--LTADDVESSWAGLRPLIHEEGKKASEISRKDEIFFS-DSGLISIAGGK-LT 375 (561)
T ss_dssp TTCCCCCH-HHHHHHHHHHHHHCTTCC--CCTTTEEEEEEEEEEEEEC-----------CCEEEC-SSCCEEECCCC-ST
T ss_pred cCCCCCCH-HHHHHHHHHHHHhCCCCC--CChhhEEEEeEEeccccCCCCCCccccccceEEEec-CCCeEEEeCCh-hh
Confidence 12333332 22233221 23221 11222222 13343322110111122334444444 47888888888 66
Q ss_pred HHHHHHHHHHHHHhhhc
Q 007716 437 TAMKSGMLAAEAGFGVL 453 (592)
Q Consensus 437 ~Am~dg~~aA~~l~~~~ 453 (592)
++..=|..+.+.+.+.+
T Consensus 376 t~r~mAe~~~d~~~~~~ 392 (561)
T 3da1_A 376 GYRKMAERTVDAVAQGL 392 (561)
T ss_dssp THHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhc
Confidence 66655665665555544
No 40
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.52 E-value=5.2e-13 Score=140.93 Aligned_cols=71 Identities=23% Similarity=0.226 Sum_probs=55.4
Q ss_pred cEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCC
Q 007716 206 NYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (592)
Q Consensus 206 ~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s 285 (592)
...++...+.+.|.+.+++.|++|+++++|++++.+++ .+ .|.+.+ .+++||.||+|+|+++
T Consensus 147 ~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~-~v-~v~t~~----------------g~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 147 GGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPDAD-GV-SVTTDR----------------GTYRAGKVVLACGPYT 208 (397)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETT-EE-EEEESS----------------CEEEEEEEEECCGGGH
T ss_pred CCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCC-eE-EEEECC----------------CEEEcCEEEEcCCcCh
Confidence 44678889999999999999999999999999988763 34 466543 4799999999999985
Q ss_pred cchHHHHHHcCC
Q 007716 286 SLSEKLIKNFKL 297 (592)
Q Consensus 286 ~vr~~l~~~~~l 297 (592)
. .+.+.++.
T Consensus 209 ~---~l~~~~g~ 217 (397)
T 2oln_A 209 N---DLLEPLGA 217 (397)
T ss_dssp H---HHHGGGTC
T ss_pred H---HHhhhcCC
Confidence 3 34444454
No 41
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.51 E-value=2.3e-12 Score=140.46 Aligned_cols=217 Identities=15% Similarity=0.025 Sum_probs=114.9
Q ss_pred EEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 207 YVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 207 ~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
..++...+...|.+.+++.|++|+++++|+++..++ .+++|++.|. .+|+. .+++||.||+|+|.++.
T Consensus 144 g~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~---~~G~~-------~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 144 CWVDDARLVLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDI---DTGKK-------YSWQARGLVNATGPWVK 211 (501)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEET---TTCCE-------EEEEESCEEECCGGGHH
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEEC---CCCCE-------EEEECCEEEECCChhHH
Confidence 347899999999999999999999999999998865 4667877430 12221 37999999999999964
Q ss_pred chHHHHHH-cCCCcccccCcccceeeEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEEEEEcCCCeEEEEEEecc---
Q 007716 287 LSEKLIKN-FKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL--- 362 (592)
Q Consensus 287 vr~~l~~~-~~l~~~~~~~~~~~~~g~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~--- 362 (592)
.+.+. ++... ..+-...-|...+ ++.. ....... .+ +..++ .+.|++|..++.+.+|.....
T Consensus 212 ---~l~~~~l~~~~---~~~i~p~rG~~~~--~~~~-~~~~~~~-~~--~~~dg--~~~~~~P~~~g~~~iG~t~~~~~~ 277 (501)
T 2qcu_A 212 ---QFFDDGMHLPS---PYGIRLIKGSHIV--VPRV-HTQKQAY-IL--QNEDK--RIVFVIPWMDEFSIIGTTDVEYKG 277 (501)
T ss_dssp ---HHHHHHTCCCC---SSCBCCEEEEEEE--EECS-SSCSCEE-EE--ECTTS--CEEEEEEETTTEEEEECCCEECCS
T ss_pred ---HHHHHhccCCc---ccccccceeEEEE--ECCC-CCCceEE-Ee--ecCCC--CEEEEEEcCCCcEEEcCCCCCCCC
Confidence 34332 33220 0011111122212 2211 1111111 11 11121 246888988777777754211
Q ss_pred cCCCCCCCcHHHHHHhh----c-CccccccccCCceee-e-cceeeecCCccccCcccCCCEEE--EcCCCcccCCCCcc
Q 007716 363 NYHNPFLNPYEEFQKFK----H-HPAIKPLLEGGTVVQ-Y-GARTLNEGGLQSIPYPVFPGGAI--IGCAAGFLNVPKIK 433 (592)
Q Consensus 363 ~~~~~~~~~~~~~~~~~----~-~p~i~~~l~~~~~~~-~-~~~~i~~gg~~~~p~~~~~~v~L--iGDAA~~~~P~~g~ 433 (592)
+..++..++ ++.+.+. . .| ..+...+.+. | |.+.+...+.....+...+.++. .++..+.+-...|.
T Consensus 278 ~~~~~~~~~-~~~~~l~~~~~~~~p---~~l~~~~v~~~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~Gg 353 (501)
T 2qcu_A 278 DPKAVKIEE-SEINYLLNVYNTHFK---KQLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGG 353 (501)
T ss_dssp CGGGCCCCH-HHHHHHHHHHHHHBS---SCCCGGGCCEEEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEECC
T ss_pred CcCCCCCCH-HHHHHHHHHHHHhcC---CCCCcccEEEEEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEEEeCc
Confidence 111222222 2222221 1 23 0122222221 1 33333332221112233355665 56665555556677
Q ss_pred chHHHHHHHHHHHHHHhhhc
Q 007716 434 GTHTAMKSGMLAAEAGFGVL 453 (592)
Q Consensus 434 G~~~Am~dg~~aA~~l~~~~ 453 (592)
|+.++..-|..+++.+.+.+
T Consensus 354 ~~t~~~~~Ae~~~~~~~~~~ 373 (501)
T 2qcu_A 354 KLTTYRKLAEHALEKLTPYY 373 (501)
T ss_dssp CGGGHHHHHHHHHHHHGGGS
T ss_pred cccchHHHHHHHHHHHHHhh
Confidence 88888777777777777654
No 42
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.48 E-value=2e-13 Score=139.80 Aligned_cols=158 Identities=22% Similarity=0.319 Sum_probs=104.5
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHH-----HHHhhHhhhhcCCCeee
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRA-----LNELLPQWKQEEAPIRV 179 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~-----l~~ll~~~~~~~~~~~~ 179 (592)
.+++||+|||||++||++|+.|++. .+|++|+|||+...+|+.+..++.+.... ..+++..+. .++..
T Consensus 77 ~~~~DVvIVGgG~AGL~aA~~La~~----~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~G---v~~~~ 149 (344)
T 3jsk_A 77 HAETDIVIVGAGSCGLSAAYVLSTL----RPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVG---VPYED 149 (344)
T ss_dssp HHBCSEEEECCSHHHHHHHHHHHHH----CTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHT---CCCEE
T ss_pred cCcCCEEEECccHHHHHHHHHHHhc----CCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcC---Ccccc
Confidence 3579999999999999999999985 24899999999988776544333322110 011222221 11110
Q ss_pred eccCCcEEEeecCCcccCCCCCCCCCcEE--EcHHHHHHHHHHHHHH-cCCEEecCceEEEEEEcCC-------------
Q 007716 180 PVSSDKFWFLTKDRAFSLPSPFSNRGNYV--ISLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDAD------------- 243 (592)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~l~~~L~~~a~~-~Gv~i~~g~~v~~i~~~~~------------- 243 (592)
.+.|. .+..++.+.|.+++.+ .|+++++++.|+++..+++
T Consensus 150 ------------------------~G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~ 205 (344)
T 3jsk_A 150 ------------------------EGDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEA 205 (344)
T ss_dssp ------------------------CSSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC-------------
T ss_pred ------------------------cCCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCccccccccccccc
Confidence 01111 1357888999999988 5999999999999988763
Q ss_pred ---C--cEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHH
Q 007716 244 ---N--KVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKN 294 (592)
Q Consensus 244 ---g--~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~ 294 (592)
+ +|.+|.+.+.-+..+|..+... ++.+++||+||+|||..+.+++.+.++
T Consensus 206 ~~~g~~rV~GVv~~~~~v~~~g~~~~~~-d~~~i~Ak~VV~ATG~~s~v~~~~~~~ 260 (344)
T 3jsk_A 206 EDEAKVRIAGVVTNWTLVSMHHDDQSAM-DPNTINAPVIISTTGHDGPFGAFSVKR 260 (344)
T ss_dssp ---CCEEEEEEEEEEHHHHTTSSSSSCC-BCEEEECSEEEECCCSSSSSSCHHHHH
T ss_pred ccCCCceEeEEEeeeeeeeccCCccccc-CceEEEcCEEEECCCCCchhhHHHHHH
Confidence 3 6788877532222233211111 247899999999999999987776544
No 43
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.47 E-value=9.7e-13 Score=141.27 Aligned_cols=74 Identities=16% Similarity=0.244 Sum_probs=58.5
Q ss_pred cEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEc--------------CCCcEEEEEeccCcccCCCCcccccccceE
Q 007716 206 NYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYD--------------ADNKVIGIGTNDMGIAKDGSKKENFQRGVE 271 (592)
Q Consensus 206 ~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~--------------~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~ 271 (592)
...++...+.+.|.+.+++.|++|+++++|+++..+ +++.+++|.+.+ | +
T Consensus 175 ~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~---------------g-~ 238 (448)
T 3axb_A 175 AGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSD---------------G-T 238 (448)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETT---------------S-C
T ss_pred CeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCC---------------C-E
Confidence 445778899999999999999999999999999872 335666788765 4 6
Q ss_pred E--EcCEEEEecCCCCcchHHHHHHcCCC
Q 007716 272 L--RGRITLLAEGCRGSLSEKLIKNFKLR 298 (592)
Q Consensus 272 i--~a~~vI~A~G~~s~vr~~l~~~~~l~ 298 (592)
+ +||.||+|+|.++. ++.+.+++.
T Consensus 239 i~~~Ad~VV~AtG~~s~---~l~~~~g~~ 264 (448)
T 3axb_A 239 RVEVGEKLVVAAGVWSN---RLLNPLGID 264 (448)
T ss_dssp EEEEEEEEEECCGGGHH---HHHGGGTCC
T ss_pred EeecCCEEEECCCcCHH---HHHHHcCCC
Confidence 8 99999999999863 455555544
No 44
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.46 E-value=5e-13 Score=147.97 Aligned_cols=174 Identities=19% Similarity=0.224 Sum_probs=105.8
Q ss_pred ccccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcc-cccCccCh------------HHHHHhhHhh
Q 007716 104 ESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI-ISGNVFEP------------RALNELLPQW 170 (592)
Q Consensus 104 ~~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~-~~g~~i~~------------~~l~~ll~~~ 170 (592)
...++||||||||++||++|+.|++. |++|+||||.+.+|+.. .+++.+.. ....+++.++
T Consensus 118 ~~~~~DVvVVG~G~aGl~aA~~la~~------G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~ 191 (566)
T 1qo8_A 118 PSETTQVLVVGAGSAGFNASLAAKKA------GANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDA 191 (566)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHH------TCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHH
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHC------CCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHH
Confidence 34579999999999999999999999 99999999998877654 34443311 0111111111
Q ss_pred hhcCCCeeee----------------ccCCcEEE--eecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecC
Q 007716 171 KQEEAPIRVP----------------VSSDKFWF--LTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPG 232 (592)
Q Consensus 171 ~~~~~~~~~~----------------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g 232 (592)
.......... .....+.+ +.......++.... .....+....+.+.|.+.+++.||+|+++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~-~~~~~~~~~~l~~~L~~~~~~~gv~i~~~ 270 (566)
T 1qo8_A 192 MKGGRQQNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHR-PHGGKSSGPEIIDTLRKAAKEQGIDTRLN 270 (566)
T ss_dssp HHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEE-CSSSSCHHHHHHHHHHHHHHHTTCCEECS
T ss_pred HHhcCCCCCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceee-cCCCCCCHHHHHHHHHHHHHhcCCEEEeC
Confidence 1100000000 00000000 00000000110000 00011346789999999999999999999
Q ss_pred ceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcC
Q 007716 233 FAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFK 296 (592)
Q Consensus 233 ~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~ 296 (592)
++|++++.+++++|++|++.+ .+|+. .+++||.||+|+|+++..++ +++.+.
T Consensus 271 ~~v~~l~~~~~g~v~Gv~~~~----~~g~~-------~~i~A~~VVlAtGg~s~~~~-~~~~~~ 322 (566)
T 1qo8_A 271 SRVVKLVVNDDHSVVGAVVHG----KHTGY-------YMIGAKSVVLATGGYGMNKE-MIAYYR 322 (566)
T ss_dssp EEEEEEEECTTSBEEEEEEEE----TTTEE-------EEEEEEEEEECCCCCTTCHH-HHHHHC
T ss_pred CEEEEEEECCCCcEEEEEEEe----CCCcE-------EEEEcCEEEEecCCcccCHH-HHHHhC
Confidence 999999987647888888753 23321 37999999999999999755 444554
No 45
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.46 E-value=1.5e-11 Score=133.89 Aligned_cols=62 Identities=16% Similarity=0.146 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCcchH
Q 007716 212 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSE 289 (592)
Q Consensus 212 ~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~ 289 (592)
..|.+.|.+.+++.|++|+++++|++|+.++ +++++|++.| |.++.||.||.+.+.....++
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~-~~~~gV~~~~---------------g~~~~ad~VV~~a~~~~~~~~ 282 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTG-NKIEAVHLED---------------GRRFLTQAVASNADVVHTYRD 282 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETT---------------SCEEECSCEEECCC-------
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeC-CeEEEEEecC---------------CcEEEcCEEEECCCHHHHHHH
Confidence 5788899999999999999999999999887 7788999987 789999999999988765443
No 46
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.44 E-value=1.3e-12 Score=142.89 Aligned_cols=71 Identities=28% Similarity=0.361 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcC-EEEEecCCCCcchHHH
Q 007716 213 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGR-ITLLAEGCRGSLSEKL 291 (592)
Q Consensus 213 ~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~-~vI~A~G~~s~vr~~l 291 (592)
.+.+.|.+.+++.||+|+++++|++++.+++++|++|.+.+ +|+ ..+++|+ .||+|+|+.+.-. ++
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~-----~g~-------~~~i~A~k~VVlAtGG~~~n~-~m 269 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ-----YGK-------EVAVRARRGVVLATGSFAYND-KM 269 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEE-----TTE-------EEEEEEEEEEEECCCCCTTCH-HH
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEE-----CCc-------EEEEEeCCeEEEeCCChhhCH-HH
Confidence 78999999999999999999999999998668899998764 222 1479995 9999999999743 45
Q ss_pred HHHcC
Q 007716 292 IKNFK 296 (592)
Q Consensus 292 ~~~~~ 296 (592)
++++.
T Consensus 270 ~~~~~ 274 (510)
T 4at0_A 270 IEAHA 274 (510)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 55553
No 47
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.44 E-value=8.9e-13 Score=141.70 Aligned_cols=155 Identities=23% Similarity=0.341 Sum_probs=94.6
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCccc-ccCc--c--ChHHHHHhhHhhhhcCCCeee
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII-SGNV--F--EPRALNELLPQWKQEEAPIRV 179 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~-~g~~--i--~~~~l~~ll~~~~~~~~~~~~ 179 (592)
.|++||||||||++|+++|+.|++. |++|+||||.+.+|.... +|+. . +.....+++..+.........
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~------G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEE------GANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYS 97 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHH
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHC------CCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHH
Confidence 4679999999999999999999998 999999999987765431 2211 0 000111111111000000000
Q ss_pred ---ecc-CCcEEEeecCCcccCCCCCCCCCcEEE----cHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEe
Q 007716 180 ---PVS-SDKFWFLTKDRAFSLPSPFSNRGNYVI----SLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGT 251 (592)
Q Consensus 180 ---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v----~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~ 251 (592)
... .+.+.++.. ..+.+. . ...+.++ ....+.+.|.+.+++.||+|+++++|+++..++ +.+++|++
T Consensus 98 ~~~~~~~~~~~~~~~~-~G~~~~--~-~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~-~~v~~V~~ 172 (447)
T 2i0z_A 98 AFSIFNNEDIITFFEN-LGVKLK--E-EDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN-GQTKAVIL 172 (447)
T ss_dssp HHHHSCHHHHHHHHHH-TTCCEE--E-CGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEE
T ss_pred HHHhcCHHHHHHHHHh-cCCceE--E-eeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC-CcEEEEEE
Confidence 000 000000000 000000 0 0011222 257889999999999999999999999998765 66678887
Q ss_pred ccCcccCCCCcccccccceEEEcCEEEEecCCCC
Q 007716 252 NDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (592)
Q Consensus 252 ~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s 285 (592)
.+ |.+++||.||+|+|++|
T Consensus 173 ~~---------------G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 173 QT---------------GEVLETNHVVIAVGGKS 191 (447)
T ss_dssp TT---------------CCEEECSCEEECCCCSS
T ss_pred CC---------------CCEEECCEEEECCCCCc
Confidence 65 55799999999999999
No 48
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.43 E-value=6.4e-13 Score=130.58 Aligned_cols=41 Identities=34% Similarity=0.499 Sum_probs=37.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~ 152 (592)
|.+||+|||||||||+||+.|++. |++|+||||.+.+|+.+
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~------G~~V~v~Ek~~~~GG~~ 41 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAA------GHQVHLFDKSRGSGGRM 41 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCGGG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCCCCCCcc
Confidence 579999999999999999999999 99999999999998765
No 49
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.43 E-value=1.9e-12 Score=138.56 Aligned_cols=159 Identities=21% Similarity=0.276 Sum_probs=101.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCCCCCCccccc---CccC----h----------HHHHHhh
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAEVGAHIISG---NVFE----P----------RALNELL 167 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~~~g~~~~~g---~~i~----~----------~~l~~ll 167 (592)
.++||||||||++||++|+.|++. |+ +|+||||....++..... ..+. . ....+-+
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~~------G~~~V~vlE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 78 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLARR------GYTNVTVLDPYPVPSAISAGNDVNKVISSGQYSNNKDEIEVNEILAEEAF 78 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT------TCCCEEEEESSCSSCTTCTTCSSCEEECCCCSCCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHc------CCCcEEEEeCCCCCCCCccCCCCccEEEeccCCchhhhcchhHHHHHHHH
Confidence 468999999999999999999999 99 999999988655432111 0110 0 1111222
Q ss_pred HhhhhcC---C-----C-eeeecc---------------CCcE-EEeecCCc-ccCCC-----------CCCCCCc-EEE
Q 007716 168 PQWKQEE---A-----P-IRVPVS---------------SDKF-WFLTKDRA-FSLPS-----------PFSNRGN-YVI 209 (592)
Q Consensus 168 ~~~~~~~---~-----~-~~~~~~---------------~~~~-~~~~~~~~-~~~~~-----------~~~~~~~-~~v 209 (592)
..|.... . . +..... ...+ .+++.... -.+|. ....... ..+
T Consensus 79 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~l~~~~~~g~~g~~~~~~~g~~ 158 (438)
T 3dje_A 79 NGWKNDPLFKPYYHDTGLLMSACSQEGLDRLGVRVRPGEDPNLVELTRPEQFRKLAPEGVLQGDFPGWKGYFARSGAGWA 158 (438)
T ss_dssp HHHHHCTTTGGGEECCCEEEEECSHHHHHHHHHHHCGGGCTTCEEECSHHHHHTTSCTTTSCSCCTTCEEEEESSSCEEE
T ss_pred HHHhhCccccCcEeccceEEEecCcchHHHHHHHHhhcccCCceecCCHHHHHHhCCcccccCCCCCceEEEeCCCCEEe
Confidence 3343211 0 0 000000 0001 11111000 00111 1111224 567
Q ss_pred cHHHHHHHHHHHHHHcCCEEecCc---eEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 210 SLSQLVRWLGGKAEELGVEIYPGF---AASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 210 ~~~~l~~~L~~~a~~~Gv~i~~g~---~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
+...+.+.|.+.+++.||+|++++ +|++|..++ +.+.+|++.+ |.+++||.||+|+|+++.
T Consensus 159 ~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~-~~v~gV~t~~---------------G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 159 HARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN-NDVKGAVTAD---------------GKIWRAERTFLCAGASAG 222 (438)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET-TEEEEEEETT---------------TEEEECSEEEECCGGGGG
T ss_pred cHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC-CeEEEEEECC---------------CCEEECCEEEECCCCChh
Confidence 788999999999999999999999 999998876 6677898876 568999999999999974
No 50
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.42 E-value=1.4e-12 Score=142.66 Aligned_cols=153 Identities=19% Similarity=0.320 Sum_probs=99.7
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccc------cCccCh------------------
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIIS------GNVFEP------------------ 160 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~------g~~i~~------------------ 160 (592)
.+++|||||||||+|+++|+.|++. |++|+|||++..++..... ...+.+
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~------G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgk 178 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQM------GFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGK 178 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHT------TCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC------CCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCc
Confidence 3568999999999999999999998 9999999998765321100 000000
Q ss_pred --------H-HHHHhhHhhhhcCCCeeeeccCCcEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEec
Q 007716 161 --------R-ALNELLPQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYP 231 (592)
Q Consensus 161 --------~-~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~ 231 (592)
. ...+++..|...+.+.. +... .... ........+.+.|.+.+++.|++|++
T Consensus 179 l~~~i~~~~~~~~~v~~~~~~~G~~~~----------------i~~~-~~p~--~G~~~~~~l~~~L~~~l~~~Gv~I~~ 239 (549)
T 3nlc_A 179 LYSQVKDPNFYGRKVITEFVEAGAPEE----------------ILYV-SKPH--IGTFKLVTMIEKMRATIIELGGEIRF 239 (549)
T ss_dssp CCCCSCCTTCHHHHHHHHHHHTTCCGG----------------GGTB-SSCC--CCHHHHHHHHHHHHHHHHHTTCEEES
T ss_pred eEEEeccccccHHHHHHHHHHcCCCce----------------Eeec-cccc--cccchHHHHHHHHHHHHHhcCCEEEe
Confidence 0 00111111111111100 0000 0000 01124578889999999999999999
Q ss_pred CceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 007716 232 GFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (592)
Q Consensus 232 g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~ 298 (592)
+++|+++..++ +.+++|++.+ |.++.||.||+|+|.++.-...+....++.
T Consensus 240 ~t~V~~I~~~~-~~v~gV~l~~---------------G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~ 290 (549)
T 3nlc_A 240 STRVDDLHMED-GQITGVTLSN---------------GEEIKSRHVVLAVGHSARDTFEMLHERGVY 290 (549)
T ss_dssp SCCEEEEEESS-SBEEEEEETT---------------SCEEECSCEEECCCTTCHHHHHHHHHTTCC
T ss_pred CCEEEEEEEeC-CEEEEEEECC---------------CCEEECCEEEECCCCChhhHHHHHHHcCCC
Confidence 99999998876 5677888876 678999999999999996433455566766
No 51
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.41 E-value=1.9e-12 Score=130.50 Aligned_cols=146 Identities=23% Similarity=0.328 Sum_probs=96.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCccc-ccCccChH----HHHHhhHhhhhcCCCeeee
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII-SGNVFEPR----ALNELLPQWKQEEAPIRVP 180 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~-~g~~i~~~----~l~~ll~~~~~~~~~~~~~ 180 (592)
.++||+|||||++|+++|+.|++. +|++|+||||...+++.+. +++.+..- ...+++..+ +.++.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~-----~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~---G~~~~-- 107 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKN-----PNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEI---GVAYD-- 107 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTS-----TTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHH---TCCCE--
T ss_pred cccCEEEECccHHHHHHHHHHHHc-----CCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHc---CCCcc--
Confidence 468999999999999999999983 2899999999987765432 22222110 001111111 11110
Q ss_pred ccCCcEEEeecCCcccCCCCCCCCCcEEE--cHHHHHHHHHHHHHH-cCCEEecCceEEEEEEcCCCcEEEEEeccC---
Q 007716 181 VSSDKFWFLTKDRAFSLPSPFSNRGNYVI--SLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDM--- 254 (592)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~l~~~L~~~a~~-~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~--- 254 (592)
..+.|.+ +...+...|.+++.+ .|++++++++|+++..++ +.+.+|.+.+.
T Consensus 108 ----------------------~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~-~~v~gv~~~~~~~~ 164 (284)
T 1rp0_A 108 ----------------------EQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-NRVGGVVTNWALVA 164 (284)
T ss_dssp ----------------------ECSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEET-TEEEEEEEEEHHHH
T ss_pred ----------------------cCCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecC-CeEEEEEEeccccc
Confidence 0112333 567888889988876 699999999999998876 56767776420
Q ss_pred -c--ccCCCCcccccccceEEEcCEEEEecCCCCcchHHH
Q 007716 255 -G--IAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKL 291 (592)
Q Consensus 255 -g--~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l 291 (592)
. ...+|+ ..+++||.||+|+|.+|.++...
T Consensus 165 ~~~~~g~~g~-------~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 165 QNHHTQSCMD-------PNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp TCTTTSSCCC-------CEEEEEEEEEECCCSSSTTTTHH
T ss_pred cccCccccCc-------eEEEECCEEEECCCCchHHHHHH
Confidence 0 001122 26799999999999999876543
No 52
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.41 E-value=5.3e-12 Score=139.86 Aligned_cols=173 Identities=18% Similarity=0.178 Sum_probs=103.6
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcc-cccCccCh---H---------HHHHhhHhhh
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI-ISGNVFEP---R---------ALNELLPQWK 171 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~-~~g~~i~~---~---------~l~~ll~~~~ 171 (592)
..++||||||||+|||++|+.|++. |++|+||||.+.+|+.. .+++.+.. . ...+++.++.
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~------G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~ 197 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDS------GAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTM 197 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHC------CCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHH
Confidence 3469999999999999999999999 99999999999887654 34433210 0 0111111111
Q ss_pred hcCCCeeee----------------ccCCcEEE--eecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCc
Q 007716 172 QEEAPIRVP----------------VSSDKFWF--LTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGF 233 (592)
Q Consensus 172 ~~~~~~~~~----------------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~ 233 (592)
......... .....+.+ +.......++...... ........+.+.|.+.+++.||+|++++
T Consensus 198 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~-~g~~~g~~l~~~L~~~~~~~gv~i~~~~ 276 (571)
T 1y0p_A 198 KGGQNINDPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPT-GGAGVGAHVVQVLYDNAVKRNIDLRMNT 276 (571)
T ss_dssp HHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEEST-TTCCHHHHHHHHHHHHHHHTTCEEESSE
T ss_pred HhcCCCCCHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecC-CCCCCHHHHHHHHHHHHHhcCCEEEeCC
Confidence 000000000 00000000 0000000000000000 0013457899999999999999999999
Q ss_pred eEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcC
Q 007716 234 AASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFK 296 (592)
Q Consensus 234 ~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~ 296 (592)
+|++++.+++++|++|++.+ .+|+. .+++||.||+|+|+++..++ ++..+.
T Consensus 277 ~v~~l~~~~~g~v~Gv~~~~----~~g~~-------~~i~a~~VVlAtGg~~~n~~-~~~~~~ 327 (571)
T 1y0p_A 277 RGIEVLKDDKGTVKGILVKG----MYKGY-------YWVKADAVILATGGFAKNNE-RVAKLD 327 (571)
T ss_dssp EEEEEEECTTSCEEEEEEEE----TTTEE-------EEEECSEEEECCCCCTTCHH-HHHHHC
T ss_pred EeeEeEEcCCCeEEEEEEEe----CCCcE-------EEEECCeEEEeCCCcccCHH-HHHHhC
Confidence 99999987657888887753 23321 47999999999999998654 444443
No 53
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.40 E-value=1.5e-11 Score=130.38 Aligned_cols=158 Identities=16% Similarity=0.150 Sum_probs=91.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcc-cccC-cc-ChH--------HHHHhhHhhhhc-
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI-ISGN-VF-EPR--------ALNELLPQWKQE- 173 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~-~~g~-~i-~~~--------~l~~ll~~~~~~- 173 (592)
..+||||||||++|+++|+.|++. .||++|+|||+....++.. .+++ .+ .+. ...+-+..|...
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~----~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~ 110 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQL----APGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGAL 110 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHH----CTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGG
T ss_pred CcCCEEEECCcHHHHHHHHHHHhc----CCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHh
Confidence 358999999999999999999986 3589999999986443322 2334 33 211 111112233321
Q ss_pred CCCeeeeccCCcE-E---------EeecCC-cccC---------CC---CCCCCCcEEEcHHHHHHHHHHHHHHcCCEEe
Q 007716 174 EAPIRVPVSSDKF-W---------FLTKDR-AFSL---------PS---PFSNRGNYVISLSQLVRWLGGKAEELGVEIY 230 (592)
Q Consensus 174 ~~~~~~~~~~~~~-~---------~~~~~~-~~~~---------~~---~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~ 230 (592)
+......+..... . +++... ...+ +. .........++...+.+.|.+.+++.|++|+
T Consensus 111 ~~~~~~~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~ 190 (405)
T 3c4n_A 111 GSGKTLEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGLL 190 (405)
T ss_dssp GSSCCCCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEEE
T ss_pred CCCCCCcEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEEE
Confidence 0000000000010 0 011000 0000 00 0011224567889999999999999999999
Q ss_pred cCceEE---------EEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCC
Q 007716 231 PGFAAS---------EILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (592)
Q Consensus 231 ~g~~v~---------~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s 285 (592)
++++|+ ++..++ +.+ +|.+.+ | +++||.||+|+|.++
T Consensus 191 ~~~~v~~~~g~~~~~~i~~~~-~~v-~v~~~~---------------g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 191 LNTRAELVPGGVRLHRLTVTN-THQ-IVVHET---------------R-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp CSCEEEEETTEEEEECBCC---------CBCC---------------E-EEEEEEEEECCGGGH
T ss_pred cCCEEEeccccccccceEeeC-CeE-EEEECC---------------c-EEECCEEEECCCccH
Confidence 999998 776654 344 566544 4 799999999999997
No 54
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.39 E-value=3.3e-12 Score=135.71 Aligned_cols=158 Identities=23% Similarity=0.310 Sum_probs=97.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCccc-ccC--c------cChH--------HHHHhhH
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII-SGN--V------FEPR--------ALNELLP 168 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~-~g~--~------i~~~--------~l~~ll~ 168 (592)
+++||+|||||++|+++|+.|++. |++|+||||.+.+|+... +|+ + ..+. .+...+.
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~------G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~ 99 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKR------GRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALA 99 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHH
Confidence 469999999999999999999999 999999999988765431 111 1 0110 0111111
Q ss_pred hhhhcCCCeeeeccCCcEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEE
Q 007716 169 QWKQEEAPIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIG 248 (592)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~ 248 (592)
.+.... .........+.+........++ ......+.+.|.+.+++.||+|+++++|+++..++++ +.
T Consensus 100 ~~~~~~--~~~~~~~~Gi~~~~~~~g~~~~---------~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~--~~ 166 (417)
T 3v76_A 100 RYRPQD--FVALVERHGIGWHEKTLGQLFC---------DHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG--FR 166 (417)
T ss_dssp HSCHHH--HHHHHHHTTCCEEECSTTEEEE---------SSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE--EE
T ss_pred hcCHHH--HHHHHHHcCCCcEEeeCCEEee---------CCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE--EE
Confidence 000000 0000000000000000000000 1245789999999999999999999999999887643 46
Q ss_pred EEeccCcccCCCCcccccccceEEEcCEEEEecCCCCcc-------hHHHHHHcCCC
Q 007716 249 IGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL-------SEKLIKNFKLR 298 (592)
Q Consensus 249 V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~v-------r~~l~~~~~l~ 298 (592)
|.+.+ | +++||.||+|+|++|.- ...+.+.+|..
T Consensus 167 V~~~~---------------g-~i~ad~VIlAtG~~S~p~~gs~g~g~~la~~~G~~ 207 (417)
T 3v76_A 167 VTTSA---------------G-TVDAASLVVASGGKSIPKMGATGLAYRIAEQFGLP 207 (417)
T ss_dssp EEETT---------------E-EEEESEEEECCCCSSCGGGTCCCHHHHHHHHTTCC
T ss_pred EEECC---------------c-EEEeeEEEECCCCccCCCCCCCcHHHHHHHHCCCC
Confidence 77765 4 89999999999999831 23455566766
No 55
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.37 E-value=2.2e-12 Score=126.01 Aligned_cols=126 Identities=24% Similarity=0.271 Sum_probs=87.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
+++||+|||||++|+++|+.|++. |++|+|||+.....+ ..+...+.......++..+.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~------g~~v~lie~~~~~~G-~~~~~~~~~~~~~~~~~~~~-------------- 60 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQK------GVRVGLLTQSLDAVM-MPFLPPKPPFPPGSLLERAY-------------- 60 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT------TCCEEEEESCGGGTT-CCSSCCCSCCCTTCHHHHHC--------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEecCCCcCC-cccCccccccchhhHHhhhc--------------
Confidence 368999999999999999999999 999999999842211 11100000000000111000
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHc-CCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~-Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~ 264 (592)
+ ..+. ++..+.++|.+.+++. |++++ +++|+++..++ +.+++|.+.+
T Consensus 61 ----d------------~~g~---~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~-~~v~~v~~~~----------- 108 (232)
T 2cul_A 61 ----D------------PKDE---RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEG-NRVVGVRTWE----------- 108 (232)
T ss_dssp ----C------------TTCC---CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEET-TEEEEEEETT-----------
T ss_pred ----c------------CCCC---CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC-CEEEEEEECC-----------
Confidence 0 0011 5778999999999997 99998 56999998776 5666788765
Q ss_pred ccccceEEEcCEEEEecCCCCcch
Q 007716 265 NFQRGVELRGRITLLAEGCRGSLS 288 (592)
Q Consensus 265 ~f~~g~~i~a~~vI~A~G~~s~vr 288 (592)
|.+++||.||+|+|.++..+
T Consensus 109 ----g~~i~a~~VV~A~G~~s~~~ 128 (232)
T 2cul_A 109 ----GPPARGEKVVLAVGSFLGAR 128 (232)
T ss_dssp ----SCCEECSEEEECCTTCSSCE
T ss_pred ----CCEEECCEEEECCCCChhhc
Confidence 56899999999999988644
No 56
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.36 E-value=5.7e-12 Score=128.33 Aligned_cols=157 Identities=23% Similarity=0.328 Sum_probs=100.4
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHH-----HHHhhHhhhhcCCCeee
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRA-----LNELLPQWKQEEAPIRV 179 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~-----l~~ll~~~~~~~~~~~~ 179 (592)
..++||+||||||+|+++|+.|++. .+|++|+|+|+...+|+....++.+.... ..+++..+ +.++..
T Consensus 63 ~~~~dv~IiG~G~aGl~aA~~la~~----~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~---Gv~~~~ 135 (326)
T 2gjc_A 63 FAVSDVIIVGAGSSGLSAAYVIAKN----RPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQEL---EIPYED 135 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHH----CTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHT---TCCCEE
T ss_pred cCcCCEEEECccHHHHHHHHHHHhc----CCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhh---Cccccc
Confidence 4578999999999999999999986 35899999999988876444333221110 01111111 111100
Q ss_pred eccCCcEEEeecCCcccCCCCCCCCCcEEE--cHHHHHHHHHHHHHHc-CCEEecCceEEEEEEcC--C-C--cEEEEEe
Q 007716 180 PVSSDKFWFLTKDRAFSLPSPFSNRGNYVI--SLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDA--D-N--KVIGIGT 251 (592)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~l~~~L~~~a~~~-Gv~i~~g~~v~~i~~~~--~-g--~v~~V~~ 251 (592)
.+.+.+ +...+...|.+.+.+. ||+++.++.|+++..++ + + +|.||.+
T Consensus 136 ------------------------~g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv 191 (326)
T 2gjc_A 136 ------------------------EGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVT 191 (326)
T ss_dssp ------------------------CSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEE
T ss_pred ------------------------CCCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEe
Confidence 011221 3567888999999885 99999999999999875 3 5 7889887
Q ss_pred ccCcccCCCCcccccccceEEEc---------------CEEEEecCCCCcchHHHHH
Q 007716 252 NDMGIAKDGSKKENFQRGVELRG---------------RITLLAEGCRGSLSEKLIK 293 (592)
Q Consensus 252 ~d~g~~~~G~~~~~f~~g~~i~a---------------~~vI~A~G~~s~vr~~l~~ 293 (592)
....+..+|...... ++.++.| |+||+|||..+.+...+.+
T Consensus 192 ~~~~v~~~g~~~~~~-d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~~ 247 (326)
T 2gjc_A 192 NWTLVTQAHGTQCCM-DPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAK 247 (326)
T ss_dssp EEHHHHTC---CCCC-CCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHHH
T ss_pred cceeecccccceecc-CceEEEEeeccccccccccccCCEEEECcCCCchHHHHHHh
Confidence 532222333111111 2468999 9999999999988776643
No 57
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.34 E-value=1.2e-11 Score=130.82 Aligned_cols=146 Identities=21% Similarity=0.314 Sum_probs=95.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCccc-cc--Cc------cChH--------HHHHhhH-
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII-SG--NV------FEPR--------ALNELLP- 168 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~-~g--~~------i~~~--------~l~~ll~- 168 (592)
++||+|||||++|+++|+.|++. |.+|+||||.+.+|.... +| .| ..+. .+...+.
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~------G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~ 77 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKL------GKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALAR 77 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhC------CCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHh
Confidence 58999999999999999999999 999999999987764321 11 11 0110 0000000
Q ss_pred -------hh-hhcCCCeeeeccCCcEEEeecCCcccCCCCCCCCCcEEE---cHHHHHHHHHHHHHHcCCEEecCceEEE
Q 007716 169 -------QW-KQEEAPIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVI---SLSQLVRWLGGKAEELGVEIYPGFAASE 237 (592)
Q Consensus 169 -------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---~~~~l~~~L~~~a~~~Gv~i~~g~~v~~ 237 (592)
.| ...+.+.. .. ..+.+. ....+.+.|.+.+++.||+|+++++|++
T Consensus 78 ~~~~~~~~~~~~~Gi~~~-----------~~------------~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~ 134 (401)
T 2gqf_A 78 YTNWDFISLVAEQGITYH-----------EK------------ELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQ 134 (401)
T ss_dssp SCHHHHHHHHHHTTCCEE-----------EC------------STTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEE
T ss_pred CCHHHHHHHHHhCCCceE-----------EC------------cCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 00 00011100 00 001111 4578889999999999999999999999
Q ss_pred EEEcC---CCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCcc-------hHHHHHHcCCC
Q 007716 238 ILYDA---DNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL-------SEKLIKNFKLR 298 (592)
Q Consensus 238 i~~~~---~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~v-------r~~l~~~~~l~ 298 (592)
+..++ ++.+ .|.+.+ | +++||.||+|+|++|.- ...+.+.+|..
T Consensus 135 i~~~~~g~~~~~-~v~~~~---------------g-~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~ 188 (401)
T 2gqf_A 135 VERIQNDEKVRF-VLQVNS---------------T-QWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIP 188 (401)
T ss_dssp EEECCSCSSCCE-EEEETT---------------E-EEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCC
T ss_pred EEcccCcCCCeE-EEEECC---------------C-EEECCEEEECCCCccCCCCCCChHHHHHHHHCCCC
Confidence 98762 1333 576654 3 79999999999999842 23455566765
No 58
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.33 E-value=5.8e-12 Score=131.49 Aligned_cols=63 Identities=21% Similarity=0.206 Sum_probs=52.8
Q ss_pred cEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCC
Q 007716 206 NYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (592)
Q Consensus 206 ~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s 285 (592)
...++...+.+.|.+.+++.|++|+++++|+++..++++ + .|++.+ | +++||.||+|+|.++
T Consensus 143 ~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~-~-~v~~~~---------------g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 143 SGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG-V-TIETAD---------------G-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-E-EEEESS---------------C-EEEEEEEEECCGGGG
T ss_pred CcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE-E-EEEECC---------------C-eEEcCEEEEcCCccH
Confidence 456788899999999999999999999999999887644 3 576654 3 599999999999987
Q ss_pred c
Q 007716 286 S 286 (592)
Q Consensus 286 ~ 286 (592)
.
T Consensus 205 ~ 205 (372)
T 2uzz_A 205 K 205 (372)
T ss_dssp G
T ss_pred H
Confidence 4
No 59
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.33 E-value=5.5e-12 Score=139.14 Aligned_cols=150 Identities=16% Similarity=0.238 Sum_probs=94.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC-CCCCccc--ccCccChHHHHHhhHhhhhcCCCeeeecc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA-EVGAHII--SGNVFEPRALNELLPQWKQEEAPIRVPVS 182 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~-~~g~~~~--~g~~i~~~~l~~ll~~~~~~~~~~~~~~~ 182 (592)
.+|||||||||+||++||+.|++. |++|+|||+.. .+|.... +-+.+....+.+.+..+. ..+.....
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~------G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~alg---g~~~~~~d 97 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARM------GQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALG---GLMAKAID 97 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTT---CSHHHHHH
T ss_pred CcCCEEEECChHHHHHHHHHHHhC------CCCEEEEeecccccccccccccccchhhHHHHHHHHHhc---cHHHHHhh
Confidence 369999999999999999999999 99999999974 3442110 111122211211111111 10000000
Q ss_pred CCc--EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHH-cCCEEecCceEEEEEEcCCCcEEEEEeccCcccCC
Q 007716 183 SDK--FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKD 259 (592)
Q Consensus 183 ~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~-~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~ 259 (592)
... +..+..... +......+.+++..+.+.|.+.+++ .|++|+ +..|+++..++ +.|++|.+.+
T Consensus 98 ~~gi~f~~l~~~kg-----pav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~-g~V~GV~t~d------ 164 (651)
T 3ces_A 98 QAGIQFRILNASKG-----PAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVEN-DRVVGAVTQM------ 164 (651)
T ss_dssp HHEEEEEEESTTSC-----GGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESS-SBEEEEEETT------
T ss_pred hcccchhhhhcccC-----cccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecC-CEEEEEEECC------
Confidence 011 111111100 0000113467888999999999998 699995 56899998765 6788898865
Q ss_pred CCcccccccceEEEcCEEEEecCCCCc
Q 007716 260 GSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 260 G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.+++||.||+|||.++.
T Consensus 165 ---------G~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 165 ---------GLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp ---------SEEEEEEEEEECCSTTTC
T ss_pred ---------CCEEECCEEEEcCCCCcc
Confidence 578999999999999864
No 60
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.33 E-value=6.1e-12 Score=129.99 Aligned_cols=130 Identities=18% Similarity=0.318 Sum_probs=90.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
++||+|||||++|+++|+.|++. |++|+|||+.+.+|+.+... |... .
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~------g~~v~vie~~~~~gg~~~~~--------------~~~~----~-------- 50 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRS------GLSYVILDAEASPGGAWQHA--------------WHSL----H-------- 50 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHS------SCCEEEECCSSSSSGGGGGS--------------CTTC----B--------
T ss_pred cCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCCCCCCcccCC--------------CCCc----E--------
Confidence 48999999999999999999999 99999999998887643210 1000 0
Q ss_pred EEeecCCcccCCC-CCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 187 WFLTKDRAFSLPS-PFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 187 ~~~~~~~~~~~~~-~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
.........++. ..........++..+.+.|.+.+++.|++++++++|+++..++ +.+.+|++.+
T Consensus 51 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~v~~~~------------ 116 (357)
T 4a9w_A 51 -LFSPAGWSSIPGWPMPASQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFG-ERLRVVARDG------------ 116 (357)
T ss_dssp -CSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEET-TEEEEEETTS------------
T ss_pred -ecCchhhhhCCCCCCCCCccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECC-CcEEEEEeCC------------
Confidence 000000000000 0011112234678999999999999999999999999998876 3332277654
Q ss_pred cccceEEEcCEEEEecCCCCc
Q 007716 266 FQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~ 286 (592)
| ++.+|.||+|+|.++.
T Consensus 117 ---g-~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 117 ---R-QWLARAVISATGTWGE 133 (357)
T ss_dssp ---C-EEEEEEEEECCCSGGG
T ss_pred ---C-EEEeCEEEECCCCCCC
Confidence 4 8999999999998663
No 61
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.31 E-value=6.2e-11 Score=123.43 Aligned_cols=37 Identities=30% Similarity=0.445 Sum_probs=33.8
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
.+++||+|||||++|+++|+.|++. |++|+||||...
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~------G~~V~vle~~~~ 40 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARK------GYSVHILARDLP 40 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC------CCEEEEEeccCC
Confidence 3568999999999999999999998 999999999763
No 62
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.31 E-value=1.1e-11 Score=136.69 Aligned_cols=152 Identities=16% Similarity=0.236 Sum_probs=93.4
Q ss_pred ccccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC-CCCCccc--ccCccChHHHHHhhHhhhhcCCCeeee
Q 007716 104 ESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA-EVGAHII--SGNVFEPRALNELLPQWKQEEAPIRVP 180 (592)
Q Consensus 104 ~~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~-~~g~~~~--~g~~i~~~~l~~ll~~~~~~~~~~~~~ 180 (592)
..++|||||||||+||++||+.|++. |++|+|||+.. .+|.... +-+.+....+.+-+..|. ......
T Consensus 18 ~~~~yDVIVIGgG~AGl~AAlaLAr~------G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~---g~~~~~ 88 (641)
T 3cp8_A 18 GSHMYDVIVVGAGHAGCEAALAVARG------GLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALG---GEMGKA 88 (641)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHT---CSHHHH
T ss_pred ccCcCCEEEECccHHHHHHHHHHHHC------CCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcc---cHHHHH
Confidence 34579999999999999999999999 99999999975 3443111 101111111111111111 000000
Q ss_pred ccCCc--EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHc-CCEEecCceEEEEEEcCCCcEEEEEeccCccc
Q 007716 181 VSSDK--FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVIGIGTNDMGIA 257 (592)
Q Consensus 181 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~-Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~ 257 (592)
..... +..+..... + ......+.+++..+...|.+.+++. |++|+.+ .|+++..++ +.|.+|.+.+
T Consensus 89 ~d~~gi~f~~l~~~kg---p--av~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~~d~-g~V~GV~t~~---- 157 (641)
T 3cp8_A 89 IDATGIQFRMLNRSKG---P--AMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGVSANS-GKFSSVTVRS---- 157 (641)
T ss_dssp HHHHEEEEEEECSSSC---T--TTCEEEEEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEEET-TEEEEEEETT----
T ss_pred HHhcCCchhhcccccC---c--cccchhhhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEEEecC-CEEEEEEECC----
Confidence 00011 111111110 0 0011134688999999999999884 9999754 899988765 6677888765
Q ss_pred CCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 258 KDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 258 ~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++.||.||+|||.++.
T Consensus 158 -----------G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 158 -----------GRAIQAKAAILACGTFLN 175 (641)
T ss_dssp -----------SCEEEEEEEEECCTTCBT
T ss_pred -----------CcEEEeCEEEECcCCCCC
Confidence 578999999999998853
No 63
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.31 E-value=2.6e-10 Score=121.11 Aligned_cols=58 Identities=19% Similarity=0.196 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 212 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 212 ~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
..+.+.|.+.+++.|++|+++++|++|..++ +.+++|++. |.+++||.||.|+|.+..
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~~~gv~~~----------------g~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIEN-GKAAGIIAD----------------DRIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEET----------------TEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEEC-CEEEEEEEC----------------CEEEECCEEEECCCHHHH
Confidence 5688888999999999999999999999876 667778764 478999999999997654
No 64
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.30 E-value=9.7e-12 Score=136.67 Aligned_cols=150 Identities=16% Similarity=0.219 Sum_probs=94.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC-CCCCccc--ccCccChHHHHHhhHhhhhcCCCeeeecc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA-EVGAHII--SGNVFEPRALNELLPQWKQEEAPIRVPVS 182 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~-~~g~~~~--~g~~i~~~~l~~ll~~~~~~~~~~~~~~~ 182 (592)
.+|||||||||+||++||+.|++. |++|+|||+.. .+|.... +-+.+....+.+.+..+ +..+.....
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~------G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldal---gg~~~~~~d 96 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARM------GAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDAL---GGEMGKAID 96 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHT------TCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHH---TCSHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCCEEEEEecccccCCcCccccccccchHHHHHHHHHh---hhHHHHHhh
Confidence 369999999999999999999999 99999999974 3442110 11112221221111111 100000000
Q ss_pred CCcE--EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHH-cCCEEecCceEEEEEEcCCCcEEEEEeccCcccCC
Q 007716 183 SDKF--WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKD 259 (592)
Q Consensus 183 ~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~-~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~ 259 (592)
...+ ..+...... ......+.+++..+.+.|.+.+++ .|++|+ +..|+++..++ +.|++|.+.+
T Consensus 97 ~~gi~f~~l~~~kGp-----av~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~-g~V~GV~t~d------ 163 (637)
T 2zxi_A 97 QTGIQFKMLNTRKGK-----AVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKN-NQVVGVRTNL------ 163 (637)
T ss_dssp HHEEEEEEESTTSCG-----GGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESS-SBEEEEEETT------
T ss_pred hcccceeecccccCc-----cccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecC-CEEEEEEECC------
Confidence 0111 111111100 000113467889999999999998 599995 67899998876 6788898875
Q ss_pred CCcccccccceEEEcCEEEEecCCCCc
Q 007716 260 GSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 260 G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++.||.||+|||.++.
T Consensus 164 ---------G~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 164 ---------GVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp ---------SCEEECSEEEECCTTCBT
T ss_pred ---------CcEEEeCEEEEccCCCcc
Confidence 578999999999998753
No 65
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.30 E-value=2e-11 Score=135.45 Aligned_cols=67 Identities=22% Similarity=0.311 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCcc
Q 007716 211 LSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 211 ~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~v 287 (592)
...+.+.|.+++++.||+|++++.|+++..++++.+.+|.+.+. .+|+. .++.||.||+|+|+.+.+
T Consensus 142 g~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~---~~g~~-------~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 142 GHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCI---ETGEV-------VYFKARATVLATGGAGRI 208 (588)
T ss_dssp HHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEET---TTCCE-------EEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEc---CCCeE-------EEEEcCEEEECCCCCccc
Confidence 36888999999999999999999999999864578888876431 22332 479999999999999863
No 66
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.30 E-value=1.3e-11 Score=136.59 Aligned_cols=172 Identities=20% Similarity=0.224 Sum_probs=102.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcc-cccCccCh------------HHHHHhhHhhhh
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI-ISGNVFEP------------RALNELLPQWKQ 172 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~-~~g~~i~~------------~~l~~ll~~~~~ 172 (592)
..+||+|||||++||++|+.|++. |++|+|+||.+.+|+.. .+++.+.. .....++.++..
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~------g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~ 198 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDA------GAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMK 198 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSS------SCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC------CCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHH
Confidence 468999999999999999999998 99999999998877654 23332210 001111111111
Q ss_pred cCCCeeee--------ccCCcEEEe----------ecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCce
Q 007716 173 EEAPIRVP--------VSSDKFWFL----------TKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFA 234 (592)
Q Consensus 173 ~~~~~~~~--------~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~ 234 (592)
.+...... ...+.+.++ .......++..... .........+...|.+.+++.||+|+++++
T Consensus 199 ~g~~~~~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~-~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~ 277 (572)
T 1d4d_A 199 GGRNINDPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRP-TGGAGVGAHVAQVLWDNAVKRGTDIRLNSR 277 (572)
T ss_dssp HTTTCSCHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEES-TTTCCHHHHHHHHHHHHHHHTTCEEESSEE
T ss_pred hcCCCCCHHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEec-CCCCCCHHHHHHHHHHHHHHcCCeEEecCE
Confidence 00000000 000000000 00000001100000 000123568899999999999999999999
Q ss_pred EEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcC
Q 007716 235 ASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFK 296 (592)
Q Consensus 235 v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~ 296 (592)
|++++.+++++|++|.+.+ .+|+. .+++||.||+|+|+++..+ ++++.+.
T Consensus 278 v~~l~~~~~g~v~GV~~~~----~~G~~-------~~i~A~~VVlAtGg~~~~~-~~~~~~~ 327 (572)
T 1d4d_A 278 VVRILEDASGKVTGVLVKG----EYTGY-------YVIKADAVVIAAGGFAKNN-ERVSKYD 327 (572)
T ss_dssp EEEEEEC--CCEEEEEEEE----TTTEE-------EEEECSEEEECCCCCTTCH-HHHHHHC
T ss_pred EEEEEECCCCeEEEEEEEe----CCCcE-------EEEEcCEEEEeCCCCccCH-HHHHHhC
Confidence 9999876547788888753 23322 4799999999999999865 4555554
No 67
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.30 E-value=2.5e-11 Score=134.90 Aligned_cols=164 Identities=21% Similarity=0.254 Sum_probs=96.7
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcc-cc-cCc---cC---hHHHHHhhHh-------
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI-IS-GNV---FE---PRALNELLPQ------- 169 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~-~~-g~~---i~---~~~l~~ll~~------- 169 (592)
..++||||||||+|||+||+.|++. |++|+||||....++++ .+ |+. +. .......+.+
T Consensus 16 ~~~~DVvVVG~G~AGl~AAl~aa~~------G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~ 89 (621)
T 2h88_A 16 DHEFDAVVVGAGGAGLRAAFGLSEA------GFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDW 89 (621)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTT
T ss_pred cccCCEEEECccHHHHHHHHHHHHC------CCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCC
Confidence 4579999999999999999999998 99999999987655543 22 221 11 1111111111
Q ss_pred --------------------hhhcCCCeeeeccCCcEEEeecCCcccCCCCC--CCCCc-EE--EcHHHHHHHHHHHHHH
Q 007716 170 --------------------WKQEEAPIRVPVSSDKFWFLTKDRAFSLPSPF--SNRGN-YV--ISLSQLVRWLGGKAEE 224 (592)
Q Consensus 170 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~--v~~~~l~~~L~~~a~~ 224 (592)
+...+.++...... .+.. ........+... ..... +. .....+...|.+++.+
T Consensus 90 l~d~~~v~~l~~~s~~~i~~L~~~Gv~f~~~~~g-~~~~-~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~ 167 (621)
T 2h88_A 90 LGDQDAIHYMTEQAPAAVIELENYGMPFSRTEEG-KIYQ-RAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLR 167 (621)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTS-SBCE-ECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCcccCCCC-ceec-cccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHh
Confidence 00111111100000 0000 000000000000 00000 00 1245888999999999
Q ss_pred cCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCcc
Q 007716 225 LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 225 ~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~v 287 (592)
.||+|++++.|++++.++ +.+.||.+.+. .+|+. ..+.||.||+|+|+.+.+
T Consensus 168 ~gv~i~~~~~v~~Li~~~-g~v~Gv~~~~~---~~G~~-------~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 168 YDTSYFVEYFALDLLMEN-GECRGVIALCI---EDGTI-------HRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp SCCEEEETEEEEEEEEET-TEEEEEEEEET---TTCCE-------EEEEEEEEEECCCCCGGG
T ss_pred CCCEEEEceEEEEEEEEC-CEEEEEEEEEc---CCCcE-------EEEEcCeEEECCCccccc
Confidence 999999999999998865 78888877531 23332 479999999999999864
No 68
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.29 E-value=7.8e-11 Score=126.76 Aligned_cols=47 Identities=38% Similarity=0.581 Sum_probs=37.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~ 152 (592)
+.+||+|||||++||+||+.|++...+..|+++|+|||+.+.+|+.+
T Consensus 4 ~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~ 50 (470)
T 3i6d_A 4 GKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKI 50 (470)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceE
Confidence 45899999999999999999999810001129999999998888764
No 69
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.28 E-value=3.1e-10 Score=120.60 Aligned_cols=56 Identities=20% Similarity=0.128 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 212 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 212 ~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
..+.+.|.+.+++.|++|+++++|++|..++ +.+ |.+ + |.+++||.||.|+|.+..
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~v--V~~-~---------------g~~~~ad~Vv~a~~~~~~ 244 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINIEE-KKV--YTR-D---------------NEEYSFDVAISNVGVRET 244 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEETTT-TEE--EET-T---------------CCEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEEC-CEE--EEe-C---------------CcEEEeCEEEECCCHHHH
Confidence 5678888888999999999999999998765 444 543 2 468999999999997743
No 70
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.26 E-value=1.5e-10 Score=123.28 Aligned_cols=40 Identities=35% Similarity=0.590 Sum_probs=37.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCccc
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII 153 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~ 153 (592)
+||||||||++||+||+.|++. |++|+|||+++.+|+.+.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~------G~~V~vlE~~~~~GG~~~ 41 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA------GKKVLLLEGGERLGGRAY 41 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT------TCCEEEECSSSSSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHc------CCeEEEEecCCCccCeec
Confidence 7999999999999999999999 999999999888888764
No 71
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.26 E-value=2.7e-10 Score=125.91 Aligned_cols=67 Identities=19% Similarity=0.266 Sum_probs=54.2
Q ss_pred EEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCC
Q 007716 208 VISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (592)
Q Consensus 208 ~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s 285 (592)
.++...+...|.+.+++.|++|+++++|+++..++ +.+++|++.|. .+|+ +.+++||.||+|+|.++
T Consensus 184 ~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~-~~v~gV~~~d~---~tg~-------~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 184 RNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEG-DQIVGVKARDL---LTDE-------VIEIKAKLVINTSGPWV 250 (571)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET-TEEEEEEEEET---TTCC-------EEEEEBSCEEECCGGGH
T ss_pred eEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeC-CEEEEEEEEEc---CCCC-------EEEEEcCEEEECCChhH
Confidence 46778899999999999999999999999999876 57778886531 1222 24799999999999986
No 72
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.26 E-value=4.2e-11 Score=131.42 Aligned_cols=135 Identities=21% Similarity=0.293 Sum_probs=94.7
Q ss_pred ccccEEEECCCHHHHHHHHHHH-HhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCe-eeeccC
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLK-QLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPI-RVPVSS 183 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La-~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~-~~~~~~ 183 (592)
+++||||||||++|+++|+.|+ +. |++|+|||+.+.+|+.+. ....|- ...+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~------G~~v~viE~~~~~GGtw~------------------~~~ypg~~~d~~s 62 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHEL------GLTTVGFDKADGPGGTWY------------------WNRYPGALSDTES 62 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT------CCCEEEEESSSSSCTHHH------------------HCCCTTCEEEEEG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcC------CCCEEEEECCCCCCCccc------------------ccCCCCceecCCc
Confidence 4689999999999999999999 77 999999999988886432 111110 000000
Q ss_pred CcEEEeecCCcccCCC---CCCCCCcEEEcHHHHHHHHHHHHHHcCC--EEecCceEEEEEEcCCCcEEEEEeccCcccC
Q 007716 184 DKFWFLTKDRAFSLPS---PFSNRGNYVISLSQLVRWLGGKAEELGV--EIYPGFAASEILYDADNKVIGIGTNDMGIAK 258 (592)
Q Consensus 184 ~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~l~~~L~~~a~~~Gv--~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~ 258 (592)
..+. +.+.. ..........++.++.+.|.+.+++.|+ +|+++++|+++..++++..+.|++.+
T Consensus 63 ~~~~-------~~~~~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~----- 130 (540)
T 3gwf_A 63 HLYR-------FSFDRDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDH----- 130 (540)
T ss_dssp GGSS-------CCSCHHHHHHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETT-----
T ss_pred ceee-------eccccccccCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcC-----
Confidence 0000 00000 0001112356788999999999999998 89999999999988765566788765
Q ss_pred CCCcccccccceEEEcCEEEEecCCCCc
Q 007716 259 DGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 259 ~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.+++||.||+|+|..|.
T Consensus 131 ----------G~~i~ad~lV~AtG~~s~ 148 (540)
T 3gwf_A 131 ----------GEVYRAKYVVNAVGLLSA 148 (540)
T ss_dssp ----------SCEEEEEEEEECCCSCCS
T ss_pred ----------CCEEEeCEEEECCccccc
Confidence 578999999999998654
No 73
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.25 E-value=2.3e-11 Score=140.63 Aligned_cols=167 Identities=17% Similarity=0.187 Sum_probs=102.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCCCC--C-CcccccCccCh----HHHHHh----hHhhhhc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAEV--G-AHIISGNVFEP----RALNEL----LPQWKQE 173 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~~~--g-~~~~~g~~i~~----~~l~~l----l~~~~~~ 173 (592)
+++||||||||++|+++|+.|++. |. +|+||||.... + +...+++.+.+ ..+.++ ...|...
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~------G~~~V~vlE~~~~~~~~gss~~~~G~~~~~~~~~~~~~l~~~s~~~~~~l 76 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTR------GWNNITVLDQGPLNMPGGSTSHAPGLVFQTNPSKTMASFAKYTVEKLLSL 76 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT------TCCCEEEECSSCTTCCCSGGGTCCCEECCCCSCHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC------CCCcEEEEeCCCCCCCcccceeCCceeecCCCCHHHHHHHHHHHHHHHHH
Confidence 368999999999999999999999 98 99999998753 2 22233333311 111111 1122221
Q ss_pred CCCeeeeccCCc---------------------------EEEeecCCcc-cCCCC--------CCCCCcEEEcHHHHHHH
Q 007716 174 EAPIRVPVSSDK---------------------------FWFLTKDRAF-SLPSP--------FSNRGNYVISLSQLVRW 217 (592)
Q Consensus 174 ~~~~~~~~~~~~---------------------------~~~~~~~~~~-~~~~~--------~~~~~~~~v~~~~l~~~ 217 (592)
.......+.... +.+++..... ..|.. ........++...+...
T Consensus 77 ~~~~~~~~~~~G~l~~~~~~~~~~~l~~~~~~~~~~G~~~~~l~~~e~~~~~p~l~~~~~~gg~~~~~~g~v~p~~l~~~ 156 (830)
T 1pj5_A 77 TEDGVSCFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQL 156 (830)
T ss_dssp EETTEESEECCCEEEEESSHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHCTTSCGGGCCEEEEETTCEEECHHHHHHH
T ss_pred HhhCCCCeeecCcEEEEeCHHHHHHHHHHHHHHHHcCCCeEEECHHHHHHhCccCCccceEEEEEECCCceEcHHHHHHH
Confidence 100000000000 1111110000 01110 11123456788999999
Q ss_pred HHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCC
Q 007716 218 LGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKL 297 (592)
Q Consensus 218 L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l 297 (592)
|.+.+++.|++|+++++|+++..++ +.+++|.+.+ | +++||.||+|+|.++. .+.+.+++
T Consensus 157 L~~~a~~~Gv~i~~~t~V~~i~~~~-~~v~~V~t~~---------------G-~i~Ad~VV~AaG~~s~---~l~~~~g~ 216 (830)
T 1pj5_A 157 LIKRTESAGVTYRGSTTVTGIEQSG-GRVTGVQTAD---------------G-VIPADIVVSCAGFWGA---KIGAMIGM 216 (830)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETT---------------E-EEECSEEEECCGGGHH---HHHHTTTC
T ss_pred HHHHHHHcCCEEECCceEEEEEEeC-CEEEEEEECC---------------c-EEECCEEEECCccchH---HHHHHhCC
Confidence 9999999999999999999998876 5676788765 4 7999999999999863 45444555
Q ss_pred C
Q 007716 298 R 298 (592)
Q Consensus 298 ~ 298 (592)
+
T Consensus 217 ~ 217 (830)
T 1pj5_A 217 A 217 (830)
T ss_dssp C
T ss_pred C
Confidence 4
No 74
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.25 E-value=6.2e-11 Score=110.57 Aligned_cols=114 Identities=27% Similarity=0.360 Sum_probs=84.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcEE
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~~ 187 (592)
+||+|||||++|+.+|..|++. |.+|+|+|+.+..-... . + .
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~------g~~v~lie~~~~~~~~~---~-------------~-~--------------- 43 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA------GLKVLVLDGGRSKVKGV---S-------------R-V--------------- 43 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSCCTTTTC---S-------------C-C---------------
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCcEEEEeCCCCcccCc---h-------------h-h---------------
Confidence 7899999999999999999999 99999999876221100 0 0 0
Q ss_pred EeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccc
Q 007716 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (592)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~ 267 (592)
... ..++. .+....+.+.+.+.+++.|++++++ +|+++..++++ +.|++.+
T Consensus 44 --~~~--~~~~~--------~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~--~~v~~~~-------------- 94 (180)
T 2ywl_A 44 --PNY--PGLLD--------EPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGV--FEVETEE-------------- 94 (180)
T ss_dssp --CCS--TTCTT--------CCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSS--EEEECSS--------------
T ss_pred --hcc--CCCcC--------CCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCE--EEEEECC--------------
Confidence 000 00000 1345688999999999999999999 99999877644 3566654
Q ss_pred cceEEEcCEEEEecCCCCcchHH
Q 007716 268 RGVELRGRITLLAEGCRGSLSEK 290 (592)
Q Consensus 268 ~g~~i~a~~vI~A~G~~s~vr~~ 290 (592)
| ++.+|.||+|+|.++.+.+.
T Consensus 95 -g-~i~ad~vI~A~G~~~~~~~~ 115 (180)
T 2ywl_A 95 -G-VEKAERLLLCTHKDPTLPSL 115 (180)
T ss_dssp -C-EEEEEEEEECCTTCCHHHHH
T ss_pred -C-EEEECEEEECCCCCCCcccc
Confidence 5 89999999999999865443
No 75
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.25 E-value=8.9e-12 Score=126.79 Aligned_cols=119 Identities=23% Similarity=0.307 Sum_probs=81.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.|||+||||||||++||+.|+++ |++|+|+|+.. .|+.+.+ +++.+..+.+
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~------g~~v~liE~~~-~gg~~~~-G~~~~~~~i~--------------------- 54 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRS------SLKPVMYEGFM-AGGVAAG-GQLTTTTIIE--------------------- 54 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT------TCCCEEECCSS-GGGCCTT-CGGGGSSEEC---------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHC------CCCEEEEecCC-CCCcccC-CCcCChHHhh---------------------
Confidence 59999999999999999999999 99999999875 4444433 4443321100
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
+++.. ...++..++...+.+.+++.++++.... +..+..+.+. . .+.+.+
T Consensus 55 ---------~~~g~-----~~~i~~~~l~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~-~-~~~~~~------------- 104 (314)
T 4a5l_A 55 ---------NFPGF-----PNGIDGNELMMNMRTQSEKYGTTIITET-IDHVDFSTQP-F-KLFTEE------------- 104 (314)
T ss_dssp ---------CSTTC-----TTCEEHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSS-E-EEEETT-------------
T ss_pred ---------hccCC-----cccCCHHHHHHHHHHHHhhcCcEEEEeE-EEEeecCCCc-e-EEEECC-------------
Confidence 01100 0024557888889999999999988664 5554444433 2 244443
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 007716 267 QRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~ 286 (592)
+.++.+|.||+|+|+++.
T Consensus 105 --~~~~~~~~liiATG~~~~ 122 (314)
T 4a5l_A 105 --GKEVLTKSVIIATGATAK 122 (314)
T ss_dssp --CCEEEEEEEEECCCEEEC
T ss_pred --CeEEEEeEEEEccccccc
Confidence 578999999999998653
No 76
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.25 E-value=2.8e-11 Score=125.85 Aligned_cols=120 Identities=23% Similarity=0.318 Sum_probs=88.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
+.+||+|||||++|+++|+.|++. |++|+|||+.+.+|+.+. .+++. . .
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~------g~~v~lie~~~~~gg~~~-----------~~~~~--------~------~ 61 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMN------NISCRIIESMPQLGGQLA-----------ALYPE--------K------H 61 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCHHHH-----------HTCTT--------S------E
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC------CCCEEEEecCCCCCCccc-----------ccCCC--------c------c
Confidence 468999999999999999999998 999999999887775321 00000 0 0
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
.. ..+. ...+.+..+.+.|.+.+++.|++++++++|+.+..++++.+ .|.+.+
T Consensus 62 --~~------~~~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~-~v~~~~------------ 114 (360)
T 3ab1_A 62 --IY------DVAG------FPEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTF-ETRTNT------------ 114 (360)
T ss_dssp --EC------CSTT------CSSEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCE-EEEETT------------
T ss_pred --cc------cCCC------CCCCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceE-EEEECC------------
Confidence 00 0000 00145678899999999999999999999999988764433 566654
Q ss_pred cccceEEEcCEEEEecCCCCc
Q 007716 266 FQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++.+|.||+|+|.++.
T Consensus 115 ---g~~~~~~~li~AtG~~~~ 132 (360)
T 3ab1_A 115 ---GNVYRSRAVLIAAGLGAF 132 (360)
T ss_dssp ---SCEEEEEEEEECCTTCSC
T ss_pred ---CcEEEeeEEEEccCCCcC
Confidence 568999999999999764
No 77
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.24 E-value=5.4e-11 Score=133.11 Aligned_cols=172 Identities=12% Similarity=0.131 Sum_probs=99.1
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccC--cc----ChHHHHHh------------
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGN--VF----EPRALNEL------------ 166 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~--~i----~~~~l~~l------------ 166 (592)
..++||||||||+|||+||+.|++...+.+||++|+||||....+++..+.+ .+ ........
T Consensus 20 ~~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s~s~AqG~~gi~a~l~~ds~e~~~~~~~~~~~gl~ 99 (662)
T 3gyx_A 20 EHSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERSGAVAQGLSAINTYLGDNNADDYVRMVRTDLMGLV 99 (662)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTCSTTTTCEEEECCCCTTSCHHHHHHHHHHHTTTCC
T ss_pred eEEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCCcccccCcchheeecCCCCHHHHHHHHHHhcCCCc
Confidence 3569999999999999999999984111124899999999876555443322 21 11100000
Q ss_pred ---------------hHhhhhcCCCeeeeccCCcEEEeec-CCc---ccCCCC-CCCCC--cEEEcHHHHHHHHHHHHHH
Q 007716 167 ---------------LPQWKQEEAPIRVPVSSDKFWFLTK-DRA---FSLPSP-FSNRG--NYVISLSQLVRWLGGKAEE 224 (592)
Q Consensus 167 ---------------l~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~-~~~~~--~~~v~~~~l~~~L~~~a~~ 224 (592)
+..+...+.++.... .+...+... ... +..... ....+ ...+....+.+.|.+++++
T Consensus 100 d~~~v~~l~~~a~~~i~~L~~~Gv~f~~~~-~~G~~~~g~~~~~fg~~~~~gg~~~~r~~~~~~~~G~~i~~~L~~~a~~ 178 (662)
T 3gyx_A 100 REDLIYDLGRHVDDSVHLFEEWGLPVWIKD-EHGHNLDGAQAKAAGKSLRNGDKPVRSGRWQIMINGESYKVIVAEAAKN 178 (662)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCCBCEEC-SSSCEECHHHHHHHTCCTTTTCCBCCSSTTCEEEEETSHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCceecC-CCCccccchhhhccccccccCccccccceecccCCHHHHHHHHHHHHHh
Confidence 011111122222110 000000000 000 000000 00001 1223445788889999988
Q ss_pred c--CCEEecCceEEEEEEcCC--CcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCcc
Q 007716 225 L--GVEIYPGFAASEILYDAD--NKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 225 ~--Gv~i~~g~~v~~i~~~~~--g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~v 287 (592)
. ||+|+.++.|++++.+++ |+|.||...+ .++|+. ..++||.||+|||+.+.+
T Consensus 179 ~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~---~~~g~~-------~~i~Ak~VVLATGG~g~~ 235 (662)
T 3gyx_A 179 ALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFN---LRANEV-------HIFKANAMVVACGGAVNV 235 (662)
T ss_dssp HHCTTTEECSEEECCCEECSSSTTBEEEEEEEE---SSSSCE-------EEEECSEEEECCCCBCSS
T ss_pred cCCCcEEEEceEEEEEEEeCCccceEEEEEEEE---cCCCcE-------EEEEeCEEEECCCccccc
Confidence 7 999999999999998874 4898987644 123432 579999999999999863
No 78
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.21 E-value=8.8e-11 Score=129.20 Aligned_cols=138 Identities=22% Similarity=0.310 Sum_probs=91.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
.++||+|||||++|+++|+.|++. |++|+||||.+.+|+.+... +.+ ... .........
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~------G~~v~iiE~~~~~GG~w~~~-~~p---------g~~-----~d~~~~~~~ 73 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLREL------GRSVHVIETAGDVGGVWYWN-RYP---------GAR-----CDIESIEYC 73 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCTHHHHC-CCT---------TCB-----CSSCTTTSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhC------CCCEEEEeCCCCCCCccccc-CCC---------cee-----ecccccccc
Confidence 468999999999999999999998 99999999998888743211 000 000 000000000
Q ss_pred EEEeecC-CcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcC--CEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCc
Q 007716 186 FWFLTKD-RAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELG--VEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSK 262 (592)
Q Consensus 186 ~~~~~~~-~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G--v~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~ 262 (592)
+.+.... ....+ ......+.++.++|...+++.+ ++|+++++|+++..++++..+.|++.+
T Consensus 74 ~~f~~~~~~~~~~-------~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~--------- 137 (542)
T 1w4x_A 74 YSFSEEVLQEWNW-------TERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNH--------- 137 (542)
T ss_dssp CCSCHHHHHHCCC-------CBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETT---------
T ss_pred cccChhhhhccCc-------ccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECC---------
Confidence 0000000 00000 0112457888899988888876 679999999999987654456687765
Q ss_pred ccccccceEEEcCEEEEecCCCCc
Q 007716 263 KENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 263 ~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.+++||+||+|+|.+|.
T Consensus 138 ------G~~~~ad~vV~AtG~~s~ 155 (542)
T 1w4x_A 138 ------GDRIRARYLIMASGQLSV 155 (542)
T ss_dssp ------CCEEEEEEEEECCCSCCC
T ss_pred ------CCEEEeCEEEECcCCCCC
Confidence 568999999999998764
No 79
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.21 E-value=4.4e-11 Score=121.49 Aligned_cols=114 Identities=18% Similarity=0.159 Sum_probs=75.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
..|||+|||||||||+||+.|+|. |++|+|||+.. .|+.... .++.
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~------g~~v~lie~~~-~gg~~~~-----------~~~~---------------- 50 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRA------RKQIALFDNNT-NRNRVTQ-----------NSHG---------------- 50 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSC-CGGGGSS-----------CBCC----------------
T ss_pred CCcCEEEECCCHHHHHHHHHHHHC------CCCEEEEeCCC-CCCeeee-----------ecCC----------------
Confidence 469999999999999999999999 99999999874 3331100 0000
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
++.. -.+...++.+.+.+++.+.+...+....++.+...+++.. .|.+.+
T Consensus 51 -----------~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~------------ 100 (304)
T 4fk1_A 51 -----------FITR------DGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLF-EIVTKD------------ 100 (304)
T ss_dssp -----------STTC------TTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCE-EEEETT------------
T ss_pred -----------ccCC------CCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcE-EEEECC------------
Confidence 0000 0123456777777777777644444445666665554443 466654
Q ss_pred cccceEEEcCEEEEecCCCCc
Q 007716 266 FQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++++|.||+|||+++.
T Consensus 101 ---g~~~~a~~liiATGs~p~ 118 (304)
T 4fk1_A 101 ---HTKYLAERVLLATGMQEE 118 (304)
T ss_dssp ---CCEEEEEEEEECCCCEEE
T ss_pred ---CCEEEeCEEEEccCCccc
Confidence 679999999999998754
No 80
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.21 E-value=7.3e-11 Score=129.76 Aligned_cols=137 Identities=24% Similarity=0.302 Sum_probs=93.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCe-eeeccCC
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPI-RVPVSSD 184 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~-~~~~~~~ 184 (592)
+++||||||||++|+++|+.|++. |++|+|||+.+.+|+.+. ....|- ...+...
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~------G~~v~iiE~~~~~GGtw~------------------~~~ypg~~~dv~s~ 75 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQ------GLTVRAFEAASGVGGVWY------------------WNRYPGARCDVESI 75 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCTHHH------------------HCCCTTCBCSSCTT
T ss_pred CCCCEEEECchHHHHHHHHHHHhC------CCCEEEEeCCCCCCCccc------------------cCCCCCceeCCCch
Confidence 468999999999999999999998 999999999988887432 110000 0000000
Q ss_pred cEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCC--EEecCceEEEEEEcCCCcEEEEEeccCcccCCCCc
Q 007716 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGV--EIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSK 262 (592)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv--~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~ 262 (592)
.+.+... ..+ . ..........++.++.+.|.+.+++.|+ +++++++|+++..++++..+.|++.+
T Consensus 76 ~y~~~f~-~~~-~--~~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~--------- 142 (549)
T 4ap3_A 76 DYSYSFS-PEL-E--QEWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDR--------- 142 (549)
T ss_dssp TSSCCSC-HHH-H--HHCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETT---------
T ss_pred hcccccc-ccc-c--cCCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECC---------
Confidence 0000000 000 0 0000011234678999999999999998 79999999999988766566788765
Q ss_pred ccccccceEEEcCEEEEecCCCC
Q 007716 263 KENFQRGVELRGRITLLAEGCRG 285 (592)
Q Consensus 263 ~~~f~~g~~i~a~~vI~A~G~~s 285 (592)
|.+++||+||+|+|..+
T Consensus 143 ------G~~i~ad~lV~AtG~~s 159 (549)
T 4ap3_A 143 ------GDEVSARFLVVAAGPLS 159 (549)
T ss_dssp ------CCEEEEEEEEECCCSEE
T ss_pred ------CCEEEeCEEEECcCCCC
Confidence 67899999999999654
No 81
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.20 E-value=8.3e-11 Score=126.87 Aligned_cols=150 Identities=17% Similarity=0.240 Sum_probs=91.3
Q ss_pred cccEEEECCCHHHHHHHHHHHH---hhhhcCCCCc---EEEEcCCCCCCCccccc---CccChHHHHHhhHhhhhcCCCe
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQ---LCREKNVDLS---VCVVEKGAEVGAHIISG---NVFEPRALNELLPQWKQEEAPI 177 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~---~~~~~~~g~~---V~vlEk~~~~g~~~~~g---~~i~~~~l~~ll~~~~~~~~~~ 177 (592)
.+||+||||||+||++|..|++ . |++ |+|||+.+.+|+.+... ++.+ . +.+.
T Consensus 2 ~~~V~IIGaG~aGl~aA~~L~~~~~~------G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~-~------------g~~~ 62 (464)
T 2xve_A 2 ATRIAILGAGPSGMAQLRAFQSAQEK------GAEIPELVCFEKQADWGGQWNYTWRTGLDE-N------------GEPV 62 (464)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHHHT------TCCCCEEEEECSSSSSCGGGSCCSCCSBCT-T------------SSBC
T ss_pred CCcEEEECccHHHHHHHHHHHhhhhc------CCCCCcEEEEEcCCCCCCEeecCCCCCccc-c------------CCCC
Confidence 4799999999999999999999 7 999 99999998888754321 1110 0 0000
Q ss_pred eeeccCCcEEEeecCCcccC---CCC--CCCCCcEEEcHHHHHHHHHHHHHHcCCE--EecCceEEEEEEcCCCcEEEEE
Q 007716 178 RVPVSSDKFWFLTKDRAFSL---PSP--FSNRGNYVISLSQLVRWLGGKAEELGVE--IYPGFAASEILYDADNKVIGIG 250 (592)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~v~~~~l~~~L~~~a~~~Gv~--i~~g~~v~~i~~~~~g~v~~V~ 250 (592)
.... ...+..........+ +.+ ........+++..+.++|.+.+++.|++ |+++++|+.+..++++..+.|+
T Consensus 63 ~~~~-y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~ 141 (464)
T 2xve_A 63 HSSM-YRYLWSNGPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVT 141 (464)
T ss_dssp CCCC-CTTCBCSSCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEE
T ss_pred cCcc-ccchhhcCChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEE
Confidence 0000 000000000000000 000 0000012356789999999999999998 9999999999887643344566
Q ss_pred eccCcccCCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 251 TNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 251 ~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
+.+. .+|+ ..++.+|.||+|+|.++.
T Consensus 142 ~~~~---~~g~-------~~~~~~d~VVvAtG~~s~ 167 (464)
T 2xve_A 142 VQDH---TTDT-------IYSEEFDYVVCCTGHFST 167 (464)
T ss_dssp EEET---TTTE-------EEEEEESEEEECCCSSSS
T ss_pred EEEc---CCCc-------eEEEEcCEEEECCCCCCC
Confidence 6431 1121 157899999999996554
No 82
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.20 E-value=3.5e-11 Score=123.60 Aligned_cols=119 Identities=24% Similarity=0.344 Sum_probs=87.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
+.+||+|||||++|+++|+.|++. |++|+|||+.+.+|+.+.. .++. ..
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~~~~gg~~~~-----------~~~~--------------~~ 52 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMR------GLSFRFVDPLPEPGGQLTA-----------LYPE--------------KY 52 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSCHHHHH-----------TCTT--------------SE
T ss_pred CcCcEEEECCCHHHHHHHHHHHhC------CCCEEEEeCCCCCCCeeec-----------cCCC--------------ce
Confidence 368999999999999999999998 9999999998877753210 0000 00
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
++ ..+. . ..+.+.++...|.+.+++.+++++++++|+.+..+++ .+.|.+.+
T Consensus 53 ~~--------~~~~-~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~--~~~v~~~~------------ 104 (335)
T 2zbw_A 53 IY--------DVAG-F-----PKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGD--LFKVTTSQ------------ 104 (335)
T ss_dssp EC--------CSTT-C-----SSEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETT--EEEEEETT------------
T ss_pred ee--------ccCC-C-----CCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCC--EEEEEECC------------
Confidence 00 0000 0 0145678888999999888999999999999987763 33566654
Q ss_pred cccceEEEcCEEEEecCCCCc
Q 007716 266 FQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++.+|.||+|+|.++.
T Consensus 105 ---g~~~~~~~lv~AtG~~~~ 122 (335)
T 2zbw_A 105 ---GNAYTAKAVIIAAGVGAF 122 (335)
T ss_dssp ---SCEEEEEEEEECCTTSEE
T ss_pred ---CCEEEeCEEEECCCCCCC
Confidence 568999999999999753
No 83
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.19 E-value=8.4e-11 Score=120.23 Aligned_cols=118 Identities=21% Similarity=0.309 Sum_probs=87.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
+.+||+|||||+||+++|+.|++. |++|+|||+.+.+|+... ..+|...
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~~~~gG~~~-----------~~~~~~~-------------- 54 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMR------QASVKIIESLPQLGGQLS-----------ALYPEKY-------------- 54 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCHHHH-----------HHCTTSE--------------
T ss_pred ccceEEEECCCHHHHHHHHHHHHC------CCCEEEEEcCCCCCceeh-----------hcCCCce--------------
Confidence 358999999999999999999998 999999999988776321 0111000
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
+ ..++.. -.+.+.++...|.+.+++.|++++++++|+++..++++. +.|.+.+
T Consensus 55 ~--------~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~~v~~~~------------ 107 (332)
T 3lzw_A 55 I--------YDVAGF------PKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGV-FKLVTNE------------ 107 (332)
T ss_dssp E--------CCSTTC------SSEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSC-EEEEESS------------
T ss_pred E--------eccCCC------CCCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCc-EEEEECC------------
Confidence 0 001100 014567899999999999999999999999998876433 3577765
Q ss_pred cccceEEEcCEEEEecCCCC
Q 007716 266 FQRGVELRGRITLLAEGCRG 285 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s 285 (592)
| ++.+|.||+|+|.++
T Consensus 108 ---g-~~~~d~vVlAtG~~~ 123 (332)
T 3lzw_A 108 ---E-THYSKTVIITAGNGA 123 (332)
T ss_dssp ---E-EEEEEEEEECCTTSC
T ss_pred ---C-EEEeCEEEECCCCCc
Confidence 3 499999999999954
No 84
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.19 E-value=6.9e-11 Score=120.31 Aligned_cols=113 Identities=25% Similarity=0.352 Sum_probs=79.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
++|||+||||||||++||+.|++. |++|+|+||. .+|+.+...+++..
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~------g~~V~liE~~-~~gG~~~~~~~i~~------------------------- 52 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRA------NLKTVMIERG-IPGGQMANTEEVEN------------------------- 52 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-CTTGGGGGCSCBCC-------------------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC------CCCEEEEecC-CCCCeeecccccCC-------------------------
Confidence 689999999999999999999999 9999999986 46776554444320
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
+|.. -.+...++.........+.++.+..+..+....... .. .+.. +
T Consensus 53 -----------~p~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~-~------------ 99 (312)
T 4gcm_A 53 -----------FPGF------EMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGE-YK--VINF-G------------ 99 (312)
T ss_dssp -----------STTC------SSBCHHHHHHHHHHHHHHTTCEEEECCCCEEEECSS-CE--EEEC-S------------
T ss_pred -----------cCCc------cccchHHHHHHHHHHHhhccccccceeeeeeeeeec-ce--eecc-C------------
Confidence 0000 012335677777777777888888777665544333 21 2322 2
Q ss_pred cccceEEEcCEEEEecCCCCc
Q 007716 266 FQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~ 286 (592)
+.++++|.+|+|+|+++.
T Consensus 100 ---~~~~~~d~liiAtGs~~~ 117 (312)
T 4gcm_A 100 ---NKELTAKAVIIATGAEYK 117 (312)
T ss_dssp ---SCEEEEEEEEECCCEEEC
T ss_pred ---CeEEEeceeEEcccCccC
Confidence 478999999999997653
No 85
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.19 E-value=1.1e-10 Score=118.82 Aligned_cols=114 Identities=20% Similarity=0.291 Sum_probs=84.3
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCC
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~ 184 (592)
.|.+||+|||||++|+++|+.|++. |++|+|||+. +|+.......+
T Consensus 13 ~~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~--~gg~~~~~~~~-------------------------- 58 (323)
T 3f8d_A 13 GEKFDVIIVGLGPAAYGAALYSARY------MLKTLVIGET--PGGQLTEAGIV-------------------------- 58 (323)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESS--TTGGGGGCCEE--------------------------
T ss_pred CCccCEEEECccHHHHHHHHHHHHC------CCcEEEEecc--CCCeecccccc--------------------------
Confidence 3579999999999999999999999 9999999998 56532210000
Q ss_pred cEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccc
Q 007716 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (592)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~ 264 (592)
..++... .+....+.+.+.+.+++.|++++. ..|+++..+++. +.|.+.+
T Consensus 59 ----------~~~~~~~------~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~--~~v~~~~----------- 108 (323)
T 3f8d_A 59 ----------DDYLGLI------EIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDE--FVVKTKR----------- 108 (323)
T ss_dssp ----------CCSTTST------TEEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--C--EEEEESS-----------
T ss_pred ----------cccCCCC------CCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCE--EEEEECC-----------
Confidence 0011000 145678999999999999999999 899999877533 3466654
Q ss_pred ccccceEEEcCEEEEecCCCCc
Q 007716 265 NFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 265 ~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++.+|.||+|+|.++.
T Consensus 109 ----g~~~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 109 ----KGEFKADSVILGIGVKRR 126 (323)
T ss_dssp ----SCEEEEEEEEECCCCEEC
T ss_pred ----CCEEEcCEEEECcCCCCc
Confidence 578999999999998754
No 86
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.18 E-value=2e-10 Score=118.97 Aligned_cols=149 Identities=15% Similarity=0.185 Sum_probs=83.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCC-cccccCccCh-------HHH----HHhhHhhhhcCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGA-HIISGNVFEP-------RAL----NELLPQWKQEEA 175 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~-~~~~g~~i~~-------~~l----~~ll~~~~~~~~ 175 (592)
+||+|||||++|+++|+.|++......|+.+|+|||+....++ ...+++.+.+ ..+ .+.+..|.....
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~aS~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPYLSDPNNPQEADWSQQTFDYLLSHVH 80 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGSGGGTCCCBCCCCSSCCSCTHHHHHHHHHHHHHHTTTT
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCCccccCcceeecccCCCchHHHHHHHHHHHHHHHHHhh
Confidence 3899999999999999999998000001299999999864322 2234554432 011 122233332111
Q ss_pred -------Ceeee------ccCC----------cEEEeecCCcccCCCC---CCCCCcEEEcHHHHHHHHHHHHHHcCCEE
Q 007716 176 -------PIRVP------VSSD----------KFWFLTKDRAFSLPSP---FSNRGNYVISLSQLVRWLGGKAEELGVEI 229 (592)
Q Consensus 176 -------~~~~~------~~~~----------~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i 229 (592)
.+... ...+ .+.+++...--..|.. ... ..+.++...+.+.|.+.+++.|++|
T Consensus 81 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~p~~~~~~~~-~~~~v~p~~~~~~l~~~~~~~Gv~i 159 (351)
T 3g3e_A 81 SPNAENLGLFLISGYNLFHEAIPDPSWKDTVLGFRKLTPRELDMFPDYGYGWFH-TSLILEGKNYLQWLTERLTERGVKF 159 (351)
T ss_dssp STTHHHHTEEEEEEEEEESSCCCCCGGGGTSEEEEECCHHHHTTCTTCCEEEEE-EEEEECHHHHHHHHHHHHHHTTCEE
T ss_pred ccCCCCccEEEEEEEEEecCCccccCHHHhCCCceECCHHHhccCCCCceEEEe-cceEEcHHHHHHHHHHHHHHCCCEE
Confidence 01000 0000 0111110000001100 000 1356889999999999999999999
Q ss_pred ecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 230 YPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 230 ~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
+. ++|+++..+ ..++||.||+|+|.++.
T Consensus 160 ~~-~~V~~i~~~----------------------------~~~~a~~VV~A~G~~s~ 187 (351)
T 3g3e_A 160 FQ-RKVESFEEV----------------------------AREGADVIVNCTGVWAG 187 (351)
T ss_dssp EE-CCCCCHHHH----------------------------HHTTCSEEEECCGGGGG
T ss_pred EE-EEeCCHHHh----------------------------hcCCCCEEEECCCcChH
Confidence 88 777544211 12569999999999874
No 87
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.18 E-value=1.2e-10 Score=129.46 Aligned_cols=67 Identities=19% Similarity=0.299 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHcC-CEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCcch
Q 007716 211 LSQLVRWLGGKAEELG-VEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLS 288 (592)
Q Consensus 211 ~~~l~~~L~~~a~~~G-v~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr 288 (592)
...+...|.+++++.| |+|++++.|+++..++ +.|.+|.+.+. .+|+. ..+.||.||+|||+++.++
T Consensus 133 g~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~-g~v~Gv~~~~~---~~G~~-------~~i~A~~VVlAtGg~s~~~ 200 (602)
T 1kf6_A 133 GFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDD-GHVRGLVAMNM---MEGTL-------VQIRANAVVMATGGAGRVY 200 (602)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEETEEEEEEEEET-TEEEEEEEEET---TTTEE-------EEEECSCEEECCCCCGGGS
T ss_pred HHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC-CEEEEEEEEEc---CCCcE-------EEEEcCeEEECCCCCcccc
Confidence 4588899999999888 9999999999999875 67778765320 12321 3799999999999999864
No 88
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.18 E-value=1.1e-10 Score=119.96 Aligned_cols=53 Identities=36% Similarity=0.506 Sum_probs=45.1
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChH
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPR 161 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~ 161 (592)
..++||+|||||||||+||+.|++. ..|++|+||||...+|+.+..++++.++
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~----r~G~~V~viEk~~~~GG~~~~~~~~~~~ 115 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKN----RPDLKVCIIESSVAPGGGSWLGGQLFSA 115 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHH----CTTSCEEEECSSSSCCTTTTCCSTTCCC
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHh----CCCCeEEEEECCCCCCceEEeCCccCCH
Confidence 4579999999999999999999752 1299999999999999988888776654
No 89
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.18 E-value=1.9e-10 Score=124.28 Aligned_cols=146 Identities=22% Similarity=0.224 Sum_probs=88.4
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcc-cccCc----cCh-----HHHHHh------------
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI-ISGNV----FEP-----RALNEL------------ 166 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~-~~g~~----i~~-----~~l~~l------------ 166 (592)
||||||||+||+++|+.|++. |++|+||||. ..+++. .+.+. +.+ ..+.+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~------G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~ 73 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRA------GKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKT 73 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHT------TCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHH
T ss_pred CEEEECCCHHHHHHHHHHHHC------CCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHH
Confidence 899999999999999999998 9999999998 444432 22221 111 011110
Q ss_pred -----------hHhhhhcCCCeeeeccCCcEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceE
Q 007716 167 -----------LPQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAA 235 (592)
Q Consensus 167 -----------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v 235 (592)
+..+...+.++.. + +........+..... + -.....+.+.|.+++++.||+|+.++.|
T Consensus 74 v~~~~~~~~~~i~~l~~~Gv~~~~----~----~~~~~g~~~~r~~~~-~--d~~g~~l~~~L~~~~~~~gv~i~~~~~v 142 (472)
T 2e5v_A 74 VNYVTSEAKNVIETFESWGFEFEE----D----LRLEGGHTKRRVLHR-T--DETGREIFNFLLKLAREEGIPIIEDRLV 142 (472)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCS----S----CBCCTTCSSCCEECS-S--SCHHHHHHHHHHHHHHHTTCCEECCCEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCc----c----cccccCcCcCcEEEe-C--CCCHHHHHHHHHHHHHhCCCEEEECcEE
Confidence 0001111111110 0 000000001100000 0 0234688899999998889999999999
Q ss_pred EEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCcch
Q 007716 236 SEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLS 288 (592)
Q Consensus 236 ~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr 288 (592)
++..++ +.+.+|.+.+ ++.++.||.||+|+|+++.+.
T Consensus 143 -~l~~~~-~~v~Gv~v~~--------------~~g~~~a~~VVlAtGg~~~~~ 179 (472)
T 2e5v_A 143 -EIRVKD-GKVTGFVTEK--------------RGLVEDVDKLVLATGGYSYLY 179 (472)
T ss_dssp -EEEEET-TEEEEEEETT--------------TEEECCCSEEEECCCCCGGGS
T ss_pred -EEEEeC-CEEEEEEEEe--------------CCCeEEeeeEEECCCCCcccC
Confidence 998765 6777777643 023577999999999998753
No 90
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.18 E-value=7.6e-12 Score=136.90 Aligned_cols=148 Identities=18% Similarity=0.245 Sum_probs=88.1
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC--------CCCCcccccCccChHHHHHh---hHhhhhc
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA--------EVGAHIISGNVFEPRALNEL---LPQWKQE 173 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~--------~~g~~~~~g~~i~~~~l~~l---l~~~~~~ 173 (592)
+.+||||||||||||++||++++++ |.+|+|||+.. .+|+.|++-|||+.+.|... .......
T Consensus 40 ~ydYDviVIG~GpaG~~aA~~aa~~------G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~ 113 (542)
T 4b1b_A 40 TYDYDYVVIGGGPGGMASAKEAAAH------GARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLD 113 (542)
T ss_dssp CSSEEEEEECCSHHHHHHHHHHHTT------TCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHC------CCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhh
Confidence 3479999999999999999999999 99999999743 47999999999999887432 2222111
Q ss_pred CCCeeeeccCCcEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEecc
Q 007716 174 EAPIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTND 253 (592)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d 253 (592)
...+ .+.. ....++++..+...... ...+.......+++.||+++.|... ..+. +.+ .|...+
T Consensus 114 ~~~~-------Gi~~--~~~~~d~~~~~~~~~~~---v~~l~~~~~~~l~~~~V~~i~G~a~---f~~~-~~v-~V~~~~ 176 (542)
T 4b1b_A 114 SKAY-------GWKF--DNLKHDWKKLVTTVQSH---IRSLNFSYMTGLRSSKVKYINGLAK---LKDK-NTV-SYYLKG 176 (542)
T ss_dssp GGGG-------TEEE--EEEEECHHHHHHHHHHH---HHHHHHHHHHHHHHTTCEEECEEEE---EEET-TEE-EEEEC-
T ss_pred hHhc-------Cccc--CcccccHHHHHHHHHHH---HHHHHHHHHHHHHhCCCEEEeeeEE---EcCC-Ccc-eEeecc
Confidence 0000 0000 00111111000000000 0233333445567789999988644 2233 333 344332
Q ss_pred CcccCCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 254 MGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 254 ~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
..+. +.+++||.+|+|||+++.
T Consensus 177 ----~~~~-------~~~i~a~~iiIATGs~P~ 198 (542)
T 4b1b_A 177 ----DLSK-------EETVTGKYILIATGCRPH 198 (542)
T ss_dssp -----CCC-------EEEEEEEEEEECCCEEEC
T ss_pred ----cCCc-------eEEEeeeeEEeccCCCCC
Confidence 1111 478999999999998875
No 91
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.17 E-value=5.7e-11 Score=130.51 Aligned_cols=138 Identities=20% Similarity=0.293 Sum_probs=93.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
+++||||||||++|+++|+.|++. |++|+|||+.+.+|+.+.. .+++. . ...+....
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~------g~~v~iiE~~~~~GGtw~~-~~yPg---------~-------~~d~~~~~ 64 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQA------GMKVLGIEAGEDVGGTWYW-NRYPG---------C-------RLDTESYA 64 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCTHHHH-CCCTT---------C-------BCSSCHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhC------CCCEEEEeCCCCCCCcccc-CCCCc---------e-------eecCchhh
Confidence 468999999999999999999998 9999999999988874321 11100 0 00000000
Q ss_pred EEEe-ecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCC--EEecCceEEEEEEcCCCcEEEEEeccCcccCCCCc
Q 007716 186 FWFL-TKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGV--EIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSK 262 (592)
Q Consensus 186 ~~~~-~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv--~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~ 262 (592)
+.+. .... . ..........++.++...+.+.+++.|+ .|+++++|+++..++++..+.|++.+
T Consensus 65 y~~~f~~~~-~----~~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~--------- 130 (545)
T 3uox_A 65 YGYFALKGI-I----PEWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDN--------- 130 (545)
T ss_dssp HCHHHHTTS-S----TTCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETT---------
T ss_pred cccccCccc-c----cCCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECC---------
Confidence 0000 0000 0 0000112235678999999999999887 79999999999887755566788765
Q ss_pred ccccccceEEEcCEEEEecCCCCc
Q 007716 263 KENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 263 ~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.+++||+||+|+|..+.
T Consensus 131 ------G~~~~ad~lV~AtG~~s~ 148 (545)
T 3uox_A 131 ------EEVVTCRFLISATGPLSA 148 (545)
T ss_dssp ------TEEEEEEEEEECCCSCBC
T ss_pred ------CCEEEeCEEEECcCCCCC
Confidence 678999999999997654
No 92
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.16 E-value=3e-09 Score=116.26 Aligned_cols=41 Identities=39% Similarity=0.553 Sum_probs=38.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~ 152 (592)
+.+||||||||++||+||..|++. |.+|+|+|+++.+|+.+
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~------G~~V~vlE~~~~~GGr~ 43 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDS------GLNVVVLEARDRVGGRT 43 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHT------TCCEEEECSSSSSBTTC
T ss_pred CCceEEEECCCHHHHHHHHHHHHC------CCCEEEEeCCCCCCCce
Confidence 358999999999999999999999 99999999999998865
No 93
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.16 E-value=1.5e-10 Score=129.69 Aligned_cols=163 Identities=18% Similarity=0.212 Sum_probs=93.3
Q ss_pred cccccEEEECCCHHHHHHHHHHH---H-hhhhcCCCCcEEEEcCCCCCCCcccccCc------cC-------hHHHHHhh
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLK---Q-LCREKNVDLSVCVVEKGAEVGAHIISGNV------FE-------PRALNELL 167 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La---~-~~~~~~~g~~V~vlEk~~~~g~~~~~g~~------i~-------~~~l~~ll 167 (592)
..++||||||||+|||+||+.|+ + . |++|+||||....+++..+++. +. .......+
T Consensus 20 ~~~~DVvVIG~G~AGl~AAl~aa~~~~~~------G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~ 93 (643)
T 1jnr_A 20 VVETDILIIGGGFSGCGAAYEAAYWAKLG------GLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYV 93 (643)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHTTT------TCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHH
T ss_pred eccCCEEEECcCHHHHHHHHHHhhhhhhC------CCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHH
Confidence 45799999999999999999999 5 7 9999999998754332222221 21 01111111
Q ss_pred HhhhhcCCCeee----------------eccCCcEEEee-cCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHc-CC-E
Q 007716 168 PQWKQEEAPIRV----------------PVSSDKFWFLT-KDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEEL-GV-E 228 (592)
Q Consensus 168 ~~~~~~~~~~~~----------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~-Gv-~ 228 (592)
.........+.. ......+.+.. ....+ .+ .......+....+.+.|.+.+++. || +
T Consensus 94 ~~~~~~g~~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~-~~---~~~~~~~~~g~~~~~~l~~~~~~~~gv~~ 169 (643)
T 1jnr_A 94 RYVTLDMMGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKY-VR---EGQWQIMIHGESYKPIIAEAAKMAVGEEN 169 (643)
T ss_dssp HHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCB-CB---SSSSCEEEEETTHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCc-cC---CCccccCCCcHHHHHHHHHHHHhcCCCcE
Confidence 111100000000 00000000000 00000 00 000011223345778888888887 99 9
Q ss_pred EecCceEEEEEEcCC--CcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCcc
Q 007716 229 IYPGFAASEILYDAD--NKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 229 i~~g~~v~~i~~~~~--g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~v 287 (592)
|++++.|+++..+++ +.|.||...+. .+|+ ...+.||.||+|+|+.+.+
T Consensus 170 i~~~~~v~~L~~~~~~~g~v~Gv~~~~~---~~g~-------~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 170 IYERVFIFELLKDNNDPNAVAGAVGFSV---REPK-------FYVFKAKAVILATGGATLL 220 (643)
T ss_dssp EECSEEEEEEEECTTCTTBEEEEEEEES---SSSC-------EEEEECSEEEECCCCBCSS
T ss_pred EEecCEEEEEEEcCCccceeEEEEEEEe---cCCc-------EEEEEcCEEEECCCccccc
Confidence 999999999998763 28888875321 2232 1479999999999999863
No 94
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.15 E-value=4.5e-10 Score=121.38 Aligned_cols=41 Identities=27% Similarity=0.509 Sum_probs=37.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~ 152 (592)
..+||+|||||++||+||+.|++. |++|+|+|+...+||.+
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~------g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSR------GTDAVLLESSARLGGAV 55 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTT------TCCEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC------CCCEEEEEcCCCCCcee
Confidence 468999999999999999999998 99999999999998865
No 95
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.15 E-value=3.4e-10 Score=126.69 Aligned_cols=66 Identities=21% Similarity=0.264 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCcc
Q 007716 211 LSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 211 ~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~v 287 (592)
...+...|.+++.+.||+|++++.|++++.++ +.+.+|.+.+. .+|+. ..++||.||+|+|+.+.+
T Consensus 157 G~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~-g~v~Gv~~~~~---~~G~~-------~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 157 GHTMLFAVANECLKLGVSIQDRKEAIALIHQD-GKCYGAVVRDL---VTGDI-------IAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSEEEEEEEEET-TEEEEEEEEET---TTCCE-------EEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEEEEEEecC-CEEEEEEEEEC---CCCcE-------EEEEcCEEEEccCcchhh
Confidence 35788999999999999999999999998865 77888876431 22332 469999999999999864
No 96
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.14 E-value=1.3e-10 Score=127.70 Aligned_cols=66 Identities=14% Similarity=0.168 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHH-cCCEEecCceEEEEEEcCCC------cEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCC
Q 007716 212 SQLVRWLGGKAEE-LGVEIYPGFAASEILYDADN------KVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (592)
Q Consensus 212 ~~l~~~L~~~a~~-~Gv~i~~g~~v~~i~~~~~g------~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~ 284 (592)
..+.+.|.+++++ .||+|++++.|++++.++++ .+.+|.+.+ .++|+. .++.||.||+|+|+.
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~---~~~G~~-------~~i~A~~VVlAtGg~ 207 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWN---RNKETV-------ETCHAKAVVLATGGA 207 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEE---TTTTEE-------EEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEE---cCCCcE-------EEEEcCeEEECCCCc
Confidence 4677888899988 79999999999999984435 788888753 112321 479999999999999
Q ss_pred Ccc
Q 007716 285 GSL 287 (592)
Q Consensus 285 s~v 287 (592)
+.+
T Consensus 208 ~~~ 210 (540)
T 1chu_A 208 SKV 210 (540)
T ss_dssp GGG
T ss_pred ccc
Confidence 875
No 97
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.13 E-value=2e-10 Score=117.47 Aligned_cols=116 Identities=30% Similarity=0.396 Sum_probs=83.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
+.+||+||||||+|+++|+.|++. |++|+|||+. .+|+.+.....+.
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~------g~~v~lie~~-~~gg~~~~~~~~~-------------------------- 53 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRA------QLSTLILEKG-MPGGQIAWSEEVE-------------------------- 53 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-CTTGGGGGCSCBC--------------------------
T ss_pred ccCCEEEECCCHHHHHHHHHHHHc------CCcEEEEeCC-CCCcccccccccc--------------------------
Confidence 468999999999999999999998 9999999998 5665432110000
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEc--CCCcEEEEEeccCcccCCCCcc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYD--ADNKVIGIGTNDMGIAKDGSKK 263 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~--~~g~v~~V~~~d~g~~~~G~~~ 263 (592)
.++. + ...+.+..+.+.+.+.+++.|++++. ..|+++..+ +++ .+.|.+.+
T Consensus 54 ----------~~~~-~----~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~-~~~v~~~~---------- 106 (325)
T 2q7v_A 54 ----------NFPG-F----PEPIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHP-YPFTVRGY---------- 106 (325)
T ss_dssp ----------CSTT-C----SSCBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSS-CCEEEEES----------
T ss_pred ----------cCCC-C----CCCCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCc-eEEEEECC----------
Confidence 0000 0 00135578889999999999999988 578888876 432 12355443
Q ss_pred cccccceEEEcCEEEEecCCCCc
Q 007716 264 ENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 264 ~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++.+|.||+|+|.++.
T Consensus 107 -----g~~~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 107 -----NGEYRAKAVILATGADPR 124 (325)
T ss_dssp -----SCEEEEEEEEECCCEEEC
T ss_pred -----CCEEEeCEEEECcCCCcC
Confidence 568999999999998754
No 98
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.13 E-value=2.6e-10 Score=122.42 Aligned_cols=162 Identities=17% Similarity=0.109 Sum_probs=91.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCC--cEEEEcCCCCCCCcccccCccChH-HHHHhhHhhhhcCCCeee---
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGAEVGAHIISGNVFEPR-ALNELLPQWKQEEAPIRV--- 179 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~--~V~vlEk~~~~g~~~~~g~~i~~~-~l~~ll~~~~~~~~~~~~--- 179 (592)
+.+||+||||||+||++|+.|++. |. +|+|||+.+.+|+.+....+.... .+....+... ..++..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~------G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~--~~~~~~g~~ 76 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAE------KAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILT--TEPIVGPAA 76 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT------TCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCC--CCCBCCSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhc------CCCCCeEEEecCCCCCCeecCCCCCCccccccccccccc--ccccccccc
Confidence 468999999999999999999998 99 999999998887654332211000 0000000000 000000
Q ss_pred -e-ccCCcEEEeecCC---cccCC-CCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEecc
Q 007716 180 -P-VSSDKFWFLTKDR---AFSLP-SPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTND 253 (592)
Q Consensus 180 -~-~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d 253 (592)
. .....+..+..+. ...++ .++........++..+.++|.+.+++.++.|+++++|+++..++ +. +.|++.+
T Consensus 77 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~-~~-~~V~~~~ 154 (447)
T 2gv8_A 77 LPVYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKD-GS-WVVTYKG 154 (447)
T ss_dssp CCBCCCCCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEET-TE-EEEEEEE
T ss_pred cCCccCchhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCC-Ce-EEEEEee
Confidence 0 0000000000000 00010 00111112235688999999999988888899999999998765 32 3466543
Q ss_pred CcccCCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 254 MGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 254 ~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
. .+|+. ..++.+|.||+|+|.+|.
T Consensus 155 ~---~~G~~------~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 155 T---KAGSP------ISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp S---STTCC------EEEEEESEEEECCCSSSS
T ss_pred c---CCCCe------eEEEEeCEEEECCCCCCC
Confidence 1 11210 027999999999999664
No 99
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.12 E-value=1.6e-10 Score=118.39 Aligned_cols=121 Identities=19% Similarity=0.278 Sum_probs=84.5
Q ss_pred ccccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC----CCCCcccccCccChHHHHHhhHhhhhcCCCeee
Q 007716 104 ESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA----EVGAHIISGNVFEPRALNELLPQWKQEEAPIRV 179 (592)
Q Consensus 104 ~~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~----~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~ 179 (592)
..+.+||+|||||++||++|+.|++. |++|+|||+.+ .+|+......
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~vie~~~~~~~~~gg~~~~~~----------------------- 69 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARA------EIKPILYEGMMANGIAAGGQLTTTT----------------------- 69 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHT------TCCCEEECCSSBTTBCTTCGGGGSS-----------------------
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEecCCCCCCCcCcccccch-----------------------
Confidence 34679999999999999999999999 99999999954 3443211000
Q ss_pred eccCCcEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCC
Q 007716 180 PVSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKD 259 (592)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~ 259 (592)
. . ..++.. ...+.+.++...|.+.+++.|++++.++ |+++..++ +.+ .+.+.+ .
T Consensus 70 -----~--~------~~~~~~-----~~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~-~~~-~v~~~~-----~ 123 (338)
T 3itj_A 70 -----E--I------ENFPGF-----PDGLTGSELMDRMREQSTKFGTEIITET-VSKVDLSS-KPF-KLWTEF-----N 123 (338)
T ss_dssp -----E--E------CCSTTC-----TTCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSS-SSE-EEEETT-----C
T ss_pred -----h--h------cccCCC-----cccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcC-CEE-EEEEEe-----c
Confidence 0 0 001100 0124568899999999999999999998 98888765 333 355532 0
Q ss_pred CCcccccccceEEEcCEEEEecCCCCc
Q 007716 260 GSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 260 G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
.++.++.+|.||+|+|.++.
T Consensus 124 -------~~~~~~~~d~vvlAtG~~~~ 143 (338)
T 3itj_A 124 -------EDAEPVTTDAIILATGASAK 143 (338)
T ss_dssp -------SSSCCEEEEEEEECCCEEEC
T ss_pred -------CCCcEEEeCEEEECcCCCcC
Confidence 01467899999999998754
No 100
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.12 E-value=3.2e-10 Score=117.05 Aligned_cols=138 Identities=19% Similarity=0.227 Sum_probs=82.4
Q ss_pred ccEEEECCCHHHHHHHHHHHH---hhhhcCCCCcEEEEcCCCCCCCcccccC-------cc---------ChH---HHHH
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQ---LCREKNVDLSVCVVEKGAEVGAHIISGN-------VF---------EPR---ALNE 165 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~---~~~~~~~g~~V~vlEk~~~~g~~~~~g~-------~i---------~~~---~l~~ 165 (592)
+||+|||||++|+++|+.|++ . |++|+||||...+|+...... .+ .+. .+.+
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~------G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~ 75 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG------PLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQR 75 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C------CEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC------CceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHH
Confidence 589999999999999999999 7 999999999988776432110 00 111 2333
Q ss_pred hhHhhhhcCCCeeeeccCCcEEEeecCCcccCCCCCCCCCcEEEc--HHHHHHHHHHHHHHcCCEEecCceEEEEEEcCC
Q 007716 166 LLPQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVIS--LSQLVRWLGGKAEELGVEIYPGFAASEILYDAD 243 (592)
Q Consensus 166 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~ 243 (592)
++..|...+.... ...... . ... ......|... ...+.+.|.+. .|++|+++++|++|..+++
T Consensus 76 ~~~~~~~~g~~~~--~~~~~~----~---~~~---~~~~~~~~~~~g~~~l~~~l~~~---~g~~i~~~~~V~~i~~~~~ 140 (342)
T 3qj4_A 76 FYDELLAYGVLRP--LSSPIE----G---MVM---KEGDCNFVAPQGISSIIKHYLKE---SGAEVYFRHRVTQINLRDD 140 (342)
T ss_dssp HHHHHHHTTSCEE--CCSCEE----T---CCC-----CCEEEECTTCTTHHHHHHHHH---HTCEEESSCCEEEEEECSS
T ss_pred HHHHHHhCCCeec--Cchhhc----c---eec---cCCccceecCCCHHHHHHHHHHh---cCCEEEeCCEEEEEEEcCC
Confidence 4444433221100 000000 0 000 0000112211 13444555444 4899999999999998775
Q ss_pred CcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCC
Q 007716 244 NKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGC 283 (592)
Q Consensus 244 g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~ 283 (592)
+ + .|++.+ |.++.||.||+|+..
T Consensus 141 ~-~-~v~~~~---------------g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 141 K-W-EVSKQT---------------GSPEQFDLIVLTMPV 163 (342)
T ss_dssp S-E-EEEESS---------------SCCEEESEEEECSCH
T ss_pred E-E-EEEECC---------------CCEEEcCEEEECCCH
Confidence 4 3 477654 456899999999974
No 101
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.12 E-value=3e-10 Score=115.33 Aligned_cols=113 Identities=23% Similarity=0.334 Sum_probs=82.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
+||+||||||+|+++|+.|++. |+ +|+|||+. .+|+.+.....+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~------g~~~v~lie~~-~~gg~~~~~~~~~--------------------------- 47 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG------GVKNAVLFEKG-MPGGQITGSSEIE--------------------------- 47 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT------TCSSEEEECSS-STTCGGGGCSCBC---------------------------
T ss_pred ceEEEECccHHHHHHHHHHHHC------CCCcEEEEcCC-CCCcccccccccc---------------------------
Confidence 7999999999999999999998 99 99999995 4555332110000
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
.++. . ...+++..+.+.|.+.+++.|++++. .+|+++..+++ . +.|.+.+
T Consensus 48 ---------~~~~-~----~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~-~-~~v~~~~------------- 97 (311)
T 2q0l_A 48 ---------NYPG-V----KEVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDS-H-FVILAED------------- 97 (311)
T ss_dssp ---------CSTT-C----CSCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETT-E-EEEEETT-------------
T ss_pred ---------cCCC-C----cccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCC-E-EEEEEcC-------------
Confidence 0000 0 01246678999999999999999998 78999887653 2 3455544
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 007716 267 QRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++.+|.||+|+|.++.
T Consensus 98 --g~~~~~~~vv~AtG~~~~ 115 (311)
T 2q0l_A 98 --GKTFEAKSVIIATGGSPK 115 (311)
T ss_dssp --SCEEEEEEEEECCCEEEC
T ss_pred --CCEEECCEEEECCCCCCC
Confidence 568999999999998765
No 102
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.11 E-value=1.6e-09 Score=118.62 Aligned_cols=71 Identities=24% Similarity=0.310 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcE--EEEEeccCcccCCCCcccccccce-EEEcCEEEEecCCCCcch
Q 007716 212 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKV--IGIGTNDMGIAKDGSKKENFQRGV-ELRGRITLLAEGCRGSLS 288 (592)
Q Consensus 212 ~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v--~~V~~~d~g~~~~G~~~~~f~~g~-~i~a~~vI~A~G~~s~vr 288 (592)
..+.+.|.+.+++.||+++++++|+++..++++.+ +.|++.+ |. ++.||.||+|+|.++...
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~---------------G~~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPN---------------GEMRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETT---------------EEEEEECSCEEECCCCEECCH
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECC---------------CcEEEEcCEEEECcCCccCCc
Confidence 45677888888999999999999999987665654 3466654 55 899999999999998764
Q ss_pred HHHHHHcCCC
Q 007716 289 EKLIKNFKLR 298 (592)
Q Consensus 289 ~~l~~~~~l~ 298 (592)
. +.+..++.
T Consensus 320 ~-~l~~~gl~ 328 (523)
T 1mo9_A 320 E-LAKILGLD 328 (523)
T ss_dssp H-HHHHHTCC
T ss_pred c-CHHHcCCc
Confidence 3 55566665
No 103
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.11 E-value=1.1e-10 Score=121.51 Aligned_cols=136 Identities=24% Similarity=0.272 Sum_probs=85.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
++||+|||||++|+++|+.|++. |. +|+|||+.. +|+.+..- ......+........
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~------g~~~v~lie~~~-~Gg~~~~~---------------~~~~~~~~~~~~~~~ 61 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDF------GITDVIILEKGT-VGHSFKHW---------------PKSTRTITPSFTSNG 61 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCCEEEECSSS-TTHHHHTS---------------CTTCBCSSCCCCCGG
T ss_pred cCcEEEECcCHHHHHHHHHHHHc------CCCcEEEEecCC-CCCccccC---------------cccccccCcchhccc
Confidence 58999999999999999999998 99 999999987 66532110 000000000000000
Q ss_pred EEEeecCCcccCCCCCC----CCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCC
Q 007716 186 FWFLTKDRAFSLPSPFS----NRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGS 261 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~----~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~ 261 (592)
+.+. .+....... ......+.+..+...|.+.+++.|++++++++|+++..++++ + .|.+.+
T Consensus 62 ~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~-------- 127 (369)
T 3d1c_A 62 FGMP----DMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAY-Y-TIATTT-------- 127 (369)
T ss_dssp GTCC----CTTCSSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-E-EEEESS--------
T ss_pred CCch----hhhhccccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe-E-EEEeCC--------
Confidence 0000 000000000 000112456788888999999999999999999999887643 2 466654
Q ss_pred cccccccceEEEcCEEEEecCCCCc
Q 007716 262 KKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 262 ~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
| ++.+|.||+|+|.++.
T Consensus 128 -------g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 128 -------E-TYHADYIFVATGDYNF 144 (369)
T ss_dssp -------C-CEEEEEEEECCCSTTS
T ss_pred -------C-EEEeCEEEECCCCCCc
Confidence 3 5899999999998753
No 104
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.11 E-value=2.1e-10 Score=115.31 Aligned_cols=112 Identities=18% Similarity=0.241 Sum_probs=81.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
|.+||+|||||++|+++|+.|++. |++|+|+|+....+... .+.
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~~~~~~~~----------------~~~-------------- 44 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRA------RKNILLVDAGERRNRFA----------------SHS-------------- 44 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEEECCCCGGGGC----------------SCC--------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC------CCCEEEEeCCCcccccc----------------hhh--------------
Confidence 458999999999999999999999 99999999875322100 000
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHc-CCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~-Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~ 264 (592)
..++. .......++...+.+.+++. +++++.+ +|+++..++++ +.|.+.+
T Consensus 45 ---------~~~~~------~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~--~~v~~~~----------- 95 (297)
T 3fbs_A 45 ---------HGFLG------QDGKAPGEIIAEARRQIERYPTIHWVEG-RVTDAKGSFGE--FIVEIDG----------- 95 (297)
T ss_dssp ---------CSSTT------CTTCCHHHHHHHHHHHHTTCTTEEEEES-CEEEEEEETTE--EEEEETT-----------
T ss_pred ---------cCCcC------CCCCCHHHHHHHHHHHHHhcCCeEEEEe-EEEEEEEcCCe--EEEEECC-----------
Confidence 00000 00134578888999999887 6888765 89999877643 3577665
Q ss_pred ccccceEEEcCEEEEecCCCCc
Q 007716 265 NFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 265 ~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++.+|.||+|+|.++.
T Consensus 96 ----g~~~~~d~vviAtG~~~~ 113 (297)
T 3fbs_A 96 ----GRRETAGRLILAMGVTDE 113 (297)
T ss_dssp ----SCEEEEEEEEECCCCEEE
T ss_pred ----CCEEEcCEEEECCCCCCC
Confidence 578999999999999764
No 105
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.10 E-value=5.9e-11 Score=129.00 Aligned_cols=148 Identities=20% Similarity=0.317 Sum_probs=85.8
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCC
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~ 184 (592)
++++||+||||||||+++|+.|++. |++|+||||.+.+|+.+.+.+|++.+.+......+...... ....
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~------G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~----~~~~ 92 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQL------GMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHG----LEAL 92 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHS----SGGG
T ss_pred cccCCEEEECCCHHHHHHHHHHHHC------CCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhh----Hhhc
Confidence 4579999999999999999999999 99999999988899998888888877664322221110000 0000
Q ss_pred cEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccc
Q 007716 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (592)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~ 264 (592)
.+. .....++++..+..... ....+...+...+++.+++++.+.... .+. +. +.|.+.+ |+
T Consensus 93 g~~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~g~~~~---~~~-~~-~~v~~~~------g~--- 153 (491)
T 3urh_A 93 GVE--VANPKLNLQKMMAHKDA---TVKSNVDGVSFLFKKNKIDGFQGTGKV---LGQ-GK-VSVTNEK------GE--- 153 (491)
T ss_dssp TEE--CCCCEECHHHHHHHHHH---HHHHHHHHHHHHHHHTTCEEEESEEEE---CSS-SE-EEEECTT------SC---
T ss_pred Ccc--cCCCccCHHHHHHHHHH---HHHHHHHHHHHHHHhCCCEEEEEEEEE---ecC-CE-EEEEeCC------Cc---
Confidence 000 00000111000000000 012233344555667899999887542 232 33 3455433 22
Q ss_pred ccccceEEEcCEEEEecCCCC
Q 007716 265 NFQRGVELRGRITLLAEGCRG 285 (592)
Q Consensus 265 ~f~~g~~i~a~~vI~A~G~~s 285 (592)
..++.+|.||+|+|++.
T Consensus 154 ----~~~~~~d~lViATGs~p 170 (491)
T 3urh_A 154 ----EQVLEAKNVVIATGSDV 170 (491)
T ss_dssp ----EEEEECSEEEECCCEEC
T ss_pred ----eEEEEeCEEEEccCCCC
Confidence 16899999999999764
No 106
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.10 E-value=2.5e-09 Score=116.17 Aligned_cols=57 Identities=16% Similarity=0.188 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHcC-CEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCC
Q 007716 212 SQLVRWLGGKAEELG-VEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (592)
Q Consensus 212 ~~l~~~L~~~a~~~G-v~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s 285 (592)
..+.+.|.+.+++.| ++|+++++|++|..++++ + .|++.+ |.+++||.||+|.|...
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~-v-~v~~~~---------------g~~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDA-A-RVTARD---------------GREFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSS-E-EEEETT---------------CCEEEEEEEEECCCGGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCE-E-EEEECC---------------CCEEEcCEEEECCCHHH
Confidence 467778888888888 999999999999887644 4 476654 56899999999999753
No 107
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.09 E-value=2.4e-10 Score=117.23 Aligned_cols=115 Identities=20% Similarity=0.267 Sum_probs=82.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcC----CCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeec
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEK----GAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPV 181 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk----~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~ 181 (592)
+.+||+||||||+|+++|+.|++. |++|+|||+ ....|+......
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~------g~~v~lie~~~~~~~~~gg~~~~~~------------------------- 55 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARA------ELKPLLFEGWMANDIAPGGQLTTTT------------------------- 55 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCCEEECCSSBTTBCTTCGGGGCS-------------------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCeEEEEeccCccccCCCceeeecc-------------------------
Confidence 358999999999999999999998 999999998 333333211000
Q ss_pred cCCcEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCC
Q 007716 182 SSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGS 261 (592)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~ 261 (592)
.. ..++.. ...+.+..+...|.+.+++.|++++.++ |+++..++++ + .|.+ +
T Consensus 56 ---~~--------~~~~~~-----~~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~-~-~v~~-~-------- 107 (333)
T 1vdc_A 56 ---DV--------ENFPGF-----PEGILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKP-F-KLFT-D-------- 107 (333)
T ss_dssp ---EE--------CCSTTC-----TTCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSS-E-EEEC-S--------
T ss_pred ---cc--------ccCCCC-----ccCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCE-E-EEEE-C--------
Confidence 00 000100 0124567899999999999999999987 8888776532 3 4555 3
Q ss_pred cccccccceEEEcCEEEEecCCCCc
Q 007716 262 KKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 262 ~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++++|.||+|+|.++.
T Consensus 108 -------~~~~~~~~vv~A~G~~~~ 125 (333)
T 1vdc_A 108 -------SKAILADAVILAIGAVAK 125 (333)
T ss_dssp -------SEEEEEEEEEECCCEEEC
T ss_pred -------CcEEEcCEEEECCCCCcC
Confidence 478999999999998864
No 108
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.08 E-value=2.5e-10 Score=115.83 Aligned_cols=115 Identities=27% Similarity=0.340 Sum_probs=82.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
+|||+||||||+|+++|+.|++. |++|+|+|+. .|+.+.... .+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~------g~~v~li~~~--~gG~~~~~~----------------------------~~ 44 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARK------GIRTGLMGER--FGGQILDTV----------------------------DI 44 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTT------TCCEEEECSS--TTGGGGGCC----------------------------EE
T ss_pred CCCEEEECcCHHHHHHHHHHHHC------CCcEEEEeCC--CCceecccc----------------------------cc
Confidence 48999999999999999999998 9999999863 454321100 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCC-CcEEEEEeccCcccCCCCcccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDAD-NKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~-g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
. .++. .....+..+.+.+.+.+++.|++++.+++|+.+..+.+ +..+.|.+.+
T Consensus 45 ~--------~~~~------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~------------ 98 (310)
T 1fl2_A 45 E--------NYIS------VPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETAS------------ 98 (310)
T ss_dssp C--------CBTT------BSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETT------------
T ss_pred c--------cccC------cCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECC------------
Confidence 0 0000 00134568888999999999999999999999876532 2234566654
Q ss_pred cccceEEEcCEEEEecCCCCc
Q 007716 266 FQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++.+|.||+|+|.++.
T Consensus 99 ---g~~~~~~~lv~AtG~~~~ 116 (310)
T 1fl2_A 99 ---GAVLKARSIIVATGAKWR 116 (310)
T ss_dssp ---SCEEEEEEEEECCCEEEC
T ss_pred ---CCEEEeCEEEECcCCCcC
Confidence 568999999999998754
No 109
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.08 E-value=3.6e-10 Score=115.34 Aligned_cols=115 Identities=24% Similarity=0.320 Sum_probs=81.8
Q ss_pred ccccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccC
Q 007716 104 ESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSS 183 (592)
Q Consensus 104 ~~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~ 183 (592)
+.+++||+||||||+|+++|+.|++. |++|+|||+. .+|+.+.....+.
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~------g~~v~lie~~-~~gg~~~~~~~~~------------------------ 61 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARS------GFSVAILDKA-VAGGLTAEAPLVE------------------------ 61 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-STTGGGGGCSCBC------------------------
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhC------CCcEEEEeCC-CCCccccccchhh------------------------
Confidence 34569999999999999999999998 9999999994 4555322110000
Q ss_pred CcEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcc
Q 007716 184 DKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKK 263 (592)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~ 263 (592)
.++. + ..+.+..+...+.+.+++.|++++. ..|+++..+++ .+ .|.+.
T Consensus 62 ------------~~~~-~-----~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~-~~-~v~~~----------- 109 (319)
T 3cty_A 62 ------------NYLG-F-----KSIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQG-GF-DIETN----------- 109 (319)
T ss_dssp ------------CBTT-B-----SSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETT-EE-EEEES-----------
T ss_pred ------------hcCC-C-----cccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCC-EE-EEEEC-----------
Confidence 0000 0 0134567888889999999999988 68988887653 22 35553
Q ss_pred cccccceEEEcCEEEEecCCCCc
Q 007716 264 ENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 264 ~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
+.++.+|.||+|+|.++.
T Consensus 110 -----~~~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 110 -----DDTYHAKYVIITTGTTHK 127 (319)
T ss_dssp -----SSEEEEEEEEECCCEEEC
T ss_pred -----CCEEEeCEEEECCCCCcc
Confidence 357999999999998654
No 110
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.08 E-value=1.6e-10 Score=125.06 Aligned_cols=148 Identities=23% Similarity=0.256 Sum_probs=87.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
.++||+||||||+|+++|+.|++. |++|+|||+.+.+|+.+.+.+|++.+.+......|..... ......
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~------G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~----~~~~~g 73 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQL------GFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHT----EAQKRG 73 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH----TSGGGT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHH----HHHhcC
Confidence 368999999999999999999999 9999999998889998888888876655332222211100 000001
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
+... ....+++....... .. -...+...+.+.+++.||+++.++.+. .++ + .+.|.+.+ |..
T Consensus 74 i~~~-~~~~~~~~~~~~~~-~~--~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~-~-~v~V~~~~------G~~--- 135 (478)
T 1v59_A 74 IDVN-GDIKINVANFQKAK-DD--AVKQLTGGIELLFKKNKVTYYKGNGSF---EDE-T-KIRVTPVD------GLE--- 135 (478)
T ss_dssp EEEC-SCEEECHHHHHHHH-HH--HHHHHHHHHHHHHHHTTCEEEESEEEE---SSS-S-EEEEECCT------TCT---
T ss_pred cccC-CCCccCHHHHHHHH-HH--HHHHHHHHHHHHHHhCCCEEEEEEEEE---ccC-C-eEEEEecC------CCc---
Confidence 1000 00000000000000 00 012334445666777899999998764 232 3 33465543 210
Q ss_pred cccceE------EEcCEEEEecCCCC
Q 007716 266 FQRGVE------LRGRITLLAEGCRG 285 (592)
Q Consensus 266 f~~g~~------i~a~~vI~A~G~~s 285 (592)
.+ +++|.||+|+|+++
T Consensus 136 ----~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 136 ----GTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp ----TCCSSCEEEEEEEEEECCCEEE
T ss_pred ----ccccccceEEeCEEEECcCCCC
Confidence 34 99999999999876
No 111
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.06 E-value=3.6e-11 Score=130.43 Aligned_cols=154 Identities=20% Similarity=0.286 Sum_probs=86.9
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCC
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~ 184 (592)
.+++||+|||||++|+++|+.|++. |++|+|||+.+.+|+.+.+.+|++.+.+......+.... .....
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~------G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~-----~~~~~ 72 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADE------GLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVR-----HLAAN 72 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHH-----HGGGG
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHH-----HHHhC
Confidence 3469999999999999999999998 999999999888898888778877655432211111100 00000
Q ss_pred cEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCc---c-cCCC
Q 007716 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMG---I-AKDG 260 (592)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g---~-~~~G 260 (592)
.+.+ ....+++......... ....+...+.+.+++.|++++.++.+. .++ +.+ .|.+.+.. . ..+|
T Consensus 73 gi~~--~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~-~~v-~v~~~~g~~~~~~~~~g 142 (482)
T 1ojt_A 73 GIKY--PEPELDIDMLRAYKDG---VVSRLTGGLAGMAKSRKVDVIQGDGQF---LDP-HHL-EVSLTAGDAYEQAAPTG 142 (482)
T ss_dssp TCCC--CCCCCCHHHHHHHHHH---HHHHHHHHHHHHHHHTTCEEEEEEEEE---EET-TEE-EEEEEEEEETTEEEEEE
T ss_pred Cccc--CCCccCHHHHHHHHHH---HHHHHHHHHHHHHHhCCcEEEeeEEEE---ccC-CEE-EEEecCCcccccccccC
Confidence 0000 0000000000000000 012334445666777899999998653 233 333 45443300 0 0011
Q ss_pred CcccccccceEEEcCEEEEecCCCCc
Q 007716 261 SKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 261 ~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
+ ..++++|.||+|+|+++.
T Consensus 143 ~-------~~~i~ad~lViAtGs~p~ 161 (482)
T 1ojt_A 143 E-------KKIVAFKNCIIAAGSRVT 161 (482)
T ss_dssp E-------EEEEEEEEEEECCCEEEC
T ss_pred c-------ceEEEcCEEEECCCCCCC
Confidence 1 157899999999999865
No 112
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.06 E-value=5.9e-10 Score=114.62 Aligned_cols=115 Identities=23% Similarity=0.306 Sum_probs=81.6
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCC
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~ 184 (592)
.+.+||+||||||+|+++|+.|++. |++|+|||+. .+|+.+.....+
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~-~~gg~~~~~~~~-------------------------- 58 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARA------QLAPLVFEGT-SFGGALMTTTDV-------------------------- 58 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHT------TCCCEEECCS-SCSCGGGSCSCB--------------------------
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC------CCeEEEEecC-CCCCceeccchh--------------------------
Confidence 3569999999999999999999998 9999999975 455432110000
Q ss_pred cEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEE-EeccCcccCCCCcc
Q 007716 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGI-GTNDMGIAKDGSKK 263 (592)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V-~~~d~g~~~~G~~~ 263 (592)
..++.. ...+.+..+...|.+.+++.|++++.++ |+++.. + +.+ .| .+.+
T Consensus 59 ----------~~~~~~-----~~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~-~~~-~v~~~~~---------- 109 (335)
T 2a87_A 59 ----------ENYPGF-----RNGITGPELMDEMREQALRFGADLRMED-VESVSL-H-GPL-KSVVTAD---------- 109 (335)
T ss_dssp ----------CCSTTC-----TTCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-S-SSS-EEEEETT----------
T ss_pred ----------hhcCCC-----CCCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-C-CcE-EEEEeCC----------
Confidence 000100 0124557888899999999999999997 888876 3 222 34 5543
Q ss_pred cccccceEEEcCEEEEecCCCCc
Q 007716 264 ENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 264 ~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++.+|.||+|+|.++.
T Consensus 110 -----g~~~~~d~lviAtG~~~~ 127 (335)
T 2a87_A 110 -----GQTHRARAVILAMGAAAR 127 (335)
T ss_dssp -----SCEEEEEEEEECCCEEEC
T ss_pred -----CCEEEeCEEEECCCCCcc
Confidence 568999999999998764
No 113
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.05 E-value=1.5e-10 Score=124.93 Aligned_cols=133 Identities=19% Similarity=0.304 Sum_probs=85.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHh---hhhcCCCeeeecc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQ---WKQEEAPIRVPVS 182 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~---~~~~~~~~~~~~~ 182 (592)
++|||+||||||+|+++|+.|++. |++|+||||.+.+|+.+...+|++.+.+...... +.....
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~------G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~------- 69 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKA------KYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIAN------- 69 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred ccceEEEECCCHHHHHHHHHHHhC------CCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhccc-------
Confidence 369999999999999999999999 9999999998899999888888877665333211 111000
Q ss_pred CCcEEEeecCCcccCCCCCCCCCcEEEcHHH---HH--HHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCccc
Q 007716 183 SDKFWFLTKDRAFSLPSPFSNRGNYVISLSQ---LV--RWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIA 257 (592)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---l~--~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~ 257 (592)
....++++. +.-.... +. ..+.+.+++.|++++.+ .+..+. . + .+.|.+.+
T Consensus 70 --------~~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id--~-~-~~~V~~~~---- 125 (466)
T 3l8k_A 70 --------VKIPLDFST-------VQDRKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIKD--P-T-HVIVKTDE---- 125 (466)
T ss_dssp --------SCCCCCHHH-------HHHHHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEEE--T-T-EEEEEETT----
T ss_pred --------CCCCcCHHH-------HHHHHHhheeccccchHHHHHHhCCCEEEEe-EEEEec--C-C-eEEEEcCC----
Confidence 000011100 0000111 22 44555556678999888 455543 2 2 23465543
Q ss_pred CCCCcccccccceE--EEcCEEEEecCCCCc
Q 007716 258 KDGSKKENFQRGVE--LRGRITLLAEGCRGS 286 (592)
Q Consensus 258 ~~G~~~~~f~~g~~--i~a~~vI~A~G~~s~ 286 (592)
|.+ +.+|.+|+|+|+.+.
T Consensus 126 -----------g~~~~~~~d~lviAtG~~p~ 145 (466)
T 3l8k_A 126 -----------GKEIEAETRYMIIASGAETA 145 (466)
T ss_dssp -----------SCEEEEEEEEEEECCCEEEC
T ss_pred -----------CcEEEEecCEEEECCCCCcc
Confidence 455 999999999997543
No 114
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.05 E-value=1.3e-10 Score=125.26 Aligned_cols=152 Identities=21% Similarity=0.250 Sum_probs=89.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCC-----CcEEEEcCCCCCCCccc---ccCccChHHHHHhhHhhhhcCCCe
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVD-----LSVCVVEKGAEVGAHII---SGNVFEPRALNELLPQWKQEEAPI 177 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g-----~~V~vlEk~~~~g~~~~---~g~~i~~~~l~~ll~~~~~~~~~~ 177 (592)
..+|||||||||+||++|+.|++. | ++|+|||+.+.+|.+.. .+..+....+.++. ....+
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~------g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~----~~~~p- 97 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQER------AQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLV----SLRNP- 97 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHH------HHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSS----TTTCT-
T ss_pred CcCCEEEECCCHHHHHHHHHHHhc------ccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccc----cccCC-
Confidence 358999999999999999999998 8 99999999998774321 11111100000000 00000
Q ss_pred eeeccCCcE-EEee-cCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCC-CcEE--EEEec
Q 007716 178 RVPVSSDKF-WFLT-KDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDAD-NKVI--GIGTN 252 (592)
Q Consensus 178 ~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~-g~v~--~V~~~ 252 (592)
.....+ .++. ......+ .....+...+..+.++|...+++.+++++++++|+++..+++ +..+ .|++.
T Consensus 98 ---~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~ 170 (463)
T 3s5w_A 98 ---TSPYSFVNYLHKHDRLVDF----INLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISR 170 (463)
T ss_dssp ---TCTTSHHHHHHHTTCHHHH----HHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEE
T ss_pred ---CCCCChhHhhhhcCceeec----ccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEe
Confidence 000000 0000 0000000 000122346788999999999888999999999999987622 3332 45554
Q ss_pred cCcccCCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 253 DMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 253 d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
+ .+|+. .++.+|.||+|+|..+.
T Consensus 171 ~----g~g~~-------~~~~~d~lVlAtG~~p~ 193 (463)
T 3s5w_A 171 N----ADGEE-------LVRTTRALVVSPGGTPR 193 (463)
T ss_dssp E----TTSCE-------EEEEESEEEECCCCEEC
T ss_pred c----CCCce-------EEEEeCEEEECCCCCCC
Confidence 4 11211 38999999999998654
No 115
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.05 E-value=6.1e-10 Score=120.25 Aligned_cols=149 Identities=21% Similarity=0.348 Sum_probs=87.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
.++||+|||||++|+++|+.|++. |++|+|||+.+.+|+.+.+.+|++.+.+......+...... .....
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~------g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~----~~~~g 74 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQL------GFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHS----FANHG 74 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHT----HHHHT
T ss_pred ccCCEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHH----HHhcC
Confidence 368999999999999999999999 99999999998899988877787766543221111100000 00000
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
+.. ....++++..+..... -...+...+.+.+++.|++++.++.+. .+. +. +.|.+.+ |+
T Consensus 75 ~~~--~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~-~~-~~v~~~~------G~---- 134 (470)
T 1dxl_A 75 VKV--SNVEIDLAAMMGQKDK---AVSNLTRGIEGLFKKNKVTYVKGYGKF---VSP-SE-ISVDTIE------GE---- 134 (470)
T ss_dssp EEE--SCEEECHHHHHHHHHH---HHHHHHHHHHHHHHHHTCEEEESCEEE---EET-TE-EEECCSS------SC----
T ss_pred ccc--CCCccCHHHHHHHHHH---HHHHHHHHHHHHHHhCCCEEEEeEEEE---ecC-CE-EEEEeCC------Cc----
Confidence 000 0000000000000000 012344455666777899999998663 233 22 2354433 21
Q ss_pred cccceEEEcCEEEEecCCCCcc
Q 007716 266 FQRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~v 287 (592)
..++++|.||+|+|.++.+
T Consensus 135 ---~~~i~~d~lIiAtGs~p~~ 153 (470)
T 1dxl_A 135 ---NTVVKGKHIIIATGSDVKS 153 (470)
T ss_dssp ---CEEEECSEEEECCCEEECC
T ss_pred ---eEEEEcCEEEECCCCCCCC
Confidence 1689999999999987653
No 116
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.04 E-value=9.3e-11 Score=126.50 Aligned_cols=145 Identities=23% Similarity=0.249 Sum_probs=86.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
++||+||||||||+++|+.|++. |++|+|+|+. .+|+.+.+.++++.+.+......+.... .......+
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~------G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~----~~~~~~g~ 71 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQL------GLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFT----KDAKAFGI 71 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHH----HHTTTTTE
T ss_pred cCCEEEECCCHHHHHHHHHHHhC------CCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHH----HHHHhcCC
Confidence 48999999999999999999999 9999999998 6788777777777655433222111100 00000011
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
. ....++++........ . ...+.+.+.+.+++.||+++.++.+. .++ +. +.|.+.+ |+.
T Consensus 72 ~---~~~~~~~~~~~~~~~~-~--~~~l~~~l~~~~~~~gv~~~~g~~~~---id~-~~-v~V~~~~------G~~---- 130 (464)
T 2a8x_A 72 S---GEVTFDYGIAYDRSRK-V--AEGRVAGVHFLMKKNKITEIHGYGTF---ADA-NT-LLVDLND------GGT---- 130 (464)
T ss_dssp E---ECCEECHHHHHHHHHH-H--HHHHHHHHHHHHHHTTCEEECEEEEE---SSS-SE-EEEEETT------SCC----
T ss_pred C---CCCccCHHHHHHHHHH-H--HHHHHHHHHHHHHhCCCEEEEeEEEE---ecC-Ce-EEEEeCC------Cce----
Confidence 0 0000111000000000 0 13455566777778899999988653 233 33 3465543 210
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 007716 267 QRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~ 286 (592)
.++.+|.||+|||+++.
T Consensus 131 ---~~~~~d~lViAtG~~~~ 147 (464)
T 2a8x_A 131 ---ESVTFDNAIIATGSSTR 147 (464)
T ss_dssp ---EEEEEEEEEECCCEEEC
T ss_pred ---EEEEcCEEEECCCCCCC
Confidence 68999999999998775
No 117
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.03 E-value=1.6e-10 Score=124.35 Aligned_cols=139 Identities=26% Similarity=0.324 Sum_probs=86.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
+++||+|||||+||+++|+.|++. |++|+|||+. .+|+.+.+.+|++.+.+......+..... .....
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~------g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~-----~~~~g 69 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQL------GQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKH-----SEEMG 69 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHT-----CGGGT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC------CCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHH-----HHhcC
Confidence 358999999999999999999999 9999999998 68888877788776655322111111000 00000
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcH-----HHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCC
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISL-----SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDG 260 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~-----~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G 260 (592)
+.+ ....++++ ..+.+ ..+.+.+.+.+++.|++++.++.+. .++ +. +.|.+.+
T Consensus 70 ~~~--~~~~~~~~--------~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---id~-~~-v~V~~~~------- 127 (455)
T 1ebd_A 70 IKA--ENVTIDFA--------KVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYF---VDA-NT-VRVVNGD------- 127 (455)
T ss_dssp EEC--CSCEECHH--------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEE---EET-TE-EEEEETT-------
T ss_pred ccc--CCCccCHH--------HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---ccC-Ce-EEEEeCC-------
Confidence 000 00000000 00011 2344556677777899999998653 233 32 3465544
Q ss_pred Ccccccccc-eEEEcCEEEEecCCCCc
Q 007716 261 SKKENFQRG-VELRGRITLLAEGCRGS 286 (592)
Q Consensus 261 ~~~~~f~~g-~~i~a~~vI~A~G~~s~ 286 (592)
| .++.+|.+|+|+|.++.
T Consensus 128 --------G~~~i~~d~lViATGs~p~ 146 (455)
T 1ebd_A 128 --------SAQTYTFKNAIIATGSRPI 146 (455)
T ss_dssp --------EEEEEECSEEEECCCEEEC
T ss_pred --------CcEEEEeCEEEEecCCCCC
Confidence 4 57999999999998764
No 118
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.02 E-value=6.4e-10 Score=113.26 Aligned_cols=114 Identities=18% Similarity=0.261 Sum_probs=80.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
+.+||+||||||+|+++|+.|++. |++|+|||+. .+|+.+.....+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~-~~gg~~~~~~~~--------------------------- 49 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARA------NLQPVLITGM-EKGGQLTTTTEV--------------------------- 49 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT------TCCCEEECCS-STTGGGGGCSBC---------------------------
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC------CCcEEEEccC-CCCceEecchhh---------------------------
Confidence 358999999999999999999998 9999999975 455432110000
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
..++.. ...+.+..+...+.+.+++.|++++.++ ++.+..+++ .+ .| +.+
T Consensus 50 ---------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~-~~-~v-~~~------------ 99 (320)
T 1trb_A 50 ---------ENWPGD-----PNDLTGPLLMERMHEHATKFETEIIFDH-INKVDLQNR-PF-RL-NGD------------ 99 (320)
T ss_dssp ---------CCSTTC-----CSSCBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSS-SE-EE-EES------------
T ss_pred ---------hhCCCC-----CCCCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecCC-EE-EE-EeC------------
Confidence 000000 0013457888889999999999999986 888876553 33 34 333
Q ss_pred cccceEEEcCEEEEecCCCCc
Q 007716 266 FQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++.+|.||+|+|.++.
T Consensus 100 ---~~~~~~~~lv~AtG~~~~ 117 (320)
T 1trb_A 100 ---NGEYTCDALIIATGASAR 117 (320)
T ss_dssp ---SCEEEEEEEEECCCEEEC
T ss_pred ---CCEEEcCEEEECCCCCcC
Confidence 468999999999998764
No 119
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.00 E-value=1.5e-10 Score=125.79 Aligned_cols=53 Identities=21% Similarity=0.416 Sum_probs=46.8
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcC--------CCCCCCcccccCccChHHH
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEK--------GAEVGAHIISGNVFEPRAL 163 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk--------~~~~g~~~~~g~~i~~~~l 163 (592)
.++|||+||||||||++||+.|++. |++|+|||| ...+|+.|.+.+|++.+.+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~------G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l 64 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQL------GKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLM 64 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC------CCeEEEEEecccccccccCCcCCeecccCCcccHHH
Confidence 3579999999999999999999999 999999998 4568888888888887665
No 120
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.00 E-value=9e-10 Score=120.50 Aligned_cols=117 Identities=26% Similarity=0.408 Sum_probs=84.0
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCC
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~ 184 (592)
...+||+||||||||+++|+.|++. |++|+|+|+. .|+.+.....+.
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~------G~~v~lie~~--~GG~~~~~~~~~------------------------- 256 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARK------GIRTGLMGER--FGGQVLDTVDIE------------------------- 256 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSS--TTGGGTTCSCBC-------------------------
T ss_pred cCcccEEEECCcHHHHHHHHHHHhC------CCeEEEEECC--CCCccccccccc-------------------------
Confidence 3469999999999999999999998 9999999963 454321100000
Q ss_pred cEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCC-CcEEEEEeccCcccCCCCcc
Q 007716 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDAD-NKVIGIGTNDMGIAKDGSKK 263 (592)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~-g~v~~V~~~d~g~~~~G~~~ 263 (592)
. + ...+ ...+..+...|.+.+++.|++++.+++|+.+..+.+ +..+.|.+.+
T Consensus 257 ~--~------~~~~---------~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~---------- 309 (521)
T 1hyu_A 257 N--Y------ISVP---------KTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETAS---------- 309 (521)
T ss_dssp C--B------TTBS---------SBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETT----------
T ss_pred c--c------CCCC---------CCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECC----------
Confidence 0 0 0000 134568888999999999999999999999875422 2234576654
Q ss_pred cccccceEEEcCEEEEecCCCCc
Q 007716 264 ENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 264 ~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++++|.||+|+|+++.
T Consensus 310 -----g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 310 -----GAVLKARSIIIATGAKWR 327 (521)
T ss_dssp -----SCEEEEEEEEECCCEEEC
T ss_pred -----CCEEEcCEEEECCCCCcC
Confidence 568999999999998654
No 121
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.99 E-value=1.9e-10 Score=124.49 Aligned_cols=148 Identities=23% Similarity=0.380 Sum_probs=82.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC------CCCcccccCccChHHHHHhhHhhhhcCCCeee
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE------VGAHIISGNVFEPRALNELLPQWKQEEAPIRV 179 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~------~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~ 179 (592)
++|||+||||||+|+++|+.|++. |++|+||||... +|+.+.+.+|++.+.+......+......
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~------G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~--- 72 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQL------GLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHES--- 72 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH------TCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTT---
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC------CCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHH---
Confidence 469999999999999999999999 999999999863 55555556677665553322211110000
Q ss_pred eccCCcEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCC
Q 007716 180 PVSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKD 259 (592)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~ 259 (592)
.....+. .....++++........+ ...+...+...+++.|++++.+..+. .+. +.+ .|.+.+
T Consensus 73 -~~~~g~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~g~~~~---~~~-~~~-~v~~~~------ 135 (476)
T 3lad_A 73 -FKLHGIS--TGEVAIDVPTMIARKDQI---VRNLTGGVASLIKANGVTLFEGHGKL---LAG-KKV-EVTAAD------ 135 (476)
T ss_dssp -SGGGTEE--CSCCEECHHHHHHHHHHH---HHHHHHHHHHHHHHHTCEEEESEEEE---CST-TCE-EEECTT------
T ss_pred -HHhcCcc--cCCCccCHHHHHHHHHHH---HHHHHHHHHHHHHhCCCEEEEeEEEE---ecC-CEE-EEEcCC------
Confidence 0000000 000000110000000000 02233334455566799999887552 233 333 455433
Q ss_pred CCcccccccceEEEcCEEEEecCCCCc
Q 007716 260 GSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 260 G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|+ ..++.+|.+|+|+|+++.
T Consensus 136 g~-------~~~~~~d~lvlAtG~~p~ 155 (476)
T 3lad_A 136 GS-------SQVLDTENVILASGSKPV 155 (476)
T ss_dssp SC-------EEEECCSCEEECCCEEEC
T ss_pred Cc-------eEEEEcCEEEEcCCCCCC
Confidence 22 157999999999997653
No 122
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.98 E-value=1.1e-09 Score=118.42 Aligned_cols=145 Identities=19% Similarity=0.272 Sum_probs=85.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
+++||+||||||||+++|+.|++. |++|+|||+.+.+|+.+.+.+|++.+.+......+...... ......
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~------g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~---~~~~~g 75 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQL------GFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGT---DFASRG 75 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSS---HHHHTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhh---hHhhCc
Confidence 469999999999999999999999 99999999998899988888888766553221111100000 000000
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEc----HHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCC
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVIS----LSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGS 261 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~----~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~ 261 (592)
+. .....++++ .+... ...+...+.+.+++.||+++.++.+ .+ +. +. +.|.+.+ |.
T Consensus 76 ~~--~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~--~~-~~-~~v~~~~------gg 135 (474)
T 1zmd_A 76 IE--MSEVRLNLD-------KMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGK-IT--GK-NQ-VTATKAD------GG 135 (474)
T ss_dssp EE--ESCEEECHH-------HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEE-EE--ET-TE-EEEECTT------SC
T ss_pred cc--cCCCccCHH-------HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Ee--cC-CE-EEEEecC------CC
Confidence 00 000000000 00000 0123334456667789999999754 22 33 32 3455432 10
Q ss_pred cccccccceEEEcCEEEEecCCCCc
Q 007716 262 KKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 262 ~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
+.++.+|.||+|||.++.
T Consensus 136 -------~~~~~~d~lViAtGs~p~ 153 (474)
T 1zmd_A 136 -------TQVIDTKNILIATGSEVT 153 (474)
T ss_dssp -------EEEEEEEEEEECCCEEEC
T ss_pred -------cEEEEeCEEEECCCCCCC
Confidence 157999999999998764
No 123
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.98 E-value=9.9e-10 Score=118.53 Aligned_cols=146 Identities=21% Similarity=0.267 Sum_probs=85.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHh---hHhhhhcCCCeeeecc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNEL---LPQWKQEEAPIRVPVS 182 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l---l~~~~~~~~~~~~~~~ 182 (592)
+++||+|||||+||+++|+.|++. |++|+|||+.+.+|+.+.+.+|++.+.+... +..+... ..
T Consensus 1 ~~~dvvIIGgG~aGl~aA~~l~~~------g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~-------~~ 67 (468)
T 2qae_A 1 NPYDVVVIGGGPGGYVASIKAAQL------GMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHAN-------FA 67 (468)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHT-------HH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHH-------HH
Confidence 358999999999999999999999 9999999999889998887788876654321 1111100 00
Q ss_pred CCcEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCc
Q 007716 183 SDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSK 262 (592)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~ 262 (592)
...+.. .....+++...+..... -...+...+.+.+++.|++++.++.+. + +. +. +.|.+.+ |+
T Consensus 68 ~~g~~~-~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~v~~~~g~~~~-i--~~-~~-~~v~~~~------G~- 131 (468)
T 2qae_A 68 RYGLMG-GEGVTMDSAKMQQQKER---AVKGLTGGVEYLFKKNKVTYYKGEGSF-E--TA-HS-IRVNGLD------GK- 131 (468)
T ss_dssp HHTEEC-GGGCEECHHHHHHHHHH---HHHHHHHHHHHHHHHHTCEEEEEEEEE-E--ET-TE-EEEEETT------SC-
T ss_pred hcCccc-CCCCccCHHHHHHHHHH---HHHHHHHHHHHHHHhCCCEEEEEEEEE-e--eC-CE-EEEEecC------Cc-
Confidence 000000 00000000000000000 001233445666677899999987552 2 33 32 3455543 21
Q ss_pred ccccccceEEEcCEEEEecCCCCc
Q 007716 263 KENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 263 ~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
..++.+|.+|+|+|+++.
T Consensus 132 ------~~~~~~d~lviAtG~~p~ 149 (468)
T 2qae_A 132 ------QEMLETKKTIIATGSEPT 149 (468)
T ss_dssp ------EEEEEEEEEEECCCEEEC
T ss_pred ------eEEEEcCEEEECCCCCcC
Confidence 167999999999998654
No 124
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.98 E-value=6.2e-08 Score=104.42 Aligned_cols=40 Identities=33% Similarity=0.556 Sum_probs=36.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCC--CcEEEEcCCCCCCCcc
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVD--LSVCVVEKGAEVGAHI 152 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g--~~V~vlEk~~~~g~~~ 152 (592)
.+||+|||||++||++|+.|++. | ++|+|+|+.+.+|+.+
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~------g~~~~v~v~E~~~~~GG~~ 45 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA------FPDLNITLLEAGERLGGKV 45 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH------CTTSEEEEECSSSSSBTTC
T ss_pred cccEEEECCCHHHHHHHHHHHHh------CCCCCEEEEECCCCCCcee
Confidence 58999999999999999999999 8 9999999998888754
No 125
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.97 E-value=2.2e-10 Score=124.00 Aligned_cols=143 Identities=20% Similarity=0.268 Sum_probs=84.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
+++||+||||||+|+++|+.|++. |++|+||||. .+|+.+.+.+|++.+.+............. ..
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~------G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~-------~~ 84 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAEL------GARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDH-------AD 84 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTT-------TT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC------CCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHH-------Hh
Confidence 469999999999999999999999 9999999976 689888888888877654322111110000 00
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
+.+......+++......... ....+...+...+++.||+++.+... ..+.... .|...
T Consensus 85 ~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~gv~~~~g~~~---~~~~~~~--~v~~~------------- 143 (478)
T 3dk9_A 85 YGFPSCEGKFNWRVIKEKRDA---YVSRLNAIYQNNLTKSHIEIIRGHAA---FTSDPKP--TIEVS------------- 143 (478)
T ss_dssp TTSCCCCCCCCHHHHHHHHHH---HHHHHHHHHHHHHHHTTCEEEESCEE---ECSCSSC--EEEET-------------
T ss_pred cCccCCCCccCHHHHHHHHHH---HHHHHHHHHHHHHHhCCcEEEEeEEE---EeeCCeE--EEEEC-------------
Confidence 000000000000000000000 01234455666677789999988633 1222121 24432
Q ss_pred cccceEEEcCEEEEecCCCCc
Q 007716 266 FQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++++|.||+|+|+.+.
T Consensus 144 ---g~~~~~d~lviAtG~~p~ 161 (478)
T 3dk9_A 144 ---GKKYTAPHILIATGGMPS 161 (478)
T ss_dssp ---TEEEECSCEEECCCEEEC
T ss_pred ---CEEEEeeEEEEccCCCCC
Confidence 478999999999997654
No 126
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.97 E-value=6.6e-10 Score=121.54 Aligned_cols=52 Identities=25% Similarity=0.443 Sum_probs=46.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC--------CCCCcccccCccChHHH
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA--------EVGAHIISGNVFEPRAL 163 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~--------~~g~~~~~g~~i~~~~l 163 (592)
.+|||+||||||||++||+.|++. |++|+||||.+ .+|+.|.+.+|++.+.+
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~------G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l 90 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQY------GKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLM 90 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT------TCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC------CCeEEEEeccCccccccCCCcccccCCcCccchHHH
Confidence 469999999999999999999999 99999999954 67888888888887765
No 127
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.97 E-value=3.5e-09 Score=114.24 Aligned_cols=55 Identities=15% Similarity=0.124 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCC
Q 007716 213 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (592)
Q Consensus 213 ~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~ 284 (592)
.|.+.|.+.+++.|++|+++++|++|..++++ ++.|.+. +.++.||.||+|++.+
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~-~~~v~~~----------------~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEG-RWKVSLR----------------DSSLEADHVISAIPAS 289 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGG-CEEEECS----------------SCEEEESEEEECSCHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCc-eEEEEEC----------------CeEEEcCEEEECCCHH
Confidence 57888888888889999999999999887644 3457653 3579999999999864
No 128
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.97 E-value=1.7e-10 Score=125.14 Aligned_cols=139 Identities=17% Similarity=0.255 Sum_probs=83.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhh---HhhhhcCCCeeeeccC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELL---PQWKQEEAPIRVPVSS 183 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll---~~~~~~~~~~~~~~~~ 183 (592)
+|||+||||||+|+++|+.|++. |++|+|||| ..+|+.+.+.+|++.+.+...- ..+....
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~------G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~--------- 89 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGAL------GKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSI--------- 89 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT------TCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHG---------
T ss_pred CCCEEEECcCHHHHHHHHHHHhC------cCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHH---------
Confidence 69999999999999999999999 999999999 5689888888888776653221 1111100
Q ss_pred CcEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcc
Q 007716 184 DKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKK 263 (592)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~ 263 (592)
.+.+......++++....... -....+..++.+.+++.|++++.+. +..+ +. . .|.+..
T Consensus 90 -~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~g~-~~~i--~~-~---~v~v~~---------- 148 (484)
T 3o0h_A 90 -GFGWKYADPIFNWEKLVAAKN---KEISRLEGLYREGLQNSNVHIYESR-AVFV--DE-H---TLELSV---------- 148 (484)
T ss_dssp -GGTBCCCCCEECHHHHHHHHH---HHHHHHHHHHHHHHHHTTCEEEESC-EEEE--ET-T---EEEETT----------
T ss_pred -hCCcccCCCccCHHHHHHHHH---HHHHHHHHHHHHHHHhCCCEEEEeE-EEEe--eC-C---EEEEec----------
Confidence 000000000000000000000 0013455566677778899999884 3333 22 2 244431
Q ss_pred cccccceEEEcCEEEEecCCCCc
Q 007716 264 ENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 264 ~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
++.++.+|.+|+|+|.++.
T Consensus 149 ----~~~~~~~d~lviAtG~~p~ 167 (484)
T 3o0h_A 149 ----TGERISAEKILIATGAKIV 167 (484)
T ss_dssp ----TCCEEEEEEEEECCCEEEC
T ss_pred ----CCeEEEeCEEEEccCCCcc
Confidence 1468999999999998654
No 129
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.96 E-value=1.8e-10 Score=123.91 Aligned_cols=142 Identities=26% Similarity=0.325 Sum_probs=84.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
+|||+||||||||+++|+.|++. |++|+|||+.+.+|+.+.+.+|++.+.+......+..... ....+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~------g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~------~~~g~ 68 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQL------GMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKK------GLLGA 68 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH------CCTTE
T ss_pred CCCEEEECCChhHHHHHHHHHHC------CCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhh------hcCCc
Confidence 37999999999999999999999 9999999999889998888888877655332211111000 00001
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
.+ ....+++...+.....+ ...+...+.+.+++.|++++.++.+. .+. +.+ .|.+ +
T Consensus 69 ~~--~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~v~~~~g~~~~---i~~-~~~-~v~~-~------------- 124 (455)
T 2yqu_A 69 KV--KGVELDLPALMAHKDKV---VQANTQGVEFLFKKNGIARHQGTARF---LSE-RKV-LVEE-T------------- 124 (455)
T ss_dssp EE--CCEEECHHHHHHHHHHH---HHHHHHHHHHHHHHHTCEEEESCEEE---SSS-SEE-EETT-T-------------
T ss_pred cc--CCCccCHHHHHHHHHHH---HHHHHHHHHHHHHhCCCEEEEeEEEE---ecC-CeE-EEee-C-------------
Confidence 00 00000000000000000 01233445566677899999987542 232 322 3432 3
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 007716 267 QRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++.+|.+|+|+|.++.
T Consensus 125 --g~~~~~d~lviAtG~~p~ 142 (455)
T 2yqu_A 125 --GEELEARYILIATGSAPL 142 (455)
T ss_dssp --CCEEEEEEEEECCCEEEC
T ss_pred --CEEEEecEEEECCCCCCC
Confidence 468999999999998654
No 130
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.96 E-value=1.4e-10 Score=125.06 Aligned_cols=143 Identities=15% Similarity=0.171 Sum_probs=84.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
++|||+||||||+|+++|+.|++. |++|+|||| ..+|+.+.+.+|++.+.+........... ....-.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~------G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~-----~~~~~g 71 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAAL------GKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFE-----DAAGFG 71 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT------TCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHH-----HGGGGT
T ss_pred CCCcEEEECcCHHHHHHHHHHHhC------CCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHH-----HHHhcC
Confidence 369999999999999999999999 999999999 66899888888887766533211110000 000000
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
+.. ....++++....... -....+..++.+.+++.|++++.+. +..+ +. . .|.+.+
T Consensus 72 ~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i--~~-~---~v~~~~------------ 127 (463)
T 4dna_A 72 WTV--GESRFDWAKLVAAKE---QEIARLEGLYRKGLANAGAEILDTR-AELA--GP-N---TVKLLA------------ 127 (463)
T ss_dssp EEE--CCCEECHHHHHHHHH---HHHHHHHHHHHHHHHHHTCEEEESC-EEES--SS-S---EEEETT------------
T ss_pred ccc--CCCCcCHHHHHHHHH---HHHHHHHHHHHHHHHhCCCEEEEEE-EEEe--eC-C---EEEEec------------
Confidence 000 000011100000000 0012455566667777899999884 3222 22 2 244421
Q ss_pred cccceEEEcCEEEEecCCCCc
Q 007716 266 FQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~ 286 (592)
++.++.+|.+|+|+|.++.
T Consensus 128 --~~~~~~~d~lviAtG~~p~ 146 (463)
T 4dna_A 128 --SGKTVTAERIVIAVGGHPS 146 (463)
T ss_dssp --TTEEEEEEEEEECCCEEEC
T ss_pred --CCeEEEeCEEEEecCCCcc
Confidence 1478999999999997654
No 131
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.95 E-value=7.7e-10 Score=119.76 Aligned_cols=51 Identities=20% Similarity=0.417 Sum_probs=45.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHH
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l 163 (592)
.++||+|||||++|+++|+.|++. |++|+||||. .+|+.|.+.+|++.+.+
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~------g~~V~liE~~-~~GG~~~n~gciP~k~l 60 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY------GAKTLLVEAK-ALGGTCVNVGCVPKKVM 60 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------SCCEEEEESS-CTTHHHHHHSHHHHHHH
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC------CCcEEEEeCC-CcCCcCcccCcHHHHHH
Confidence 469999999999999999999998 9999999997 58888888888877665
No 132
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.95 E-value=9.1e-09 Score=110.52 Aligned_cols=59 Identities=14% Similarity=0.131 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHcCCEEecCceEEEEEEcC-CCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 212 SQLVRWLGGKAEELGVEIYPGFAASEILYDA-DNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 212 ~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~-~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
..+.+.|.+.+++.|++|+++++|++|..+. ++.+++|++. |.+++||.||.|.|.++.
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~----------------g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTK----------------LGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEET----------------TEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEEC----------------CeEEECCEEEECCCccch
Confidence 5788889999999999999999999998872 3677778763 478999999999998853
No 133
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.94 E-value=2.2e-09 Score=116.86 Aligned_cols=154 Identities=19% Similarity=0.234 Sum_probs=85.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCC-CCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCC
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNV-DLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~-g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~ 184 (592)
|++||||||||++|+++|+.|++. .+ |++|+|||+.. +|+.+.+.+|++.+.+......+..... ....
T Consensus 1 M~~dVvIIGgG~aGl~aA~~l~~~----~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~-----~~~~ 70 (499)
T 1xdi_A 1 MVTRIVILGGGPAGYEAALVAATS----HPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRR-----APHL 70 (499)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHH----CTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTT-----TTTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC----CCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHH-----HHhC
Confidence 368999999999999999999986 23 89999999988 8988888888777665332221111100 0000
Q ss_pred cEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcC--CCcEEEEEeccCcccCCCCc
Q 007716 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDA--DNKVIGIGTNDMGIAKDGSK 262 (592)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~--~g~v~~V~~~d~g~~~~G~~ 262 (592)
.+.+......+++......... -...+...+.+.+++.|++++.++ ++.+..++ ++..+.|.+.+ |+
T Consensus 71 g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~~V~~~~------g~- 139 (499)
T 1xdi_A 71 GFHIDFDDAKISLPQIHARVKT---LAAAQSADITAQLLSMGVQVIAGR-GELIDSTPGLARHRIKATAAD------GS- 139 (499)
T ss_dssp TBC------CBCHHHHHHHHHH---HHHHHHHHHHHHHHHTTCEEEESE-EEECCSSSCCSSEEEEEECTT------SC-
T ss_pred CCccccCCCccCHHHHHHHHHH---HHHHHHHHHHHHHHhCCCEEEEeE-EEEecCcccCCCCEEEEEeCC------Cc-
Confidence 0000000000000000000000 001244456677778899999986 54443210 01233455443 21
Q ss_pred ccccccceEEEcCEEEEecCCCCc
Q 007716 263 KENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 263 ~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
..++.+|.+|+|+|.++.
T Consensus 140 ------~~~~~~d~lviATGs~p~ 157 (499)
T 1xdi_A 140 ------TSEHEADVVLVATGASPR 157 (499)
T ss_dssp ------EEEEEESEEEECCCEEEC
T ss_pred ------EEEEEeCEEEEcCCCCCC
Confidence 037999999999998654
No 134
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.93 E-value=1.3e-09 Score=118.60 Aligned_cols=48 Identities=35% Similarity=0.553 Sum_probs=40.6
Q ss_pred cccccccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCccc
Q 007716 101 MCRESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII 153 (592)
Q Consensus 101 ~~~~~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~ 153 (592)
|.+..+.+||||||||++||+||+.|++. .|.+|+|+|+++.+||.+.
T Consensus 4 Ms~p~~~~DVvIIGaGisGLsaA~~L~k~-----~G~~V~VlE~~~~~GG~~~ 51 (513)
T 4gde_A 4 MTHPDISVDVLVIGAGPTGLGAAKRLNQI-----DGPSWMIVDSNETPGGLAS 51 (513)
T ss_dssp --CCSEEEEEEEECCSHHHHHHHHHHHHH-----CCSCEEEEESSSSCCGGGC
T ss_pred CCCCCCCCCEEEECCcHHHHHHHHHHHhh-----CCCCEEEEECCCCCcCCee
Confidence 33445689999999999999999999984 2899999999999999763
No 135
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.93 E-value=1.3e-09 Score=118.61 Aligned_cols=158 Identities=19% Similarity=0.294 Sum_probs=92.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhh--------cCCCCcEEEEcCCCCCCCcc---cccCccChHHHHHhhHhhhhcC
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCRE--------KNVDLSVCVVEKGAEVGAHI---ISGNVFEPRALNELLPQWKQEE 174 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~--------~~~g~~V~vlEk~~~~g~~~---~~g~~i~~~~l~~ll~~~~~~~ 174 (592)
.-+||||||+||+||++|++|.+.... ...+..++.+||.+..+.|. ..|..++...+..|. ...
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlv----tl~ 113 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLA----TLR 113 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSS----TTT
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhc----ccc
Confidence 459999999999999999999875211 11245677888887766432 112222111111100 000
Q ss_pred CCeeeeccCCcE-EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCC------cEE
Q 007716 175 APIRVPVSSDKF-WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADN------KVI 247 (592)
Q Consensus 175 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g------~v~ 247 (592)
.| .....+ .++.....+ ..+.+...+...|.++.++|...|++.+..|.++++|+++..++++ ..+
T Consensus 114 ~P----~s~~sf~~yl~~~~rl---~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~ 186 (501)
T 4b63_A 114 DP----RSSFTFLNYLHQKGRL---IHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFF 186 (501)
T ss_dssp CT----TCTTSHHHHHHHHTCH---HHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEE
T ss_pred CC----CCccchHHHHHHhCCc---cCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceE
Confidence 00 000000 000000000 0111223445678999999999999988889999999999876532 246
Q ss_pred EEEeccCcccCCCCcccccccceEEEcCEEEEecCCC
Q 007716 248 GIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (592)
Q Consensus 248 ~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~ 284 (592)
.|++.+ ..+|+ ..++.|+.||+|+|..
T Consensus 187 ~V~~~~---~~~g~-------~~~~~ar~vVlatG~~ 213 (501)
T 4b63_A 187 TVRSRN---VETGE-------ISARRTRKVVIAIGGT 213 (501)
T ss_dssp EEEEEE---TTTCC-------EEEEEEEEEEECCCCE
T ss_pred EEEEec---CCCce-------EEEEEeCEEEECcCCC
Confidence 677765 22333 3689999999999953
No 136
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.93 E-value=6.1e-09 Score=105.45 Aligned_cols=114 Identities=22% Similarity=0.283 Sum_probs=79.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEE-EcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCV-VEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~v-lEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
.+||+|||||+|||++|+.|++. |++|+| +|| ..+|+.......+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~------g~~v~li~e~-~~~gG~~~~~~~~~-------------------------- 50 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG------GLKNVVMFEK-GMPGGQITSSSEIE-------------------------- 50 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH------TCSCEEEECS-SSTTGGGGGCSCBC--------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHC------CCCeEEEEeC-CCCCceeeeeceec--------------------------
Confidence 58999999999999999999999 999999 999 55665332110000
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
.+|.. ...+...++..++.+.+++.|++++.+ .|+++ .+++...+.|.+..
T Consensus 51 ----------~~~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~------------ 101 (315)
T 3r9u_A 51 ----------NYPGV-----AQVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEG------------ 101 (315)
T ss_dssp ----------CSTTC-----CSCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETT------------
T ss_pred ----------cCCCC-----CCCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEec------------
Confidence 00000 012355788999999999999999998 88888 55411122332322
Q ss_pred cccceEEEcCEEEEecCCCC
Q 007716 266 FQRGVELRGRITLLAEGCRG 285 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s 285 (592)
++ ++.+|.||+|+|..+
T Consensus 102 --~~-~~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 102 --GK-TELAKAVIVCTGSAP 118 (315)
T ss_dssp --SC-EEEEEEEEECCCEEE
T ss_pred --CC-EEEeCEEEEeeCCCC
Confidence 14 899999999999854
No 137
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.91 E-value=3.8e-10 Score=121.70 Aligned_cols=51 Identities=18% Similarity=0.436 Sum_probs=45.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHH
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l 163 (592)
.++||+|||||++|+++|+.|++. |++|+|||+. .+|+.+.+.+|++.+.+
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~------g~~V~liE~~-~~GG~~~~~gciP~k~l 53 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAF------GKRVALIESK-ALGGTCVNVGCVPKKVM 53 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-CTTHHHHHHSHHHHHHH
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC------CCcEEEEcCC-CCCCcCcCcCchhHHHH
Confidence 368999999999999999999998 9999999998 68888887788876654
No 138
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.91 E-value=5.4e-09 Score=112.47 Aligned_cols=51 Identities=31% Similarity=0.552 Sum_probs=45.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHH
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l 163 (592)
.++||+||||||||+++|+.|++. |++|+|||+ ..+|+.+.+-+|++.+.+
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~------g~~V~lie~-~~~GG~~~~~g~~Psk~l 54 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQL------GIPTVLVEG-QALGGTCLNIGCIPSKAL 54 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHH------TCCEEEECS-SCTTHHHHHHSHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCEEEEEcc-CCCCCcCCCcCcHhHHHH
Confidence 368999999999999999999999 999999999 678988887778876654
No 139
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.90 E-value=1.7e-09 Score=116.69 Aligned_cols=52 Identities=19% Similarity=0.424 Sum_probs=46.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHH
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALN 164 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~ 164 (592)
.++||+|||||++|+++|+.|++. |++|+|||+. .+|+.+.+.+|++.+.+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~------g~~V~lie~~-~~GG~~~~~g~ip~k~l~ 54 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQ------GAQVTLIERG-TIGGTCVNVGCVPSKIMI 54 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESS-STTHHHHHHSHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCEEEEEeCC-CCCccccCCCccchHHHH
Confidence 368999999999999999999998 9999999998 689988888888877653
No 140
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.89 E-value=8.5e-10 Score=119.78 Aligned_cols=51 Identities=27% Similarity=0.484 Sum_probs=45.4
Q ss_pred cccEEEECCCHHHHHHHHHHHH-hhhhcCCCCcEEEEc--------CCCCCCCcccccCccChHHH
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQ-LCREKNVDLSVCVVE--------KGAEVGAHIISGNVFEPRAL 163 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~-~~~~~~~g~~V~vlE--------k~~~~g~~~~~g~~i~~~~l 163 (592)
+|||+||||||+|+++|+.|++ . |++|+||| +...+|+.|.+.+|++.+.+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~------G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l 62 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLH------KKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLM 62 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHH------CCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHH
T ss_pred cccEEEECCCHHHHHHHHHHHHHc------CCEEEEEecccccccccCCCcCccccCCCcchhhHH
Confidence 6899999999999999999999 8 99999999 35568998888888887665
No 141
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.88 E-value=4.7e-09 Score=113.13 Aligned_cols=50 Identities=42% Similarity=0.723 Sum_probs=45.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHH
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l 163 (592)
++||+|||||+||+++|+.|++. |++|+|||+.. +|+.+.+.+|++.+.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~------g~~V~lie~~~-~GG~~~~~g~iP~k~l 55 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQL------GLKVLAVEAGE-VGGVCLNVGCIPTKAL 55 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSC-TTHHHHHTSHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHC------CCeEEEEeCCC-CCCCCCCcChHHHHHH
Confidence 59999999999999999999998 99999999987 8888888888876655
No 142
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.88 E-value=4.1e-09 Score=114.40 Aligned_cols=52 Identities=29% Similarity=0.384 Sum_probs=47.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHH
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNE 165 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ 165 (592)
+|||+||||||||++||+.|++. |++|+||||.. +|+.|.+.+|++.+.+..
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~------G~~V~liE~~~-~GGtc~~~gciPsk~l~~ 59 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKH------TDKVVLIEGGA-YGTTCARVGCMPSKLLIA 59 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT------CSCEEEEESSC-SSCHHHHHSHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC------CCcEEEEeCCC-CCCcccccChhcCHHHHH
Confidence 59999999999999999999999 99999999975 899998889998887644
No 143
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.87 E-value=7.2e-10 Score=119.02 Aligned_cols=51 Identities=18% Similarity=0.408 Sum_probs=45.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHH
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l 163 (592)
.++||+|||||++|+++|+.|++. |++|+|||+. .+|+.|.+.+|++.+.+
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~------g~~V~liE~~-~~GG~~~~~gciP~k~l 53 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMY------GQKCALIEAK-ELGGTCVNVGCVPKKVM 53 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT------TCCEEEEESS-CTTHHHHHHSHHHHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhC------CCeEEEEcCC-CCCCcccccCccChHHH
Confidence 368999999999999999999998 9999999998 68988888888877665
No 144
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.87 E-value=2.3e-09 Score=116.11 Aligned_cols=52 Identities=21% Similarity=0.378 Sum_probs=44.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC---------CCCCcccccCccChHHH
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA---------EVGAHIISGNVFEPRAL 163 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~---------~~g~~~~~g~~i~~~~l 163 (592)
++|||+||||||||+++|+.|++. |++|+||||.. .+|+.|.+.+|++.+.+
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~------G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l 68 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLN------GARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLM 68 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT------TCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCEEEEEEeccccccccccCCcCCeecccCchhhHHH
Confidence 579999999999999999999999 99999999521 27888888888877665
No 145
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.85 E-value=1.5e-08 Score=108.46 Aligned_cols=58 Identities=17% Similarity=0.162 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCC
Q 007716 212 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (592)
Q Consensus 212 ~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~ 284 (592)
+.|.+.|.+.+++.|++|+.+++|++|..++++++++|++.+ |.+++||.||.|.|..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~---------------G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSD---------------GEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETT---------------SCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECC---------------CcEEECCEEEECCCcc
Confidence 688899999999999999999999999985558888999876 6789999999999976
No 146
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.85 E-value=6.7e-10 Score=120.91 Aligned_cols=51 Identities=27% Similarity=0.578 Sum_probs=44.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHH
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l 163 (592)
|++||+|||||+||+++|+.|++. |++|+|||+. .+|+.|.+.+|++.+.+
T Consensus 1 m~~dVvIIGgG~aGl~aA~~l~~~------g~~V~liE~~-~~GG~c~~~gc~P~k~l 51 (500)
T 1onf_A 1 MVYDLIVIGGGSGGMAAARRAARH------NAKVALVEKS-RLGGTCVNVGCVPKKIM 51 (500)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-STTHHHHHTSHHHHHHH
T ss_pred CccCEEEECCCHHHHHHHHHHHHC------CCcEEEEeCC-CcCccccccCCcchHHH
Confidence 469999999999999999999998 9999999998 47888888888876654
No 147
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.82 E-value=9.8e-09 Score=111.51 Aligned_cols=53 Identities=26% Similarity=0.412 Sum_probs=45.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHH-hhhhcCCCCcEEEEc--------CCCCCCCcccccCccChHHHH
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQ-LCREKNVDLSVCVVE--------KGAEVGAHIISGNVFEPRALN 164 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~-~~~~~~~g~~V~vlE--------k~~~~g~~~~~g~~i~~~~l~ 164 (592)
+++||+||||||||+++|+.|++ . |++|+||| +...+|+.|.+.+|++.+.+.
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~------G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~ 67 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLY------GKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMV 67 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHH------CCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHH
T ss_pred cccCEEEECCChhHHHHHHHHHHhc------CCeEEEEecccccccccCCCCCCeeecCCcchHHHHH
Confidence 46999999999999999999999 8 99999999 355688888888888776653
No 148
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.78 E-value=5.3e-09 Score=111.62 Aligned_cols=111 Identities=23% Similarity=0.283 Sum_probs=72.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCC--cEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccC
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSS 183 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~--~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~ 183 (592)
|.+||||||||+||+++|..|++. |. +|+|+|+.+..+... +. + ...+.. .. ..
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~------g~~~~V~lie~~~~~~~~~-------~~-l---~~~~~~-~~-----~~- 58 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRAS------GWEGNIRLVGDATVIPHHL-------PP-L---SKAYLA-GK-----AT- 58 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSCCSCCBCS-------GG-G---GTTTTT-TC-----SC-
T ss_pred CCCcEEEEcCHHHHHHHHHHHHcc------CcCCCEEEEECCCCCCCcC-------CC-C---cHHHhC-CC-----CC-
Confidence 468999999999999999999998 87 799999876543210 00 0 000000 00 00
Q ss_pred CcEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcc
Q 007716 184 DKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKK 263 (592)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~ 263 (592)
.. .+...+.+.+++.|++++.+++|+.+..++ . .|.+.+
T Consensus 59 --------------~~-------------~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~-~---~v~~~~---------- 97 (431)
T 1q1r_A 59 --------------AE-------------SLYLRTPDAYAAQNIQLLGGTQVTAINRDR-Q---QVILSD---------- 97 (431)
T ss_dssp --------------SG-------------GGBSSCHHHHHHTTEEEECSCCEEEEETTT-T---EEEETT----------
T ss_pred --------------hH-------------HhcccCHHHHHhCCCEEEeCCEEEEEECCC-C---EEEECC----------
Confidence 00 000001233456899999999999887654 2 355554
Q ss_pred cccccceEEEcCEEEEecCCCCc
Q 007716 264 ENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 264 ~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++.+|.||+|+|.++.
T Consensus 98 -----g~~~~~d~lviAtG~~p~ 115 (431)
T 1q1r_A 98 -----GRALDYDRLVLATGGRPR 115 (431)
T ss_dssp -----SCEEECSEEEECCCEEEC
T ss_pred -----CCEEECCEEEEcCCCCcc
Confidence 568999999999998764
No 149
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.77 E-value=1.4e-08 Score=108.98 Aligned_cols=115 Identities=17% Similarity=0.198 Sum_probs=72.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.+||||||||+||+++|..|++. .+|.+|+|||+.+.+|... ++ +...+.. .
T Consensus 2 ~~~VvIIGgG~AGl~aA~~L~~~----~~g~~V~vie~~~~~g~~~-~~-------~~~~~~~--~-------------- 53 (452)
T 3oc4_A 2 SLKIVIIGASFAGISAAIASRKK----YPQAEISLIDKQATVGYLS-GG-------LSAYFNH--T-------------- 53 (452)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH----CSSSEEEEECSSSCCSSCC-C--------------------------------
T ss_pred CCCEEEECCCHHHHHHHHHHHhh----CcCCcEEEEECCCCCcccC-cc-------chhhhcC--C--------------
Confidence 36899999999999999999986 4589999999998765310 00 0000000 0
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
. .+...+...+.+.+++.|++++.+++|+++..++ ..+ .+...+
T Consensus 54 --------~-------------~~~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~-~~v-~v~~~~------------- 97 (452)
T 3oc4_A 54 --------I-------------NELHEARYITEEELRRQKIQLLLNREVVAMDVEN-QLI-AWTRKE------------- 97 (452)
T ss_dssp ----------------------------CCCCHHHHHHTTEEEECSCEEEEEETTT-TEE-EEEETT-------------
T ss_pred --------C-------------CCHHHhhcCCHHHHHHCCCEEEECCEEEEEECCC-CEE-EEEecC-------------
Confidence 0 0000111112344456899999999999987765 322 343111
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 007716 267 QRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~ 286 (592)
++.++.+|.+|+|+|+++.
T Consensus 98 -~~~~~~~d~lviAtG~~p~ 116 (452)
T 3oc4_A 98 -EQQWYSYDKLILATGASQF 116 (452)
T ss_dssp -EEEEEECSEEEECCCCCBC
T ss_pred -ceEEEEcCEEEECCCcccC
Confidence 1578999999999998764
No 150
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.73 E-value=1.4e-08 Score=106.59 Aligned_cols=110 Identities=18% Similarity=0.193 Sum_probs=73.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
....|+|||||+||++||..|++. +.+|+|||+.+..+... -.+...+..... .
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~------~~~itlie~~~~~~y~~--------~~l~~~l~g~~~----------~-- 61 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGK------CDDITMINSEKYLPYYR--------PRLNEIIAKNKS----------I-- 61 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTT------CSCEEEECSSSSCCBCG--------GGHHHHHHSCCC----------G--
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCC------CCEEEEEECCCCCCccc--------ChhhHHHcCCCC----------H--
Confidence 357799999999999999999655 99999999988655311 112111111000 0
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
.++...+.+.+++.|++++.+++|+++..++ . .|++.+
T Consensus 62 --------------------------~~l~~~~~~~~~~~~i~~~~~~~V~~id~~~-~---~v~~~~------------ 99 (385)
T 3klj_A 62 --------------------------DDILIKKNDWYEKNNIKVITSEFATSIDPNN-K---LVTLKS------------ 99 (385)
T ss_dssp --------------------------GGTBSSCHHHHHHTTCEEECSCCEEEEETTT-T---EEEETT------------
T ss_pred --------------------------HHccCCCHHHHHHCCCEEEeCCEEEEEECCC-C---EEEECC------------
Confidence 0011112233456799999999999997665 2 366655
Q ss_pred cccceEEEcCEEEEecCCCCc
Q 007716 266 FQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++.+|.+|+|+|+++.
T Consensus 100 ---g~~~~yd~lvlAtG~~p~ 117 (385)
T 3klj_A 100 ---GEKIKYEKLIIASGSIAN 117 (385)
T ss_dssp ---SCEEECSEEEECCCEEEC
T ss_pred ---CCEEECCEEEEecCCCcC
Confidence 678999999999997543
No 151
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.73 E-value=6.9e-09 Score=112.62 Aligned_cols=114 Identities=20% Similarity=0.248 Sum_probs=72.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCC---CcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeecc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVD---LSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVS 182 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g---~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~ 182 (592)
|++||||||||+||+++|+.|++. | .+|+|||+...++.. .+ .+ +.|.... . ..
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~------g~~~~~V~lie~~~~~~~~-~~-------~~----~~~~~~~--~---~~ 90 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTN------YGDANEIVVFDQNSNISFL-GA-------GM----ALWIGEQ--I---AG 90 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH------HGGGSEEEEECSSSCCSBC-GG-------GH----HHHHTTS--S---SC
T ss_pred cCCcEEEECCCHHHHHHHHHHHhc------CCCCCeEEEEECCCCCCcc-cc-------cc----chhhcCc--c---CC
Confidence 569999999999999999999998 6 999999998765431 11 11 1111100 0 00
Q ss_pred CCcEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCc
Q 007716 183 SDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSK 262 (592)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~ 262 (592)
...+. ..+.+.+++.|++++.+++|+.+..++ +.+ .|.. + |
T Consensus 91 ---------~~~~~-------------------~~~~~~~~~~gv~v~~~~~v~~i~~~~-~~v-~v~~-~------g-- 131 (490)
T 2bc0_A 91 ---------PEGLF-------------------YSDKEELESLGAKVYMESPVQSIDYDA-KTV-TALV-D------G-- 131 (490)
T ss_dssp ---------SGGGB-------------------SCCHHHHHHTTCEEETTCCEEEEETTT-TEE-EEEE-T------T--
T ss_pred ---------HHHhh-------------------hcCHHHHHhCCCEEEeCCEEEEEECCC-CEE-EEEe-C------C--
Confidence 00000 001233456799999999999887655 322 2331 2 1
Q ss_pred ccccccceEEEcCEEEEecCCCCc
Q 007716 263 KENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 263 ~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
.+.++.+|.+|+|+|.++.
T Consensus 132 -----~~~~~~~d~lviAtG~~p~ 150 (490)
T 2bc0_A 132 -----KNHVETYDKLIFATGSQPI 150 (490)
T ss_dssp -----EEEEEECSEEEECCCEEEC
T ss_pred -----cEEEEECCEEEECCCCCcC
Confidence 1367999999999997654
No 152
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.69 E-value=3.1e-08 Score=106.21 Aligned_cols=111 Identities=23% Similarity=0.255 Sum_probs=68.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.+||||||||+||+++|..|++. +++.+|+|||+.+.++... + .+ +.+.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~----~~~~~V~vie~~~~~~~~~-~-------~~----p~~~--------------- 51 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRL----KPEWDVKVFEATEWVSHAP-C-------GI----PYVV--------------- 51 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH----CTTSEEEEECSSSCCC-------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHh----CcCCCEEEEECCCccccCC-c-------CC----cccc---------------
Confidence 47899999999999999999987 3478999999988654311 0 00 0000
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHH-HHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKA-EELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a-~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
... .....+.....+.. ++.|++++.+++|+.+..+. ..|.+.+
T Consensus 52 ---~~~----------------~~~~~~~~~~~~~~~~~~gi~v~~~~~v~~i~~~~----~~v~~~~------------ 96 (449)
T 3kd9_A 52 ---EGL----------------STPDKLMYYPPEVFIKKRGIDLHLNAEVIEVDTGY----VRVRENG------------ 96 (449)
T ss_dssp ---------------------------------CTHHHHTTCEEETTCEEEEECSSE----EEEECSS------------
T ss_pred ---CCC----------------CCHHHhhhcCHHHHHHhcCcEEEecCEEEEEecCC----CEEEECC------------
Confidence 000 00012222222223 56899999999998875432 2355443
Q ss_pred cccc-eEEEcCEEEEecCCCCc
Q 007716 266 FQRG-VELRGRITLLAEGCRGS 286 (592)
Q Consensus 266 f~~g-~~i~a~~vI~A~G~~s~ 286 (592)
| .++.+|.||+|+|+++.
T Consensus 97 ---g~~~~~~d~lviAtG~~p~ 115 (449)
T 3kd9_A 97 ---GEKSYEWDYLVFANGASPQ 115 (449)
T ss_dssp ---SEEEEECSEEEECCCEEEC
T ss_pred ---ceEEEEcCEEEECCCCCCC
Confidence 3 48999999999997543
No 153
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.68 E-value=1e-07 Score=104.04 Aligned_cols=41 Identities=39% Similarity=0.513 Sum_probs=38.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCC-CcEEEEcCCCCCCCcc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVD-LSVCVVEKGAEVGAHI 152 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g-~~V~vlEk~~~~g~~~ 152 (592)
+.+||+|||||++||+||+.|++. | .+|+|+|+++.+||.+
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~------G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQN------GIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHT------TCCSEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhc------CCCCEEEEeCCCCCCCce
Confidence 358999999999999999999998 9 9999999999999875
No 154
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.67 E-value=2.5e-07 Score=98.67 Aligned_cols=58 Identities=14% Similarity=0.183 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 212 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 212 ~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
..+.+.|.+.+++.|++|+++++|++|..++ +.+++|.+. |.+++||.||.|.|.++.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~-~~v~~v~~~----------------g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMEN-GKVVGVKSE----------------GEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEET-TEEEEEEET----------------TEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeC-CEEEEEEEC----------------CeEEECCEEEECCCCCcc
Confidence 5888889999999999999999999998876 667677653 578999999999998863
No 155
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.66 E-value=1.3e-07 Score=101.11 Aligned_cols=41 Identities=49% Similarity=0.752 Sum_probs=38.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~ 152 (592)
.++||+|||||++||+||+.|++. |++|+|+|++..+|+.+
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~------g~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA------GLSVAVIEARDRVGGRT 44 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCcEEEEECCCCCCCce
Confidence 358999999999999999999998 99999999999888865
No 156
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.65 E-value=2.9e-08 Score=106.02 Aligned_cols=106 Identities=22% Similarity=0.258 Sum_probs=72.8
Q ss_pred ccEEEECCCHHHHHHHHHHHH---hhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQ---LCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~---~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~ 184 (592)
.||||||||++|+++|..|++ . |++|+|||+.+..... + .+..+...+
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~------g~~Vtlie~~~~~~~~--------~-~~~~~~~g~-------------- 55 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGS------GHEVTLISANDYFQFV--------P-SNPWVGVGW-------------- 55 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGG------GSEEEEECSSSEEECG--------G-GHHHHHHTS--------------
T ss_pred CcEEEECCcHHHHHHHHHHhccCCC------cCEEEEEeCCCCCccc--------C-CccccccCc--------------
Confidence 689999999999999999999 5 9999999998743210 0 010110000
Q ss_pred cEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccc
Q 007716 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (592)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~ 264 (592)
....++...+.+.+++.||+++. .+|+.+..++ . .|.+.+
T Consensus 56 ------------------------~~~~~~~~~l~~~~~~~gv~~~~-~~v~~id~~~-~---~V~~~~----------- 95 (437)
T 3sx6_A 56 ------------------------KERDDIAFPIRHYVERKGIHFIA-QSAEQIDAEA-Q---NITLAD----------- 95 (437)
T ss_dssp ------------------------SCHHHHEEECHHHHHTTTCEEEC-SCEEEEETTT-T---EEEETT-----------
T ss_pred ------------------------cCHHHHHHHHHHHHHHCCCEEEE-eEEEEEEcCC-C---EEEECC-----------
Confidence 01123333455666678999985 5888887654 2 366654
Q ss_pred ccccceEEEcCEEEEecCCCCc
Q 007716 265 NFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 265 ~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++.+|.||+|+|+++.
T Consensus 96 ----g~~i~~d~lviAtG~~~~ 113 (437)
T 3sx6_A 96 ----GNTVHYDYLMIATGPKLA 113 (437)
T ss_dssp ----SCEEECSEEEECCCCEEC
T ss_pred ----CCEEECCEEEECCCCCcC
Confidence 568999999999998765
No 157
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.65 E-value=1.8e-08 Score=106.83 Aligned_cols=111 Identities=24% Similarity=0.277 Sum_probs=72.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCc--EEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccC
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLS--VCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSS 183 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~--V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~ 183 (592)
+.+||||||||+||+++|..|++. |.+ |+|+|+.+..+.... .+ ...+..
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~------g~~~~V~lie~~~~~~y~~~--------~l---~~~~~~----------- 59 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQN------GFEGRVLVIGREPEIPYERP--------PL---SKEYLA----------- 59 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------TCCSCEEEEESSSSCCBCSG--------GG---GTTTTT-----------
T ss_pred CCCcEEEECChHHHHHHHHHHHcc------CcCCCEEEEecCCCCCcCcc--------cC---CHHHHc-----------
Confidence 468999999999999999999998 776 999999876543110 00 000000
Q ss_pred CcEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcc
Q 007716 184 DKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKK 263 (592)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~ 263 (592)
... .. ..+.....+..++.|++++.+++|+.+..+. . .|.+.+
T Consensus 60 -------~~~--~~--------------~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~-~---~v~~~~---------- 102 (415)
T 3lxd_A 60 -------REK--TF--------------ERICIRPAQFWEDKAVEMKLGAEVVSLDPAA-H---TVKLGD---------- 102 (415)
T ss_dssp -------TSS--CS--------------GGGBSSCHHHHHHTTEEEEETCCEEEEETTT-T---EEEETT----------
T ss_pred -------CCC--CH--------------HHhccCCHHHHHHCCcEEEeCCEEEEEECCC-C---EEEECC----------
Confidence 000 00 0011111233456899999999999887654 2 355554
Q ss_pred cccccceEEEcCEEEEecCCCCc
Q 007716 264 ENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 264 ~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++.+|.+|+|+|+++.
T Consensus 103 -----g~~~~~d~lvlAtG~~~~ 120 (415)
T 3lxd_A 103 -----GSAIEYGKLIWATGGDPR 120 (415)
T ss_dssp -----SCEEEEEEEEECCCEECC
T ss_pred -----CCEEEeeEEEEccCCccC
Confidence 578999999999997643
No 158
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.64 E-value=4.5e-08 Score=108.61 Aligned_cols=119 Identities=17% Similarity=0.179 Sum_probs=75.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
+..||||||||+||+++|..|++. ++|.+|+|||+.+.++... -.+...+..+..
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~----~~g~~V~vie~~~~~~~~~--------~~lp~~~~g~~~------------- 89 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRL----SEEDEIIMVERGEYISFAN--------CGLPYYIGGVIT------------- 89 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH----CSSSEEEEECSSSCSSBCG--------GGHHHHHTTSSC-------------
T ss_pred cCCCEEEECCcHHHHHHHHHHHhh----CcCCCEEEEECCCCccccC--------CCCchhhcCcCC-------------
Confidence 457999999999999999999987 4579999999998765311 111111100000
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
+ ....+...+...+++.|++++++++|+++..++ +.+ .+...+ +|+
T Consensus 90 ------------~-----------~~~~~~~~~~~~~~~~gi~v~~~~~V~~id~~~-~~v-~v~~~~-----~g~---- 135 (588)
T 3ics_A 90 ------------E-----------RQKLLVQTVERMSKRFNLDIRVLSEVVKINKEE-KTI-TIKNVT-----TNE---- 135 (588)
T ss_dssp ------------C-----------GGGGBSSCHHHHHHHTTCEEECSEEEEEEETTT-TEE-EEEETT-----TCC----
T ss_pred ------------C-----------hHHhhccCHHHHHHhcCcEEEECCEEEEEECCC-CEE-EEeecC-----CCC----
Confidence 0 000112224445566899999999999998765 333 343211 121
Q ss_pred cccceEEEcCEEEEecCCCCc
Q 007716 266 FQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~ 286 (592)
..++.+|.+|+|+|.++.
T Consensus 136 ---~~~~~~d~lviAtG~~p~ 153 (588)
T 3ics_A 136 ---TYNEAYDVLILSPGAKPI 153 (588)
T ss_dssp ---EEEEECSEEEECCCEEEC
T ss_pred ---EEEEeCCEEEECCCCCCC
Confidence 137899999999997543
No 159
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.63 E-value=1.2e-08 Score=108.63 Aligned_cols=109 Identities=24% Similarity=0.345 Sum_probs=70.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
..||||||||++|+++|+.|++. .+|.+|+|||+.+..+... .+..+...+.. .+
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~----~~g~~Vtlie~~~~~~~~~---------~~~~~~~g~~~----------~~-- 56 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNL----MPDLKITLISDRPYFGFTP---------AFPHLAMGWRK----------FE-- 56 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHH----CTTCEEEEECSSSEEECGG---------GHHHHHHTCSC----------GG--
T ss_pred CCCEEEECccHHHHHHHHHHHcC----CCCCeEEEECCCCCCCcCC---------CcchhccCccC----------HH--
Confidence 46899999999999999999993 1289999999987654311 11111111100 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
++...+.+.+++.|++++.+ .|+.+..++ . .|.+.+
T Consensus 57 --------------------------~~~~~~~~~~~~~gv~~~~~-~v~~id~~~-~---~v~~~~------------- 92 (430)
T 3h28_A 57 --------------------------DISVPLAPLLPKFNIEFINE-KAESIDPDA-N---TVTTQS------------- 92 (430)
T ss_dssp --------------------------GSEEESTTTGGGGTEEEECS-CEEEEETTT-T---EEEETT-------------
T ss_pred --------------------------HHHHHHHHHHHhcCCEEEEE-EEEEEECCC-C---EEEECC-------------
Confidence 00001222344578999875 788876554 2 355554
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 007716 267 QRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++.+|.+|+|+|.+..
T Consensus 93 --g~~i~~d~liiAtG~~~~ 110 (430)
T 3h28_A 93 --GKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp --CCEEECSEEEECCCCEEE
T ss_pred --CcEEECCEEEEcCCcccc
Confidence 568999999999998754
No 160
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.63 E-value=2.6e-07 Score=101.81 Aligned_cols=71 Identities=15% Similarity=0.309 Sum_probs=51.5
Q ss_pred HHHHHHHHHHcCCEEecCceEEEEEEcC---CCcEEEEEeccCcccCCCCcccccccceEEEcC-EEEEecCCCCcchHH
Q 007716 215 VRWLGGKAEELGVEIYPGFAASEILYDA---DNKVIGIGTNDMGIAKDGSKKENFQRGVELRGR-ITLLAEGCRGSLSEK 290 (592)
Q Consensus 215 ~~~L~~~a~~~Gv~i~~g~~v~~i~~~~---~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~-~vI~A~G~~s~vr~~ 290 (592)
..+|...+.+.+++|++++.|++|+.++ +++++||++.+ ++|+. .+++|+ -||+|.|+..+ -|
T Consensus 230 ~ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~----~~G~~-------~~v~A~kEVILsAGa~~S--Pq 296 (583)
T 3qvp_A 230 REWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGT----HKGNT-------HNVYAKHEVLLAAGSAVS--PT 296 (583)
T ss_dssp HHHTTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEES----STTCE-------EEEEEEEEEEECSCTTTH--HH
T ss_pred HHHHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEe----cCCcE-------EEEEECCEEEEeCCccCC--HH
Confidence 3445444455689999999999999984 47889998864 34543 678886 69999999875 45
Q ss_pred HHHHcCCC
Q 007716 291 LIKNFKLR 298 (592)
Q Consensus 291 l~~~~~l~ 298 (592)
|+...|+-
T Consensus 297 LL~lSGIG 304 (583)
T 3qvp_A 297 ILEYSGIG 304 (583)
T ss_dssp HHHHTTBS
T ss_pred HHHHcCCC
Confidence 65555654
No 161
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.61 E-value=4.8e-08 Score=102.40 Aligned_cols=109 Identities=24% Similarity=0.224 Sum_probs=69.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCC--CcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccC
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVD--LSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSS 183 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g--~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~ 183 (592)
+.+||+|||||+||+++|+.|++. | .+|+|+|+.. |. +..+.+ +..+.
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~------g~~~~V~lie~~~--g~-------~~~~~~---l~~~~------------ 52 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKL------DGETPLLMITADD--GR-------SYSKPM---LSTGF------------ 52 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTT------CSSSCEEEECSSC--CC-------EECGGG---GGGTT------------
T ss_pred CCCcEEEECChHHHHHHHHHHHhh------CCCCCEEEEECCC--CC-------ccCccc---ccHHH------------
Confidence 358999999999999999999998 7 6799999875 21 110100 00000
Q ss_pred CcEEEeecCCcccCCCCCCCCCcEEEcHHHHHH-HHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCc
Q 007716 184 DKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVR-WLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSK 262 (592)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~-~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~ 262 (592)
+. . .....+.. .+.+.+++.|++++.+++|+.+..++ . .|.+.+
T Consensus 53 --------------~~------~--~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~-~---~v~~~~--------- 97 (384)
T 2v3a_A 53 --------------SK------N--KDADGLAMAEPGAMAEQLNARILTHTRVTGIDPGH-Q---RIWIGE--------- 97 (384)
T ss_dssp --------------TT------T--CCHHHHEEECHHHHHHHTTCEEECSCCCCEEEGGG-T---EEEETT---------
T ss_pred --------------hC------C--CCHHHhhccCHHHHHHhCCcEEEeCCEEEEEECCC-C---EEEECC---------
Confidence 00 0 00122221 23344466899999999998887654 2 245543
Q ss_pred ccccccceEEEcCEEEEecCCCCc
Q 007716 263 KENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 263 ~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
.++.+|.+|+|+|+++.
T Consensus 98 -------~~~~~d~lviAtG~~p~ 114 (384)
T 2v3a_A 98 -------EEVRYRDLVLAWGAEPI 114 (384)
T ss_dssp -------EEEECSEEEECCCEEEC
T ss_pred -------cEEECCEEEEeCCCCcC
Confidence 57999999999998654
No 162
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.61 E-value=6e-08 Score=102.60 Aligned_cols=108 Identities=23% Similarity=0.255 Sum_probs=70.7
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCC--cEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeecc
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVS 182 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~--~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~ 182 (592)
.+.+||+|||||+||+++|..|++. |. +|+|+|+.+.++... +..++ .++. . ..
T Consensus 5 ~~~~~vvIIG~G~aGl~aA~~l~~~------g~~~~V~lie~~~~~~~~~----~~~~~---~~~~---~-~~------- 60 (408)
T 2gqw_A 5 ALKAPVVVLGAGLASVSFVAELRQA------GYQGLITVVGDEAERPYDR----PPLSK---DFMA---H-GD------- 60 (408)
T ss_dssp -CCSSEEEECCSHHHHHHHHHHHHH------TCCSCEEEEESSCSCCBCS----GGGGT---HHHH---H-CC-------
T ss_pred CCCCcEEEECChHHHHHHHHHHHcc------CCCCeEEEEECCCCCcccC----CCCCH---HHhC---C-Cc-------
Confidence 3568999999999999999999998 77 599999987543210 00000 0110 0 00
Q ss_pred CCcEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCc
Q 007716 183 SDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSK 262 (592)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~ 262 (592)
.+. + .+. .+++.|++++.+++|+.+..+. . .|.+.+
T Consensus 61 ~~~-----------~----------~~~----------~~~~~~v~~~~~~~v~~i~~~~-~---~v~~~~--------- 96 (408)
T 2gqw_A 61 AEK-----------I----------RLD----------CKRAPEVEWLLGVTAQSFDPQA-H---TVALSD--------- 96 (408)
T ss_dssp GGG-----------S----------BCC----------CTTSCSCEEEETCCEEEEETTT-T---EEEETT---------
T ss_pred hhh-----------h----------hHH----------HHHHCCCEEEcCCEEEEEECCC-C---EEEECC---------
Confidence 000 0 000 2235789999999999887653 2 355554
Q ss_pred ccccccceEEEcCEEEEecCCCCc
Q 007716 263 KENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 263 ~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++.+|.+|+|+|+++.
T Consensus 97 ------g~~~~~d~lviAtG~~~~ 114 (408)
T 2gqw_A 97 ------GRTLPYGTLVLATGAAPR 114 (408)
T ss_dssp ------SCEEECSEEEECCCEEEC
T ss_pred ------CCEEECCEEEECCCCCCC
Confidence 568999999999998654
No 163
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.60 E-value=3.1e-08 Score=103.30 Aligned_cols=35 Identities=40% Similarity=0.550 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEV 148 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~ 148 (592)
..||+|||||+||+++|..|++. | +|+|+|+....
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~------g-~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQT------Y-EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTT------S-EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhc------C-CEEEEECCCCC
Confidence 46899999999999999999998 8 99999998753
No 164
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.60 E-value=9.3e-08 Score=108.09 Aligned_cols=44 Identities=34% Similarity=0.560 Sum_probs=39.2
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccc
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIIS 154 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~ 154 (592)
...+||+|||||+|||++|+.|++. |++|+|||+.+.+|+....
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~------G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVR------GYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSSSSCTHHHH
T ss_pred cccceEEEECCCHHHHHHHHHHHHC------CCeEEEEecCCCCCCEeee
Confidence 3468999999999999999999999 9999999999888876543
No 165
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.60 E-value=1.6e-07 Score=104.62 Aligned_cols=40 Identities=35% Similarity=0.531 Sum_probs=35.7
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCC
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGA 150 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~ 150 (592)
.+++||||||||++|+++|+.|++. |++|+||||....++
T Consensus 44 ~~~~dvvIIG~G~aGl~aA~~l~~~------G~~V~liE~~~~~gg 83 (623)
T 3pl8_A 44 DIKYDVVIVGSGPIGCTYARELVGA------GYKVAMFDIGEIDSG 83 (623)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCCSS
T ss_pred cccCCEEEECCcHHHHHHHHHHHhC------CCcEEEEeccCCCCC
Confidence 3469999999999999999999998 999999999887665
No 166
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.59 E-value=1e-07 Score=111.54 Aligned_cols=123 Identities=21% Similarity=0.281 Sum_probs=79.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
..+|||||||||||++||+.|++. |++|+|||+.+.+|+.+.. + ++.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~------G~~V~lie~~~~~GG~~~~--~--~k~----------------------- 173 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRS------GARVMLLDERAEAGGTLLD--T--AGE----------------------- 173 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSSGGGGG--S--SCC-----------------------
T ss_pred cCCCEEEECCCHHHHHHHHHHHhC------CCcEEEEeCCCCCCceecc--C--Ccc-----------------------
Confidence 468999999999999999999999 9999999999888764431 0 000
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHc-CCEEecCceEEEEEEcCCCcEEEEEecc--CcccC-CCC
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVIGIGTND--MGIAK-DGS 261 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~-Gv~i~~g~~v~~i~~~~~g~v~~V~~~d--~g~~~-~G~ 261 (592)
.+. + ....++...+.+++.+. +++++.++.|.++..+ +.+..+.... ..+.. ++.
T Consensus 174 --~i~---------------~--~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i~~~--~~~~~v~~~~~~~~v~~~~~~ 232 (965)
T 2gag_A 174 --QID---------------G--MDSSAWIEQVTSELAEAEETTHLQRTTVFGSYDA--NYLIAAQRRTVHLDGPSGPGV 232 (965)
T ss_dssp --EET---------------T--EEHHHHHHHHHHHHHHSTTEEEESSEEEEEEETT--TEEEEEEECSTTCSSCCCTTC
T ss_pred --ccC---------------C--CCHHHHHHHHHHHHhhcCCcEEEeCCEEEeeecC--CceeeeEeecccccccccccC
Confidence 000 0 01234555666667765 8999999999887633 3343332211 00000 000
Q ss_pred cccccccceEEEcCEEEEecCCCC
Q 007716 262 KKENFQRGVELRGRITLLAEGCRG 285 (592)
Q Consensus 262 ~~~~f~~g~~i~a~~vI~A~G~~s 285 (592)
+ -+.+.++.+|.||+|+|++.
T Consensus 233 ~---~~~~~~i~~d~lVlATGs~p 253 (965)
T 2gag_A 233 S---RERIWHIRAKQVVLATGAHE 253 (965)
T ss_dssp C---SEEEEEEEEEEEEECCCEEE
T ss_pred C---CCceEEEECCEEEECCCCcc
Confidence 0 01235799999999999864
No 167
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.59 E-value=5.1e-08 Score=107.42 Aligned_cols=52 Identities=15% Similarity=0.355 Sum_probs=40.5
Q ss_pred HcCCEEecCceEEEEEEcC-CCcEEEEEeccCcccCCCCcccccccceEEEc-CEEEEecCCCCc
Q 007716 224 ELGVEIYPGFAASEILYDA-DNKVIGIGTNDMGIAKDGSKKENFQRGVELRG-RITLLAEGCRGS 286 (592)
Q Consensus 224 ~~Gv~i~~g~~v~~i~~~~-~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a-~~vI~A~G~~s~ 286 (592)
+.|++|++++.|++|..++ +++++||.+.+ .+|.. .+++| +-||+|.|+..+
T Consensus 218 r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~----~~g~~-------~~v~A~keVILsaGa~~s 271 (577)
T 3q9t_A 218 KPNITIVPEVHSKRLIINEADRTCKGVTVVT----AAGNE-------LNFFADREVILSQGVFET 271 (577)
T ss_dssp CTTEEEECSEEEEEEEEETTTTEEEEEEEEE----TTSCE-------EEEEEEEEEEECSHHHHH
T ss_pred CCCeEEEcCcEEEEEEEeCCCCEEEEEEEEe----CCCcE-------EEEEeeeEEEEcccccCC
Confidence 4579999999999999984 36888998864 23442 57888 679999998754
No 168
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.58 E-value=9e-08 Score=103.24 Aligned_cols=124 Identities=21% Similarity=0.189 Sum_probs=63.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
..||+|||||+||+++|..|++. .+|.+|+|||+.+.++... ++ +...+.....
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~----~~g~~Vtvie~~~~~~~~~-~g-------l~~~~~g~~~-------------- 56 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRL----DPEAHVTMIDQASRISYGG-CG-------IPYYVSGEVS-------------- 56 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHH----CTTSEEEEECCC-----------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhh----CcCCCEEEEECCCcccccc-cc-------cchhhcCCCC--------------
Confidence 36899999999999999999986 4589999999988654210 00 0000000000
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
... .+ .+ .+..+...+...+++.|++++.+++|+++..++ ..+ .+... .+|+
T Consensus 57 ---~~~-~~-~~-----------~~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~-~~v-~~~~~-----~~g~----- 108 (472)
T 3iwa_A 57 ---NIE-SL-QA-----------TPYNVVRDPEFFRINKDVEALVETRAHAIDRAA-HTV-EIENL-----RTGE----- 108 (472)
T ss_dssp ----------------------------------------CEEECSEEEEEEETTT-TEE-EEEET-----TTCC-----
T ss_pred ---chH-Hh-cc-----------ccchhccCHHHHhhhcCcEEEECCEEEEEECCC-CEE-EEeec-----CCCC-----
Confidence 000 00 00 001123333333445789999999999987655 322 33321 1122
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 007716 267 QRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~ 286 (592)
..++.+|.+|+|+|..+.
T Consensus 109 --~~~~~~d~lviAtG~~p~ 126 (472)
T 3iwa_A 109 --RRTLKYDKLVLALGSKAN 126 (472)
T ss_dssp --EEEEECSEEEECCCEEEC
T ss_pred --EEEEECCEEEEeCCCCcC
Confidence 148999999999997543
No 169
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.58 E-value=4.8e-07 Score=95.47 Aligned_cols=111 Identities=24% Similarity=0.364 Sum_probs=89.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
...|+|||+|..|+.+|..|++. |.+|+++|+.+.+....
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtvv~~~~~~~~~~---------------------------------- 181 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAK------GLEVDVVELAPRVMARV---------------------------------- 181 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSTTTTT----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCCcchhhc----------------------------------
Confidence 35799999999999999999999 99999999876432100
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
+ ...+.+.+.+.+++.||++++++.|+++..++ +.+.+|.+.|
T Consensus 182 ----------~-------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~~V~~~d------------- 224 (404)
T 3fg2_P 182 ----------V-------------TPEISSYFHDRHSGAGIRMHYGVRATEIAAEG-DRVTGVVLSD------------- 224 (404)
T ss_dssp ----------S-------------CHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETT-------------
T ss_pred ----------c-------------CHHHHHHHHHHHHhCCcEEEECCEEEEEEecC-CcEEEEEeCC-------------
Confidence 0 03567778888888999999999999998765 6677888876
Q ss_pred ccceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 007716 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~ 298 (592)
|.++.||.||.|+|.++.. .+.+..++.
T Consensus 225 --G~~i~aD~Vv~a~G~~p~~--~l~~~~gl~ 252 (404)
T 3fg2_P 225 --GNTLPCDLVVVGVGVIPNV--EIAAAAGLP 252 (404)
T ss_dssp --SCEEECSEEEECCCEEECC--HHHHHTTCC
T ss_pred --CCEEEcCEEEECcCCccCH--HHHHhCCCC
Confidence 6789999999999998764 355566766
No 170
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.57 E-value=2.7e-08 Score=105.31 Aligned_cols=109 Identities=17% Similarity=0.267 Sum_probs=70.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCc--EEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLS--VCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~--V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~ 184 (592)
..||||||||+||+++|..|++. |.+ |+|+|+.+..+.... .+ ...+.... ...+
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~------g~~~~V~li~~~~~~~y~~~--------~l---~~~~~~g~------~~~~ 58 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAE------GFEGRISLIGDEPHLPYDRP--------SL---SKAVLDGS------LERP 58 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEEECSSSSSBCSG--------GG---GTHHHHTS------SSSC
T ss_pred CCCEEEEcccHHHHHHHHHHHcc------CcCCeEEEEECCCCCCcCCc--------cc---cHHHhCCC------CCHH
Confidence 35899999999999999999998 776 999999876543110 00 00000000 0000
Q ss_pred cEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccc
Q 007716 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (592)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~ 264 (592)
. + + . ..+..++.|++++.+++|+.+..+. . .|.+.+
T Consensus 59 ~---------~-~------------~-------~~~~~~~~~i~~~~~~~v~~id~~~-~---~v~~~~----------- 94 (410)
T 3ef6_A 59 P---------I-L------------A-------EADWYGEARIDMLTGPEVTALDVQT-R---TISLDD----------- 94 (410)
T ss_dssp C---------B-S------------S-------CTTHHHHTTCEEEESCCEEEEETTT-T---EEEETT-----------
T ss_pred H---------h-c------------C-------CHHHHHHCCCEEEeCCEEEEEECCC-C---EEEECC-----------
Confidence 0 0 0 0 0122345799999999999987654 2 356654
Q ss_pred ccccceEEEcCEEEEecCCCCc
Q 007716 265 NFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 265 ~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++.+|.+|+|+|+++.
T Consensus 95 ----g~~~~~d~lvlAtG~~p~ 112 (410)
T 3ef6_A 95 ----GTTLSADAIVIATGSRAR 112 (410)
T ss_dssp ----SCEEECSEEEECCCEEEC
T ss_pred ----CCEEECCEEEEccCCccc
Confidence 578999999999997643
No 171
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.57 E-value=1.7e-07 Score=104.12 Aligned_cols=53 Identities=17% Similarity=0.409 Sum_probs=42.5
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCC-C-------CCCCcccccCccChHHH
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKG-A-------EVGAHIISGNVFEPRAL 163 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~-~-------~~g~~~~~g~~i~~~~l 163 (592)
...+||+||||||||++||+.|++. |++|+|+|+. + .+|+.+.+.+|++.+.+
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~------g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l 165 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKY------GAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLM 165 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHT------TCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHH
T ss_pred cccccEEEECCCccHHHHHHHHHhC------CCeEEEEeccCCcccccccccCceEeccCCCchHHH
Confidence 3569999999999999999999999 9999999973 2 25666666666665544
No 172
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.56 E-value=5.4e-08 Score=104.39 Aligned_cols=39 Identities=36% Similarity=0.592 Sum_probs=36.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCC
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGA 150 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~ 150 (592)
..+||+|||||||||++|..|++. |++|+|||+.+.+|+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~------G~~V~v~e~~~~~GG 159 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK------GYEVHVYDRYDRMGG 159 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH------TCCEEEECSSSSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC------CCeEEEEeccCCCCC
Confidence 468999999999999999999999 999999999987776
No 173
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.56 E-value=6.8e-07 Score=94.62 Aligned_cols=111 Identities=24% Similarity=0.321 Sum_probs=88.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
...|+|||+|..|+.+|..|++. |.+|+++|+.+.+-...
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtvv~~~~~~l~~~---------------------------------- 191 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKF------GVNVTLLEALPRVLARV---------------------------------- 191 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSTTTTT----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhc------CCeEEEEecCCchhhhh----------------------------------
Confidence 45799999999999999999999 99999999877532100
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
+ ...+.+.+.+.+++.||++++++.|+++..++ +.+.+|.+.+
T Consensus 192 ----------~-------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~~v~l~d------------- 234 (415)
T 3lxd_A 192 ----------A-------------GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDG-TKVTGVRMQD------------- 234 (415)
T ss_dssp ----------S-------------CHHHHHHHHHHHHHTTCEEEETCCEEEEEESS-SBEEEEEESS-------------
T ss_pred ----------c-------------CHHHHHHHHHHHHhCCCEEEECCEEEEEEecC-CcEEEEEeCC-------------
Confidence 0 03666778888888999999999999998765 6777888876
Q ss_pred ccceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 007716 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~ 298 (592)
|.++.||.||+|+|..+.. .+.+..++.
T Consensus 235 --G~~i~aD~Vv~a~G~~p~~--~l~~~~gl~ 262 (415)
T 3lxd_A 235 --GSVIPADIVIVGIGIVPCV--GALISAGAS 262 (415)
T ss_dssp --SCEEECSEEEECSCCEESC--HHHHHTTCC
T ss_pred --CCEEEcCEEEECCCCccCh--HHHHhCCCC
Confidence 6789999999999998864 345556665
No 174
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.56 E-value=6.9e-08 Score=103.57 Aligned_cols=118 Identities=12% Similarity=0.095 Sum_probs=72.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcEE
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~~ 187 (592)
+||+|||||++|+++|..|++. .+|.+|+|||+...++... ..+ +.+... ... .
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~----~~g~~V~lie~~~~~~~~~--------~~~----~~~~~g--~~~-~------- 54 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIAD----HPDADVTAYEMNDNISFLS--------CGI----ALYLGK--EIK-N------- 54 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CTTCEEEEEESSSCCCBCG--------GGH----HHHHTT--CBG-G-------
T ss_pred CeEEEECCCHHHHHHHHHHHhh----CcCCcEEEEECCCCCCccc--------ccc----hhhhcC--Ccc-c-------
Confidence 5899999999999999999986 3589999999987654311 011 111000 000 0
Q ss_pred EeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccc
Q 007716 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (592)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~ 267 (592)
+... .+...+.+.+++.|++++.+++|..+..++ +.+ .+... .+|+
T Consensus 55 -------~~~~--------------~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~-~~v-~v~~~-----~~g~------ 100 (452)
T 2cdu_A 55 -------NDPR--------------GLFYSSPEELSNLGANVQMRHQVTNVDPET-KTI-KVKDL-----ITNE------ 100 (452)
T ss_dssp -------GCGG--------------GGBSCCHHHHHHTTCEEEESEEEEEEEGGG-TEE-EEEET-----TTCC------
T ss_pred -------CCHH--------------HhhhcCHHHHHHcCCEEEeCCEEEEEEcCC-CEE-EEEec-----CCCc------
Confidence 0000 000011233456799999999999887655 333 33321 1121
Q ss_pred cceEEEcCEEEEecCCCCc
Q 007716 268 RGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 268 ~g~~i~a~~vI~A~G~~s~ 286 (592)
+.++.+|.+|+|+|.++.
T Consensus 101 -~~~~~~d~lviAtGs~p~ 118 (452)
T 2cdu_A 101 -EKTEAYDKLIMTTGSKPT 118 (452)
T ss_dssp -EEEEECSEEEECCCEEEC
T ss_pred -eEEEECCEEEEccCCCcC
Confidence 368999999999997654
No 175
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.55 E-value=3.2e-08 Score=105.52 Aligned_cols=108 Identities=25% Similarity=0.409 Sum_probs=68.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
...|||||||+||+++|..|++. .++++|+|||+.+..... | .+.++...... .+.+
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~----~~~~~VtlI~~~~~~~~~--------p-~l~~v~~g~~~----------~~~i 58 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNL----MPDLKITLISDRPYFGFT--------P-AFPHLAMGWRK----------FEDI 58 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHH----CTTCEEEEECSSSEEECG--------G-GHHHHHHTCSC----------GGGS
T ss_pred CCcEEEECCCHHHHHHHHHHhcc----CcCCeEEEEcCCCCCccC--------c-cHHHHhcCCCC----------HHHh
Confidence 34699999999999999999987 346899999988642211 1 11111100000 0000
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+ +.+.+++.||+++.+ +|++|+.++ . .|++.+
T Consensus 59 ---------------------~~~-------~~~~~~~~gv~~i~~-~v~~Id~~~-~---~V~~~~------------- 92 (430)
T 3hyw_A 59 ---------------------SVP-------LAPLLPKFNIEFINE-KAESIDPDA-N---TVTTQS------------- 92 (430)
T ss_dssp ---------------------EEE-------STTTGGGGTEEEECS-CEEEEETTT-T---EEEETT-------------
T ss_pred ---------------------hhc-------HHHHHHHCCcEEEEe-EEEEEECCC-C---EEEECC-------------
Confidence 000 112234468999877 688887655 2 366665
Q ss_pred ccceEEEcCEEEEecCCCC
Q 007716 267 QRGVELRGRITLLAEGCRG 285 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s 285 (592)
|.++.+|++|+|+|++.
T Consensus 93 --g~~i~YD~LViAtG~~~ 109 (430)
T 3hyw_A 93 --GKKIEYDYLVIATGPKL 109 (430)
T ss_dssp --CCEEECSEEEECCCCEE
T ss_pred --CCEEECCEEEEeCCCCc
Confidence 67899999999999853
No 176
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.55 E-value=5.5e-07 Score=94.29 Aligned_cols=110 Identities=21% Similarity=0.176 Sum_probs=85.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
..+|+|||||+.|+.+|..|++. |.+|+|+|+.+.+... .
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~~------------------~---------------- 184 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSG------GYQLDVVAPCEQVMPG------------------L---------------- 184 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSSTT------------------T----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCeEEEEecCcchhhc------------------c----------------
Confidence 46799999999999999999999 9999999987643220 0
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
+ ...+.+.|.+.+++.||++++++.|+++..+++ . +.|.+.+
T Consensus 185 ----------~-------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~-~~v~~~~------------- 226 (384)
T 2v3a_A 185 ----------L-------------HPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGE-G-LEAHLSD------------- 226 (384)
T ss_dssp ----------S-------------CHHHHHHHHHHHHTTTCEEEESCCEEEEEEETT-E-EEEEETT-------------
T ss_pred ----------c-------------CHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCC-E-EEEEECC-------------
Confidence 0 035667778888889999999999999987653 2 3566654
Q ss_pred ccceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 007716 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~ 298 (592)
|.++.+|.||+|+|.++... +.+..++.
T Consensus 227 --g~~i~~d~vv~a~G~~p~~~--l~~~~g~~ 254 (384)
T 2v3a_A 227 --GEVIPCDLVVSAVGLRPRTE--LAFAAGLA 254 (384)
T ss_dssp --SCEEEESEEEECSCEEECCH--HHHHTTCC
T ss_pred --CCEEECCEEEECcCCCcCHH--HHHHCCCC
Confidence 57899999999999988753 45555655
No 177
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.54 E-value=6.7e-08 Score=103.51 Aligned_cols=38 Identities=26% Similarity=0.401 Sum_probs=33.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG 149 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g 149 (592)
+||||||||+||+++|..|++. .+|.+|+|||+.+..+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~----~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNL----HPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH----CTTSEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHh----CcCCeEEEEECCCccC
Confidence 4899999999999999999986 3489999999987654
No 178
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.54 E-value=1e-07 Score=103.04 Aligned_cols=38 Identities=32% Similarity=0.516 Sum_probs=33.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG 149 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g 149 (592)
+||||||||+||+++|+.|++. ++|.+|+|||+.+..+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~----~~g~~V~lie~~~~~~ 74 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRN----DENANVVTLEKGEIYS 74 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CTTCEEEEECSSSCCS
T ss_pred ceEEEECCCHHHHHHHHHHHhh----CcCCcEEEEECCCCCC
Confidence 6999999999999999999985 2389999999987654
No 179
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.52 E-value=3.6e-08 Score=104.28 Aligned_cols=110 Identities=18% Similarity=0.145 Sum_probs=69.7
Q ss_pred ccEEEECCCHHHHHHHHHHHH---hhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQ---LCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~---~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~ 184 (592)
.||||||||++|+++|+.|++ . |.+|+|||+.+..+... .+. .
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~------g~~V~vie~~~~~~~~~----~~~------------~------------ 47 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGS------KADVKVINKSRFSYFRP----ALP------------H------------ 47 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGG------GSEEEEEESSSEEEECC----SSC------------C------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCC------CCeEEEEeCCCCceecc----chh------------h------------
Confidence 479999999999999999999 6 99999999987432110 000 0
Q ss_pred cEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccc
Q 007716 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (592)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~ 264 (592)
. .........+. ..+.+.+++.|++++.+ +|+.+..++ . .|++.+ .+++
T Consensus 48 ---~---------~~~~~~~~~~~-------~~~~~~~~~~gv~~~~~-~v~~i~~~~-~---~V~~~~----g~~~--- 96 (409)
T 3h8l_A 48 ---V---------AIGVRDVDELK-------VDLSEALPEKGIQFQEG-TVEKIDAKS-S---MVYYTK----PDGS--- 96 (409)
T ss_dssp ---C---------CSSCCCCCCEE-------EEHHHHTGGGTCEEEEC-EEEEEETTT-T---EEEEEC----TTSC---
T ss_pred ---c---------ccCCcCHHHHH-------HHHHHHHhhCCeEEEEe-eEEEEeCCC-C---EEEEcc----CCcc---
Confidence 0 00000001111 12444555679999988 888887654 2 244443 1111
Q ss_pred ccccceEEEcCEEEEecCCCCc
Q 007716 265 NFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 265 ~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
..++.+|.||+|+|.++.
T Consensus 97 ----~~~~~~d~lViAtG~~~~ 114 (409)
T 3h8l_A 97 ----MAEEEYDYVIVGIGAHLA 114 (409)
T ss_dssp ----EEEEECSEEEECCCCEEC
T ss_pred ----cceeeCCEEEECCCCCcC
Confidence 146999999999998654
No 180
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.50 E-value=9.4e-07 Score=94.11 Aligned_cols=112 Identities=20% Similarity=0.288 Sum_probs=86.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||||+.|+.+|..|++. |.+|+|+|+.+.+.... ++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~------G~~Vtlv~~~~~~l~~~-----~~--------------------------- 190 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKA------NMHVTLLDTAARVLERV-----TA--------------------------- 190 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSTTTTT-----SC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCEEEEEEeCCccccch-----hh---------------------------
Confidence 35799999999999999999999 99999999876432100 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEc-CCCcEEEEEeccCcccCCCCcccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYD-ADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~-~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
..+.+.+.+.+++.||++++++.|+++..+ +++.+.+|.+.+
T Consensus 191 -------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~------------ 233 (431)
T 1q1r_A 191 -------------------------PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCED------------ 233 (431)
T ss_dssp -------------------------HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETT------------
T ss_pred -------------------------HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCC------------
Confidence 255666778888899999999999999862 235666787765
Q ss_pred cccceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 007716 266 FQRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~ 298 (592)
|.++.+|.||+|+|.++.. .+.+..++.
T Consensus 234 ---G~~i~~D~Vv~a~G~~p~~--~l~~~~gl~ 261 (431)
T 1q1r_A 234 ---GTRLPADLVIAGIGLIPNC--ELASAAGLQ 261 (431)
T ss_dssp ---SCEEECSEEEECCCEEECC--HHHHHTTCC
T ss_pred ---CCEEEcCEEEECCCCCcCc--chhhccCCC
Confidence 6789999999999988764 355566665
No 181
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.49 E-value=1.7e-07 Score=103.42 Aligned_cols=117 Identities=21% Similarity=0.216 Sum_probs=72.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcEE
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~~ 187 (592)
.||+|||||+||+++|..|++. +++.+|+|||+.+..+.. +-.+ +.+....
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~----~~~~~V~lie~~~~~~~~--------~~~l----~~~~~~~------------- 52 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL----SETAEIIMFERGEYVSFA--------NCGL----PYHISGE------------- 52 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH----CSSSEEEEECSSSCSSBC--------GGGH----HHHHTSS-------------
T ss_pred CcEEEECCCHHHHHHHHHHHhh----CcCCCEEEEECCCCcccc--------ccCc----hHHhcCC-------------
Confidence 4799999999999999999987 457899999999876531 1111 1110000
Q ss_pred EeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccc
Q 007716 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (592)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~ 267 (592)
... ....+.+.+...+++.|++++++++|+++..++ +.+ .+... .+|+
T Consensus 53 ---------~~~----------~~~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~-~~v-~~~~~-----~~g~------ 100 (565)
T 3ntd_A 53 ---------IAQ----------RSALVLQTPESFKARFNVEVRVKHEVVAIDRAA-KLV-TVRRL-----LDGS------ 100 (565)
T ss_dssp ---------SCC----------GGGGBCCCHHHHHHHHCCEEETTEEEEEEETTT-TEE-EEEET-----TTCC------
T ss_pred ---------cCC----------hHHhhccCHHHHHHhcCcEEEECCEEEEEECCC-CEE-EEEec-----CCCC------
Confidence 000 000111122333445799999999999997655 332 33321 1122
Q ss_pred cceEEEcCEEEEecCCCCc
Q 007716 268 RGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 268 ~g~~i~a~~vI~A~G~~s~ 286 (592)
..++.+|.||+|+|+++.
T Consensus 101 -~~~~~~d~lviAtG~~p~ 118 (565)
T 3ntd_A 101 -EYQESYDTLLLSPGAAPI 118 (565)
T ss_dssp -EEEEECSEEEECCCEEEC
T ss_pred -eEEEECCEEEECCCCCCC
Confidence 258999999999998643
No 182
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.48 E-value=7.2e-07 Score=95.56 Aligned_cols=101 Identities=16% Similarity=0.141 Sum_probs=79.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||||+.|+.+|..|++. |.+|+|+|+.+.+... ++
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------~~--------------------------- 207 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGL------GAKTHLFEMFDAPLPS------FD--------------------------- 207 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT------SC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhc------CCEEEEEEeCCchhhh------hh---------------------------
Confidence 35799999999999999999999 9999999987643210 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+.+.|.+.+++.||++++++.|+++..++++.+ .|.+.+
T Consensus 208 -------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~------------- 248 (450)
T 1ges_A 208 -------------------------PMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSL-TLELED------------- 248 (450)
T ss_dssp -------------------------HHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCE-EEEETT-------------
T ss_pred -------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEE-EEEECC-------------
Confidence 24566677778888999999999999987654433 566654
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 007716 267 QRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~v 287 (592)
|.++.+|.||+|+|.++.+
T Consensus 249 --g~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 249 --GRSETVDCLIWAIGREPAN 267 (450)
T ss_dssp --SCEEEESEEEECSCEEESC
T ss_pred --CcEEEcCEEEECCCCCcCC
Confidence 5689999999999988764
No 183
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.47 E-value=9.4e-08 Score=102.06 Aligned_cols=116 Identities=16% Similarity=0.236 Sum_probs=69.3
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcEEE
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFWF 188 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~ 188 (592)
+||||||||||++||..|+++ +++.+|+|||+.+..... ..+ + +.+..... .
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~----g~~~~V~lie~~~~~~~~---~~~-----l----~~~~~~~~------~------ 53 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL----DKESDIIIFEKDRDMSFA---NCA-----L----PYVIGEVV------E------ 53 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH----CSSSCEEEEESSSCSSBC---GGG-----H----HHHHTTSS------C------
T ss_pred eEEEECCCHHHHHHHHHHHhC----CCCCcEEEEeCCCCCCCC---cch-----h----HHHHcCCc------c------
Confidence 599999999999999999998 223689999998754321 111 1 11110000 0
Q ss_pred eecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccccc
Q 007716 189 LTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQR 268 (592)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~ 268 (592)
.....+ .... .+..++.|++++.+++|+.+..+. . ...+.... ++ +
T Consensus 54 ---~~~~~~----------~~~~-------~~~~~~~~i~~~~~~~V~~id~~~-~-~~~~~~~~-----~~-------~ 99 (437)
T 4eqs_A 54 ---DRRYAL----------AYTP-------EKFYDRKQITVKTYHEVIAINDER-Q-TVSVLNRK-----TN-------E 99 (437)
T ss_dssp ---CGGGTB----------CCCH-------HHHHHHHCCEEEETEEEEEEETTT-T-EEEEEETT-----TT-------E
T ss_pred ---chhhhh----------hcCH-------HHHHHhcCCEEEeCCeEEEEEccC-c-EEEEEecc-----CC-------c
Confidence 000000 0011 122345789999999999987654 2 22333321 11 2
Q ss_pred ceEEEcCEEEEecCCCCc
Q 007716 269 GVELRGRITLLAEGCRGS 286 (592)
Q Consensus 269 g~~i~a~~vI~A~G~~s~ 286 (592)
+.++.+|.+|+|+|+++.
T Consensus 100 ~~~~~yd~lVIATGs~p~ 117 (437)
T 4eqs_A 100 QFEESYDKLILSPGASAN 117 (437)
T ss_dssp EEEEECSEEEECCCEEEC
T ss_pred eEEEEcCEEEECCCCccc
Confidence 468999999999998754
No 184
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.47 E-value=9.7e-08 Score=100.84 Aligned_cols=107 Identities=19% Similarity=0.242 Sum_probs=69.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCC--cEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~--~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
.||||||||+||+++|..|++. |. +|+|||+.+..+.... . +...+...
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~------g~~~~V~lie~~~~~~y~~~-------~----l~~~~l~~------------ 52 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQA------KYPGRIALINDEKHLPYQRP-------P----LSKAYLKS------------ 52 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCSCEEEECCSSSSSBCSG-------G----GGTGGGGS------------
T ss_pred CCEEEEcChHHHHHHHHHHHhh------CcCCCEEEEeCCCCCCCCCc-------c----CCHHHHCC------------
Confidence 5799999999999999999998 77 8999999875443110 0 00000000
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
... +. .+.....+...+.|++++. .+|+.+..+. . .|.+.+
T Consensus 53 ------~~~---~~-------------~~~~~~~~~~~~~~i~~~~-~~v~~id~~~-~---~v~~~~------------ 93 (404)
T 3fg2_P 53 ------GGD---PN-------------SLMFRPEKFFQDQAIELIS-DRMVSIDREG-R---KLLLAS------------ 93 (404)
T ss_dssp ------CCC---TT-------------SSBSSCHHHHHHTTEEEEC-CCEEEEETTT-T---EEEESS------------
T ss_pred ------CCC---HH-------------HccCCCHHHHHhCCCEEEE-EEEEEEECCC-C---EEEECC------------
Confidence 000 00 0000112334457999998 8898887654 2 356654
Q ss_pred cccceEEEcCEEEEecCCCC
Q 007716 266 FQRGVELRGRITLLAEGCRG 285 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s 285 (592)
|.++.+|.+|+|+|..+
T Consensus 94 ---g~~~~~d~lvlAtG~~p 110 (404)
T 3fg2_P 94 ---GTAIEYGHLVLATGARN 110 (404)
T ss_dssp ---SCEEECSEEEECCCEEE
T ss_pred ---CCEEECCEEEEeeCCCc
Confidence 57899999999999754
No 185
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.47 E-value=6.8e-07 Score=101.66 Aligned_cols=40 Identities=40% Similarity=0.692 Sum_probs=36.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH 151 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~ 151 (592)
..+||+|||||++||++|+.|++. |++|+|+|+...+|+.
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~------g~~v~v~E~~~~~ggr 374 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNF------GIKVTVLEAKDRIGGR 374 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSSSSCTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC------CCcEEEEecccceece
Confidence 358999999999999999999999 9999999998888773
No 186
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.46 E-value=7.7e-07 Score=95.40 Aligned_cols=100 Identities=20% Similarity=0.250 Sum_probs=78.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
..+|+|||||++|+.+|..|++. |.+|+|+|+.+.+... .
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~------g~~V~lv~~~~~~l~~------~---------------------------- 206 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRL------GAEVIVLEYMDRILPT------M---------------------------- 206 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTT------S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCEEEEEecCCccccc------c----------------------------
Confidence 35799999999999999999998 9999999987643210 0
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
...+.+.|.+.+++.||+++++++|+++..+++ .+ .|.+.+
T Consensus 207 ------------------------~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~-~v-~v~~~~------------- 247 (455)
T 2yqu_A 207 ------------------------DLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAK-GA-RVELEG------------- 247 (455)
T ss_dssp ------------------------CHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT-EE-EEEETT-------------
T ss_pred ------------------------CHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC-EE-EEEECC-------------
Confidence 035566677778888999999999999987653 23 455544
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 007716 267 QRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~v 287 (592)
|.++.+|.||+|+|.++..
T Consensus 248 --g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 248 --GEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp --SCEEEESEEEECSCEEECC
T ss_pred --CeEEEcCEEEECcCCCcCC
Confidence 5789999999999998764
No 187
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.44 E-value=2.3e-07 Score=100.58 Aligned_cols=115 Identities=25% Similarity=0.330 Sum_probs=76.3
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCC
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~ 184 (592)
...+||+|||||++|+++|+.|++. .+|+|||+.+.+|+...... .
T Consensus 106 ~~~~dVvIIGgG~aGl~aA~~L~~~-------~~V~vie~~~~~GG~~~~~~---------------~------------ 151 (493)
T 1y56_A 106 RVVVDVAIIGGGPAGIGAALELQQY-------LTVALIEERGWLGGDMWLKG---------------I------------ 151 (493)
T ss_dssp EEEESCCEECCSHHHHHHHHHHTTT-------CCEEEECTTSSSSCSGGGTC---------------S------------
T ss_pred cccCCEEEECccHHHHHHHHHHHhc-------CCEEEEeCCCCCCCeeeccc---------------c------------
Confidence 3468999999999999999999873 78999999988776422100 0
Q ss_pred cEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccc
Q 007716 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (592)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~ 264 (592)
.. ..+ .. ...++...+.+++ +.|++++.++.|.++..+++ .+..+...+ |+
T Consensus 152 --~~------~g~--------~~--~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~~~-~~~~~~~~~------~~--- 202 (493)
T 1y56_A 152 --KQ------EGF--------NK--DSRKVVEELVGKL-NENTKIYLETSALGVFDKGE-YFLVPVVRG------DK--- 202 (493)
T ss_dssp --EE------TTT--------TE--EHHHHHHHHHHTC-CTTEEEETTEEECCCEECSS-SEEEEEEET------TE---
T ss_pred --cc------CCC--------CC--CHHHHHHHHHHHH-hcCCEEEcCCEEEEEEcCCc-EEEEEEecC------Ce---
Confidence 00 000 01 2345556665555 56899999999988877653 332222121 11
Q ss_pred ccccceEEEcCEEEEecCCCCc
Q 007716 265 NFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 265 ~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
-.++.+|.+|+|+|+...
T Consensus 203 ----~~~~~~d~lvlAtGa~~~ 220 (493)
T 1y56_A 203 ----LIEILAKRVVLATGAIDS 220 (493)
T ss_dssp ----EEEEEESCEEECCCEEEC
T ss_pred ----EEEEECCEEEECCCCCcc
Confidence 137899999999998653
No 188
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.43 E-value=1e-06 Score=95.12 Aligned_cols=102 Identities=19% Similarity=0.188 Sum_probs=80.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||||..|+.+|..|++. |.+|+++|+.+.+... ++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~l~~------~d--------------------------- 225 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGL------GSETHLVIRGETVLRK------FD--------------------------- 225 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHT------TCEEEEECSSSSSCTT------SC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCceEEEEeCCccccc------cC---------------------------
Confidence 35799999999999999999999 9999999987643210 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+.+.+.+.+++.||++++++.|+++..++++.++.|.+.+
T Consensus 226 -------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~------------- 267 (479)
T 2hqm_A 226 -------------------------ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMND------------- 267 (479)
T ss_dssp -------------------------HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETT-------------
T ss_pred -------------------------HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECC-------------
Confidence 245566777778889999999999999876545344677665
Q ss_pred ccc-eEEEcCEEEEecCCCCcc
Q 007716 267 QRG-VELRGRITLLAEGCRGSL 287 (592)
Q Consensus 267 ~~g-~~i~a~~vI~A~G~~s~v 287 (592)
| .++.+|.||+|+|.++..
T Consensus 268 --G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 268 --SKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp --SCEEEEESEEEECSCEEECC
T ss_pred --CcEEEEcCEEEECCCCCCcc
Confidence 5 689999999999987764
No 189
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.41 E-value=7.8e-07 Score=95.13 Aligned_cols=101 Identities=20% Similarity=0.207 Sum_probs=79.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
...+|+|||||++|+.+|..|++. |.+|+|+|+.+.+....
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~~--------------------------------- 188 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKA------GKKVTVIDILDRPLGVY--------------------------------- 188 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSTTTTT---------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC------CCeEEEEecCccccccc---------------------------------
Confidence 357899999999999999999999 99999999876432100
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
+ ...+.+.+.+.+++.||++++++.|+++..+ +.+..|.+.
T Consensus 189 -----------~-------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~v~~v~~~------------- 229 (447)
T 1nhp_A 189 -----------L-------------DKEFTDVLTEEMEANNITIATGETVERYEGD--GRVQKVVTD------------- 229 (447)
T ss_dssp -----------C-------------CHHHHHHHHHHHHTTTEEEEESCCEEEEECS--SBCCEEEES-------------
T ss_pred -----------C-------------CHHHHHHHHHHHHhCCCEEEcCCEEEEEEcc--CcEEEEEEC-------------
Confidence 0 0356677888888899999999999998754 334345553
Q ss_pred cccceEEEcCEEEEecCCCCcc
Q 007716 266 FQRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~v 287 (592)
|.++.+|.||+|+|.++..
T Consensus 230 ---~~~i~~d~vi~a~G~~p~~ 248 (447)
T 1nhp_A 230 ---KNAYDADLVVVAVGVRPNT 248 (447)
T ss_dssp ---SCEEECSEEEECSCEEESC
T ss_pred ---CCEEECCEEEECcCCCCCh
Confidence 3679999999999988753
No 190
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.41 E-value=1.1e-06 Score=92.95 Aligned_cols=110 Identities=27% Similarity=0.405 Sum_probs=86.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
...|+|||+|..|+.+|..|++. |.+|+++|+.+.+.. +.+ .
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtvv~~~~~~l~----------~~~--------~-------------- 184 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKL------GLSVTILEAGDELLV----------RVL--------G-------------- 184 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSH----------HHH--------C--------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCeEEEEecCCccch----------hhc--------C--------------
Confidence 45799999999999999999998 999999998764321 000 0
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+.+.+.+.+++.||++++++.|+++..++ .+.+|++.|
T Consensus 185 -------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~~~v~~~d------------- 224 (410)
T 3ef6_A 185 -------------------------RRIGAWLRGLLTELGVQVELGTGVVGFSGEG--QLEQVMASD------------- 224 (410)
T ss_dssp -------------------------HHHHHHHHHHHHHHTCEEECSCCEEEEECSS--SCCEEEETT-------------
T ss_pred -------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEeccC--cEEEEEECC-------------
Confidence 3566777888888999999999999987643 455688765
Q ss_pred ccceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 007716 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~ 298 (592)
|.++.+|.||+|+|.++.. .+.+..++.
T Consensus 225 --g~~i~aD~Vv~a~G~~p~~--~l~~~~gl~ 252 (410)
T 3ef6_A 225 --GRSFVADSALICVGAEPAD--QLARQAGLA 252 (410)
T ss_dssp --SCEEECSEEEECSCEEECC--HHHHHTTCC
T ss_pred --CCEEEcCEEEEeeCCeecH--HHHHhCCCc
Confidence 6789999999999998864 355566766
No 191
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.39 E-value=1.8e-06 Score=93.21 Aligned_cols=107 Identities=21% Similarity=0.304 Sum_probs=80.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-+|+|||||+.|+.+|..|++. |.+|+|+|+.+.+... ++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------~~--------------------------- 223 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRL------GSKVTVVEFQPQIGAS------MD--------------------------- 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSSS------SC---------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHc------CCEEEEEEeCCccccc------cC---------------------------
Confidence 45799999999999999999999 9999999988754320 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+.+.+.+.+++.||++++++.|+++..++++..+.|.+.+ ..+|
T Consensus 224 -------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~---~~~g------ 269 (478)
T 1v59_A 224 -------------------------GEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVED---TKTN------ 269 (478)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEE---TTTT------
T ss_pred -------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEE---cCCC------
Confidence 356667788888899999999999999863123334565542 0112
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 007716 267 QRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~v 287 (592)
++.++.+|.||+|+|.++..
T Consensus 270 -~~~~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 270 -KQENLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp -EEEEEEESEEEECSCEEECC
T ss_pred -CceEEECCEEEECCCCCcCC
Confidence 14789999999999988764
No 192
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.38 E-value=1.6e-06 Score=93.25 Aligned_cols=99 Identities=24% Similarity=0.237 Sum_probs=78.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcEE
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~~ 187 (592)
-.|+|||||..|+.+|..|++. |.+|+|+|+.+.+... ++
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~------G~~Vtlv~~~~~~l~~------~~---------------------------- 206 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSF------GSEVTVVALEDRLLFQ------FD---------------------------- 206 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT------SC----------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhc------CCEEEEEEcCCccccc------cC----------------------------
Confidence 4799999999999999999999 9999999987643210 00
Q ss_pred EeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccc
Q 007716 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (592)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~ 267 (592)
..+.+.+.+.+++.||++++++.|+++..++++ ..|.+.+
T Consensus 207 ------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~-------------- 246 (463)
T 2r9z_A 207 ------------------------PLLSATLAENMHAQGIETHLEFAVAALERDAQG--TTLVAQD-------------- 246 (463)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEESSCCEEEEEEETTE--EEEEETT--------------
T ss_pred ------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe--EEEEEeC--------------
Confidence 244556777788899999999999999876543 3566654
Q ss_pred cce-EEEcCEEEEecCCCCcc
Q 007716 268 RGV-ELRGRITLLAEGCRGSL 287 (592)
Q Consensus 268 ~g~-~i~a~~vI~A~G~~s~v 287 (592)
|. ++.+|.||+|+|.++.+
T Consensus 247 -G~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 247 -GTRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp -CCEEEEESEEEECSCEEESC
T ss_pred -CcEEEEcCEEEECCCCCcCC
Confidence 56 79999999999988764
No 193
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.37 E-value=2.3e-07 Score=100.57 Aligned_cols=41 Identities=20% Similarity=0.346 Sum_probs=34.8
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCC
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG 149 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g 149 (592)
...+||||||||+||++||..|++. .++.+|+|||+.+..+
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~----~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRAR----DPGARVLIVSEDPELP 49 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHH----STTCEEEEEESSSSCC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhc----CCCCeEEEEeCCCCCC
Confidence 3468999999999999999998775 3488999999987654
No 194
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.35 E-value=2.9e-06 Score=89.60 Aligned_cols=106 Identities=19% Similarity=0.281 Sum_probs=82.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
...|+|||||..|+.+|..|++. |.+|+++|+.+.+.... +
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~~-----~---------------------------- 185 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTA------GVHVSLVETQPRLMSRA-----A---------------------------- 185 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSSTTT-----S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCEEEEEEeCCcccccc-----c----------------------------
Confidence 35799999999999999999999 99999999887432100 0
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
+ ..+.+.+.+.+++.||++++++.|+++. + + .|++.+
T Consensus 186 -----------~-------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~---~v~~~~------------- 222 (408)
T 2gqw_A 186 -----------P-------------ATLADFVARYHAAQGVDLRFERSVTGSV-D--G---VVLLDD------------- 222 (408)
T ss_dssp -----------C-------------HHHHHHHHHHHHHTTCEEEESCCEEEEE-T--T---EEEETT-------------
T ss_pred -----------C-------------HHHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C---EEEECC-------------
Confidence 0 2556677788888999999999999987 3 3 466654
Q ss_pred ccceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 007716 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~ 298 (592)
|.++.+|.||.|+|.++.. .+.+..++.
T Consensus 223 --g~~i~~D~vi~a~G~~p~~--~l~~~~gl~ 250 (408)
T 2gqw_A 223 --GTRIAADMVVVGIGVLAND--ALARAAGLA 250 (408)
T ss_dssp --SCEEECSEEEECSCEEECC--HHHHHHTCC
T ss_pred --CCEEEcCEEEECcCCCccH--HHHHhCCCC
Confidence 5789999999999998764 255556665
No 195
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.35 E-value=3.2e-06 Score=91.71 Aligned_cols=101 Identities=17% Similarity=0.213 Sum_probs=79.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||||+.|+.+|..|++. |.+|+|+|+.+.+... ++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~l~~------~d--------------------------- 216 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRL------GIDSYIFARGNRILRK------FD--------------------------- 216 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSSSSCTT------SC---------------------------
T ss_pred CCeEEEECChHHHHHHHHHHHHc------CCeEEEEecCCccCcc------cc---------------------------
Confidence 35799999999999999999999 9999999987643210 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+.+.+.+.+++.||++++++.|+++..++++.+ .|.+.+
T Consensus 217 -------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~-~v~~~~------------- 257 (500)
T 1onf_A 217 -------------------------ESVINVLENDMKKNNINIVTFADVVEIKKVSDKNL-SIHLSD------------- 257 (500)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCE-EEEETT-------------
T ss_pred -------------------------hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceE-EEEECC-------------
Confidence 25566677888889999999999999987654433 566654
Q ss_pred ccceE-EEcCEEEEecCCCCcc
Q 007716 267 QRGVE-LRGRITLLAEGCRGSL 287 (592)
Q Consensus 267 ~~g~~-i~a~~vI~A~G~~s~v 287 (592)
|.+ +.+|.||.|+|..+..
T Consensus 258 --g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 258 --GRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp --SCEEEEESEEEECCCBCCTT
T ss_pred --CcEEEECCEEEECCCCCcCC
Confidence 456 9999999999988763
No 196
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.34 E-value=2.3e-06 Score=91.95 Aligned_cols=105 Identities=17% Similarity=0.193 Sum_probs=79.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-+|+|||||+.|+.+|..|++. |.+|+|+|+.+.+... .
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------------------~---------------- 208 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRL------GAEVTLIEYMPEILPQ------------------G---------------- 208 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT------------------S----------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCeEEEEEcCCccccc------------------c----------------
Confidence 35799999999999999999998 9999999987643210 0
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
...+.+.+.+.+++.||++++++.|+++..++ +.+ .|.+.+ +.+|+.
T Consensus 209 ------------------------~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~-~~~-~v~~~~---~~~g~~---- 255 (464)
T 2eq6_A 209 ------------------------DPETAALLRRALEKEGIRVRTKTKAVGYEKKK-DGL-HVRLEP---AEGGEG---- 255 (464)
T ss_dssp ------------------------CHHHHHHHHHHHHHTTCEEECSEEEEEEEEET-TEE-EEEEEE---TTCCSC----
T ss_pred ------------------------CHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC-CEE-EEEEee---cCCCce----
Confidence 03556677788888999999999999998765 333 455531 011321
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 007716 267 QRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~v 287 (592)
.++.+|.||+|+|.++.+
T Consensus 256 ---~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 256 ---EEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp ---EEEEESEEEECSCEEESC
T ss_pred ---eEEEcCEEEECCCcccCC
Confidence 389999999999998865
No 197
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.34 E-value=5.6e-07 Score=94.65 Aligned_cols=35 Identities=31% Similarity=0.516 Sum_probs=30.6
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
.|||||||+||+++|..|++. +++.+|+|||+.+.
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~----~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLA----DPSIEVTLIEPNET 38 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHH----CTTSEEEEECSCSS
T ss_pred EEEEECCcHHHHHHHHHHHhc----CcCCeEEEEeCCCC
Confidence 599999999999999999887 34579999998764
No 198
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.33 E-value=4.3e-07 Score=102.32 Aligned_cols=40 Identities=33% Similarity=0.542 Sum_probs=36.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH 151 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~ 151 (592)
..+||+|||||+||+++|+.|++. |++|+|||+.+.+|+.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~------g~~V~lie~~~~~gg~ 411 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAAR------GHQVTLFDAHSEIGGQ 411 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT------TCEEEEEESSSSSCTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCCCCCCe
Confidence 468999999999999999999998 9999999999877763
No 199
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.32 E-value=2.1e-07 Score=99.90 Aligned_cols=38 Identities=29% Similarity=0.349 Sum_probs=34.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCC--CcEEEEcCCCCCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVD--LSVCVVEKGAEVGA 150 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g--~~V~vlEk~~~~g~ 150 (592)
.+||+||||||+|+++|..|++. | .+|+|||+.+.+++
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~------g~~~~V~vie~~~~~gg 45 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKH------HSRAHVDIYEKQLVPFG 45 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------CSSCEEEEECSSSSSCT
T ss_pred CceEEEECcCHHHHHHHHHHHhc------CCCCCEEEEeCCCcCCc
Confidence 57999999999999999999998 6 99999999887664
No 200
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.32 E-value=2.8e-07 Score=101.26 Aligned_cols=71 Identities=8% Similarity=0.183 Sum_probs=48.8
Q ss_pred HHHHHHHHHHcCCEEecCceEEEEEEc---CC-CcEEEEEeccCcccCCC-CcccccccceEEEc-CEEEEecCCCCcch
Q 007716 215 VRWLGGKAEELGVEIYPGFAASEILYD---AD-NKVIGIGTNDMGIAKDG-SKKENFQRGVELRG-RITLLAEGCRGSLS 288 (592)
Q Consensus 215 ~~~L~~~a~~~Gv~i~~g~~v~~i~~~---~~-g~v~~V~~~d~g~~~~G-~~~~~f~~g~~i~a-~~vI~A~G~~s~vr 288 (592)
..+|.....+.+++|++++.|++|+.+ ++ ++++||++.+ .+| +. .+++| |-||+|.|+..+
T Consensus 211 ~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~----~~g~~~-------~~v~A~kEVILsAGai~S-- 277 (566)
T 3fim_B 211 TAYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAE----QEGAPT-------TTVCAKKEVVLSAGSVGT-- 277 (566)
T ss_dssp HHTHHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEES----STTSCC-------EEEEEEEEEEECCHHHHH--
T ss_pred HHHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEE----CCCceE-------EEEEeeeEEEEecCCcCC--
Confidence 344544445568999999999999987 22 5678998865 233 32 67888 789999997653
Q ss_pred HHHHHHcCCC
Q 007716 289 EKLIKNFKLR 298 (592)
Q Consensus 289 ~~l~~~~~l~ 298 (592)
-||+...|+-
T Consensus 278 PqlL~lSGIG 287 (566)
T 3fim_B 278 PILLQLSGIG 287 (566)
T ss_dssp HHHHHHTTEE
T ss_pred hHHHHhcCCC
Confidence 4554444443
No 201
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.32 E-value=5.5e-06 Score=88.67 Aligned_cols=100 Identities=22% Similarity=0.216 Sum_probs=80.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
...|+|||||..|+.+|..|++. |.+|+++|+.+.+.... +
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~~-----~---------------------------- 187 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKM------KKTVHVFESLENLLPKY-----F---------------------------- 187 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSSTTT-----C----------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCeEEEEEccCcccccc-----C----------------------------
Confidence 35799999999999999999999 99999999876532100 0
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
+ ..+.+.+.+.+++.||++++++.|+++..++ +.+ .|.+.+
T Consensus 188 -----------d-------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v-~v~~~~------------- 228 (452)
T 3oc4_A 188 -----------D-------------KEMVAEVQKSLEKQAVIFHFEETVLGIEETA-NGI-VLETSE------------- 228 (452)
T ss_dssp -----------C-------------HHHHHHHHHHHHTTTEEEEETCCEEEEEECS-SCE-EEEESS-------------
T ss_pred -----------C-------------HHHHHHHHHHHHHcCCEEEeCCEEEEEEccC-CeE-EEEECC-------------
Confidence 0 3566778888888999999999999998665 445 677654
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 007716 267 QRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~v 287 (592)
| ++.+|.||+|+|.++..
T Consensus 229 --g-~i~aD~Vv~A~G~~p~~ 246 (452)
T 3oc4_A 229 --Q-EISCDSGIFALNLHPQL 246 (452)
T ss_dssp --C-EEEESEEEECSCCBCCC
T ss_pred --C-EEEeCEEEECcCCCCCh
Confidence 4 89999999999998764
No 202
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.31 E-value=3.2e-06 Score=90.61 Aligned_cols=103 Identities=19% Similarity=0.301 Sum_probs=78.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
..+|+|||||+.|+.+|..|++. |.+|+|+|+.+.+... ++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------~~--------------------------- 210 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANF------GTKVTILEGAGEILSG------FE--------------------------- 210 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSSTT------SC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCcEEEEEcCCccccc------cC---------------------------
Confidence 46799999999999999999999 9999999987643210 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+.+.+.+.+++.||+++++++|+++..+++ .+ .|.+.+ +|
T Consensus 211 -------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~-~v~~~~-----~g------ 252 (455)
T 1ebd_A 211 -------------------------KQMAAIIKKRLKKKGVEVVTNALAKGAEERED-GV-TVTYEA-----NG------ 252 (455)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEEESEEEEEEEEETT-EE-EEEEEE-----TT------
T ss_pred -------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC-eE-EEEEEe-----CC------
Confidence 25566677788889999999999999987653 23 344431 11
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 007716 267 QRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~v 287 (592)
++.++.+|.||+|+|.++..
T Consensus 253 -~~~~~~~D~vv~a~G~~p~~ 272 (455)
T 1ebd_A 253 -ETKTIDADYVLVTVGRRPNT 272 (455)
T ss_dssp -EEEEEEESEEEECSCEEESC
T ss_pred -ceeEEEcCEEEECcCCCccc
Confidence 14789999999999988753
No 203
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.30 E-value=3.2e-07 Score=108.07 Aligned_cols=99 Identities=31% Similarity=0.423 Sum_probs=69.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
.+||+||||||||+++|..|++. |+ +|+|||+.+.+|+....+ +|.+
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~------G~~~Vtv~E~~~~~GG~~~~~-----------ip~~--------------- 234 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARL------GYSDITIFEKQEYVGGLSTSE-----------IPQF--------------- 234 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHT------TCCCEEEEESSSSCSTHHHHT-----------SCTT---------------
T ss_pred CCEEEEECccHHHHHHHHHHHhc------CCCcEEEEeCCCCCCcccccc-----------CCcc---------------
Confidence 58999999999999999999999 99 799999988777631000 0000
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
.++ ..+..+..+.+++.||+++.++.+.. .. |++.+
T Consensus 235 ----------~~~-------------~~~~~~~~~~~~~~gv~~~~~~~v~~------~~---v~~~~------------ 270 (1025)
T 1gte_A 235 ----------RLP-------------YDVVNFEIELMKDLGVKIICGKSLSE------NE---ITLNT------------ 270 (1025)
T ss_dssp ----------TSC-------------HHHHHHHHHHHHTTTCEEEESCCBST------TS---BCHHH------------
T ss_pred ----------cCC-------------HHHHHHHHHHHHHCCcEEEcccEecc------ce---EEhhh------------
Confidence 000 23455666777889999999987621 11 23322
Q ss_pred cccceEEEcCEEEEecCCC
Q 007716 266 FQRGVELRGRITLLAEGCR 284 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~ 284 (592)
+.++.+|.||+|+|++
T Consensus 271 ---~~~~~~d~vvlAtGa~ 286 (1025)
T 1gte_A 271 ---LKEEGYKAAFIGIGLP 286 (1025)
T ss_dssp ---HHHTTCCEEEECCCCC
T ss_pred ---cCccCCCEEEEecCCC
Confidence 3456799999999984
No 204
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.30 E-value=3.1e-06 Score=90.58 Aligned_cols=101 Identities=22% Similarity=0.311 Sum_probs=79.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
...|+|||||..|+.+|..|++. |.+|+++|+.+.+.... ++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~~-----~~--------------------------- 190 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQ------NYNVNLIDGHERVLYKY-----FD--------------------------- 190 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTT------TCEEEEEESSSSTTTTT-----SC---------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHhc------CCEEEEEEcCCchhhhh-----hh---------------------------
Confidence 45799999999999999999998 99999999876432100 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+.+.+.+.+++.||+++++++|+++..++ +.+..|.+ +
T Consensus 191 -------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~v~~v~~-~------------- 230 (452)
T 2cdu_A 191 -------------------------KEFTDILAKDYEAHGVNLVLGSKVAAFEEVD-DEIITKTL-D------------- 230 (452)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEEESSCEEEEEEET-TEEEEEET-T-------------
T ss_pred -------------------------hhHHHHHHHHHHHCCCEEEcCCeeEEEEcCC-CeEEEEEe-C-------------
Confidence 3566677888888999999999999998644 55545554 3
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 007716 267 QRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~v 287 (592)
|.++.+|.||.|+|..+..
T Consensus 231 --g~~i~~D~vv~a~G~~p~~ 249 (452)
T 2cdu_A 231 --GKEIKSDIAILCIGFRPNT 249 (452)
T ss_dssp --SCEEEESEEEECCCEEECC
T ss_pred --CCEEECCEEEECcCCCCCH
Confidence 4689999999999988764
No 205
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.29 E-value=4.4e-06 Score=84.53 Aligned_cols=103 Identities=19% Similarity=0.236 Sum_probs=78.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
...|+|||+|+.|+.+|..|++. |.+|+++++.+.+.. .
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~--------~--------------------------- 183 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNI------ASEVHLIHRRDGFRA--------E--------------------------- 183 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTT------SSEEEEECSSSSCCC--------C---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhc------CCeEEEEEeCCcccc--------C---------------------------
Confidence 35799999999999999999998 999999998763211 0
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCC-CCcccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKD-GSKKEN 265 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~-G~~~~~ 265 (592)
..+.+.+.+.+++.||++++++.++++..++ +.+.+|.+.+. .+ |+
T Consensus 184 -------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~---~~~g~---- 230 (320)
T 1trb_A 184 -------------------------KILIKRLMDKVENGNIILHTNRTLEEVTGDQ-MGVTGVRLRDT---QNSDN---- 230 (320)
T ss_dssp -------------------------HHHHHHHHHHHHTSSEEEECSCEEEEEEECS-SSEEEEEEECC---TTCCC----
T ss_pred -------------------------HHHHHHHHHhcccCCeEEEcCceeEEEEcCC-CceEEEEEEec---cCCCc----
Confidence 2344556677788999999999999998765 45767777541 11 32
Q ss_pred cccceEEEcCEEEEecCCCCc
Q 007716 266 FQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~ 286 (592)
+.++.+|.||.|+|..+.
T Consensus 231 ---~~~i~~D~vv~a~G~~p~ 248 (320)
T 1trb_A 231 ---IESLDVAGLFVAIGHSPN 248 (320)
T ss_dssp ---CEEEECSEEEECSCEEES
T ss_pred ---eEEEEcCEEEEEeCCCCC
Confidence 268999999999996543
No 206
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.28 E-value=3.1e-06 Score=91.31 Aligned_cols=98 Identities=19% Similarity=0.380 Sum_probs=77.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
..+|+|||||+.|+.+|..|++. |.+|+|+|+.+.+... ++
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------~~--------------------------- 226 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVEL------GKKVRMIERNDHIGTI------YD--------------------------- 226 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHT------TCEEEEECCGGGTTSS------SC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhc------CCeEEEEEeCCchhhc------CC---------------------------
Confidence 46799999999999999999999 9999999987643210 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+.+.+.+.+++.||++++++.|+++..+ +.+..|.+.+
T Consensus 227 -------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~v~~v~~~~------------- 266 (480)
T 3cgb_A 227 -------------------------GDMAEYIYKEADKHHIEILTNENVKAFKGN--ERVEAVETDK------------- 266 (480)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEECSCCEEEEEES--SBEEEEEETT-------------
T ss_pred -------------------------HHHHHHHHHHHHHcCcEEEcCCEEEEEEcC--CcEEEEEECC-------------
Confidence 356667788888899999999999998764 4455566543
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 007716 267 QRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~ 286 (592)
.++.+|.||+|+|..+.
T Consensus 267 ---~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 267 ---GTYKADLVLVSVGVKPN 283 (480)
T ss_dssp ---EEEECSEEEECSCEEES
T ss_pred ---CEEEcCEEEECcCCCcC
Confidence 58999999999997764
No 207
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.25 E-value=4.1e-06 Score=87.12 Aligned_cols=102 Identities=24% Similarity=0.367 Sum_probs=79.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcEE
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~~ 187 (592)
.+|+|||||+.|+.+|..|++. |.+|+++|+.+.+.. ++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~-------~~---------------------------- 182 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEA------GYHVKLIHRGAMFLG-------LD---------------------------- 182 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHT------TCEEEEECSSSCCTT-------CC----------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCCeecc-------CC----------------------------
Confidence 5799999999999999999999 999999998764321 00
Q ss_pred EeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccc
Q 007716 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (592)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~ 267 (592)
.++.+.+.+.+++.||+++++++|+++. . . +|.+.+
T Consensus 183 ------------------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~-~---~v~~~~-------------- 218 (367)
T 1xhc_A 183 ------------------------EELSNMIKDMLEETGVKFFLNSELLEAN--E-E---GVLTNS-------------- 218 (367)
T ss_dssp ------------------------HHHHHHHHHHHHHTTEEEECSCCEEEEC--S-S---EEEETT--------------
T ss_pred ------------------------HHHHHHHHHHHHHCCCEEEcCCEEEEEE--e-e---EEEECC--------------
Confidence 2556667788888999999999999886 2 2 366654
Q ss_pred cceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 007716 268 RGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (592)
Q Consensus 268 ~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~ 298 (592)
|. +.+|.||.|+|..+... +.+..+++
T Consensus 219 -g~-i~~D~vi~a~G~~p~~~--ll~~~gl~ 245 (367)
T 1xhc_A 219 -GF-IEGKVKICAIGIVPNVD--LARRSGIH 245 (367)
T ss_dssp -EE-EECSCEEEECCEEECCH--HHHHTTCC
T ss_pred -CE-EEcCEEEECcCCCcCHH--HHHhCCCC
Confidence 56 99999999999988753 55556665
No 208
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.25 E-value=5.9e-06 Score=89.64 Aligned_cols=100 Identities=20% Similarity=0.255 Sum_probs=79.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||||..|+.+|..|++. |.+|+++|+.+.+... ++
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~l~~------~d--------------------------- 222 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTEL------GVPVTVVASQDHVLPY------ED--------------------------- 222 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHT------TCCEEEECSSSSSSCC------SS---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCeEEEEEcCCccccc------cC---------------------------
Confidence 35799999999999999999998 9999999987643210 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+.+.+.+.+++.||+|++++.|+++..++++ + .|.+.+
T Consensus 223 -------------------------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~-v-~v~~~~------------- 262 (499)
T 1xdi_A 223 -------------------------ADAALVLEESFAERGVRLFKNARAASVTRTGAG-V-LVTMTD------------- 262 (499)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEETTCCEEEEEECSSS-E-EEEETT-------------
T ss_pred -------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCE-E-EEEECC-------------
Confidence 256667788888899999999999999876533 4 465544
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 007716 267 QRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~v 287 (592)
|.++.+|.||+|+|.++..
T Consensus 263 --g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 263 --GRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp --SCEEEESEEEECCCEEECC
T ss_pred --CcEEEcCEEEECCCCCcCC
Confidence 5789999999999998763
No 209
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.25 E-value=6.1e-06 Score=88.86 Aligned_cols=107 Identities=18% Similarity=0.237 Sum_probs=79.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||||+.|+.+|..|++. |.+|+|+|+.+.+.... ++
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~~-----~~--------------------------- 219 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRL------GADVTAVEFLGHVGGVG-----ID--------------------------- 219 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSCSS-----CC---------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHc------CCEEEEEeccCccCCcc-----cC---------------------------
Confidence 35799999999999999999999 99999999886432100 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
.++.+.+.+.+++.||++++++.|+++..++++.+ .|.+.+ ..++
T Consensus 220 -------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~---~~~~------ 264 (474)
T 1zmd_A 220 -------------------------MEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKI-DVSIEA---ASGG------ 264 (474)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCE-EEEEEE---TTSC------
T ss_pred -------------------------HHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceE-EEEEEe---cCCC------
Confidence 35566778888889999999999999987664423 344321 0011
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 007716 267 QRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~v 287 (592)
++.++.+|.||+|+|.++..
T Consensus 265 -~~~~i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 265 -KAEVITCDVLLVCIGRRPFT 284 (474)
T ss_dssp -CCEEEEESEEEECSCEEECC
T ss_pred -CceEEEcCEEEECcCCCcCC
Confidence 25789999999999998764
No 210
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.25 E-value=2.7e-07 Score=99.02 Aligned_cols=44 Identities=27% Similarity=0.389 Sum_probs=35.2
Q ss_pred cccEEEECCCHHHHHHHHHHHH-hhhhcCCCCcEEEEcCCCCCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQ-LCREKNVDLSVCVVEKGAEVGA 150 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~-~~~~~~~g~~V~vlEk~~~~g~ 150 (592)
.+||+||||||||+++|..|++ .......|++|+|||+.+.+++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg 47 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWG 47 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCST
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCC
Confidence 4799999999999999999998 5210111789999999887765
No 211
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.23 E-value=8.1e-06 Score=89.88 Aligned_cols=109 Identities=21% Similarity=0.317 Sum_probs=82.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcEE
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~~ 187 (592)
-+|+|||||..|+.+|..|++. |.+|+++|+.+.+... +
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------------------~----------------- 190 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHL------GIKTTLLELADQVMTP------------------V----------------- 190 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSCTT------------------S-----------------
T ss_pred CEEEEECCCHHHHHHHHHHHhc------CCcEEEEEcCCccchh------------------c-----------------
Confidence 4799999999999999999999 9999999987643210 0
Q ss_pred EeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEc------------------CCCcEEEE
Q 007716 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYD------------------ADNKVIGI 249 (592)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~------------------~~g~v~~V 249 (592)
...+.+.+.+.+++.||++++++.++++..+ +++.+ .+
T Consensus 191 -----------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 246 (565)
T 3ntd_A 191 -----------------------DREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHL-SL 246 (565)
T ss_dssp -----------------------CHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEE-EE
T ss_pred -----------------------CHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcE-EE
Confidence 0355667777888899999999999999874 22333 34
Q ss_pred EeccCcccCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 007716 250 GTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (592)
Q Consensus 250 ~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~ 298 (592)
.+.+ |.++.+|.||.|+|..+... +.+..++.
T Consensus 247 ~~~~---------------g~~i~~D~vi~a~G~~p~~~--l~~~~g~~ 278 (565)
T 3ntd_A 247 TLSN---------------GELLETDLLIMAIGVRPETQ--LARDAGLA 278 (565)
T ss_dssp EETT---------------SCEEEESEEEECSCEEECCH--HHHHHTCC
T ss_pred EEcC---------------CCEEEcCEEEECcCCccchH--HHHhCCcc
Confidence 4443 67899999999999988643 44555665
No 212
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.23 E-value=4e-06 Score=90.71 Aligned_cols=100 Identities=25% Similarity=0.291 Sum_probs=77.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||||..|+.+|..|++. |.+|+|+|+.+.+.... ++
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~l~~~-----~~--------------------------- 235 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRK------GKEVVLIDVVDTCLAGY-----YD--------------------------- 235 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSTTTTT-----SC---------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHC------CCeEEEEEcccchhhhH-----HH---------------------------
Confidence 45799999999999999999999 99999999876432100 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
.++.+.+.+.+++.||+|++++.|+++..+ +.+..|.+ +
T Consensus 236 -------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~v~~v~~-~------------- 274 (490)
T 2bc0_A 236 -------------------------RDLTDLMAKNMEEHGIQLAFGETVKEVAGN--GKVEKIIT-D------------- 274 (490)
T ss_dssp -------------------------HHHHHHHHHHHHTTTCEEEETCCEEEEECS--SSCCEEEE-S-------------
T ss_pred -------------------------HHHHHHHHHHHHhCCeEEEeCCEEEEEEcC--CcEEEEEE-C-------------
Confidence 356667788888899999999999998752 44444555 3
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 007716 267 QRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~v 287 (592)
|.++.+|.||+|+|..+..
T Consensus 275 --g~~i~~D~Vi~a~G~~p~~ 293 (490)
T 2bc0_A 275 --KNEYDVDMVILAVGFRPNT 293 (490)
T ss_dssp --SCEEECSEEEECCCEEECC
T ss_pred --CcEEECCEEEECCCCCcCh
Confidence 4689999999999987653
No 213
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.22 E-value=7.3e-06 Score=88.77 Aligned_cols=114 Identities=23% Similarity=0.271 Sum_probs=81.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||||..|+.+|..|++...+ .|.+|+++++.+.+....
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~--~g~~V~~v~~~~~~~~~~---------------------------------- 223 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARA--LGTEVIQLFPEKGNMGKI---------------------------------- 223 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHH--HTCEEEEECSSSSTTTTT----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhh--cCCEEEEEecCccccccc----------------------------------
Confidence 35799999999999999999873110 178999999765321100
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
++ ..+.+.+.+.+++.||++++++.|+++..++ +.+ .|++.+
T Consensus 224 ----------l~-------------~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~-~~~-~v~l~d------------- 265 (493)
T 1m6i_A 224 ----------LP-------------EYLSNWTMEKVRREGVKVMPNAIVQSVGVSS-GKL-LIKLKD------------- 265 (493)
T ss_dssp ----------SC-------------HHHHHHHHHHHHTTTCEEECSCCEEEEEEET-TEE-EEEETT-------------
T ss_pred ----------CC-------------HHHHHHHHHHHHhcCCEEEeCCEEEEEEecC-CeE-EEEECC-------------
Confidence 00 2456667778888999999999999997654 433 577765
Q ss_pred ccceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 007716 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~ 298 (592)
|.++.+|.||+|+|..+... +.+..++.
T Consensus 266 --G~~i~aD~Vv~a~G~~pn~~--l~~~~gl~ 293 (493)
T 1m6i_A 266 --GRKVETDHIVAAVGLEPNVE--LAKTGGLE 293 (493)
T ss_dssp --SCEEEESEEEECCCEEECCT--THHHHTCC
T ss_pred --CCEEECCEEEECCCCCccHH--HHHHcCCc
Confidence 67899999999999887632 33344554
No 214
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.21 E-value=3.7e-06 Score=90.16 Aligned_cols=100 Identities=23% Similarity=0.332 Sum_probs=75.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-+|+|||||++|+.+|..|++. |.+|+|+|+.+.+... ++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------~~--------------------------- 211 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKL------GAQVSVVEARERILPT------YD--------------------------- 211 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSSSSSTT------SC---------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHC------CCeEEEEEcCCccccc------cC---------------------------
Confidence 35799999999999999999999 9999999988753210 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+.+.+.+.+++.||++++++.|+++.. + + + .+... +|+
T Consensus 212 -------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~-~-v-~v~~~------~G~----- 251 (458)
T 1lvl_A 212 -------------------------SELTAPVAESLKKLGIALHLGHSVEGYEN-G-C-L-LANDG------KGG----- 251 (458)
T ss_dssp -------------------------HHHHHHHHHHHHHHTCEEETTCEEEEEET-T-E-E-EEECS------SSC-----
T ss_pred -------------------------HHHHHHHHHHHHHCCCEEEECCEEEEEEe-C-C-E-EEEEC------CCc-----
Confidence 24555677777888999999999999875 3 3 3 34422 232
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 007716 267 QRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~v 287 (592)
..++.+|.||+|+|.++..
T Consensus 252 --~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 252 --QLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp --CCEECCSCEEECCCEEECC
T ss_pred --eEEEECCEEEECcCCCcCC
Confidence 1589999999999988763
No 215
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.20 E-value=1.2e-06 Score=95.62 Aligned_cols=66 Identities=18% Similarity=0.312 Sum_probs=45.2
Q ss_pred HHHHHHH-HcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHc
Q 007716 217 WLGGKAE-ELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNF 295 (592)
Q Consensus 217 ~L~~~a~-~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~ 295 (592)
.+...+. +.+++|+.++.|..+..++ +++++|...+ +++ ...+.|+.||+|.|+-.+ .+|+-..
T Consensus 215 ~~~~~~~~r~nl~v~~~~~v~~i~~~~-~~a~gv~~~~----~~~--------~~~~~a~~VILsAGai~S--P~LLl~S 279 (526)
T 3t37_A 215 WLTKAVRGRKNLTILTGSRVRRLKLEG-NQVRSLEVVG----RQG--------SAEVFADQIVLCAGALES--PALLMRS 279 (526)
T ss_dssp HSCHHHHTCTTEEEECSCEEEEEEEET-TEEEEEEEEE----TTE--------EEEEEEEEEEECSHHHHH--HHHHHHT
T ss_pred cccccccCCCCeEEEeCCEEEEEEecC-CeEEEEEEEe----cCc--------eEEEeecceEEcccccCC--cchhhhc
Confidence 3433333 3569999999999999887 6788887764 122 257889999999997654 3444344
Q ss_pred CC
Q 007716 296 KL 297 (592)
Q Consensus 296 ~l 297 (592)
|+
T Consensus 280 Gi 281 (526)
T 3t37_A 280 GI 281 (526)
T ss_dssp TE
T ss_pred cC
Confidence 44
No 216
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.19 E-value=8e-06 Score=88.20 Aligned_cols=100 Identities=19% Similarity=0.260 Sum_probs=80.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
..+|+|||+|+.|+..|..|++. |.+|+++|+.+.+... ++
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~------g~~Vtli~~~~~~l~~------~~--------------------------- 231 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGL------GVKTTLLHRGDLILRN------FD--------------------------- 231 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT------SC---------------------------
T ss_pred CCcEEEECcCHHHHHHHHHHHHc------CCeEEEEECCCccccc------cC---------------------------
Confidence 45799999999999999999998 9999999987643210 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+.+.|.+.+++.||++++++.|+++..+++ .+ .|.+.+
T Consensus 232 -------------------------~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~-~v-~v~~~~------------- 271 (484)
T 3o0h_A 232 -------------------------YDLRQLLNDAMVAKGISIIYEATVSQVQSTEN-CY-NVVLTN------------- 271 (484)
T ss_dssp -------------------------HHHHHHHHHHHHHHTCEEESSCCEEEEEECSS-SE-EEEETT-------------
T ss_pred -------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCC-EE-EEEECC-------------
Confidence 35666778888889999999999999988764 34 577765
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 007716 267 QRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~v 287 (592)
|.++.+|.||+|+|.++..
T Consensus 272 --g~~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 272 --GQTICADRVMLATGRVPNT 290 (484)
T ss_dssp --SCEEEESEEEECCCEEECC
T ss_pred --CcEEEcCEEEEeeCCCcCC
Confidence 5789999999999987653
No 217
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.19 E-value=6.8e-06 Score=88.32 Aligned_cols=98 Identities=17% Similarity=0.163 Sum_probs=78.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||||+.|+.+|..|++. |.+|+++|+.+.+.. ++
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~-------~~--------------------------- 215 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARL------GSKVTVLARNTLFFR-------ED--------------------------- 215 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCTTTT-------SC---------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHc------CCEEEEEEECCccCC-------CC---------------------------
Confidence 45799999999999999999999 999999998763210 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+.+.+.+.+++.||++++++.|+++..++ + .+.|.+.+
T Consensus 216 -------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~-~~~v~~~~------------- 255 (467)
T 1zk7_A 216 -------------------------PAIGEAVTAAFRAEGIEVLEHTQASQVAHMD-G-EFVLTTTH------------- 255 (467)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEETTCCEEEEEEET-T-EEEEEETT-------------
T ss_pred -------------------------HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-C-EEEEEECC-------------
Confidence 2566677888888999999999999998754 3 33566543
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 007716 267 QRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~v 287 (592)
.++.+|.||+|+|.++..
T Consensus 256 ---~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 256 ---GELRADKLLVATGRTPNT 273 (467)
T ss_dssp ---EEEEESEEEECSCEEESC
T ss_pred ---cEEEcCEEEECCCCCcCC
Confidence 589999999999998764
No 218
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.18 E-value=1.1e-05 Score=86.83 Aligned_cols=104 Identities=18% Similarity=0.237 Sum_probs=78.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
...|+|||||..|+.+|..|++. |.+|+|+|+.+.+... ++
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~------~d--------------------------- 214 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARL------GAEVTVVEFAPRCAPT------LD--------------------------- 214 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT------SC---------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHh------CCEEEEEecCCccccc------CC---------------------------
Confidence 35799999999999999999999 9999999988643210 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHH-HHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKA-EELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a-~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
.++.+.+.+.+ ++.||+++++++|+++..++++ + .|.+.+ .+|+
T Consensus 215 -------------------------~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~----~~g~---- 259 (468)
T 2qae_A 215 -------------------------EDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDS-V-SLEVEG----KNGK---- 259 (468)
T ss_dssp -------------------------HHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSS-E-EEEEEC----C-------
T ss_pred -------------------------HHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCe-E-EEEEEc----CCCc----
Confidence 34566677778 8899999999999999876543 3 355431 1222
Q ss_pred cccceEEEcCEEEEecCCCCcc
Q 007716 266 FQRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~v 287 (592)
+.++.+|.||+|+|.++..
T Consensus 260 ---~~~i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 260 ---RETVTCEALLVSVGRRPFT 278 (468)
T ss_dssp ---EEEEEESEEEECSCEEECC
T ss_pred ---eEEEECCEEEECCCcccCC
Confidence 2679999999999998764
No 219
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.18 E-value=1.1e-06 Score=100.00 Aligned_cols=40 Identities=35% Similarity=0.547 Sum_probs=36.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH 151 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~ 151 (592)
..+||+||||||||+++|+.|++. |++|+|||+.+.+|+.
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~------G~~Vtlie~~~~~GG~ 427 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMES------GYTVHLTDTAEKIGGH 427 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSTTTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCCCcCCe
Confidence 468999999999999999999999 9999999999887764
No 220
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.18 E-value=9.4e-06 Score=87.10 Aligned_cols=99 Identities=20% Similarity=0.247 Sum_probs=79.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
...|+|||||+.|+.+|..|++. |.+|+++|+.+.+... +
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~------g~~Vt~v~~~~~~l~~------------------~---------------- 209 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGL------GVKTTLIYRGKEILSR------------------F---------------- 209 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT------------------S----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCeEEEEEcCCccccc------------------c----------------
Confidence 45799999999999999999998 9999999987643210 0
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEE-eccCcccCCCCcccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIG-TNDMGIAKDGSKKEN 265 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~-~~d~g~~~~G~~~~~ 265 (592)
+ ..+.+.+.+.+++.||+|++++.|+++..++++.+ .|. +.+
T Consensus 210 -----------~-------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~------------ 252 (463)
T 4dna_A 210 -----------D-------------QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRR-VATTMKH------------ 252 (463)
T ss_dssp -----------C-------------HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCE-EEEESSS------------
T ss_pred -----------C-------------HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEE-EEEEcCC------------
Confidence 0 35667788888889999999999999988765543 577 665
Q ss_pred cccceEEEcCEEEEecCCCCc
Q 007716 266 FQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|. +.+|.||+|+|.++.
T Consensus 253 ---g~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 253 ---GE-IVADQVMLALGRMPN 269 (463)
T ss_dssp ---CE-EEESEEEECSCEEES
T ss_pred ---Ce-EEeCEEEEeeCcccC
Confidence 56 999999999997765
No 221
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.18 E-value=7.6e-06 Score=89.71 Aligned_cols=62 Identities=23% Similarity=0.387 Sum_probs=44.7
Q ss_pred HcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcC-EEEEecCCCCcchHHHHHHcCC
Q 007716 224 ELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGR-ITLLAEGCRGSLSEKLIKNFKL 297 (592)
Q Consensus 224 ~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~-~vI~A~G~~s~vr~~l~~~~~l 297 (592)
+.|++|++++.|++|+.+++++++||.+.+. .+|+. .+++|+ .||+|+|+..+ .+|....|+
T Consensus 221 ~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~---~~g~~-------~~i~A~k~VIlaaG~~~s--p~lL~~SGi 283 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVFDADRRCTGVDIVDS---AFGHT-------HRLTARNEVVLSTGAIDT--PKLLMLSGI 283 (546)
T ss_dssp CTTEEEECSCEEEEEEECTTSBEEEEEEESS---TTSCE-------EEEEEEEEEEECSHHHHH--HHHHHHTTE
T ss_pred CCCcEEEeCCEEEEEEECCCCeEEEEEEEEC---CCCcE-------EEEEeCccEEEecCccCC--chhhhhcCC
Confidence 5689999999999999876577889987641 11332 578998 99999998532 344444443
No 222
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.18 E-value=1.4e-05 Score=85.98 Aligned_cols=111 Identities=23% Similarity=0.270 Sum_probs=84.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
..+|+|||+|+.|+.+|..|++.. |.+|+++|+.+.+.... +
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~-----g~~Vtlv~~~~~~l~~~-----~---------------------------- 200 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMW-----GIDTTVVELADQIMPGF-----T---------------------------- 200 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHH-----CCEEEEECSSSSSSTTT-----S----------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhc-----CCcEEEEEccCcccccc-----c----------------------------
Confidence 457999999999999999998852 88999999876432100 0
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
...+.+.|.+.+++.||+++++++|+++..++ +.+. |.+.+
T Consensus 201 ------------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~-v~~~~------------- 241 (472)
T 3iwa_A 201 ------------------------SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGEN-GKVA-RVITD------------- 241 (472)
T ss_dssp ------------------------CHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-SBEE-EEEES-------------
T ss_pred ------------------------CHHHHHHHHHHHHhcCCEEEeCCEEEEEEccC-CeEE-EEEeC-------------
Confidence 03567778888888999999999999998754 4453 66554
Q ss_pred ccceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 007716 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~ 298 (592)
|.++.+|.||+|+|.++... +.+..++.
T Consensus 242 --g~~i~aD~Vv~a~G~~p~~~--l~~~~gl~ 269 (472)
T 3iwa_A 242 --KRTLDADLVILAAGVSPNTQ--LARDAGLE 269 (472)
T ss_dssp --SCEEECSEEEECSCEEECCH--HHHHHTCC
T ss_pred --CCEEEcCEEEECCCCCcCHH--HHHhCCcc
Confidence 57899999999999987642 44556665
No 223
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.17 E-value=1.1e-05 Score=87.36 Aligned_cols=104 Identities=14% Similarity=0.134 Sum_probs=79.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||||..|+.+|..|++.. .+|.+|+|+|+.+.+... ++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~---~~g~~Vtlv~~~~~~l~~------~d--------------------------- 234 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYK---PPGGKVTLCYRNNLILRG------FD--------------------------- 234 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHC---CTTCEEEEEESSSSSCTT------SC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhC---CCCCeEEEEEcCCccccc------cC---------------------------
Confidence 357999999999999999998861 128899999987643210 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
.++.+.+.+.+++.||++++++.|+++..++++. +.|++.+
T Consensus 235 -------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~------------- 275 (495)
T 2wpf_A 235 -------------------------ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGS-KHVTFES------------- 275 (495)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSC-EEEEETT-------------
T ss_pred -------------------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCce-EEEEECC-------------
Confidence 2456667778888999999999999998765443 3577655
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 007716 267 QRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~v 287 (592)
|.++.+|.||+|+|.++.+
T Consensus 276 --G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 276 --GKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp --SCEEEESEEEECSCEEECC
T ss_pred --CcEEEcCEEEECCCCcccc
Confidence 5689999999999987753
No 224
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.17 E-value=1.1e-05 Score=86.72 Aligned_cols=103 Identities=22% Similarity=0.311 Sum_probs=78.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||||..|+.+|..|++. |.+|+|+|+.+.+... ++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~------~~--------------------------- 211 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNY------GVDVTIVEFLPRALPN------ED--------------------------- 211 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT------SC---------------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHc------CCeEEEEEcCCccccc------cC---------------------------
Confidence 35799999999999999999999 9999999988643210 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
.++.+.+.+.+++.||++++++.|+++..++++ + .|.+.+ +|+
T Consensus 212 -------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~-----~g~----- 254 (464)
T 2a8x_A 212 -------------------------ADVSKEIEKQFKKLGVTILTATKVESIADGGSQ-V-TVTVTK-----DGV----- 254 (464)
T ss_dssp -------------------------HHHHHHHHHHHHHHTCEEECSCEEEEEEECSSC-E-EEEEES-----SSC-----
T ss_pred -------------------------HHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCe-E-EEEEEc-----CCc-----
Confidence 245566777788889999999999999876533 3 355431 222
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 007716 267 QRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~v 287 (592)
+.++.+|.||.|+|..+..
T Consensus 255 --~~~~~~D~vv~a~G~~p~~ 273 (464)
T 2a8x_A 255 --AQELKAEKVLQAIGFAPNV 273 (464)
T ss_dssp --EEEEEESEEEECSCEEECC
T ss_pred --eEEEEcCEEEECCCCCccC
Confidence 2689999999999988764
No 225
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.16 E-value=1.1e-05 Score=87.25 Aligned_cols=103 Identities=17% Similarity=0.160 Sum_probs=79.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||||+.|+.+|..|++.. .+|.+|+|+|+.+.+... ++
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~---~~g~~Vtlv~~~~~~l~~------~d--------------------------- 230 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYK---ARGGQVDLAYRGDMILRG------FD--------------------------- 230 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHS---CTTCEEEEEESSSSSSTT------SC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhc---cCcCeEEEEEcCCCcccc------cC---------------------------
Confidence 357999999999999999998861 128899999988643210 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+.+.|.+.+++.||+|++++.|+++..++++. +.|.+.+
T Consensus 231 -------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~------------- 271 (490)
T 1fec_A 231 -------------------------SELRKQLTEQLRANGINVRTHENPAKVTKNADGT-RHVVFES------------- 271 (490)
T ss_dssp -------------------------HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSC-EEEEETT-------------
T ss_pred -------------------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCE-EEEEECC-------------
Confidence 2556677888888999999999999998765443 3577655
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 007716 267 QRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++.+|.||+|+|.++.
T Consensus 272 --G~~i~~D~vv~a~G~~p~ 289 (490)
T 1fec_A 272 --GAEADYDVVMLAIGRVPR 289 (490)
T ss_dssp --SCEEEESEEEECSCEEES
T ss_pred --CcEEEcCEEEEccCCCcC
Confidence 568999999999998765
No 226
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.15 E-value=1.7e-06 Score=91.17 Aligned_cols=43 Identities=30% Similarity=0.526 Sum_probs=38.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCccc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII 153 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~ 153 (592)
.++||+|||||++||++|+.|++. +|.+|+|+|+++.+||++.
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~-----~g~~v~v~E~~~~~GG~~~ 48 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQ-----LDKRVLVLERRPHIGGNAY 48 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHH-----SCCCEEEECSSSSSSGGGC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHh-----CCCCEEEEeCCCCCCCeee
Confidence 368999999999999999999986 3899999999999988763
No 227
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.14 E-value=1.7e-06 Score=91.52 Aligned_cols=41 Identities=34% Similarity=0.580 Sum_probs=38.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCC-CcEEEEcCCCCCCCcc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVD-LSVCVVEKGAEVGAHI 152 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g-~~V~vlEk~~~~g~~~ 152 (592)
+++||+|||||++||+||+.|++. | .+|+|+|+.+.+||++
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~------g~~~v~v~E~~~~~GG~~ 46 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA------GFHDYTILERTDHVGGKC 46 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT------TCCCEEEECSSSCSSTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC------CCCcEEEEECCCCCCCcc
Confidence 468999999999999999999998 9 8999999999998865
No 228
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.13 E-value=1.7e-05 Score=85.71 Aligned_cols=105 Identities=20% Similarity=0.299 Sum_probs=80.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||||+.|+.+|..|++. |.+|+|+|+.+.+... ++
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~------~d--------------------------- 238 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARL------GAKVTVVEFLDTILGG------MD--------------------------- 238 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSSSSSSS------SC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCEEEEEecccccccc------CC---------------------------
Confidence 45799999999999999999999 9999999987753210 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+.+.+.+.+++.||+++++++|+++..++++ + .|.+.+. .+|+
T Consensus 239 -------------------------~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~-~-~v~~~~~---~~g~----- 283 (491)
T 3urh_A 239 -------------------------GEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDG-A-KVTFEPV---KGGE----- 283 (491)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTE-E-EEEEEET---TSCC-----
T ss_pred -------------------------HHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCE-E-EEEEEec---CCCc-----
Confidence 356667788888899999999999999877633 3 3555430 1132
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 007716 267 QRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~v 287 (592)
..++.+|.||.|+|..+..
T Consensus 284 --~~~i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 284 --ATTLDAEVVLIATGRKPST 302 (491)
T ss_dssp --CEEEEESEEEECCCCEECC
T ss_pred --eEEEEcCEEEEeeCCccCC
Confidence 2689999999999988764
No 229
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.13 E-value=7.9e-06 Score=87.82 Aligned_cols=105 Identities=17% Similarity=0.250 Sum_probs=79.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||||+.|+.+|..|++. |.+|+|+|+.+.+... ++
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtli~~~~~~l~~------~~--------------------------- 217 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRI------GSEVTVVEFASEIVPT------MD--------------------------- 217 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHH------TCEEEEECSSSSSSTT------SC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCcEEEEEcCCccccc------cc---------------------------
Confidence 35799999999999999999999 9999999988643210 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+.+.+.+.+++.||++++++.|+++..++++ + .|.+.+ ..+|+
T Consensus 218 -------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~---~~~g~----- 262 (470)
T 1dxl_A 218 -------------------------AEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDG-V-KLTVEP---SAGGE----- 262 (470)
T ss_dssp -------------------------HHHHHHHHHHHHHSSCCEECSEEEEEEECSSSS-E-EEEEEE---SSSCC-----
T ss_pred -------------------------HHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCe-E-EEEEEe---cCCCc-----
Confidence 255666778888899999999999999866533 3 355432 01232
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 007716 267 QRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~v 287 (592)
+.++.+|.||+|+|..+..
T Consensus 263 --~~~~~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 263 --QTIIEADVVLVSAGRTPFT 281 (470)
T ss_dssp --CEEEEESEEECCCCEEECC
T ss_pred --ceEEECCEEEECCCCCcCC
Confidence 3689999999999988753
No 230
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.12 E-value=1.9e-05 Score=85.04 Aligned_cols=108 Identities=19% Similarity=0.052 Sum_probs=80.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||||..|+.+|..|++. |.+|+++++.+.+... +.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~------------------~d--------------- 227 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSAL------GSKTSLMIRHDKVLRS------------------FD--------------- 227 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTT------------------SC---------------
T ss_pred CccEEEECCCHHHHHHHHHHHHc------CCeEEEEEeCCccccc------------------cC---------------
Confidence 35799999999999999999999 9999999987643210 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+.+.+.+.+++.||++++++.++++..++++..+.|.+.+. .+|+.
T Consensus 228 -------------------------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~---~~g~~---- 275 (478)
T 3dk9_A 228 -------------------------SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVP---GRLPV---- 275 (478)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCT---TSCCE----
T ss_pred -------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccC---CCCcc----
Confidence 3556667788888999999999999998876563335666541 11210
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 007716 267 QRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~ 286 (592)
+|.++.+|.||+|+|..+.
T Consensus 276 -~g~~~~~D~vi~a~G~~p~ 294 (478)
T 3dk9_A 276 -MTMIPDVDCLLWAIGRVPN 294 (478)
T ss_dssp -EEEEEEESEEEECSCEEES
T ss_pred -cceEEEcCEEEEeeccccC
Confidence 1368999999999997654
No 231
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.12 E-value=1.5e-05 Score=86.98 Aligned_cols=101 Identities=21% Similarity=0.183 Sum_probs=80.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
..-.++|||||+.|+..|..++++ |.+|+|+++...+.. +.
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~l------G~~VTii~~~~~L~~-------------------~D-------------- 262 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSL------GYDVTVAVRSIVLRG-------------------FD-------------- 262 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH------TCCEEEEESSCSSTT-------------------SC--------------
T ss_pred CCceEEEECCCHHHHHHHHHHHhc------CCeEEEecccccccc-------------------cc--------------
Confidence 345799999999999999999999 999999987542211 00
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
.++...+.+.+++.|++++++..+..+...++ .+ .|.+.+
T Consensus 263 --------------------------~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~-~~-~v~~~~------------ 302 (542)
T 4b1b_A 263 --------------------------QQCAVKVKLYMEEQGVMFKNGILPKKLTKMDD-KI-LVEFSD------------ 302 (542)
T ss_dssp --------------------------HHHHHHHHHHHHHTTCEEEETCCEEEEEEETT-EE-EEEETT------------
T ss_pred --------------------------hhHHHHHHHHHHhhcceeecceEEEEEEecCC-eE-EEEEcC------------
Confidence 36677788888899999999999999988763 33 466654
Q ss_pred cccceEEEcCEEEEecCCCCcch
Q 007716 266 FQRGVELRGRITLLAEGCRGSLS 288 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~vr 288 (592)
+.++.+|.|++|+|.++.+.
T Consensus 303 ---~~~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 303 ---KTSELYDTVLYAIGRKGDID 322 (542)
T ss_dssp ---SCEEEESEEEECSCEEESCG
T ss_pred ---CCeEEEEEEEEcccccCCcc
Confidence 46788999999999888753
No 232
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.12 E-value=2.1e-06 Score=89.98 Aligned_cols=43 Identities=35% Similarity=0.493 Sum_probs=39.3
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCccc
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII 153 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~ 153 (592)
...+||+|||||++||++|+.|++. |.+|+|+|+++.+|+.+.
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~------g~~v~v~E~~~~~GG~~~ 69 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASS------GQRVLIVDRRPHIGGNAY 69 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSSGGGC
T ss_pred CCCCCEEEECccHHHHHHHHHHHHC------CCceEEEeccCCCCCccc
Confidence 3579999999999999999999998 999999999998888764
No 233
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.10 E-value=1.7e-05 Score=87.80 Aligned_cols=107 Identities=16% Similarity=0.236 Sum_probs=83.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
...|+|||||..|+.+|..|++. |.+|+++|+.+.+... ++
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------~~--------------------------- 227 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRER------GIEVTLVEMANQVMPP------ID--------------------------- 227 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTT------SC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCeEEEEecCCccccc------CC---------------------------
Confidence 35799999999999999999999 9999999987643210 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+.+.+.+.+++.||++++++.|+++..+++ +|.+.+
T Consensus 228 -------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~----~v~~~~------------- 265 (588)
T 3ics_A 228 -------------------------YEMAAYVHEHMKNHDVELVFEDGVDALEENGA----VVRLKS------------- 265 (588)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEECSCCEEEEEGGGT----EEEETT-------------
T ss_pred -------------------------HHHHHHHHHHHHHcCCEEEECCeEEEEecCCC----EEEECC-------------
Confidence 35566777888889999999999999876542 356554
Q ss_pred ccceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 007716 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~ 298 (592)
|.++.+|.||+|+|.++.. .+.+..++.
T Consensus 266 --g~~i~~D~Vi~a~G~~p~~--~~l~~~g~~ 293 (588)
T 3ics_A 266 --GSVIQTDMLILAIGVQPES--SLAKGAGLA 293 (588)
T ss_dssp --SCEEECSEEEECSCEEECC--HHHHHTTCC
T ss_pred --CCEEEcCEEEEccCCCCCh--HHHHhcCce
Confidence 5789999999999998764 345566665
No 234
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.09 E-value=2.3e-06 Score=88.94 Aligned_cols=42 Identities=36% Similarity=0.476 Sum_probs=38.1
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCC-CCCCCcc
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKG-AEVGAHI 152 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~-~~~g~~~ 152 (592)
...+||+|||||++||++|+.|++. |++|+|+|+. ..+|+++
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~------G~~V~VlE~~~~~vGGr~ 84 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA------GHDVTILEANANRVGGRI 84 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT------SCEEEEECSCSSCCBTTC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC------CCcEEEEeccccccCCce
Confidence 3468999999999999999999999 9999999999 8888754
No 235
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.08 E-value=2e-05 Score=84.80 Aligned_cols=103 Identities=18% Similarity=0.145 Sum_probs=78.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
...|+|||||+.|+.+|..|++. |.+|+++|+.+.+... +
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------------------~---------------- 219 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARL------GAEVTVLEAMDKFLPA------------------V---------------- 219 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSSTT------------------S----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCcEEEEecCCCcCcc------------------c----------------
Confidence 45799999999999999999999 9999999987643210 0
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
+ ..+.+.+.+.+++.||++++++.|+++..++++ + .|.+.+ .+|
T Consensus 220 -----------~-------------~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~-~-~v~~~~----~~g------ 263 (476)
T 3lad_A 220 -----------D-------------EQVAKEAQKILTKQGLKILLGARVTGTEVKNKQ-V-TVKFVD----AEG------ 263 (476)
T ss_dssp -----------C-------------HHHHHHHHHHHHHTTEEEEETCEEEEEEECSSC-E-EEEEES----SSE------
T ss_pred -----------C-------------HHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCE-E-EEEEEe----CCC------
Confidence 0 356667778888899999999999999877643 3 355543 111
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 007716 267 QRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~v 287 (592)
..++.+|.||.|+|..+..
T Consensus 264 --~~~~~~D~vi~a~G~~p~~ 282 (476)
T 3lad_A 264 --EKSQAFDKLIVAVGRRPVT 282 (476)
T ss_dssp --EEEEEESEEEECSCEEECC
T ss_pred --cEEEECCEEEEeeCCcccC
Confidence 1679999999999987653
No 236
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.07 E-value=2.7e-05 Score=84.26 Aligned_cols=103 Identities=20% Similarity=0.222 Sum_probs=77.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||||+.|+.+|..|++. |.+|+|+|+.+.+... ++
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~l~~------~d--------------------------- 214 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRL------GVIVKVFGRSGSVANL------QD--------------------------- 214 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHT------TCEEEEECCTTCCTTC------CC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCeEEEEEECCccccc------CC---------------------------
Confidence 45799999999999999999999 9999999988754320 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+.+.+.+.+++. |++++++.++++..++++ + .|.+.+ .+|+.
T Consensus 215 -------------------------~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~-v-~v~~~~----~~G~~---- 258 (492)
T 3ic9_A 215 -------------------------EEMKRYAEKTFNEE-FYFDAKARVISTIEKEDA-V-EVIYFD----KSGQK---- 258 (492)
T ss_dssp -------------------------HHHHHHHHHHHHTT-SEEETTCEEEEEEECSSS-E-EEEEEC----TTCCE----
T ss_pred -------------------------HHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCE-E-EEEEEe----CCCce----
Confidence 25556667777767 999999999999877643 4 255432 23321
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 007716 267 QRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~v 287 (592)
.++.+|.||+|+|..+..
T Consensus 259 ---~~i~~D~Vi~a~G~~p~~ 276 (492)
T 3ic9_A 259 ---TTESFQYVLAATGRKANV 276 (492)
T ss_dssp ---EEEEESEEEECSCCEESC
T ss_pred ---EEEECCEEEEeeCCccCC
Confidence 689999999999988753
No 237
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.07 E-value=2.8e-06 Score=91.81 Aligned_cols=41 Identities=34% Similarity=0.596 Sum_probs=38.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~ 152 (592)
+.+||+|||||++||+||+.|++. |.+|+|+|+.+.+|+++
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~------g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKA------GYKVTVLEARTRPGGRV 50 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC------CCCEEEEeccCCCCCce
Confidence 468999999999999999999998 99999999999998864
No 238
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.07 E-value=1e-05 Score=87.30 Aligned_cols=104 Identities=17% Similarity=0.100 Sum_probs=78.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||||..|+.+|..|++. |.+|+|+|+.+.+... ++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~------G~~Vtlv~~~~~~l~~------~~--------------------------- 225 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTL------GSRLDVVEMMDGLMQG------AD--------------------------- 225 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHH------TCEEEEECSSSSSSTT------SC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCeEEEEEECCccccc------cC---------------------------
Confidence 45799999999999999999999 9999999987643210 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
.++.+.+.+.+++.||++++++.|+++..++++ ..|.+.+. ++
T Consensus 226 -------------------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~--~~v~~~~~----~~------ 268 (482)
T 1ojt_A 226 -------------------------RDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDG--VYVTFEGA----NA------ 268 (482)
T ss_dssp -------------------------HHHHHHHHHHHGGGEEEEECSCEEEEEEEETTE--EEEEEESS----SC------
T ss_pred -------------------------HHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCe--EEEEEecc----CC------
Confidence 255666777788899999999999999876532 34555430 11
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 007716 267 QRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~v 287 (592)
.|.++.+|.||+|+|.++..
T Consensus 269 -~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 269 -PKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp -CSSCEEESCEEECCCEEECG
T ss_pred -CceEEEcCEEEECcCCCcCC
Confidence 13568899999999998764
No 239
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.06 E-value=1.3e-05 Score=82.81 Aligned_cols=102 Identities=21% Similarity=0.270 Sum_probs=75.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||+|+.|+.+|..|++. +.+|+++++.+.+...
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~------g~~V~lv~~~~~~~~~----------------------------------- 201 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKN------AASVTLVHRGHEFQGH----------------------------------- 201 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTT------SSEEEEECSSSSCSSC-----------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhc------CCEEEEEEcCCCCCCC-----------------------------------
Confidence 35799999999999999999998 9999999987643210
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+.+.|.+..++.||++++++.++++..++ +.+.+|.+.. .+|+
T Consensus 202 -------------------------~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~----~~g~----- 246 (360)
T 3ab1_A 202 -------------------------GKTAHEVERARANGTIDVYLETEVASIEESN-GVLTRVHLRS----SDGS----- 246 (360)
T ss_dssp -------------------------SHHHHSSHHHHHHTSEEEESSEEEEEEEEET-TEEEEEEEEE----TTCC-----
T ss_pred -------------------------HHHHHHHHHHhhcCceEEEcCcCHHHhccCC-CceEEEEEEe----cCCC-----
Confidence 0122335555667899999999999998765 5565676641 1232
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 007716 267 QRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~ 286 (592)
..++.+|.||.|+|..+.
T Consensus 247 --~~~i~~D~vi~a~G~~p~ 264 (360)
T 3ab1_A 247 --KWTVEADRLLILIGFKSN 264 (360)
T ss_dssp --EEEEECSEEEECCCBCCS
T ss_pred --eEEEeCCEEEECCCCCCC
Confidence 168999999999996654
No 240
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.05 E-value=2.8e-05 Score=79.13 Aligned_cols=102 Identities=19% Similarity=0.207 Sum_probs=75.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||+|..|+.+|..|++. |.+|+++++.+.+...
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~------g~~V~~v~~~~~~~~~----------------------------------- 190 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDT------ARRITLIHRRPQFRAH----------------------------------- 190 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTT------SSEEEEECSSSSCCSC-----------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhh------CCEEEEEEcCCccCcc-----------------------------------
Confidence 35799999999999999999998 9999999987643210
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+.+.|.+.+++.||++++++.+.++..+ +.+.+|.+.+ ..+|+
T Consensus 191 -------------------------~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~--~~~~~v~~~~---~~~g~----- 235 (335)
T 2zbw_A 191 -------------------------EASVKELMKAHEEGRLEVLTPYELRRVEGD--ERVRWAVVFH---NQTQE----- 235 (335)
T ss_dssp -------------------------HHHHHHHHHHHHTTSSEEETTEEEEEEEES--SSEEEEEEEE---TTTCC-----
T ss_pred -------------------------HHHHHHHHhccccCCeEEecCCcceeEccC--CCeeEEEEEE---CCCCc-----
Confidence 123344666677789999999999999874 4455676652 01232
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 007716 267 QRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~ 286 (592)
..++.+|.||.|+|..+.
T Consensus 236 --~~~i~~D~vi~a~G~~p~ 253 (335)
T 2zbw_A 236 --ELALEVDAVLILAGYITK 253 (335)
T ss_dssp --EEEEECSEEEECCCEEEE
T ss_pred --eEEEecCEEEEeecCCCC
Confidence 268999999999996543
No 241
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.04 E-value=2.9e-06 Score=88.26 Aligned_cols=41 Identities=39% Similarity=0.593 Sum_probs=37.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCccc
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII 153 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~ 153 (592)
++||+|||||++||++|+.|++. |.+|+|+|+++.+|+.+.
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~------g~~v~v~E~~~~~GG~~~ 41 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKL------NKKVLVIEKRNHIGGNAY 41 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGG------TCCEEEECSSSSSSGGGC
T ss_pred CCCEEEECcCHHHHHHHHHHHhC------CCcEEEEecCCCCCcceE
Confidence 37999999999999999999998 999999999998988763
No 242
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.02 E-value=2.2e-05 Score=84.67 Aligned_cols=103 Identities=22% Similarity=0.254 Sum_probs=77.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcEE
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~~ 187 (592)
-.|+|||||+.|+.+|..|++. |.+|+++++...... +.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~l~~-------------------~d---------------- 226 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGL------GYEPTVMVRSIVLRG-------------------FD---------------- 226 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSCSSTT-------------------SC----------------
T ss_pred CcEEEECCCHHHHHHHHHHHHc------CCEEEEEeCCCCCcc-------------------cC----------------
Confidence 4699999999999999999999 999999997431110 00
Q ss_pred EeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccc
Q 007716 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (592)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~ 267 (592)
.++.+.+.+.+++.||++++++.++++..++++.+ .|++.+ ..+|+
T Consensus 227 ------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~---~~~~~------ 272 (483)
T 3dgh_A 227 ------------------------QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKN---VETGE------ 272 (483)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEE---TTTCC------
T ss_pred ------------------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEec---CCCCc------
Confidence 25666778888889999999999999988665544 466554 11122
Q ss_pred cceEEEcCEEEEecCCCCc
Q 007716 268 RGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 268 ~g~~i~a~~vI~A~G~~s~ 286 (592)
..++.+|.||+|+|..+.
T Consensus 273 -~~~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 273 -ESEDVYDTVLWAIGRKGL 290 (483)
T ss_dssp -EEEEEESEEEECSCEEEC
T ss_pred -eeEEEcCEEEECcccccC
Confidence 257999999999997664
No 243
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.02 E-value=1.6e-05 Score=80.49 Aligned_cols=99 Identities=20% Similarity=0.236 Sum_probs=72.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
...|+|||+|+.|+.+|..|++. +.+|+++++.+.+.. .
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~------g~~V~~i~~~~~~~~--------~--------------------------- 193 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEY------VKNVTIIEYMPKYMC--------E--------------------------- 193 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT------BSEEEEECSSSSCCS--------C---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhh------CCcEEEEEcCCccCC--------C---------------------------
Confidence 35799999999999999999998 999999998653211 0
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
.. +.+.+++.||++++++.++++..++ +.+.+|.+.+ ..+|+.
T Consensus 194 -------------------------~~----l~~~l~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~---~~~g~~---- 236 (319)
T 3cty_A 194 -------------------------NA----YVQEIKKRNIPYIMNAQVTEIVGDG-KKVTGVKYKD---RTTGEE---- 236 (319)
T ss_dssp -------------------------HH----HHHHHHHTTCCEECSEEEEEEEESS-SSEEEEEEEE---TTTCCE----
T ss_pred -------------------------HH----HHHHHhcCCcEEEcCCeEEEEecCC-ceEEEEEEEE---cCCCce----
Confidence 11 3334456899999999999998764 5566677652 012321
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 007716 267 QRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~ 286 (592)
.++.+|.||+|+|..+.
T Consensus 237 ---~~i~~D~vi~a~G~~p~ 253 (319)
T 3cty_A 237 ---KLIETDGVFIYVGLIPQ 253 (319)
T ss_dssp ---EEECCSEEEECCCEEEC
T ss_pred ---EEEecCEEEEeeCCccC
Confidence 47899999999996543
No 244
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.01 E-value=3.1e-05 Score=77.88 Aligned_cols=98 Identities=24% Similarity=0.298 Sum_probs=72.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||+|+.|+.+|..|++. +.+|+++++.+.+.. +
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~--------~--------------------------- 182 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGI------VEHVTLLEFAPEMKA--------D--------------------------- 182 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT------BSEEEEECSSSSCCS--------C---------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHh------CCEEEEEEeCcccCc--------c---------------------------
Confidence 35799999999999999999998 999999998764310 0
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHH-cCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~-~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
..+.+.+++ .||++++++.++++..++ +.+.+|++.+. .+|+
T Consensus 183 -----------------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~-~~v~~v~~~~~---~~g~---- 225 (310)
T 1fl2_A 183 -----------------------------QVLQDKLRSLKNVDIILNAQTTEVKGDG-SKVVGLEYRDR---VSGD---- 225 (310)
T ss_dssp -----------------------------HHHHHHHHTCTTEEEESSEEEEEEEESS-SSEEEEEEEET---TTCC----
T ss_pred -----------------------------HHHHHHHhhCCCeEEecCCceEEEEcCC-CcEEEEEEEEC---CCCc----
Confidence 113344455 599999999999998764 56667777541 1232
Q ss_pred cccceEEEcCEEEEecCCCC
Q 007716 266 FQRGVELRGRITLLAEGCRG 285 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s 285 (592)
..++.+|.||.|+|..+
T Consensus 226 ---~~~i~~D~vi~a~G~~p 242 (310)
T 1fl2_A 226 ---IHNIELAGIFVQIGLLP 242 (310)
T ss_dssp ---EEEEECSEEEECSCEEE
T ss_pred ---EEEEEcCEEEEeeCCcc
Confidence 15789999999999554
No 245
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.01 E-value=7.4e-06 Score=90.59 Aligned_cols=68 Identities=18% Similarity=0.333 Sum_probs=47.5
Q ss_pred HHHHHHHHcCCEEecCceEEEEEEcCC---CcEEEEEeccCcccCCCCcccccccceEEEc-CEEEEecCCCCcchHHHH
Q 007716 217 WLGGKAEELGVEIYPGFAASEILYDAD---NKVIGIGTNDMGIAKDGSKKENFQRGVELRG-RITLLAEGCRGSLSEKLI 292 (592)
Q Consensus 217 ~L~~~a~~~Gv~i~~g~~v~~i~~~~~---g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a-~~vI~A~G~~s~vr~~l~ 292 (592)
+|...+++.|++|++++.|++|+.+++ ++++||...+ .+|+. .+++| |.||+|+|+..+ .+|+
T Consensus 236 ~l~~~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~----~~g~~-------~~v~A~k~VILaaG~~~s--p~lL 302 (587)
T 1gpe_A 236 WLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGT----NKAVN-------FDVFAKHEVLLAAGSAIS--PLIL 302 (587)
T ss_dssp HTTTTTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEE----ETTEE-------EEEEEEEEEEECSCTTTH--HHHH
T ss_pred HHHHhhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEe----CCCcE-------EEEEecccEEEccCCCCC--HHHH
Confidence 343444456899999999999998753 4788998763 23432 57889 999999999774 3343
Q ss_pred HHcCC
Q 007716 293 KNFKL 297 (592)
Q Consensus 293 ~~~~l 297 (592)
...|+
T Consensus 303 ~~SGI 307 (587)
T 1gpe_A 303 EYSGI 307 (587)
T ss_dssp HHTTE
T ss_pred HhCCC
Confidence 34444
No 246
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.01 E-value=8.7e-06 Score=88.31 Aligned_cols=36 Identities=17% Similarity=0.245 Sum_probs=32.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
.+..|||||||+||+++|..|++. +++|+|||+.+.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~------~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTK------KYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTT------TCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhC------CCcEEEECCCCC
Confidence 356799999999999999999887 999999998763
No 247
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.00 E-value=3.5e-05 Score=83.23 Aligned_cols=105 Identities=19% Similarity=0.178 Sum_probs=77.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||||+.|+.+|..|++. |.+|+++++...... +
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~l~~-------------------~---------------- 223 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGI------GLDTTVMMRSIPLRG-------------------F---------------- 223 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCSSTT-------------------S----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCceEEEEcCccccc-------------------C----------------
Confidence 34699999999999999999999 999999997532110 0
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
+ .++.+.+.+.+++.||++++++.+.++...+++.+ .|.+.+. .+|+.
T Consensus 224 -----------d-------------~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~---~~g~~---- 271 (488)
T 3dgz_A 224 -----------D-------------QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDH---ASGKE---- 271 (488)
T ss_dssp -----------C-------------HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEET---TTTEE----
T ss_pred -----------C-------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeC---CCCee----
Confidence 0 35666778888889999999999999987554544 3554430 11221
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 007716 267 QRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~v 287 (592)
.++.+|.||.|+|..+..
T Consensus 272 ---~~~~~D~vi~a~G~~p~~ 289 (488)
T 3dgz_A 272 ---DTGTFDTVLWAIGRVPET 289 (488)
T ss_dssp ---EEEEESEEEECSCEEESC
T ss_pred ---EEEECCEEEEcccCCccc
Confidence 368999999999977653
No 248
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.00 E-value=1.2e-05 Score=85.78 Aligned_cols=95 Identities=14% Similarity=0.122 Sum_probs=73.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
...|+|||||+.|+.+|..+++. |.+|+|+|+.+.+... +.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~ll~~------------------~d--------------- 187 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYER------GLHPTLIHRSDKINKL------------------MD--------------- 187 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCEEEEEESSSCCSTT------------------SC---------------
T ss_pred CcEEEEECCccchhhhHHHHHhc------CCcceeeeeecccccc------------------cc---------------
Confidence 35799999999999999999999 9999999988754210 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
.++.+.+.+.+++.||++++++.|+++.. . .|.+.+
T Consensus 188 -------------------------~~~~~~~~~~l~~~gV~i~~~~~v~~~~~---~---~v~~~~------------- 223 (437)
T 4eqs_A 188 -------------------------ADMNQPILDELDKREIPYRLNEEINAING---N---EITFKS------------- 223 (437)
T ss_dssp -------------------------GGGGHHHHHHHHHTTCCEEESCCEEEEET---T---EEEETT-------------
T ss_pred -------------------------chhHHHHHHHhhccceEEEeccEEEEecC---C---eeeecC-------------
Confidence 12344567777889999999999987642 1 255554
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 007716 267 QRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~ 286 (592)
|+++.+|.||.|.|..+.
T Consensus 224 --g~~~~~D~vl~a~G~~Pn 241 (437)
T 4eqs_A 224 --GKVEHYDMIIEGVGTHPN 241 (437)
T ss_dssp --SCEEECSEEEECCCEEES
T ss_pred --CeEEeeeeEEEEeceecC
Confidence 678999999999997765
No 249
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.98 E-value=4.4e-06 Score=90.52 Aligned_cols=41 Identities=39% Similarity=0.579 Sum_probs=37.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~ 152 (592)
+.+||+|||||++||++|+.|++. |++|+|+|+.+.+|+.+
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~------g~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIH------GLNVTVFEAEGKAGGKL 52 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTT------SCEEEEECSSSSSCSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC------CCcEEEEEeCCCCCCce
Confidence 468999999999999999999998 99999999999998864
No 250
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.97 E-value=3.5e-05 Score=78.25 Aligned_cols=98 Identities=17% Similarity=0.162 Sum_probs=73.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
...|+|||+|+.|+.+|..|++. |.+|+++++...+..
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~------g~~v~~v~~~~~~~~------------------------------------ 210 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKY------GSKVFMLVRKDHLRA------------------------------------ 210 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTT------SSEEEEECSSSSCCS------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhc------CCEEEEEEcCCccCC------------------------------------
Confidence 35699999999999999999998 999999998764311
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHc-CCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~-Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
...+.+.+.+. ||++++++.++++..++ +.+.+|++.+. .+|+
T Consensus 211 ----------------------------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~-~~~~~v~~~~~---~~g~---- 254 (338)
T 3itj_A 211 ----------------------------STIMQKRAEKNEKIEILYNTVALEAKGDG-KLLNALRIKNT---KKNE---- 254 (338)
T ss_dssp ----------------------------CHHHHHHHHHCTTEEEECSEEEEEEEESS-SSEEEEEEEET---TTTE----
T ss_pred ----------------------------CHHHHHHHHhcCCeEEeecceeEEEEccc-CcEEEEEEEEC---CCCc----
Confidence 01133444444 99999999999998776 55667777641 2232
Q ss_pred cccceEEEcCEEEEecCCCC
Q 007716 266 FQRGVELRGRITLLAEGCRG 285 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s 285 (592)
+.++.+|.||.|+|..+
T Consensus 255 ---~~~i~~D~vi~a~G~~p 271 (338)
T 3itj_A 255 ---ETDLPVSGLFYAIGHTP 271 (338)
T ss_dssp ---EEEEECSEEEECSCEEE
T ss_pred ---eEEEEeCEEEEEeCCCC
Confidence 47899999999999654
No 251
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.96 E-value=3.8e-05 Score=81.95 Aligned_cols=107 Identities=22% Similarity=0.329 Sum_probs=80.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcEE
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~~ 187 (592)
.+|+|||||+.|+.+|..|++. |.+|+++|+.+.+.... ++
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~~-----~~---------------------------- 189 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQ------GKNVTMIVRGERVLRRS-----FD---------------------------- 189 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSTTTTT-----SC----------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCeEEEEEcCCccchhh-----cC----------------------------
Confidence 4799999999999999999999 99999999877432100 00
Q ss_pred EeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccc
Q 007716 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (592)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~ 267 (592)
..+.+.+.+.+++. |++++++.+.++..++ .+..|.+.
T Consensus 190 ------------------------~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~--~v~~v~~~--------------- 227 (449)
T 3kd9_A 190 ------------------------KEVTDILEEKLKKH-VNLRLQEITMKIEGEE--RVEKVVTD--------------- 227 (449)
T ss_dssp ------------------------HHHHHHHHHHHTTT-SEEEESCCEEEEECSS--SCCEEEET---------------
T ss_pred ------------------------HHHHHHHHHHHHhC-cEEEeCCeEEEEeccC--cEEEEEeC---------------
Confidence 35666777777778 9999999999987543 33334332
Q ss_pred cceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 007716 268 RGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (592)
Q Consensus 268 ~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~ 298 (592)
|.++.+|.||+|+|..+.. .+.+..+++
T Consensus 228 -g~~i~~D~Vv~a~G~~p~~--~l~~~~gl~ 255 (449)
T 3kd9_A 228 -AGEYKAELVILATGIKPNI--ELAKQLGVR 255 (449)
T ss_dssp -TEEEECSEEEECSCEEECC--HHHHHTTCC
T ss_pred -CCEEECCEEEEeeCCccCH--HHHHhCCcc
Confidence 4789999999999998764 345566665
No 252
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.94 E-value=2.7e-05 Score=84.37 Aligned_cols=108 Identities=18% Similarity=0.266 Sum_probs=74.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhc--------CCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeee
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREK--------NVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRV 179 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~--------~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~ 179 (592)
..++|||||+.|+.+|..|+....+. ..+.+|+|+|..+.+-. .+.
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~------------------~~~-------- 271 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLN------------------MFE-------- 271 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSST------------------TSC--------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccccc------------------CCC--------
Confidence 46999999999999999987642110 01468999998775321 000
Q ss_pred eccCCcEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCC
Q 007716 180 PVSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKD 259 (592)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~ 259 (592)
..+.+.+.+.+++.||+|++++.|++++. ++.+..+... |
T Consensus 272 --------------------------------~~~~~~~~~~L~~~GV~v~~~~~v~~v~~--~~~~~~~~~~------d 311 (502)
T 4g6h_A 272 --------------------------------KKLSSYAQSHLENTSIKVHLRTAVAKVEE--KQLLAKTKHE------D 311 (502)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTCEEETTEEEEEECS--SEEEEEEECT------T
T ss_pred --------------------------------HHHHHHHHHHHHhcceeeecCceEEEEeC--CceEEEEEec------C
Confidence 36677788888899999999999998753 2333233332 3
Q ss_pred CCcccccccceEEEcCEEEEecCCCCc
Q 007716 260 GSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 260 G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|+. .+.++.+|.||.|+|..+.
T Consensus 312 g~~-----~~~~i~ad~viwa~Gv~~~ 333 (502)
T 4g6h_A 312 GKI-----TEETIPYGTLIWATGNKAR 333 (502)
T ss_dssp SCE-----EEEEEECSEEEECCCEECC
T ss_pred ccc-----ceeeeccCEEEEccCCcCC
Confidence 432 1357999999999997654
No 253
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.88 E-value=8.5e-06 Score=85.26 Aligned_cols=40 Identities=23% Similarity=0.424 Sum_probs=37.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcc
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~ 152 (592)
++||+|||||++|+++|+.|++. |.+|+|+|+++.+|+++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~------g~~v~v~E~~~~~GG~~ 42 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK------GHQVHIIDQRDHIGGNS 42 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT------TCEEEEEESSSSSSGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHC------CCcEEEEEecCCcCCcc
Confidence 47999999999999999999998 99999999999998865
No 254
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.87 E-value=9.9e-06 Score=87.48 Aligned_cols=42 Identities=36% Similarity=0.535 Sum_probs=38.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCC-CcEEEEcCCCCCCCccc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVD-LSVCVVEKGAEVGAHII 153 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g-~~V~vlEk~~~~g~~~~ 153 (592)
+.+||+|||||++||++|+.|++. | .+|+|+|+.+.+|+.+.
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~------g~~~v~v~E~~~~~GG~~~ 50 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTEL------GYKNWHLYECNDTPGGLSR 50 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHT------TCCSEEEEESSSSSSGGGC
T ss_pred cCCCEEEECcCHHHHHHHHHHHHc------CCCCEEEEeCCCCCCCeee
Confidence 468999999999999999999998 8 79999999998988664
No 255
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.87 E-value=9.6e-06 Score=87.76 Aligned_cols=42 Identities=45% Similarity=0.510 Sum_probs=38.4
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcc
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~ 152 (592)
...+||+|||||++||++|+.|++. |.+|+|+|+.+.+|+.+
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~------g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGA------GHQVTVLEASERPGGRV 72 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHH------TCEEEEECSSSSSBTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC------CCeEEEEECCCCCCCce
Confidence 3468999999999999999999999 99999999999888864
No 256
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.84 E-value=6.8e-05 Score=75.43 Aligned_cols=99 Identities=18% Similarity=0.204 Sum_probs=71.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
...|+|||+|+.|+.+|..|++. |.+|+++++.+.+.. .
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~--------~--------------------------- 181 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANI------CKKVYLIHRRDGFRC--------A--------------------------- 181 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTT------SSEEEEECSSSSCCS--------C---------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhc------CCEEEEEeeCCccCC--------C---------------------------
Confidence 46799999999999999999998 999999998764310 0
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHH-HcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAE-ELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~-~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
.. +.+.+. +.||++++++.++++..++ +.+.+|.+.+ ..+|+.
T Consensus 182 -------------------------~~----~~~~l~~~~gv~v~~~~~v~~i~~~~-~~v~~v~~~~---~~~g~~--- 225 (311)
T 2q0l_A 182 -------------------------PI----TLEHAKNNDKIEFLTPYVVEEIKGDA-SGVSSLSIKN---TATNEK--- 225 (311)
T ss_dssp -------------------------HH----HHHHHHTCTTEEEETTEEEEEEEEET-TEEEEEEEEE---TTTCCE---
T ss_pred -------------------------HH----HHHHHhhCCCeEEEeCCEEEEEECCC-CcEeEEEEEe---cCCCce---
Confidence 01 223333 3699999999999998764 4455666642 012321
Q ss_pred cccceEEEcCEEEEecCCCCc
Q 007716 266 FQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~ 286 (592)
.++.+|.||.|+|..+.
T Consensus 226 ----~~i~~D~vi~a~G~~p~ 242 (311)
T 2q0l_A 226 ----RELVVPGFFIFVGYDVN 242 (311)
T ss_dssp ----EEEECSEEEECSCEEEC
T ss_pred ----EEEecCEEEEEecCccC
Confidence 47999999999996543
No 257
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.83 E-value=0.00014 Score=73.11 Aligned_cols=108 Identities=19% Similarity=0.195 Sum_probs=76.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
...|+|||+|+.|+.+|..|++. +.+|+++++.+.+...
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~------g~~v~~~~~~~~~~~~----------------------------------- 192 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSY------STKVYLIHRRDTFKAQ----------------------------------- 192 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH------SSEEEEECSSSSCCSC-----------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHh------CCeEEEEEeCCCCCcC-----------------------------------
Confidence 46799999999999999999999 9999999987643210
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHH-HcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAE-ELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~-~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
.. +.+.+. +.||++++++.++++..+ +.+.+|++.+. .+|+.
T Consensus 193 -------------------------~~----~~~~~~~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~---~~g~~--- 235 (323)
T 3f8d_A 193 -------------------------PI----YVETVKKKPNVEFVLNSVVKEIKGD--KVVKQVVVENL---KTGEI--- 235 (323)
T ss_dssp -------------------------HH----HHHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEET---TTCCE---
T ss_pred -------------------------HH----HHHHHHhCCCcEEEeCCEEEEEecc--CceeEEEEEEC---CCCce---
Confidence 01 223333 359999999999999865 34556776541 22331
Q ss_pred cccceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 007716 266 FQRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~ 298 (592)
.++.+|.||.|+|..+.. .+.+..++.
T Consensus 236 ----~~~~~D~vv~a~G~~p~~--~~~~~~g~~ 262 (323)
T 3f8d_A 236 ----KELNVNGVFIEIGFDPPT--DFAKSNGIE 262 (323)
T ss_dssp ----EEEECSEEEECCCEECCH--HHHHHTTCC
T ss_pred ----EEEEcCEEEEEECCCCCh--hHHhhcCee
Confidence 479999999999987753 344444443
No 258
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.80 E-value=6.8e-05 Score=76.22 Aligned_cols=101 Identities=14% Similarity=0.187 Sum_probs=72.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||+|..|+.+|..|++. |.+|+++++.+.+..
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~------g~~V~lv~~~~~~~~------------------------------------ 196 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKY------GSKVYIIHRRDAFRA------------------------------------ 196 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT------SSEEEEECSSSSCCS------------------------------------
T ss_pred CCeEEEECCChHHHHHHHHHHhc------CCeEEEEecCCcCCc------------------------------------
Confidence 35799999999999999999998 999999998764310
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCC-cEEEEEeccCcccCCCCcccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADN-KVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g-~v~~V~~~d~g~~~~G~~~~~ 265 (592)
. ..+. .+.+++.||++++++.++++..++++ .+.+|.+.+ ..+|+
T Consensus 197 -----------------------~-~~~~---~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~---~~~g~---- 242 (333)
T 1vdc_A 197 -----------------------S-KIMQ---QRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKN---VVTGD---- 242 (333)
T ss_dssp -----------------------C-HHHH---HHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEE---TTTCC----
T ss_pred -----------------------c-HHHH---HHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEe---cCCCc----
Confidence 0 0111 12234579999999999999876531 565666653 11232
Q ss_pred cccceEEEcCEEEEecCCCCc
Q 007716 266 FQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~ 286 (592)
+.++.+|.||.|+|..+.
T Consensus 243 ---~~~i~~D~vi~a~G~~p~ 260 (333)
T 1vdc_A 243 ---VSDLKVSGLFFAIGHEPA 260 (333)
T ss_dssp ---EEEEECSEEEECSCEEES
T ss_pred ---eEEEecCEEEEEeCCccc
Confidence 268999999999996543
No 259
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.79 E-value=8.6e-05 Score=75.27 Aligned_cols=98 Identities=20% Similarity=0.229 Sum_probs=70.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||+|..|+.+|..|++. |.+|+++++.+.+.. .
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~--------~--------------------------- 190 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKF------ADEVTVIHRRDTLRA--------N--------------------------- 190 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTT------CSEEEEECSSSSCCS--------C---------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhc------CCEEEEEeCCCcCCc--------c---------------------------
Confidence 35799999999999999999998 999999998764311 0
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHH-cCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~-~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
.. +.+.+.+ .||++++++.++++..+ +.+.+|.+.+ ..+|+.
T Consensus 191 -------------------------~~----~~~~l~~~~gv~i~~~~~v~~i~~~--~~v~~v~~~~---~~~g~~--- 233 (325)
T 2q7v_A 191 -------------------------KV----AQARAFANPKMKFIWDTAVEEIQGA--DSVSGVKLRN---LKTGEV--- 233 (325)
T ss_dssp -------------------------HH----HHHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEE---TTTCCE---
T ss_pred -------------------------hH----HHHHHHhcCCceEecCCceEEEccC--CcEEEEEEEE---CCCCcE---
Confidence 01 2223333 59999999999999864 4565677653 013321
Q ss_pred cccceEEEcCEEEEecCCCCc
Q 007716 266 FQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~ 286 (592)
.++.+|.||.|+|..+.
T Consensus 234 ----~~i~~D~vi~a~G~~p~ 250 (325)
T 2q7v_A 234 ----SELATDGVFIFIGHVPN 250 (325)
T ss_dssp ----EEEECSEEEECSCEEES
T ss_pred ----EEEEcCEEEEccCCCCC
Confidence 47999999999996543
No 260
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.78 E-value=0.00013 Score=79.37 Aligned_cols=103 Identities=17% Similarity=0.234 Sum_probs=73.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcEE
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~~ 187 (592)
-.|+|||||..|+.+|..|++. |.+|+|+++...... +.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~------G~~Vtlv~~~~~l~~-------------------~d---------------- 249 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGI------GLDVTVMVRSILLRG-------------------FD---------------- 249 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCSSTT-------------------SC----------------
T ss_pred CeEEEECCcHHHHHHHHHHHHc------CCeEEEEeccccccc-------------------CC----------------
Confidence 4699999999999999999999 999999997421110 00
Q ss_pred EeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCC---CcEEEEEeccCcccCCCCccc
Q 007716 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDAD---NKVIGIGTNDMGIAKDGSKKE 264 (592)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~---g~v~~V~~~d~g~~~~G~~~~ 264 (592)
.++.+.+.+.+++.||++++++.++++...++ +.+ .|.+.+ .+|..
T Consensus 250 ------------------------~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~-~v~~~~----~~g~~-- 298 (519)
T 3qfa_A 250 ------------------------QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRL-RVVAQS----TNSEE-- 298 (519)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEE-EEEEEE----SSSSC--
T ss_pred ------------------------HHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceE-EEEEEE----CCCcE--
Confidence 35666777888889999999998888865432 222 343322 12211
Q ss_pred ccccceEEEcCEEEEecCCCCc
Q 007716 265 NFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 265 ~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
..++.+|.||.|+|..+.
T Consensus 299 ----~~~~~~D~vi~a~G~~p~ 316 (519)
T 3qfa_A 299 ----IIEGEYNTVMLAIGRDAC 316 (519)
T ss_dssp ----EEEEEESEEEECSCEEES
T ss_pred ----EEEEECCEEEEecCCccc
Confidence 146789999999997654
No 261
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.78 E-value=0.0001 Score=75.98 Aligned_cols=105 Identities=15% Similarity=0.268 Sum_probs=71.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcEE
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~~ 187 (592)
..|+|||+|..|+.+|..|++. |.+|+++++.+.+... .+..
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~------g~~V~lv~~~~~~~~~-----------------~~d~--------------- 208 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKN------GSDIALYTSTTGLNDP-----------------DADP--------------- 208 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT------TCEEEEECC---------------------------C---------------
T ss_pred CEEEEECCCcCHHHHHHHHHhc------CCeEEEEecCCCCCCC-----------------CCCC---------------
Confidence 4799999999999999999998 9999999987643210 0000
Q ss_pred EeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcC-CEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELG-VEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~G-v~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
.+.++ ..+.+.+.+.+++.| |++++++.|.++..++ +. ..|.+.+
T Consensus 209 ------~~~~~-------------~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~-~~-~~v~~~~------------- 254 (369)
T 3d1c_A 209 ------SVRLS-------------PYTRQRLGNVIKQGARIEMNVHYTVKDIDFNN-GQ-YHISFDS------------- 254 (369)
T ss_dssp ------TTSCC-------------HHHHHHHHHHHHTTCCEEEECSCCEEEEEEET-TE-EEEEESS-------------
T ss_pred ------CccCC-------------HHHHHHHHHHHhhCCcEEEecCcEEEEEEecC-Cc-eEEEecC-------------
Confidence 00000 245566777777787 9999999999987654 32 3466654
Q ss_pred ccceEEE-cCEEEEecCCCCc
Q 007716 267 QRGVELR-GRITLLAEGCRGS 286 (592)
Q Consensus 267 ~~g~~i~-a~~vI~A~G~~s~ 286 (592)
|.++. +|.||.|+|..+.
T Consensus 255 --g~~~~~~d~vi~a~G~~~~ 273 (369)
T 3d1c_A 255 --GQSVHTPHEPILATGFDAT 273 (369)
T ss_dssp --SCCEEESSCCEECCCBCGG
T ss_pred --CeEeccCCceEEeeccCCc
Confidence 44454 6999999998765
No 262
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.77 E-value=0.00012 Score=73.42 Aligned_cols=98 Identities=19% Similarity=0.244 Sum_probs=72.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
...|+|||+|+.|+.+|..|++. +.+|+++++.+.+.. .
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~------g~~v~~~~~~~~~~~--------~--------------------------- 185 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANI------CSKIYLIHRRDEFRA--------A--------------------------- 185 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTT------SSEEEEECSSSSCBS--------C---------------------------
T ss_pred cCEEEEECCCHHHHHHHHHHHhh------CCEEEEEEeCCCCCC--------C---------------------------
Confidence 35799999999999999999998 999999998764311 0
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+ +.+..++.||++++++.+.++..++ +.+.+|++.. .+|+.
T Consensus 186 -------------------------~~~---~~~~~~~~gv~~~~~~~v~~i~~~~-~~~~~v~~~~----~~g~~---- 228 (315)
T 3r9u_A 186 -------------------------PST---VEKVKKNEKIELITSASVDEVYGDK-MGVAGVKVKL----KDGSI---- 228 (315)
T ss_dssp -------------------------HHH---HHHHHHCTTEEEECSCEEEEEEEET-TEEEEEEEEC----TTSCE----
T ss_pred -------------------------HHH---HHHHHhcCCeEEEeCcEEEEEEcCC-CcEEEEEEEc----CCCCe----
Confidence 011 1222346799999999999998765 5666676652 23432
Q ss_pred ccceEEEcCEEEEecCCCC
Q 007716 267 QRGVELRGRITLLAEGCRG 285 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s 285 (592)
.++.+|.||.|+|..+
T Consensus 229 ---~~~~~D~vv~a~G~~p 244 (315)
T 3r9u_A 229 ---RDLNVPGIFTFVGLNV 244 (315)
T ss_dssp ---EEECCSCEEECSCEEE
T ss_pred ---EEeecCeEEEEEcCCC
Confidence 4899999999999654
No 263
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.75 E-value=0.00016 Score=77.21 Aligned_cols=38 Identities=16% Similarity=0.323 Sum_probs=33.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEV 148 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~ 148 (592)
..+|+|||||..|+-+|..|++. .++.+|+++++...+
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~----~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDS----YPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH----CTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhc----CCCCeEEEEEeCCCC
Confidence 46799999999999999999986 357899999998754
No 264
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.75 E-value=0.00012 Score=79.57 Aligned_cols=98 Identities=24% Similarity=0.299 Sum_probs=72.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-+|+|||||..|+.+|..|++. +.+|+++++.+.+..
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~------g~~Vtlv~~~~~l~~------------------------------------ 392 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGI------VEHVTLLEFAPEMKA------------------------------------ 392 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHH------BSEEEEECSSSSCCS------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhh------CCEEEEEEeCcccCc------------------------------------
Confidence 35799999999999999999999 999999998764311
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHH-cCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~-~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
. ..+.+.+++ .||++++++.++++..++ +.+.+|.+.+. .+|+.
T Consensus 393 -------------------~---------~~l~~~l~~~~gV~v~~~~~v~~i~~~~-~~v~~v~~~~~---~~g~~--- 437 (521)
T 1hyu_A 393 -------------------D---------QVLQDKVRSLKNVDIILNAQTTEVKGDG-SKVVGLEYRDR---VSGDI--- 437 (521)
T ss_dssp -------------------C---------HHHHHHHTTCTTEEEECSEEEEEEEECS-SSEEEEEEEET---TTCCE---
T ss_pred -------------------C---------HHHHHHHhcCCCcEEEeCCEEEEEEcCC-CcEEEEEEEeC---CCCce---
Confidence 0 113344445 589999999999998654 56767777541 22332
Q ss_pred cccceEEEcCEEEEecCCCC
Q 007716 266 FQRGVELRGRITLLAEGCRG 285 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s 285 (592)
.++.+|.||+|+|..+
T Consensus 438 ----~~i~~D~vi~a~G~~p 453 (521)
T 1hyu_A 438 ----HSVALAGIFVQIGLLP 453 (521)
T ss_dssp ----EEEECSEEEECCCEEE
T ss_pred ----EEEEcCEEEECcCCCC
Confidence 5789999999999543
No 265
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.70 E-value=0.00024 Score=78.74 Aligned_cols=102 Identities=23% Similarity=0.220 Sum_probs=69.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcEE
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~~ 187 (592)
-.|+|||||..|+.+|..|++. |.+|+|+++. .+.. + ++
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~-~~l~----~--~d---------------------------- 325 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASL------GGDVTVMVRS-ILLR----G--FD---------------------------- 325 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-CSST----T--SC----------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHc------CCEEEEEECC-cCcC----c--CC----------------------------
Confidence 4699999999999999999999 9999999986 2210 0 00
Q ss_pred EeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEc-----CC---CcEEEEEeccCcccCC
Q 007716 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYD-----AD---NKVIGIGTNDMGIAKD 259 (592)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~-----~~---g~v~~V~~~d~g~~~~ 259 (592)
..+.+.+.+.+++.||++++++.++++... ++ +.+ .|.... .+
T Consensus 326 ------------------------~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~-~v~~~~----~~ 376 (598)
T 2x8g_A 326 ------------------------QQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLL-LVKGHY----TD 376 (598)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEE-EEEEEE----TT
T ss_pred ------------------------HHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceE-EEEEEe----CC
Confidence 244455667777889999999988887542 11 322 232211 12
Q ss_pred CCcccccccceEEEcCEEEEecCCCCc
Q 007716 260 GSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 260 G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|+. .++.+|.||.|+|..+.
T Consensus 377 g~~-------~~~~~D~vi~a~G~~p~ 396 (598)
T 2x8g_A 377 GKK-------FEEEFETVIFAVGREPQ 396 (598)
T ss_dssp SCE-------EEEEESEEEECSCEEEC
T ss_pred CcE-------EeccCCEEEEEeCCccc
Confidence 221 23459999999997764
No 266
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.69 E-value=2.5e-05 Score=83.91 Aligned_cols=41 Identities=32% Similarity=0.600 Sum_probs=36.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCCCCCCcc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAEVGAHI 152 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~~~g~~~ 152 (592)
..+||+|||||++||++|+.|++. |+ +|+|+|+.+.+|+.+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~------g~~~v~~~e~~~~~gg~~ 44 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEA------GITDLLILEATDHIGGRM 44 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHT------TCCCEEEECSSSSSBTTS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhc------CCCceEEEeCCCCCCCce
Confidence 358999999999999999999998 98 899999998888764
No 267
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.68 E-value=4.1e-05 Score=79.00 Aligned_cols=36 Identities=36% Similarity=0.352 Sum_probs=33.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG 149 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g 149 (592)
+||+|||||+||+.||+.|++. |++|+|+|+++..+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~------G~~V~liE~~~~~~ 37 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL------GVPVRLFEMRPKRM 37 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEECCTTTSC
T ss_pred CCEEEECchHHHHHHHHHHHHC------CCcEEEEeccCCcC
Confidence 6899999999999999999999 99999999987433
No 268
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.64 E-value=2.7e-05 Score=81.45 Aligned_cols=86 Identities=19% Similarity=0.214 Sum_probs=68.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcEE
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~~ 187 (592)
.+|+|||||..|+.+|..|++. |.+|+|+|+.+.+.... ++
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~------g~~Vtvv~~~~~~l~~~-----~~---------------------------- 187 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDS------GTPASIGIILEYPLERQ-----LD---------------------------- 187 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH------TCCEEEECSSSSSCTTT-----SC----------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCeEEEEEcCCccchhh-----cC----------------------------
Confidence 5799999999999999999999 99999999987543210 00
Q ss_pred EeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccc
Q 007716 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (592)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~ 267 (592)
..+.+.+.+.+++.||++++++.++++
T Consensus 188 ------------------------~~~~~~~~~~l~~~gV~~~~~~~v~~i----------------------------- 214 (385)
T 3klj_A 188 ------------------------RDGGLFLKDKLDRLGIKIYTNSNFEEM----------------------------- 214 (385)
T ss_dssp ------------------------HHHHHHHHHHHHTTTCEEECSCCGGGC-----------------------------
T ss_pred ------------------------HHHHHHHHHHHHhCCCEEEeCCEEEEc-----------------------------
Confidence 355666777788899999999877544
Q ss_pred cceEEEcCEEEEecCCCCc
Q 007716 268 RGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 268 ~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++.+|.||.|+|..+.
T Consensus 215 -g~~~~~D~vv~a~G~~p~ 232 (385)
T 3klj_A 215 -GDLIRSSCVITAVGVKPN 232 (385)
T ss_dssp -HHHHHHSEEEECCCEEEC
T ss_pred -CeEEecCeEEECcCcccC
Confidence 146789999999998765
No 269
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.64 E-value=0.00015 Score=73.26 Aligned_cols=98 Identities=16% Similarity=0.227 Sum_probs=72.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
...|+|||+|..|+.+|..|++. +.+|+++++.+.+...
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~------~~~v~~~~~~~~~~~~----------------------------------- 192 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPI------AKEVSIIHRRDKFRAH----------------------------------- 192 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTT------BSEEEEECSSSSCSSC-----------------------------------
T ss_pred CCEEEEECCCHhHHHHHHHHHhh------CCeEEEEEecCcCCcc-----------------------------------
Confidence 35799999999999999999998 9999999987643210
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
.. ..+.+++.||+++.++.+.++..+++ +.+|.+.+ ..+|+
T Consensus 193 -------------------------~~----~~~~l~~~gv~~~~~~~v~~i~~~~~--~~~v~~~~---~~~g~----- 233 (332)
T 3lzw_A 193 -------------------------EH----SVENLHASKVNVLTPFVPAELIGEDK--IEQLVLEE---VKGDR----- 233 (332)
T ss_dssp -------------------------HH----HHHHHHHSSCEEETTEEEEEEECSSS--CCEEEEEE---TTSCC-----
T ss_pred -------------------------HH----HHHHHhcCCeEEEeCceeeEEecCCc--eEEEEEEe---cCCCc-----
Confidence 00 12235668999999999999987653 44566654 12232
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 007716 267 QRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~ 286 (592)
+.++.+|.||.|+|..+.
T Consensus 234 --~~~~~~D~vv~a~G~~p~ 251 (332)
T 3lzw_A 234 --KEILEIDDLIVNYGFVSS 251 (332)
T ss_dssp --EEEEECSEEEECCCEECC
T ss_pred --eEEEECCEEEEeeccCCC
Confidence 478999999999996553
No 270
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.61 E-value=0.00028 Score=75.50 Aligned_cols=149 Identities=19% Similarity=0.198 Sum_probs=81.5
Q ss_pred cccEEEECCCHHHHHHHHHHH--------------------HhhhhcCCCC-cEEEEcCCCCCCCcccccCccChHHHHH
Q 007716 107 AYDVVIVGAGPAGLSAAIRLK--------------------QLCREKNVDL-SVCVVEKGAEVGAHIISGNVFEPRALNE 165 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La--------------------~~~~~~~~g~-~V~vlEk~~~~g~~~~~g~~i~~~~l~~ 165 (592)
.-.|+|||+|..|+-+|..|+ +. +. +|+|++++..+.. .+.+..+.+
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~------g~~~V~lv~r~~~~~~------~ft~~el~~ 212 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQS------RVKTVWIVGRRGPLQV------AFTIKELRE 212 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTC------CCCEEEEECSSCGGGC------CCCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhC------CCcEEEEEEcCChHhh------ccCHHHHHH
Confidence 357999999999999999999 44 77 6999998764321 223333433
Q ss_pred h--hHhhhhcCCCeeeeccCCcEEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHH--------------cCCEE
Q 007716 166 L--LPQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEE--------------LGVEI 229 (592)
Q Consensus 166 l--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~--------------~Gv~i 229 (592)
+ +|... ..+....+.. ....++. . .-.+..+.+.|.+.+++ .||++
T Consensus 213 l~~lp~~~-------~~~~~~~~~~----~~~~~~~----~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~ 274 (460)
T 1cjc_A 213 MIQLPGTR-------PMLDPADFLG----LQDRIKE----A---ARPRKRLMELLLRTATEKPGVEEAARRASASRAWGL 274 (460)
T ss_dssp HHTCTTEE-------EECCGGGGTT----HHHHTTT----S---CHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEE
T ss_pred hhcCCCce-------eEechhhhcc----hhhhhhh----c---cHHHHHHHHHHHHHHHhccccccccCCCCCCceEEE
Confidence 3 11100 0000000000 0000000 0 00123355666666655 78999
Q ss_pred ecCceEEEEEEcCCC-cEEEEEeccCcccCC-CCcccccccc--eEEEcCEEEEecCCCCc
Q 007716 230 YPGFAASEILYDADN-KVIGIGTNDMGIAKD-GSKKENFQRG--VELRGRITLLAEGCRGS 286 (592)
Q Consensus 230 ~~g~~v~~i~~~~~g-~v~~V~~~d~g~~~~-G~~~~~f~~g--~~i~a~~vI~A~G~~s~ 286 (592)
++++.+++|..++++ .+.+|++.++....+ |.. ....+| .++.+|.||.|.|.++.
T Consensus 275 ~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~-~~~~~g~~~~i~~d~Vi~a~G~~p~ 334 (460)
T 1cjc_A 275 RFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEAT-RAVPTGDVEDLPCGLVLSSIGYKSR 334 (460)
T ss_dssp ECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGC-EEEEEEEEEEEECSEEEECCCEECC
T ss_pred ECCCChheEEcCCCCceEEEEEEEEEEEccccCCC-cccCCCceEEEEcCEEEECCCCCCC
Confidence 999999999866435 676676643111000 000 000012 68999999999996553
No 271
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.61 E-value=0.00018 Score=77.04 Aligned_cols=104 Identities=23% Similarity=0.258 Sum_probs=74.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
.-.|+|||||+.|+.+|..|++. |.+|+++|+.+.+.... ++
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~~-----~d--------------------------- 213 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLM------GVQTHIIEMLDRALITL-----ED--------------------------- 213 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTTS-----CC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCEEEEEEeCCcCCCCC-----CC---------------------------
Confidence 35799999999999999999999 99999999876432100 00
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
.++.+.+.+.++ |++++++.++++..++++.+ .|.+.+ .+|+.
T Consensus 214 -------------------------~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~~v-~v~~~~----~~G~~---- 256 (466)
T 3l8k_A 214 -------------------------QDIVNTLLSILK---LNIKFNSPVTEVKKIKDDEY-EVIYST----KDGSK---- 256 (466)
T ss_dssp -------------------------HHHHHHHHHHHC---CCEECSCCEEEEEEEETTEE-EEEECC----TTSCC----
T ss_pred -------------------------HHHHHHHHhcCE---EEEEECCEEEEEEEcCCCcE-EEEEEe----cCCce----
Confidence 234444444433 99999999999987652333 365542 13432
Q ss_pred ccceEEEcCEEEEecCCCCcch
Q 007716 267 QRGVELRGRITLLAEGCRGSLS 288 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~vr 288 (592)
.++.+|.||+|+|.++...
T Consensus 257 ---~~i~~D~vi~a~G~~p~~~ 275 (466)
T 3l8k_A 257 ---KSIFTNSVVLAAGRRPVIP 275 (466)
T ss_dssp ---EEEEESCEEECCCEEECCC
T ss_pred ---EEEEcCEEEECcCCCcccc
Confidence 4899999999999887643
No 272
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.55 E-value=0.00029 Score=82.89 Aligned_cols=110 Identities=16% Similarity=0.204 Sum_probs=75.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
-+|+|||||..|+-+|..|++. |. +|+|+++.+.. +++...
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~------G~~~Vtvv~r~~~~-----------------~~~~~~--------------- 374 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRC------GARRVFLVFRKGFV-----------------NIRAVP--------------- 374 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHT------TCSEEEEECSSCGG-----------------GCCSCH---------------
T ss_pred CcEEEECCChHHHHHHHHHHHc------CCCEEEEEEecChh-----------------hCCCCH---------------
Confidence 3799999999999999999998 96 89999987520 000000
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
.++ +.+++.||++++++.++++..+ ++.+.+|++.++..+.+|.....-
T Consensus 375 -------------------------~e~-----~~~~~~Gv~~~~~~~~~~i~~~-~g~v~~v~~~~~~~~~~g~~~~~~ 423 (1025)
T 1gte_A 375 -------------------------EEV-----ELAKEEKCEFLPFLSPRKVIVK-GGRIVAVQFVRTEQDETGKWNEDE 423 (1025)
T ss_dssp -------------------------HHH-----HHHHHTTCEEECSEEEEEEEEE-TTEEEEEEEEEEEECTTSCEEEEE
T ss_pred -------------------------HHH-----HHHHHcCCEEEeCCCceEEEcc-CCeEEEEEEEEeEEcCCCCcccCC
Confidence 111 3456689999999999998765 367777776543333344311000
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 007716 267 QRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~ 286 (592)
....++.||.||+|.|..+.
T Consensus 424 g~~~~i~aD~Vi~A~G~~~~ 443 (1025)
T 1gte_A 424 DQIVHLKADVVISAFGSVLR 443 (1025)
T ss_dssp EEEEEEECSEEEECSCEECC
T ss_pred CceEEEECCEEEECCCCCCC
Confidence 01247899999999998654
No 273
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.49 E-value=0.00012 Score=74.52 Aligned_cols=98 Identities=18% Similarity=0.274 Sum_probs=69.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
...|+|||+|..|+.+|..|++. |.+|+++++.+.+...
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~------g~~V~l~~~~~~~~~~----------------------------------- 193 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRF------ARSVTLVHRRDEFRAS----------------------------------- 193 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTT------CSEEEEECSSSSCSSC-----------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHh------CCeEEEEEcCCcCCcc-----------------------------------
Confidence 45799999999999999999998 9999999987542100
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+. .+..++.||++++++.++++..++ .+.+|.+.+ ..+|+
T Consensus 194 -------------------------~~~~---~~~~~~~gV~v~~~~~v~~i~~~~--~~~~v~~~~---~~~g~----- 235 (335)
T 2a87_A 194 -------------------------KIML---DRARNNDKIRFLTNHTVVAVDGDT--TVTGLRVRD---TNTGA----- 235 (335)
T ss_dssp -------------------------TTHH---HHHHHCTTEEEECSEEEEEEECSS--SCCEEEEEE---ETTSC-----
T ss_pred -------------------------HHHH---HHHhccCCcEEEeCceeEEEecCC--cEeEEEEEE---cCCCc-----
Confidence 0111 112245799999999999987654 233455542 01232
Q ss_pred ccceEEEcCEEEEecCCCC
Q 007716 267 QRGVELRGRITLLAEGCRG 285 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s 285 (592)
+.++.+|.||.|+|..+
T Consensus 236 --~~~i~~D~vi~a~G~~p 252 (335)
T 2a87_A 236 --ETTLPVTGVFVAIGHEP 252 (335)
T ss_dssp --CEEECCSCEEECSCEEE
T ss_pred --eEEeecCEEEEccCCcc
Confidence 26899999999999654
No 274
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.49 E-value=6.8e-05 Score=84.12 Aligned_cols=40 Identities=33% Similarity=0.580 Sum_probs=36.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH 151 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~ 151 (592)
..+||+|||||++||++|+.|++. |++|+|+|+.+.+|+.
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~------g~~v~~~e~~~~~gg~ 145 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSF------GMDVTLLEARDRVGGR 145 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHT------TCEEEEECSSSSSBTT
T ss_pred CCCeEEEECcCHHHHHHHHHHHHC------CCeEEEEecCCCCCCc
Confidence 458999999999999999999998 9999999999888774
No 275
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.47 E-value=7.2e-05 Score=81.96 Aligned_cols=68 Identities=15% Similarity=0.229 Sum_probs=47.4
Q ss_pred HHHHHHH-cCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEE---EcCEEEEecCCCCcchHHHHH
Q 007716 218 LGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVEL---RGRITLLAEGCRGSLSEKLIK 293 (592)
Q Consensus 218 L~~~a~~-~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i---~a~~vI~A~G~~s~vr~~l~~ 293 (592)
+.+.+.+ .|++|++++.|++|..++ +++++|++.+ .++|+. .++ .+|.||+|+|+... .+++.
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~~~-~~~~gV~~~~---~~~g~~-------~~~~v~~~~~VIlaaG~~~s--p~lL~ 267 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVRNG-SQILGVQTND---PTLGPN-------GFIPVTPKGRVILSAGAFGT--SRILF 267 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEEET-TEEEEEEESC---TTSSGG-------GEEEEEEEEEEEECSHHHHH--HHHHH
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEEeC-CEEEEEEEEe---cCCCce-------eEEEEEeCCEEEEcCChhcC--HHHHH
Confidence 4455554 589999999999999875 6788999865 123432 233 78999999998653 34544
Q ss_pred HcCCC
Q 007716 294 NFKLR 298 (592)
Q Consensus 294 ~~~l~ 298 (592)
..|+.
T Consensus 268 ~sGig 272 (546)
T 1kdg_A 268 QSGIG 272 (546)
T ss_dssp HTTBS
T ss_pred HcCCC
Confidence 45554
No 276
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.47 E-value=0.00013 Score=78.03 Aligned_cols=110 Identities=19% Similarity=0.219 Sum_probs=72.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
.-+|+|||||..|+-+|..+.+. |. +|++++++....- +.+
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~------Ga~~Vtiv~r~~~~~~-----------------p~~--------------- 305 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQ------GATSVKCLYRRDRKNM-----------------PGS--------------- 305 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHT------TCSEEEEECSSCSTTC-----------------SSC---------------
T ss_pred CCEEEEECCChhHHHHHHHHHHc------CCCEEEEEEeCCccCC-----------------CCC---------------
Confidence 45799999999999999999998 88 4999998764210 000
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCc---ccCCCCc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMG---IAKDGSK 262 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g---~~~~G~~ 262 (592)
..+ .+.+++.||++++++.++++..+ +.+.+|++.++. .+.+|..
T Consensus 306 -------------------------~~e-----~~~~~~~Gv~~~~~~~~~~i~~~--g~v~~v~~~~~~~~~~d~~G~~ 353 (456)
T 2vdc_G 306 -------------------------QRE-----VAHAEEEGVEFIWQAAPEGFTGD--TVVTGVRAVRIHLGVADATGRQ 353 (456)
T ss_dssp -------------------------HHH-----HHHHHHTTCEEECCSSSCCEEEE--EEEETTEEEEEEEEEEEECTTC
T ss_pred -------------------------HHH-----HHHHHHCCCEEEeCCCceEEeCC--CcEEEEEEEEEEecccCCcCCc
Confidence 011 23456689999999999888742 545444443211 1133432
Q ss_pred ccccccc--eEEEcCEEEEecCCCCc
Q 007716 263 KENFQRG--VELRGRITLLAEGCRGS 286 (592)
Q Consensus 263 ~~~f~~g--~~i~a~~vI~A~G~~s~ 286 (592)
.....+| .++.+|.||+|.|..+.
T Consensus 354 ~~~~~~g~~~~i~aD~Vi~A~G~~p~ 379 (456)
T 2vdc_G 354 TPQVIEGSEFTVQADLVIKALGFEPE 379 (456)
T ss_dssp CEEEEEEEEEEEECSEEEECSCEECC
T ss_pred cccccCCcEEEEECCEEEECCCCCCC
Confidence 2222123 57899999999997664
No 277
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.44 E-value=0.00017 Score=71.71 Aligned_cols=87 Identities=15% Similarity=0.064 Sum_probs=66.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
...|+|||+|+.|+.+|..|++. | +|+++++....
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~------g-~v~~v~~~~~~-------------------------------------- 175 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDW------G-ETTFFTNGIVE-------------------------------------- 175 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGT------S-EEEEECTTTCC--------------------------------------
T ss_pred CCEEEEEecCccHHHHHHHhhhc------C-cEEEEECCCCC--------------------------------------
Confidence 45799999999999999999998 8 99999876420
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
+...+.+.+++.||+++. +.++++..++ .|.+.+
T Consensus 176 ---------------------------~~~~~~~~l~~~gv~i~~-~~v~~i~~~~-----~v~~~~------------- 209 (297)
T 3fbs_A 176 ---------------------------PDADQHALLAARGVRVET-TRIREIAGHA-----DVVLAD------------- 209 (297)
T ss_dssp ---------------------------CCHHHHHHHHHTTCEEEC-SCEEEEETTE-----EEEETT-------------
T ss_pred ---------------------------CCHHHHHHHHHCCcEEEc-ceeeeeecCC-----eEEeCC-------------
Confidence 001134556678999995 8888876432 466655
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 007716 267 QRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++.+|.||.|+|..+.
T Consensus 210 --g~~~~~D~vi~a~G~~p~ 227 (297)
T 3fbs_A 210 --GRSIALAGLFTQPKLRIT 227 (297)
T ss_dssp --SCEEEESEEEECCEEECC
T ss_pred --CCEEEEEEEEEccCcccC
Confidence 678999999999997653
No 278
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.43 E-value=9.9e-05 Score=84.59 Aligned_cols=40 Identities=33% Similarity=0.580 Sum_probs=36.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCc
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH 151 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~ 151 (592)
..+||+|||||++||++|+.|++. |++|+|+|+...+|+.
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~------g~~v~v~E~~~~~GG~ 316 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSF------GMDVTLLEARDRVGGR 316 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC------CCcEEEEEecCcCCCc
Confidence 357999999999999999999999 9999999999888874
No 279
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.32 E-value=0.00037 Score=81.40 Aligned_cols=98 Identities=13% Similarity=0.204 Sum_probs=73.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcEE
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~~ 187 (592)
-.|+|||+|+.|+.+|..|++. |.+|+|+|+.+.+..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~------G~~Vtvv~~~~~~~~------------------------------------- 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAAT------GGVVAVIDARSSISA------------------------------------- 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGG------TCCSEEEESCSSCCH-------------------------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHHc------CCcEEEEECCCccch-------------------------------------
Confidence 4699999999999999999999 999999998763210
Q ss_pred EeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccC---CCCccc
Q 007716 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAK---DGSKKE 264 (592)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~---~G~~~~ 264 (592)
. .+.+++.||+|++++.++++..++++.+.+|++.++ +. +|+
T Consensus 322 -------------------------~-----~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~--~~~~~~G~--- 366 (965)
T 2gag_A 322 -------------------------A-----AAQAVADGVQVISGSVVVDTEADENGELSAIVVAEL--DEARELGG--- 366 (965)
T ss_dssp -------------------------H-----HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEE--CTTCCEEE---
T ss_pred -------------------------h-----HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEec--cccCCCCc---
Confidence 1 234567899999999999998742355666766531 01 121
Q ss_pred ccccceEEEcCEEEEecCCCCcc
Q 007716 265 NFQRGVELRGRITLLAEGCRGSL 287 (592)
Q Consensus 265 ~f~~g~~i~a~~vI~A~G~~s~v 287 (592)
+.++.+|.||+|.|..+.+
T Consensus 367 ----~~~i~~D~Vv~a~G~~P~~ 385 (965)
T 2gag_A 367 ----TQRFEADVLAVAGGFNPVV 385 (965)
T ss_dssp ----EEEEECSEEEEECCEEECC
T ss_pred ----eEEEEcCEEEECCCcCcCh
Confidence 2689999999999988764
No 280
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.26 E-value=0.0013 Score=65.98 Aligned_cols=100 Identities=15% Similarity=0.159 Sum_probs=67.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCcE
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 186 (592)
...|+|||||..|+.+|..|++. |.+|+|+|+.......
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~------G~~Vt~v~~~~~~~~~----------------------------------- 190 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKY------GSKVIILHRRDAFRAS----------------------------------- 190 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTT------SSEEEEECSSSSCCSC-----------------------------------
T ss_pred CCeEEEECCChHHHHHHHHHHHh------CCeeeeeccccccccc-----------------------------------
Confidence 35799999999999999999999 9999999976532110
Q ss_pred EEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCccccc
Q 007716 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (592)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f 266 (592)
..+ ..+.....+++.+....+.++...+ ....++...+. ..+
T Consensus 191 -------------------------~~~---~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~---~~~------ 232 (314)
T 4a5l_A 191 -------------------------KTM---QERVLNHPKIEVIWNSELVELEGDG-DLLNGAKIHNL---VSG------ 232 (314)
T ss_dssp -------------------------HHH---HHHHHTCTTEEEECSEEEEEEEESS-SSEEEEEEEET---TTC------
T ss_pred -------------------------chh---hhhhhcccceeeEeeeeeEEEEeee-eccceeEEeec---ccc------
Confidence 011 1122233567777788887777655 33445554431 112
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 007716 267 QRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 267 ~~g~~i~a~~vI~A~G~~s~ 286 (592)
++.++.+|.||+|.|..+.
T Consensus 233 -~~~~i~~d~vi~a~G~~pn 251 (314)
T 4a5l_A 233 -EYKVVPVAGLFYAIGHSPN 251 (314)
T ss_dssp -CEEEEECSEEEECSCEEES
T ss_pred -cceeeccccceEecccccC
Confidence 2578999999999996543
No 281
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.19 E-value=0.00014 Score=79.42 Aligned_cols=66 Identities=12% Similarity=0.177 Sum_probs=45.6
Q ss_pred HHHHHHcCCEEecCceEEEEEEcCC--CcEEEEEeccCcccCCCCcccccccceEE---EcCEEEEecCCCCcchHHHHH
Q 007716 219 GGKAEELGVEIYPGFAASEILYDAD--NKVIGIGTNDMGIAKDGSKKENFQRGVEL---RGRITLLAEGCRGSLSEKLIK 293 (592)
Q Consensus 219 ~~~a~~~Gv~i~~g~~v~~i~~~~~--g~v~~V~~~d~g~~~~G~~~~~f~~g~~i---~a~~vI~A~G~~s~vr~~l~~ 293 (592)
...+++.|++|++++.|++|..+++ ++++||.+.+ .+|+. .++ .++.||+|+|+..+ .+|+.
T Consensus 201 ~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~----~~g~~-------~~~~v~a~k~VILaaGa~~s--p~lL~ 267 (536)
T 1ju2_A 201 LNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRD----SNGTP-------HQAFVRSKGEVIVSAGTIGT--PQLLL 267 (536)
T ss_dssp GGGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEEC----TTSCE-------EEEEEEEEEEEEECCHHHHH--HHHHH
T ss_pred hhhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEe----CCCce-------EEEEeccCCEEEEcCcccCC--HHHHH
Confidence 3345567899999999999998763 4788998864 23432 345 57899999998753 34443
Q ss_pred HcCC
Q 007716 294 NFKL 297 (592)
Q Consensus 294 ~~~l 297 (592)
..|+
T Consensus 268 ~SGi 271 (536)
T 1ju2_A 268 LSGV 271 (536)
T ss_dssp HTTE
T ss_pred HcCC
Confidence 3443
No 282
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.18 E-value=0.00066 Score=72.50 Aligned_cols=70 Identities=24% Similarity=0.213 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHH------cCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCC--Ccccccccc--eEEEcCEEEEecC
Q 007716 213 QLVRWLGGKAEE------LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDG--SKKENFQRG--VELRGRITLLAEG 282 (592)
Q Consensus 213 ~l~~~L~~~a~~------~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G--~~~~~f~~g--~~i~a~~vI~A~G 282 (592)
.+.+.|.+.+++ .||++++++.++++..+ +.+.+|++.+...+.+| .... ..+| .++.+|.||.|.|
T Consensus 247 ~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~--~~v~~v~~~~~~~~~~~~~~~~~-~~~g~~~~i~~d~vi~a~G 323 (456)
T 1lqt_A 247 QNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGK--RKVERIVLGRNELVSDGSGRVAA-KDTGEREELPAQLVVRSVG 323 (456)
T ss_dssp HHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECS--SSCCEEEEEEEEEEECSSSSEEE-EEEEEEEEEECSEEEECSC
T ss_pred HHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecC--CcEeEEEEEEEEecCCCcccccc-cCCCceEEEEcCEEEEccc
Confidence 345566666666 78999999999998754 44445555421000011 0000 0013 5799999999999
Q ss_pred CCC
Q 007716 283 CRG 285 (592)
Q Consensus 283 ~~s 285 (592)
..+
T Consensus 324 ~~p 326 (456)
T 1lqt_A 324 YRG 326 (456)
T ss_dssp EEC
T ss_pred ccc
Confidence 654
No 283
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.11 E-value=0.00033 Score=75.85 Aligned_cols=61 Identities=25% Similarity=0.241 Sum_probs=44.1
Q ss_pred HHHHHHHcC-CEEecCceEEEEEEcCCC-cEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 218 LGGKAEELG-VEIYPGFAASEILYDADN-KVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 218 L~~~a~~~G-v~i~~g~~v~~i~~~~~g-~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
+...+++.| ++|++++.|++|+.++++ ++++|++.+ .+|... ...+++|+.||+|.|+...
T Consensus 227 ~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~----~~g~~~----~~~~v~A~~VIlaaG~~~s 289 (504)
T 1n4w_A 227 YLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKD----TDGKLL----ATKEISCRYLFLGAGSLGS 289 (504)
T ss_dssp HHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEEC----TTCCEE----EEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC----CCCccc----eeEEEeeCEEEEccCCCCC
Confidence 345556665 999999999999998644 788998753 233100 0157899999999998765
No 284
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.10 E-value=0.00021 Score=79.85 Aligned_cols=36 Identities=31% Similarity=0.575 Sum_probs=33.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCC--------CcEEEEcCCC-CC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVD--------LSVCVVEKGA-EV 148 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g--------~~V~vlEk~~-~~ 148 (592)
..+|+|||||++||++|+.|++. | ++|+|+|+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~------g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRL------AATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH------HTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CcccccCCCceEEEEeccCccc
Confidence 46899999999999999999998 7 9999999998 88
No 285
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.03 E-value=0.00043 Score=75.03 Aligned_cols=61 Identities=13% Similarity=0.160 Sum_probs=43.7
Q ss_pred HHHHHHHcC-CEEecCceEEEEEEcCCC-cEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 218 LGGKAEELG-VEIYPGFAASEILYDADN-KVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 218 L~~~a~~~G-v~i~~g~~v~~i~~~~~g-~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
+...+++.| ++|++++.|++|+.++++ ++++|++.+ .+|..+ ...+++|+.||+|.|+...
T Consensus 232 ~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~----~~g~~~----~~~~~~A~~VIlaaGa~~s 294 (507)
T 1coy_A 232 YLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQID----EQGNVV----ATKVVTADRVFFAAGSVGT 294 (507)
T ss_dssp HHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEEC----TTSCEE----EEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC----CCCccc----ccEEEEeCEEEEccCccCC
Confidence 344455554 999999999999998755 688998753 233200 0157899999999998754
No 286
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.00 E-value=0.00063 Score=75.09 Aligned_cols=43 Identities=19% Similarity=0.241 Sum_probs=39.8
Q ss_pred ccccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcc
Q 007716 104 ESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (592)
Q Consensus 104 ~~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~ 152 (592)
+.++|||+|||+|..|...|..|++. |.+|++|||++..|+.+
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~------g~~vl~id~~~~~gg~~ 47 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRS------GQRVLHVDSRSYYGGNW 47 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCGGG
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhC------CCEEEEEcCCCcccCcc
Confidence 45689999999999999999999999 99999999999999864
No 287
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.00 E-value=0.002 Score=70.42 Aligned_cols=35 Identities=14% Similarity=0.259 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
..+|+|||+|..|+.+|..|++. +.+|+|+++.+.
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~------~~~Vtv~~r~~~ 219 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAET------AKELYVFQRTPN 219 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTT------BSEEEEEESSCC
T ss_pred CCeEEEECCCccHHHHHHHHHhh------CCEEEEEEcCCC
Confidence 45799999999999999999998 999999999875
No 288
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.96 E-value=0.0027 Score=69.28 Aligned_cols=35 Identities=17% Similarity=0.234 Sum_probs=32.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
..+|+|||+|..|+.+|..|++. +.+|+|+++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~------~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPE------VEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT------CSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhh------CCEEEEEECCCC
Confidence 45799999999999999999998 999999999875
No 289
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.95 E-value=0.0082 Score=60.08 Aligned_cols=35 Identities=17% Similarity=0.373 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEV 148 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~ 148 (592)
-.|+|||||+.|+.+|..|++. |.+|+|+|+.+.+
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKF------ADKVTIVHRRDEL 180 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT------CSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhc------CCEEEEEeccccc
Confidence 4799999999999999999999 9999999987653
No 290
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.85 E-value=0.0032 Score=65.90 Aligned_cols=53 Identities=21% Similarity=0.292 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 213 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 213 ~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
.+.+.+.+.+++.||++++++.|+++..+ +|.+.| |.++.+|.||+|+|..+.
T Consensus 219 ~~~~~~~~~l~~~gV~~~~~~~v~~i~~~------~v~~~~---------------g~~~~~D~vi~a~G~~~~ 271 (409)
T 3h8l_A 219 NSRKAVASIYNQLGIKLVHNFKIKEIREH------EIVDEK---------------GNTIPADITILLPPYTGN 271 (409)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEECSS------EEEETT---------------SCEEECSEEEEECCEECC
T ss_pred HHHHHHHHHHHHCCCEEEcCCceEEECCC------eEEECC---------------CCEEeeeEEEECCCCCcc
Confidence 55666777788899999999999887532 256554 678999999999997654
No 291
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.72 E-value=0.0037 Score=66.83 Aligned_cols=35 Identities=9% Similarity=0.031 Sum_probs=31.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
.-.|+|||+|.+|+-+|..|++. |.+|+++++++.
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~------g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKY------GAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHT------TCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHh------CCeEEEEEECCC
Confidence 45799999999999999999999 999999998764
No 292
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.71 E-value=0.0024 Score=72.27 Aligned_cols=34 Identities=24% Similarity=0.100 Sum_probs=31.2
Q ss_pred cccEEEEC--CCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVG--AGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVG--aG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
.-.|+||| ||..|+.+|..|++. |.+|+|+++.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~------G~~Vtlv~~~~ 563 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATA------GHEVTIVSGVH 563 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHT------TCEEEEEESSC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHc------CCEEEEEeccc
Confidence 35799998 999999999999999 99999999876
No 293
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.66 E-value=0.007 Score=66.10 Aligned_cols=35 Identities=17% Similarity=0.352 Sum_probs=32.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
...|+|||+|..|+.+|..|++. +.+|+|+++.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~------~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQ------AEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH------BSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhh------CCEEEEEECCCC
Confidence 45799999999999999999999 999999999875
No 294
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.60 E-value=0.0022 Score=68.11 Aligned_cols=34 Identities=15% Similarity=0.194 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCc-EEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLS-VCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~-V~vlEk~~ 146 (592)
..+|+|||+|.+|+-.|..|++. +.+ |+|+++..
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~------~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPV------AKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTT------SCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHH------hCCcEEEEeCCC
Confidence 45799999999999999999998 888 99999875
No 295
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.57 E-value=0.0032 Score=70.62 Aligned_cols=53 Identities=17% Similarity=0.172 Sum_probs=37.0
Q ss_pred HHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 216 RWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 216 ~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
..+.+.+++.||++++++.++++. +++ + .+. .+ |+ ..++.+|.||.|+|..+.
T Consensus 577 ~~~~~~l~~~GV~v~~~~~v~~i~--~~~-v-~~~-~~------G~-------~~~i~~D~Vi~a~G~~p~ 629 (671)
T 1ps9_A 577 WIHRTTLLSRGVKMIPGVSYQKID--DDG-L-HVV-IN------GE-------TQVLAVDNVVICAGQEPN 629 (671)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEEE--TTE-E-EEE-ET------TE-------EEEECCSEEEECCCEEEC
T ss_pred HHHHHHHHhcCCEEEeCcEEEEEe--CCe-E-EEe-cC------Ce-------EEEEeCCEEEECCCcccc
Confidence 345666778899999999999886 223 2 232 22 21 167999999999996653
No 296
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.54 E-value=0.0042 Score=65.58 Aligned_cols=56 Identities=18% Similarity=0.229 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 214 LVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 214 l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
+...+.+.+++.||++++++.|++++.+ + |++.+ .++ +|.++.+|.||.|.|..+.
T Consensus 202 ~~~~l~~~l~~~GV~i~~~~~v~~v~~~--~----v~~~~----~~~-------~g~~i~~D~vv~a~G~~~~ 257 (430)
T 3h28_A 202 SKRLVEDLFAERNIDWIANVAVKAIEPD--K----VIYED----LNG-------NTHEVPAKFTMFMPSFQGP 257 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECSS--E----EEEEC----TTS-------CEEEEECSEEEEECEEECC
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeCC--e----EEEEe----cCC-------CceEEeeeEEEECCCCccc
Confidence 3455677778899999999999988532 2 33332 112 2578999999999997653
No 297
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=96.44 E-value=0.0041 Score=62.21 Aligned_cols=91 Identities=5% Similarity=0.099 Sum_probs=63.1
Q ss_pred cccEEEECCCH-HHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 107 AYDVVIVGAGP-AGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 107 ~~DVvIVGaG~-aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
..+++|||||. +++.+|..+++. +.+|+++++...+.
T Consensus 146 ~~~~~VIggG~~~~~e~a~~~~~~------~~~v~i~~~~~~~~------------------------------------ 183 (304)
T 4fk1_A 146 DQPLIIISENEDHTLHMTKLVYNW------STDLVIATNGNELS------------------------------------ 183 (304)
T ss_dssp TSCEEEECCSHHHHHHHHHHHTTT------CSCEEEECSSCCCC------------------------------------
T ss_pred CCceeeecCCCchhhhHHHHHHhC------CceEEEEeccccch------------------------------------
Confidence 34688888875 567888888887 99999998754321
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
.. +.+.+++.|++++.+. +..+..++ +.+.+|++.+
T Consensus 184 --------------------------~~----~~~~l~~~g~~~~~~~-v~~~~~~~-~~~~~v~~~~------------ 219 (304)
T 4fk1_A 184 --------------------------QT----IMDELSNKNIPVITES-IRTLQGEG-GYLKKVEFHS------------ 219 (304)
T ss_dssp --------------------------HH----HHHHHHTTTCCEECSC-EEEEESGG-GCCCEEEETT------------
T ss_pred --------------------------hh----hhhhhhccceeEeeee-EEEeecCC-Ceeeeeeccc------------
Confidence 01 2344556788888764 66665443 5666787765
Q ss_pred cccceEEEcCEEEEecCCCCc
Q 007716 266 FQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s~ 286 (592)
|.++.++.+|++.|.+..
T Consensus 220 ---g~~i~~~~~vi~~g~~~~ 237 (304)
T 4fk1_A 220 ---GLRIERAGGFIVPTFFRP 237 (304)
T ss_dssp ---SCEECCCEEEECCEEECS
T ss_pred ---cceeeecceeeeeccccC
Confidence 678899999988887654
No 298
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.26 E-value=0.0056 Score=62.07 Aligned_cols=33 Identities=15% Similarity=0.318 Sum_probs=29.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
.-+|+|||+|..|+.+|..|++. + +|+++++..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~------~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTV------A-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT------S-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhh------C-CEEEEECCC
Confidence 35799999999999999999998 7 699999874
No 299
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.20 E-value=0.0095 Score=62.97 Aligned_cols=60 Identities=15% Similarity=0.252 Sum_probs=39.1
Q ss_pred HHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 215 VRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 215 ~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
...+.+.+++.||++++++.|+++..+ + + .+...+ .+|+. .++.++.+|.||.|.|..+.
T Consensus 211 ~~~~~~~l~~~gI~~~~~~~v~~v~~~--~-v-~~~~~~----~~g~~----~~~~~i~~D~vv~~~g~~~~ 270 (437)
T 3sx6_A 211 KGILTKGLKEEGIEAYTNCKVTKVEDN--K-M-YVTQVD----EKGET----IKEMVLPVKFGMMIPAFKGV 270 (437)
T ss_dssp HHHHHHHHHHTTCEEECSEEEEEEETT--E-E-EEEEEC----TTSCE----EEEEEEECSEEEEECCEECC
T ss_pred HHHHHHHHHHCCCEEEcCCEEEEEECC--e-E-EEEecc----cCCcc----ccceEEEEeEEEEcCCCcCc
Confidence 445667777899999999999988532 2 2 122111 23321 11478999999999996543
No 300
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.47 E-value=0.042 Score=59.18 Aligned_cols=37 Identities=11% Similarity=0.320 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
...|+|||+|-+|.-.|..|++. .++.+|+++=|++.
T Consensus 246 gKrV~VVG~G~SA~ei~~~L~~~----~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 246 PYNIAVLGSGQSAAEIFHDLQKR----YPNSRTTLIMRDSA 282 (501)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH----STTCEEEEECSSSS
T ss_pred CcEEEEECCcHHHHHHHHHHHhc----CCCceEEEEeCCCc
Confidence 34699999999999999999875 23688999988763
No 301
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.63 E-value=0.03 Score=49.93 Aligned_cols=35 Identities=31% Similarity=0.274 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
...|+|||+|..|..+|..|.+. |.+|+++++...
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~------g~~V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSS------GHSVVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHH
Confidence 45799999999999999999998 999999998653
No 302
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.31 E-value=0.05 Score=47.55 Aligned_cols=37 Identities=22% Similarity=0.377 Sum_probs=32.8
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
.+.-.|+|||+|..|...|..|.+. |.+|+++|+.+.
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~------g~~v~vid~~~~ 41 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLAS------DIPLVVIETSRT 41 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHT------TCCEEEEESCHH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCHH
Confidence 3456799999999999999999998 999999998753
No 303
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=94.12 E-value=0.14 Score=53.86 Aligned_cols=56 Identities=18% Similarity=0.232 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 214 LVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 214 l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
..+.+.+..++.||++++++.|++++. +. +.+.+ .+|+ +.++.+|.||.|.|..+.
T Consensus 202 ~~~~l~~~l~~~GV~~~~~~~v~~v~~---~~---~~~~~----~~g~-------~~~i~~d~vi~~~G~~~~ 257 (430)
T 3hyw_A 202 SKRLVEDLFAERNIDWIANVAVKAIEP---DK---VIYED----LNGN-------THEVPAKFTMFMPSFQGP 257 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECS---SE---EEEEC----TTSC-------EEEEECSEEEEECEEECC
T ss_pred HHHHHHHHHHhCCeEEEeCceEEEEeC---Cc---eEEEe----eCCC-------ceEeecceEEEeccCCCc
Confidence 345566777789999999999998743 22 23322 2333 478999999999997764
No 304
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=94.05 E-value=0.079 Score=54.93 Aligned_cols=54 Identities=22% Similarity=0.228 Sum_probs=40.4
Q ss_pred HHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCc
Q 007716 216 RWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (592)
Q Consensus 216 ~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~ 286 (592)
+.+.+.+++.||+++.++.+..+..+.++. .|.+.+ |.++.+|.||.|.|..+.
T Consensus 206 ~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~--~v~~~~---------------g~~i~~D~vi~~~g~~~~ 259 (401)
T 3vrd_B 206 RLYGFGTENALIEWHPGPDAAVVKTDTEAM--TVETSF---------------GETFKAAVINLIPPQRAG 259 (401)
T ss_dssp HHSCTTSTTCSEEEECTTTTCEEEEETTTT--EEEETT---------------SCEEECSEEEECCCEEEC
T ss_pred HHHHHHHHhcCcEEEeCceEEEEEecccce--EEEcCC---------------CcEEEeeEEEEecCcCCc
Confidence 334444566899999999998888776443 366665 688999999999996543
No 305
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=93.83 E-value=0.21 Score=54.17 Aligned_cols=35 Identities=14% Similarity=0.376 Sum_probs=31.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
...|+|||+|..|+-.|..|++. +.+|+++++.+.
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~------~~~vtv~~r~~~ 220 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQ------AAELFVFQRTPH 220 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH------BSEEEEEESSCC
T ss_pred CCEEEEECCCccHHHHHHHHhhc------CceEEEEEcCCc
Confidence 45799999999999999999998 999999998764
No 306
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.61 E-value=0.15 Score=45.01 Aligned_cols=33 Identities=15% Similarity=0.260 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
-.|+|+|+|..|...|..|.+. |.+|+++|+.+
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~------g~~V~vid~~~ 36 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR------GQNVTVISNLP 36 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCCEEEEECCC
Confidence 4599999999999999999998 99999999863
No 307
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.28 E-value=0.082 Score=45.55 Aligned_cols=33 Identities=18% Similarity=0.371 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|+|||+|..|...|..|.+. |.+|+++|+..
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~------g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK------GHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCH
Confidence 4699999999999999999998 99999999754
No 308
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.16 E-value=0.083 Score=43.96 Aligned_cols=34 Identities=32% Similarity=0.473 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCC-CcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVD-LSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g-~~V~vlEk~~ 146 (592)
...|+|+|+|..|..+|..|.+. | .+|+++++..
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~------g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTS------SNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC------SSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhC------CCceEEEEeCCH
Confidence 35699999999999999999998 8 8999999864
No 309
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.87 E-value=0.1 Score=45.29 Aligned_cols=33 Identities=24% Similarity=0.467 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|+|+|+|..|..+|..|.+. |.+|+++|+.+
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~------g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA------GKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCeEEEEECCH
Confidence 3699999999999999999998 99999999864
No 310
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=92.46 E-value=0.26 Score=54.36 Aligned_cols=57 Identities=9% Similarity=0.097 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHcCCEEecCceEEEEEEcCC-CcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecC
Q 007716 211 LSQLVRWLGGKAEELGVEIYPGFAASEILYDAD-NKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEG 282 (592)
Q Consensus 211 ~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~-g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G 282 (592)
.+.|.+.|.+.++..|++|++++.|.+|..+++ |++++|++.+ |.+++||.||.+..
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~---------------Ge~i~A~~VVs~~~ 434 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQF---------------GQRIISKHFIIEDS 434 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETT---------------SCEEECSEEEEEGG
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCC---------------CCEEEcCEEEEChh
Confidence 478999999999999999999999999988765 7788888654 67899999988544
No 311
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=91.38 E-value=0.16 Score=43.74 Aligned_cols=32 Identities=22% Similarity=0.333 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
.|+|+|+|..|..+|..|.+. |.+|+++++..
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~------g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRM------GHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHT------TCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 599999999999999999998 99999999753
No 312
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.16 E-value=0.19 Score=52.11 Aligned_cols=35 Identities=29% Similarity=0.430 Sum_probs=31.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
...|+|||+|++|+.+|..|... |.+|+++|+...
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~l------Ga~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRL------GAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHC------CCEEEEEcCCHH
Confidence 46799999999999999999999 999999998763
No 313
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=90.58 E-value=0.23 Score=49.94 Aligned_cols=34 Identities=21% Similarity=0.394 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|+|||+|-.|.+.|..|++. |.+|+++.|..
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~------g~~V~~~~r~~ 35 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKT------GHCVSVVSRSD 35 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHT------TCEEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCh
Confidence 35699999999999999999998 99999999864
No 314
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=90.17 E-value=0.23 Score=50.99 Aligned_cols=34 Identities=24% Similarity=0.317 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|+|||+|.+|+.+|..|... |.+|+++|+..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~l------Ga~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRL------GAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHH------TCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 45799999999999999999999 99999999875
No 315
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=90.01 E-value=0.23 Score=46.72 Aligned_cols=32 Identities=19% Similarity=0.325 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
.|+|||+|..|...|..|.+. |.+|+++|+.+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~------g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR------KYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT------TCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCeEEEEECCH
Confidence 599999999999999999998 99999999865
No 316
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=89.75 E-value=1.8 Score=45.93 Aligned_cols=36 Identities=28% Similarity=0.266 Sum_probs=30.2
Q ss_pred CCCEEEEcCCCcccCCCCccchHHHHHHHHHHHHHHhhhccC
Q 007716 414 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 455 (592)
Q Consensus 414 ~~~v~LiGDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~ 455 (592)
.+++.++|++.+ |.|++.|+.+|..+|+.|.+.+..
T Consensus 460 ~~~l~~aG~~~~------g~~v~gai~sG~~aA~~il~~l~~ 495 (504)
T 1sez_A 460 LPGLFYAGNHRG------GLSVGKALSSGCNAADLVISYLES 495 (504)
T ss_dssp STTEEECCSSSS------CSSHHHHHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeecCC------CCCHHHHHHHHHHHHHHHHHHHhh
Confidence 479999999854 568999999999999999876543
No 317
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=89.71 E-value=0.29 Score=49.00 Aligned_cols=34 Identities=18% Similarity=0.357 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC--cEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~--~V~vlEk~~ 146 (592)
...|+|||+|-.|.+.|..|++. |. +|+++++..
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~------g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR------GIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCCh
Confidence 35799999999999999999998 88 999999764
No 318
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=89.62 E-value=0.3 Score=46.36 Aligned_cols=33 Identities=21% Similarity=0.263 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKG 145 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~ 145 (592)
...|+|||||..|...|..|.+. |.+|+|++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~------GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQE------GAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGG------CCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEECCC
Confidence 35699999999999999999999 9999999964
No 319
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=89.55 E-value=0.27 Score=49.19 Aligned_cols=34 Identities=26% Similarity=0.348 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|.|||+|-.|.+.|..|++. |.+|+++.|..
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~------g~~V~~~~r~~ 35 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRS------GEDVHFLLRRD 35 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHT------SCCEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHHC------CCeEEEEEcCc
Confidence 35699999999999999999998 99999999864
No 320
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=89.07 E-value=0.21 Score=52.94 Aligned_cols=52 Identities=25% Similarity=0.475 Sum_probs=40.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC--------CCCcccccCccChHHHHH
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE--------VGAHIISGNVFEPRALNE 165 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~--------~g~~~~~g~~i~~~~l~~ 165 (592)
+.|+|+|+|-.|...|..|.+. |.+|+|+|+.+. .+.....|..-++..|.+
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~------~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~ 63 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGE------NNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHE 63 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCST------TEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHh
Confidence 4599999999999999999988 999999998753 344445666666666644
No 321
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=88.89 E-value=0.44 Score=48.16 Aligned_cols=34 Identities=18% Similarity=0.213 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
...|+|||||..|.++|..|++. |+ +|+++|...
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~------g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALR------ELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCh
Confidence 35799999999999999999998 87 999999875
No 322
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=88.79 E-value=0.37 Score=49.75 Aligned_cols=35 Identities=31% Similarity=0.400 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
...|+|+|+|.+|+.+|..|+.. |.+|+++|+...
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~------Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRL------GAVVMATDVRAA 206 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCST
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 45799999999999999999988 999999998753
No 323
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=88.77 E-value=0.41 Score=47.49 Aligned_cols=32 Identities=22% Similarity=0.340 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
.|.|||+|..|...|..|++. |++|+++|+..
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~------G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAAT------GHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCeEEEEECCH
Confidence 599999999999999999998 99999999864
No 324
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=88.71 E-value=0.34 Score=50.41 Aligned_cols=34 Identities=29% Similarity=0.380 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|+|||+|.+|+.+|..|+.. |.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~------Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSL------GAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCH
Confidence 45799999999999999999988 99999999865
No 325
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=88.66 E-value=0.34 Score=47.93 Aligned_cols=34 Identities=26% Similarity=0.404 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|+|||+|-.|.+.|..|++. |.+|++++|..
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~------g~~V~~~~r~~ 35 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQS------LPHTTLIGRHA 35 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHH------CTTCEEEESSC
T ss_pred CcEEEEECCCHHHHHHHHHHHHC------CCeEEEEEecc
Confidence 35699999999999999999998 99999999874
No 326
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=88.65 E-value=0.45 Score=47.67 Aligned_cols=33 Identities=18% Similarity=0.348 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
..|.|||+|..|.+.|..|++. |+ +|+++|+..
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~------g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD------NLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCceEEEEeCCc
Confidence 4699999999999999999998 88 999999865
No 327
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=88.63 E-value=0.38 Score=51.88 Aligned_cols=35 Identities=11% Similarity=0.181 Sum_probs=32.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEV 148 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~ 148 (592)
-.|+|||||..|+.+|..|++. |.+|+++|+.+.+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~------G~~Vtlv~~~~~~ 249 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNAT------GRRTVMLVRTEPL 249 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHc------CCeEEEEEecCcc
Confidence 6799999999999999999999 9999999998754
No 328
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=88.62 E-value=0.45 Score=51.05 Aligned_cols=37 Identities=22% Similarity=0.302 Sum_probs=33.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCC
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEV 148 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~ 148 (592)
.++||+|||+|++|+++|.+|++. |.+|+|||++...
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~------~~~v~~~e~~~~~ 40 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEA------GVQTLMLEMGQLW 40 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC------CCcEEEEeCCCCC
Confidence 369999999999999999999998 9999999998743
No 329
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=88.51 E-value=0.38 Score=50.81 Aligned_cols=33 Identities=27% Similarity=0.484 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|.|||+|..|+..|..|++. |.+|+++++..
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~------G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL------GANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhc------CCEEEEEECCH
Confidence 4699999999999999999998 99999999875
No 330
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=88.48 E-value=0.4 Score=48.09 Aligned_cols=33 Identities=30% Similarity=0.323 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
-.|.|||||..|..-|..+++. |++|+++|..+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~------G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG------GFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhC------CCeEEEEECCH
Confidence 3599999999999999999999 99999999765
No 331
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=88.05 E-value=0.45 Score=48.80 Aligned_cols=35 Identities=34% Similarity=0.416 Sum_probs=31.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
.+..|||+|||.||..+|..|... |. +|+++|+..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~------Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAA------GATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHc------CCCeEEEEECCC
Confidence 457899999999999999999998 99 999999864
No 332
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=87.97 E-value=0.25 Score=48.42 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|+|||||..|+..|..|.+. |.+|+|++...
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~------Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPT------GCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGG------TCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhC------CCEEEEEcCCC
Confidence 35699999999999999999999 99999999653
No 333
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=87.90 E-value=0.28 Score=51.72 Aligned_cols=34 Identities=26% Similarity=0.331 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
..|+|||.|.+|+++|..|+++ |.+|++.|.+..
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~------G~~v~~~D~~~~ 39 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLAR------GVTPRVMDTRMT 39 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTT------TCCCEEEESSSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC------CCEEEEEECCCC
Confidence 3599999999999999999998 999999998764
No 334
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=87.84 E-value=0.36 Score=51.03 Aligned_cols=33 Identities=27% Similarity=0.313 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|+|||.|.+|+++|..|+++ |.+|++.|++.
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~------G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKL------GAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHT------TCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhC------CCEEEEEeCCc
Confidence 5699999999999999999999 99999999865
No 335
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=87.59 E-value=6.7 Score=43.36 Aligned_cols=36 Identities=19% Similarity=-0.002 Sum_probs=29.3
Q ss_pred CCEEEEcCCCcccCCCCccchHHHHHHHHHHHHHHhhhc
Q 007716 415 PGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVL 453 (592)
Q Consensus 415 ~~v~LiGDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~ 453 (592)
+|++++|++.+... ..-++-|+++|..+|+.|.+.+
T Consensus 623 grl~FAGe~ts~~~---~g~v~GAi~SG~raA~~i~~~~ 658 (662)
T 2z3y_A 623 PRLFFAGEHTIRNY---PATVHGALLSGLREAGRIADQF 658 (662)
T ss_dssp CCEEECSGGGCTTS---TTSHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeccccCCC---CcCHHHHHHHHHHHHHHHHHHc
Confidence 69999999976432 3458889999999999998764
No 336
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=87.58 E-value=0.57 Score=48.86 Aligned_cols=34 Identities=21% Similarity=0.322 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
..|+|||.|..|...|..|.+. |++|++||+.+.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~------g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS------GVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCCEEEEECCHH
Confidence 4599999999999999999998 999999998753
No 337
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=87.54 E-value=0.46 Score=48.60 Aligned_cols=33 Identities=30% Similarity=0.326 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|+|+|+|.+|+.+|..|+.. |.+|+++++..
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~------Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL------GAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCH
Confidence 5699999999999999999998 99999999864
No 338
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=87.51 E-value=0.52 Score=45.47 Aligned_cols=34 Identities=24% Similarity=0.351 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
...|+|||+|-.|..+|..|++. |+ +++|+|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~------Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA------GVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH------TCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc------CCCeEEEEcCCC
Confidence 46799999999999999999999 98 799999764
No 339
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=87.48 E-value=0.56 Score=47.28 Aligned_cols=34 Identities=32% Similarity=0.425 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
...|.|||||..|.+.|..|++. |+ +|+++|...
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~------g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQK------DLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCH
Confidence 35799999999999999999998 88 999999865
No 340
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=87.37 E-value=0.57 Score=46.02 Aligned_cols=33 Identities=18% Similarity=0.291 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|.|||+|..|...|..|++. |++|+++|+..
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~------G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH------GFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCH
Confidence 3599999999999999999998 99999999765
No 341
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=87.00 E-value=0.6 Score=45.63 Aligned_cols=33 Identities=15% Similarity=0.117 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
.|.|||+|..|...|..|++. |.+|+++++...
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ------GHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhC------CCCEEEEEcCcc
Confidence 489999999999999999998 999999998763
No 342
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=86.79 E-value=0.62 Score=46.50 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=29.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
..|.|||+|..|...|..|+.. |+ +|+++|...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~------g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAK------ELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCeEEEEeCCc
Confidence 4699999999999999999988 76 899999764
No 343
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=86.70 E-value=0.75 Score=49.12 Aligned_cols=60 Identities=15% Similarity=0.123 Sum_probs=44.8
Q ss_pred HHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 007716 220 GKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (592)
Q Consensus 220 ~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~~s~vr~~l~~~~~l~ 298 (592)
+.+++.||++++++.|+++..++ .+.+|.+.+ |.++.+|.||+|+|.++.. ++.+..+++
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~~--~v~~v~~~~---------------g~~i~aD~Vv~a~G~~p~~--~l~~~~g~~ 324 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGNE--KVERVIDMN---------------NHEYKVDALIFADGRRPDI--NPITQAGGK 324 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECSS--SCCEEEETT---------------CCEEECSEEEECCCEEECC--HHHHHTTCC
T ss_pred HHHHhCCcEEEeCCeeEEEecCC--ceEEEEeCC---------------CeEEEeCEEEECCCcCcCc--hHHHhcCCC
Confidence 66778899999999999987543 344566654 5789999999999988763 344444443
No 344
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=86.66 E-value=0.59 Score=46.58 Aligned_cols=33 Identities=33% Similarity=0.472 Sum_probs=29.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|+|||+|-.|.+.|..|+ . |.+|+++.|..
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~------g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-L------YHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T------TSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHh-c------CCceEEEECCH
Confidence 357999999999999999999 8 99999999864
No 345
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=86.59 E-value=0.6 Score=46.25 Aligned_cols=33 Identities=27% Similarity=0.380 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|.|||+|..|...|..|++. |.+|+++++..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG------GNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhC------CCcEEEEECCH
Confidence 3699999999999999999998 99999999764
No 346
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=86.43 E-value=0.71 Score=49.52 Aligned_cols=36 Identities=31% Similarity=0.487 Sum_probs=33.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
.+||++|||+|++|+++|.+|++. |.+|+|||++..
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~------~~~v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQA------GIPTQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCcEEEEECCCC
Confidence 469999999999999999999998 999999999863
No 347
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=86.39 E-value=0.74 Score=43.01 Aligned_cols=35 Identities=14% Similarity=0.231 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
...|.|||+|-.|.+.|..|++. |.+|+++++...
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~------g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIA------GHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT------TCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCHH
Confidence 34699999999999999999998 999999998764
No 348
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=86.30 E-value=0.65 Score=46.07 Aligned_cols=34 Identities=29% Similarity=0.359 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|.|||.|..|...|..|++. |.+|+++++..
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA------GLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC------CCeEEEEECCH
Confidence 45799999999999999999998 99999999765
No 349
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=86.23 E-value=0.61 Score=49.62 Aligned_cols=34 Identities=21% Similarity=0.450 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|.|||+|..|+..|..|++. |.+|+++++..
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~------G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI------GHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhC------CCEEEEEECCH
Confidence 35699999999999999999998 99999999865
No 350
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=86.18 E-value=0.75 Score=41.68 Aligned_cols=35 Identities=23% Similarity=0.192 Sum_probs=29.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
.-.|+|||+|..|..+|..|.+.. |.+|+++|+..
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~-----g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARY-----GKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHH-----CSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhcc-----CCeEEEEECCH
Confidence 346999999999999999998731 78999999865
No 351
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=86.15 E-value=0.65 Score=46.81 Aligned_cols=36 Identities=22% Similarity=0.238 Sum_probs=31.6
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
.|+..|.|||+|-.|.+.|..|++. |.+|+++++..
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~------G~~V~~~~r~~ 47 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHEN------GEEVILWARRK 47 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSH
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCH
Confidence 4678899999999999999999998 99999999764
No 352
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=85.91 E-value=0.73 Score=46.22 Aligned_cols=34 Identities=26% Similarity=0.337 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC--cEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~--~V~vlEk~~ 146 (592)
...|+|||+|..|.++|..|+.. ++ +++++|...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~------~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALR------QTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT------TCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCCh
Confidence 36799999999999999999998 77 899999764
No 353
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=85.67 E-value=0.73 Score=47.19 Aligned_cols=34 Identities=29% Similarity=0.418 Sum_probs=31.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCC
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKG 145 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~ 145 (592)
.+..|||+|||-+|..+|..|... |. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~------G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDL------GVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECC
Confidence 467899999999999999999998 98 79999986
No 354
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=85.66 E-value=0.82 Score=45.94 Aligned_cols=33 Identities=27% Similarity=0.333 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
..|.|||||..|.++|..|++. |+ +|+++|...
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~------g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK------NLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeCCH
Confidence 4699999999999999999998 87 899999764
No 355
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=85.55 E-value=0.68 Score=47.49 Aligned_cols=34 Identities=26% Similarity=0.370 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|+|+|+|..|+.+|..|+.. |.+|+++++..
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~------Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGM------GAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCEEEEEECCH
Confidence 35699999999999999999998 99999999764
No 356
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=85.46 E-value=0.73 Score=46.63 Aligned_cols=33 Identities=24% Similarity=0.202 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|.|||+|..|...|..|++. |.+|+++++..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~------g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK------GQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCH
Confidence 4699999999999999999998 99999999764
No 357
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=85.13 E-value=0.73 Score=47.43 Aligned_cols=34 Identities=35% Similarity=0.506 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|+|||+|..|+.+|..|+.. |.+|+++++..
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~------Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGM------GATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCH
Confidence 45699999999999999999998 99999999764
No 358
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=85.05 E-value=0.88 Score=47.70 Aligned_cols=35 Identities=17% Similarity=0.252 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
...|.|||.|..||.+|..|++. |.+|+.+|....
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~------G~~V~g~Did~~ 55 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL------GHRVVGYDVNPS 55 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCEEEEECSCHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhC------CCcEEEEECCHH
Confidence 35699999999999999999999 999999997653
No 359
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=85.05 E-value=0.82 Score=46.08 Aligned_cols=32 Identities=31% Similarity=0.447 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKG 145 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~ 145 (592)
..|.|||+|-.|.+.|..|++. |.+|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~------g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA------GEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT------TCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCEEEEEECh
Confidence 4699999999999999999998 9999999974
No 360
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=84.98 E-value=0.8 Score=45.59 Aligned_cols=32 Identities=28% Similarity=0.393 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCC--cEEEEcCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~--~V~vlEk~~ 146 (592)
.|+|||+|..|.+.|..|++. |+ +|+++|...
T Consensus 2 kI~VIGaG~vG~~la~~la~~------g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLR------GSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCCH
Confidence 589999999999999999998 88 999999764
No 361
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=84.95 E-value=0.32 Score=42.39 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=29.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|+|||+|..|...|..|++. |.+|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~------g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYP------QYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTT------TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCEEEEEcCCH
Confidence 45699999999999999999887 89999999764
No 362
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=84.83 E-value=0.62 Score=46.12 Aligned_cols=36 Identities=22% Similarity=0.261 Sum_probs=32.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
+...|.|||.|..|...|..|++. |++|+++++.+.
T Consensus 14 ~~~~I~vIG~G~mG~~~A~~l~~~------G~~V~~~dr~~~ 49 (296)
T 3qha_A 14 EQLKLGYIGLGNMGAPMATRMTEW------PGGVTVYDIRIE 49 (296)
T ss_dssp -CCCEEEECCSTTHHHHHHHHTTS------TTCEEEECSSTT
T ss_pred CCCeEEEECcCHHHHHHHHHHHHC------CCeEEEEeCCHH
Confidence 346799999999999999999998 999999998764
No 363
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=84.47 E-value=0.87 Score=45.68 Aligned_cols=33 Identities=30% Similarity=0.323 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|.|||+|.-|.+.|..|++. |++|+++|+.+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~------G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG------GFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 3599999999999999999998 99999999865
No 364
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=84.46 E-value=0.91 Score=47.77 Aligned_cols=35 Identities=23% Similarity=0.444 Sum_probs=32.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
...+.|||.|..|+.+|..|++. |.+|+++++.+.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~------G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF------GHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 46799999999999999999999 999999998875
No 365
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=84.40 E-value=0.91 Score=47.95 Aligned_cols=55 Identities=16% Similarity=0.232 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHc--------CCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccccccceEEEcCEEEEecCC
Q 007716 212 SQLVRWLGGKAEEL--------GVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGC 283 (592)
Q Consensus 212 ~~l~~~L~~~a~~~--------Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~f~~g~~i~a~~vI~A~G~ 283 (592)
..+.+.|.+.+.+. |++|+++++|++|..++++ + .|++.+ |.+++||.||+|++.
T Consensus 206 ~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~-v-~v~~~~---------------g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 206 EAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGG-V-TVKTED---------------NSVYSADYVMVSASL 268 (472)
T ss_dssp THHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSC-E-EEEETT---------------SCEEEESEEEECSCH
T ss_pred HHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCc-E-EEEECC---------------CCEEEcCEEEEecCH
Confidence 36667776665543 6789999999999987744 4 377765 578999999999995
No 366
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=83.97 E-value=1.1 Score=44.47 Aligned_cols=35 Identities=23% Similarity=0.394 Sum_probs=31.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
+...|.|||.|..|...|..|++. |++|+++++..
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~------G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQ------GKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 345799999999999999999998 99999999765
No 367
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=83.91 E-value=0.97 Score=45.08 Aligned_cols=34 Identities=21% Similarity=0.459 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
.|.|||+|..|.+.|..|++. ..+.+|+++|+..
T Consensus 2 kI~VIGaG~vG~~la~~la~~----~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK----QLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCCh
Confidence 589999999999999999984 1168999999875
No 368
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=83.57 E-value=1 Score=43.94 Aligned_cols=33 Identities=24% Similarity=0.459 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|+|+|+|-+|.++|..|++. |.+|+|+.|..
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~------G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSL------DCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHc------CCEEEEEECCH
Confidence 4699999999999999999998 99999998764
No 369
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=83.46 E-value=0.68 Score=47.26 Aligned_cols=32 Identities=28% Similarity=0.428 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
.|.|||+|-.|.+.|..|++. |.+|+++++..
T Consensus 17 kI~iIG~G~mG~~la~~L~~~------G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK------CREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT------EEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhC------CCEEEEEECCH
Confidence 799999999999999999998 99999999764
No 370
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=83.24 E-value=1.1 Score=45.65 Aligned_cols=34 Identities=24% Similarity=0.265 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|.|||+|--|.+.|..|++. |.+|+++++.+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~------G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK------GQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT------TCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHC------CCeEEEEeCCH
Confidence 35799999999999999999998 99999999864
No 371
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=83.15 E-value=1 Score=47.10 Aligned_cols=37 Identities=24% Similarity=0.328 Sum_probs=30.4
Q ss_pred ccccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 104 ESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 104 ~~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
+.....|.|||+|..|+..|..|++ |.+|+++++.+.
T Consensus 33 ~~~~mkIaVIGlG~mG~~lA~~La~-------G~~V~~~D~~~~ 69 (432)
T 3pid_A 33 GSEFMKITISGTGYVGLSNGVLIAQ-------NHEVVALDIVQA 69 (432)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHT-------TSEEEEECSCHH
T ss_pred ccCCCEEEEECcCHHHHHHHHHHHc-------CCeEEEEecCHH
Confidence 3344679999999999999999885 899999998753
No 372
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=83.04 E-value=1.2 Score=43.39 Aligned_cols=35 Identities=29% Similarity=0.446 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
...|+|+|+|-+|-++|..|++. |.+|+|+.|...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~------G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQ------GLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 45799999999999999999999 999999998753
No 373
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=82.94 E-value=0.99 Score=45.34 Aligned_cols=34 Identities=18% Similarity=0.166 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHH-HHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 108 YDVVIVGAGPAGLS-AAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 108 ~DVvIVGaG~aGl~-aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
..|.|||.|.+|++ +|..|+++ |.+|++.|+...
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~------G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEA------GFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHT------TCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhC------CCEEEEEcCCCC
Confidence 35999999999996 78888888 999999998753
No 374
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=82.85 E-value=0.74 Score=43.66 Aligned_cols=34 Identities=21% Similarity=0.258 Sum_probs=29.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
...|+|+|+|..|...|..|.+. |. |+++|+.+.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~------g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGS------EV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTS------EE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhC------Ce-EEEEECCHH
Confidence 34699999999999999999888 89 999998753
No 375
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=82.81 E-value=1.1 Score=47.48 Aligned_cols=34 Identities=32% Similarity=0.335 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|+|+|+|..|.++|..|+.. |.+|+++|+.+
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~------GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQA------GARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCH
Confidence 35699999999999999999999 99999998753
No 376
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=82.46 E-value=1 Score=44.39 Aligned_cols=34 Identities=21% Similarity=0.316 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|.|||+|..|...|..|++. |.+|+++++..
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~~ 38 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLKA------GYSLVVSDRNP 38 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSCH
T ss_pred cceEEEECchHHHHHHHHHHHhC------CCEEEEEeCCH
Confidence 34699999999999999999998 99999999764
No 377
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=82.35 E-value=1.2 Score=45.26 Aligned_cols=33 Identities=27% Similarity=0.454 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
.|+|+|||..|..+|+.+++. |++|+++|..+.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~------G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKA------GMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------TCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCCC
Confidence 499999999999999999998 999999997764
No 378
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=82.32 E-value=0.96 Score=47.47 Aligned_cols=32 Identities=25% Similarity=0.215 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
.|.|||+|..|+..|..|++. |.+|+++++..
T Consensus 2 kI~VIG~G~vG~~~A~~la~~------G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR------GHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT------TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHC------CCEEEEEECCH
Confidence 489999999999999999998 99999999864
No 379
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=82.29 E-value=1.2 Score=44.36 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
..|.|||.|..|...|..|++. |.+|+++++...
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~------G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKN------GFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHHC------CCeEEEEeCCHH
Confidence 5699999999999999999998 999999998753
No 380
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=81.85 E-value=1.1 Score=44.71 Aligned_cols=35 Identities=20% Similarity=0.174 Sum_probs=31.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCC-CcEEEEcCCC
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVD-LSVCVVEKGA 146 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g-~~V~vlEk~~ 146 (592)
|...|.|||.|..|.+.|..|++. | .+|+++++..
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~------G~~~V~~~dr~~ 58 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGR------NAARLAAYDLRF 58 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT------TCSEEEEECGGG
T ss_pred cCCeEEEECccHHHHHHHHHHHHc------CCCeEEEEeCCC
Confidence 446799999999999999999998 9 9999999875
No 381
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=81.73 E-value=1.2 Score=46.88 Aligned_cols=34 Identities=24% Similarity=0.397 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
..|.|||+|.-|...|..|++. |++|+++|+...
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a------G~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA------GIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCeEEEEECcHH
Confidence 3599999999999999999999 999999998764
No 382
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=81.47 E-value=1.5 Score=43.99 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAE 147 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~~ 147 (592)
..|.|||+|..|.+.|..|++. |+ +|+++|....
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~------~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLK------ELGDVVLFDIAEG 42 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeCCch
Confidence 4699999999999999999998 88 9999998653
No 383
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=81.39 E-value=1.2 Score=47.28 Aligned_cols=32 Identities=31% Similarity=0.502 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
.|.|||+|..|...|..|++. |++|+++|+..
T Consensus 39 kV~VIGaG~MG~~iA~~la~~------G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARV------GISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTT------TCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhC------CCeEEEEECCH
Confidence 599999999999999999998 99999999865
No 384
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=81.35 E-value=17 Score=41.37 Aligned_cols=38 Identities=18% Similarity=-0.025 Sum_probs=30.4
Q ss_pred CCEEEEcCCCcccCCCCccchHHHHHHHHHHHHHHhhhccC
Q 007716 415 PGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 455 (592)
Q Consensus 415 ~~v~LiGDAA~~~~P~~g~G~~~Am~dg~~aA~~l~~~~~~ 455 (592)
+|++++|++.+... ..-++-|+.+|..+|+.|.+.+..
T Consensus 794 grL~FAGE~Ts~~~---~gtveGAi~SG~RAA~~Il~~l~~ 831 (852)
T 2xag_A 794 PRLFFAGEHTIRNY---PATVHGALLSGLREAGRIADQFLG 831 (852)
T ss_dssp CCEEECSGGGCTTS---TTSHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcEEEEehhHhCCC---CcCHHHHHHHHHHHHHHHHHHhhC
Confidence 69999999976432 346888999999999999886643
No 385
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=81.35 E-value=1.6 Score=42.14 Aligned_cols=33 Identities=24% Similarity=0.307 Sum_probs=29.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCc-EEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLS-VCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~-V~vlEk~~ 146 (592)
..|.|||+|-.|...|..|++. |.+ |.++++..
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~------g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK------GFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHC------CCeEEEEEeCCH
Confidence 4699999999999999999998 998 89998754
No 386
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=81.23 E-value=1.4 Score=44.11 Aligned_cols=32 Identities=25% Similarity=0.390 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCC--cEEEEcCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~--~V~vlEk~~ 146 (592)
.|.|||+|-.|.+.|..|++. |+ +|+++|+..
T Consensus 2 kI~VIGaG~~G~~la~~l~~~------g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK------GFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCCCeEEEEeCCh
Confidence 489999999999999999998 88 999999764
No 387
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=81.23 E-value=1.4 Score=43.52 Aligned_cols=32 Identities=22% Similarity=0.235 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCC--cEEEEcCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~--~V~vlEk~~ 146 (592)
.|.|||+|..|.+.|..|++. ++ +|+++|+..
T Consensus 2 kI~ViGaG~vG~~la~~l~~~------~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN------LDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------SCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCCCeEEEEECCh
Confidence 589999999999999999998 87 899999764
No 388
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=81.14 E-value=1.3 Score=44.18 Aligned_cols=30 Identities=27% Similarity=0.288 Sum_probs=28.4
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEK 144 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk 144 (592)
.|.|||+|..|.+.|..|++. |.+|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~------g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN------GNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH------CCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhC------CCeEEEEEc
Confidence 489999999999999999998 999999997
No 389
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=81.13 E-value=1.3 Score=43.45 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
.|.|||.|..|...|..|++. |.+|+++++...
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKA------GCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------TCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHC------CCeEEEEcCCHH
Confidence 599999999999999999998 999999998753
No 390
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=81.09 E-value=1.3 Score=43.82 Aligned_cols=33 Identities=12% Similarity=0.234 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
..|+|||+|.+|.++|..|++. |. +|+|+.|..
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~------G~~~V~v~nR~~ 175 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLST------AAERIDMANRTV 175 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT------TCSEEEEECSSH
T ss_pred CEEEEECcHHHHHHHHHHHHHC------CCCEEEEEeCCH
Confidence 4699999999999999999998 98 899998764
No 391
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=81.07 E-value=1.3 Score=44.14 Aligned_cols=33 Identities=24% Similarity=0.301 Sum_probs=29.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|.|||+|-.|.+.|..|++. |.+|+++ +++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~------G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARA------GHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHT------TCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHC------CCeEEEE-EcH
Confidence 35699999999999999999998 9999999 653
No 392
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=80.95 E-value=1.6 Score=47.15 Aligned_cols=36 Identities=44% Similarity=0.738 Sum_probs=33.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
.+|||||||||++|+++|.+|++. |++|+|||++..
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~------g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEA------GKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCCC
Confidence 469999999999999999999998 999999999864
No 393
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=80.87 E-value=1.2 Score=46.29 Aligned_cols=34 Identities=29% Similarity=0.379 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|+|||.|..|..+|..|+.. |.+|+++|+.+
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~------Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAM------GSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC------CCEEEEEeCCh
Confidence 46799999999999999999998 99999999754
No 394
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=80.79 E-value=1.5 Score=41.88 Aligned_cols=35 Identities=20% Similarity=0.354 Sum_probs=31.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
....|.|||+|-.|.+.|..|++. |.+|+++++..
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~------G~~V~~~~r~~ 52 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADL------GHEVTIGTRDP 52 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCh
Confidence 346799999999999999999998 99999999865
No 395
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=80.47 E-value=1.6 Score=43.20 Aligned_cols=33 Identities=24% Similarity=0.363 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|.|||+|..|...|..|+ . |++|+++|+.+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a------G~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S------KHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T------TSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c------CCEEEEEECCH
Confidence 467999999999999999999 8 99999999865
No 396
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=80.43 E-value=1.7 Score=43.48 Aligned_cols=32 Identities=34% Similarity=0.492 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKG 145 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~ 145 (592)
..|.|||+|..|.+.|..|++. |+ +|+++|..
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~------g~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQK------ELADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEecc
Confidence 4699999999999999999998 88 99999976
No 397
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=80.24 E-value=1.4 Score=46.64 Aligned_cols=32 Identities=25% Similarity=0.215 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKG 145 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~ 145 (592)
..|+|||||..|...|..|.+. |.+|+|+++.
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~------ga~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEA------GARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TBEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------cCEEEEEcCC
Confidence 4699999999999999999999 9999999974
No 398
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=80.23 E-value=2.7 Score=41.50 Aligned_cols=36 Identities=19% Similarity=0.231 Sum_probs=31.0
Q ss_pred ccccEEEECC-CHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 106 MAYDVVIVGA-GPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 106 ~~~DVvIVGa-G~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
|...|+|+|| |..|...+..|.+. |.+|+++.|...
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~ 46 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKL------GHPTYVFTRPNS 46 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHT------TCCEEEEECTTC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHC------CCcEEEEECCCC
Confidence 3346999997 99999999999998 999999998763
No 399
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=80.23 E-value=1.5 Score=44.81 Aligned_cols=34 Identities=12% Similarity=0.050 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCC-------CcEEEEcCCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVD-------LSVCVVEKGAE 147 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g-------~~V~vlEk~~~ 147 (592)
..|.|||+|-.|.+.|..|++. | .+|+++++...
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~------G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTN------AKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHH------HHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHc------CCccCCCCCeEEEEECChh
Confidence 4699999999999999999998 8 89999998764
No 400
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=80.22 E-value=1.8 Score=43.44 Aligned_cols=32 Identities=28% Similarity=0.433 Sum_probs=29.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCC--cEEEEcCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKG 145 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~--~V~vlEk~ 145 (592)
..|.|||+|..|.++|..|++. |+ +++++|..
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~------~~~~~l~l~D~~ 39 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ------GITDELVVIDVN 39 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCceEEEEecc
Confidence 4699999999999999999998 87 89999974
No 401
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=80.20 E-value=1.7 Score=40.65 Aligned_cols=33 Identities=30% Similarity=0.293 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|.|||+|-.|...|..|++. |.+|+++++..
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~------g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGS------GFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 4699999999999999999998 99999999764
No 402
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=80.08 E-value=1.8 Score=43.27 Aligned_cols=32 Identities=28% Similarity=0.470 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCC--cEEEEcCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~--~V~vlEk~~ 146 (592)
.|.|||+|..|.+.|..|++. ++ +++++|...
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~------~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ------DVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------TCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCch
Confidence 489999999999999999998 77 899999865
No 403
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=79.92 E-value=1.1 Score=46.48 Aligned_cols=31 Identities=16% Similarity=0.146 Sum_probs=27.9
Q ss_pred ccEEEECCCHHHHHHHHHHHH-hhhhcCCCCcEEEEcC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQ-LCREKNVDLSVCVVEK 144 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~-~~~~~~~g~~V~vlEk 144 (592)
..|.|||+|..|.+.|..|++ . |.+|+++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~------G~~V~~~~~ 34 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRD------GVEVRVLTL 34 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTST------TEEEEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHhCC------CCEEEEEeC
Confidence 369999999999999999987 6 899999983
No 404
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=79.80 E-value=1.9 Score=43.12 Aligned_cols=33 Identities=24% Similarity=0.475 Sum_probs=29.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC--cEEEEcCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKG 145 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~--~V~vlEk~ 145 (592)
...|+|||+|..|.++|..|+.. ++ .++++|..
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~------~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQ------SIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------CSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCC
Confidence 36799999999999999999987 75 79999965
No 405
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=79.76 E-value=1.4 Score=42.72 Aligned_cols=34 Identities=9% Similarity=0.060 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|+|.|||..|...+..|.+. |.+|+++.|..
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQ------GWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGG------TCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHC------CCEEEEEEcCh
Confidence 35699999999999999999998 99999999865
No 406
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=79.72 E-value=1.7 Score=46.33 Aligned_cols=37 Identities=16% Similarity=0.346 Sum_probs=32.9
Q ss_pred cccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 105 ~~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
.|...|.|||.|..|...|..|++. |.+|+++++...
T Consensus 8 ~~~~~IgvIGlG~MG~~lA~~La~~------G~~V~v~dr~~~ 44 (497)
T 2p4q_A 8 HMSADFGLIGLAVMGQNLILNAADH------GFTVCAYNRTQS 44 (497)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSH
T ss_pred cCCCCEEEEeeHHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 3567899999999999999999998 999999998753
No 407
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=79.70 E-value=1.6 Score=43.03 Aligned_cols=34 Identities=26% Similarity=0.419 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|.|||+|..|..+|..|+.. |.+|+++++..
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~------G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAAL------GAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC------CCEEEEEECCH
Confidence 45799999999999999999998 99999999764
No 408
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=79.69 E-value=1.7 Score=43.10 Aligned_cols=33 Identities=21% Similarity=0.276 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|.|||+|..|...|..|++. |.+|+++++..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~------g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM------GHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhC------CCEEEEEeCCH
Confidence 5699999999999999999998 99999999865
No 409
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=79.63 E-value=1.9 Score=43.12 Aligned_cols=33 Identities=24% Similarity=0.268 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
..|.|||+|..|.+.|..|++. ++ +++++|...
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~------~~~~v~l~Di~~ 39 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIK------QLGDVVLFDIAQ 39 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCceEEEEeCCh
Confidence 4699999999999999999987 77 999999865
No 410
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=79.49 E-value=1.6 Score=43.11 Aligned_cols=34 Identities=24% Similarity=0.389 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|.|||+|..|..+|..|+.. |.+|+++++..
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~------G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAAL------GANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHC------CCEEEEEECCH
Confidence 45799999999999999999998 99999999764
No 411
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=79.26 E-value=1.4 Score=43.19 Aligned_cols=33 Identities=21% Similarity=0.245 Sum_probs=30.5
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
.|.|||.|..|...|..|++. |.+|+++++...
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~------G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRA------GFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHH------TCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHC------CCeEEEEcCCHH
Confidence 599999999999999999999 999999998763
No 412
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=79.15 E-value=1.7 Score=46.26 Aligned_cols=34 Identities=29% Similarity=0.334 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|+|||+|..|..+|..|+.. |.+|+++|+.+
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~------Ga~Viv~d~~~ 307 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQ------GARVSVTEIDP 307 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred cCEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 45699999999999999999988 99999999764
No 413
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=79.00 E-value=2.2 Score=40.69 Aligned_cols=33 Identities=9% Similarity=0.258 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCC----cEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL----SVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~----~V~vlEk~~ 146 (592)
..|.|||+|-.|.+.|..|.+. |+ +|+++++..
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~------g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK------NIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhC------CCCCCCeEEEEeCCH
Confidence 4699999999999999999998 88 999999864
No 414
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=78.93 E-value=2.3 Score=39.49 Aligned_cols=55 Identities=18% Similarity=0.179 Sum_probs=38.6
Q ss_pred ccEEEECC-CHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCC------CcccccCccChHHHHHhhH
Q 007716 108 YDVVIVGA-GPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG------AHIISGNVFEPRALNELLP 168 (592)
Q Consensus 108 ~DVvIVGa-G~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g------~~~~~g~~i~~~~l~~ll~ 168 (592)
..|+|.|| |..|...+..|.+. |.+|+++.|..... .....+...++..+.+++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 66 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNR------GFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCK 66 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTT------TCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHT
T ss_pred CEEEEEcCCchHHHHHHHHHHHC------CCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhc
Confidence 45999996 99999999999998 99999999875321 1112344445555555443
No 415
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=78.88 E-value=2.1 Score=42.87 Aligned_cols=33 Identities=30% Similarity=0.430 Sum_probs=29.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC--cEEEEcCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKG 145 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~--~V~vlEk~ 145 (592)
...|+|||+|..|.++|..|+.. ++ .++++|..
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~------~~~~el~L~Di~ 39 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQ------GIAEEFVIVDVV 39 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHcC------CCCCEEEEEeCC
Confidence 46799999999999999999987 65 79999974
No 416
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=78.80 E-value=1.9 Score=42.08 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|+|||+|-+|.+.|..|.+. |.+|+++++..
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~------g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKE------GAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHc------CCEEEEEECCH
Confidence 5699999999999999999998 89999999764
No 417
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=78.77 E-value=1.2 Score=41.96 Aligned_cols=33 Identities=24% Similarity=0.431 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEE-EcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCV-VEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~v-lEk~~ 146 (592)
..|.|||+|-.|.+.|..|++. |.+|++ +++..
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~------g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA------QIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT------TCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCEEEEEECCCH
Confidence 5799999999999999999998 999998 88765
No 418
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=78.77 E-value=2.1 Score=42.72 Aligned_cols=34 Identities=26% Similarity=0.307 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC--cEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~--~V~vlEk~~ 146 (592)
...|.|||.|..|.+.|..|++. |. +|+++++..
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~------G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS------GFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT------TCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC------CCCCEEEEEECCH
Confidence 35699999999999999999998 98 999999865
No 419
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=78.65 E-value=1.9 Score=43.90 Aligned_cols=34 Identities=18% Similarity=0.304 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|.|||.|..|...|..|++. |.+|+++++..
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~------G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKG------GHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhC------CCEEEEEeCCH
Confidence 35799999999999999999998 99999999875
No 420
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=78.61 E-value=1.7 Score=43.41 Aligned_cols=33 Identities=24% Similarity=0.395 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|.|||.|..|...|..|++. |.+|+++++..
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEA------GYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhC------CCeEEEEcCCH
Confidence 4699999999999999999998 99999999875
No 421
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=78.44 E-value=2.2 Score=42.62 Aligned_cols=34 Identities=24% Similarity=0.435 Sum_probs=29.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC--cEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~--~V~vlEk~~ 146 (592)
...|.|||+|..|.+.|..|++. ++ +|+++|...
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~------~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQ------GIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhC------CCCCEEEEEeCCc
Confidence 35799999999999999999887 65 799999764
No 422
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=78.43 E-value=1.4 Score=43.07 Aligned_cols=33 Identities=24% Similarity=0.334 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|+|+|+|-+|.++|..|++. |.+|+|+.|..
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~------G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQA------QQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHT------TCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHC------CCEEEEEECCH
Confidence 4699999999999999999998 99999999764
No 423
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=78.21 E-value=1.7 Score=42.62 Aligned_cols=35 Identities=23% Similarity=0.279 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAE 147 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~~ 147 (592)
...|+|+|+|-+|.++|..|++. |. +|+|+.|...
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~------G~~~v~v~~R~~~ 152 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKI------VRPTLTVANRTMS 152 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTT------CCSCCEEECSCGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHC------CCCEEEEEeCCHH
Confidence 35699999999999999999998 98 8999998753
No 424
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=78.09 E-value=1.9 Score=39.92 Aligned_cols=32 Identities=28% Similarity=0.461 Sum_probs=29.0
Q ss_pred cEEEEC-CCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 109 DVVIVG-AGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 109 DVvIVG-aG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
.|+||| +|-.|...|..|++. |.+|+++++..
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~------g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATL------GHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTT------TCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 489999 999999999999998 99999999764
No 425
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=77.93 E-value=2 Score=44.56 Aligned_cols=34 Identities=29% Similarity=0.389 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
...|+|||+|..|..+|..|+.. |. +|+++++..
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~------G~~~V~v~~r~~ 201 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDR------GVRAVLVANRTY 201 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHH------CCSEEEEECSSH
T ss_pred CCEEEEEChHHHHHHHHHHHHHC------CCCEEEEEeCCH
Confidence 35699999999999999999998 98 899998753
No 426
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=77.90 E-value=2.2 Score=42.15 Aligned_cols=33 Identities=24% Similarity=0.352 Sum_probs=30.2
Q ss_pred ccEEEEC-CCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVG-AGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVG-aG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|.||| +|-.|.+.|..|++. |.+|+++++..
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~------G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS------GYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT------TCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC------CCeEEEEECCc
Confidence 4699999 999999999999998 99999999765
No 427
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=77.84 E-value=2.2 Score=41.20 Aligned_cols=32 Identities=34% Similarity=0.488 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
.|+|||+|-+|-+++..|.+. |. +|+|+.|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~------G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM------GVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT------TCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHc------CCCEEEEEeCCH
Confidence 799999999999999999998 98 899999864
No 428
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=77.67 E-value=2 Score=42.88 Aligned_cols=34 Identities=18% Similarity=0.295 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
...|+|+|+|-+|-++|..|++. |. +|+|+.|..
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~------Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALD------GVKEISIFNRKD 188 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT------TCSEEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHHC------CCCEEEEEECCC
Confidence 35699999999999999999998 98 899998863
No 429
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=77.64 E-value=2.1 Score=42.44 Aligned_cols=32 Identities=19% Similarity=0.271 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCC--CcEEEEcCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVD--LSVCVVEKGA 146 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g--~~V~vlEk~~ 146 (592)
.|.|||+|-.|.+.|..|++. | .+|+++|+..
T Consensus 3 kI~VIGaG~~G~~la~~L~~~------g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQ------GVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCCCEEEEEcCCH
Confidence 599999999999999999998 8 6899999754
No 430
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=77.64 E-value=2.1 Score=41.97 Aligned_cols=34 Identities=29% Similarity=0.309 Sum_probs=29.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
...|+|+|+|-+|.++|..|++. |. +|+|+.|..
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~------G~~~v~i~~R~~ 161 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTH------GVQKLQVADLDT 161 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHC------CCCEEEEEECCH
Confidence 35699999999999999999998 98 699998764
No 431
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=77.64 E-value=2.2 Score=41.48 Aligned_cols=32 Identities=25% Similarity=0.257 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
.|.|||+|..|.+.|..|++. |.+|+++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR------GHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHC------CCEEEEEECCH
Confidence 489999999999999999998 99999998764
No 432
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=77.64 E-value=2.7 Score=40.28 Aligned_cols=34 Identities=12% Similarity=0.163 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCC----CcEEEEcCCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVD----LSVCVVEKGAE 147 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g----~~V~vlEk~~~ 147 (592)
..|.|||+|-.|.+.|..|++. | .+|+++++...
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~------g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA------NIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH------TSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCCCCCeEEEEeCCcc
Confidence 4699999999999999999998 8 69999998764
No 433
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=77.58 E-value=1.9 Score=42.46 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|.|||+|-.|...|..|++. |.+|+++++..
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE------GVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT------TCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHC------CCeEEEEeCCH
Confidence 4699999999999999999998 99999999764
No 434
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=77.57 E-value=1.1 Score=48.49 Aligned_cols=36 Identities=39% Similarity=0.587 Sum_probs=32.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCC
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEV 148 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~ 148 (592)
.+||+||||||+||+++|.+|++ |.+|+|||++...
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-------g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-------KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-------TSCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhc-------CCcEEEEecCCCc
Confidence 46999999999999999999997 7899999998754
No 435
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=77.54 E-value=1.9 Score=41.45 Aligned_cols=34 Identities=24% Similarity=0.425 Sum_probs=30.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
...|+|||+|-.|..+|..|++. |+ +++|+|...
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~------Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGA------GVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHT------TCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHc------CCCeEEEEeCCC
Confidence 46799999999999999999999 87 688998654
No 436
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=77.50 E-value=2.1 Score=44.05 Aligned_cols=35 Identities=23% Similarity=0.300 Sum_probs=31.4
Q ss_pred ccccEEEECC-CHHHHHHHHHHHHhhhhcCCCC---cEEEEcCCC
Q 007716 106 MAYDVVIVGA-GPAGLSAAIRLKQLCREKNVDL---SVCVVEKGA 146 (592)
Q Consensus 106 ~~~DVvIVGa-G~aGl~aA~~La~~~~~~~~g~---~V~vlEk~~ 146 (592)
....|+|||| |.+|+.|+..+..+ |+ .|+++|...
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~l------Ga~~~~V~v~D~~~ 251 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKV------GIPDANILKWDIKE 251 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHT------TCCGGGEEEECHHH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhC------CCCcCceEEeeccc
Confidence 3578999999 99999999999999 98 999999764
No 437
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=77.48 E-value=2.3 Score=43.41 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=28.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
.-.|+|+|+|+.|+.++..++.. |. +|+++++.+
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~~------Ga~~Vi~~~~~~ 228 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKTA------GASRIIGIDIDS 228 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHH------TCSCEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHc------CCCeEEEEcCCH
Confidence 34699999999999887777777 98 799998765
No 438
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=77.45 E-value=2.2 Score=42.87 Aligned_cols=33 Identities=27% Similarity=0.454 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCC--cEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~--~V~vlEk~~ 146 (592)
..|.|||+|..|.++|..|+.. |+ +|+++|...
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~------g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMK------DLADEVALVDVME 56 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHH------CCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEECCH
Confidence 5699999999999999999998 87 899999754
No 439
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=77.40 E-value=2.1 Score=45.54 Aligned_cols=33 Identities=21% Similarity=0.259 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|.|||+|.-|...|..|++. |++|+++|+..
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a------G~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH------GHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCeEEEEECCH
Confidence 3599999999999999999998 99999999875
No 440
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=77.32 E-value=2.2 Score=43.02 Aligned_cols=34 Identities=21% Similarity=0.209 Sum_probs=28.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
.-.|+|+|+|+.|+.++..++.. |.+|+++++.+
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~------Ga~Vi~~~~~~ 210 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAM------GAEVSVFARNE 210 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHT------TCEEEEECSSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHC------CCeEEEEeCCH
Confidence 34699999999999887777766 99999999765
No 441
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=77.14 E-value=2.3 Score=42.26 Aligned_cols=34 Identities=12% Similarity=0.427 Sum_probs=29.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCC--cEEEEcCCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGAE 147 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~--~V~vlEk~~~ 147 (592)
..|.|||||..|...|..|+.. |+ +|+++|....
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~------g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK------GIADRLVLLDLSEG 50 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECCC--
T ss_pred CEEEEECCCHHHHHHHHHHHhc------CCCCEEEEEcCCcc
Confidence 5699999999999999999988 88 9999998653
No 442
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=77.13 E-value=2.1 Score=45.36 Aligned_cols=35 Identities=17% Similarity=0.309 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAE 147 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~~ 147 (592)
..|.|||+|..|+..|..|++. +|+ +|+++|+...
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~-----~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADA-----PCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHS-----TTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHh-----CCCCeEEEEECChh
Confidence 5799999999999999999985 379 9999998875
No 443
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=77.03 E-value=2.5 Score=42.35 Aligned_cols=32 Identities=25% Similarity=0.360 Sum_probs=28.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCC--cEEEEcCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKG 145 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~--~V~vlEk~ 145 (592)
..|.|||+|..|.++|..|++. ++ +++++|..
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~------~~~~el~l~D~~ 43 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQ------GIAQEIGIVDIF 43 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEeCC
Confidence 5699999999999999999998 77 89999974
No 444
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=76.91 E-value=2.4 Score=40.71 Aligned_cols=32 Identities=22% Similarity=0.390 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCC-CcEEEEcCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVD-LSVCVVEKGA 146 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g-~~V~vlEk~~ 146 (592)
.|.|||+|-.|.+.|..|++. | .+|+++++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~------g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQ------GGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------CSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHC------CCCeEEEECCCH
Confidence 489999999999999999998 9 8999999764
No 445
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=76.89 E-value=2.5 Score=42.18 Aligned_cols=33 Identities=15% Similarity=0.201 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCC----CcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVD----LSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g----~~V~vlEk~~ 146 (592)
..|.|||+|-.|.+.|..|++. | .+|+++++..
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~------G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAA------GVLAAHKIMASSPDM 59 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHT------TSSCGGGEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCCcceEEEECCCc
Confidence 4699999999999999999998 8 7999999875
No 446
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=76.77 E-value=1.7 Score=43.84 Aligned_cols=34 Identities=24% Similarity=0.141 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCC-------CcEEEEcCCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVD-------LSVCVVEKGAE 147 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g-------~~V~vlEk~~~ 147 (592)
..|.|||+|-.|.+.|..|++. | .+|+++++...
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~------g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGN------AAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH------HHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhc------CCcccCCCCeEEEEEcChh
Confidence 4699999999999999999998 8 89999998764
No 447
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=76.71 E-value=2.2 Score=46.25 Aligned_cols=51 Identities=18% Similarity=0.279 Sum_probs=39.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCC---cccccCccChHHHH
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGA---HIISGNVFEPRALN 164 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~---~~~~g~~i~~~~l~ 164 (592)
-.|+|||+|..|...|..|.+. |.+|+++|+.+..-. ....|...+...|.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~------g~~v~vid~d~~~~~~~~~~i~gD~t~~~~L~ 402 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK------PVPFILIDRQESPVCNDHVVVYGDATVGQTLR 402 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCCSSCCSSCEEESCSSSSTHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHC------CCCEEEEECChHHHhhcCCEEEeCCCCHHHHH
Confidence 5799999999999999999998 999999998875321 23445555555543
No 448
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=76.62 E-value=2.3 Score=43.07 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=28.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
-.|+|+|+|+.|+.++..++.. |.+|+++++.+
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~------Ga~Vi~~~~~~ 213 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAM------GAETYVISRSS 213 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCEEEEEESSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCH
Confidence 4699999999999988777777 99999999765
No 449
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=76.47 E-value=2.7 Score=41.79 Aligned_cols=32 Identities=22% Similarity=0.449 Sum_probs=28.4
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
.|.|||||..|.+.|..|+.. ++ .++++|...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~------~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR------GYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH------TCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhC------CCCEEEEEcCCh
Confidence 389999999999999999988 77 699999764
No 450
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=76.36 E-value=2.6 Score=41.52 Aligned_cols=34 Identities=24% Similarity=0.391 Sum_probs=29.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
...|+|||+|-.|..+|..|++. |+ +++|+|...
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~a------GVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRC------GIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHH------TCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHc------CCCEEEEECCCc
Confidence 46799999999999999999999 87 688998654
No 451
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=76.20 E-value=4.5 Score=36.62 Aligned_cols=33 Identities=27% Similarity=0.434 Sum_probs=29.8
Q ss_pred ccEEEECC-CHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGA-GPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGa-G~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|+|+|| |..|..++..|.+. |.+|+++.|..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~------g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA------GYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC------CCeEEEEEeCh
Confidence 35999999 99999999999998 99999999865
No 452
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=76.05 E-value=2.8 Score=42.30 Aligned_cols=33 Identities=27% Similarity=0.226 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|.|||.|..|-+.|..|++. |.+|+++++..
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~------G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA------NHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 4599999999999999999998 99999999765
No 453
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=75.88 E-value=2.1 Score=42.17 Aligned_cols=33 Identities=18% Similarity=0.247 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|.|||+|..|...|..|++. |++|+++++..
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~------G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA------GYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhC------CCeEEEEcCCH
Confidence 3599999999999999999998 99999999864
No 454
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=75.64 E-value=2.7 Score=40.96 Aligned_cols=34 Identities=21% Similarity=0.288 Sum_probs=29.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
...|+|+|+|-+|.++|..|++. |. +|+|+.|..
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~------G~~~v~i~~R~~ 154 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQA------GPSELVIANRDM 154 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT------CCSEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHHc------CCCEEEEEeCCH
Confidence 35699999999999999999998 96 899998754
No 455
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=75.64 E-value=2.5 Score=41.03 Aligned_cols=32 Identities=28% Similarity=0.351 Sum_probs=28.8
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCC--cEEEEcCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~--~V~vlEk~~ 146 (592)
.|.|||+|..|.+.|..|++. |. +|+++++..
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~------g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRS------GFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHT------TCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhc------CCCcEEEEEeCCH
Confidence 489999999999999999998 88 899999764
No 456
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=75.46 E-value=2.1 Score=41.95 Aligned_cols=34 Identities=24% Similarity=0.248 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
...|+|+|+|-+|-++|..|++. |. +|+|+.|..
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~------G~~~v~v~nRt~ 156 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDN------FAKDIYVVTRNP 156 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHT------TCSEEEEEESCH
T ss_pred CCEEEEECCcHHHHHHHHHHHHc------CCCEEEEEeCCH
Confidence 45799999999999999999998 98 899998764
No 457
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=75.44 E-value=2.8 Score=40.49 Aligned_cols=32 Identities=31% Similarity=0.505 Sum_probs=29.3
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
.|+|||+|-.|.+.|..|.+. |.+|+++++..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~------g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA------GLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT------TCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHC------CCEEEEEECCH
Confidence 799999999999999999998 88999999764
No 458
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=75.42 E-value=2.9 Score=41.88 Aligned_cols=33 Identities=24% Similarity=0.341 Sum_probs=28.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC--cEEEEcCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKG 145 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~--~V~vlEk~ 145 (592)
...|+|||+|..|.++|+.|+.. ++ .++++|..
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~------~~~~el~L~Di~ 43 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQ------GIAQEIGIVDIF 43 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHcC------CCCCEEEEEeCC
Confidence 46799999999999999999887 65 79999974
No 459
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=75.24 E-value=1.9 Score=42.39 Aligned_cols=32 Identities=25% Similarity=0.430 Sum_probs=28.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|+|+|+|-+|.++|..|++. | +|+|+.|..
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~------G-~V~v~~r~~ 160 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKD------N-NIIIANRTV 160 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSS------S-EEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHC------C-CEEEEECCH
Confidence 4699999999999999999998 9 999998753
No 460
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=75.18 E-value=2.5 Score=41.42 Aligned_cols=32 Identities=19% Similarity=0.203 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
.|.|||+|-.|...|..|++. |.+|+++++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~------g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKH------GYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHT------TCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 489999999999999999998 99999999865
No 461
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=75.17 E-value=2.8 Score=38.55 Aligned_cols=32 Identities=28% Similarity=0.346 Sum_probs=29.1
Q ss_pred cEEEECC-CHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 109 DVVIVGA-GPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 109 DVvIVGa-G~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
.|+|+|| |..|..++..|.+. |.+|+++.|..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNR------GHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhC------CCEEEEEEcCc
Confidence 4899996 99999999999998 99999999875
No 462
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=75.06 E-value=3.1 Score=40.27 Aligned_cols=34 Identities=29% Similarity=0.427 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
..|+|.|+|..|..++..|.+. |.+|+++.|...
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQ------GHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCcc
Confidence 3599999999999999999998 999999998753
No 463
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=75.06 E-value=2.7 Score=41.02 Aligned_cols=33 Identities=21% Similarity=0.349 Sum_probs=30.0
Q ss_pred ccEEEECC-CHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGA-GPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGa-G~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|.|||+ |-.|.+.|..|++. |.+|+++++..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~------g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS------AHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS------SSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC------CCEEEEEECCH
Confidence 46999999 99999999999998 99999999754
No 464
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=75.05 E-value=2.2 Score=42.64 Aligned_cols=34 Identities=15% Similarity=0.159 Sum_probs=30.0
Q ss_pred cccEEEECCC-HHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAG-PAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG-~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|+|||+| ..|-.+|..|.+. |.+|+|+++..
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~------gAtVtv~nR~~ 211 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLAND------GATVYSVDVNN 211 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTT------SCEEEEECSSE
T ss_pred CCEEEEECCCcchHHHHHHHHHHC------CCEEEEEeCch
Confidence 4679999999 6799999999998 99999998763
No 465
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=74.94 E-value=2.9 Score=42.12 Aligned_cols=34 Identities=24% Similarity=0.431 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
...|+|||+|-.|..+|..|++. |+ +++|+|...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~a------GVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAW------GVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHc------CCCEEEEecCCE
Confidence 46799999999999999999999 87 588898654
No 466
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=74.79 E-value=2.3 Score=44.40 Aligned_cols=34 Identities=26% Similarity=0.249 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|+|||.|..|..+|..|+.. |.+|+++|+.+
T Consensus 247 GKTVgVIG~G~IGr~vA~~lraf------Ga~Viv~d~dp 280 (464)
T 3n58_A 247 GKVAVVCGYGDVGKGSAQSLAGA------GARVKVTEVDP 280 (464)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHHC------CCEEEEEeCCc
Confidence 35699999999999999999998 99999999754
No 467
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=74.74 E-value=3 Score=40.92 Aligned_cols=35 Identities=23% Similarity=0.166 Sum_probs=31.3
Q ss_pred cccEEEECC-CHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 107 AYDVVIVGA-GPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 107 ~~DVvIVGa-G~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
...|+|.|| |..|..++..|.+. |.+|+++.|...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVAS------GEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT------TCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHC------CCEEEEEecCCc
Confidence 456999999 99999999999998 999999998764
No 468
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=74.55 E-value=2.9 Score=42.34 Aligned_cols=33 Identities=21% Similarity=0.216 Sum_probs=28.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
-.|+|+|+|+.|+.++..++.. |.+|+++++.+
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~~------Ga~Vi~~~~~~ 214 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKAM------GHHVTVISSSN 214 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCh
Confidence 4599999999999988777777 99999999764
No 469
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=74.52 E-value=2.7 Score=41.82 Aligned_cols=34 Identities=15% Similarity=0.260 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
...|+|+|+|-+|-++|..|++. |. +|+|+.|..
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~------G~~~v~v~nRt~ 182 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIE------GIKEIKLFNRKD 182 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCSEEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHc------CCCEEEEEECCC
Confidence 35699999999999999999998 98 799998873
No 470
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=74.44 E-value=2.8 Score=41.66 Aligned_cols=32 Identities=19% Similarity=0.267 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKG 145 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~ 145 (592)
..|.|||.|..|...|..|++. |. +|+++++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~------G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQA------GAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------SCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC------CCCeEEEEcCC
Confidence 4699999999999999999999 99 99999986
No 471
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=74.43 E-value=2.3 Score=44.39 Aligned_cols=34 Identities=24% Similarity=0.375 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
...-|||.|..|+.+|..|++. |++|+++|+.+.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~------G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKH------GVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHC------CCEEEEEECCHH
Confidence 4578999999999999999999 999999998764
No 472
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=74.18 E-value=2.9 Score=42.57 Aligned_cols=32 Identities=16% Similarity=0.231 Sum_probs=29.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEK 144 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk 144 (592)
...|+|+|+|-.|..+|..|.+. |.+|++.|+
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~~------GakVvv~D~ 204 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNTE------GAKLVVTDV 204 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECS
T ss_pred cCEEEEECchHHHHHHHHHHHHC------CCEEEEEcC
Confidence 45699999999999999999999 999999985
No 473
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=74.09 E-value=3.4 Score=42.25 Aligned_cols=35 Identities=20% Similarity=0.371 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
...|+|||+|..|..+|..+++. |++|++++..+.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~l------G~~viv~d~~~~ 46 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKM------GYKVVVLDPSED 46 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEECCCC
Confidence 35699999999999999999999 999999997654
No 474
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=73.97 E-value=3.1 Score=44.16 Aligned_cols=33 Identities=15% Similarity=0.439 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
.+|.|||+|..|...|..|++. |.+|+++++..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~------G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH------GFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHC------CCeEEEEeCCH
Confidence 3699999999999999999998 99999999865
No 475
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=73.94 E-value=2.8 Score=41.11 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=29.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
...|+|+|+|-+|-+.|..|++. |. +|+|+.|..
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~------G~~~v~v~~R~~ 160 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQ------QPASITVTNRTF 160 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT------CCSEEEEEESSH
T ss_pred CCEEEEECchHHHHHHHHHHHhc------CCCeEEEEECCH
Confidence 35699999999999999999998 96 899998754
No 476
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=73.83 E-value=5.4 Score=40.36 Aligned_cols=34 Identities=18% Similarity=0.081 Sum_probs=30.1
Q ss_pred ccEEEECC-CHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 108 YDVVIVGA-GPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 108 ~DVvIVGa-G~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
..|+|.|| |..|..++..|.+. |.+|+++.|...
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~------g~~V~~~~r~~~ 63 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGK------GYEVHGLIRRSS 63 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHC------CCEEEEEecCCc
Confidence 45999998 99999999999998 999999987653
No 477
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=73.65 E-value=3.2 Score=38.43 Aligned_cols=32 Identities=22% Similarity=0.376 Sum_probs=29.2
Q ss_pred cEEEECC-CHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 109 DVVIVGA-GPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 109 DVvIVGa-G~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
.|+|.|| |..|..++..|.+. |.+|+++.|..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRR------GHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHC------CCEEEEEEecc
Confidence 3999998 99999999999998 99999999864
No 478
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=73.57 E-value=2.9 Score=41.13 Aligned_cols=33 Identities=18% Similarity=0.174 Sum_probs=27.7
Q ss_pred ccEEEECC-CHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGA-GPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGa-G~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|+|.|| |..|..++..|.+. |.+|+++.+..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~ 36 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQN------NWHAVGCGFRR 36 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT------TCEEEEEC---
T ss_pred CeEEEECCCcHHHHHHHHHHHhC------CCeEEEEccCC
Confidence 35999998 99999999999998 99999999754
No 479
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=73.56 E-value=2.6 Score=43.04 Aligned_cols=33 Identities=18% Similarity=0.184 Sum_probs=27.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
-.|+|+|+|+.|+.++..++.. |.+|+++++.+
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~------Ga~Vi~~~~~~ 228 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAM------GAHVVAFTTSE 228 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSG
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 4599999999999887776666 99999998654
No 480
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=73.37 E-value=3 Score=40.84 Aligned_cols=33 Identities=21% Similarity=0.361 Sum_probs=29.6
Q ss_pred ccEEEEC-CCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVG-AGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVG-aG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|+|+| +|.+|.++|..|++. |.+|+++.|..
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~------G~~V~i~~R~~ 153 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGE------GAEVVLCGRKL 153 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHT------TCEEEEEESSH
T ss_pred CEEEEECCCcHHHHHHHHHHHHC------cCEEEEEECCH
Confidence 4699999 899999999999998 99999998753
No 481
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=73.35 E-value=3.1 Score=43.25 Aligned_cols=34 Identities=24% Similarity=0.334 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|+|||.|..|..+|..|... |.+|+++|+.+
T Consensus 211 GktVgIiG~G~IG~~vA~~Lka~------Ga~Viv~D~~p 244 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALRGF------GARVVVTEVDP 244 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCCh
Confidence 46799999999999999999998 99999999754
No 482
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=73.20 E-value=3.5 Score=43.73 Aligned_cols=34 Identities=15% Similarity=0.429 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
.+|.|||.|..|...|..|++. |++|+++++...
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~------G~~V~v~dr~~~ 38 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH------GFVVCAFNRTVS 38 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSTH
T ss_pred CEEEEEChhHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 4699999999999999999998 999999998763
No 483
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=73.18 E-value=2.2 Score=46.25 Aligned_cols=54 Identities=17% Similarity=0.254 Sum_probs=42.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCC--------CCcccccCccChHHHHH
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEV--------GAHIISGNVFEPRALNE 165 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~--------g~~~~~g~~i~~~~l~~ 165 (592)
.+-.|+|||.|..|...|..|.+. |.+|+++|+.... +.....|...++..|.+
T Consensus 126 ~~~hviI~G~g~~g~~la~~L~~~------~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~ 187 (565)
T 4gx0_A 126 TRGHILIFGIDPITRTLIRKLESR------NHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAG 187 (565)
T ss_dssp CCSCEEEESCCHHHHHHHHHTTTT------TCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHH
T ss_pred cCCeEEEECCChHHHHHHHHHHHC------CCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHh
Confidence 456799999999999999999998 9999999987531 44455666666666644
No 484
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=73.12 E-value=2.9 Score=40.73 Aligned_cols=33 Identities=12% Similarity=0.268 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
..|+|||+|-+|-++|..|++. |. +|+|+.|..
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~------G~~~i~v~nRt~ 153 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNS------GFEKLKIYARNV 153 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHT------TCCCEEEECSCH
T ss_pred CEEEEECCcHHHHHHHHHHHHC------CCCEEEEEeCCH
Confidence 4699999999999999999998 97 799998764
No 485
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=73.06 E-value=2.3 Score=47.34 Aligned_cols=99 Identities=19% Similarity=0.097 Sum_probs=70.7
Q ss_pred ccEEEEC--CCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCCCCcccccCccChHHHHHhhHhhhhcCCCeeeeccCCc
Q 007716 108 YDVVIVG--AGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (592)
Q Consensus 108 ~DVvIVG--aG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ll~~~~~~~~~~~~~~~~~~ 185 (592)
-+|+||| +|..|+.+|..|++. |.+|+++++.+.+... ...
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~------g~~Vtlv~~~~~l~~~------------------~~~------------- 566 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQK------GYEVSIVTPGAQVSSW------------------TNN------------- 566 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHT------TCEEEEEESSSSTTGG------------------GGG-------------
T ss_pred CEEEEEcCCCCccHHHHHHHHHhC------CCeeEEEecccccccc------------------ccc-------------
Confidence 4599999 999999999999999 9999999987754321 000
Q ss_pred EEEeecCCcccCCCCCCCCCcEEEcHHHHHHHHHHHHHHcCCEEecCceEEEEEEcCCCcEEEEEeccCcccCCCCcccc
Q 007716 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (592)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~~V~~~d~g~~~~G~~~~~ 265 (592)
..+...|.+.+++.||+|+++++|+++..+ + + .+.... +|
T Consensus 567 --------------------------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~--~-~-~v~~~~-----~~----- 606 (690)
T 3k30_A 567 --------------------------TFEVNRIQRRLIENGVARVTDHAVVAVGAG--G-V-TVRDTY-----AS----- 606 (690)
T ss_dssp --------------------------GTCHHHHHHHHHHTTCEEEESEEEEEEETT--E-E-EEEETT-----TC-----
T ss_pred --------------------------chhHHHHHHHHHHCCCEEEcCcEEEEEECC--e-E-EEEEcc-----CC-----
Confidence 011334566677789999999999998643 2 2 233211 11
Q ss_pred cccceEEEcCEEEEecCCCC
Q 007716 266 FQRGVELRGRITLLAEGCRG 285 (592)
Q Consensus 266 f~~g~~i~a~~vI~A~G~~s 285 (592)
++.++.+|.||+|+|..+
T Consensus 607 --~~~~i~aD~VV~A~G~~p 624 (690)
T 3k30_A 607 --IERELECDAVVMVTARLP 624 (690)
T ss_dssp --CEEEEECSEEEEESCEEE
T ss_pred --eEEEEECCEEEECCCCCC
Confidence 257899999999999554
No 486
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=73.05 E-value=3.1 Score=44.18 Aligned_cols=34 Identities=15% Similarity=0.318 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
+.+|.|||+|..|.+.|..|++. |.+|+++++..
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~------G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR------GYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT------TCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhC------CCeEEEEeCCH
Confidence 46799999999999999999998 99999999864
No 487
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=72.95 E-value=2.9 Score=42.52 Aligned_cols=33 Identities=27% Similarity=0.283 Sum_probs=28.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
-.|+|+|+|+.|+.++..++.. |.+|+++++.+
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~------Ga~Vi~~~~~~ 221 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAF------GSKVTVISTSP 221 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCG
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 4699999999999988887777 99999998654
No 488
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=72.93 E-value=3.7 Score=41.28 Aligned_cols=33 Identities=27% Similarity=0.505 Sum_probs=29.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC--cEEEEcCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKG 145 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~--~V~vlEk~ 145 (592)
...|.|||+|..|.+.|..|+.. |+ .++++|..
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~------~~~~el~L~Di~ 53 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMK------DLADELALVDVI 53 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCceEEEEeCC
Confidence 46799999999999999999987 77 89999975
No 489
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=72.87 E-value=3.2 Score=38.95 Aligned_cols=34 Identities=21% Similarity=0.244 Sum_probs=30.5
Q ss_pred cccEEEECC-CHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 107 AYDVVIVGA-GPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGa-G~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...|+|.|| |..|..+|..|.+. |.+|+++.|..
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~------G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNK------GHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHhC------CCeEEEEECCh
Confidence 346999998 99999999999998 99999999875
No 490
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=72.77 E-value=2.8 Score=44.21 Aligned_cols=51 Identities=29% Similarity=0.445 Sum_probs=37.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC---------CCCcccccCccChHHHH
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE---------VGAHIISGNVFEPRALN 164 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~---------~g~~~~~g~~i~~~~l~ 164 (592)
.-.|+|+|||-.|..+|..|.+ +.+|.|+|+... ......+|...++..|.
T Consensus 235 ~~~v~I~GgG~ig~~lA~~L~~-------~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ 294 (461)
T 4g65_A 235 YRRIMIVGGGNIGASLAKRLEQ-------TYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLT 294 (461)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-------TSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHH
T ss_pred ccEEEEEcchHHHHHHHHHhhh-------cCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHh
Confidence 3579999999999999998854 689999998753 12333556666655543
No 491
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=72.74 E-value=6.4 Score=39.16 Aligned_cols=55 Identities=16% Similarity=0.289 Sum_probs=39.1
Q ss_pred cccEEEECC-CHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCCC-CCcccccCccChHHHHHhh
Q 007716 107 AYDVVIVGA-GPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEV-GAHIISGNVFEPRALNELL 167 (592)
Q Consensus 107 ~~DVvIVGa-G~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~~-g~~~~~g~~i~~~~l~~ll 167 (592)
...|+|.|| |..|..++..|.+. |.+|+++.+.... +.....+...++..+.+++
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~------G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~ 75 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQ------GRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAI 75 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHT------TCCEEEEESSCCSSCCSEEESCTTCHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhC------CCEEEEEeCCCCCCCccEEecCcCCHHHHHHHH
Confidence 456999999 99999999999998 9999999987642 2222344445555555544
No 492
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=72.69 E-value=6 Score=37.00 Aligned_cols=38 Identities=16% Similarity=0.169 Sum_probs=24.6
Q ss_pred cccEEEECCCHHHHHHHHH--HHHhhhhcCCCCc-EEEEcCCCCCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIR--LKQLCREKNVDLS-VCVVEKGAEVGA 150 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~--La~~~~~~~~g~~-V~vlEk~~~~g~ 150 (592)
...|+|||+|-.|-+.|.. .... |++ |.++|..+..-+
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~------g~~iVg~~D~dp~k~g 125 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNN------NTKISMAFDINESKIG 125 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------------CCEEEEEESCTTTTT
T ss_pred CCEEEEEccCHHHHHHHHHHhcccC------CcEEEEEEeCCHHHHH
Confidence 4679999999999998884 2233 776 558887765433
No 493
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=72.65 E-value=3.2 Score=40.88 Aligned_cols=35 Identities=17% Similarity=0.118 Sum_probs=30.5
Q ss_pred ccccEEEECCC-HHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 106 MAYDVVIVGAG-PAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 106 ~~~DVvIVGaG-~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
...+|+|||+| +.|..+|..|.+. |..|+++.+..
T Consensus 164 ~gk~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~hs~t 199 (301)
T 1a4i_A 164 AGRHAVVVGRSKIVGAPMHDLLLWN------NATVTTCHSKT 199 (301)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHhC------CCeEEEEECCc
Confidence 35689999999 6899999999998 99999998553
No 494
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=72.65 E-value=3.7 Score=41.48 Aligned_cols=33 Identities=30% Similarity=0.430 Sum_probs=28.6
Q ss_pred ccEEEECC-CHHHHHHHHHHHHhhhhcCCCC--cEEEEcCCC
Q 007716 108 YDVVIVGA-GPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGa-G~aGl~aA~~La~~~~~~~~g~--~V~vlEk~~ 146 (592)
..|+|||+ |-.|.++|..++.. |+ +|+++|...
T Consensus 9 ~KV~ViGaaG~VG~~~a~~l~~~------g~~~evvLiDi~~ 44 (343)
T 3fi9_A 9 EKLTIVGAAGMIGSNMAQTAAMM------RLTPNLCLYDPFA 44 (343)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHT------TCCSCEEEECSCH
T ss_pred CEEEEECCCChHHHHHHHHHHhc------CCCCEEEEEeCCc
Confidence 56999998 99999999999987 74 799999753
No 495
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=72.53 E-value=2.4 Score=41.85 Aligned_cols=36 Identities=22% Similarity=0.295 Sum_probs=28.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 106 ~~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
|...|-+||-|..|...|..|.+. |++|+++++.+.
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~------G~~V~v~dr~~~ 39 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEA------GYELVVWNRTAS 39 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHT------TCEEEEC-----
T ss_pred CCCcEEEEecHHHHHHHHHHHHHC------CCeEEEEeCCHH
Confidence 445699999999999999999999 999999998764
No 496
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=72.49 E-value=3.2 Score=42.53 Aligned_cols=34 Identities=21% Similarity=0.403 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~~ 147 (592)
..|+|||+|..|..+|..+++. |++|++++..+.
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~------G~~vi~~d~~~~ 48 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEM------GYKIAVLDPTKN 48 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSTT
T ss_pred CEEEEECCCHHHHHHHHHHHHc------CCEEEEEeCCCC
Confidence 4699999999999999999999 999999997653
No 497
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=72.48 E-value=3 Score=42.44 Aligned_cols=33 Identities=21% Similarity=0.254 Sum_probs=27.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
-.|+|+|+|+.|+.++..++.. |. +|+++++.+
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~~~ 226 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAA------GASRIIGVGTHK 226 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCSEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHc------CCCeEEEECCCH
Confidence 4699999999999887777767 98 788998654
No 498
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=72.28 E-value=3.3 Score=41.87 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHhhhhcCCCC-cEEEEcCCC
Q 007716 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (592)
Q Consensus 107 ~~DVvIVGaG~aGl~aA~~La~~~~~~~~g~-~V~vlEk~~ 146 (592)
...|+|||+|..|..+|..|++. |+ +++|+|...
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~------Gvg~itlvD~d~ 70 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILA------GVKGLTMLDHEQ 70 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH------TCSEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCCEEEEEECCC
Confidence 57899999999999999999999 98 799999543
No 499
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=72.24 E-value=2.9 Score=46.81 Aligned_cols=33 Identities=27% Similarity=0.310 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 108 ~DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
..|.|||+|..|...|..|++. |++|+++|+..
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~a------G~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILS------NYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT------TCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhC------CCEEEEEECCH
Confidence 3599999999999999999998 99999999875
No 500
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=72.21 E-value=3.4 Score=43.80 Aligned_cols=32 Identities=28% Similarity=0.452 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHHhhhhcCCCCcEEEEcCCC
Q 007716 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (592)
Q Consensus 109 DVvIVGaG~aGl~aA~~La~~~~~~~~g~~V~vlEk~~ 146 (592)
+|.|||+|..|...|..|++. |.+|+++++..
T Consensus 3 kIgVIG~G~mG~~lA~~La~~------G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK------GFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT------TCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 599999999999999999998 99999999864
Done!