BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007717
(591 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84N64|ARC5_ARATH Dynamin-like protein ARC5 OS=Arabidopsis thaliana GN=ARC5 PE=1 SV=2
Length = 777
Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/590 (78%), Positives = 520/590 (88%), Gaps = 6/590 (1%)
Query: 1 MQHREFIILCLEDCSDWSNATTRRVVMQIDPELKRTIIVSTKLDTKIPQFARASDVEVFL 60
MQH+EFIILCLED SDWS ATTRR+VMQ+DPEL RTI+VSTKLDTKIPQF+ +SDVEVFL
Sbjct: 191 MQHKEFIILCLEDSSDWSIATTRRIVMQVDPELSRTIVVSTKLDTKIPQFSCSSDVEVFL 250
Query: 61 SPPACTLDGFILGGSPFFTSVPSGRVGTGHDSVYSSNEEFKQAIFIREMEDITSLEEKLG 120
SPPA LD +LG SPFFTSVPSGRVG G DSVY SN+EFKQA+ +REMEDI SLE+KLG
Sbjct: 251 SPPASALDSSLLGDSPFFTSVPSGRVGYGQDSVYKSNDEFKQAVSLREMEDIASLEKKLG 310
Query: 121 RSLSKQERSRIGVSKLRSFLEELLQKRYMDSVPMIIPLLEKEYCSTTRKLNEINKELSTL 180
R L+KQE+SRIG+SKLR FLEELL KRY +SVP+IIPLL KEY ST RKL+ ++KELS+L
Sbjct: 311 RLLTKQEKSRIGISKLRLFLEELLWKRYKESVPLIIPLLGKEYRSTVRKLDTVSKELSSL 370
Query: 181 DEVKLKEKGRVFHDLFLTKLSLLLKGTVVAPPDKFGETLQNERINGGAFVGTDGLQFPHK 240
DE KLKE+GR FHDLFLTKLSLLLKGTVVAPPDKFGETLQ+ER GGAFVGTDGLQF HK
Sbjct: 371 DEAKLKERGRTFHDLFLTKLSLLLKGTVVAPPDKFGETLQDERTQGGAFVGTDGLQFSHK 430
Query: 241 LIPNAGMRLYGGAQYHRAMAEFRFMVGGIKCPPITREEIVNACGVEDIHDGTNYSRTACV 300
LIPNAGMRLYGGAQYHRAMAEFRF+VG IKCPPITREEIVNACGVEDIHDGTNYSRTACV
Sbjct: 431 LIPNAGMRLYGGAQYHRAMAEFRFLVGAIKCPPITREEIVNACGVEDIHDGTNYSRTACV 490
Query: 301 IAVAKARDTFEPFLHQLGCRLLHILKRLLPISIYLLQKEGEYLSGHEVFLRRVASAFNNF 360
IAVAKAR+TFEPFLHQLG RLLHILKRLLPIS+YLLQKEGEYLSGHEVFL+RVASAFN+F
Sbjct: 491 IAVAKARETFEPFLHQLGARLLHILKRLLPISVYLLQKEGEYLSGHEVFLKRVASAFNSF 550
Query: 361 AESTERACREKCMEDLVSTTRYVTWSLHNKNRAGLRQFLDSFGSTEQSAVLSNSLSMPLC 420
ESTE++CR+KCMEDL STTRYVTWSLHNKNRAGLRQFLDSFG TE + N++ L
Sbjct: 551 VESTEKSCRDKCMEDLASTTRYVTWSLHNKNRAGLRQFLDSFGGTEHNTTSGNAIGFSLP 610
Query: 421 QESSFVSVANEKHDTKPRTDVKLSQVASGVDSSSSVQTTETRLADLLDNTLWNRRLAPSS 480
Q++ DTK R+DVKLS +AS +DS SS+QTTE RLADLLD+TLWNR+LAPSS
Sbjct: 611 QDA-----LGGTTDTKSRSDVKLSHLASNIDSGSSIQTTEMRLADLLDSTLWNRKLAPSS 665
Query: 481 ERIVYALVQQIFHGIREYFLASAELKFNCFLLMPVVDKLPALLREDLESAFEGDLDNVFD 540
ERIVYALVQQIF GIREYFLASAELKFNCFLLMP+VDKLPALLRE+LE+AFE DLD++FD
Sbjct: 666 ERIVYALVQQIFQGIREYFLASAELKFNCFLLMPIVDKLPALLREELENAFEDDLDSIFD 725
Query: 541 ITNLRHSLSQQKSDTEIEMKRIKKLKEKFKLIHEQFISHHVMSSLSLAPS 590
ITNLR SL Q+K TEIE++RIK++KEKF++++E+ SH +L APS
Sbjct: 726 ITNLRQSLDQKKRSTEIELRRIKRIKEKFRVMNEKLNSHEFAQNLK-APS 774
>sp|Q55AX0|DLPC_DICDI Dynamin-like protein C OS=Dictyostelium discoideum GN=dlpC PE=2
SV=2
Length = 904
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 155/577 (26%), Positives = 258/577 (44%), Gaps = 79/577 (13%)
Query: 7 IILCLEDCS-DWSNATTRRVVMQIDPELKRTIIVSTKLDTKIPQFARASDVEVFLSPPAC 65
II+CLE + +W+N +R +V +IDP+ RTI+V+TK D ++ + +L
Sbjct: 308 IIVCLEQSNVEWANTISRPLVKKIDPDFSRTILVNTKFDNRVKELRNRESAHKYLEG--- 364
Query: 66 TLDGFILGGSPFFTSVPSGRVGTGHDSVYSSNEEFKQAIFIREMEDITSLEEKLGRSLSK 125
+G I PFF S+P R H + E F R++ +I E + G
Sbjct: 365 --EGIIAQKKPFFISLPLKRNLETHRFKDAMKETFLDDY--RKLLEIGFDENRFG----- 415
Query: 126 QERSRIGVSKLRSFLEELLQKRYMDSVPMIIPLLEKEYCSTTRKLNEINKELSTLDEVKL 185
+IG+ K+R ++E LL ++Y ++ + LE T + + KELS + V L
Sbjct: 416 ---GQIGIYKVRQYVENLLHEKYQQNLLPSMLQLESICKKTEADIVRVKKELSDNNIVTL 472
Query: 186 KEKGRVFHDLFLTKLSLLLKGTVVAPPDKFGETLQNERINGGAFVGTDGLQFPHKLIPNA 245
KEK F F ++ LL+G+VV PD+FG+TL E+ N G F I N+
Sbjct: 473 KEKVMRFVSNFNGQIERLLEGSVVGDPDEFGQTLLQEKENCSV-QPWPGYNFDFD-IQNS 530
Query: 246 GMRLYGGAQYHRAMAEFRFMVGGIKCPPITREEIVNACGVEDIHDGTNYSRTACVIAVAK 305
LYGGAQY R + EF F++ + P + E+ +A GV H+ Y A I K
Sbjct: 531 NYSLYGGAQYERLLNEFEFVIHSKEFPETSINEVASAIGVSKSHNSPIYELAATNIFQTK 590
Query: 306 ARDTFEPFLHQLGCRLLHILKRLLPISIYLLQKE----GEYLSGHEVFLRRVASAFNNFA 361
++ P + + R +I+KRL IS+ +L K+ +S +E FL+ + S + F
Sbjct: 591 SKKVLLPLIDIVLQRSSYIMKRLFDISVSILGKDENESSHTVSLYEHFLKELQSQYEKFI 650
Query: 362 ESTERACREKCMEDLVSTTRYVTWSLHNKNRAGLRQFLDSFGSTEQSAVLSNSLSMPLCQ 421
++ E C+ + +D T+ V W+L + G TE +
Sbjct: 651 QTIESECKSRLKDDFEMFTKIVDWNLLS-------------GLTE-------------IK 684
Query: 422 ESSFVSVANEKHDTKPRTDVKLSQVASGVDSSSSVQTTETRLADLLDNTLWNRRLAPSSE 481
+++ V+ E +TK R V S +D +R ++ D+T
Sbjct: 685 PYNYLKVSPE--ETKQR-------VISIMDCKKLEDEPLSRSRNIDDDTY---------- 725
Query: 482 RIVYALVQQIFHGIREYFLASAELKFNCFLLMPVVDKLPALLREDLESAFEGDLDNVF-- 539
+ V + ++F GIR +F K N F L P+ KL + + + + + +F
Sbjct: 726 QKVCMIAGRLFSGIRFFFSKLIRNKLNAFFLDPMFQKLGSFVTDYFSKLNDQKYEEMFQL 785
Query: 540 ---DITNLRHSLSQQKSDTEIEMKRIKKLKEKFKLIH 573
++ N H L E ++ KK ++KFK ++
Sbjct: 786 GLKELENKLHKL-------EFQLIDCKKNRDKFKDVY 815
>sp|Q55F94|DLPA_DICDI Dynamin-like protein A OS=Dictyostelium discoideum GN=dlpA PE=2
SV=1
Length = 880
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 145/620 (23%), Positives = 247/620 (39%), Gaps = 144/620 (23%)
Query: 3 HREFIILCLEDCS-DWSNATTRRVVMQIDPELKRTIIVSTKLDTKIPQFARASDVEVFLS 61
HR +I+ +E CS DW + + + + +IDPEL R+ V TK + F+ D+ +LS
Sbjct: 343 HR--LIIAVESCSQDWKSMSMGQYLKKIDPELSRSTFVFTKFHHTVRGFSSTRDINKYLS 400
Query: 62 PPACTLDGFILGGSPFFTSVPSGRVGTGHDSVYSSNEEFKQAIFIREMEDITSLEEKLGR 121
+ GF F ++P+ +V YS F++ I+ D+ +LE+
Sbjct: 401 GTVPDIKGF-------FVTLPNHQVRAS----YSEANRFQEKIYQAHKRDMHALEQ---L 446
Query: 122 SLSKQERSRIGVSKLRSFLEELLQKRYMDSVPMIIPLLEKEYCSTTRKLNEINKELSTLD 181
K+ IGV+ LR ++ ++ K Y D++P I+ L + + LNE+ K+ S+LD
Sbjct: 447 QYDKRYERTIGVAPLRRYILNIVWKSYQDTIPRILKHLRSKRQTAEATLNELQKQSSSLD 506
Query: 182 EVKLKEKGRVFHDLFLTKLSLLLKGTVVAPPDKFGETLQNERINGG-------AFVGTDG 234
KL+ + FL LL GT P G+TL E+ G A+
Sbjct: 507 STKLRSIASNYTVTFLQITEKLLSGTSEGNPSANGQTLDEEKSQQGDCGEWVDAYKEAIY 566
Query: 235 LQFPHKLIPNAGMRLYGGAQYHRAMAEFRFMVGGIKCPPITREEIVNACGVEDIHDGTNY 294
+ IP +LYGG Q R MAEF+ + K + ++I A G+ +++ NY
Sbjct: 567 IDPEEWNIPYWSSKLYGGQQLERLMAEFKAVCDNSKISEVKMDDIATASGINKLNNIPNY 626
Query: 295 SRTACVIAVAKARDTFEPFLHQLGCRLLHILKRLLPISIYLL------------------ 336
+ A + +RDTF P + QL R ++I+KRL I+ ++
Sbjct: 627 AWAASDLTSLISRDTFVPLIEQLCERAMYIMKRLTDIADKVIDSRRKSRCIGSSPFGGNG 686
Query: 337 -------------------QKEGEYLSGHEVFLRRVASAFNNFAESTERACREKCMEDLV 377
+ + L + F V + + +F + C+EKCM++
Sbjct: 687 LNNINSGGNNGININDRLSNTDMDSLDQYPFFTHHVKNLYYDFVHRAAKGCKEKCMDEFY 746
Query: 378 STTRYVTWSLHNKNRAGLRQFLDSFGSTEQSAVLSNSLSMPLCQESSFVSVANEKHDTKP 437
S +R + W L TE +SS S+ N+ H+TK
Sbjct: 747 S-SRTIYWEL-----------------TEHP-------------DSSLPSIRNDHHETK- 774
Query: 438 RTDVKLSQVASGVDSSSSVQTTETRLADLLDNTLWNRRLAPSSERIVYALVQQIFHGIRE 497
+ Q+A+ ++F IR+
Sbjct: 775 ---TAVCQLAT-----------------------------------------KLFDSIRQ 790
Query: 498 YFLASAELKFNCFLLMPVVDKLPALLREDLESAFEGDLDNVFDITNLRHSLSQQKSDTEI 557
+ LK F L+P+ L ++ + L+ +F++ R L Q
Sbjct: 791 RITKNVLLKLYNFFLVPMQTDLWNEIQAQITCLSNEQLEQLFEVQATREQLKQ------- 843
Query: 558 EMKRIKKLKEKFKLIHEQFI 577
E K+ +++ EK+ I EQF+
Sbjct: 844 EEKKQQQILEKYSQIDEQFL 863
>sp|F4HPR5|DRP5A_ARATH Dynamin-related protein 5A OS=Arabidopsis thaliana GN=DRP5A PE=2
SV=1
Length = 817
Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 193/402 (48%), Gaps = 30/402 (7%)
Query: 3 HREFIILCLEDCS-DWSNATTRRVVMQIDPELKRTIIVSTKLDTKIPQFARASDVEVFLS 61
HR I+L L+ S +W ++ V +ID +RTI+V +K D ++ +F+ +V+ +LS
Sbjct: 207 HR--ILLFLQQSSVEWCSSLWLDAVREIDSSFRRTIVVVSKFDNRLKEFSDRGEVDRYLS 264
Query: 62 PPACTLDGFILGGS-PFFTSVPSGRVGTGHDSVYSSNEEFKQAIFIREMEDITSLEEKLG 120
G++ + P+F ++P R SN+EF++ I + E I L E +
Sbjct: 265 -----ASGYLGENTRPYFVALPKDRSTI-------SNDEFRRQISQVDTEVIRHLREGVK 312
Query: 121 RSLSKQE-RSRIGVSKLRSFLEELLQKRYMDSVPMIIPLLEKEYCSTTRKLNEINKEL-S 178
+++ RS IG LR FLE LQKRY ++ P + LLE+ T + ++ ++ +
Sbjct: 313 GGFDEEKFRSCIGFGSLRDFLESELQKRYKEAAPATLALLEERCSEVTDDMLRMDMKIQA 372
Query: 179 TLDEVKLKEKGRVFHDLFLTKLSLLLKGTVVAPPDKFGETLQNERINGGAFVGT-DGLQF 237
T D L++ ++ + L+ G P+++G+T + ER G + +G+ G+
Sbjct: 373 TSDVAHLRKAAMLYTASISNHVGALIDGAANPAPEQWGKTTEEER--GESGIGSWPGVSV 430
Query: 238 PHKLIPNAGMRLYGGAQYHRAMAEFRFMVGGIKCPPITREEIVNA-CGVEDIHDGTNYSR 296
K PNA ++LYGGA + R + EFR I+CPP++RE++ N G +
Sbjct: 431 DIK-PPNAVLKLYGGAAFERVIHEFRCAAYSIECPPVSREKVANILLAHAGRGGGRGVTE 489
Query: 297 TACVIAVAKARDTFEPFLHQLGCRLLHILKRLLPISIYL-------LQKEGEYLSGHEVF 349
+ IA AR P L RL +L L I++ +K+ E + G+ F
Sbjct: 490 ASAEIARTAARSWLAPLLDTACDRLAFVLGSLFEIALERNLNQNSEYEKKTENMDGYVGF 549
Query: 350 LRRVASAFNNFAESTERACREKCMEDLVSTTRYVTWSLHNKN 391
V + ++ F ++ + C++ L S T + + + N
Sbjct: 550 HAAVRNCYSRFVKNLAKQCKQLVRHHLDSVTSPYSMACYENN 591
>sp|Q54MH8|DLPB_DICDI Dynamin-like protein B OS=Dictyostelium discoideum GN=dlpB PE=2
SV=1
Length = 808
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 146/321 (45%), Gaps = 38/321 (11%)
Query: 28 QIDPELKRTIIVSTK---LDTKIPQFARASDVEVFLSPPACTLDGFILGGSPFFTSVPSG 84
++D +L R+I V K L T F D FL P+ +G FFT++PS
Sbjct: 226 KLDYKLDRSIFVFNKFHSLLTGDQPFTNGRDANRFLGSPS-------IGAPTFFTTLPS- 277
Query: 85 RVGTGHDSVYSSNEEFKQAIFIREMEDITSLEEKLGRSLSKQERSRIGVSKLRSFLEELL 144
T S +S ++ Q + D+ LE+ K+ +G+S R ++ E
Sbjct: 278 ---TAQRSQCNSKDQLSQLCDQLQQTDLNILEQ---LQFDKKYERNVGLSAFRHWISEFT 331
Query: 145 QKRYMDSVPMIIPLLEKEYCSTTRKLNEINKELSTLDEVKLKEKGRVFHDL-FLTKLSLL 203
++Y+DSVP ++ L ++ +L +I ++L + V L++ + + F+ + L
Sbjct: 332 WRKYLDSVPEVLKRLNSFRTTSEDQLYQIRQQLERTNAVTLRQIANSYVSIEFIQCIEKL 391
Query: 204 LKGTVVAPPDKFGETLQNERING--GAFVGTDG----LQFPHKLIPNAGMRLYGGAQYHR 257
+ T+ P G+TL+ E+ G + +G L KL+ +LYGG Q+ R
Sbjct: 392 VTRTLEGNPSLNGQTLEEEKSQDETGDWYDHNGKPILLLNDEKLVTFYDNKLYGGQQFER 451
Query: 258 AMAEFRFMVGGIKCPPITREEIVNACGVEDIHDGTNYSRTACVIAVA-------KARDTF 310
+ EF+ + I+ ++ E+ AC + G+N A VIA A K ++
Sbjct: 452 LLTEFKCITEVIQLEELSISEV--ACAI-----GSNRPSNASVIAWAASDLAQKKIKEAL 504
Query: 311 EPFLHQLGCRLLHILKRLLPI 331
P + QL R +IL+RL+ I
Sbjct: 505 LPLVDQLFKRATYILRRLVDI 525
>sp|Q5U3A7|OPA1_DANRE Dynamin-like 120 kDa protein, mitochondrial OS=Danio rerio GN=opa1
PE=2 SV=1
Length = 966
Score = 39.3 bits (90), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Query: 1 MQHREFIILCLEDCS-DWSNATTRRVVMQIDPELKRTIIVSTKLDTKIPQFARASDVEVF 59
MQ+ IILC++D S D + +V Q+DP+ KRTI V TK+D A S ++
Sbjct: 432 MQNPNAIILCIQDGSVDAERSIVTDLVSQMDPQGKRTIFVLTKVDLAEKNLASPSRIQQI 491
Query: 60 LSPPACTLDGFILGGSPFFTSVPS-GRVGTGHDSVYSSNEEFKQ 102
+ F + +F V G DS+ E+F Q
Sbjct: 492 VEGKL-----FPMKALGYFAVVTGKGSPNESIDSIKDYEEDFFQ 530
>sp|Q5F499|OPA1_CHICK Dynamin-like 120 kDa protein, mitochondrial OS=Gallus gallus
GN=OPA1 PE=2 SV=1
Length = 977
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Query: 1 MQHREFIILCLEDCS-DWSNATTRRVVMQIDPELKRTIIVSTKLDTKIPQFARASDVEVF 59
MQ+ IILC++D S D + +V Q+DP+ KRTI V TK+D A S ++
Sbjct: 443 MQNPNAIILCIQDGSVDAERSIVTDLVSQMDPQGKRTIFVLTKVDLAEKNVASPSRIQQI 502
Query: 60 LSPPACTLDGFILGGSPFFTSVPS-GRVGTGHDSVYSSNEEFKQ 102
+ F + +F V G +S+ EEF Q
Sbjct: 503 IEGKL-----FPMKALGYFAVVTGKGNSSESIESIKEYEEEFFQ 541
>sp|Q2TA68|OPA1_RAT Dynamin-like 120 kDa protein, mitochondrial OS=Rattus norvegicus
GN=Opa1 PE=1 SV=1
Length = 960
Score = 36.6 bits (83), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 1 MQHREFIILCLEDCS-DWSNATTRRVVMQIDPELKRTIIVSTKLDTKIPQFARASDVE 57
MQ+ IILC++D S D + +V Q+DP +RTI V TK+D A S ++
Sbjct: 426 MQNPNAIILCIQDGSVDAERSIVTDLVSQMDPHGRRTIFVLTKVDLAEKNVASPSRIQ 483
>sp|Q5RAM3|OPA1_PONAB Dynamin-like 120 kDa protein, mitochondrial OS=Pongo abelii GN=OPA1
PE=2 SV=1
Length = 960
Score = 36.6 bits (83), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 1 MQHREFIILCLEDCS-DWSNATTRRVVMQIDPELKRTIIVSTKLDTKIPQFARASDVE 57
MQ+ IILC++D S D + +V Q+DP +RTI V TK+D A S ++
Sbjct: 426 MQNPNAIILCIQDGSVDAERSIVTDLVSQMDPHGRRTIFVLTKVDLAEKNVASPSRIQ 483
>sp|Q9SE83|DRP2A_ARATH Dynamin-2A OS=Arabidopsis thaliana GN=DRP2A PE=1 SV=2
Length = 914
Score = 36.2 bits (82), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 30/163 (18%)
Query: 2 QHREFIILCLEDCSDWSNATTRR---VVMQIDPELKRTIIVSTKLDTKIPQFARASDVEV 58
QH + I+L + S S ++ R + + DPE RTI + K+D + V+
Sbjct: 162 QHNDAILLVIVPASQASEISSSRALKIAKEYDPESTRTIGIIGKIDQAAENSKALAAVQA 221
Query: 59 FLS---PPACTLDGF--ILGGSPFFTSVPSGRVGTGHDSVYSSNEEFKQAIFIREMEDIT 113
LS PP T + ++G S S+ S + G+G +S+ ++ + E E +
Sbjct: 222 LLSNQGPPKTTDIPWVAVIGQS---VSIASAQSGSGENSLETA--------WRAESESLK 270
Query: 114 SL-----EEKLGR-----SLSKQERSRIGVSKLRSFLEELLQK 146
S+ + KLGR +L+ Q RSR+ + +L S L L K
Sbjct: 271 SILTGAPQSKLGRIALVDTLASQIRSRMKL-RLPSVLSGLQGK 312
>sp|P58281|OPA1_MOUSE Dynamin-like 120 kDa protein, mitochondrial OS=Mus musculus GN=Opa1
PE=1 SV=1
Length = 960
Score = 36.2 bits (82), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 1 MQHREFIILCLEDCS-DWSNATTRRVVMQIDPELKRTIIVSTKLDTKIPQFARASDVE 57
MQ+ IILC++D S D + +V Q+DP +RTI V TK+D A S ++
Sbjct: 426 MQNPNAIILCIQDGSVDAERSIVTDLVSQMDPHGRRTIFVLTKVDLAEKNVASPSRIQ 483
>sp|O60313|OPA1_HUMAN Dynamin-like 120 kDa protein, mitochondrial OS=Homo sapiens GN=OPA1
PE=1 SV=3
Length = 960
Score = 36.2 bits (82), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 1 MQHREFIILCLEDCS-DWSNATTRRVVMQIDPELKRTIIVSTKLDTKIPQFARASDVE 57
MQ+ IILC++D S D + +V Q+DP +RTI V TK+D A S ++
Sbjct: 426 MQNPNAIILCIQDGSVDAERSIVTDLVSQMDPHGRRTIFVLTKVDLAEKNVASPSRIQ 483
>sp|Q1ICL4|PYRD_PSEE4 Dihydroorotate dehydrogenase (quinone) OS=Pseudomonas entomophila
(strain L48) GN=pyrD PE=3 SV=1
Length = 340
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 17/115 (14%)
Query: 359 NFAESTERACREK--CMEDLVSTTRYVTWSLHNKNRAGLR---------QFLDSFGSTEQ 407
NF ERA + C+E + + Y+T ++ + N GLR Q LD+ +
Sbjct: 142 NFDTPVERAQDDYLICLEKVYNDASYITVNVSSPNTPGLRSLQFGDSLKQLLDALAERRE 201
Query: 408 SAVLSNSLSMPLCQESSFVSVANEKHDTKPRTDVKLSQVASGVDSSSSVQTTETR 462
+SN +PL + +A + D + V + + SG+D+ + TT R
Sbjct: 202 QLAVSNGKRVPLA-----IKIAPDMSDEE-TALVAAALMESGMDAVIATNTTLGR 250
>sp|Q9LQ55|DRP2B_ARATH Dynamin-2B OS=Arabidopsis thaliana GN=DRP2B PE=1 SV=2
Length = 920
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 22/149 (14%)
Query: 2 QHREFIILCLEDCSDWSNATTRR---VVMQIDPELKRTIIVSTKLDTKIPQFARASDVEV 58
QH + I+L + S S ++ R + + DPE RT+ + +K+D + V+
Sbjct: 162 QHNDAILLVVVPASQASEISSSRALKIAKEYDPESTRTVGIISKIDQAAENPKSLAAVQA 221
Query: 59 FLS---PPACTLDGFI--LGGSPFFTSVPSGRVGTGHDSVYSSNEEFKQAIFIREMEDIT 113
LS PP T ++ +G S S SG ++ + + E ++I
Sbjct: 222 LLSNQGPPKTTDIPWVALIGQSVSIASAQSGGSENSLETAWRAESESLKSIL------TG 275
Query: 114 SLEEKLGR-----SLSKQERSRIGVSKLR 137
+ + KLGR +L+ Q RSR+ KLR
Sbjct: 276 APQSKLGRIALVDTLASQIRSRM---KLR 301
>sp|B0KG90|PYRD_PSEPG Dihydroorotate dehydrogenase (quinone) OS=Pseudomonas putida
(strain GB-1) GN=pyrD PE=3 SV=1
Length = 341
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 27/155 (17%)
Query: 329 LPISIYLLQKEGEYLSGHEVFLRRVASA-FN---------NFAESTERACREK--CMEDL 376
LP + ++ + G G + L RV +A +N NF ERA + C++ +
Sbjct: 102 LPEATAIINRMGFNNLGVDHLLERVRAARYNGVLGINIGKNFDTPVERAVDDYLICLDKV 161
Query: 377 VSTTRYVTWSLHNKNRAGLR---------QFLDSFGSTEQSAVLSNSLSMPLCQESSFVS 427
+ Y+T ++ + N GLR Q LD+ + +++ +PL +
Sbjct: 162 YTAASYITVNVSSPNTPGLRSLQFGDSLKQLLDALAERREQLAVTHGKRVPLA-----IK 216
Query: 428 VANEKHDTKPRTDVKLSQVASGVDSSSSVQTTETR 462
+A + D + V + +ASG+D+ + TT R
Sbjct: 217 IAPDMSDEE-TALVAAALMASGMDAVIATNTTLGR 250
>sp|O93248|OPA1_ONCMA Dynamin-like 120 kDa protein, mitochondrial OS=Oncorhynchus masou
GN=opa1 PE=2 SV=1
Length = 971
Score = 33.1 bits (74), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Query: 1 MQHREFIILCLEDCSDWSNATTRRVVMQIDPELKRTIIVSTKLDTKIPQFARASDVEVFL 60
MQ+ IILC++D S + A R P +RTI V TK+D A + ++ +
Sbjct: 438 MQNPNAIILCIQDGSVDAEADRHRPGQSNGPAGERTIFVLTKVDLAEKNLASPNRIQQIV 497
Query: 61 SPPACTLDGFILGGSPFFTSVPS-GRVGTGHDSVYSSNEEFKQ 102
F + +F V G G DS+ E+F Q
Sbjct: 498 EGKL-----FPMKALGYFAVVTGKGSAGESIDSIKDYEEDFFQ 535
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 207,963,607
Number of Sequences: 539616
Number of extensions: 8606890
Number of successful extensions: 23349
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 23258
Number of HSP's gapped (non-prelim): 142
length of query: 591
length of database: 191,569,459
effective HSP length: 123
effective length of query: 468
effective length of database: 125,196,691
effective search space: 58592051388
effective search space used: 58592051388
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)