Query 007721
Match_columns 591
No_of_seqs 399 out of 2198
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 08:50:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007721.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007721hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w3b_A UDP-N-acetylglucosamine 100.0 2.9E-31 1E-35 279.4 31.8 313 235-556 49-385 (388)
2 1w3b_A UDP-N-acetylglucosamine 100.0 1.6E-29 5.5E-34 266.1 38.3 330 235-577 15-368 (388)
3 3hve_A Gigaxonin; ubiquitin, c 100.0 1.8E-31 6.2E-36 268.3 15.7 197 47-249 24-226 (256)
4 3i3n_A Kelch-like protein 11; 100.0 1.1E-30 3.7E-35 266.0 14.2 196 50-251 28-236 (279)
5 3ieg_A DNAJ homolog subfamily 100.0 1.9E-26 6.4E-31 236.9 35.5 312 221-549 6-345 (359)
6 2y4t_A DNAJ homolog subfamily 100.0 7.7E-27 2.6E-31 249.4 33.6 316 220-552 28-371 (450)
7 3hym_B Cell division cycle pro 100.0 9.7E-27 3.3E-31 236.8 32.5 276 258-557 24-317 (330)
8 2h6f_A Protein farnesyltransfe 100.0 1.7E-27 5.8E-32 253.0 21.4 248 290-557 99-366 (382)
9 3htm_A Speckle-type POZ protei 100.0 9.6E-28 3.3E-32 226.1 15.2 146 47-196 27-172 (172)
10 3ieg_A DNAJ homolog subfamily 99.9 3.9E-25 1.3E-29 227.0 35.4 294 256-577 3-335 (359)
11 2y4t_A DNAJ homolog subfamily 99.9 4.8E-25 1.6E-29 235.5 33.4 295 255-577 25-358 (450)
12 2xpi_A Anaphase-promoting comp 99.9 3.1E-25 1.1E-29 246.0 32.6 294 235-556 288-596 (597)
13 4g1t_A Interferon-induced prot 99.9 3.9E-25 1.3E-29 238.2 29.7 318 221-545 54-406 (472)
14 3fp2_A TPR repeat-containing p 99.9 1.2E-24 4E-29 237.6 32.0 258 290-572 245-529 (537)
15 1fch_A Peroxisomal targeting s 99.9 2.2E-25 7.6E-30 231.3 24.1 271 265-558 34-344 (368)
16 2gw1_A Mitochondrial precursor 99.9 5.9E-25 2E-29 238.0 28.3 327 221-577 9-444 (514)
17 2gw1_A Mitochondrial precursor 99.9 2.3E-24 7.9E-29 233.3 31.2 274 256-554 186-493 (514)
18 2xpi_A Anaphase-promoting comp 99.9 7.8E-24 2.7E-28 234.7 36.0 289 260-576 276-578 (597)
19 3fp2_A TPR repeat-containing p 99.9 2.2E-24 7.6E-29 235.4 31.1 296 221-545 28-412 (537)
20 4eqf_A PEX5-related protein; a 99.9 2.4E-25 8.2E-30 231.9 22.3 234 258-543 67-313 (365)
21 1fch_A Peroxisomal targeting s 99.9 7.6E-25 2.6E-29 227.3 24.7 279 237-540 43-359 (368)
22 2h6f_A Protein farnesyltransfe 99.9 8.7E-25 3E-29 232.1 24.6 245 255-524 96-366 (382)
23 3hqi_A Speckle-type POZ protei 99.9 8.3E-26 2.8E-30 233.5 14.8 144 48-195 168-311 (312)
24 2pl2_A Hypothetical conserved 99.9 6.2E-25 2.1E-29 214.0 19.8 179 335-538 22-212 (217)
25 3cv0_A Peroxisome targeting si 99.9 2.1E-24 7E-29 219.3 23.5 263 257-543 22-318 (327)
26 4g1t_A Interferon-induced prot 99.9 1.2E-23 4.1E-28 226.6 29.1 267 255-545 50-368 (472)
27 3hym_B Cell division cycle pro 99.9 2.5E-23 8.7E-28 211.5 29.0 275 234-529 37-323 (330)
28 2pl2_A Hypothetical conserved 99.9 3.6E-24 1.2E-28 208.6 21.1 185 349-558 2-199 (217)
29 3uq3_A Heat shock protein STI1 99.9 1.3E-23 4.4E-28 206.0 24.2 227 255-542 4-238 (258)
30 3vtx_A MAMA; tetratricopeptide 99.9 8.7E-24 3E-28 198.6 19.8 174 350-547 3-177 (184)
31 4eoz_A Speckle-type POZ protei 99.9 1.6E-25 5.6E-30 204.7 5.3 128 47-178 18-145 (145)
32 3u4t_A TPR repeat-containing p 99.9 6.1E-23 2.1E-27 203.9 22.9 236 258-545 5-255 (272)
33 3cv0_A Peroxisome targeting si 99.9 9.8E-23 3.4E-27 206.9 24.9 246 289-558 22-300 (327)
34 4eqf_A PEX5-related protein; a 99.9 5.4E-23 1.8E-27 214.1 23.0 223 335-576 82-309 (365)
35 3mkr_A Coatomer subunit epsilo 99.9 7.8E-23 2.7E-27 208.9 22.2 249 266-545 9-269 (291)
36 4gyw_A UDP-N-acetylglucosamine 99.9 4.9E-23 1.7E-27 235.3 17.1 175 347-545 4-179 (723)
37 2vkp_A BTB/POZ domain-containi 99.9 7.4E-23 2.5E-27 177.8 12.4 102 50-155 4-109 (109)
38 4a1s_A PINS, partner of inscut 99.9 3.7E-22 1.3E-26 210.7 20.4 292 254-563 46-395 (411)
39 1ouv_A Conserved hypothetical 99.9 1.3E-20 4.5E-25 188.5 27.2 232 256-550 6-261 (273)
40 3sf4_A G-protein-signaling mod 99.9 8.7E-22 3E-26 206.1 19.3 286 256-559 9-362 (406)
41 4abn_A Tetratricopeptide repea 99.9 1.1E-21 3.9E-26 213.9 20.5 211 303-537 83-318 (474)
42 2if5_A Zinc finger and BTB dom 99.9 1.7E-22 5.9E-27 178.7 10.8 101 48-151 19-119 (120)
43 1xnf_A Lipoprotein NLPI; TPR, 99.9 1.9E-21 6.6E-26 192.8 19.3 245 262-534 11-269 (275)
44 3uq3_A Heat shock protein STI1 99.9 6E-21 2E-25 186.8 22.3 205 335-576 22-235 (258)
45 2q7f_A YRRB protein; TPR, prot 99.9 2.2E-21 7.6E-26 188.7 19.0 205 321-552 29-235 (243)
46 3ro2_A PINS homolog, G-protein 99.9 2.6E-21 8.9E-26 195.7 18.6 270 257-544 6-336 (338)
47 4abn_A Tetratricopeptide repea 99.9 3.3E-21 1.1E-25 210.3 20.1 197 335-556 85-304 (474)
48 3vtx_A MAMA; tetratricopeptide 99.9 4.7E-21 1.6E-25 179.8 17.0 170 322-520 12-182 (184)
49 4i17_A Hypothetical protein; T 99.9 1.2E-20 4E-25 183.6 20.2 177 349-549 4-219 (228)
50 1r29_A B-cell lymphoma 6 prote 99.9 1.3E-21 4.5E-26 174.9 11.3 103 48-153 23-125 (127)
51 3u4t_A TPR repeat-containing p 99.9 2E-20 6.9E-25 185.6 20.8 214 335-576 20-249 (272)
52 2ond_A Cleavage stimulation fa 99.9 6E-20 2.1E-24 188.1 24.9 231 273-543 33-273 (308)
53 2z8h_A Transcription regulator 99.9 3.8E-22 1.3E-26 181.1 7.5 107 48-160 30-137 (138)
54 3mkr_A Coatomer subunit epsilo 99.9 6.2E-20 2.1E-24 187.3 24.8 265 235-535 15-289 (291)
55 2ppi_A Gigaxonin; BTB domain, 99.9 8E-22 2.7E-26 180.3 9.3 102 48-152 41-144 (144)
56 2q7f_A YRRB protein; TPR, prot 99.9 2.2E-20 7.5E-25 181.7 19.6 217 256-526 23-242 (243)
57 3b84_A Zinc finger and BTB dom 99.9 7.3E-22 2.5E-26 174.6 7.9 98 50-154 20-117 (119)
58 2ho1_A Type 4 fimbrial biogene 99.8 1.1E-19 3.8E-24 178.3 23.5 188 335-546 54-244 (252)
59 1buo_A POZ domain, protein (pr 99.8 3.3E-21 1.1E-25 170.9 10.8 100 48-155 22-121 (121)
60 1xnf_A Lipoprotein NLPI; TPR, 99.8 7.3E-20 2.5E-24 181.4 21.6 221 298-544 15-248 (275)
61 3sf4_A G-protein-signaling mod 99.8 3.1E-20 1.1E-24 194.3 19.4 303 221-545 12-382 (406)
62 2vpk_A Myoneurin; transcriptio 99.8 3E-21 1E-25 169.7 9.4 98 50-152 18-115 (116)
63 3dss_A Geranylgeranyl transfer 99.8 6.5E-20 2.2E-24 189.7 20.1 223 335-585 47-310 (331)
64 2yy9_A Zinc finger and BTB dom 99.8 1.7E-21 5.7E-26 176.2 7.2 102 48-156 19-120 (135)
65 4gyw_A UDP-N-acetylglucosamine 99.8 3.2E-20 1.1E-24 212.0 17.4 155 335-513 26-181 (723)
66 2pzi_A Probable serine/threoni 99.8 2.7E-20 9.1E-25 212.2 16.6 189 317-530 389-587 (681)
67 2vq2_A PILW, putative fimbrial 99.8 6.6E-19 2.3E-23 168.5 23.0 188 335-546 25-217 (225)
68 2pzi_A Probable serine/threoni 99.8 4.4E-20 1.5E-24 210.4 16.8 183 346-556 388-580 (681)
69 1qqe_A Vesicular transport pro 99.8 9.9E-20 3.4E-24 185.3 17.6 227 271-551 32-280 (292)
70 3dra_A Protein farnesyltransfe 99.8 6.9E-19 2.4E-23 180.7 23.9 234 300-551 44-300 (306)
71 2ond_A Cleavage stimulation fa 99.8 5.5E-19 1.9E-23 181.0 22.5 220 335-580 33-274 (308)
72 2xm6_A Protein corresponding t 99.8 1.7E-17 5.7E-22 181.0 35.6 318 235-575 59-430 (490)
73 2ihc_A Transcription regulator 99.8 1.3E-21 4.5E-26 174.2 2.0 100 48-152 23-123 (124)
74 2xm6_A Protein corresponding t 99.8 2.2E-17 7.6E-22 179.9 35.7 266 258-556 149-448 (490)
75 3urz_A Uncharacterized protein 99.8 1.6E-19 5.5E-24 174.4 16.7 172 351-547 3-193 (208)
76 2q81_A MIZ-1 protein; BTB/POZ 99.8 7E-21 2.4E-25 168.3 6.4 95 50-152 23-117 (119)
77 4a1s_A PINS, partner of inscut 99.8 1.3E-19 4.4E-24 191.1 17.3 265 290-576 50-371 (411)
78 3ohu_A Transcription regulator 99.8 1.5E-21 5.2E-26 174.0 2.0 99 48-151 26-125 (125)
79 2ho1_A Type 4 fimbrial biogene 99.8 2.6E-18 8.9E-23 168.5 23.5 208 256-517 37-249 (252)
80 2vq2_A PILW, putative fimbrial 99.8 1.1E-18 3.9E-23 166.9 20.4 206 347-580 3-215 (225)
81 3m5b_A Zinc finger and BTB dom 99.8 1.4E-20 4.9E-25 166.2 6.5 91 51-153 27-117 (119)
82 3dra_A Protein farnesyltransfe 99.8 2.6E-18 8.9E-23 176.4 24.0 200 335-556 50-270 (306)
83 4i17_A Hypothetical protein; T 99.8 6E-19 2.1E-23 171.4 18.0 170 335-522 24-225 (228)
84 3ga1_A Nucleus accumbens-assoc 99.8 1.1E-20 3.6E-25 169.5 5.1 99 50-155 29-128 (129)
85 3qky_A Outer membrane assembly 99.8 2E-18 7E-23 171.6 20.4 188 344-545 7-229 (261)
86 3ro2_A PINS homolog, G-protein 99.8 9.8E-19 3.4E-23 176.7 18.0 265 291-577 8-332 (338)
87 4gco_A Protein STI-1; structur 99.8 3.4E-19 1.2E-23 158.5 12.6 121 343-521 4-125 (126)
88 2r5s_A Uncharacterized protein 99.8 4.4E-19 1.5E-23 166.2 13.6 168 348-539 2-172 (176)
89 1dce_A Protein (RAB geranylger 99.8 6.3E-20 2.2E-24 204.4 8.2 186 335-544 46-271 (567)
90 4ga2_A E3 SUMO-protein ligase 99.8 2.5E-19 8.5E-24 164.2 10.7 95 321-418 3-98 (150)
91 4ga2_A E3 SUMO-protein ligase 99.8 1.5E-19 5E-24 165.7 9.1 144 357-558 2-148 (150)
92 1ouv_A Conserved hypothetical 99.8 6.1E-17 2.1E-21 161.7 27.9 208 335-576 23-250 (273)
93 3nf1_A KLC 1, kinesin light ch 99.8 6.4E-19 2.2E-23 177.3 12.4 246 251-543 22-310 (311)
94 3qou_A Protein YBBN; thioredox 99.8 4.6E-18 1.6E-22 172.8 18.6 170 346-539 111-283 (287)
95 2ooe_A Cleavage stimulation fa 99.8 1.6E-16 5.3E-21 175.0 31.0 211 336-569 256-487 (530)
96 3ulq_A Response regulator aspa 99.8 4E-18 1.4E-22 179.3 17.1 245 257-543 104-371 (383)
97 3as5_A MAMA; tetratricopeptide 99.8 7.7E-18 2.6E-22 155.6 17.0 170 352-545 8-178 (186)
98 1qqe_A Vesicular transport pro 99.8 6.6E-18 2.3E-22 171.8 18.1 179 335-545 34-233 (292)
99 3e4b_A ALGK; tetratricopeptide 99.8 3.5E-17 1.2E-21 177.3 24.7 305 235-576 19-350 (452)
100 1hz4_A MALT regulatory protein 99.8 4.1E-17 1.4E-21 170.4 23.9 269 256-545 14-327 (373)
101 3fkc_A Transcriptional regulat 99.8 1.1E-18 3.6E-23 153.5 9.6 90 49-145 26-115 (116)
102 3dss_A Geranylgeranyl transfer 99.8 1.3E-16 4.5E-21 164.9 25.1 237 300-549 41-313 (331)
103 3e4b_A ALGK; tetratricopeptide 99.7 1.8E-16 6.2E-21 171.7 24.4 278 236-556 55-366 (452)
104 3urz_A Uncharacterized protein 99.7 1.1E-17 3.8E-22 161.4 13.2 190 292-519 8-198 (208)
105 4gco_A Protein STI-1; structur 99.7 1.6E-17 5.4E-22 147.7 12.7 120 376-553 3-124 (126)
106 2yhc_A BAMD, UPF0169 lipoprote 99.7 1.5E-16 5E-21 155.2 20.7 190 351-544 3-217 (225)
107 2ooe_A Cleavage stimulation fa 99.7 1.2E-15 4E-20 167.9 29.5 316 233-580 26-458 (530)
108 3qky_A Outer membrane assembly 99.7 4.3E-17 1.5E-21 162.0 16.1 189 335-531 32-252 (261)
109 2vsy_A XCC0866; transferase, g 99.7 5E-17 1.7E-21 180.6 17.0 159 335-551 6-169 (568)
110 4f3v_A ESX-1 secretion system 99.7 1.2E-17 4.1E-22 168.5 10.4 198 335-561 23-254 (282)
111 3gyz_A Chaperone protein IPGC; 99.7 1.1E-17 3.8E-22 154.0 9.2 68 478-545 71-138 (151)
112 3q7a_A Farnesyltransferase alp 99.7 6.5E-16 2.2E-20 160.5 23.5 177 335-527 71-258 (349)
113 1p5q_A FKBP52, FK506-binding p 99.7 2.3E-18 7.7E-23 179.4 4.3 202 263-540 72-294 (336)
114 3q7a_A Farnesyltransferase alp 99.7 3E-17 1E-21 170.6 12.7 191 344-558 46-256 (349)
115 3q15_A PSP28, response regulat 99.7 1.6E-16 5.6E-21 166.9 18.1 240 256-543 101-368 (378)
116 3edt_B KLC 2, kinesin light ch 99.7 1.1E-16 3.7E-21 158.1 14.8 183 335-541 18-282 (283)
117 2ifu_A Gamma-SNAP; membrane fu 99.7 4.2E-17 1.4E-21 167.0 12.1 207 268-545 3-228 (307)
118 3gyz_A Chaperone protein IPGC; 99.7 6.4E-17 2.2E-21 148.9 10.9 114 340-511 24-138 (151)
119 3nf1_A KLC 1, kinesin light ch 99.7 4.8E-16 1.6E-20 156.1 17.1 253 220-509 29-310 (311)
120 3ulq_A Response regulator aspa 99.7 2.6E-15 9.1E-20 157.6 21.9 205 335-558 120-353 (383)
121 3as5_A MAMA; tetratricopeptide 99.7 7.3E-16 2.5E-20 142.1 14.9 155 335-513 25-180 (186)
122 1hz4_A MALT regulatory protein 99.7 1.5E-14 5E-19 150.9 25.5 249 291-558 17-307 (373)
123 1dce_A Protein (RAB geranylger 99.7 6.7E-16 2.3E-20 171.9 16.0 174 361-558 37-240 (567)
124 1p5q_A FKBP52, FK506-binding p 99.7 4.8E-18 1.6E-22 176.9 -1.3 178 335-557 82-277 (336)
125 2hr2_A Hypothetical protein; a 99.7 2.3E-16 7.8E-21 145.3 9.9 116 352-518 11-143 (159)
126 2hr2_A Hypothetical protein; a 99.7 1.3E-16 4.3E-21 147.1 7.9 114 386-545 12-136 (159)
127 1hh8_A P67PHOX, NCF-2, neutrop 99.6 2.6E-15 8.9E-20 143.5 16.7 143 353-555 7-166 (213)
128 3edt_B KLC 2, kinesin light ch 99.6 1.1E-15 3.7E-20 150.9 13.6 237 235-507 17-282 (283)
129 2vgx_A Chaperone SYCD; alterna 99.6 1.5E-15 5.1E-20 138.7 13.3 120 340-517 9-129 (148)
130 2yhc_A BAMD, UPF0169 lipoprote 99.6 4E-15 1.4E-19 145.0 16.9 172 335-514 21-221 (225)
131 2c2l_A CHIP, carboxy terminus 99.6 1.9E-15 6.6E-20 153.0 14.7 218 335-582 21-251 (281)
132 2vgx_A Chaperone SYCD; alterna 99.6 1.7E-15 5.8E-20 138.3 11.0 115 373-545 8-123 (148)
133 2xcb_A PCRH, regulatory protei 99.6 1.6E-15 5.5E-20 136.8 10.0 126 339-522 5-131 (142)
134 3qou_A Protein YBBN; thioredox 99.6 1.1E-14 3.6E-19 147.9 16.3 147 335-505 134-283 (287)
135 2r5s_A Uncharacterized protein 99.6 6.9E-15 2.4E-19 137.5 13.7 155 258-413 8-172 (176)
136 2vsy_A XCC0866; transferase, g 99.6 2.2E-14 7.6E-19 159.2 19.0 161 270-518 3-169 (568)
137 2fo7_A Synthetic consensus TPR 99.6 4.5E-14 1.5E-18 122.5 16.5 133 353-543 2-135 (136)
138 1kt0_A FKBP51, 51 kDa FK506-bi 99.6 5.1E-17 1.7E-21 176.3 -3.3 178 344-533 216-407 (457)
139 3rjv_A Putative SEL1 repeat pr 99.6 3.9E-14 1.3E-18 137.0 17.5 188 335-550 3-207 (212)
140 1kt0_A FKBP51, 51 kDa FK506-bi 99.6 1.7E-15 5.7E-20 164.4 8.3 141 335-499 251-407 (457)
141 2xcb_A PCRH, regulatory protei 99.6 5.4E-15 1.8E-19 133.3 10.0 115 373-545 5-120 (142)
142 3q15_A PSP28, response regulat 99.6 2.3E-14 7.7E-19 150.5 16.3 226 291-558 104-350 (378)
143 3upv_A Heat shock protein STI1 99.6 2.8E-14 9.7E-19 125.1 13.9 116 349-522 1-123 (126)
144 1a17_A Serine/threonine protei 99.6 4.6E-14 1.6E-18 128.4 15.2 133 352-542 13-148 (166)
145 2ast_A S-phase kinase-associat 99.6 1.5E-14 5E-19 134.1 11.5 107 57-167 3-140 (159)
146 2c2l_A CHIP, carboxy terminus 99.6 2.2E-14 7.7E-19 145.1 13.7 168 349-545 1-169 (281)
147 3sz7_A HSC70 cochaperone (SGT) 99.5 3E-14 1E-18 131.2 13.0 118 348-523 7-125 (164)
148 4gcn_A Protein STI-1; structur 99.5 5.7E-14 1.9E-18 124.6 12.4 109 350-509 6-115 (127)
149 1hh8_A P67PHOX, NCF-2, neutrop 99.5 2.6E-13 8.9E-18 129.5 17.9 133 255-418 5-154 (213)
150 4f3v_A ESX-1 secretion system 99.5 4.5E-14 1.5E-18 142.4 12.6 160 335-517 64-247 (282)
151 3sz7_A HSC70 cochaperone (SGT) 99.5 7.8E-14 2.7E-18 128.4 13.3 114 385-556 11-125 (164)
152 2ifu_A Gamma-SNAP; membrane fu 99.5 1.5E-13 5E-18 140.6 16.5 206 259-544 39-267 (307)
153 1wao_1 Serine/threonine protei 99.5 4E-15 1.4E-19 162.3 4.0 138 350-545 4-155 (477)
154 2lni_A Stress-induced-phosphop 99.5 2.1E-13 7.3E-18 119.0 13.9 121 348-526 12-133 (133)
155 2qfc_A PLCR protein; TPR, HTH, 99.5 3.5E-13 1.2E-17 136.4 17.5 180 348-545 71-271 (293)
156 3upv_A Heat shock protein STI1 99.5 2.9E-13 1E-17 118.6 14.1 101 385-543 4-104 (126)
157 2e2e_A Formate-dependent nitri 99.5 6E-14 2E-18 130.5 10.2 124 363-544 21-148 (177)
158 2vyi_A SGTA protein; chaperone 99.5 1.8E-13 6.3E-18 118.4 12.3 126 345-528 5-131 (131)
159 1hxi_A PEX5, peroxisome target 99.5 1.4E-13 4.8E-18 121.0 11.1 101 387-545 19-119 (121)
160 3rkv_A Putative peptidylprolyl 99.5 1.8E-13 6.1E-18 125.8 12.1 116 351-524 10-145 (162)
161 1xi4_A Clathrin heavy chain; a 99.5 1.3E-12 4.3E-17 153.5 21.8 289 235-557 1001-1327(1630)
162 3rkv_A Putative peptidylprolyl 99.5 4E-13 1.4E-17 123.4 13.6 121 385-545 11-131 (162)
163 2fbn_A 70 kDa peptidylprolyl i 99.5 3.9E-14 1.3E-18 134.7 6.5 171 352-531 4-176 (198)
164 1zu2_A Mitochondrial import re 99.5 1.1E-13 3.6E-18 127.3 8.5 84 335-418 19-124 (158)
165 4gcn_A Protein STI-1; structur 99.5 1.7E-13 5.7E-18 121.5 9.4 95 321-418 14-116 (127)
166 3u3w_A Transcriptional activat 99.5 2.8E-13 9.6E-18 137.2 12.3 159 335-544 92-270 (293)
167 3q49_B STIP1 homology and U bo 99.4 6.7E-13 2.3E-17 117.3 13.2 121 346-524 3-129 (137)
168 2if4_A ATFKBP42; FKBP-like, al 99.4 3.8E-14 1.3E-18 147.5 5.4 142 346-545 173-333 (338)
169 2e2e_A Formate-dependent nitri 99.4 5.4E-13 1.8E-17 124.0 12.3 123 335-515 27-153 (177)
170 1zu2_A Mitochondrial import re 99.4 9.3E-14 3.2E-18 127.6 6.3 94 462-556 21-135 (158)
171 1na0_A Designed protein CTPR3; 99.4 3.9E-12 1.3E-16 109.0 15.7 121 347-525 3-125 (125)
172 1xi4_A Clathrin heavy chain; a 99.4 1.4E-11 4.9E-16 144.8 25.2 253 257-531 1106-1375(1630)
173 3mv2_B Coatomer subunit epsilo 99.4 4.6E-12 1.6E-16 129.2 17.5 247 267-545 24-287 (310)
174 3rjv_A Putative SEL1 repeat pr 99.4 4.4E-12 1.5E-16 122.5 16.5 180 369-576 3-196 (212)
175 2fo7_A Synthetic consensus TPR 99.4 8.1E-12 2.8E-16 108.1 16.5 130 258-417 3-135 (136)
176 1hxi_A PEX5, peroxisome target 99.4 1.1E-12 3.8E-17 115.2 10.5 85 335-419 34-119 (121)
177 2dba_A Smooth muscle cell asso 99.4 7.4E-12 2.5E-16 111.3 15.1 119 345-521 21-143 (148)
178 3q49_B STIP1 homology and U bo 99.4 3.5E-12 1.2E-16 112.6 12.4 105 381-543 4-109 (137)
179 1wao_1 Serine/threonine protei 99.4 4.8E-13 1.6E-17 145.8 7.7 138 320-484 11-162 (477)
180 3gw4_A Uncharacterized protein 99.4 3.9E-12 1.3E-16 119.7 12.7 168 335-554 9-190 (203)
181 1ihg_A Cyclophilin 40; ppiase 99.4 4E-12 1.4E-16 134.0 13.7 124 352-533 223-363 (370)
182 1elw_A TPR1-domain of HOP; HOP 99.3 1.6E-11 5.6E-16 104.1 14.6 111 352-520 4-115 (118)
183 1a17_A Serine/threonine protei 99.3 1.5E-11 5E-16 111.7 15.0 133 255-417 12-149 (166)
184 2kck_A TPR repeat; tetratricop 99.3 5.2E-12 1.8E-16 106.4 11.0 71 347-417 1-72 (112)
185 2lni_A Stress-induced-phosphop 99.3 8.9E-12 3E-16 108.5 12.9 113 385-555 16-129 (133)
186 3k9i_A BH0479 protein; putativ 99.3 1.6E-12 5.5E-17 112.8 7.9 100 462-561 9-113 (117)
187 2xev_A YBGF; tetratricopeptide 99.3 1.7E-11 5.8E-16 106.9 14.2 119 353-526 3-125 (129)
188 2fbn_A 70 kDa peptidylprolyl i 99.3 1.1E-12 3.7E-17 124.7 6.6 129 345-497 31-176 (198)
189 3ro3_A PINS homolog, G-protein 99.3 5.2E-12 1.8E-16 113.0 10.6 140 352-543 9-161 (164)
190 3k9i_A BH0479 protein; putativ 99.3 1.2E-12 4.1E-17 113.7 5.7 109 364-530 2-114 (117)
191 2vyi_A SGTA protein; chaperone 99.3 1.6E-11 5.6E-16 105.9 12.6 114 385-556 12-126 (131)
192 1b89_A Protein (clathrin heavy 99.3 1.2E-12 4.2E-17 139.2 6.3 233 257-542 33-274 (449)
193 2xev_A YBGF; tetratricopeptide 99.3 2E-11 6.9E-16 106.4 12.9 104 387-545 4-110 (129)
194 1b89_A Protein (clathrin heavy 99.3 9.4E-13 3.2E-17 140.1 5.0 269 220-540 34-311 (449)
195 1elw_A TPR1-domain of HOP; HOP 99.3 1.9E-11 6.6E-16 103.6 11.6 107 447-553 7-115 (118)
196 4ajy_C Transcription elongatio 99.3 9.2E-12 3.2E-16 105.3 9.3 81 57-140 4-97 (97)
197 1na0_A Designed protein CTPR3; 99.3 6E-11 2.1E-15 101.5 14.1 113 385-555 9-122 (125)
198 1elr_A TPR2A-domain of HOP; HO 99.3 2.4E-11 8.3E-16 105.1 11.5 125 349-525 1-126 (131)
199 2dba_A Smooth muscle cell asso 99.3 3.2E-11 1.1E-15 107.2 12.5 116 382-552 24-141 (148)
200 2kck_A TPR repeat; tetratricop 99.3 2.7E-11 9.2E-16 101.9 10.6 98 447-544 9-110 (112)
201 3ly7_A Transcriptional activat 99.3 1.6E-10 5.4E-15 120.0 18.3 156 389-559 200-358 (372)
202 2if4_A ATFKBP42; FKBP-like, al 99.2 1.4E-11 4.8E-16 128.0 9.4 154 255-419 178-333 (338)
203 1ihg_A Cyclophilin 40; ppiase 99.2 2E-11 6.9E-16 128.6 10.2 127 386-554 224-351 (370)
204 2qfc_A PLCR protein; TPR, HTH, 99.2 2.2E-10 7.5E-15 115.7 17.3 156 386-559 76-251 (293)
205 2kat_A Uncharacterized protein 99.2 5.4E-11 1.8E-15 102.4 9.3 84 462-545 4-87 (115)
206 3u3w_A Transcriptional activat 99.2 1.8E-10 6.1E-15 116.4 14.3 156 295-508 82-268 (293)
207 3gw4_A Uncharacterized protein 99.2 1E-10 3.5E-15 109.9 11.5 169 298-525 2-194 (203)
208 1elr_A TPR2A-domain of HOP; HO 99.2 8E-11 2.7E-15 101.7 9.9 109 445-553 5-121 (131)
209 1fs1_B SKP1, cyclin A/CDK2-ass 99.2 6.7E-11 2.3E-15 107.1 9.3 99 57-164 4-129 (141)
210 2kat_A Uncharacterized protein 99.2 1.3E-10 4.3E-15 100.0 10.5 84 335-418 2-86 (115)
211 4b4t_Q 26S proteasome regulato 99.1 8E-10 2.7E-14 116.9 16.4 195 325-540 14-245 (434)
212 4b4t_Q 26S proteasome regulato 99.1 3E-10 1E-14 120.2 12.7 214 261-505 9-244 (434)
213 3ma5_A Tetratricopeptide repea 99.1 1.1E-10 3.8E-15 98.5 7.5 74 472-545 2-75 (100)
214 2l6j_A TPR repeat-containing p 99.1 5.1E-11 1.8E-15 100.8 4.7 54 480-533 41-100 (111)
215 3ma5_A Tetratricopeptide repea 99.1 3.2E-10 1.1E-14 95.6 8.4 72 347-418 2-74 (100)
216 2p1m_A SKP1-like protein 1A; F 99.1 3.3E-11 1.1E-15 111.4 2.3 109 57-172 6-144 (160)
217 3ro3_A PINS homolog, G-protein 99.1 1.2E-09 4.2E-14 97.4 12.5 139 255-417 8-161 (164)
218 2l6j_A TPR repeat-containing p 99.0 7.9E-10 2.7E-14 93.3 9.4 83 476-558 3-92 (111)
219 1na3_A Designed protein CTPR2; 99.0 7.5E-10 2.6E-14 90.0 8.5 83 474-556 6-89 (91)
220 2kc7_A BFR218_protein; tetratr 98.9 1.9E-09 6.6E-14 89.6 7.3 57 479-543 37-93 (99)
221 1na3_A Designed protein CTPR2; 98.9 1E-08 3.5E-13 83.1 11.0 48 478-525 44-91 (91)
222 2eqx_A Kelch repeat and BTB do 98.8 1.5E-09 5.1E-14 93.1 4.4 92 152-245 5-97 (105)
223 3u64_A Protein TP_0956; tetrat 98.8 7.6E-08 2.6E-12 96.2 16.2 82 462-543 182-272 (301)
224 2kc7_A BFR218_protein; tetratr 98.8 5.3E-09 1.8E-13 86.9 6.6 85 323-418 8-94 (99)
225 3mv2_B Coatomer subunit epsilo 98.8 5.7E-08 2E-12 99.0 14.6 199 275-534 85-306 (310)
226 4e6h_A MRNA 3'-END-processing 98.8 1.9E-07 6.6E-12 105.5 20.3 237 338-580 329-574 (679)
227 3ly7_A Transcriptional activat 98.8 1.2E-07 4.2E-12 98.4 16.8 143 257-419 197-344 (372)
228 4e6h_A MRNA 3'-END-processing 98.7 9.2E-07 3.2E-11 100.0 21.6 227 307-556 328-588 (679)
229 3bee_A Putative YFRE protein; 98.7 5.9E-08 2E-12 81.1 8.6 71 473-543 2-75 (93)
230 1hv2_A Elongin C, ELC1; protei 98.6 1.5E-07 5E-12 79.6 9.3 79 57-140 6-99 (99)
231 1klx_A Cysteine rich protein B 98.6 2.8E-07 9.5E-12 82.5 11.4 118 399-548 9-134 (138)
232 3n71_A Histone lysine methyltr 98.6 2E-07 6.9E-12 101.4 11.5 132 357-538 314-462 (490)
233 1klx_A Cysteine rich protein B 98.5 1.2E-06 4.1E-11 78.3 14.0 114 269-417 8-129 (138)
234 3drz_A BTB/POZ domain-containi 98.5 5E-07 1.7E-11 77.4 10.9 93 57-153 8-106 (107)
235 1pc2_A Mitochondria fission pr 98.5 2.1E-07 7.1E-12 84.5 8.8 90 463-552 18-113 (152)
236 2fnj_C Transcription elongatio 98.5 1.8E-07 6.3E-12 78.5 6.5 80 57-140 3-96 (96)
237 3v7d_A Suppressor of kinetocho 98.5 7.7E-07 2.6E-11 82.7 11.4 96 57-156 9-134 (169)
238 2v5f_A Prolyl 4-hydroxylase su 98.4 7.3E-07 2.5E-11 75.7 9.3 77 476-552 4-88 (104)
239 3bee_A Putative YFRE protein; 98.4 1.1E-06 3.9E-11 73.1 9.7 71 348-418 2-76 (93)
240 3n71_A Histone lysine methyltr 98.4 2.6E-06 8.8E-11 92.7 15.1 132 262-415 315-465 (490)
241 1pc2_A Mitochondria fission pr 98.3 2.5E-06 8.4E-11 77.4 10.7 99 335-439 15-119 (152)
242 3u64_A Protein TP_0956; tetrat 98.3 2.9E-05 9.8E-10 77.7 17.8 84 335-418 180-273 (301)
243 2uy1_A Cleavage stimulation fa 98.3 0.00067 2.3E-08 73.7 30.2 342 213-576 11-412 (493)
244 3qww_A SET and MYND domain-con 98.1 3.3E-06 1.1E-10 90.4 8.5 65 477-541 340-412 (433)
245 1vcb_B Protein (elongin C); tu 98.1 6.6E-06 2.3E-10 70.9 6.9 80 57-140 19-112 (112)
246 2v5f_A Prolyl 4-hydroxylase su 98.0 1.6E-05 5.4E-10 67.3 8.6 88 384-522 4-91 (104)
247 2uy1_A Cleavage stimulation fa 97.9 0.00039 1.3E-08 75.6 18.9 78 270-347 28-118 (493)
248 3qwp_A SET and MYND domain-con 97.8 2.9E-05 1E-09 83.0 8.2 64 477-540 329-400 (429)
249 3qww_A SET and MYND domain-con 97.8 3.2E-05 1.1E-09 82.8 8.2 82 333-414 313-411 (433)
250 1nzn_A CGI-135 protein, fissio 97.8 5.9E-05 2E-09 66.0 8.4 89 465-553 23-117 (126)
251 3qwp_A SET and MYND domain-con 97.7 0.0001 3.5E-09 78.7 11.0 114 360-523 295-425 (429)
252 3drx_A BTB/POZ domain-containi 97.7 7.8E-05 2.7E-09 70.3 8.2 93 57-153 14-112 (202)
253 1nzn_A CGI-135 protein, fissio 97.4 0.00096 3.3E-08 58.3 10.2 98 335-438 18-121 (126)
254 1y8m_A FIS1; mitochondria, unk 96.8 0.012 4.1E-07 52.3 11.1 91 463-553 22-120 (144)
255 3kvt_A Potassium channel prote 96.6 0.0015 5.2E-08 56.3 4.3 84 57-144 7-93 (115)
256 3o48_A Mitochondria fission 1 96.6 0.0062 2.1E-07 53.4 8.2 79 475-553 38-121 (134)
257 4g26_A Pentatricopeptide repea 96.6 0.066 2.3E-06 58.0 18.2 166 355-547 29-213 (501)
258 2nz0_B Potassium voltage-gated 96.6 0.0029 9.9E-08 56.4 6.0 84 57-147 37-126 (140)
259 1s1g_A Potassium voltage-gated 96.4 0.0032 1.1E-07 55.0 5.0 84 57-147 15-104 (124)
260 3o48_A Mitochondria fission 1 96.2 0.033 1.1E-06 48.8 10.3 83 351-439 39-126 (134)
261 1y8m_A FIS1; mitochondria, unk 96.2 0.083 2.8E-06 46.8 12.8 85 348-438 35-124 (144)
262 1t1d_A Protein (potassium chan 96.1 0.0032 1.1E-07 52.8 3.3 86 57-148 3-95 (100)
263 1nn7_A Potassium channel KV4.2 96.0 0.0023 7.9E-08 54.2 2.0 85 57-148 2-92 (105)
264 4g26_A Pentatricopeptide repea 96.0 0.37 1.3E-05 52.1 20.1 157 262-419 32-211 (501)
265 2ff4_A Probable regulatory pro 95.3 0.43 1.5E-05 49.8 16.5 76 481-556 175-257 (388)
266 1qsa_A Protein (soluble lytic 95.2 4.8 0.00016 44.5 25.9 238 308-547 55-354 (618)
267 1zbp_A Hypothetical protein VP 95.2 0.13 4.4E-06 50.6 11.3 129 360-511 5-134 (273)
268 4h7y_A Dual specificity protei 95.0 0.18 6.3E-06 45.1 10.6 115 382-514 9-131 (161)
269 3ffl_A Anaphase-promoting comp 94.4 0.15 5.2E-06 46.4 8.9 59 353-411 64-148 (167)
270 3ffl_A Anaphase-promoting comp 93.3 0.11 3.6E-06 47.4 5.6 68 475-542 18-94 (167)
271 2ff4_A Probable regulatory pro 93.2 1 3.5E-05 46.8 13.9 99 299-413 126-233 (388)
272 1qsa_A Protein (soluble lytic 92.5 4.6 0.00016 44.6 18.6 234 297-563 223-485 (618)
273 4gns_B Protein CSD3, chitin bi 91.6 0.81 2.8E-05 51.8 11.3 57 478-534 338-394 (754)
274 3kae_A CDC27, possible protein 91.6 2.9 0.0001 38.1 12.5 117 345-511 26-148 (242)
275 1ya0_A SMG-7 transcript varian 91.3 0.63 2.2E-05 50.1 9.7 59 463-521 172-230 (497)
276 3mkq_A Coatomer beta'-subunit; 91.1 3.9 0.00013 45.8 16.6 49 359-411 659-707 (814)
277 4h7y_A Dual specificity protei 90.5 3.1 0.00011 37.2 11.6 51 335-385 77-127 (161)
278 4gns_B Protein CSD3, chitin bi 90.2 1.2 4.2E-05 50.3 11.1 54 358-411 343-397 (754)
279 3kae_A CDC27, possible protein 88.7 8.4 0.00029 35.1 13.0 68 352-419 62-148 (242)
280 1zbp_A Hypothetical protein VP 88.2 1.2 4.1E-05 43.7 7.9 60 486-545 6-65 (273)
281 3mkq_A Coatomer beta'-subunit; 82.7 23 0.0008 39.3 16.5 47 520-575 745-793 (814)
282 3txn_A 26S proteasome regulato 82.6 48 0.0016 34.2 18.7 168 255-444 18-200 (394)
283 2r9r_B Paddle chimera voltage 82.1 1.1 3.8E-05 48.5 4.8 81 57-144 54-141 (514)
284 4fhn_B Nucleoporin NUP120; pro 81.6 9.3 0.00032 45.4 13.0 140 356-535 816-962 (1139)
285 4b4t_S RPN3, 26S proteasome re 79.8 1.2 4.3E-05 47.8 4.1 134 359-512 143-305 (523)
286 3mkq_B Coatomer subunit alpha; 79.7 36 0.0012 31.0 14.2 51 358-412 11-61 (177)
287 2eqx_A Kelch repeat and BTB do 79.5 2 6.7E-05 35.7 4.5 34 123-156 8-41 (105)
288 3txn_A 26S proteasome regulato 78.9 18 0.0006 37.6 12.5 59 482-540 104-168 (394)
289 4fhn_B Nucleoporin NUP120; pro 76.3 20 0.00068 42.6 13.6 135 265-409 821-962 (1139)
290 2vkp_A BTB/POZ domain-containi 75.1 2.4 8.2E-05 34.9 3.9 33 155-188 77-109 (109)
291 1ya0_A SMG-7 transcript varian 72.9 7.6 0.00026 41.7 8.0 75 480-554 155-230 (497)
292 3spa_A Mtrpol, DNA-directed RN 67.2 62 0.0021 37.9 14.1 84 351-434 164-252 (1134)
293 1o9d_A 14-3-3-like protein C; 64.3 1.1E+02 0.0036 29.7 15.7 69 493-575 151-234 (260)
294 3htm_A Speckle-type POZ protei 64.2 5.3 0.00018 35.7 3.9 34 123-156 132-165 (172)
295 2crb_A Nuclear receptor bindin 62.9 8.6 0.0003 31.0 4.3 29 352-380 15-43 (97)
296 2crb_A Nuclear receptor bindin 62.1 7.4 0.00025 31.4 3.8 29 477-505 15-43 (97)
297 4b4t_R RPN7, 26S proteasome re 62.0 31 0.0011 35.9 10.0 67 349-415 128-198 (429)
298 3spa_A Mtrpol, DNA-directed RN 57.6 98 0.0034 36.2 13.5 66 353-418 128-200 (1134)
299 1r29_A B-cell lymphoma 6 prote 57.4 8.5 0.00029 32.6 3.8 32 155-187 95-126 (127)
300 2yy9_A Zinc finger and BTB dom 56.3 4.5 0.00015 35.0 1.9 35 155-190 87-121 (135)
301 2z8h_A Transcription regulator 54.7 3.6 0.00012 35.7 0.9 34 155-189 101-134 (138)
302 3hqi_A Speckle-type POZ protei 52.3 9.9 0.00034 37.7 3.9 34 123-156 272-305 (312)
303 3ubw_A 14-3-3E, 14-3-3 protein 51.0 1.8E+02 0.0061 28.1 16.6 69 493-575 172-255 (261)
304 2vpk_A Myoneurin; transcriptio 50.3 11 0.00039 31.2 3.4 30 155-185 86-115 (116)
305 1buo_A POZ domain, protein (pr 49.7 16 0.00055 30.6 4.3 32 155-187 89-120 (121)
306 2q81_A MIZ-1 protein; BTB/POZ 49.5 13 0.00046 31.0 3.8 30 155-185 88-117 (119)
307 2plx_B Peptide inhibitor; heli 49.0 10 0.00035 22.0 1.9 22 162-183 2-23 (26)
308 3ltm_A Alpha-REP4; protein eng 48.8 1.5E+02 0.005 26.5 11.3 26 478-504 127-152 (211)
309 3b84_A Zinc finger and BTB dom 48.3 8.3 0.00028 32.3 2.2 32 155-187 86-117 (119)
310 3uzd_A 14-3-3 protein gamma; s 47.9 1.9E+02 0.0066 27.6 18.4 69 493-575 147-230 (248)
311 3re2_A Predicted protein; meni 47.4 34 0.0012 34.8 6.6 44 337-380 276-324 (472)
312 2if5_A Zinc finger and BTB dom 46.3 19 0.00064 29.9 4.2 29 155-184 91-119 (120)
313 3u84_A Menin; MLL, JUND, ledgf 45.2 37 0.0013 35.1 6.6 34 347-380 313-346 (550)
314 4b4t_R RPN7, 26S proteasome re 44.9 60 0.0021 33.7 8.8 98 289-413 132-236 (429)
315 3ax2_A Mitochondrial import re 44.9 30 0.001 26.6 4.6 32 356-387 21-52 (73)
316 2br9_A 14-3-3E, 14-3-3 protein 43.7 2.2E+02 0.0074 27.0 16.1 69 493-575 146-229 (234)
317 4gq4_A Menin; tumor suppressor 42.8 1.2E+02 0.0041 31.4 10.0 97 462-572 283-391 (489)
318 4b4t_S RPN3, 26S proteasome re 41.7 75 0.0026 34.0 8.8 68 356-423 235-308 (523)
319 2ijq_A Hypothetical protein; s 41.4 71 0.0024 28.5 7.3 60 481-540 36-104 (161)
320 3esl_A Checkpoint serine/threo 38.1 1E+02 0.0034 28.7 8.0 99 472-574 75-185 (202)
321 2w2u_A Hypothetical P60 katani 38.0 30 0.001 27.3 3.8 33 515-554 23-55 (83)
322 2ast_A S-phase kinase-associat 34.8 54 0.0018 29.0 5.5 65 123-190 49-128 (159)
323 3hve_A Gigaxonin; ubiquitin, c 34.6 22 0.00075 34.0 3.1 34 123-156 131-164 (256)
324 2w2u_A Hypothetical P60 katani 34.5 49 0.0017 26.0 4.5 30 255-284 18-47 (83)
325 2v6y_A AAA family ATPase, P60 34.2 37 0.0013 26.6 3.8 31 517-554 17-47 (83)
326 3i3n_A Kelch-like protein 11; 33.6 29 0.001 33.6 3.9 33 123-155 139-171 (279)
327 2ppi_A Gigaxonin; BTB domain, 31.8 19 0.00066 31.3 2.0 29 155-184 115-143 (144)
328 2ijq_A Hypothetical protein; s 31.8 2.7E+02 0.0093 24.7 10.0 87 356-443 36-133 (161)
329 3j0g_M E3 protein; alphavirus, 31.8 24 0.0008 25.7 2.0 14 568-581 44-57 (59)
330 4a1g_A Mitotic checkpoint seri 31.5 1.7E+02 0.0058 25.7 8.1 91 463-553 48-143 (152)
331 4eoz_A Speckle-type POZ protei 31.5 20 0.00068 30.7 2.0 32 158-189 93-124 (145)
332 3m5b_A Zinc finger and BTB dom 30.9 34 0.0012 28.6 3.3 31 155-186 87-117 (119)
333 1om2_A Protein (mitochondrial 30.9 52 0.0018 26.7 4.1 33 356-388 24-56 (95)
334 2v6y_A AAA family ATPase, P60 29.6 48 0.0016 26.0 3.8 27 480-506 14-40 (83)
335 4a5x_A MITD1, MIT domain-conta 29.2 52 0.0018 26.1 3.9 25 515-539 20-44 (86)
336 2v6x_A Vacuolar protein sortin 29.1 50 0.0017 25.9 3.8 23 517-539 19-41 (85)
337 4ady_A RPN2, 26S proteasome re 28.9 7.2E+02 0.025 28.6 14.7 202 354-585 457-666 (963)
338 2cwy_A Hypothetical protein TT 28.9 1.2E+02 0.004 24.4 6.1 56 481-539 5-67 (94)
339 4gq2_M Nucleoporin NUP120; bet 27.5 3.4E+02 0.012 31.2 12.1 91 482-579 815-928 (950)
340 4gq2_M Nucleoporin NUP120; bet 27.3 6.2E+02 0.021 29.0 14.2 111 358-509 816-929 (950)
341 1wfd_A Hypothetical protein 15 27.0 57 0.0019 26.2 3.8 21 519-539 23-43 (93)
342 2wpv_A GET4, UPF0363 protein Y 27.0 4.6E+02 0.016 25.8 16.0 62 475-536 132-213 (312)
343 1fs1_B SKP1, cyclin A/CDK2-ass 25.7 2E+02 0.0067 24.7 7.5 83 105-190 24-123 (141)
344 2v6x_A Vacuolar protein sortin 25.7 1.2E+02 0.004 23.6 5.5 27 480-506 16-42 (85)
345 2cpt_A SKD1 protein, vacuolar 25.1 59 0.002 27.4 3.7 18 522-539 29-46 (117)
346 4b4t_P 26S proteasome regulato 24.5 5.8E+02 0.02 26.2 12.3 99 355-453 140-247 (445)
347 3ph0_C ASCG; type III secretio 24.0 1.3E+02 0.0046 21.8 4.7 42 489-531 18-60 (61)
348 2dl1_A Spartin; SPG20, MIT, st 23.9 87 0.003 26.3 4.4 11 406-416 50-60 (116)
349 4a5x_A MITD1, MIT domain-conta 23.8 72 0.0025 25.2 3.8 27 480-506 19-45 (86)
350 2cmy_B Beta trypsin, veronica 23.8 19 0.00066 22.2 0.3 22 162-183 7-28 (34)
351 2wpv_A GET4, UPF0363 protein Y 23.7 5.3E+02 0.018 25.3 13.9 41 495-535 118-158 (312)
352 3ga1_A Nucleus accumbens-assoc 23.7 12 0.0004 31.8 -1.0 33 154-187 95-127 (129)
353 3mkq_B Coatomer subunit alpha; 23.5 1.8E+02 0.0062 26.3 6.9 66 475-548 32-97 (177)
354 4aez_C MAD3, mitotic spindle c 23.1 3.1E+02 0.011 25.7 8.7 48 493-540 130-179 (223)
355 3ax2_A Mitochondrial import re 22.6 1.2E+02 0.0042 23.2 4.7 29 483-511 23-51 (73)
356 4gq4_A Menin; tumor suppressor 22.6 1.6E+02 0.0054 30.5 6.9 43 337-379 283-330 (489)
357 3iqu_A 14-3-3 protein sigma; s 21.7 5.1E+02 0.017 24.4 15.5 40 353-392 9-50 (236)
358 2npm_A 14-3-3 domain containin 21.7 5.4E+02 0.018 24.7 15.7 69 493-575 172-254 (260)
359 1wfd_A Hypothetical protein 15 21.3 84 0.0029 25.1 3.8 43 481-523 19-68 (93)
360 2cpt_A SKD1 protein, vacuolar 21.0 82 0.0028 26.5 3.8 26 481-506 22-47 (117)
361 3u84_A Menin; MLL, JUND, ledgf 20.6 2.9E+02 0.0099 28.6 8.2 28 510-537 317-344 (550)
362 2wvi_A Mitotic checkpoint seri 20.4 2.9E+02 0.0098 24.6 7.5 91 463-553 43-138 (164)
No 1
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=100.00 E-value=2.9e-31 Score=279.42 Aligned_cols=313 Identities=16% Similarity=0.093 Sum_probs=203.0
Q ss_pred chhHHHHHHHHhhcchhhhHHHHHHHHhhhHHhhhccHHHHHHHHHHHhhcccc--chhhhhHHHHHHhCChHHHHHHHH
Q 007721 235 SNTTVMLLERLGECSTERWQRMLALHQLGCVMFEREEYKDACYYFEAAADAGHI--YSLAGLARAKYKVGQQYSAYKLIN 312 (591)
Q Consensus 235 ~~~~v~lLe~~~~~~~~~~~~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~~--~a~~~la~~~~~~G~~~~A~~~~~ 312 (591)
.+.+..+++.+++..+. ...+++.+|.++...|++++|+..|++++++.|. .++..+|.++...|++++|+..+.
T Consensus 49 ~~~a~~~~~~a~~~~p~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 125 (388)
T 1w3b_A 49 LDRSAHFSTLAIKQNPL---LAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 125 (388)
T ss_dssp HHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCC---chHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 44556666665544333 2456777777777777777777777777777443 356677777777777777777777
Q ss_pred HHHHhcCCCHHHHHHHHhc----CCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHH
Q 007721 313 SIISEHKPTGWMYQERSLY----NLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDC 387 (591)
Q Consensus 313 ~aI~~~~~~g~a~~~r~~y----~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~ 387 (591)
+++...|+...++...+.. +..++|+..|+++++.+|+++.+|.++|.++...|++++|+..|+++++++|+ ...
T Consensus 126 ~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 205 (388)
T 1w3b_A 126 SALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA 205 (388)
T ss_dssp HHHHHCTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHH
Confidence 7777777766665555431 23377777777777777777777777777777777777777777777777775 566
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCc---------------hhhhhhhhh
Q 007721 388 LELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSP---------------ADCWIKLYD 452 (591)
Q Consensus 388 ~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~---------------a~~~~~l~~ 452 (591)
+..+|.++...|++++|+..|+++++++|++...+.. ++.+.....++++ .++|..+..
T Consensus 206 ~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~------l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 279 (388)
T 1w3b_A 206 YINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGN------LACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLAN 279 (388)
T ss_dssp HHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHH------HHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHH------HHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 6777777777777777777777777777776432221 1222222222222 233333433
Q ss_pred ccccccccc-hHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHH
Q 007721 453 RWSSVDDIG-SLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEAL 531 (591)
Q Consensus 453 ~~~~~~~~~-al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl 531 (591)
.+...+++. |+..++++++++|.++.+++++|.++..+|++++|+..++++++++|+++.++.++|+++..+|++++|+
T Consensus 280 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 359 (388)
T 1w3b_A 280 ALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEAL 359 (388)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHH
Confidence 333344444 5666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHHHHhhcccccHH-HHHHHHHHhhh
Q 007721 532 SRAEKSISIERTFE-AFFLKAYILAD 556 (591)
Q Consensus 532 ~~~e~ai~l~~~~~-~~~~~~~~~~~ 556 (591)
..|+++++++|++. +++..|.++..
T Consensus 360 ~~~~~a~~~~p~~~~a~~~lg~~~~~ 385 (388)
T 1w3b_A 360 MHYKEAIRISPTFADAYSNMGNTLKE 385 (388)
T ss_dssp HHHHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCHHHHHhHHHHHHH
Confidence 66666666666665 66666665543
No 2
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.98 E-value=1.6e-29 Score=266.08 Aligned_cols=330 Identities=13% Similarity=0.032 Sum_probs=279.0
Q ss_pred chhHHHHHHHHhhcchhhhHHHHHHHHhhhHHhhhccHHHHHHHHHHHhhcccc--chhhhhHHHHHHhCChHHHHHHHH
Q 007721 235 SNTTVMLLERLGECSTERWQRMLALHQLGCVMFEREEYKDACYYFEAAADAGHI--YSLAGLARAKYKVGQQYSAYKLIN 312 (591)
Q Consensus 235 ~~~~v~lLe~~~~~~~~~~~~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~~--~a~~~la~~~~~~G~~~~A~~~~~ 312 (591)
.+.+...++.+++..|+. ..++..+|.++...|++++|...++++++..|. .++..+|.++...|++++|+..|.
T Consensus 15 ~~~A~~~~~~~~~~~p~~---~~~~~~l~~~~~~~~~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 91 (388)
T 1w3b_A 15 FEAAERHCMQLWRQEPDN---TGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYR 91 (388)
T ss_dssp HHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 556777777776655553 456788999999999999999999999998654 478899999999999999999999
Q ss_pred HHHHhcCCCHHHHHHHHh----cCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHH
Q 007721 313 SIISEHKPTGWMYQERSL----YNLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDC 387 (591)
Q Consensus 313 ~aI~~~~~~g~a~~~r~~----y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~ 387 (591)
+++...|+...++.+.+. .+..++|+..|+++++++|+...++.++|.++..+|++++|+..|+++++.+|+ ...
T Consensus 92 ~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 171 (388)
T 1w3b_A 92 HALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVA 171 (388)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHcCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHH
Confidence 999999998887777653 244499999999999999999999999999999999999999999999999996 788
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCc---------------hhhhhhhhh
Q 007721 388 LELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSP---------------ADCWIKLYD 452 (591)
Q Consensus 388 ~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~---------------a~~~~~l~~ 452 (591)
+.++|.++...|++++|+..|+++++++|++.. +...++.+....+++++ +.+|..+..
T Consensus 172 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~------~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 245 (388)
T 1w3b_A 172 WSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD------AYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLAC 245 (388)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHH------HHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHH
Confidence 899999999999999999999999999999854 33334444444444443 345555555
Q ss_pred ccccccccc-hHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHH
Q 007721 453 RWSSVDDIG-SLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEAL 531 (591)
Q Consensus 453 ~~~~~~~~~-al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl 531 (591)
.....+++. |+..++++++++|.++.+++++|.++.++|++++|+..++++++++|++++++.++|.++..+|++++|+
T Consensus 246 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 325 (388)
T 1w3b_A 246 VYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAV 325 (388)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHH
Confidence 555566766 8889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccccHH-HHHHHHHHhhhcCCCCCchhHHHHHHHHHhcC
Q 007721 532 SRAEKSISIERTFE-AFFLKAYILADTNLDPESSTYVIQLLEEALRC 577 (591)
Q Consensus 532 ~~~e~ai~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (591)
..|++++++.|++. +++..|.++....- -..-++.+++|++.
T Consensus 326 ~~~~~al~~~p~~~~~~~~l~~~~~~~g~----~~~A~~~~~~a~~~ 368 (388)
T 1w3b_A 326 RLYRKALEVFPEFAAAHSNLASVLQQQGK----LQEALMHYKEAIRI 368 (388)
T ss_dssp HHHHHHTTSCTTCHHHHHHHHHHHHTTTC----CHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHHcCC----HHHHHHHHHHHHhh
Confidence 99999999999876 88888888876542 34456777787765
No 3
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.97 E-value=1.8e-31 Score=268.26 Aligned_cols=197 Identities=13% Similarity=0.162 Sum_probs=159.7
Q ss_pred cccCCCCCCceEEEEcCeEEEhhHHHHhhcCHHHHHhhcCCCC--CCCCceeEecCCCCCHHHHHHHHHHHhcCCCCCCC
Q 007721 47 VCLSLEEDDSVTFCVRDKEISFVRNKIASLSSPFKAMLYGGFV--ESKRKTIDFSHDGVSVEGLRAVEVYTRTSRVDLFC 124 (591)
Q Consensus 47 ~~~~~~~~~~V~f~v~g~~~~aHr~iLaa~S~yF~amf~~~~~--Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~~~~~~ 124 (591)
+...++..+||+|+|||++|+|||.||+++|+||++||++++. |+...+|++ +++++++|+.+++|+|||++. ++
T Consensus 24 ~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l--~~v~~~~f~~ll~~~Yt~~~~-i~ 100 (256)
T 3hve_A 24 SFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIEL--EGISVMVMREILDYIFSGQIR-LN 100 (256)
T ss_dssp TCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEEC--SSCCHHHHHHHHHHHHHSCCC-CC
T ss_pred HHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEe--CCCCHHHHHHHHhhccCCCCc-cc
Confidence 3445667778999999999999999999999999999999988 677789999 999999999999999999999 99
Q ss_pred hhHHHHHHHHHhhhChHHHHHHHHHHHHhhcCCHHhHHHHHHHHHHhChHHHHHHHHHHHHhhhHhhhCCccccccccCc
Q 007721 125 PGIVLELLSFANRFCCEEMKSACDAHLASLVGDIEDALILIDYGLEERATLLVASCLQVLLRELPSSLYNPKVMKIFCSS 204 (591)
Q Consensus 125 ~~~v~~lL~~A~~~~i~~L~~~C~~~L~~~i~~~~n~~~ll~~A~~~~~~~L~~~c~~~i~~n~~~v~~~~~f~~l~~~~ 204 (591)
.+++.+++.+|++|+++.|++.|++||.+.++ ++||+.++.+|..|+++.|.+.|.+||.+||.++.++++|.+|-. .
T Consensus 101 ~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~-~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~~-~ 178 (256)
T 3hve_A 101 EDTIQDVVQAADLLLLTDLKTLCCEFLEGCIA-AENCIGIRDFALHYCLHHVHYLATEYLETHFRDVSSTEEFLELSP-Q 178 (256)
T ss_dssp -CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCC-SSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTCHHHHSSCH-H
T ss_pred HhHHHHHHHHHHHHChHHHHHHHHHHHHhhCC-HhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhCCcchhcCCH-H
Confidence 99999999999999999999999999999999 899999999999999999999999999999999999999988621 1
Q ss_pred hhhhhH----hhhcchhHHHHHHHHHhhhhccccchhHHHHHHHHhhcc
Q 007721 205 EATERL----ANVGHASFLLYYFLSQVAMEKDRVSNTTVMLLERLGECS 249 (591)
Q Consensus 205 ~~~~~~----~~~~~~~~~~~a~Ls~v~~d~~~r~~~~v~lLe~~~~~~ 249 (591)
...+.+ ..|..+..++.+++.|+.++...|..+...+++. +|++
T Consensus 179 ~l~~lL~~d~L~v~~E~~v~~av~~W~~~~~~~R~~~~~~ll~~-VRf~ 226 (256)
T 3hve_A 179 KLKEVISLEKLNVGNERYVFEAVIRWIAHDTEIRKVHMKDVMSA-LWVS 226 (256)
T ss_dssp HHHHHHHCC-------CTTHHHHTTTCCC--CCSTTTHHHHHHH-HHHH
T ss_pred HHHHHHccCCCCCCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHh-CCCC
Confidence 111111 1356677889999999999988888888888876 5554
No 4
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.97 E-value=1.1e-30 Score=265.96 Aligned_cols=196 Identities=18% Similarity=0.241 Sum_probs=165.9
Q ss_pred CCCCCCceEEEEc---CeEEEhhHHHHhhcCHHHHHhhcCCCCCCCCceeEecCC------CCCHHHHHHHHHHHhcCCC
Q 007721 50 SLEEDDSVTFCVR---DKEISFVRNKIASLSSPFKAMLYGGFVESKRKTIDFSHD------GVSVEGLRAVEVYTRTSRV 120 (591)
Q Consensus 50 ~~~~~~~V~f~v~---g~~~~aHr~iLaa~S~yF~amf~~~~~Es~~~~I~l~~~------~vs~~~~~~ll~ylYtg~~ 120 (591)
.++..+||+|+|| |++|+|||.||+++|+||++||+++|+|+...+|+| + ++++++|+.+++|+|||++
T Consensus 28 ~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l--~~~~~~~~v~~~~f~~ll~~~Ytg~~ 105 (279)
T 3i3n_A 28 RQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEM--RKWSSEPGPEPDTVEAVIEYMYTGRI 105 (279)
T ss_dssp HHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEEC--CCCSSTTCSCHHHHHHHHHHHHHSEE
T ss_pred hcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEe--ccccccCCCCHHHHHHHHHhhCcCCc
Confidence 4566778999998 999999999999999999999999999999999999 7 8999999999999999999
Q ss_pred CCCChhHHHHHHHHHhhhChHHHHHHHHHHHHhhcCCHHhHHHHHHHHHHhChHHHHHHHHHHHHhhhHhhhCCcccccc
Q 007721 121 DLFCPGIVLELLSFANRFCCEEMKSACDAHLASLVGDIEDALILIDYGLEERATLLVASCLQVLLRELPSSLYNPKVMKI 200 (591)
Q Consensus 121 ~~~~~~~v~~lL~~A~~~~i~~L~~~C~~~L~~~i~~~~n~~~ll~~A~~~~~~~L~~~c~~~i~~n~~~v~~~~~f~~l 200 (591)
. ++.+++.+++.+|++|+++.|++.|++||.+.++ ++||+.++.+|..|+++.|.+.|.+||.+||.+++.+++|.+|
T Consensus 106 ~-i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~-~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L 183 (279)
T 3i3n_A 106 R-VSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLH-LSNCVAIHSLAHMYTLSQLALKAADMIRRNFHKVIQDEEFYTL 183 (279)
T ss_dssp E-EETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-TTTHHHHHHHHHHTTCHHHHHHHHHHHHHTHHHHTTSSGGGGS
T ss_pred c-cCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCC-cchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhcCcChhcC
Confidence 9 9999999999999999999999999999999999 8999999999999999999999999999999999999999986
Q ss_pred ccCchhhhhH----hhhcchhHHHHHHHHHhhhhccccchhHHHHHHHHhhcchh
Q 007721 201 FCSSEATERL----ANVGHASFLLYYFLSQVAMEKDRVSNTTVMLLERLGECSTE 251 (591)
Q Consensus 201 ~~~~~~~~~~----~~~~~~~~~~~a~Ls~v~~d~~~r~~~~v~lLe~~~~~~~~ 251 (591)
-. ....+.+ ..+..+..++.+++.|+.++...|..+...+++. +|++..
T Consensus 184 ~~-~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~~~~r~~~~~~ll~~-VRf~l~ 236 (279)
T 3i3n_A 184 PF-HLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKL-LRLSQM 236 (279)
T ss_dssp CH-HHHHHHHTCSSCCCSCHHHHHHHHHHHHHTTHHHHTTTHHHHHTT-SCGGGS
T ss_pred CH-HHHHHHhcCcCCCCCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHh-cCCCCC
Confidence 21 1111111 1356678899999999999988888888888875 666543
No 5
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.96 E-value=1.9e-26 Score=236.87 Aligned_cols=312 Identities=12% Similarity=-0.013 Sum_probs=255.5
Q ss_pred HHHHHHhhhhccccchhHHHHHHHHhhcchhhhHHHHHHHHhhhHHhhhccHHHHHHHHHHHhhccc--cchhhhhHHHH
Q 007721 221 YYFLSQVAMEKDRVSNTTVMLLERLGECSTERWQRMLALHQLGCVMFEREEYKDACYYFEAAADAGH--IYSLAGLARAK 298 (591)
Q Consensus 221 ~a~Ls~v~~d~~~r~~~~v~lLe~~~~~~~~~~~~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~--~~a~~~la~~~ 298 (591)
+..++........ .+.+...+++++...+.. ..+++.+|.++...|++++|+..|+++++..+ ..++..+|.++
T Consensus 6 ~~~~~~~~~~~g~-~~~A~~~~~~~l~~~p~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 81 (359)
T 3ieg_A 6 HLELGKKLLAAGQ-LADALSQFHAAVDGDPDN---YIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLL 81 (359)
T ss_dssp HHHHHHHHHHTTC-HHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC-HHHHHHHHHHHHhhCccc---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHH
Confidence 3445555555444 778888998887755543 56889999999999999999999999999854 45788899999
Q ss_pred HHhCChHHHHHHHHHHHHhcC---CCHHHHHHHH----------------hcCCcHHHHHHHHHHHHcCCCChHHHHhHH
Q 007721 299 YKVGQQYSAYKLINSIISEHK---PTGWMYQERS----------------LYNLGREKIVDLNYASELDPTLSFPYKYRA 359 (591)
Q Consensus 299 ~~~G~~~~A~~~~~~aI~~~~---~~g~a~~~r~----------------~y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg 359 (591)
...|++++|+..+.+++...| +...++...+ ..+..++|+..|+++++.+|+++.++..+|
T Consensus 82 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 161 (359)
T 3ieg_A 82 LKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRA 161 (359)
T ss_dssp HHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 999999999999999999999 6655554331 123339999999999999999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhh
Q 007721 360 VAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHV 438 (591)
Q Consensus 360 ~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~ 438 (591)
.++..+|++++|+..++++++++|+ +..+..+|.++..+|++++|+..|+++++++|++... ......+....
T Consensus 162 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~------~~~~~~~~~~~ 235 (359)
T 3ieg_A 162 ECFIKEGEPRKAISDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRC------FAHYKQVKKLN 235 (359)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH------HHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccchHH------HHHHHHHHHHH
Confidence 9999999999999999999999995 7888999999999999999999999999999998542 11111111111
Q ss_pred cccCchhhhhhhhhccccccccc-hHHHHHHHHHcCCCCch----hHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHH
Q 007721 439 RSWSPADCWIKLYDRWSSVDDIG-SLAVINQMLINDPGKSF----LRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHER 513 (591)
Q Consensus 439 ~~~~~a~~~~~l~~~~~~~~~~~-al~~~~~al~~~P~~~~----~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a 513 (591)
..+..+ ..+...+++. |+..++++++.+|.++. ++..+|.++..+|++++|+..++++++++|+++.+
T Consensus 236 ~~~~~a-------~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 308 (359)
T 3ieg_A 236 KLIESA-------EELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNA 308 (359)
T ss_dssp HHHHHH-------HHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHH-------HHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHH
Confidence 111112 1122223344 58899999999999984 46789999999999999999999999999999999
Q ss_pred HHhHHHHHHHcCCHHHHHHHHHHhhcccccHH-HHHH
Q 007721 514 LVYEGWILYDTGHREEALSRAEKSISIERTFE-AFFL 549 (591)
Q Consensus 514 ~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~-~~~~ 549 (591)
+.++|.+++.+|++++|+..|+++++++|++. +...
T Consensus 309 ~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~ 345 (359)
T 3ieg_A 309 LKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREG 345 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChHHHHH
Confidence 99999999999999999999999999999977 4433
No 6
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.96 E-value=7.7e-27 Score=249.45 Aligned_cols=316 Identities=11% Similarity=-0.005 Sum_probs=260.0
Q ss_pred HHHHHHHhhhhccccchhHHHHHHHHhhcchhhhHHHHHHHHhhhHHhhhccHHHHHHHHHHHhhccc--cchhhhhHHH
Q 007721 220 LYYFLSQVAMEKDRVSNTTVMLLERLGECSTERWQRMLALHQLGCVMFEREEYKDACYYFEAAADAGH--IYSLAGLARA 297 (591)
Q Consensus 220 ~~a~Ls~v~~d~~~r~~~~v~lLe~~~~~~~~~~~~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~--~~a~~~la~~ 297 (591)
.+..++........ .+.+..+++++++..+. ...+++.+|.++...|++++|+..|+++++.++ ..++..+|.+
T Consensus 28 ~~~~~~~~~~~~g~-~~~A~~~~~~~l~~~p~---~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 103 (450)
T 2y4t_A 28 KHLELGKKLLAAGQ-LADALSQFHAAVDGDPD---NYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHL 103 (450)
T ss_dssp HHHHHHHHHHHTTC-HHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCC-HHHHHHHHHHHHHhCCc---cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 34555555555444 77788899887765444 367889999999999999999999999999854 4578889999
Q ss_pred HHHhCChHHHHHHHHHHHHhcCCCH---HHHHHH------------H----hcCCcHHHHHHHHHHHHcCCCChHHHHhH
Q 007721 298 KYKVGQQYSAYKLINSIISEHKPTG---WMYQER------------S----LYNLGREKIVDLNYASELDPTLSFPYKYR 358 (591)
Q Consensus 298 ~~~~G~~~~A~~~~~~aI~~~~~~g---~a~~~r------------~----~y~~~~eA~~dl~~Ai~LdP~~~~ay~~r 358 (591)
+..+|++++|...+.+++...|+.. .++... + ..+..++|+..|+++++++|+++.++.++
T Consensus 104 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 183 (450)
T 2y4t_A 104 LLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELRELR 183 (450)
T ss_dssp HHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 9999999999999999999999766 443322 1 11333999999999999999999999999
Q ss_pred HHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhh
Q 007721 359 AVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHH 437 (591)
Q Consensus 359 g~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~ 437 (591)
|.++...|++++|+..|+++++.+|+ +..+..+|.++...|++++|+..|+++++++|++...... ...+...
T Consensus 184 ~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~------~~~~~~~ 257 (450)
T 2y4t_A 184 AECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAH------YKQVKKL 257 (450)
T ss_dssp HHHHHHTTCGGGGHHHHHHHHHHHCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH------HHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHH------HHHHHHH
Confidence 99999999999999999999999995 7888999999999999999999999999999998543221 1111111
Q ss_pred hcccCchhhhhhhhhccccccccc-hHHHHHHHHHcCCCCch----hHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHH
Q 007721 438 VRSWSPADCWIKLYDRWSSVDDIG-SLAVINQMLINDPGKSF----LRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHE 512 (591)
Q Consensus 438 ~~~~~~a~~~~~l~~~~~~~~~~~-al~~~~~al~~~P~~~~----~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~ 512 (591)
. .+..++..+...+++. |+..++++++++|.++. ++.++|.++.++|++++|+..++++++++|++++
T Consensus 258 ~-------~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~ 330 (450)
T 2y4t_A 258 N-------KLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVN 330 (450)
T ss_dssp H-------HHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred H-------HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHH
Confidence 1 1111222222234444 68899999999999854 8999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH-HHHHHHH
Q 007721 513 RLVYEGWILYDTGHREEALSRAEKSISIERTFE-AFFLKAY 552 (591)
Q Consensus 513 a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~-~~~~~~~ 552 (591)
++.++|+++..+|++++|+..|+++++++|+.. ++...+.
T Consensus 331 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 371 (450)
T 2y4t_A 331 ALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEK 371 (450)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchHHHHHHHHH
Confidence 999999999999999999999999999999987 7777773
No 7
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.96 E-value=9.7e-27 Score=236.84 Aligned_cols=276 Identities=11% Similarity=-0.004 Sum_probs=244.9
Q ss_pred HHHHhhhHHhhhccHHHHHHHHHHHhhcccc--chhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhc----
Q 007721 258 ALHQLGCVMFEREEYKDACYYFEAAADAGHI--YSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLY---- 331 (591)
Q Consensus 258 a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~~--~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y---- 331 (591)
.+..+|..+...|++++|+..|+++++..+. .++..++.++...|++++|+..+.+++...|+.+.++...+..
T Consensus 24 ~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 103 (330)
T 3hym_B 24 VVVSLAERHYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMV 103 (330)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHh
Confidence 3566788888999999999999999988553 4666788899999999999999999999999988888777642
Q ss_pred C-CcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHH
Q 007721 332 N-LGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTL 409 (591)
Q Consensus 332 ~-~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~ 409 (591)
+ ..++|+..|+++++++|+++.+|..+|.++..+|++++|+..|++++++.|+ ...+..+|.++...|++++|+..|+
T Consensus 104 ~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 183 (330)
T 3hym_B 104 GHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFS 183 (330)
T ss_dssp CSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3 4488999999999999999999999999999999999999999999999996 6778889999999999999999999
Q ss_pred HHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcC---------CCCchhH
Q 007721 410 ALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLIND---------PGKSFLR 480 (591)
Q Consensus 410 ~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~---------P~~~~~~ 480 (591)
++++++|++. .+...++.+....+++++| +..+++++.+. |..+.++
T Consensus 184 ~al~~~~~~~------~~~~~l~~~~~~~~~~~~A------------------~~~~~~a~~~~~~~~~~~~~~~~~~~~ 239 (330)
T 3hym_B 184 QALSIAPEDP------FVMHEVGVVAFQNGEWKTA------------------EKWFLDALEKIKAIGNEVTVDKWEPLL 239 (330)
T ss_dssp HHHTTCTTCH------HHHHHHHHHHHHTTCHHHH------------------HHHHHHHHHHHTTTSCSCTTTTCCHHH
T ss_pred HHHHhCCCCh------HHHHHHHHHHHHcccHHHH------------------HHHHHHHHHHhhhccccccccHHHHHH
Confidence 9999999873 3444455555555555555 88999999987 8888999
Q ss_pred hhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH-HHHHHHHHhhhc
Q 007721 481 FRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFE-AFFLKAYILADT 557 (591)
Q Consensus 481 ~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~-~~~~~~~~~~~~ 557 (591)
+++|.++..+|++++|+..++++++++|++++++.++|+++..+|++++|+..|+++++++|++. +++..|.++.-.
T Consensus 240 ~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 317 (330)
T 3hym_B 240 NNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMY 317 (330)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999877 888888887543
No 8
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.95 E-value=1.7e-27 Score=253.00 Aligned_cols=248 Identities=13% Similarity=-0.031 Sum_probs=195.1
Q ss_pred hhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHh----cCC-cHHHHHHHHHHHHcCCCChHHHHhHHHHHHH
Q 007721 290 SLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSL----YNL-GREKIVDLNYASELDPTLSFPYKYRAVAKME 364 (591)
Q Consensus 290 a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~----y~~-~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~ 364 (591)
++..+|.++...|++++|+..+.++|..+|+...+|.+++. .+. .++|+..|++|++++|+++.+|++||.++..
T Consensus 99 a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~ 178 (382)
T 2h6f_A 99 VYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEW 178 (382)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 34444455555555555555555555555555555544442 122 3788999999999999999999999999999
Q ss_pred hCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhh-hcccC
Q 007721 365 EGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHH-VRSWS 442 (591)
Q Consensus 365 l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~-~~~~~ 442 (591)
+|++++|+..|++||+++|+ +.+|++||+++..+|++++|+.+|+++++++|++. .+...++.+... .++.+
T Consensus 179 ~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~------~a~~~lg~~l~~l~~~~~ 252 (382)
T 2h6f_A 179 LRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNN------SVWNQRYFVISNTTGYND 252 (382)
T ss_dssp HTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCH------HHHHHHHHHHHHTTCSCS
T ss_pred ccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHhcCcch
Confidence 99999999999999999995 88899999999999999999999999999999983 333444444333 33334
Q ss_pred chhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhC--CHHHHHHHHHHHHhcCCchHHHHHhHHHH
Q 007721 443 PADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLN--CQKAAMRCLRLARNHSSSEHERLVYEGWI 520 (591)
Q Consensus 443 ~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~--~~~eA~~~~~~Al~l~p~~~~a~~~~G~~ 520 (591)
+|. ...++..++++|+++|++..+|+++|.++..+| ++++|+..++++ +.+|++..++..+|++
T Consensus 253 eA~-------------~~~el~~~~~Al~l~P~~~~a~~~l~~ll~~~g~~~~~~a~~~~~~~-~~~p~~~~al~~La~~ 318 (382)
T 2h6f_A 253 RAV-------------LEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLLDL-QPSHSSPYLIAFLVDI 318 (382)
T ss_dssp HHH-------------HHHHHHHHHHHHHHSTTCHHHHHHHHHHHTTTCGGGCHHHHHHHHHH-TTTCCCHHHHHHHHHH
T ss_pred HHH-------------HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHccCccchHHHHHHHHHh-ccCCCCHHHHHHHHHH
Confidence 441 001257899999999999999999999999988 689999999998 9999999999999999
Q ss_pred HHHcC---------CHHHHHHHHHHh-hcccccHH-HHHHHHHHhhhc
Q 007721 521 LYDTG---------HREEALSRAEKS-ISIERTFE-AFFLKAYILADT 557 (591)
Q Consensus 521 l~~~g---------~~eeAl~~~e~a-i~l~~~~~-~~~~~~~~~~~~ 557 (591)
+..+| .+++|+..|+++ ++++|... .|..++-+|...
T Consensus 319 ~~~~~~~~~~~~~~~~~~A~~~~~~l~~~~DP~r~~~w~~~~~~l~~~ 366 (382)
T 2h6f_A 319 YEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIGRSLQSK 366 (382)
T ss_dssp HHHHHHTTCSSHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHH
T ss_pred HHHHhcccccchHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHH
Confidence 99985 369999999999 99999998 666666666543
No 9
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.95 E-value=9.6e-28 Score=226.08 Aligned_cols=146 Identities=18% Similarity=0.244 Sum_probs=132.5
Q ss_pred cccCCCCCCceEEEEcCeEEEhhHHHHhhcCHHHHHhhcCCCCCCCCceeEecCCCCCHHHHHHHHHHHhcCCCCCCChh
Q 007721 47 VCLSLEEDDSVTFCVRDKEISFVRNKIASLSSPFKAMLYGGFVESKRKTIDFSHDGVSVEGLRAVEVYTRTSRVDLFCPG 126 (591)
Q Consensus 47 ~~~~~~~~~~V~f~v~g~~~~aHr~iLaa~S~yF~amf~~~~~Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~~~~~~~~ 126 (591)
...++...+||+|+|+|+.|+|||.||+++|+||++||+++|.|+...+|.| +++++++|+.+|+|+|||++. ++.+
T Consensus 27 ~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l--~~~~~~~f~~~l~~~Yt~~~~-~~~~ 103 (172)
T 3htm_A 27 GLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEI--NDVEPEVFKEMMCFIYTGKAP-NLDK 103 (172)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEE--CSSCHHHHHHHHHHHHHSCCT-TGGG
T ss_pred HHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEe--cCCCHHHHHHHHHHHhCCCCC-CcHH
Confidence 3345567788999999999999999999999999999999999999999999 999999999999999999999 9999
Q ss_pred HHHHHHHHHhhhChHHHHHHHHHHHHhhcCCHHhHHHHHHHHHHhChHHHHHHHHHHHHhhhHhhhCCcc
Q 007721 127 IVLELLSFANRFCCEEMKSACDAHLASLVGDIEDALILIDYGLEERATLLVASCLQVLLRELPSSLYNPK 196 (591)
Q Consensus 127 ~v~~lL~~A~~~~i~~L~~~C~~~L~~~i~~~~n~~~ll~~A~~~~~~~L~~~c~~~i~~n~~~v~~~~~ 196 (591)
++.+++.+|++|+++.|++.|+++|.+.++ ++||+.++.+|..|+++.|.+.|.+||.+||.+++++++
T Consensus 104 ~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~-~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~~v~~s~~ 172 (172)
T 3htm_A 104 MADDLLAAADKYALERLKVMCEDALCSNLS-VENAAEILILADLHSADQLKTQAVDFINYHATDVLETSG 172 (172)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHTCC-TTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC--------
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999 899999999999999999999999999999999988763
No 10
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.95 E-value=3.9e-25 Score=226.98 Aligned_cols=294 Identities=17% Similarity=0.064 Sum_probs=253.3
Q ss_pred HHHHHHhhhHHhhhccHHHHHHHHHHHhhccc--cchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHh---
Q 007721 256 MLALHQLGCVMFEREEYKDACYYFEAAADAGH--IYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSL--- 330 (591)
Q Consensus 256 ~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~--~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~--- 330 (591)
..++..+|..+...|++++|+..|++++...| ..++..+|.++...|++++|+..+.+++...|+...++...+.
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 82 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLL 82 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHH
Confidence 35678899999999999999999999999854 4578889999999999999999999999999988877777754
Q ss_pred -cCCcHHHHHHHHHHHHcCC---CChHHHHhH------------HHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHH
Q 007721 331 -YNLGREKIVDLNYASELDP---TLSFPYKYR------------AVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAW 393 (591)
Q Consensus 331 -y~~~~eA~~dl~~Ai~LdP---~~~~ay~~r------------g~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~ 393 (591)
.+..++|+..|+++++++| ++..++..+ |.++...|++++|+..++++++.+|+ +..+..+|.
T Consensus 83 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 162 (359)
T 3ieg_A 83 KQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRAE 162 (359)
T ss_dssp HHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 2344999999999999999 999999888 79999999999999999999999995 788889999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcC
Q 007721 394 LFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLIND 473 (591)
Q Consensus 394 ~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~ 473 (591)
++..+|++++|+..|+++++++|++. .+...++.+....+++++| +..++++++.+
T Consensus 163 ~~~~~~~~~~A~~~~~~~~~~~~~~~------~~~~~la~~~~~~~~~~~A------------------~~~~~~a~~~~ 218 (359)
T 3ieg_A 163 CFIKEGEPRKAISDLKAASKLKSDNT------EAFYKISTLYYQLGDHELS------------------LSEVRECLKLD 218 (359)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTCSCCH------HHHHHHHHHHHHHTCHHHH------------------HHHHHHHHHHC
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHcCCHHHH------------------HHHHHHHHhhC
Confidence 99999999999999999999999884 3344444444444455544 88999999999
Q ss_pred CCCchhHh------------hhHHHHHHhCCHHHHHHHHHHHHhcCCchH----HHHHhHHHHHHHcCCHHHHHHHHHHh
Q 007721 474 PGKSFLRF------------RQSLLLLRLNCQKAAMRCLRLARNHSSSEH----ERLVYEGWILYDTGHREEALSRAEKS 537 (591)
Q Consensus 474 P~~~~~~~------------~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~----~a~~~~G~~l~~~g~~eeAl~~~e~a 537 (591)
|.++.++. .+|.++.+.|++++|+..++++++..|+++ .++..+|.++..+|++++|+..|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 298 (359)
T 3ieg_A 219 QDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEV 298 (359)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 99999765 458899999999999999999999999987 45778999999999999999999999
Q ss_pred hcccccHH-HHHHHHHHhhhcCCCCCchhHHHHHHHHHhcC
Q 007721 538 ISIERTFE-AFFLKAYILADTNLDPESSTYVIQLLEEALRC 577 (591)
Q Consensus 538 i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (591)
++++|+.. +++..|.++...+ --..-+..++.|++.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~g----~~~~A~~~~~~a~~~ 335 (359)
T 3ieg_A 299 LQMEPDNVNALKDRAEAYLIEE----MYDEAIQDYEAAQEH 335 (359)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTT----CHHHHHHHHHHHHTT
T ss_pred HHhCcccHHHHHHHHHHHHHcC----CHHHHHHHHHHHHhc
Confidence 99999655 9999999887654 234556667777765
No 11
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.94 E-value=4.8e-25 Score=235.49 Aligned_cols=295 Identities=17% Similarity=0.067 Sum_probs=252.3
Q ss_pred HHHHHHHhhhHHhhhccHHHHHHHHHHHhhccc--cchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHh--
Q 007721 255 RMLALHQLGCVMFEREEYKDACYYFEAAADAGH--IYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSL-- 330 (591)
Q Consensus 255 ~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~--~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~-- 330 (591)
...++..+|..+...|++++|+..|+++++..+ ..++..+|.++...|++++|+..+.+++...|+...++...+.
T Consensus 25 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 104 (450)
T 2y4t_A 25 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLL 104 (450)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 456788999999999999999999999998854 4578889999999999999999999999999998888877754
Q ss_pred --cCCcHHHHHHHHHHHHcCCCCh---HHHHhH------------HHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHH
Q 007721 331 --YNLGREKIVDLNYASELDPTLS---FPYKYR------------AVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRA 392 (591)
Q Consensus 331 --y~~~~eA~~dl~~Ai~LdP~~~---~ay~~r------------g~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~ 392 (591)
.+..++|+..|+++++++|++. .++..+ |.++...|++++|+..|+++++++|+ +..+..+|
T Consensus 105 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~ 184 (450)
T 2y4t_A 105 LKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELRELRA 184 (450)
T ss_dssp HHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 2344999999999999999998 776655 77799999999999999999999995 78888999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHc
Q 007721 393 WLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLIN 472 (591)
Q Consensus 393 ~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~ 472 (591)
.++...|++++|+..|+++++++|++. .+...++.+.....++++ |+..+++++.+
T Consensus 185 ~~~~~~g~~~~A~~~~~~~~~~~~~~~------~~~~~l~~~~~~~g~~~~------------------A~~~~~~~~~~ 240 (450)
T 2y4t_A 185 ECFIKEGEPRKAISDLKAASKLKNDNT------EAFYKISTLYYQLGDHEL------------------SLSEVRECLKL 240 (450)
T ss_dssp HHHHHTTCGGGGHHHHHHHHHHHCSCH------HHHHHHHHHHHHTTCHHH------------------HHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHcCCHHH------------------HHHHHHHHHHh
Confidence 999999999999999999999999873 333334434444444444 48899999999
Q ss_pred CCCCchhHhhh------------HHHHHHhCCHHHHHHHHHHHHhcCCchH----HHHHhHHHHHHHcCCHHHHHHHHHH
Q 007721 473 DPGKSFLRFRQ------------SLLLLRLNCQKAAMRCLRLARNHSSSEH----ERLVYEGWILYDTGHREEALSRAEK 536 (591)
Q Consensus 473 ~P~~~~~~~~~------------g~~l~~l~~~~eA~~~~~~Al~l~p~~~----~a~~~~G~~l~~~g~~eeAl~~~e~ 536 (591)
+|.++..+... |.++...|++++|+..|++++++.|+++ .++.++|.++..+|++++|+..+++
T Consensus 241 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 320 (450)
T 2y4t_A 241 DQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSE 320 (450)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 99999998776 9999999999999999999999999984 4899999999999999999999999
Q ss_pred hhcccccHH-HHHHHHHHhhhcCCCCCchhHHHHHHHHHhcC
Q 007721 537 SISIERTFE-AFFLKAYILADTNLDPESSTYVIQLLEEALRC 577 (591)
Q Consensus 537 ai~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (591)
++++.|++. +++.+|.++.... --..-+..++.|++.
T Consensus 321 a~~~~p~~~~~~~~l~~~~~~~~----~~~~A~~~~~~al~~ 358 (450)
T 2y4t_A 321 VLQMEPDNVNALKDRAEAYLIEE----MYDEAIQDYETAQEH 358 (450)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTT----CHHHHHHHHHHHHTT
T ss_pred HHHhCcccHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHh
Confidence 999999755 9999999887653 233445556666654
No 12
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.94 E-value=3.1e-25 Score=246.03 Aligned_cols=294 Identities=12% Similarity=0.008 Sum_probs=253.5
Q ss_pred chhHHHHHHHHhhcchhhhHHHHHHHHhhhHHhhhccHHHHHHHHHHHhhccc--cchhhhhHHHHHHhCChHHHHHHHH
Q 007721 235 SNTTVMLLERLGECSTERWQRMLALHQLGCVMFEREEYKDACYYFEAAADAGH--IYSLAGLARAKYKVGQQYSAYKLIN 312 (591)
Q Consensus 235 ~~~~v~lLe~~~~~~~~~~~~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~--~~a~~~la~~~~~~G~~~~A~~~~~ 312 (591)
.+.+..+++++.+.+ .....+..+|..+...|++++|+..|+++++.++ ..++..++.++...|++++|...+.
T Consensus 288 ~~~A~~~~~~~~~~~----~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 363 (597)
T 2xpi_A 288 LRRAEDYLSSINGLE----KSSDLLLCKADTLFVRSRFIDVLAITTKILEIDPYNLDVYPLHLASLHESGEKNKLYLISN 363 (597)
T ss_dssp HHHHHHHHHTSTTGG----GCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCC----chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 445666776655543 2356788999999999999999999999998754 4577788999999999999999999
Q ss_pred HHHHhcCCCHHHHHHHHh----cCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHH
Q 007721 313 SIISEHKPTGWMYQERSL----YNLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDC 387 (591)
Q Consensus 313 ~aI~~~~~~g~a~~~r~~----y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~ 387 (591)
+++...|+...++...+. .+..++|+..|+++++++|++..+|..+|.++...|++++|+..|+++++..|+ ...
T Consensus 364 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~ 443 (597)
T 2xpi_A 364 DLVDRHPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLP 443 (597)
T ss_dssp HHHHHCTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHH
T ss_pred HHHhhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHH
Confidence 999999987777666643 234499999999999999999999999999999999999999999999999995 788
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHH
Q 007721 388 LELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVIN 467 (591)
Q Consensus 388 ~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~ 467 (591)
+..++.++...|++++|+..|+++++++|++. .+...++.+....+++++| +..++
T Consensus 444 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~------~~~~~l~~~~~~~g~~~~A------------------~~~~~ 499 (597)
T 2xpi_A 444 YLFLGMQHMQLGNILLANEYLQSSYALFQYDP------LLLNELGVVAFNKSDMQTA------------------INHFQ 499 (597)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCH------HHHHHHHHHHHHTTCHHHH------------------HHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh------HHHHHHHHHHHHhCCHHHH------------------HHHHH
Confidence 88899999999999999999999999999873 2333444444444444444 88999
Q ss_pred HHHHc------CCCC-chhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcc
Q 007721 468 QMLIN------DPGK-SFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISI 540 (591)
Q Consensus 468 ~al~~------~P~~-~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l 540 (591)
++++. +|.+ +.+|+.+|.++.++|++++|++.++++++++|+++.++..+|.++...|++++|+..|++++++
T Consensus 500 ~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~ 579 (597)
T 2xpi_A 500 NALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLAITHLHESLAI 579 (597)
T ss_dssp HHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 99998 6765 7899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHH-HHHHHHHHhhh
Q 007721 541 ERTFE-AFFLKAYILAD 556 (591)
Q Consensus 541 ~~~~~-~~~~~~~~~~~ 556 (591)
+|+.. ++++.|.+++.
T Consensus 580 ~p~~~~~~~~l~~~~~~ 596 (597)
T 2xpi_A 580 SPNEIMASDLLKRALEE 596 (597)
T ss_dssp CTTCHHHHHHHHHTTC-
T ss_pred CCCChHHHHHHHHHHhc
Confidence 99887 99999888765
No 13
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.94 E-value=3.9e-25 Score=238.21 Aligned_cols=318 Identities=11% Similarity=0.056 Sum_probs=241.7
Q ss_pred HHHHHHhhhhccccchhHHHHHHHHhhcchh------hhHHHHHHHHhhhHHhhhccHHHHHHHHHHHhhccc-------
Q 007721 221 YYFLSQVAMEKDRVSNTTVMLLERLGECSTE------RWQRMLALHQLGCVMFEREEYKDACYYFEAAADAGH------- 287 (591)
Q Consensus 221 ~a~Ls~v~~d~~~r~~~~v~lLe~~~~~~~~------~~~~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~------- 287 (591)
+-.++.+.+..+. .+.++..+++++++.+. .......+.++|.++...|++++|+.+|++++++.+
T Consensus 54 yn~Lg~~~~~~G~-~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~ 132 (472)
T 4g1t_A 54 CNLLAYLKHLKGQ-NEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYR 132 (472)
T ss_dssp HHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSC
T ss_pred HHHHHHHHHHCCC-HHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccc
Confidence 4567888776555 77788888886653211 223457899999999999999999999999988722
Q ss_pred ---cchhhhhHHHHHH--hCChHHHHHHHHHHHHhcCCCHHHHHHHH-------hcCCcHHHHHHHHHHHHcCCCChHHH
Q 007721 288 ---IYSLAGLARAKYK--VGQQYSAYKLINSIISEHKPTGWMYQERS-------LYNLGREKIVDLNYASELDPTLSFPY 355 (591)
Q Consensus 288 ---~~a~~~la~~~~~--~G~~~~A~~~~~~aI~~~~~~g~a~~~r~-------~y~~~~eA~~dl~~Ai~LdP~~~~ay 355 (591)
...+...|.++.. .+++++|+..|.++++..|+.+.++...+ .++..++|+..|++|++++|+++.++
T Consensus 133 ~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~ 212 (472)
T 4g1t_A 133 IESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLK 212 (472)
T ss_dssp CCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHH
T ss_pred hhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHH
Confidence 1234445555444 45689999999999999999887776654 23455789999999999999999999
Q ss_pred HhHHHHHHHh----CCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHH
Q 007721 356 KYRAVAKMEE----GQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHL 430 (591)
Q Consensus 356 ~~rg~~l~~l----~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~ 430 (591)
.++|..+..+ |++++|+..+++++.++|+ +..+.++|.++...|++++|+..|+++++++|++...+.+.+....
T Consensus 213 ~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~ 292 (472)
T 4g1t_A 213 VLLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYR 292 (472)
T ss_dssp HHHHHHHHHCC------CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHH
Confidence 9999887664 6788999999999999996 7888899999999999999999999999999998664443332221
Q ss_pred HHHHHhhhcccCchhhhhhhhhccccccccc-hHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCc
Q 007721 431 VKLLNHHVRSWSPADCWIKLYDRWSSVDDIG-SLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSS 509 (591)
Q Consensus 431 ~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~-al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~ 509 (591)
..... ..+..+............+. |+..+.++++++|.++.+++++|.++..+|++++|+..|++|++++|+
T Consensus 293 ~~~~~------~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~ 366 (472)
T 4g1t_A 293 AKVFQ------VMNLRENGMYGKRKLLELIGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELT 366 (472)
T ss_dssp HHHHH------HHHC------CHHHHHHHHHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC
T ss_pred HHHHH------hhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 11110 00100011111111112222 678999999999999999999999999999999999999999999998
Q ss_pred hHHH---HHhHHH-HHHHcCCHHHHHHHHHHhhcccccHH
Q 007721 510 EHER---LVYEGW-ILYDTGHREEALSRAEKSISIERTFE 545 (591)
Q Consensus 510 ~~~a---~~~~G~-~l~~~g~~eeAl~~~e~ai~l~~~~~ 545 (591)
+.+. +.+.|. .++.+|++++|+..|++|++++|...
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~~~~ 406 (472)
T 4g1t_A 367 PVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKSR 406 (472)
T ss_dssp HHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHSCCCCH
T ss_pred ChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCcccH
Confidence 7654 566775 45788999999999999999988754
No 14
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.94 E-value=1.2e-24 Score=237.63 Aligned_cols=258 Identities=14% Similarity=0.033 Sum_probs=193.4
Q ss_pred hhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhc----CCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHh
Q 007721 290 SLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLY----NLGREKIVDLNYASELDPTLSFPYKYRAVAKMEE 365 (591)
Q Consensus 290 a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y----~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l 365 (591)
++..+|..+...|+++.|...+.+++...|+ ..++...+.. +..++|+..|+++++++|+++.+|.++|.++..+
T Consensus 245 ~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 323 (537)
T 3fp2_A 245 ALCYTGIFHFLKNNLLDAQVLLQESINLHPT-PNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFIL 323 (537)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhc
Confidence 3556677788888888888888888888887 6677666542 2337888888888888888888888888888888
Q ss_pred CCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCch
Q 007721 366 GQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPA 444 (591)
Q Consensus 366 ~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a 444 (591)
|++++|+..|+++++++|+ +..+..+|.++..+|++++|+..|+++++++|++. .+...++.+....+++++|
T Consensus 324 ~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~------~~~~~l~~~~~~~g~~~~A 397 (537)
T 3fp2_A 324 QDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLP------EVPTFFAEILTDRGDFDTA 397 (537)
T ss_dssp TCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT------HHHHHHHHHHHHTTCHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh------HHHHHHHHHHHHhCCHHHH
Confidence 8888888888888888885 67777888888888888888888888888888773 2333334444444444444
Q ss_pred hhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhh------HHHHHHh----------CCHHHHHHHHHHHHhcCC
Q 007721 445 DCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQ------SLLLLRL----------NCQKAAMRCLRLARNHSS 508 (591)
Q Consensus 445 ~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~------g~~l~~l----------~~~~eA~~~~~~Al~l~p 508 (591)
+..++++++++|.++..+.+. |.++.++ |++++|+..++++++++|
T Consensus 398 ------------------~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p 459 (537)
T 3fp2_A 398 ------------------IKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACELDP 459 (537)
T ss_dssp ------------------HHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHHCT
T ss_pred ------------------HHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHhCC
Confidence 889999999999988876554 6888888 999999999999999999
Q ss_pred chHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHHHH------HHHHHHhhhcCCCCCchhHHHHHHH
Q 007721 509 SEHERLVYEGWILYDTGHREEALSRAEKSISIERTFEAF------FLKAYILADTNLDPESSTYVIQLLE 572 (591)
Q Consensus 509 ~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (591)
++++++.++|+++..+|++++|+..|++++++.|+.... ...+.+......||+-+..+.+++.
T Consensus 460 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (537)
T 3fp2_A 460 RSEQAKIGLAQLKLQMEKIDEAIELFEDSAILARTMDEKLQATTFAEAAKIQKRLRADPIISAKMELTLA 529 (537)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHTC------------
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHhHHHHHHHHHhccccHHHHHHHhhHHH
Confidence 999999999999999999999999999999999987622 1222233334567877777666554
No 15
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.94 E-value=2.2e-25 Score=231.31 Aligned_cols=271 Identities=13% Similarity=0.055 Sum_probs=223.4
Q ss_pred HHhhhccHHHHHH-HHHHHhhccc------cchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHh----cCC
Q 007721 265 VMFEREEYKDACY-YFEAAADAGH------IYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSL----YNL 333 (591)
Q Consensus 265 ~~~~~g~~~eA~~-~f~~Al~~~~------~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~----y~~ 333 (591)
.+.-.|+|++|+. .|++++.+.+ ..++..+|.++...|++.+|+..+.+++...|+.+.++..++. .+.
T Consensus 34 ~~~~~~~~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 113 (368)
T 1fch_A 34 AHPWLSDYDDLTSATYDKGYQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQ 113 (368)
T ss_dssp ------------CHHHHCCCCCCSSCTTTTCSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHhhhhhHHHhcCCCCcccchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcC
Confidence 4555689999999 9999988843 2357789999999999999999999999999998888877764 234
Q ss_pred cHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHH----------------HHHHHHH
Q 007721 334 GREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLE----------------LRAWLFI 396 (591)
Q Consensus 334 ~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~----------------~r~~~~~ 396 (591)
.++|+..|+++++++|+++.+|.++|.++..+|++++|+..++++++++|+ ...+. ..+.++
T Consensus 114 ~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 192 (368)
T 1fch_A 114 ELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLL- 192 (368)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHH-
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHh-
Confidence 489999999999999999999999999999999999999999999999996 44332 345555
Q ss_pred HcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCC
Q 007721 397 AADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGK 476 (591)
Q Consensus 397 ~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~ 476 (591)
..|++++|+..|+++++++|+.. ...+...++.+....+++++| +..+++++.++|.+
T Consensus 193 ~~~~~~~A~~~~~~a~~~~p~~~----~~~~~~~l~~~~~~~g~~~~A------------------~~~~~~al~~~~~~ 250 (368)
T 1fch_A 193 SDSLFLEVKELFLAAVRLDPTSI----DPDVQCGLGVLFNLSGEYDKA------------------VDCFTAALSVRPND 250 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSC----CHHHHHHHHHHHHHTTCHHHH------------------HHHHHHHHHHCTTC
T ss_pred hcccHHHHHHHHHHHHHhCcCcc----cHHHHHHHHHHHHHcCCHHHH------------------HHHHHHHHHhCcCC
Confidence 99999999999999999999831 123334444444444444444 88999999999999
Q ss_pred chhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccH------------
Q 007721 477 SFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTF------------ 544 (591)
Q Consensus 477 ~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~------------ 544 (591)
+.+++++|.++..+|++++|+..++++++++|+++.+++++|.++..+|++++|+..|++++++.|+.
T Consensus 251 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 330 (368)
T 1fch_A 251 YLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSE 330 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred HHHHHHHHHhhhcC
Q 007721 545 EAFFLKAYILADTN 558 (591)
Q Consensus 545 ~~~~~~~~~~~~~~ 558 (591)
.+++..|.++...+
T Consensus 331 ~~~~~l~~~~~~~g 344 (368)
T 1fch_A 331 NIWSTLRLALSMLG 344 (368)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhC
Confidence 58888888877654
No 16
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=5.9e-25 Score=238.01 Aligned_cols=327 Identities=15% Similarity=0.065 Sum_probs=268.2
Q ss_pred HHHHHHhhhhccccchhHHHHHHHHhhcchhhhHHHHHHHHhhhHHhhhccHHHHHHHHHHHhhcccc--chhhhhHHHH
Q 007721 221 YYFLSQVAMEKDRVSNTTVMLLERLGECSTERWQRMLALHQLGCVMFEREEYKDACYYFEAAADAGHI--YSLAGLARAK 298 (591)
Q Consensus 221 ~a~Ls~v~~d~~~r~~~~v~lLe~~~~~~~~~~~~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~~--~a~~~la~~~ 298 (591)
+..++...+.... .+.++..+++++...++ ..++..+|.++...|++++|+..|+++++.+|. .++..+|.++
T Consensus 9 ~~~~g~~~~~~g~-~~~A~~~~~~al~~~p~----~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 83 (514)
T 2gw1_A 9 LKDKGNQFFRNKK-YDDAIKYYNWALELKED----PVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRASAN 83 (514)
T ss_dssp HHHHHHHHHHTSC-HHHHHHHHHHHHHHCCC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc-HHHHHHHHHHHHhcCcc----HHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHHHHH
Confidence 3445555555444 77888999988776553 567899999999999999999999999998654 4788899999
Q ss_pred HHhCChHHHHHHHHHHHHhcCCC---------------------------------------------------------
Q 007721 299 YKVGQQYSAYKLINSIISEHKPT--------------------------------------------------------- 321 (591)
Q Consensus 299 ~~~G~~~~A~~~~~~aI~~~~~~--------------------------------------------------------- 321 (591)
..+|++++|+..+.+++...|..
T Consensus 84 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (514)
T 2gw1_A 84 EGLGKFADAMFDLSVLSLNGDFNDASIEPMLERNLNKQAMSKLKEKFGDIDTATATPTELSTQPAKERKDKQENLPSVTS 163 (514)
T ss_dssp HHTTCHHHHHHHHHHHHHSSSCCGGGTHHHHHHHHHHHHHHHHTTC---------------------------CCCCHHH
T ss_pred HHHhhHHHHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCChhhHHHhhccCCchhHH
Confidence 99999999999999998877521
Q ss_pred ----------------------HHHHHHHHh-------cCCcHHHHHHHHHHHH-----c--C-------CCChHHHHhH
Q 007721 322 ----------------------GWMYQERSL-------YNLGREKIVDLNYASE-----L--D-------PTLSFPYKYR 358 (591)
Q Consensus 322 ----------------------g~a~~~r~~-------y~~~~eA~~dl~~Ai~-----L--d-------P~~~~ay~~r 358 (591)
+.++..++. .+..++|+..|+++++ + + |..+.+|..+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (514)
T 2gw1_A 164 MASFFGIFKPELTFANYDESNEADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHT 243 (514)
T ss_dssp HHHHHTTSCCCCCCSSCCSSCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCHHHHHHHhcCCcHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHH
Confidence 444444433 1223899999999999 7 3 5667899999
Q ss_pred HHHHHHhCCHHHHHHHHHHHHhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhh
Q 007721 359 AVAKMEEGQIRAAISEIDRIIVFKLSVDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHV 438 (591)
Q Consensus 359 g~~l~~l~~~~eAl~~~~~al~l~p~~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~ 438 (591)
|.++...|++++|+..|+++++.+|+...+..+|.++...|++++|+..|+++++++|++. .+...++.+....
T Consensus 244 ~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~------~~~~~l~~~~~~~ 317 (514)
T 2gw1_A 244 GIFKFLKNDPLGAHEDIKKAIELFPRVNSYIYMALIMADRNDSTEYYNYFDKALKLDSNNS------SVYYHRGQMNFIL 317 (514)
T ss_dssp HHHHHHSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCTTCT------HHHHHHHHHHHHT
T ss_pred HHHHHHCCCHHHHHHHHHHHHhhCccHHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCcCCH------HHHHHHHHHHHHh
Confidence 9999999999999999999999999966677899999999999999999999999999873 3444444444455
Q ss_pred cccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHH
Q 007721 439 RSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEG 518 (591)
Q Consensus 439 ~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G 518 (591)
+++++| +..++++++++|.++.+++++|.++..+|++++|+..+++++++.|+++++++++|
T Consensus 318 ~~~~~A------------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 379 (514)
T 2gw1_A 318 QNYDQA------------------GKDFDKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFA 379 (514)
T ss_dssp TCTTHH------------------HHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHH
T ss_pred CCHHHH------------------HHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHH
Confidence 555555 88999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHhhcccccHH-------HHHHHHHHhhhcCCCCCchhHHHHHHHHHhcC
Q 007721 519 WILYDTGHREEALSRAEKSISIERTFE-------AFFLKAYILADTNLDPESSTYVIQLLEEALRC 577 (591)
Q Consensus 519 ~~l~~~g~~eeAl~~~e~ai~l~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (591)
.++..+|++++|+..|++++.+.|+.. +++..|.++.... +-..-..-+..++.+++-
T Consensus 380 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~A~~~~~~a~~~ 444 (514)
T 2gw1_A 380 EILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNP-TVENFIEATNLLEKASKL 444 (514)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSC-CTTHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhh-hcCCHHHHHHHHHHHHHh
Confidence 999999999999999999999988864 8999999887710 012233455666666553
No 17
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.3e-24 Score=233.35 Aligned_cols=274 Identities=15% Similarity=0.019 Sum_probs=238.1
Q ss_pred HHHHHHhhhHHhh---hccHHHHHHHHHHHhh-----c-----------cccchhhhhHHHHHHhCChHHHHHHHHHHHH
Q 007721 256 MLALHQLGCVMFE---REEYKDACYYFEAAAD-----A-----------GHIYSLAGLARAKYKVGQQYSAYKLINSIIS 316 (591)
Q Consensus 256 ~~a~~~lG~~~~~---~g~~~eA~~~f~~Al~-----~-----------~~~~a~~~la~~~~~~G~~~~A~~~~~~aI~ 316 (591)
..++..+|..... .|++++|+..|+++++ + ....++..+|.++...|++++|+..+.+++.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~ 265 (514)
T 2gw1_A 186 ADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFLKNDPLGAHEDIKKAIE 265 (514)
T ss_dssp HHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 4456777877776 8999999999999998 4 2234677889999999999999999999999
Q ss_pred hcCCCHHHHHHHHhc----CCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHH
Q 007721 317 EHKPTGWMYQERSLY----NLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELR 391 (591)
Q Consensus 317 ~~~~~g~a~~~r~~y----~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r 391 (591)
..|. ..++...+.. +..++|+..|+++++++|+++.+|..+|.++...|++++|+..|+++++++|+ +..+..+
T Consensus 266 ~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 344 (514)
T 2gw1_A 266 LFPR-VNSYIYMALIMADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQL 344 (514)
T ss_dssp HCCC-HHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCTTCTHHHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSHHHHHH
T ss_pred hCcc-HHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhHHHHHHH
Confidence 9998 8887777642 34489999999999999999999999999999999999999999999999996 7888889
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHH
Q 007721 392 AWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLI 471 (591)
Q Consensus 392 ~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~ 471 (591)
|.++...|++++|+..|+++++++|++. .+...++.+....+++++| +..+++++.
T Consensus 345 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~------~~~~~la~~~~~~~~~~~A------------------~~~~~~a~~ 400 (514)
T 2gw1_A 345 ACLAYRENKFDDCETLFSEAKRKFPEAP------EVPNFFAEILTDKNDFDKA------------------LKQYDLAIE 400 (514)
T ss_dssp HHHTTTTTCHHHHHHHHHHHHHHSTTCS------HHHHHHHHHHHHTTCHHHH------------------HHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHcccCH------HHHHHHHHHHHHCCCHHHH------------------HHHHHHHHH
Confidence 9999999999999999999999999873 3344444444444444444 889999999
Q ss_pred cCCCCch------hHhhhHHHHHH---hCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccc
Q 007721 472 NDPGKSF------LRFRQSLLLLR---LNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIER 542 (591)
Q Consensus 472 ~~P~~~~------~~~~~g~~l~~---l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~ 542 (591)
++|.++. +++++|.++.. +|++++|+..++++++++|+++.++..+|.++..+|++++|+..|++++++.|
T Consensus 401 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 480 (514)
T 2gw1_A 401 LENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLAR 480 (514)
T ss_dssp HHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS
T ss_pred hhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcc
Confidence 9999976 99999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred cHH-HHHHHHHHh
Q 007721 543 TFE-AFFLKAYIL 554 (591)
Q Consensus 543 ~~~-~~~~~~~~~ 554 (591)
++. +.....+..
T Consensus 481 ~~~~~~~~~~~~~ 493 (514)
T 2gw1_A 481 TMEEKLQAITFAE 493 (514)
T ss_dssp SHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHH
Confidence 988 554444433
No 18
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.93 E-value=7.8e-24 Score=234.72 Aligned_cols=289 Identities=9% Similarity=-0.034 Sum_probs=246.0
Q ss_pred HHhhhHHhhhccHHHHHHHHHHHhhc-cccchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHH----hcCCc
Q 007721 260 HQLGCVMFEREEYKDACYYFEAAADA-GHIYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERS----LYNLG 334 (591)
Q Consensus 260 ~~lG~~~~~~g~~~eA~~~f~~Al~~-~~~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~----~y~~~ 334 (591)
..++..+..+|++++|+..|+++++. +...++..++.++...|++++|...+.+++...|+...++...+ ..+..
T Consensus 276 ~~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 355 (597)
T 2xpi_A 276 MLKLNKTSHEDELRRAEDYLSSINGLEKSSDLLLCKADTLFVRSRFIDVLAITTKILEIDPYNLDVYPLHLASLHESGEK 355 (597)
T ss_dssp HTTSCTTTTHHHHHHHHHHHHTSTTGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHTCH
T ss_pred HHHHHHHcCcchHHHHHHHHHHhhcCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHhCCH
Confidence 33477788899999999999998887 34557888999999999999999999999998886544333332 12344
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLA 413 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~ 413 (591)
++|+..|+++++.+|+++.+|..+|.++...|++++|+..|+++++++|+ ...+..++.++...|++++|+..|+++++
T Consensus 356 ~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~ 435 (597)
T 2xpi_A 356 NKLYLISNDLVDRHPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAAR 435 (597)
T ss_dssp HHHHHHHHHHHHHCTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999996 78889999999999999999999999999
Q ss_pred cCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCH
Q 007721 414 LESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQ 493 (591)
Q Consensus 414 l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~ 493 (591)
++|++. .+...++.+....+++++| +..++++++.+|.++.+|+.+|.++.+.|++
T Consensus 436 ~~~~~~------~~~~~l~~~~~~~g~~~~A------------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 491 (597)
T 2xpi_A 436 LFQGTH------LPYLFLGMQHMQLGNILLA------------------NEYLQSSYALFQYDPLLLNELGVVAFNKSDM 491 (597)
T ss_dssp TTTTCS------HHHHHHHHHHHHHTCHHHH------------------HHHHHHHHHHCCCCHHHHHHHHHHHHHTTCH
T ss_pred hCccch------HHHHHHHHHHHHcCCHHHH------------------HHHHHHHHHhCCCChHHHHHHHHHHHHhCCH
Confidence 999873 2333343333444444444 8899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc------CCch-HHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH-HHHHHHHHhhhcCCCCCchh
Q 007721 494 KAAMRCLRLARNH------SSSE-HERLVYEGWILYDTGHREEALSRAEKSISIERTFE-AFFLKAYILADTNLDPESST 565 (591)
Q Consensus 494 ~eA~~~~~~Al~l------~p~~-~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~-~~~~~~~~~~~~~~~~~~~~ 565 (591)
++|+..+++++++ +|++ +.++.++|+++...|++++|+..|++++++.|+.. +++..|.++...+ --.
T Consensus 492 ~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g----~~~ 567 (597)
T 2xpi_A 492 QTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKK----IPG 567 (597)
T ss_dssp HHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTT----CHH
T ss_pred HHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhC----CHH
Confidence 9999999999999 7776 89999999999999999999999999999999655 9999999988765 234
Q ss_pred HHHHHHHHHhc
Q 007721 566 YVIQLLEEALR 576 (591)
Q Consensus 566 ~~~~~~~~~~~ 576 (591)
..++.++++++
T Consensus 568 ~A~~~~~~~l~ 578 (597)
T 2xpi_A 568 LAITHLHESLA 578 (597)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 55666777664
No 19
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.93 E-value=2.2e-24 Score=235.40 Aligned_cols=296 Identities=10% Similarity=0.035 Sum_probs=241.9
Q ss_pred HHHHHHhhhhccccchhHHHHHHHHhhcchhhhHHHHHHHHhhhHHhhhccHHHHHHHHHHHhhccc--cchhhhhHHHH
Q 007721 221 YYFLSQVAMEKDRVSNTTVMLLERLGECSTERWQRMLALHQLGCVMFEREEYKDACYYFEAAADAGH--IYSLAGLARAK 298 (591)
Q Consensus 221 ~a~Ls~v~~d~~~r~~~~v~lLe~~~~~~~~~~~~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~--~~a~~~la~~~ 298 (591)
+..++........ .+.++..++++++..|+. ..++.++|.++...|++++|+..|+++++++| ..++..+|.++
T Consensus 28 ~~~~g~~~~~~g~-~~~A~~~~~~al~~~p~~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 103 (537)
T 3fp2_A 28 LKNRGNHFFTAKN-FNEAIKYYQYAIELDPNE---PVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRASAN 103 (537)
T ss_dssp HHHHHHHHHHTTC-CC-CHHHHHHHHHHCTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc-HHHHHHHHHHHHhhCCCC---cHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 4555666665444 778889999988766553 57889999999999999999999999999865 45788899999
Q ss_pred HHhCChHHHHHHHHHHHHhcCCCHHHH-----------------------------------------------------
Q 007721 299 YKVGQQYSAYKLINSIISEHKPTGWMY----------------------------------------------------- 325 (591)
Q Consensus 299 ~~~G~~~~A~~~~~~aI~~~~~~g~a~----------------------------------------------------- 325 (591)
...|++++|+..+. ++...|+....+
T Consensus 104 ~~~g~~~~A~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (537)
T 3fp2_A 104 ESLGNFTDAMFDLS-VLSLNGDFDGASIEPMLERNLNKQAMKVLNENLSKDEGRGSQVLPSNTSLASFFGIFDSHLEVSS 182 (537)
T ss_dssp HHHTCHHHHHHHHH-HHC-----------CHHHHHHHHHHHHHHHHHCC-------CCCCCHHHHHHHHHTSCHHHHHHT
T ss_pred HHcCCHHHHHHHHH-HHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCccccccccchHhHHHHHHHhcChHHHHHH
Confidence 99999999999985 665554322111
Q ss_pred ---------------HHHHh-c-----------CCcHHHHHHHHHHHHcCCCChH-------HHHhHHHHHHHhCCHHHH
Q 007721 326 ---------------QERSL-Y-----------NLGREKIVDLNYASELDPTLSF-------PYKYRAVAKMEEGQIRAA 371 (591)
Q Consensus 326 ---------------~~r~~-y-----------~~~~eA~~dl~~Ai~LdP~~~~-------ay~~rg~~l~~l~~~~eA 371 (591)
..... + +..++|+..|+++++.+|++.. +|..+|.++...|++++|
T Consensus 183 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A 262 (537)
T 3fp2_A 183 VNTSSNYDTAYALLSDALQRLYSATDEGYLVANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDA 262 (537)
T ss_dssp SCCCCSSCSSHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HhhccccccHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHH
Confidence 00000 0 1227899999999999999855 688889999999999999
Q ss_pred HHHHHHHHhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhh
Q 007721 372 ISEIDRIIVFKLSVDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLY 451 (591)
Q Consensus 372 l~~~~~al~l~p~~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~ 451 (591)
+..|+++++++|++..+..+|.++...|++++|+..|+++++++|++. .+...++.+....+++++|
T Consensus 263 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~------~~~~~l~~~~~~~~~~~~A------- 329 (537)
T 3fp2_A 263 QVLLQESINLHPTPNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYP------PTYYHRGQMYFILQDYKNA------- 329 (537)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCH------HHHHHHHHHHHHTTCHHHH-------
T ss_pred HHHHHHHHhcCCCchHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCH------HHHHHHHHHHHhcCCHHHH-------
Confidence 999999999999988888899999999999999999999999999873 3344444444445555555
Q ss_pred hccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHH
Q 007721 452 DRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEAL 531 (591)
Q Consensus 452 ~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl 531 (591)
+..++++++++|.++.+++++|.++..+|++++|+..++++++++|++++++.++|.++..+|++++|+
T Consensus 330 -----------~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 398 (537)
T 3fp2_A 330 -----------KEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAI 398 (537)
T ss_dssp -----------HHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHH
T ss_pred -----------HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHH
Confidence 889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccccHH
Q 007721 532 SRAEKSISIERTFE 545 (591)
Q Consensus 532 ~~~e~ai~l~~~~~ 545 (591)
..|++++++.|+..
T Consensus 399 ~~~~~a~~~~~~~~ 412 (537)
T 3fp2_A 399 KQYDIAKRLEEVQE 412 (537)
T ss_dssp HHHHHHHHHHHHCS
T ss_pred HHHHHHHHcCCcch
Confidence 99999999988754
No 20
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.93 E-value=2.4e-25 Score=231.93 Aligned_cols=234 Identities=15% Similarity=0.065 Sum_probs=186.5
Q ss_pred HHHHhhhHHhhhccHHHHHHHHHHHhhccc--cchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcCCcH
Q 007721 258 ALHQLGCVMFEREEYKDACYYFEAAADAGH--IYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLYNLGR 335 (591)
Q Consensus 258 a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~--~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~~~~ 335 (591)
.++.+|..+...|++++|+..|++++...+ ..++..+|.++..+|++ +
T Consensus 67 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~------------------------------~ 116 (365)
T 4eqf_A 67 GAFEEGLKRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENE------------------------------Q 116 (365)
T ss_dssp THHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH------------------------------H
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCH------------------------------H
Confidence 456666677777777777777777666643 23445555555555544 7
Q ss_pred HHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHH----------HHHHHHcCCHHHH
Q 007721 336 EKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELR----------AWLFIAADDYESA 404 (591)
Q Consensus 336 eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r----------~~~~~~~g~~~~A 404 (591)
+|+..|+++++++|+++.+|.++|.++..+|++++|+..|+++++++|+ ...+..+ |.++..+|++++|
T Consensus 117 ~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 196 (365)
T 4eqf_A 117 AAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGV 196 (365)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHH
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHH
Confidence 7888889999999999999999999999999999999999999999996 4444444 7899999999999
Q ss_pred HHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhH
Q 007721 405 LRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQS 484 (591)
Q Consensus 405 ~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g 484 (591)
+..|+++++++|+.. ...+...++.+....+++++| +..++++++++|.++.+|+++|
T Consensus 197 ~~~~~~al~~~p~~~----~~~~~~~l~~~~~~~g~~~~A------------------~~~~~~al~~~p~~~~~~~~l~ 254 (365)
T 4eqf_A 197 KELYLEAAHQNGDMI----DPDLQTGLGVLFHLSGEFNRA------------------IDAFNAALTVRPEDYSLWNRLG 254 (365)
T ss_dssp HHHHHHHHHHSCSSC----CHHHHHHHHHHHHHHTCHHHH------------------HHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHhCcCcc----CHHHHHHHHHHHHHCCCHHHH------------------HHHHHHHHHhCCCCHHHHHHHH
Confidence 999999999999831 122344444444444555555 8899999999999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhccccc
Q 007721 485 LLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERT 543 (591)
Q Consensus 485 ~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~ 543 (591)
.++..+|++++|+..|+++++++|+++.+++++|.++..+|++++|+..|++|+++.|+
T Consensus 255 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 313 (365)
T 4eqf_A 255 ATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRK 313 (365)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc
Confidence 99999999999999999999999999999999999999999999999999999999987
No 21
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.93 E-value=7.6e-25 Score=227.27 Aligned_cols=279 Identities=13% Similarity=0.038 Sum_probs=236.5
Q ss_pred hHHH-HHHHHhhcchhhh-HHHHHHHHhhhHHhhhccHHHHHHHHHHHhhccc--cchhhhhHHHHHHhCChHHHHHHHH
Q 007721 237 TTVM-LLERLGECSTERW-QRMLALHQLGCVMFEREEYKDACYYFEAAADAGH--IYSLAGLARAKYKVGQQYSAYKLIN 312 (591)
Q Consensus 237 ~~v~-lLe~~~~~~~~~~-~~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~--~~a~~~la~~~~~~G~~~~A~~~~~ 312 (591)
.+.. .+++++...+... .....++.+|..+...|++++|+..|+++++..+ ..++..+|.++...|++++|+..+.
T Consensus 43 ~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 122 (368)
T 1fch_A 43 DLTSATYDKGYQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALR 122 (368)
T ss_dssp ---CHHHHCCCCCCSSCTTTTCSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHhhhhhHHHhcCCCCcccchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHHHHHHHHH
Confidence 3444 5555444433321 1234578899999999999999999999999854 4578889999999999999999999
Q ss_pred HHHHhcCCCHHHHHHHHh----cCCcHHHHHHHHHHHHcCCCChHHHH----------------hHHHHHHHhCCHHHHH
Q 007721 313 SIISEHKPTGWMYQERSL----YNLGREKIVDLNYASELDPTLSFPYK----------------YRAVAKMEEGQIRAAI 372 (591)
Q Consensus 313 ~aI~~~~~~g~a~~~r~~----y~~~~eA~~dl~~Ai~LdP~~~~ay~----------------~rg~~l~~l~~~~eAl 372 (591)
+++...|+.+.++...+. .+..++|+..|+++++++|++..++. .+|.++ ..|++++|+
T Consensus 123 ~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~ 201 (368)
T 1fch_A 123 RCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLL-SDSLFLEVK 201 (368)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHH-HHHHHHHHH
T ss_pred HHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHh-hcccHHHHH
Confidence 999999998888877764 23448999999999999999998887 567776 999999999
Q ss_pred HHHHHHHhcCCC---hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhh
Q 007721 373 SEIDRIIVFKLS---VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIK 449 (591)
Q Consensus 373 ~~~~~al~l~p~---~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~ 449 (591)
..|+++++++|+ +..+..+|.++...|++++|+..|+++++++|++. .+...++.+....+++++|
T Consensus 202 ~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~------~~~~~l~~~~~~~g~~~~A----- 270 (368)
T 1fch_A 202 ELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDY------LLWNKLGATLANGNQSEEA----- 270 (368)
T ss_dssp HHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH------HHHHHHHHHHHHTTCHHHH-----
T ss_pred HHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCH------HHHHHHHHHHHHcCCHHHH-----
Confidence 999999999997 56778899999999999999999999999999873 3444444444445555555
Q ss_pred hhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCch-----------HHHHHhHH
Q 007721 450 LYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSE-----------HERLVYEG 518 (591)
Q Consensus 450 l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~-----------~~a~~~~G 518 (591)
+..++++++++|.++.+++++|.++.++|++++|+..+++++++.|++ +.++.++|
T Consensus 271 -------------~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~ 337 (368)
T 1fch_A 271 -------------VAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLR 337 (368)
T ss_dssp -------------HHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHH
T ss_pred -------------HHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHH
Confidence 889999999999999999999999999999999999999999999998 89999999
Q ss_pred HHHHHcCCHHHHHHHHHHhhcc
Q 007721 519 WILYDTGHREEALSRAEKSISI 540 (591)
Q Consensus 519 ~~l~~~g~~eeAl~~~e~ai~l 540 (591)
.++..+|++++|...+++++++
T Consensus 338 ~~~~~~g~~~~A~~~~~~~l~~ 359 (368)
T 1fch_A 338 LALSMLGQSDAYGAADARDLST 359 (368)
T ss_dssp HHHHHHTCGGGHHHHHTTCHHH
T ss_pred HHHHHhCChHhHHHhHHHHHHH
Confidence 9999999999999999998875
No 22
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.93 E-value=8.7e-25 Score=232.14 Aligned_cols=245 Identities=11% Similarity=0.042 Sum_probs=211.2
Q ss_pred HHHHHHHhhhHHhhhccHHHHHHHHHHHhhccc--cchhhhhHHHHHHhCC-hHHHHHHHHHHHHhcCCCHHHHHHHHh-
Q 007721 255 RMLALHQLGCVMFEREEYKDACYYFEAAADAGH--IYSLAGLARAKYKVGQ-QYSAYKLINSIISEHKPTGWMYQERSL- 330 (591)
Q Consensus 255 ~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~--~~a~~~la~~~~~~G~-~~~A~~~~~~aI~~~~~~g~a~~~r~~- 330 (591)
...+++++|.++...|++++|+..|++||+++| ..++.++|.++..+|+ +++|+..+.++|..+|+...+|.++|.
T Consensus 96 ~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~ 175 (382)
T 2h6f_A 96 FRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVL 175 (382)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 456789999999999999999999999999965 4578899999999997 999999999999999999999988875
Q ss_pred ---cCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHH-cCCHHHH-
Q 007721 331 ---YNLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIA-ADDYESA- 404 (591)
Q Consensus 331 ---y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~-~g~~~~A- 404 (591)
.+..++|+..|++|++++|+++.+|.+||.++..+|++++|+..|+++|+++|+ +.+|++||.++.. .|.+++|
T Consensus 176 ~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~~~eA~ 255 (382)
T 2h6f_A 176 VEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRAV 255 (382)
T ss_dssp HHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSCSHHH
T ss_pred HHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcchHHH
Confidence 345599999999999999999999999999999999999999999999999995 8999999999999 5555888
Q ss_pred ----HHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhc--ccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCch
Q 007721 405 ----LRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVR--SWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSF 478 (591)
Q Consensus 405 ----~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~--~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~ 478 (591)
+..|++|++++|++.. +...++.+..... ++++ ++..+.++ +.+|.++.
T Consensus 256 ~~~el~~~~~Al~l~P~~~~------a~~~l~~ll~~~g~~~~~~------------------a~~~~~~~-~~~p~~~~ 310 (382)
T 2h6f_A 256 LEREVQYTLEMIKLVPHNES------AWNYLKGILQDRGLSKYPN------------------LLNQLLDL-QPSHSSPY 310 (382)
T ss_dssp HHHHHHHHHHHHHHSTTCHH------HHHHHHHHHTTTCGGGCHH------------------HHHHHHHH-TTTCCCHH
T ss_pred HHHHHHHHHHHHHHCCCCHH------HHHHHHHHHHccCccchHH------------------HHHHHHHh-ccCCCCHH
Confidence 5999999999999842 3333222222211 1222 47777777 99999999
Q ss_pred hHhhhHHHHHHhC---------CHHHHHHHHHHH-HhcCCchHHHHHhHHHHHHHc
Q 007721 479 LRFRQSLLLLRLN---------CQKAAMRCLRLA-RNHSSSEHERLVYEGWILYDT 524 (591)
Q Consensus 479 ~~~~~g~~l~~l~---------~~~eA~~~~~~A-l~l~p~~~~a~~~~G~~l~~~ 524 (591)
++..+|.++.++| ..++|+..|+++ ++++|.....+.++|..+..+
T Consensus 311 al~~La~~~~~~~~~~~~~~~~~~~~A~~~~~~l~~~~DP~r~~~w~~~~~~l~~~ 366 (382)
T 2h6f_A 311 LIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIGRSLQSK 366 (382)
T ss_dssp HHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHH
Confidence 9999999999985 358999999999 999999999999999988765
No 23
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.93 E-value=8.3e-26 Score=233.50 Aligned_cols=144 Identities=19% Similarity=0.257 Sum_probs=126.8
Q ss_pred ccCCCCCCceEEEEcCeEEEhhHHHHhhcCHHHHHhhcCCCCCCCCceeEecCCCCCHHHHHHHHHHHhcCCCCCCChhH
Q 007721 48 CLSLEEDDSVTFCVRDKEISFVRNKIASLSSPFKAMLYGGFVESKRKTIDFSHDGVSVEGLRAVEVYTRTSRVDLFCPGI 127 (591)
Q Consensus 48 ~~~~~~~~~V~f~v~g~~~~aHr~iLaa~S~yF~amf~~~~~Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~~~~~~~~~ 127 (591)
...+...+||+|.|+|++|+|||.||+++|+||++||.++|.|+...+|+| +++++++|+.+|+|+|||++. ++.++
T Consensus 168 l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l--~~~~~~~f~~~L~~iYt~~~~-~~~~~ 244 (312)
T 3hqi_A 168 LWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEI--NDVEPEVFKEMMCFIYTGKAP-NLDKM 244 (312)
T ss_dssp HHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEE--CSSCHHHHHHHHHHHHHSCCT-THHHH
T ss_pred HHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEe--cCCCHHHHHHHHHhhcCCCCC-ChHHH
Confidence 335567778999999999999999999999999999999999999999999 999999999999999999999 88899
Q ss_pred HHHHHHHHhhhChHHHHHHHHHHHHhhcCCHHhHHHHHHHHHHhChHHHHHHHHHHHHhhhHhhhCCc
Q 007721 128 VLELLSFANRFCCEEMKSACDAHLASLVGDIEDALILIDYGLEERATLLVASCLQVLLRELPSSLYNP 195 (591)
Q Consensus 128 v~~lL~~A~~~~i~~L~~~C~~~L~~~i~~~~n~~~ll~~A~~~~~~~L~~~c~~~i~~n~~~v~~~~ 195 (591)
+.+||.+|++|+++.|+..|+++|.+.++ .+||+.++.+|..|++..|++.|++||..||.++++++
T Consensus 245 ~~~ll~~A~~~~~~~l~~~c~~~l~~~~~-~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v~~s~ 311 (312)
T 3hqi_A 245 ADDLLAAADKYALERLKVMCEDALCSNLS-VENAAEILILADLHSADQLKTQAVDFINYHATDVLETS 311 (312)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCC-TTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-------
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHccCC-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999999999999 89999999999999999999999999999999998775
No 24
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.93 E-value=6.2e-25 Score=214.03 Aligned_cols=179 Identities=15% Similarity=0.077 Sum_probs=136.9
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHc-----------CCHH
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAA-----------DDYE 402 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~-----------g~~~ 402 (591)
++|+..|+++++++|+++.+|.++|.++..+|++++|+..|+++++++|+ +..+.++|.++..+ |+++
T Consensus 22 ~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~ 101 (217)
T 2pl2_A 22 DAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLE 101 (217)
T ss_dssp HHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHH
Confidence 77777888888888888888888888888888888888888888888885 67778888888888 8888
Q ss_pred HHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhh
Q 007721 403 SALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFR 482 (591)
Q Consensus 403 ~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~ 482 (591)
+|+..|+++++++|++. .+...++.+....+++++| +..++++++++ .++.++++
T Consensus 102 ~A~~~~~~al~~~P~~~------~~~~~lg~~~~~~g~~~~A------------------~~~~~~al~~~-~~~~~~~~ 156 (217)
T 2pl2_A 102 QALSVLKDAERVNPRYA------PLHLQRGLVYALLGERDKA------------------EASLKQALALE-DTPEIRSA 156 (217)
T ss_dssp HHHHHHHHHHHHCTTCH------HHHHHHHHHHHHTTCHHHH------------------HHHHHHHHHHC-CCHHHHHH
T ss_pred HHHHHHHHHHHhCcccH------HHHHHHHHHHHHcCChHHH------------------HHHHHHHHhcc-cchHHHHH
Confidence 88888888888888873 3334444444444444444 77888888888 88899999
Q ss_pred hHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhh
Q 007721 483 QSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSI 538 (591)
Q Consensus 483 ~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai 538 (591)
+|.++..+|++++|+..|+++++++|++++++.++|.++..+|++++|+..|+++.
T Consensus 157 la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~~ 212 (217)
T 2pl2_A 157 LAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALLLKGKAEEAARAAALEH 212 (217)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTC---------------
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHccCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999998864
No 25
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.93 E-value=2.1e-24 Score=219.30 Aligned_cols=263 Identities=11% Similarity=-0.011 Sum_probs=219.7
Q ss_pred HHHHHhhhHHhhhccHHHHHHHHHHHhhccc--cchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHh----
Q 007721 257 LALHQLGCVMFEREEYKDACYYFEAAADAGH--IYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSL---- 330 (591)
Q Consensus 257 ~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~--~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~---- 330 (591)
..++.+|..+...|++++|+..|+++++..+ ..++..+|.++...|++++|...+.+++...|+...++...+.
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 101 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 101 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHH
Confidence 4567888899999999999999999988854 4467788889999999999999999999999888777766653
Q ss_pred cCCcHHHHHHHHHHHHcCCCChHHHHhH--------------HH-HHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHH
Q 007721 331 YNLGREKIVDLNYASELDPTLSFPYKYR--------------AV-AKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWL 394 (591)
Q Consensus 331 y~~~~eA~~dl~~Ai~LdP~~~~ay~~r--------------g~-~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~ 394 (591)
.+..++|+..|+++++.+|+....+..+ |. ++...|++++|+..++++++.+|+ +..+..+|.+
T Consensus 102 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 181 (327)
T 3cv0_A 102 EHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPNDAQLHASLGVL 181 (327)
T ss_dssp TTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Confidence 2334889999999999999999988888 77 788899999999999999999995 7778889999
Q ss_pred HHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCC
Q 007721 395 FIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDP 474 (591)
Q Consensus 395 ~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P 474 (591)
+...|++++|+..|+++++++|++. .+...++.+....+++++| +..++++++.+|
T Consensus 182 ~~~~~~~~~A~~~~~~~~~~~~~~~------~~~~~l~~~~~~~~~~~~A------------------~~~~~~a~~~~~ 237 (327)
T 3cv0_A 182 YNLSNNYDSAAANLRRAVELRPDDA------QLWNKLGATLANGNRPQEA------------------LDAYNRALDINP 237 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCH------HHHHHHHHHHHHTTCHHHH------------------HHHHHHHHHHCT
T ss_pred HHHhccHHHHHHHHHHHHHhCCCcH------HHHHHHHHHHHHcCCHHHH------------------HHHHHHHHHcCC
Confidence 9999999999999999999999873 2333444444444444444 888999999999
Q ss_pred CCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCc------------hHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccc
Q 007721 475 GKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSS------------EHERLVYEGWILYDTGHREEALSRAEKSISIER 542 (591)
Q Consensus 475 ~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~------------~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~ 542 (591)
.++.+++++|.++..+|++++|+..+++++++.|+ ++.++.++|.++..+|++++|...+++++++-|
T Consensus 238 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~~ 317 (327)
T 3cv0_A 238 GYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVELTYAQNVEPFA 317 (327)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHHHHTTCCSHHHH
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999 899999999999999999999999999998766
Q ss_pred c
Q 007721 543 T 543 (591)
Q Consensus 543 ~ 543 (591)
+
T Consensus 318 ~ 318 (327)
T 3cv0_A 318 K 318 (327)
T ss_dssp H
T ss_pred h
Confidence 4
No 26
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.92 E-value=1.2e-23 Score=226.60 Aligned_cols=267 Identities=13% Similarity=0.007 Sum_probs=218.3
Q ss_pred HHHHHHHhhhHHhhhccHHHHHHHHHHHhhcc--------c---cchhhhhHHHHHHhCChHHHHHHHHHHHHhc-----
Q 007721 255 RMLALHQLGCVMFEREEYKDACYYFEAAADAG--------H---IYSLAGLARAKYKVGQQYSAYKLINSIISEH----- 318 (591)
Q Consensus 255 ~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~--------~---~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~----- 318 (591)
++..++++|.++...|++++|+++|++|+++. + ..++.++|.++..+|++++|...+.+++.+.
T Consensus 50 ~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~ 129 (472)
T 4g1t_A 50 KATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSS 129 (472)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhccc
Confidence 34568889999999999999999999999861 1 1246789999999999999999999998763
Q ss_pred ---CCCHHHHHHHHh----cCC--cHHHHHHHHHHHHcCCCChHHHHhHHHHHHH---hCCHHHHHHHHHHHHhcCCC-h
Q 007721 319 ---KPTGWMYQERSL----YNL--GREKIVDLNYASELDPTLSFPYKYRAVAKME---EGQIRAAISEIDRIIVFKLS-V 385 (591)
Q Consensus 319 ---~~~g~a~~~r~~----y~~--~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~---l~~~~eAl~~~~~al~l~p~-~ 385 (591)
+..+.++.+.|. .+. .++|+..|++|++++|+++.++.++|.++.. .++.++|+..|++|++++|+ +
T Consensus 130 ~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~ 209 (472)
T 4g1t_A 130 PYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQ 209 (472)
T ss_dssp SSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCH
T ss_pred ccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcch
Confidence 345566655542 122 2899999999999999999999999998654 57889999999999999996 6
Q ss_pred HHHHHHHHHHH----HcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccc
Q 007721 386 DCLELRAWLFI----AADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIG 461 (591)
Q Consensus 386 ~~~~~r~~~~~----~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~ 461 (591)
..+.++|..+. ..|++++|+..|+++++++|++. .+...++.+.....++++|
T Consensus 210 ~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~------~~~~~lg~~~~~~~~~~~A----------------- 266 (472)
T 4g1t_A 210 YLKVLLALKLHKMREEGEEEGEGEKLVEEALEKAPGVT------DVLRSAAKFYRRKDEPDKA----------------- 266 (472)
T ss_dssp HHHHHHHHHHHHCC------CHHHHHHHHHHHHCSSCH------HHHHHHHHHHHHTTCHHHH-----------------
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhCccHH------HHHHHHHHHHHHcCchHHH-----------------
Confidence 77777776544 45788999999999999999983 3344444444445555555
Q ss_pred hHHHHHHHHHcCCCCchhHhhhHHHHHH-------------------hCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHH
Q 007721 462 SLAVINQMLINDPGKSFLRFRQSLLLLR-------------------LNCQKAAMRCLRLARNHSSSEHERLVYEGWILY 522 (591)
Q Consensus 462 al~~~~~al~~~P~~~~~~~~~g~~l~~-------------------l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~ 522 (591)
+..+.++++.+|.++.+++++|.++.. .+.+++|+..+++|++++|+++.++.++|.++.
T Consensus 267 -~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~ 345 (472)
T 4g1t_A 267 -IELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKADEANDNLFRVCSILASLHA 345 (472)
T ss_dssp -HHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHHCTTTCCCHHHHHHHHH
T ss_pred -HHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhcCCchhhhhhhHHHHHH
Confidence 889999999999999999999998754 345788999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHhhcccccHH
Q 007721 523 DTGHREEALSRAEKSISIERTFE 545 (591)
Q Consensus 523 ~~g~~eeAl~~~e~ai~l~~~~~ 545 (591)
.+|++++|+..|++|++++|+..
T Consensus 346 ~~~~~~~A~~~~~kaL~~~~~~~ 368 (472)
T 4g1t_A 346 LADQYEEAEYYFQKEFSKELTPV 368 (472)
T ss_dssp HTTCHHHHHHHHHHHHHSCCCHH
T ss_pred HhccHHHHHHHHHHHHhcCCCCh
Confidence 99999999999999999988765
No 27
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.92 E-value=2.5e-23 Score=211.49 Aligned_cols=275 Identities=11% Similarity=-0.011 Sum_probs=231.0
Q ss_pred cchhHHHHHHHHhhcchhhhHHHHHHHHhhhHHhhhccHHHHHHHHHHHhhccc--cchhhhhHHHHHHhC-ChHHHHHH
Q 007721 234 VSNTTVMLLERLGECSTERWQRMLALHQLGCVMFEREEYKDACYYFEAAADAGH--IYSLAGLARAKYKVG-QQYSAYKL 310 (591)
Q Consensus 234 r~~~~v~lLe~~~~~~~~~~~~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~--~~a~~~la~~~~~~G-~~~~A~~~ 310 (591)
+.+.+..+++++++..+.. ..++..++.++...|++++|+..++++++..+ ..++..+|.++...| +++.|+..
T Consensus 37 ~~~~A~~~~~~~l~~~p~~---~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~ 113 (330)
T 3hym_B 37 DFKMCYKLTSVVMEKDPFH---ASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRY 113 (330)
T ss_dssp CHHHHHHHHHHHHHHCTTC---TTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHSCSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCC---hhhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 3777888888877655543 34566788888999999999999999999854 457888999999999 99999999
Q ss_pred HHHHHHhcCCCHHHHHHHHh----cCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-h
Q 007721 311 INSIISEHKPTGWMYQERSL----YNLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-V 385 (591)
Q Consensus 311 ~~~aI~~~~~~g~a~~~r~~----y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~ 385 (591)
+.+++...|+.+.++...+. .+..++|+..|+++++++|+...++.++|.++...|++++|+..++++++++|+ +
T Consensus 114 ~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~ 193 (330)
T 3hym_B 114 LSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDP 193 (330)
T ss_dssp HHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred HHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCh
Confidence 99999999988777776653 234499999999999999999999999999999999999999999999999996 7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhh---hhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccch
Q 007721 386 DCLELRAWLFIAADDYESALRDTLALLALESNYMMF---HGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGS 462 (591)
Q Consensus 386 ~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~---~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~a 462 (591)
..+..+|.++..+|++++|+..|++++++.|....- .....+...++.+....+++++|
T Consensus 194 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A------------------ 255 (330)
T 3hym_B 194 FVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEA------------------ 255 (330)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHH------------------
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHH------------------
Confidence 888899999999999999999999999998543211 01123444444444444444444
Q ss_pred HHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHH-HHcCCHHH
Q 007721 463 LAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWIL-YDTGHREE 529 (591)
Q Consensus 463 l~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l-~~~g~~ee 529 (591)
+..++++++++|.++.+++++|.++..+|++++|+..++++++++|+++.++..+|+++ ..+|+.+.
T Consensus 256 ~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~g~~~a 323 (330)
T 3hym_B 256 LDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGDSEA 323 (330)
T ss_dssp HHHHHHHHHHSTTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHHHHHHHHHHTTTTC---
T ss_pred HHHHHHHHhhCccchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHhCchhc
Confidence 88999999999999999999999999999999999999999999999999999999999 67777653
No 28
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.92 E-value=3.6e-24 Score=208.62 Aligned_cols=185 Identities=17% Similarity=0.075 Sum_probs=163.9
Q ss_pred CCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchH
Q 007721 349 PTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSG 427 (591)
Q Consensus 349 P~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~ 427 (591)
|.++.+|.++|.++...|++++|+..|+++|+++|+ +..+.++|.++..+|++++|+..|+++++++|++.. +
T Consensus 2 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~------a 75 (217)
T 2pl2_A 2 QTAEQNPLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLG------G 75 (217)
T ss_dssp --CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH------H
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH------H
Confidence 889999999999999999999999999999999996 888999999999999999999999999999999854 3
Q ss_pred hHHHHHHHhhh-----------cccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHH
Q 007721 428 DHLVKLLNHHV-----------RSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAA 496 (591)
Q Consensus 428 ~~~~~~l~~~~-----------~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA 496 (591)
...++.+.... +++++ |+..++++++++|+++.+|+++|.++..+|++++|
T Consensus 76 ~~~lg~~~~~~~~~~~~~~~~~g~~~~------------------A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A 137 (217)
T 2pl2_A 76 YMVLSEAYVALYRQAEDRERGKGYLEQ------------------ALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKA 137 (217)
T ss_dssp HHHHHHHHHHHHHTCSSHHHHHHHHHH------------------HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHhhhhhhhhcccccCHHH------------------HHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHH
Confidence 33333333333 33333 58899999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH-HHHHHHHHhhhcC
Q 007721 497 MRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFE-AFFLKAYILADTN 558 (591)
Q Consensus 497 ~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~-~~~~~~~~~~~~~ 558 (591)
+..|++|++++ +++++++++|.++..+|++++|+..|+++++++|++. +++..|.++....
T Consensus 138 ~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~la~~~~~~g 199 (217)
T 2pl2_A 138 EASLKQALALE-DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALLLKG 199 (217)
T ss_dssp HHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTC--
T ss_pred HHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcc
Confidence 99999999999 9999999999999999999999999999999999988 8899998887654
No 29
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.3e-23 Score=205.95 Aligned_cols=227 Identities=14% Similarity=0.105 Sum_probs=189.0
Q ss_pred HHHHHHHhhhHHhhhccHHHHHHHHHHHhhcc-ccchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcCC
Q 007721 255 RMLALHQLGCVMFEREEYKDACYYFEAAADAG-HIYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLYNL 333 (591)
Q Consensus 255 ~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~-~~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~~ 333 (591)
.+.++..+|..+...|++++|+..|+++++.. ...++..+|.++...|++++|+.
T Consensus 4 ~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~------------------------ 59 (258)
T 3uq3_A 4 MADKEKAEGNKFYKARQFDEAIEHYNKAWELHKDITYLNNRAAAEYEKGEYETAIS------------------------ 59 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCCTHHHHHHHHHHHHTTCHHHHHH------------------------
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhccHHHHHHHHHHHHHcccHHHHHH------------------------
Confidence 35678889999999999999999999998875 33466677777777777755544
Q ss_pred cHHHHHHHHHHHHcCCCC-------hHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCChHHHHHHHHHHHHcCCHHHHHH
Q 007721 334 GREKIVDLNYASELDPTL-------SFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLSVDCLELRAWLFIAADDYESALR 406 (591)
Q Consensus 334 ~~eA~~dl~~Ai~LdP~~-------~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~~~~~~~r~~~~~~~g~~~~A~~ 406 (591)
.|+++++++|++ +.+|.++|.++..+|++++|+..|+++++++|+. .++..+|++++|+.
T Consensus 60 ------~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-------~~~~~~~~~~~a~~ 126 (258)
T 3uq3_A 60 ------TLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTA-------DILTKLRNAEKELK 126 (258)
T ss_dssp ------HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH-------HHHHHHHHHHHHHH
T ss_pred ------HHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchh-------HHHHHHhHHHHHHH
Confidence 455555555554 6889999999999999999999999999999874 35667788999999
Q ss_pred HHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHH
Q 007721 407 DTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLL 486 (591)
Q Consensus 407 d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~ 486 (591)
.++++++++|++. .+...++.+....+++++| +..++++++.+|.++.+++++|.+
T Consensus 127 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~A------------------~~~~~~a~~~~~~~~~~~~~l~~~ 182 (258)
T 3uq3_A 127 KAEAEAYVNPEKA------EEARLEGKEYFTKSDWPNA------------------VKAYTEMIKRAPEDARGYSNRAAA 182 (258)
T ss_dssp HHHHHHHCCHHHH------HHHHHHHHHHHHTTCHHHH------------------HHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHcCcchH------HHHHHHHHHHHHhcCHHHH------------------HHHHHHHHhcCcccHHHHHHHHHH
Confidence 9999999999863 3344444444444555555 889999999999999999999999
Q ss_pred HHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccc
Q 007721 487 LLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIER 542 (591)
Q Consensus 487 l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~ 542 (591)
+..+|++++|+..++++++++|++++++.++|.++..+|++++|+..|++++++.|
T Consensus 183 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 238 (258)
T 3uq3_A 183 LAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDA 238 (258)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCh
Confidence 99999999999999999999999999999999999999999999999999999994
No 30
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.92 E-value=8.7e-24 Score=198.60 Aligned_cols=174 Identities=11% Similarity=0.103 Sum_probs=153.9
Q ss_pred CChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHh
Q 007721 350 TLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGD 428 (591)
Q Consensus 350 ~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~ 428 (591)
+.+..|+++|.++..+|++++|+..|+++|+++|+ +.++..+|.++..+|++++|+..+++++..+|++. .+.
T Consensus 3 e~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~------~~~ 76 (184)
T 3vtx_A 3 ETTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSA------EAY 76 (184)
T ss_dssp -CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCH------HHH
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhH------HHH
Confidence 56788999999999999999999999999999995 78888999999999999999999999999999873 333
Q ss_pred HHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCC
Q 007721 429 HLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSS 508 (591)
Q Consensus 429 ~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p 508 (591)
...+.+.....+++.| ...+.+++.++|.++.+++.+|.++.++|++++|+..|+++++++|
T Consensus 77 ~~~~~~~~~~~~~~~a------------------~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p 138 (184)
T 3vtx_A 77 YILGSANFMIDEKQAA------------------IDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKP 138 (184)
T ss_dssp HHHHHHHHHTTCHHHH------------------HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHcCCHHHH------------------HHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcc
Confidence 4444444444444444 7789999999999999999999999999999999999999999999
Q ss_pred chHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHHHH
Q 007721 509 SEHERLVYEGWILYDTGHREEALSRAEKSISIERTFEAF 547 (591)
Q Consensus 509 ~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~~~ 547 (591)
+++++++++|.++..+|++++|+..|++|++++|+.+-|
T Consensus 139 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~a~~ 177 (184)
T 3vtx_A 139 GFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKKAKY 177 (184)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHHHHHH
T ss_pred hhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCccCHHH
Confidence 999999999999999999999999999999999998654
No 31
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.91 E-value=1.6e-25 Score=204.71 Aligned_cols=128 Identities=20% Similarity=0.274 Sum_probs=95.6
Q ss_pred cccCCCCCCceEEEEcCeEEEhhHHHHhhcCHHHHHhhcCCCCCCCCceeEecCCCCCHHHHHHHHHHHhcCCCCCCChh
Q 007721 47 VCLSLEEDDSVTFCVRDKEISFVRNKIASLSSPFKAMLYGGFVESKRKTIDFSHDGVSVEGLRAVEVYTRTSRVDLFCPG 126 (591)
Q Consensus 47 ~~~~~~~~~~V~f~v~g~~~~aHr~iLaa~S~yF~amf~~~~~Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~~~~~~~~ 126 (591)
+..+++..+||+|.|+|+.|+|||.||+++|+||++||+++|.|+...+|++ +++++++|+.+|+|+|||++. ++.+
T Consensus 18 ~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l--~~~~~~~~~~~l~~~Y~~~~~-~~~~ 94 (145)
T 4eoz_A 18 GLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEI--NDVEPEVFKEMMCFIYTGKAP-NLDK 94 (145)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEE--CSSCHHHHHHHHHHHHHSCCT-TGGG
T ss_pred HHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEe--cCCCHHHHHHHHHhhccCccC-CcHH
Confidence 3345566778999999999999999999999999999999999998899999 999999999999999999999 9999
Q ss_pred HHHHHHHHHhhhChHHHHHHHHHHHHhhcCCHHhHHHHHHHHHHhChHHHHH
Q 007721 127 IVLELLSFANRFCCEEMKSACDAHLASLVGDIEDALILIDYGLEERATLLVA 178 (591)
Q Consensus 127 ~v~~lL~~A~~~~i~~L~~~C~~~L~~~i~~~~n~~~ll~~A~~~~~~~L~~ 178 (591)
++.+++.+|++|+++.|+..|+++|.+.++ ++||+.++.+|..|+++.|++
T Consensus 95 ~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~-~~n~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 95 MADDLLAAADKYALERLKVMCEDALCSNLS-VENAAEILILADLHSADQLKT 145 (145)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHCC----------------------------
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHhCHHHhcC
Confidence 999999999999999999999999999999 899999999999999998864
No 32
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.91 E-value=6.1e-23 Score=203.91 Aligned_cols=236 Identities=12% Similarity=0.046 Sum_probs=179.6
Q ss_pred HHHHhhhHHhhhccHHHHHHHHHHHhhccc--cchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcCCcH
Q 007721 258 ALHQLGCVMFEREEYKDACYYFEAAADAGH--IYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLYNLGR 335 (591)
Q Consensus 258 a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~--~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~~~~ 335 (591)
.++..|..+...|++++|+..|+++++..+ ..++..+|.++...|++++|+..+.+++. .++
T Consensus 5 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~--------------- 68 (272)
T 3u4t_A 5 VEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFS-KVN--------------- 68 (272)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSC---------------
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccC---------------
Confidence 456788888888999999999999888854 34677788888888887666555555444 111
Q ss_pred HHHHHHHHHHHcCCC-ChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 007721 336 EKIVDLNYASELDPT-LSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLA 413 (591)
Q Consensus 336 eA~~dl~~Ai~LdP~-~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~ 413 (591)
+|. .+.+|.++|.++..+|++++|+..|+++++++|+ +..+..+|.++..+|++++|+..|+++++
T Consensus 69 ------------~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 136 (272)
T 3u4t_A 69 ------------ATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIR 136 (272)
T ss_dssp ------------TTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCC
T ss_pred ------------chhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhh
Confidence 111 2445888888888888888888888888888885 67778888888888888888888888888
Q ss_pred cCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCC-
Q 007721 414 LESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNC- 492 (591)
Q Consensus 414 l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~- 492 (591)
++|++...+ ..++.......++++ |+..++++++++|.++.+++++|.++..+|+
T Consensus 137 ~~~~~~~~~------~~l~~~~~~~~~~~~------------------A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~ 192 (272)
T 3u4t_A 137 PTTTDPKVF------YELGQAYYYNKEYVK------------------ADSSFVKVLELKPNIYIGYLWRARANAAQDPD 192 (272)
T ss_dssp SSCCCHHHH------HHHHHHHHHTTCHHH------------------HHHHHHHHHHHSTTCHHHHHHHHHHHHHHSTT
T ss_pred cCCCcHHHH------HHHHHHHHHHHHHHH------------------HHHHHHHHHHhCccchHHHHHHHHHHHHcCcc
Confidence 888874322 222201111113333 4778888888888888999999999999998
Q ss_pred --HHHHHHHHHHHHhcC---Cc-----hHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH
Q 007721 493 --QKAAMRCLRLARNHS---SS-----EHERLVYEGWILYDTGHREEALSRAEKSISIERTFE 545 (591)
Q Consensus 493 --~~eA~~~~~~Al~l~---p~-----~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~ 545 (591)
+++|+..+++++++. |+ ..+++.++|.++..+|++++|+..|+++++++|+.+
T Consensus 193 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~ 255 (272)
T 3u4t_A 193 TKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRDKVKADAAWKNILALDPTNK 255 (272)
T ss_dssp CSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCccHH
Confidence 888999999999887 55 237888999999999999999999999999999877
No 33
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.91 E-value=9.8e-23 Score=206.87 Aligned_cols=246 Identities=14% Similarity=0.065 Sum_probs=211.8
Q ss_pred chhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHh----cCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHH
Q 007721 289 YSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSL----YNLGREKIVDLNYASELDPTLSFPYKYRAVAKME 364 (591)
Q Consensus 289 ~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~----y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~ 364 (591)
..+...|..+...|++++|+..+.+++...|+...++...+. .+..++|+..|+++++++|+++.+|..+|.++..
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 101 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 101 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHH
Confidence 356678899999999999999999999999998887777653 2344899999999999999999999999999999
Q ss_pred hCCHHHHHHHHHHHHhcCCC-hHHHHHH--------------HH-HHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHh
Q 007721 365 EGQIRAAISEIDRIIVFKLS-VDCLELR--------------AW-LFIAADDYESALRDTLALLALESNYMMFHGRVSGD 428 (591)
Q Consensus 365 l~~~~eAl~~~~~al~l~p~-~~~~~~r--------------~~-~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~ 428 (591)
.|++++|+..++++++.+|+ ...+..+ +. ++...|++++|+..|+++++++|++. .+.
T Consensus 102 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~------~~~ 175 (327)
T 3cv0_A 102 EHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPNDA------QLH 175 (327)
T ss_dssp TTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHSTTCH------HHH
T ss_pred cCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCCCCH------HHH
Confidence 99999999999999999996 4545444 55 68899999999999999999999863 334
Q ss_pred HHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCC
Q 007721 429 HLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSS 508 (591)
Q Consensus 429 ~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p 508 (591)
..++.+....+++++| +..++++++.+|.++.+++++|.++..+|++++|+..++++++++|
T Consensus 176 ~~la~~~~~~~~~~~A------------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 237 (327)
T 3cv0_A 176 ASLGVLYNLSNNYDSA------------------AANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINP 237 (327)
T ss_dssp HHHHHHHHHTTCHHHH------------------HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhccHHHH------------------HHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 4444444444444444 8899999999999999999999999999999999999999999999
Q ss_pred chHHHHHhHHHHHHHcCCHHHHHHHHHHhhccccc------------HH-HHHHHHHHhhhcC
Q 007721 509 SEHERLVYEGWILYDTGHREEALSRAEKSISIERT------------FE-AFFLKAYILADTN 558 (591)
Q Consensus 509 ~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~------------~~-~~~~~~~~~~~~~ 558 (591)
++.++++++|.+++.+|++++|+..|++++++.|+ .. +++..|.++...+
T Consensus 238 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 300 (327)
T 3cv0_A 238 GYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMN 300 (327)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999 44 8889998887654
No 34
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.91 E-value=5.4e-23 Score=214.10 Aligned_cols=223 Identities=12% Similarity=0.067 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLA 413 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~ 413 (591)
++|+..|+++++++|+++.+|.++|.++..+|++++|+..|+++++++|+ +..+..+|.++..+|++++|+..|+++++
T Consensus 82 ~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 161 (365)
T 4eqf_A 82 PVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDACEALKNWIK 161 (365)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHHHHHHHHHHHHH
Confidence 77788888999999999999999999999999999999999999999996 78889999999999999999999999999
Q ss_pred cCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccc-hHHHHHHHHHcCCC--CchhHhhhHHHHHHh
Q 007721 414 LESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIG-SLAVINQMLINDPG--KSFLRFRQSLLLLRL 490 (591)
Q Consensus 414 l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~-al~~~~~al~~~P~--~~~~~~~~g~~l~~l 490 (591)
++|++........ ..+..+..++..+...+++. |+..++++++++|. ++.+++++|.++..+
T Consensus 162 ~~p~~~~~~~~~~---------------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~ 226 (365)
T 4eqf_A 162 QNPKYKYLVKNKK---------------GSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLS 226 (365)
T ss_dssp HCHHHHCC----------------------------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHH
T ss_pred hCccchHHHhhhc---------------cchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHC
Confidence 9998754222110 00111122233333334444 68899999999999 999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH-HHHHHHHHhhhcCCCCCchhHHHH
Q 007721 491 NCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFE-AFFLKAYILADTNLDPESSTYVIQ 569 (591)
Q Consensus 491 ~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 569 (591)
|++++|+..++++++++|+++.++.++|.++..+|++++|+..|++++++.|+.. +++..|.++...+- -...+.
T Consensus 227 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~----~~~A~~ 302 (365)
T 4eqf_A 227 GEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGA----YREAVS 302 (365)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC----CHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCC----HHHHHH
Confidence 9999999999999999999999999999999999999999999999999999966 99999998887653 234556
Q ss_pred HHHHHhc
Q 007721 570 LLEEALR 576 (591)
Q Consensus 570 ~~~~~~~ 576 (591)
.++.|++
T Consensus 303 ~~~~al~ 309 (365)
T 4eqf_A 303 NFLTALS 309 (365)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666664
No 35
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.90 E-value=7.8e-23 Score=208.86 Aligned_cols=249 Identities=14% Similarity=0.090 Sum_probs=202.2
Q ss_pred HhhhccHHHHHHHHHHHhhcccc---chhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhc----CCcHHHH
Q 007721 266 MFEREEYKDACYYFEAAADAGHI---YSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLY----NLGREKI 338 (591)
Q Consensus 266 ~~~~g~~~eA~~~f~~Al~~~~~---~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y----~~~~eA~ 338 (591)
.+..|+|++|+...++.....+. .+...+++++..+|+++.|+..+... .++...++...+.+ +..++|+
T Consensus 9 ~~~~g~y~~ai~~~~~~~~~~p~~~~e~~~~l~r~yi~~g~~~~al~~~~~~---~~~~~~a~~~la~~~~~~~~~~~A~ 85 (291)
T 3mkr_A 9 AFYIGSYQQCINEAQRVKPSSPERDVERDVFLYRAYLAQRKYGVVLDEIKPS---SAPELQAVRMFAEYLASHSRRDAIV 85 (291)
T ss_dssp HHHTTCHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCHHHHHHHSCTT---SCHHHHHHHHHHHHHHCSTTHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHCCCHHHHHHHhccc---CChhHHHHHHHHHHHcCCCcHHHHH
Confidence 45578899999988876665443 35567789999999999888776542 34333444333322 2238899
Q ss_pred HHHHHHHHc--CCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Q 007721 339 VDLNYASEL--DPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKL-SVDCLELRAWLFIAADDYESALRDTLALLALE 415 (591)
Q Consensus 339 ~dl~~Ai~L--dP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p-~~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~ 415 (591)
..+++++.. +|+++.++..+|.++...|++++|+..+++ | +++.+..+|.++..+|++++|+..|+++++++
T Consensus 86 ~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~-----~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~ 160 (291)
T 3mkr_A 86 AELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ-----GDSLECMAMTVQILLKLDRLDLARKELKKMQDQD 160 (291)
T ss_dssp HHHHHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT-----CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC-----CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhC
Confidence 999998875 699999999999999999999999999998 6 57888899999999999999999999999999
Q ss_pred CcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccc-hHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHH
Q 007721 416 SNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIG-SLAVINQMLINDPGKSFLRFRQSLLLLRLNCQK 494 (591)
Q Consensus 416 P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~-al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~ 494 (591)
|++... .+ +.+|..++.. .+++. |+..|+++++.+|.++.+++++|.++.++|+++
T Consensus 161 p~~~~~-------~l-------------~~a~~~l~~~---~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~ 217 (291)
T 3mkr_A 161 EDATLT-------QL-------------ATAWVSLAAG---GEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWE 217 (291)
T ss_dssp TTCHHH-------HH-------------HHHHHHHHHC---TTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHH
T ss_pred cCcHHH-------HH-------------HHHHHHHHhC---chHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHH
Confidence 987311 00 1223333221 13333 588999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHH-HHHHHHhhcccccHH
Q 007721 495 AAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEA-LSRAEKSISIERTFE 545 (591)
Q Consensus 495 eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeA-l~~~e~ai~l~~~~~ 545 (591)
+|+..+++|++++|+++++++++|.++..+|+.+++ .+.++++++++|+..
T Consensus 218 eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~ 269 (291)
T 3mkr_A 218 AAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHP 269 (291)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999999999999999999999875 578899999999987
No 36
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.89 E-value=4.9e-23 Score=235.27 Aligned_cols=175 Identities=13% Similarity=0.010 Sum_probs=157.1
Q ss_pred cCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhc
Q 007721 347 LDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRV 425 (591)
Q Consensus 347 LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~ 425 (591)
-.|+++.+|.++|.++.++|++++|+..|++||+++|+ ..+++++|.++..+|++++|+..|++|++++|++.
T Consensus 4 s~P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~------ 77 (723)
T 4gyw_A 4 SCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFA------ 77 (723)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH------
T ss_pred CCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH------
Confidence 46999999999999999999999999999999999996 78889999999999999999999999999999983
Q ss_pred hHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHh
Q 007721 426 SGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARN 505 (591)
Q Consensus 426 ~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~ 505 (591)
.+...++.+....+++++| +..|+++|+++|+++++|+++|.++..+|++++|+..|++|++
T Consensus 78 ~a~~nLg~~l~~~g~~~~A------------------~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~ 139 (723)
T 4gyw_A 78 DAYSNMGNTLKEMQDVQGA------------------LQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALK 139 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHH------------------HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHH------------------HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3444455555555555555 8899999999999999999999999999999999999999999
Q ss_pred cCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH
Q 007721 506 HSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFE 545 (591)
Q Consensus 506 l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~ 545 (591)
++|++++++.++|.++..+|++++|.+.|++++++.|+..
T Consensus 140 l~P~~~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~~~~ 179 (723)
T 4gyw_A 140 LKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQL 179 (723)
T ss_dssp HCSCCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHHH
T ss_pred hCCCChHHHhhhhhHHHhcccHHHHHHHHHHHHHhChhHH
Confidence 9999999999999999999999999999999999988753
No 37
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.89 E-value=7.4e-23 Score=177.84 Aligned_cols=102 Identities=25% Similarity=0.325 Sum_probs=90.8
Q ss_pred CCCCCCceEEEEcC----eEEEhhHHHHhhcCHHHHHhhcCCCCCCCCceeEecCCCCCHHHHHHHHHHHhcCCCCCCCh
Q 007721 50 SLEEDDSVTFCVRD----KEISFVRNKIASLSSPFKAMLYGGFVESKRKTIDFSHDGVSVEGLRAVEVYTRTSRVDLFCP 125 (591)
Q Consensus 50 ~~~~~~~V~f~v~g----~~~~aHr~iLaa~S~yF~amf~~~~~Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~~~~~~~ 125 (591)
+++..+||+|+|+| +.|+|||.||+++|+||++||+++|.|+. .+|++ +++++++|+.+|+|+|||++. ++.
T Consensus 4 ~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l--~~~~~~~f~~~l~~iYt~~~~-~~~ 79 (109)
T 2vkp_A 4 NNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHI--PDVEPAAFLILLKYMYSDEID-LEA 79 (109)
T ss_dssp TCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEE--TTSCHHHHHHHHHHHHHCCCC-CCT
T ss_pred cCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEe--CCCCHHHHHHHHHHHcCCCcc-CCH
Confidence 45667789999998 89999999999999999999999999998 99999 999999999999999999999 999
Q ss_pred hHHHHHHHHHhhhChHHHHHHHHHHHHhhc
Q 007721 126 GIVLELLSFANRFCCEEMKSACDAHLASLV 155 (591)
Q Consensus 126 ~~v~~lL~~A~~~~i~~L~~~C~~~L~~~i 155 (591)
+++.+++.+|++|+++.|++.|++||.+.+
T Consensus 80 ~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 80 DTVLATLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 999999999999999999999999998764
No 38
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.89 E-value=3.7e-22 Score=210.65 Aligned_cols=292 Identities=10% Similarity=0.005 Sum_probs=235.4
Q ss_pred HHHHHHHHhhhHHhhhccHHHHHHHHHHHhhcccc------chhhhhHHHHHHhCChHHHHHHHHHHHHh------cCCC
Q 007721 254 QRMLALHQLGCVMFEREEYKDACYYFEAAADAGHI------YSLAGLARAKYKVGQQYSAYKLINSIISE------HKPT 321 (591)
Q Consensus 254 ~~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~~------~a~~~la~~~~~~G~~~~A~~~~~~aI~~------~~~~ 321 (591)
.....++.+|..+...|++++|+..|++++++.+. .++..+|.++...|++++|+..+.+++.. .+..
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 125 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGE 125 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHH
Confidence 34567788999999999999999999999998543 36778999999999999999999999887 3444
Q ss_pred HHHHHHHHh----cCCcHHHHHHHHHHHHc------CCCChHHHHhHHHHHHHhCC-----------------HHHHHHH
Q 007721 322 GWMYQERSL----YNLGREKIVDLNYASEL------DPTLSFPYKYRAVAKMEEGQ-----------------IRAAISE 374 (591)
Q Consensus 322 g~a~~~r~~----y~~~~eA~~dl~~Ai~L------dP~~~~ay~~rg~~l~~l~~-----------------~~eAl~~ 374 (591)
+.++...+. .+..++|+..|++++++ .|..+.+|.++|.++..+|+ +++|+..
T Consensus 126 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~ 205 (411)
T 4a1s_A 126 AKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEF 205 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHH
Confidence 455555443 13339999999999999 78888999999999999999 9999999
Q ss_pred HHHHHhcCC---C----hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhh
Q 007721 375 IDRIIVFKL---S----VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCW 447 (591)
Q Consensus 375 ~~~al~l~p---~----~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~ 447 (591)
+++++++.+ + ...+.++|.++..+|++++|+..|++++++.|+.........+...++.+.....++++|
T Consensus 206 ~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A--- 282 (411)
T 4a1s_A 206 YQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDA--- 282 (411)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHH---
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHH---
Confidence 999998743 1 245677899999999999999999999999987533222333444444444444444444
Q ss_pred hhhhhccccccccchHHHHHHHHHcCCCC------chhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCch------HHHHH
Q 007721 448 IKLYDRWSSVDDIGSLAVINQMLINDPGK------SFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSE------HERLV 515 (591)
Q Consensus 448 ~~l~~~~~~~~~~~al~~~~~al~~~P~~------~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~------~~a~~ 515 (591)
+..+++++++.|.. +.++.++|.++..+|++++|+..+++++++.++. +.++.
T Consensus 283 ---------------~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 347 (411)
T 4a1s_A 283 ---------------AEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACW 347 (411)
T ss_dssp ---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred ---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHH
Confidence 88899999998865 7889999999999999999999999999997665 55999
Q ss_pred hHHHHHHHcCCHHHHHHHHHHhhcccccHHHHHHHHHHhhhcCCCCCc
Q 007721 516 YEGWILYDTGHREEALSRAEKSISIERTFEAFFLKAYILADTNLDPES 563 (591)
Q Consensus 516 ~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~~~~~~~~~~~~~~~~~~~ 563 (591)
.+|.++..+|++++|+..|++|+++.+....-...+-...+++.+.+.
T Consensus 348 ~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (411)
T 4a1s_A 348 SLGNAHSAIGGHERALKYAEQHLQLAXXXXXXXXXXXXXXXXXXXXXX 395 (411)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHTC------
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHhhcccchhhhhhhhhhhhhhhh
Confidence 999999999999999999999999999988766676666665544433
No 39
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.88 E-value=1.3e-20 Score=188.47 Aligned_cols=232 Identities=15% Similarity=0.092 Sum_probs=186.5
Q ss_pred HHHHHHhhhHHhhhccHHHHHHHHHHHhhccccchhhhhHHHHHH----hCChHHHHHHHHHHHHhcCCCHHHHHHHHhc
Q 007721 256 MLALHQLGCVMFEREEYKDACYYFEAAADAGHIYSLAGLARAKYK----VGQQYSAYKLINSIISEHKPTGWMYQERSLY 331 (591)
Q Consensus 256 ~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~~~a~~~la~~~~~----~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y 331 (591)
..+++.+|..+...|++++|+.+|+++++.++..++..+|.++.. .|+++
T Consensus 6 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~-------------------------- 59 (273)
T 1ouv_A 6 PKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLK-------------------------- 59 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHH--------------------------
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCcCCCHH--------------------------
Confidence 567889999999999999999999999998777888888888877 66664
Q ss_pred CCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHH----hCCHHHHHHHHHHHHhcCCChHHHHHHHHHHHH----cCCHHH
Q 007721 332 NLGREKIVDLNYASELDPTLSFPYKYRAVAKME----EGQIRAAISEIDRIIVFKLSVDCLELRAWLFIA----ADDYES 403 (591)
Q Consensus 332 ~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~----l~~~~eAl~~~~~al~l~p~~~~~~~r~~~~~~----~g~~~~ 403 (591)
+|+..|++|++++ ++.++.++|.++.. .+++++|+..|+++++.+ ++.++.++|.++.. .|++++
T Consensus 60 ----~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~-~~~a~~~lg~~~~~~~~~~~~~~~ 132 (273)
T 1ouv_A 60 ----KAASFYAKACDLN--YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK-YAEGCASLGGIYHDGKVVTRDFKK 132 (273)
T ss_dssp ----HHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHCSSSCCCHHH
T ss_pred ----HHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC-CccHHHHHHHHHHcCCCcccCHHH
Confidence 4555556666654 67788888888888 888888888888888764 56777888888888 888888
Q ss_pred HHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhh----hcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchh
Q 007721 404 ALRDTLALLALESNYMMFHGRVSGDHLVKLLNHH----VRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFL 479 (591)
Q Consensus 404 A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~----~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~ 479 (591)
|+..|++++++++.. +...++.+... ..++++ |+..++++++. +++.+
T Consensus 133 A~~~~~~a~~~~~~~--------a~~~lg~~~~~~~~~~~~~~~------------------A~~~~~~a~~~--~~~~a 184 (273)
T 1ouv_A 133 AVEYFTKACDLNDGD--------GCTILGSLYDAGRGTPKDLKK------------------ALASYDKACDL--KDSPG 184 (273)
T ss_dssp HHHHHHHHHHTTCHH--------HHHHHHHHHHHTSSSCCCHHH------------------HHHHHHHHHHT--TCHHH
T ss_pred HHHHHHHHHhcCcHH--------HHHHHHHHHHcCCCCCCCHHH------------------HHHHHHHHHHC--CCHHH
Confidence 888888888876432 22333322222 223333 47788888877 45788
Q ss_pred HhhhHHHHHH----hCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHH----cCCHHHHHHHHHHhhcccccHHHHHHH
Q 007721 480 RFRQSLLLLR----LNCQKAAMRCLRLARNHSSSEHERLVYEGWILYD----TGHREEALSRAEKSISIERTFEAFFLK 550 (591)
Q Consensus 480 ~~~~g~~l~~----l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~----~g~~eeAl~~~e~ai~l~~~~~~~~~~ 550 (591)
++++|.++.. .+++++|+..+++|++..| +++++++|.++.. .|++++|+..|++|+++.|+...+.+.
T Consensus 185 ~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~--~~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~l~ 261 (273)
T 1ouv_A 185 CFNAGNMYHHGEGATKNFKEALARYSKACELEN--GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDILK 261 (273)
T ss_dssp HHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC--HHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999 9999999999999999987 8899999999999 999999999999999999998877765
No 40
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.88 E-value=8.7e-22 Score=206.11 Aligned_cols=286 Identities=12% Similarity=0.017 Sum_probs=216.9
Q ss_pred HHHHHHhhhHHhhhccHHHHHHHHHHHhhcccc------chhhhhHHHHHHhCChHHHHHHHHHHHHhc------CCCHH
Q 007721 256 MLALHQLGCVMFEREEYKDACYYFEAAADAGHI------YSLAGLARAKYKVGQQYSAYKLINSIISEH------KPTGW 323 (591)
Q Consensus 256 ~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~~------~a~~~la~~~~~~G~~~~A~~~~~~aI~~~------~~~g~ 323 (591)
..++..+|..+...|++++|+..|++++++.+. .++..+|.++...|+++.|...+.+++... +..+.
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 88 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAK 88 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 456677888888888888888888888887442 356678888888888888888888877652 22344
Q ss_pred HHHHHHh----cCCcHHHHHHHHHHHHcCCCC------hHHHHhHHHHHHHhCC--------------------HHHHHH
Q 007721 324 MYQERSL----YNLGREKIVDLNYASELDPTL------SFPYKYRAVAKMEEGQ--------------------IRAAIS 373 (591)
Q Consensus 324 a~~~r~~----y~~~~eA~~dl~~Ai~LdP~~------~~ay~~rg~~l~~l~~--------------------~~eAl~ 373 (591)
++...+. .+..++|+..|++++++.|.. +.++.++|.++..+|+ +++|+.
T Consensus 89 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~ 168 (406)
T 3sf4_A 89 ASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVD 168 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHH
Confidence 4444432 123388888888888887765 4488899999999999 999999
Q ss_pred HHHHHHhcC------CC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhh
Q 007721 374 EIDRIIVFK------LS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADC 446 (591)
Q Consensus 374 ~~~~al~l~------p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~ 446 (591)
.+++++++. |. ...+.++|.++..+|++++|+..|++++++.|+...-.....+...++.+....+++++|
T Consensus 169 ~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A-- 246 (406)
T 3sf4_A 169 FYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETA-- 246 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH--
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHH--
Confidence 999998872 22 345677888999999999999999999998887533222233444444444444444444
Q ss_pred hhhhhhccccccccchHHHHHHHHHcCCCC------chhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCch------HHHH
Q 007721 447 WIKLYDRWSSVDDIGSLAVINQMLINDPGK------SFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSE------HERL 514 (591)
Q Consensus 447 ~~~l~~~~~~~~~~~al~~~~~al~~~P~~------~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~------~~a~ 514 (591)
+..+++++++.|.. +.++.++|.++..+|++++|+..+++|+++.+.. +.++
T Consensus 247 ----------------~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 310 (406)
T 3sf4_A 247 ----------------SEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRAC 310 (406)
T ss_dssp ----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred ----------------HHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 77888888888776 7789999999999999999999999999997665 7799
Q ss_pred HhHHHHHHHcCCHHHHHHHHHHhhcccccH-------HHHHHHHHHhhhcCC
Q 007721 515 VYEGWILYDTGHREEALSRAEKSISIERTF-------EAFFLKAYILADTNL 559 (591)
Q Consensus 515 ~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~-------~~~~~~~~~~~~~~~ 559 (591)
.++|.++..+|++++|+..|++|+++.+.. .+++..|.++...+-
T Consensus 311 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 362 (406)
T 3sf4_A 311 WSLGNAYTALGNHDQAMHFAEKHLEISREVGDKSGELTARLNLSDLQMVLGL 362 (406)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHhhH
Confidence 999999999999999999999999984433 267777766655443
No 41
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.88 E-value=1.1e-21 Score=213.93 Aligned_cols=211 Identities=11% Similarity=0.006 Sum_probs=183.1
Q ss_pred ChHHHHHHHHHHHHhcCCCHHHHHHHHh----cCCc-HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHH
Q 007721 303 QQYSAYKLINSIISEHKPTGWMYQERSL----YNLG-REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDR 377 (591)
Q Consensus 303 ~~~~A~~~~~~aI~~~~~~g~a~~~r~~----y~~~-~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~ 377 (591)
..+.++..+.+.....|..+.++..+|. .+.. ++|+..|++|++++|+++.+|.++|.++..+|++++|+..|++
T Consensus 83 ~~~~al~~l~~~~~~~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~ 162 (474)
T 4abn_A 83 EMEKTLQQMEEVLGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSG 162 (474)
T ss_dssp HHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCchhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3455666666666667777777777764 3456 8899999999999999999999999999999999999999999
Q ss_pred HHhcCCChHHHHHHHHHHHHc---------CCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhh--------cc
Q 007721 378 IIVFKLSVDCLELRAWLFIAA---------DDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHV--------RS 440 (591)
Q Consensus 378 al~l~p~~~~~~~r~~~~~~~---------g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~--------~~ 440 (591)
+++++|++..+.++|.++..+ |++++|+..|+++++++|++.. +...++.+.... ++
T Consensus 163 al~~~p~~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~------~~~~lg~~~~~~~~~~~~~~g~ 236 (474)
T 4abn_A 163 ALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGR------SWYILGNAYLSLYFNTGQNPKI 236 (474)
T ss_dssp HHTTCCCHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHH------HHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHhhCCCHHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHHHHhhccccch
Confidence 999999988888999999999 9999999999999999999843 333333333333 33
Q ss_pred cCchhhhhhhhhccccccccchHHHHHHHHHcCC---CCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhH
Q 007721 441 WSPADCWIKLYDRWSSVDDIGSLAVINQMLINDP---GKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYE 517 (591)
Q Consensus 441 ~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P---~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~ 517 (591)
+++ |+..|+++++++| .++.+|+++|.++..+|++++|+..|++|++++|++++++.++
T Consensus 237 ~~~------------------A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l 298 (474)
T 4abn_A 237 SQQ------------------ALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQRE 298 (474)
T ss_dssp HHH------------------HHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHH------------------HHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 333 4889999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHh
Q 007721 518 GWILYDTGHREEALSRAEKS 537 (591)
Q Consensus 518 G~~l~~~g~~eeAl~~~e~a 537 (591)
|.++..+|++++|+..|++.
T Consensus 299 ~~~~~~lg~~~eAi~~~~~~ 318 (474)
T 4abn_A 299 QQLLEFLSRLTSLLESKGKT 318 (474)
T ss_dssp HHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHhccc
Confidence 99999999999999988776
No 42
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.87 E-value=1.7e-22 Score=178.74 Aligned_cols=101 Identities=23% Similarity=0.232 Sum_probs=91.5
Q ss_pred ccCCCCCCceEEEEcCeEEEhhHHHHhhcCHHHHHhhcCCCCCCCCceeEecCCCCCHHHHHHHHHHHhcCCCCCCChhH
Q 007721 48 CLSLEEDDSVTFCVRDKEISFVRNKIASLSSPFKAMLYGGFVESKRKTIDFSHDGVSVEGLRAVEVYTRTSRVDLFCPGI 127 (591)
Q Consensus 48 ~~~~~~~~~V~f~v~g~~~~aHr~iLaa~S~yF~amf~~~~~Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~~~~~~~~~ 127 (591)
..+++..+||+|.|+|+.|+|||.||+++|+||++||+++|.|+...+|++ +++++++|+.+|+|+|||++. ++.++
T Consensus 19 l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l--~~~~~~~f~~ll~~~Yt~~~~-~~~~~ 95 (120)
T 2if5_A 19 QRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEI--DFVSAEALTALMDFAYTATLT-VSTAN 95 (120)
T ss_dssp HHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEEC--CSSCHHHHHHHHHHHHHSCCC-CCGGG
T ss_pred HHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEe--CCCCHHHHHHHHHHHcCCCCc-cCHHH
Confidence 445667788999999999999999999999999999999999999999999 899999999999999999999 99999
Q ss_pred HHHHHHHHhhhChHHHHHHHHHHH
Q 007721 128 VLELLSFANRFCCEEMKSACDAHL 151 (591)
Q Consensus 128 v~~lL~~A~~~~i~~L~~~C~~~L 151 (591)
+.+++.+|++|+++.|++.|++||
T Consensus 96 ~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 96 VGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHh
Confidence 999999999999999999999997
No 43
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.87 E-value=1.9e-21 Score=192.80 Aligned_cols=245 Identities=11% Similarity=0.011 Sum_probs=142.8
Q ss_pred hhhHHhhhccHHHHHHHHHHHhhcc------ccchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHh----c
Q 007721 262 LGCVMFEREEYKDACYYFEAAADAG------HIYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSL----Y 331 (591)
Q Consensus 262 lG~~~~~~g~~~eA~~~f~~Al~~~------~~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~----y 331 (591)
++......|++++|+..|+++++.. ...++..+|.++...|++++|+..+.+++...|+.+.++...+. .
T Consensus 11 ~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~ 90 (275)
T 1xnf_A 11 LAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQA 90 (275)
T ss_dssp SCCCCCCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHT
T ss_pred eeeccCccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHc
Confidence 4445566789999999999998862 23467778888888888877776666666666665555544432 1
Q ss_pred CCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 007721 332 NLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLSVDCLELRAWLFIAADDYESALRDTLAL 411 (591)
Q Consensus 332 ~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~~~~~~~r~~~~~~~g~~~~A~~d~~~a 411 (591)
+..++|+..|+++++++|+++.+|.++|.++..+|++++|+..|+++++++|+.........+....|++++|+..|+++
T Consensus 91 ~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~ 170 (275)
T 1xnf_A 91 GNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQH 170 (275)
T ss_dssp TCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 22266666666666666666666666666666666666666666666666665322222222334556666666666666
Q ss_pred HhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCC----chhHhhhHHHH
Q 007721 412 LALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGK----SFLRFRQSLLL 487 (591)
Q Consensus 412 l~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~----~~~~~~~g~~l 487 (591)
+...|++..... ... + .+...+..+|+..+.+++..+|.. +.+++++|.++
T Consensus 171 ~~~~~~~~~~~~------~~~-~------------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 225 (275)
T 1xnf_A 171 FEKSDKEQWGWN------IVE-F------------------YLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYY 225 (275)
T ss_dssp HHHSCCCSTHHH------HHH-H------------------HTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCcchHHHH------HHH-H------------------HHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHH
Confidence 666665421111 000 0 000011112355555555555532 56666666666
Q ss_pred HHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHH
Q 007721 488 LRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRA 534 (591)
Q Consensus 488 ~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~ 534 (591)
.++|++++|+..++++++++|++... .|.++..+|++++|++.|
T Consensus 226 ~~~g~~~~A~~~~~~al~~~p~~~~~---~~~~~~~l~~~~~a~~~~ 269 (275)
T 1xnf_A 226 LSLGDLDSATALFKLAVANNVHNFVE---HRYALLELSLLGQDQDDL 269 (275)
T ss_dssp HHTTCHHHHHHHHHHHHTTCCTTCHH---HHHHHHHHHHHHHC----
T ss_pred HHcCCHHHHHHHHHHHHhCCchhHHH---HHHHHHHHHHHHhhHHHH
Confidence 66666666666666666666655433 255666666666666655
No 44
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.87 E-value=6e-21 Score=186.84 Aligned_cols=205 Identities=16% Similarity=0.084 Sum_probs=178.7
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC--------hHHHHHHHHHHHHcCCHHHHHH
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS--------VDCLELRAWLFIAADDYESALR 406 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~--------~~~~~~r~~~~~~~g~~~~A~~ 406 (591)
++|+..|+++++++ +++.+|.++|.++..+|++++|+..++++++++|+ +..+..+|.++..+|++++|+.
T Consensus 22 ~~A~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 100 (258)
T 3uq3_A 22 DEAIEHYNKAWELH-KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIE 100 (258)
T ss_dssp HHHHHHHHHHHHHS-CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhh-ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHH
Confidence 78888888999999 89999999999999999999999999999999884 4667889999999999999999
Q ss_pred HHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHH
Q 007721 407 DTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLL 486 (591)
Q Consensus 407 d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~ 486 (591)
.|+++++++|+.. +.....++++ |+..+++++..+|.++.+++++|.+
T Consensus 101 ~~~~a~~~~~~~~--------------~~~~~~~~~~------------------a~~~~~~~~~~~~~~~~~~~~~~~~ 148 (258)
T 3uq3_A 101 YYQKSLTEHRTAD--------------ILTKLRNAEK------------------ELKKAEAEAYVNPEKAEEARLEGKE 148 (258)
T ss_dssp HHHHHHHHCCCHH--------------HHHHHHHHHH------------------HHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCchhH--------------HHHHHhHHHH------------------HHHHHHHHHHcCcchHHHHHHHHHH
Confidence 9999999999721 1111222333 4789999999999999999999999
Q ss_pred HHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH-HHHHHHHHhhhcCCCCCchh
Q 007721 487 LLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFE-AFFLKAYILADTNLDPESST 565 (591)
Q Consensus 487 l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~-~~~~~~~~~~~~~~~~~~~~ 565 (591)
+..+|++++|+..++++++++|+++.++.++|.+++.+|++++|+..++++++++|++. +++.+|.++.... .-.
T Consensus 149 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g----~~~ 224 (258)
T 3uq3_A 149 YFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVK----EYA 224 (258)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----CHH
T ss_pred HHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh----hHH
Confidence 99999999999999999999999999999999999999999999999999999999976 9999999887764 233
Q ss_pred HHHHHHHHHhc
Q 007721 566 YVIQLLEEALR 576 (591)
Q Consensus 566 ~~~~~~~~~~~ 576 (591)
.-++.++.|++
T Consensus 225 ~A~~~~~~a~~ 235 (258)
T 3uq3_A 225 SALETLDAART 235 (258)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44555666554
No 45
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.87 E-value=2.2e-21 Score=188.71 Aligned_cols=205 Identities=14% Similarity=0.069 Sum_probs=168.0
Q ss_pred CHHHHHHHHhcCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcC
Q 007721 321 TGWMYQERSLYNLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAAD 399 (591)
Q Consensus 321 ~g~a~~~r~~y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g 399 (591)
.|..+...+.+ ++|+..|+++++.+|+++.++..+|.++...|++++|+..|+++++++|+ ...+..+|.++..+|
T Consensus 29 ~a~~~~~~~~~---~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 105 (243)
T 2q7f_A 29 QMGRGSEFGDY---EKAAEAFTKAIEENKEDAIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKE 105 (243)
T ss_dssp ----------------CCTTHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhhCH---HHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhc
Confidence 34444444444 78888899999999999999999999999999999999999999999995 777888999999999
Q ss_pred CHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchh
Q 007721 400 DYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFL 479 (591)
Q Consensus 400 ~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~ 479 (591)
++++|+..|+++++++|++.. +...++.+....+++++| +..++++++.+|.++.+
T Consensus 106 ~~~~A~~~~~~~~~~~~~~~~------~~~~~a~~~~~~~~~~~A------------------~~~~~~~~~~~~~~~~~ 161 (243)
T 2q7f_A 106 MYKEAKDMFEKALRAGMENGD------LFYMLGTVLVKLEQPKLA------------------LPYLQRAVELNENDTEA 161 (243)
T ss_dssp CHHHHHHHHHHHHHHTCCSHH------HHHHHHHHHHHTSCHHHH------------------HHHHHHHHHHCTTCHHH
T ss_pred cHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHhccHHHH------------------HHHHHHHHHhCCccHHH
Confidence 999999999999999998732 333344444444444444 78899999999999999
Q ss_pred HhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH-HHHHHHH
Q 007721 480 RFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFE-AFFLKAY 552 (591)
Q Consensus 480 ~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~-~~~~~~~ 552 (591)
++.+|.++..+|++++|+..++++++.+|+++.++.++|.++..+|++++|+..|++++++.|+.. +++..+.
T Consensus 162 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 235 (243)
T 2q7f_A 162 RFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKALEMLDKAIDIQPDHMLALHAKKL 235 (243)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHCTTCHHHHHHHTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHccCcchHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999887 6665543
No 46
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.87 E-value=2.6e-21 Score=195.68 Aligned_cols=270 Identities=12% Similarity=0.027 Sum_probs=205.1
Q ss_pred HHHHHhhhHHhhhccHHHHHHHHHHHhhcccc------chhhhhHHHHHHhCChHHHHHHHHHHHHh------cCCCHHH
Q 007721 257 LALHQLGCVMFEREEYKDACYYFEAAADAGHI------YSLAGLARAKYKVGQQYSAYKLINSIISE------HKPTGWM 324 (591)
Q Consensus 257 ~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~~------~a~~~la~~~~~~G~~~~A~~~~~~aI~~------~~~~g~a 324 (591)
..++..|..+...|++++|+..|+++++..+. .++..+|.++...|+++.|+..+.+++.. .+..+.+
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 85 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKA 85 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 45667788888888888888888888887432 35667788888888888888888887765 2223334
Q ss_pred HHHHHh----cCCcHHHHHHHHHHHHcCCCChH------HHHhHHHHHHHhCC--------------------HHHHHHH
Q 007721 325 YQERSL----YNLGREKIVDLNYASELDPTLSF------PYKYRAVAKMEEGQ--------------------IRAAISE 374 (591)
Q Consensus 325 ~~~r~~----y~~~~eA~~dl~~Ai~LdP~~~~------ay~~rg~~l~~l~~--------------------~~eAl~~ 374 (591)
+...+. .+..++|+..|++++++.|.... ++.++|.++..+|+ +++|+..
T Consensus 86 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~ 165 (338)
T 3ro2_A 86 SGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDL 165 (338)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHH
Confidence 433332 12338888888888888776643 88999999999999 9999999
Q ss_pred HHHHHhcCC------C-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhh
Q 007721 375 IDRIIVFKL------S-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCW 447 (591)
Q Consensus 375 ~~~al~l~p------~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~ 447 (591)
+++++.+.+ . ...+..+|.++..+|++++|+..|++++++.|....-.....+....+.+....+++++|
T Consensus 166 ~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A--- 242 (338)
T 3ro2_A 166 YEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETA--- 242 (338)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHH---
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHH---
Confidence 999988732 1 345677888999999999999999999998876532222223444444444444444444
Q ss_pred hhhhhccccccccchHHHHHHHHHcCCCC------chhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCch------HHHHH
Q 007721 448 IKLYDRWSSVDDIGSLAVINQMLINDPGK------SFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSE------HERLV 515 (591)
Q Consensus 448 ~~l~~~~~~~~~~~al~~~~~al~~~P~~------~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~------~~a~~ 515 (591)
+..+++++++.|.. +.+++++|.++..+|++++|+..+++|+++.|.. ..++.
T Consensus 243 ---------------~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 307 (338)
T 3ro2_A 243 ---------------SEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACW 307 (338)
T ss_dssp ---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred ---------------HHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 77888888887776 7789999999999999999999999999997776 55899
Q ss_pred hHHHHHHHcCCHHHHHHHHHHhhcccccH
Q 007721 516 YEGWILYDTGHREEALSRAEKSISIERTF 544 (591)
Q Consensus 516 ~~G~~l~~~g~~eeAl~~~e~ai~l~~~~ 544 (591)
.+|.++..+|++++|+..|++|+++.++.
T Consensus 308 ~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 336 (338)
T 3ro2_A 308 SLGNAYTALGNHDQAMHFAEKHLEISREV 336 (338)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999998764
No 47
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.87 E-value=3.3e-21 Score=210.28 Aligned_cols=197 Identities=10% Similarity=0.005 Sum_probs=177.6
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCH-HHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQI-RAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALL 412 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~-~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al 412 (591)
++++..++++...+|+.+.+|+.+|.++..+|++ ++|+..|++|++++|+ +.+++.+|.++..+|++++|+..|++++
T Consensus 85 ~~al~~l~~~~~~~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al 164 (474)
T 4abn_A 85 EKTLQQMEEVLGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGAL 164 (474)
T ss_dssp HHHHHHHHHHHTTCCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCchhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 7788889999999999999999999999999999 9999999999999996 8889999999999999999999999999
Q ss_pred hcCCcchhhhhhchHhHHHHHHHhhh---------cccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhh
Q 007721 413 ALESNYMMFHGRVSGDHLVKLLNHHV---------RSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQ 483 (591)
Q Consensus 413 ~l~P~~~~~~~~~~~~~~~~~l~~~~---------~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~ 483 (591)
+++|+. .+...++.+.... +++++ |+..++++++++|.++.+|+++
T Consensus 165 ~~~p~~-------~~~~~lg~~~~~~~~~~~~~~~g~~~~------------------A~~~~~~al~~~p~~~~~~~~l 219 (474)
T 4abn_A 165 THCKNK-------VSLQNLSMVLRQLQTDSGDEHSRHVMD------------------SVRQAKLAVQMDVLDGRSWYIL 219 (474)
T ss_dssp TTCCCH-------HHHHHHHHHHTTCCCSCHHHHHHHHHH------------------HHHHHHHHHHHCTTCHHHHHHH
T ss_pred hhCCCH-------HHHHHHHHHHHHhccCChhhhhhhHHH------------------HHHHHHHHHHhCCCCHHHHHHH
Confidence 999983 2333333333333 33333 4889999999999999999999
Q ss_pred HHHHHHh--------CCHHHHHHHHHHHHhcCC---chHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH-HHHHHH
Q 007721 484 SLLLLRL--------NCQKAAMRCLRLARNHSS---SEHERLVYEGWILYDTGHREEALSRAEKSISIERTFE-AFFLKA 551 (591)
Q Consensus 484 g~~l~~l--------~~~~eA~~~~~~Al~l~p---~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~-~~~~~~ 551 (591)
|.++..+ |++++|+..|++|++++| +++++++++|.+++.+|++++|+..|++|++++|++. +++..|
T Consensus 220 g~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~ 299 (474)
T 4abn_A 220 GNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQ 299 (474)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 9999999 999999999999999999 9999999999999999999999999999999999988 788888
Q ss_pred HHhhh
Q 007721 552 YILAD 556 (591)
Q Consensus 552 ~~~~~ 556 (591)
.++..
T Consensus 300 ~~~~~ 304 (474)
T 4abn_A 300 QLLEF 304 (474)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 48
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.86 E-value=4.7e-21 Score=179.84 Aligned_cols=170 Identities=12% Similarity=0.101 Sum_probs=144.6
Q ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCC
Q 007721 322 GWMYQERSLYNLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADD 400 (591)
Q Consensus 322 g~a~~~r~~y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~ 400 (591)
|.+|..+|.| ++|+..|++|++++|+++.+|.++|.++..+|++++|+..+.+++..+|+ +..+..+|.++...++
T Consensus 12 G~~~~~~g~~---~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (184)
T 3vtx_A 12 GDKKRTKGDF---DGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDE 88 (184)
T ss_dssp HHHHHHHTCH---HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCH---HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCC
Confidence 4444444444 88888899999999999999999999999999999999999999999996 7778889999999999
Q ss_pred HHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhH
Q 007721 401 YESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLR 480 (591)
Q Consensus 401 ~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~ 480 (591)
++.|+..++++++++|++. .+...++.+....+++++| +..++++++++|.++.+|
T Consensus 89 ~~~a~~~~~~a~~~~~~~~------~~~~~lg~~~~~~g~~~~A------------------~~~~~~~l~~~p~~~~~~ 144 (184)
T 3vtx_A 89 KQAAIDALQRAIALNTVYA------DAYYKLGLVYDSMGEHDKA------------------IEAYEKTISIKPGFIRAY 144 (184)
T ss_dssp HHHHHHHHHHHHHHCTTCH------HHHHHHHHHHHHTTCHHHH------------------HHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHhCccch------HHHHHHHHHHHHhCCchhH------------------HHHHHHHHHhcchhhhHH
Confidence 9999999999999999883 3444455555555555555 889999999999999999
Q ss_pred hhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHH
Q 007721 481 FRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWI 520 (591)
Q Consensus 481 ~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~ 520 (591)
+++|.++.++|++++|+..|++|++++|+++ .+++|.+
T Consensus 145 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~a--~~~lali 182 (184)
T 3vtx_A 145 QSIGLAYEGKGLRDEAVKYFKKALEKEEKKA--KYELALV 182 (184)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTTHHHH--HHCSCCS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhCCccCH--HHHHHhh
Confidence 9999999999999999999999999999975 4666643
No 49
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.86 E-value=1.2e-20 Score=183.62 Aligned_cols=177 Identities=10% Similarity=0.051 Sum_probs=136.6
Q ss_pred CCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCC--ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhch
Q 007721 349 PTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKL--SVDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVS 426 (591)
Q Consensus 349 P~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p--~~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~ 426 (591)
|.++.+|+++|.++...|++++|+..|+++++++| +...++++|.++..+|++++|+..|+++++++|++. .
T Consensus 4 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~------~ 77 (228)
T 4i17_A 4 TTDPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLA------N 77 (228)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHH------H
T ss_pred ccCHHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchH------H
Confidence 45567777777777777777777777777777775 356666677777777777777777777777777752 2
Q ss_pred HhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCc-------hhHhhhHHHHHHhCCHHHHHHH
Q 007721 427 GDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKS-------FLRFRQSLLLLRLNCQKAAMRC 499 (591)
Q Consensus 427 ~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~-------~~~~~~g~~l~~l~~~~eA~~~ 499 (591)
+...++.+....+++++| +..++++++++|+++ .+|+++|.++..+|++++|+..
T Consensus 78 ~~~~l~~~~~~~~~~~~A------------------~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~ 139 (228)
T 4i17_A 78 AYIGKSAAYRDMKNNQEY------------------IATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEEN 139 (228)
T ss_dssp HHHHHHHHHHHTTCHHHH------------------HHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHH------------------HHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHH
Confidence 333344333334444444 667777777777777 5699999999999999999999
Q ss_pred HHHHHhcCCc--hHHHHHhHHHHHHHcCCH---------------------------HHHHHHHHHhhcccccHH-HHHH
Q 007721 500 LRLARNHSSS--EHERLVYEGWILYDTGHR---------------------------EEALSRAEKSISIERTFE-AFFL 549 (591)
Q Consensus 500 ~~~Al~l~p~--~~~a~~~~G~~l~~~g~~---------------------------eeAl~~~e~ai~l~~~~~-~~~~ 549 (591)
|++|++++|+ ++++++++|.+++.+|+. ++|+..|++|++++|+.. +..+
T Consensus 140 ~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~ 219 (228)
T 4i17_A 140 YKHATDVTSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNRTEIKQM 219 (228)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHH
Confidence 9999999999 999999999999999998 999999999999999876 4433
No 50
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.86 E-value=1.3e-21 Score=174.87 Aligned_cols=103 Identities=15% Similarity=0.235 Sum_probs=96.0
Q ss_pred ccCCCCCCceEEEEcCeEEEhhHHHHhhcCHHHHHhhcCCCCCCCCceeEecCCCCCHHHHHHHHHHHhcCCCCCCChhH
Q 007721 48 CLSLEEDDSVTFCVRDKEISFVRNKIASLSSPFKAMLYGGFVESKRKTIDFSHDGVSVEGLRAVEVYTRTSRVDLFCPGI 127 (591)
Q Consensus 48 ~~~~~~~~~V~f~v~g~~~~aHr~iLaa~S~yF~amf~~~~~Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~~~~~~~~~ 127 (591)
...++..+||+|+|+|+.|+|||.||+++|+||++||+++|.| ...+|+|+ +++++++|+.+|+|+|||++. ++.++
T Consensus 23 l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~-~~~~~~~f~~ll~~~Ytg~~~-~~~~~ 99 (127)
T 1r29_A 23 LRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLD-PEINPEGFNILLDFMYTSRLN-LREGN 99 (127)
T ss_dssp HHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECC-TTSCHHHHHHHHHHHHHSCCC-CCTTT
T ss_pred HHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeC-CCCCHHHHHHHHHHHcCCCcC-cCHHH
Confidence 4456777889999999999999999999999999999999999 67789884 589999999999999999999 99999
Q ss_pred HHHHHHHHhhhChHHHHHHHHHHHHh
Q 007721 128 VLELLSFANRFCCEEMKSACDAHLAS 153 (591)
Q Consensus 128 v~~lL~~A~~~~i~~L~~~C~~~L~~ 153 (591)
+.+|+.+|++|+++.|++.|++||.+
T Consensus 100 ~~~ll~~A~~~~i~~L~~~c~~~l~~ 125 (127)
T 1r29_A 100 IMAVMATAMYLQMEHVVDTCRKFIKA 125 (127)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 99999999999999999999999975
No 51
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.86 E-value=2e-20 Score=185.61 Aligned_cols=214 Identities=11% Similarity=-0.002 Sum_probs=181.1
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCChH----HHHHHHHHHHHcCCHHHHHHHHHH
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLSVD----CLELRAWLFIAADDYESALRDTLA 410 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~~~----~~~~r~~~~~~~g~~~~A~~d~~~ 410 (591)
++|+..|+++++++|+++.+|.++|.++..+|++++|+..++++++..+++. ++..+|.++..+|++++|+..|++
T Consensus 20 ~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~ 99 (272)
T 3u4t_A 20 AEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQQYQA 99 (272)
T ss_dssp HHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 8888999999999999999999999999999999999999999999433333 478899999999999999999999
Q ss_pred HHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHh
Q 007721 411 LLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRL 490 (591)
Q Consensus 411 al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l 490 (591)
+++++|++. .+...++.+....+++++| +..++++++++|.++.+++++|......
T Consensus 100 a~~~~~~~~------~~~~~l~~~~~~~~~~~~A------------------~~~~~~al~~~~~~~~~~~~l~~~~~~~ 155 (272)
T 3u4t_A 100 AVDRDTTRL------DMYGQIGSYFYNKGNFPLA------------------IQYMEKQIRPTTTDPKVFYELGQAYYYN 155 (272)
T ss_dssp HHHHSTTCT------HHHHHHHHHHHHTTCHHHH------------------HHHHGGGCCSSCCCHHHHHHHHHHHHHT
T ss_pred HHhcCcccH------HHHHHHHHHHHHccCHHHH------------------HHHHHHHhhcCCCcHHHHHHHHHHHHHH
Confidence 999999873 3444455444455555555 8899999999999999999999666666
Q ss_pred CCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCC---HHHHHHHHHHhhccc---ccH------HHHHHHHHHhhhcC
Q 007721 491 NCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGH---REEALSRAEKSISIE---RTF------EAFFLKAYILADTN 558 (591)
Q Consensus 491 ~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~---~eeAl~~~e~ai~l~---~~~------~~~~~~~~~~~~~~ 558 (591)
+++++|+..++++++++|++..+++++|.++..+|+ +++|+..|++++++. |+. ++|+..|..+...+
T Consensus 156 ~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 235 (272)
T 3u4t_A 156 KEYVKADSSFVKVLELKPNIYIGYLWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINR 235 (272)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHSTTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcC
Confidence 799999999999999999999999999999999999 999999999999986 652 58888888877643
Q ss_pred CCCCchhHHHHHHHHHhc
Q 007721 559 LDPESSTYVIQLLEEALR 576 (591)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~ 576 (591)
--..-++.++.|++
T Consensus 236 ----~~~~A~~~~~~al~ 249 (272)
T 3u4t_A 236 ----DKVKADAAWKNILA 249 (272)
T ss_dssp ----CHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHh
Confidence 23344556666653
No 52
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.85 E-value=6e-20 Score=188.13 Aligned_cols=231 Identities=11% Similarity=-0.073 Sum_probs=180.4
Q ss_pred HHHHHHHHHHhhccc--cchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcCCcHHHHHHHHHHHH-cCC
Q 007721 273 KDACYYFEAAADAGH--IYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLYNLGREKIVDLNYASE-LDP 349 (591)
Q Consensus 273 ~eA~~~f~~Al~~~~--~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~~~~eA~~dl~~Ai~-LdP 349 (591)
++|+..|++|+...| ..++..+|..+...|+. +... |......+.+ ++|...|++|++ ++|
T Consensus 33 ~~a~~~~~~al~~~p~~~~~w~~~~~~~~~~~~~----------l~~~---g~~~~~~~~~---~~A~~~~~rAl~~~~p 96 (308)
T 2ond_A 33 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKL----------LAEK---GDMNNAKLFS---DEAANIYERAISTLLK 96 (308)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----------HHHT---SCCHHHHHHH---HHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhchh----------hhhc---cchhhcccch---HHHHHHHHHHHHHhCc
Confidence 667778888877743 34555666555433210 0000 0000011112 789999999999 899
Q ss_pred CChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hH-HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchH
Q 007721 350 TLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VD-CLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSG 427 (591)
Q Consensus 350 ~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~-~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~ 427 (591)
++..+|.++|.++..+|++++|+..|+++|+++|+ +. .|...|.++...|++++|+..|++|++++|.....+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~----- 171 (308)
T 2ond_A 97 KNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVY----- 171 (308)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHH-----
T ss_pred ccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHH-----
Confidence 99999999999999999999999999999999995 65 788899999999999999999999999999763321
Q ss_pred hHHHHHHHh-hhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhc
Q 007721 428 DHLVKLLNH-HVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNH 506 (591)
Q Consensus 428 ~~~~~~l~~-~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l 506 (591)
.....+.. ..+++++ |..+|+++|+.+|.++.+|.+.|..+.++|++++|+..|++|++.
T Consensus 172 -~~~a~~~~~~~~~~~~------------------A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 172 -VTAALMEYYCSKDKSV------------------AFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp -HHHHHHHHHTSCCHHH------------------HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHS
T ss_pred -HHHHHHHHHHcCCHHH------------------HHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 11111111 1122223 588999999999999999999999999999999999999999995
Q ss_pred ---CCc-hHHHHHhHHHHHHHcCCHHHHHHHHHHhhccccc
Q 007721 507 ---SSS-EHERLVYEGWILYDTGHREEALSRAEKSISIERT 543 (591)
Q Consensus 507 ---~p~-~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~ 543 (591)
.|+ ....+...+..+...|++++|...+++++++.|+
T Consensus 233 ~~l~p~~~~~l~~~~~~~~~~~g~~~~a~~~~~~a~~~~p~ 273 (308)
T 2ond_A 233 GSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFRE 273 (308)
T ss_dssp SSSCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTT
T ss_pred cCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHccc
Confidence 664 6778888899999999999999999999999996
No 53
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.85 E-value=3.8e-22 Score=181.14 Aligned_cols=107 Identities=17% Similarity=0.149 Sum_probs=98.6
Q ss_pred ccCCCCCCceEEEEcCeEEEhhHHHHhhcCHHHHHhhcCCCCCCCCceeEecCC-CCCHHHHHHHHHHHhcCCCCCCChh
Q 007721 48 CLSLEEDDSVTFCVRDKEISFVRNKIASLSSPFKAMLYGGFVESKRKTIDFSHD-GVSVEGLRAVEVYTRTSRVDLFCPG 126 (591)
Q Consensus 48 ~~~~~~~~~V~f~v~g~~~~aHr~iLaa~S~yF~amf~~~~~Es~~~~I~l~~~-~vs~~~~~~ll~ylYtg~~~~~~~~ 126 (591)
...++..+||+|+|+|+.|+|||.||+++|+||++||++++.|+ ..|.+ + ++++++|+.+|+|+|||++. ++.+
T Consensus 30 l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~--~~i~l--~~~v~~~~~~~lL~~~Ytg~~~-i~~~ 104 (138)
T 2z8h_A 30 QRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDAE--LTVTL--PEEVTVKGFEPLIQFAYTAKLI-LSKD 104 (138)
T ss_dssp HHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCTT--EEEEC--CTTSCHHHHHHHHHHHHHSCCC-CCTT
T ss_pred HHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCCC--ceEEe--CCCCCHHHHHHHHHHhcCCCcc-cCHH
Confidence 33556777899999999999999999999999999999999875 47888 5 89999999999999999999 9999
Q ss_pred HHHHHHHHHhhhChHHHHHHHHHHHHhhcCCHHh
Q 007721 127 IVLELLSFANRFCCEEMKSACDAHLASLVGDIED 160 (591)
Q Consensus 127 ~v~~lL~~A~~~~i~~L~~~C~~~L~~~i~~~~n 160 (591)
++.+|+.+|++|+++.|++.|++||.+.++ .+|
T Consensus 105 ~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~-~sn 137 (138)
T 2z8h_A 105 NVDEVCRCVEFLSVHNIEESCFQFLKFKFL-DST 137 (138)
T ss_dssp THHHHHHHHHHHTCGGGHHHHHHHTTCCCS-CCC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhcc-ccc
Confidence 999999999999999999999999999998 565
No 54
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.85 E-value=6.2e-20 Score=187.30 Aligned_cols=265 Identities=11% Similarity=-0.012 Sum_probs=210.0
Q ss_pred chhHHHHHHHHhhcchhhhHHHHHHHHhhhHHhhhccHHHHHHHHHHHhhccccchhhhhHHHHHHhCChHHHHHHHHHH
Q 007721 235 SNTTVMLLERLGECSTERWQRMLALHQLGCVMFEREEYKDACYYFEAAADAGHIYSLAGLARAKYKVGQQYSAYKLINSI 314 (591)
Q Consensus 235 ~~~~v~lLe~~~~~~~~~~~~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~~~a~~~la~~~~~~G~~~~A~~~~~~a 314 (591)
.+.++..++++....++.. ..+...++.++...|++++|+..++.. ..+...++..++..+...|++++|+..+.++
T Consensus 15 y~~ai~~~~~~~~~~p~~~--~e~~~~l~r~yi~~g~~~~al~~~~~~-~~~~~~a~~~la~~~~~~~~~~~A~~~l~~l 91 (291)
T 3mkr_A 15 YQQCINEAQRVKPSSPERD--VERDVFLYRAYLAQRKYGVVLDEIKPS-SAPELQAVRMFAEYLASHSRRDAIVAELDRE 91 (291)
T ss_dssp HHHHHHHHHHSCCCSHHHH--HHHHHHHHHHHHHTTCHHHHHHHSCTT-SCHHHHHHHHHHHHHHCSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCCchhh--HHHHHHHHHHHHHCCCHHHHHHHhccc-CChhHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 5556666666555544431 234456788999999999999877542 2222346667788888899999999999999
Q ss_pred HHh--cCCCHHHHHHHHh----cCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCChH-H
Q 007721 315 ISE--HKPTGWMYQERSL----YNLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLSVD-C 387 (591)
Q Consensus 315 I~~--~~~~g~a~~~r~~----y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~~~-~ 387 (591)
+.. +|+.+.++...+. -+..++|+..|++ |++..++..+|.++..+|++++|+..|+++++++|+.. .
T Consensus 92 l~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~-----~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~ 166 (291)
T 3mkr_A 92 MSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ-----GDSLECMAMTVQILLKLDRLDLARKELKKMQDQDEDATLT 166 (291)
T ss_dssp HHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT-----CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC-----CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHH
Confidence 986 5888777766653 2344899999988 99999999999999999999999999999999999743 2
Q ss_pred HHHHHH--HHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHH
Q 007721 388 LELRAW--LFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAV 465 (591)
Q Consensus 388 ~~~r~~--~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~ 465 (591)
....++ ++...|++++|+..|+++++.+|++ ..+...++.+....+++++| ...
T Consensus 167 ~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~------~~~~~~la~~~~~~g~~~eA------------------~~~ 222 (291)
T 3mkr_A 167 QLATAWVSLAAGGEKLQDAYYIFQEMADKCSPT------LLLLNGQAACHMAQGRWEAA------------------EGV 222 (291)
T ss_dssp HHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCC------HHHHHHHHHHHHHTTCHHHH------------------HHH
T ss_pred HHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHcCCHHHH------------------HHH
Confidence 222343 3445699999999999999999987 34555555556666666666 889
Q ss_pred HHHHHHcCCCCchhHhhhHHHHHHhCCHHH-HHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHH
Q 007721 466 INQMLINDPGKSFLRFRQSLLLLRLNCQKA-AMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAE 535 (591)
Q Consensus 466 ~~~al~~~P~~~~~~~~~g~~l~~l~~~~e-A~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e 535 (591)
++++|+++|+++++++++|.++..+|+..+ |.+.++++++++|+++.+.. ..-+.+.||++...|.
T Consensus 223 l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~d----~~~~~~~fd~~~~~~~ 289 (291)
T 3mkr_A 223 LQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKE----YRAKENDFDRLVLQYA 289 (291)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHH----HHHHHHHHHHHHHHHS
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCChHHHH----HHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999976 57889999999999998876 4667788888888873
No 55
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.85 E-value=8e-22 Score=180.33 Aligned_cols=102 Identities=16% Similarity=0.223 Sum_probs=90.8
Q ss_pred ccCCCCCCceEEEEcCeEEEhhHHHHhhcCHHHHHhhcCCCCC--CCCceeEecCCCCCHHHHHHHHHHHhcCCCCCCCh
Q 007721 48 CLSLEEDDSVTFCVRDKEISFVRNKIASLSSPFKAMLYGGFVE--SKRKTIDFSHDGVSVEGLRAVEVYTRTSRVDLFCP 125 (591)
Q Consensus 48 ~~~~~~~~~V~f~v~g~~~~aHr~iLaa~S~yF~amf~~~~~E--s~~~~I~l~~~~vs~~~~~~ll~ylYtg~~~~~~~ 125 (591)
...++..+||+|+|+|+.|+|||.||+++|+||++||+++|.| +...+|.| +++++++|+.+|+|+|||++. ++.
T Consensus 41 l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l--~~v~~~~f~~lL~fiYtg~~~-i~~ 117 (144)
T 2ppi_A 41 FREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIEL--EGISVMVMREILDYIFSGQIR-LNE 117 (144)
T ss_dssp TTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEEC--CSSCHHHHHHHHHHHTTSCCC-CCT
T ss_pred HHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEe--CCCCHHHHHHHHHHHhCCCCC-CCH
Confidence 3456677789999999999999999999999999999999876 56779999 999999999999999999999 999
Q ss_pred hHHHHHHHHHhhhChHHHHHHHHHHHH
Q 007721 126 GIVLELLSFANRFCCEEMKSACDAHLA 152 (591)
Q Consensus 126 ~~v~~lL~~A~~~~i~~L~~~C~~~L~ 152 (591)
+++.+|+.+|++|+++.|++.|++||.
T Consensus 118 ~~v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 118 DTIQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 999999999999999999999999874
No 56
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.85 E-value=2.2e-20 Score=181.65 Aligned_cols=217 Identities=13% Similarity=0.064 Sum_probs=159.1
Q ss_pred HHHHHHhhhHHhhhccHHHHHHHHHHHhhccc--cchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcCC
Q 007721 256 MLALHQLGCVMFEREEYKDACYYFEAAADAGH--IYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLYNL 333 (591)
Q Consensus 256 ~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~--~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~~ 333 (591)
..+++.+|..+...|++++|+..|+++++..+ ..++..+|.++...|++
T Consensus 23 ~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~~~~----------------------------- 73 (243)
T 2q7f_A 23 SMTGGQQMGRGSEFGDYEKAAEAFTKAIEENKEDAIPYINFANLLSSVNEL----------------------------- 73 (243)
T ss_dssp -------------------CCTTHHHHHTTCTTCHHHHHHHHHHHHHTTCH-----------------------------
T ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCH-----------------------------
Confidence 45678899999999999999999999988754 34566667676666665
Q ss_pred cHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 007721 334 GREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALL 412 (591)
Q Consensus 334 ~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al 412 (591)
++|+..|+++++++|+++.+|..+|.++..+|++++|+..++++++++|+ +..+..+|.++..+|++++|+..|++++
T Consensus 74 -~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~ 152 (243)
T 2q7f_A 74 -ERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAV 152 (243)
T ss_dssp -HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 56666777888888888999999999999999999999999999999985 7777888999999999999999999999
Q ss_pred hcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCC
Q 007721 413 ALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNC 492 (591)
Q Consensus 413 ~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~ 492 (591)
+++|++.. +....+.+....+++++| +..+++++..+|.++.+++.+|.++..+|+
T Consensus 153 ~~~~~~~~------~~~~l~~~~~~~~~~~~A------------------~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 208 (243)
T 2q7f_A 153 ELNENDTE------ARFQFGMCLANEGMLDEA------------------LSQFAAVTEQDPGHADAFYNAGVTYAYKEN 208 (243)
T ss_dssp HHCTTCHH------HHHHHHHHHHHHTCCHHH------------------HHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HhCCccHH------HHHHHHHHHHHcCCHHHH------------------HHHHHHHHHhCcccHHHHHHHHHHHHHccC
Confidence 99998732 333444444444444444 788999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCC
Q 007721 493 QKAAMRCLRLARNHSSSEHERLVYEGWILYDTGH 526 (591)
Q Consensus 493 ~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~ 526 (591)
+++|+..++++++++|++..++..++.+....|+
T Consensus 209 ~~~A~~~~~~~~~~~p~~~~~~~~~~~l~~~~~~ 242 (243)
T 2q7f_A 209 REKALEMLDKAIDIQPDHMLALHAKKLLGHHHHH 242 (243)
T ss_dssp TTHHHHHHHHHHHHCTTCHHHHHHHTC-------
T ss_pred HHHHHHHHHHHHccCcchHHHHHHHHHHHhhccC
Confidence 9999999999999999999999999988766654
No 57
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.85 E-value=7.3e-22 Score=174.56 Aligned_cols=98 Identities=13% Similarity=0.051 Sum_probs=90.1
Q ss_pred CCCCCCceEEEEcCeEEEhhHHHHhhcCHHHHHhhcCCCCCCCCceeEecCCCCCHHHHHHHHHHHhcCCCCCCChhHHH
Q 007721 50 SLEEDDSVTFCVRDKEISFVRNKIASLSSPFKAMLYGGFVESKRKTIDFSHDGVSVEGLRAVEVYTRTSRVDLFCPGIVL 129 (591)
Q Consensus 50 ~~~~~~~V~f~v~g~~~~aHr~iLaa~S~yF~amf~~~~~Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~~~~~~~~~v~ 129 (591)
.++..+||+|.|||++|+|||.||+++|+||++||++++ ..+|+| +++++++|+.+|+|+|||++. ++.+++.
T Consensus 20 ~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~----~~~i~l--~~~~~~~f~~ll~~iYtg~~~-~~~~~v~ 92 (119)
T 3b84_A 20 EKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS----GGSVVL--PAGFAEIFGLLLDFFYTGHLA-LTSGNRD 92 (119)
T ss_dssp HHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT----CCCEEE--CGGGHHHHHHHHHHHHHSCCC-CCTTTHH
T ss_pred hcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC----CCeEEe--CCCCHHHHHHHHHHHcCCCCc-cCHHHHH
Confidence 456777899999999999999999999999999999987 568999 999999999999999999999 9999999
Q ss_pred HHHHHHhhhChHHHHHHHHHHHHhh
Q 007721 130 ELLSFANRFCCEEMKSACDAHLASL 154 (591)
Q Consensus 130 ~lL~~A~~~~i~~L~~~C~~~L~~~ 154 (591)
+++.+|++|+++.|++.|++||.+.
T Consensus 93 ~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 93 QVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp HHHHHHHHTTCHHHHHHHHHCC---
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 9999999999999999999998753
No 58
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.85 E-value=1.1e-19 Score=178.34 Aligned_cols=188 Identities=15% Similarity=0.040 Sum_probs=162.1
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLA 413 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~ 413 (591)
++|+..|+++++++|+++.+|..+|.++...|++++|+..|+++++++|+ ...+..+|.++..+|++++|+..|+++++
T Consensus 54 ~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 133 (252)
T 2ho1_A 54 EQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQ 133 (252)
T ss_dssp GGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 77788888888888999999999999999999999999999999999985 67778888999999999999999999998
Q ss_pred --cCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhC
Q 007721 414 --LESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLN 491 (591)
Q Consensus 414 --l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~ 491 (591)
.+|++. .+...++.+....+++++| +..++++++.+|.++.+++.+|.++..+|
T Consensus 134 ~~~~~~~~------~~~~~la~~~~~~g~~~~A------------------~~~~~~~~~~~~~~~~~~~~la~~~~~~g 189 (252)
T 2ho1_A 134 DTLYPERS------RVFENLGLVSLQMKKPAQA------------------KEYFEKSLRLNRNQPSVALEMADLLYKER 189 (252)
T ss_dssp CTTCTTHH------HHHHHHHHHHHHTTCHHHH------------------HHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred CccCcccH------HHHHHHHHHHHHcCCHHHH------------------HHHHHHHHhcCcccHHHHHHHHHHHHHcC
Confidence 666652 2333333333344444444 78899999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHHH
Q 007721 492 CQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFEA 546 (591)
Q Consensus 492 ~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~~ 546 (591)
++++|+..++++++..|++.+++..++.++..+|++++|...+++++++.|+...
T Consensus 190 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~p~~~~ 244 (252)
T 2ho1_A 190 EYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFEDRDTAASYGLQLKRLYPGSLE 244 (252)
T ss_dssp CHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSHH
T ss_pred CHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCHH
Confidence 9999999999999999999999999999999999999999999999999998774
No 59
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.85 E-value=3.3e-21 Score=170.85 Aligned_cols=100 Identities=17% Similarity=0.139 Sum_probs=92.5
Q ss_pred ccCCCCCCceEEEEcCeEEEhhHHHHhhcCHHHHHhhcCCCCCCCCceeEecCCCCCHHHHHHHHHHHhcCCCCCCChhH
Q 007721 48 CLSLEEDDSVTFCVRDKEISFVRNKIASLSSPFKAMLYGGFVESKRKTIDFSHDGVSVEGLRAVEVYTRTSRVDLFCPGI 127 (591)
Q Consensus 48 ~~~~~~~~~V~f~v~g~~~~aHr~iLaa~S~yF~amf~~~~~Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~~~~~~~~~ 127 (591)
...++..+||+|+|+|+.|+|||.||+++|+||++||+++ ..+|++ +++++++|+.+|+|+|||++. ++.++
T Consensus 22 l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~-----~~~i~l--~~~~~~~f~~ll~~~Ytg~~~-~~~~~ 93 (121)
T 1buo_A 22 MRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN-----SQHYTL--DFLSPKTFQQILEYAYTATLQ-AKAED 93 (121)
T ss_dssp HHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC-----CSEEEE--CSSCHHHHHHHHHHHHHSCCC-CCGGG
T ss_pred HHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC-----CcEEEe--CCCCHHHHHHHHHhhcCCCcC-CCHHH
Confidence 3345677789999999999999999999999999999875 458999 999999999999999999999 99999
Q ss_pred HHHHHHHHhhhChHHHHHHHHHHHHhhc
Q 007721 128 VLELLSFANRFCCEEMKSACDAHLASLV 155 (591)
Q Consensus 128 v~~lL~~A~~~~i~~L~~~C~~~L~~~i 155 (591)
+.+++.+|++|+++.|++.|+++|.+.|
T Consensus 94 ~~~ll~~A~~~~i~~L~~~c~~~l~~~I 121 (121)
T 1buo_A 94 LDDLLYAAEILEIEYLEEQCLKMLETIQ 121 (121)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHhC
Confidence 9999999999999999999999998764
No 60
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.84 E-value=7.3e-20 Score=181.36 Aligned_cols=221 Identities=14% Similarity=0.090 Sum_probs=184.7
Q ss_pred HHHhCChHHHHHHHHHHHHhc----CCCHHHHHHHHh----cCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHH
Q 007721 298 KYKVGQQYSAYKLINSIISEH----KPTGWMYQERSL----YNLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIR 369 (591)
Q Consensus 298 ~~~~G~~~~A~~~~~~aI~~~----~~~g~a~~~r~~----y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~ 369 (591)
....|++++|+..+.+++... |..+.++..++. .+..++|+..|+++++++|+++.+|.++|.++..+|+++
T Consensus 15 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~ 94 (275)
T 1xnf_A 15 LQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFD 94 (275)
T ss_dssp CCCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHH
T ss_pred cCccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHH
Confidence 344578899999999999874 344555555543 233499999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhh
Q 007721 370 AAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWI 448 (591)
Q Consensus 370 eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~ 448 (591)
+|+..|+++++++|+ +..+..+|.++..+|++++|+..|+++++++|++..... ... +....+++++
T Consensus 95 ~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~------~~~-~~~~~~~~~~----- 162 (275)
T 1xnf_A 95 AAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSL------WLY-LAEQKLDEKQ----- 162 (275)
T ss_dssp HHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH------HHH-HHHHHHCHHH-----
T ss_pred HHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHH------HHH-HHHHhcCHHH-----
Confidence 999999999999995 788899999999999999999999999999999853211 111 1112233333
Q ss_pred hhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCch----HHHHHhHHHHHHHc
Q 007721 449 KLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSE----HERLVYEGWILYDT 524 (591)
Q Consensus 449 ~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~----~~a~~~~G~~l~~~ 524 (591)
|+..+.+++...|.+...+. .+..+...+..++|+..++++++..|.. ++++.++|.+++.+
T Consensus 163 -------------A~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 228 (275)
T 1xnf_A 163 -------------AKEVLKQHFEKSDKEQWGWN-IVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSL 228 (275)
T ss_dssp -------------HHHHHHHHHHHSCCCSTHHH-HHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -------------HHHHHHHHHhcCCcchHHHH-HHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHc
Confidence 48899999999999988765 7777788888999999999999998854 89999999999999
Q ss_pred CCHHHHHHHHHHhhcccccH
Q 007721 525 GHREEALSRAEKSISIERTF 544 (591)
Q Consensus 525 g~~eeAl~~~e~ai~l~~~~ 544 (591)
|++++|+..|+++++++|+.
T Consensus 229 g~~~~A~~~~~~al~~~p~~ 248 (275)
T 1xnf_A 229 GDLDSATALFKLAVANNVHN 248 (275)
T ss_dssp TCHHHHHHHHHHHHTTCCTT
T ss_pred CCHHHHHHHHHHHHhCCchh
Confidence 99999999999999999954
No 61
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.84 E-value=3.1e-20 Score=194.26 Aligned_cols=303 Identities=12% Similarity=0.036 Sum_probs=228.4
Q ss_pred HHHHHHhhhhccccchhHHHHHHHHhhcchhhh-HHHHHHHHhhhHHhhhccHHHHHHHHHHHhhcc------c--cchh
Q 007721 221 YYFLSQVAMEKDRVSNTTVMLLERLGECSTERW-QRMLALHQLGCVMFEREEYKDACYYFEAAADAG------H--IYSL 291 (591)
Q Consensus 221 ~a~Ls~v~~d~~~r~~~~v~lLe~~~~~~~~~~-~~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~------~--~~a~ 291 (591)
....+........ .+.+...+++++...+... ....+++.+|.++...|++++|+.+|++|+.+. + ..++
T Consensus 12 l~~~g~~~~~~g~-~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 90 (406)
T 3sf4_A 12 LALEGERLCKSGD-CRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKAS 90 (406)
T ss_dssp HHHHHHHHHHTTC-HHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHhcc-HHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence 3445555554444 7788889998877554432 234678999999999999999999999998772 1 3467
Q ss_pred hhhHHHHHHhCChHHHHHHHHHHHHhcCC-------------CHHHHHHHHh--------------------cCCcHHHH
Q 007721 292 AGLARAKYKVGQQYSAYKLINSIISEHKP-------------TGWMYQERSL--------------------YNLGREKI 338 (591)
Q Consensus 292 ~~la~~~~~~G~~~~A~~~~~~aI~~~~~-------------~g~a~~~r~~--------------------y~~~~eA~ 338 (591)
..+|.++...|++++|+..+.+++...+. .|.+|...+. + ++|+
T Consensus 91 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~---~~A~ 167 (406)
T 3sf4_A 91 GNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDAL---QAAV 167 (406)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHH---HHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHH---HHHH
Confidence 78999999999999999999999876542 3555555555 5 8899
Q ss_pred HHHHHHHHc------CCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hH------HHHHHHHHHHHcCCHHHHH
Q 007721 339 VDLNYASEL------DPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VD------CLELRAWLFIAADDYESAL 405 (591)
Q Consensus 339 ~dl~~Ai~L------dP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~------~~~~r~~~~~~~g~~~~A~ 405 (591)
..|.+++++ .|..+.+|.++|.++..+|++++|+..+++++++.|. .. .+.++|.++..+|++++|+
T Consensus 168 ~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 247 (406)
T 3sf4_A 168 DFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETAS 247 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHH
Confidence 999999988 6667789999999999999999999999999999663 22 6778999999999999999
Q ss_pred HHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCC------chh
Q 007721 406 RDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGK------SFL 479 (591)
Q Consensus 406 ~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~------~~~ 479 (591)
..|++++++.|+.........+...++.+....+++++| +..+++++++.|.. +.+
T Consensus 248 ~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A------------------~~~~~~a~~~~~~~~~~~~~~~~ 309 (406)
T 3sf4_A 248 EYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKA------------------IDYHLKHLAIAQELNDRIGEGRA 309 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH------------------HHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHH------------------HHHHHHHHHHHHhcCCcHHHHHH
Confidence 999999999887633333333444555555555555555 78899999887665 668
Q ss_pred HhhhHHHHHHhCCHHHHHHHHHHHHhc------CCchHHHHHhHHHHHHHcCCHHH-HHHHHHHhhcccccHH
Q 007721 480 RFRQSLLLLRLNCQKAAMRCLRLARNH------SSSEHERLVYEGWILYDTGHREE-ALSRAEKSISIERTFE 545 (591)
Q Consensus 480 ~~~~g~~l~~l~~~~eA~~~~~~Al~l------~p~~~~a~~~~G~~l~~~g~~ee-Al~~~e~ai~l~~~~~ 545 (591)
+.++|.++..+|++++|+..+++|+++ .|....++..+|.++..+|+..+ +....++...++.+.+
T Consensus 310 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 382 (406)
T 3sf4_A 310 CWSLGNAYTALGNHDQAMHFAEKHLEISREVGDKSGELTARLNLSDLQMVLGLSYSTNNSIMSENTEIDSSLN 382 (406)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTSCC----------------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 45568899999999999998744 3334444444454433
No 62
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.84 E-value=3e-21 Score=169.71 Aligned_cols=98 Identities=17% Similarity=0.212 Sum_probs=89.4
Q ss_pred CCCCCCceEEEEcCeEEEhhHHHHhhcCHHHHHhhcCCCCCCCCceeEecCCCCCHHHHHHHHHHHhcCCCCCCChhHHH
Q 007721 50 SLEEDDSVTFCVRDKEISFVRNKIASLSSPFKAMLYGGFVESKRKTIDFSHDGVSVEGLRAVEVYTRTSRVDLFCPGIVL 129 (591)
Q Consensus 50 ~~~~~~~V~f~v~g~~~~aHr~iLaa~S~yF~amf~~~~~Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~~~~~~~~~v~ 129 (591)
.++..+||+|+|+|++|+|||.||+++|+||++||+++ ....|.|..+++++++|+.+|+|+|||++. ++.+++.
T Consensus 18 ~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~~i~l~~~~~~~~~f~~ll~~~Yt~~~~-~~~~~v~ 92 (116)
T 2vpk_A 18 EAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST----SENNVFLDQSQVKADGFQKLLEFIYTGTLN-LDSWNVK 92 (116)
T ss_dssp HHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC----CCSCEECCTTTCCHHHHHHHHHHHHHSCCC-CCTTTHH
T ss_pred hcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC----CCCeEEeecCCCCHHHHHHHHHHHcCCCcc-cCHHHHH
Confidence 45667789999999999999999999999999999988 356788822399999999999999999999 9999999
Q ss_pred HHHHHHhhhChHHHHHHHHHHHH
Q 007721 130 ELLSFANRFCCEEMKSACDAHLA 152 (591)
Q Consensus 130 ~lL~~A~~~~i~~L~~~C~~~L~ 152 (591)
+++.+|++|+++.|++.|++||.
T Consensus 93 ~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 93 EIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999999999999999999985
No 63
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.84 E-value=6.5e-20 Score=189.75 Aligned_cols=223 Identities=14% Similarity=0.153 Sum_probs=187.1
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCC----------HHHHHHHHHHHHhcCC-ChHHHHHHHHHHHHcC--CH
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQ----------IRAAISEIDRIIVFKL-SVDCLELRAWLFIAAD--DY 401 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~----------~~eAl~~~~~al~l~p-~~~~~~~r~~~~~~~g--~~ 401 (591)
++|+..+++++.+||++..+|++|+.++..+++ +++++..++++|..+| ++.+|+.|++++..+| ++
T Consensus 47 ~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~ 126 (331)
T 3dss_A 47 ESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNW 126 (331)
T ss_dssp HHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCH
T ss_pred HHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccH
Confidence 689999999999999999999999999999887 7899999999999999 4899999999999999 49
Q ss_pred HHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhcccccccc--chHHHHHHHHHcCCCCchh
Q 007721 402 ESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDI--GSLAVINQMLINDPGKSFL 479 (591)
Q Consensus 402 ~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~--~al~~~~~al~~~P~~~~~ 479 (591)
++++..++++++++|.+.. +...++-+ +...++. +++..++++|+.+|++..+
T Consensus 127 ~~EL~~~~k~l~~dprNy~------AW~~R~~v-------------------l~~l~~~~~eel~~~~~~I~~~p~N~SA 181 (331)
T 3dss_A 127 ARELELCARFLEADERNFH------CWDYRRFV-------------------AAQAAVAPAEELAFTDSLITRNFSNYSS 181 (331)
T ss_dssp HHHHHHHHHHHHHCTTCHH------HHHHHHHH-------------------HHHTTCCHHHHHHHHHHHHHHCSCCHHH
T ss_pred HHHHHHHHHHHHhCCCCHH------HHHHHHHH-------------------HHHhCcCHHHHHHHHHHHHHHCCCCHHH
Confidence 9999999999999998832 22222222 2222221 2588999999999999999
Q ss_pred HhhhHHHHHHh--------------CCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHc-----------CCHHHHHHHH
Q 007721 480 RFRQSLLLLRL--------------NCQKAAMRCLRLARNHSSSEHERLVYEGWILYDT-----------GHREEALSRA 534 (591)
Q Consensus 480 ~~~~g~~l~~l--------------~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~-----------g~~eeAl~~~ 534 (591)
|++++.++..+ +.++++++.+.+|+..+|+|..+.+|+.|++... +.++++++.+
T Consensus 182 W~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~~~~~~~~~~~~~~~l~~el~~~ 261 (331)
T 3dss_A 182 WHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGAGSGRCELSVEKSTVLQSELESC 261 (331)
T ss_dssp HHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHSSSCGGGCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCccccchHHHHHHHHHHHHH
Confidence 99999999998 5689999999999999999999999998888877 5689999999
Q ss_pred HHhhcccccHHHHHHHHHHhhhcCCCCCchh-HHHHHHHHHhcCCCCCcccc
Q 007721 535 EKSISIERTFEAFFLKAYILADTNLDPESST-YVIQLLEEALRCPSDGLRKG 585 (591)
Q Consensus 535 e~ai~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 585 (591)
++.+++.|++ ...+++.++-...+||.... .+.+.|+...+ =|-+|||
T Consensus 262 ~elle~~pd~-~w~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~--~Dp~r~~ 310 (331)
T 3dss_A 262 KELQELEPEN-KWCLLTIILLMRALDPLLYEKETLQYFSTLKA--VDPMRAA 310 (331)
T ss_dssp HHHHHHCTTC-HHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHH--HCGGGHH
T ss_pred HHHHhhCccc-chHHHHHHHHHHhhcccccHHHHHHHHHHHHH--hCcchhh
Confidence 9999999998 78899999887777765332 45556665543 4778877
No 64
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.84 E-value=1.7e-21 Score=176.24 Aligned_cols=102 Identities=13% Similarity=0.019 Sum_probs=89.1
Q ss_pred ccCCCCCCceEEEEcCeEEEhhHHHHhhcCHHHHHhhcCCCCCCCCceeEecCCCCCHHHHHHHHHHHhcCCCCCCChhH
Q 007721 48 CLSLEEDDSVTFCVRDKEISFVRNKIASLSSPFKAMLYGGFVESKRKTIDFSHDGVSVEGLRAVEVYTRTSRVDLFCPGI 127 (591)
Q Consensus 48 ~~~~~~~~~V~f~v~g~~~~aHr~iLaa~S~yF~amf~~~~~Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~~~~~~~~~ 127 (591)
...++..+||+|+|+|++|+|||.||+++|+||++||.+++ ..+|+| +++++++|+.+|+|+|||++. ++.++
T Consensus 19 l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~----~~~i~l--~~~~~~~f~~lL~fiYtg~~~-i~~~~ 91 (135)
T 2yy9_A 19 QREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT----GGSVVL--PAGFAEIFGLLLDFFYTGHLA-LTSGN 91 (135)
T ss_dssp HHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC--------CCEEE--CGGGHHHHHHHHHHHHHSCCC-CCTTT
T ss_pred HHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC----CCeEEe--CCCCHHHHHHHHHHHhCCCCC-CCHHH
Confidence 34566777899999999999999999999999999999987 568999 999999999999999999999 99999
Q ss_pred HHHHHHHHhhhChHHHHHHHHHHHHhhcC
Q 007721 128 VLELLSFANRFCCEEMKSACDAHLASLVG 156 (591)
Q Consensus 128 v~~lL~~A~~~~i~~L~~~C~~~L~~~i~ 156 (591)
+.+|+.+|++|+++.|++.|++||.+.+.
T Consensus 92 v~~ll~~A~~l~i~~L~~~C~~~l~~~l~ 120 (135)
T 2yy9_A 92 RDQVLLAAKELRVPEAVELCQSFQPQTSV 120 (135)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHCCC----
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999988776
No 65
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.83 E-value=3.2e-20 Score=211.96 Aligned_cols=155 Identities=12% Similarity=0.057 Sum_probs=132.6
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLA 413 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~ 413 (591)
++|+..|++|++++|+++.+|.++|.+|.++|++++|++.|++||+++|+ +++++++|.++..+|++++|+..|++|++
T Consensus 26 ~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~ 105 (723)
T 4gyw_A 26 EEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQ 105 (723)
T ss_dssp HHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 67777888899999999999999999999999999999999999999996 78888899999999999999999999999
Q ss_pred cCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCH
Q 007721 414 LESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQ 493 (591)
Q Consensus 414 l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~ 493 (591)
++|++. .+...++.+.....++++| +..|++||+++|+++.+++++|.++..+|++
T Consensus 106 l~P~~~------~a~~~Lg~~~~~~g~~~eA------------------i~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~ 161 (723)
T 4gyw_A 106 INPAFA------DAHSNLASIHKDSGNIPEA------------------IASYRTALKLKPDFPDAYCNLAHCLQIVCDW 161 (723)
T ss_dssp HCTTCH------HHHHHHHHHHHHTTCHHHH------------------HHHHHHHHHHCSCCHHHHHHHHHHHHHTTCC
T ss_pred hCCCCH------HHHHHHHHHHHHcCCHHHH------------------HHHHHHHHHhCCCChHHHhhhhhHHHhcccH
Confidence 999883 3444444444445555555 8889999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCchHHH
Q 007721 494 KAAMRCLRLARNHSSSEHER 513 (591)
Q Consensus 494 ~eA~~~~~~Al~l~p~~~~a 513 (591)
++|++.+++++++.|+..+.
T Consensus 162 ~~A~~~~~kal~l~~~~~~~ 181 (723)
T 4gyw_A 162 TDYDERMKKLVSIVADQLEK 181 (723)
T ss_dssp TTHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhChhHHhh
Confidence 99999999999999987654
No 66
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.83 E-value=2.7e-20 Score=212.17 Aligned_cols=189 Identities=11% Similarity=-0.047 Sum_probs=154.4
Q ss_pred hcCCCHHHHHHHH-hcCCcHHHHHHHHHHH--------HcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hH
Q 007721 317 EHKPTGWMYQERS-LYNLGREKIVDLNYAS--------ELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VD 386 (591)
Q Consensus 317 ~~~~~g~a~~~r~-~y~~~~eA~~dl~~Ai--------~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~ 386 (591)
.+|+...++...+ ..+..++|++.|++++ +.+|+++.+|.++|.++.++|++++|+..|+++++++|+ +.
T Consensus 389 ~~p~~~~a~~~~a~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~ 468 (681)
T 2pzi_A 389 VDPTDVAASVLQATVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWR 468 (681)
T ss_dssp CCTTSTTHHHHHHTTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHH
T ss_pred CCCCCcchHHhhcccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHH
Confidence 3455555555544 2334489999999999 999999999999999999999999999999999999995 78
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHH
Q 007721 387 CLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVI 466 (591)
Q Consensus 387 ~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~ 466 (591)
+++++|.++..+|++++|+.+|++|++++|++.. +...++.+....+++++ +..|
T Consensus 469 a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~------~~~~lg~~~~~~g~~~~-------------------~~~~ 523 (681)
T 2pzi_A 469 LVWYRAVAELLTGDYDSATKHFTEVLDTFPGELA------PKLALAATAELAGNTDE-------------------HKFY 523 (681)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSH------HHHHHHHHHHHHTCCCT-------------------TCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH------HHHHHHHHHHHcCChHH-------------------HHHH
Confidence 8999999999999999999999999999999843 33344433333333333 3478
Q ss_pred HHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHH
Q 007721 467 NQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEA 530 (591)
Q Consensus 467 ~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeA 530 (591)
+++++++|+++.+|+++|.++.++|++++|+..|++|++++|+++++++++|.+++..|+.+++
T Consensus 524 ~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~~~~~~~~~~ 587 (681)
T 2pzi_A 524 QTVWSTNDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTLLSGRSTSEV 587 (681)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHTC-------C
T ss_pred HHHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHHHHccCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999887763333
No 67
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.83 E-value=6.6e-19 Score=168.51 Aligned_cols=188 Identities=11% Similarity=0.001 Sum_probs=153.2
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHc-CCHHHHHHHHHHHH
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAA-DDYESALRDTLALL 412 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~-g~~~~A~~d~~~al 412 (591)
++|+..|+++++++|+++.+|..+|.++..+|++++|+..|+++++++|+ ...+..+|.++... |++++|+..|++++
T Consensus 25 ~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~ 104 (225)
T 2vq2_A 25 RQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKAL 104 (225)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 66777777888888888888888888888888888888888888888885 67777788888888 88888888888888
Q ss_pred h--cCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHh
Q 007721 413 A--LESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRL 490 (591)
Q Consensus 413 ~--l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l 490 (591)
+ .+|+. ..+....+.+....+++++| +..++++++.+|.++.+++.+|.++..+
T Consensus 105 ~~~~~~~~------~~~~~~l~~~~~~~~~~~~A------------------~~~~~~~~~~~~~~~~~~~~la~~~~~~ 160 (225)
T 2vq2_A 105 ADPTYPTP------YIANLNKGICSAKQGQFGLA------------------EAYLKRSLAAQPQFPPAFKELARTKMLA 160 (225)
T ss_dssp TSTTCSCH------HHHHHHHHHHHHHTTCHHHH------------------HHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred cCcCCcch------HHHHHHHHHHHHHcCCHHHH------------------HHHHHHHHHhCCCCchHHHHHHHHHHHc
Confidence 8 34433 22333333333344444444 7788888888888889999999999999
Q ss_pred CCHHHHHHHHHHHHhcCC-chHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHHH
Q 007721 491 NCQKAAMRCLRLARNHSS-SEHERLVYEGWILYDTGHREEALSRAEKSISIERTFEA 546 (591)
Q Consensus 491 ~~~~eA~~~~~~Al~l~p-~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~~ 546 (591)
|++++|+..+++++++.| ++..++...+.++...|+.++|...+++++.+.|+...
T Consensus 161 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~p~~~~ 217 (225)
T 2vq2_A 161 GQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQANFPYSEE 217 (225)
T ss_dssp TCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCHH
Confidence 999999999999999999 99999999999999999999999999999999998773
No 68
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.83 E-value=4.4e-20 Score=210.39 Aligned_cols=183 Identities=13% Similarity=-0.001 Sum_probs=166.9
Q ss_pred HcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHH--------hcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Q 007721 346 ELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRII--------VFKLS-VDCLELRAWLFIAADDYESALRDTLALLALES 416 (591)
Q Consensus 346 ~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al--------~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P 416 (591)
.++|+++.+++..| ...|++++|++.|++++ +.+|+ ...+..+|.++..+|++++|+..|+++++++|
T Consensus 388 ~~~p~~~~a~~~~a---~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p 464 (681)
T 2pzi_A 388 LVDPTDVAASVLQA---TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVG 464 (681)
T ss_dssp CCCTTSTTHHHHHH---TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred cCCCCCcchHHhhc---ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCc
Confidence 67999999999888 88999999999999999 99996 78889999999999999999999999999999
Q ss_pred cchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHH
Q 007721 417 NYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAA 496 (591)
Q Consensus 417 ~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA 496 (591)
++ ..+...++.+....+++++| +..|+++++++|+++.+|+++|.++.++|++++
T Consensus 465 ~~------~~a~~~lg~~~~~~g~~~~A------------------~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~- 519 (681)
T 2pzi_A 465 WR------WRLVWYRAVAELLTGDYDSA------------------TKHFTEVLDTFPGELAPKLALAATAELAGNTDE- 519 (681)
T ss_dssp CC------HHHHHHHHHHHHHHTCHHHH------------------HHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-
T ss_pred ch------HHHHHHHHHHHHHcCCHHHH------------------HHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-
Confidence 98 34555566555666666666 889999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH-HHHHHHHHhhh
Q 007721 497 MRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFE-AFFLKAYILAD 556 (591)
Q Consensus 497 ~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~-~~~~~~~~~~~ 556 (591)
+..|++|++++|+++++++++|.++..+|++++|++.|++|++++|++. |++++|.++..
T Consensus 520 ~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~~~ 580 (681)
T 2pzi_A 520 HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTLLS 580 (681)
T ss_dssp TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999999987 99999999743
No 69
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.82 E-value=9.9e-20 Score=185.30 Aligned_cols=227 Identities=11% Similarity=-0.016 Sum_probs=152.3
Q ss_pred cHHHHHHHHHHHhhccccchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcCCcHHHHHHHHHHHHcCCC
Q 007721 271 EYKDACYYFEAAADAGHIYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLYNLGREKIVDLNYASELDPT 350 (591)
Q Consensus 271 ~~~eA~~~f~~Al~~~~~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~~~~eA~~dl~~Ai~LdP~ 350 (591)
++++|...|++| |.++..+|++++|+..|.+++...+..+. .+.
T Consensus 32 ~~~~A~~~~~~a------------~~~~~~~g~~~~A~~~~~~al~~~~~~~~------------------------~~~ 75 (292)
T 1qqe_A 32 KFEEAADLCVQA------------ATIYRLRKELNLAGDSFLKAADYQKKAGN------------------------EDE 75 (292)
T ss_dssp HHHHHHHHHHHH------------HHHHHHTTCTHHHHHHHHHHHHHHHHTTC------------------------HHH
T ss_pred cHHHHHHHHHHH------------HHHHHHcCCHHHHHHHHHHHHHHHHHhCC------------------------HHH
Confidence 477777777665 33455566665555555555544321100 011
Q ss_pred ChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-------hHHHHHHHHHHHHc-CCHHHHHHHHHHHHhcCCcchhhh
Q 007721 351 LSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-------VDCLELRAWLFIAA-DDYESALRDTLALLALESNYMMFH 422 (591)
Q Consensus 351 ~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-------~~~~~~r~~~~~~~-g~~~~A~~d~~~al~l~P~~~~~~ 422 (591)
.+.+|.++|.++..+|++++|+..|++||++.|. ...+.++|.++... |++++|+..|++|+++.|+...-.
T Consensus 76 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~ 155 (292)
T 1qqe_A 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVA 155 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChH
Confidence 2567788888888888888888888888888763 23456778888885 888888888888888888542111
Q ss_pred hhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCch-------hHhhhHHHHHHhCCHHH
Q 007721 423 GRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSF-------LRFRQSLLLLRLNCQKA 495 (591)
Q Consensus 423 ~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~-------~~~~~g~~l~~l~~~~e 495 (591)
....+...++.+....+++++| +..++++++++|.++. +++++|.++..+|++++
T Consensus 156 ~~~~~~~~lg~~~~~~g~~~~A------------------~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~ 217 (292)
T 1qqe_A 156 LSNKCFIKCADLKALDGQYIEA------------------SDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVA 217 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHH------------------HHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHH------------------HHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHH
Confidence 1112333334344444444444 7888888888887765 57899999999999999
Q ss_pred HHHHHHHHHhcCCchHHHH-----HhHHHHHH--HcCCHHHHHHHHHHhhcccccHHHHHHHH
Q 007721 496 AMRCLRLARNHSSSEHERL-----VYEGWILY--DTGHREEALSRAEKSISIERTFEAFFLKA 551 (591)
Q Consensus 496 A~~~~~~Al~l~p~~~~a~-----~~~G~~l~--~~g~~eeAl~~~e~ai~l~~~~~~~~~~~ 551 (591)
|+..|+++++++|+...+. ..++..+- +.+++++|+..|++++.++|...-..+|.
T Consensus 218 A~~~~~~al~l~p~~~~~~~~~~l~~l~~~~~~~~~~~~~~A~~~~~~~~~l~~~~~~~~~~~ 280 (292)
T 1qqe_A 218 AARTLQEGQSEDPNFADSRESNFLKSLIDAVNEGDSEQLSEHCKEFDNFMRLDKWKITILNKI 280 (292)
T ss_dssp HHHHHHGGGCC---------HHHHHHHHHHHHTTCTTTHHHHHHHHTTSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCccHHHHHHHHHHH
Confidence 9999999999999987653 33444433 56889999999999999999998776665
No 70
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.82 E-value=6.9e-19 Score=180.70 Aligned_cols=234 Identities=9% Similarity=-0.077 Sum_probs=183.4
Q ss_pred HhCCh-HHHHHHHHHHHHhcCCCHHHHHHHHh----cC--CcHHHHHHHHHHHHcCCCChHHHHhHHHHH----HHh---
Q 007721 300 KVGQQ-YSAYKLINSIISEHKPTGWMYQERSL----YN--LGREKIVDLNYASELDPTLSFPYKYRAVAK----MEE--- 365 (591)
Q Consensus 300 ~~G~~-~~A~~~~~~aI~~~~~~g~a~~~r~~----y~--~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l----~~l--- 365 (591)
..|.+ ++|+..+.++|..+|++..++..|+. .+ ..++++..+++++..+|++..+|++|+.++ ..+
T Consensus 44 ~~~e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~ 123 (306)
T 3dra_A 44 KAEEYSERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNND 123 (306)
T ss_dssp HTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTC
T ss_pred HcCCCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhcccc
Confidence 33443 46777777777777777777777753 22 448899999999999999999999999999 667
Q ss_pred CCHHHHHHHHHHHHhcCC-ChHHHHHHHHHHHHcCCHH--HHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccC
Q 007721 366 GQIRAAISEIDRIIVFKL-SVDCLELRAWLFIAADDYE--SALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWS 442 (591)
Q Consensus 366 ~~~~eAl~~~~~al~l~p-~~~~~~~r~~~~~~~g~~~--~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~ 442 (591)
++++++++.++++|+.+| ++.+|+.|++++..+|+++ +++..++++++++|.+. .|.+.++.+........
T Consensus 124 ~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~------sAW~~R~~ll~~l~~~~ 197 (306)
T 3dra_A 124 FDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNN------SAWSHRFFLLFSKKHLA 197 (306)
T ss_dssp CCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCH------HHHHHHHHHHHSSGGGC
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHhccccc
Confidence 789999999999999999 5889999999999999998 99999999999999873 34443433333322200
Q ss_pred chhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHH-HHHHHHHHHhcC---CchHHHHHhHH
Q 007721 443 PADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKA-AMRCLRLARNHS---SSEHERLVYEG 518 (591)
Q Consensus 443 ~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~e-A~~~~~~Al~l~---p~~~~a~~~~G 518 (591)
.. .+ -.+++..++++|..+|++..+|+.++.++.++|+..+ ....+.+++.++ |.+..|+..++
T Consensus 198 ~~----~~--------~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~s~~al~~la 265 (306)
T 3dra_A 198 TD----NT--------IDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRSITQLEEFSLQFVDLEKDQVTSSFALETLA 265 (306)
T ss_dssp CH----HH--------HHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCCGGGGHHHHHTTEEGGGTEESCHHHHHHHH
T ss_pred hh----hh--------HHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCCChHHHHHHHHHHHhccCCCCCCHHHHHHHH
Confidence 00 00 0115889999999999999999999999999999666 445777778777 88999999999
Q ss_pred HHHHHcCCHHHHHHHHHHhhc-ccccHH-HHHHHH
Q 007721 519 WILYDTGHREEALSRAEKSIS-IERTFE-AFFLKA 551 (591)
Q Consensus 519 ~~l~~~g~~eeAl~~~e~ai~-l~~~~~-~~~~~~ 551 (591)
-++..+|+.++|+..|++++. ++|--. .+..|+
T Consensus 266 ~~~~~~~~~~~A~~~~~~l~~~~Dpir~~yW~~~~ 300 (306)
T 3dra_A 266 KIYTQQKKYNESRTVYDLLKSKYNPIRSNFWDYQI 300 (306)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred HHHHccCCHHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 999999999999999999996 899877 444444
No 71
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.82 E-value=5.5e-19 Score=180.96 Aligned_cols=220 Identities=8% Similarity=-0.031 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHH-------hCCH-------HHHHHHHHHHHh-cCCC-hHHHHHHHHHHHHc
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKME-------EGQI-------RAAISEIDRIIV-FKLS-VDCLELRAWLFIAA 398 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~-------l~~~-------~eAl~~~~~al~-l~p~-~~~~~~r~~~~~~~ 398 (591)
.+|+..|++|++.+|+++.+|.++|..+.. +|++ ++|+..|++||+ ++|+ ...|...|.++...
T Consensus 33 ~~a~~~~~~al~~~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~ 112 (308)
T 2ond_A 33 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESR 112 (308)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhc
Confidence 578889999999999999999999999874 5886 999999999999 7996 67888999999999
Q ss_pred CCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCch
Q 007721 399 DDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSF 478 (591)
Q Consensus 399 g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~ 478 (591)
|++++|+..|+++++++|++.. .+....+.+....+++++ |..+|++|++.+|.+..
T Consensus 113 ~~~~~A~~~~~~al~~~p~~~~-----~~~~~~~~~~~~~~~~~~------------------A~~~~~~a~~~~p~~~~ 169 (308)
T 2ond_A 113 MKYEKVHSIYNRLLAIEDIDPT-----LVYIQYMKFARRAEGIKS------------------GRMIFKKAREDARTRHH 169 (308)
T ss_dssp TCHHHHHHHHHHHHTSSSSCTH-----HHHHHHHHHHHHHHCHHH------------------HHHHHHHHHTSTTCCTH
T ss_pred CCHHHHHHHHHHHHhccccCcc-----HHHHHHHHHHHHhcCHHH------------------HHHHHHHHHhcCCCCHH
Confidence 9999999999999999998732 023333333333334443 48899999999999999
Q ss_pred hHhhhHHHHHH-hCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcc---ccc-HHHHHHHHHH
Q 007721 479 LRFRQSLLLLR-LNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISI---ERT-FEAFFLKAYI 553 (591)
Q Consensus 479 ~~~~~g~~l~~-l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l---~~~-~~~~~~~~~~ 553 (591)
+|...+..... +|++++|+..|++|++++|++++++.++|..+..+|++++|...|++|++. .|+ ...++.+-..
T Consensus 170 ~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~ 249 (308)
T 2ond_A 170 VYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLA 249 (308)
T ss_dssp HHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHH
Confidence 98876666444 799999999999999999999999999999999999999999999999995 664 4444333222
Q ss_pred hhhcCCCCCchhHHHHHHHHHhc-CCCC
Q 007721 554 LADTNLDPESSTYVIQLLEEALR-CPSD 580 (591)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 580 (591)
+.... ..-..+..+++.|++ +|.+
T Consensus 250 ~~~~~---g~~~~a~~~~~~a~~~~p~~ 274 (308)
T 2ond_A 250 FESNI---GDLASILKVEKRRFTAFREE 274 (308)
T ss_dssp HHHHH---SCHHHHHHHHHHHHHHTTTT
T ss_pred HHHHc---CCHHHHHHHHHHHHHHcccc
Confidence 22222 234567788888886 7864
No 72
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.82 E-value=1.7e-17 Score=180.97 Aligned_cols=318 Identities=12% Similarity=-0.036 Sum_probs=210.7
Q ss_pred chhHHHHHHHHhhcchhhhHHHHHHHHhhhHHhh----hccHHHHHHHHHHHhhccccchhhhhHHHHHH----hCChHH
Q 007721 235 SNTTVMLLERLGECSTERWQRMLALHQLGCVMFE----REEYKDACYYFEAAADAGHIYSLAGLARAKYK----VGQQYS 306 (591)
Q Consensus 235 ~~~~v~lLe~~~~~~~~~~~~~~a~~~lG~~~~~----~g~~~eA~~~f~~Al~~~~~~a~~~la~~~~~----~G~~~~ 306 (591)
.+.++.+++++.+. ....+++.+|..+.. .+++++|+.+|++|++.++..++..+|.++.. .++++.
T Consensus 59 ~~~A~~~~~~a~~~-----~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~ 133 (490)
T 2xm6_A 59 LTQAMDWFRRAAEQ-----GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKGLPQAQQNLGVMYHEGNGVKVDKAE 133 (490)
T ss_dssp HHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHH
T ss_pred HHHHHHHHHHHHHC-----CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHH
Confidence 44566666665432 124567777777777 77788888888887777777777777777776 677777
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHh--------cCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHH----hCCHHHHHHH
Q 007721 307 AYKLINSIISEHKPTGWMYQERSL--------YNLGREKIVDLNYASELDPTLSFPYKYRAVAKME----EGQIRAAISE 374 (591)
Q Consensus 307 A~~~~~~aI~~~~~~g~a~~~r~~--------y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~----l~~~~eAl~~ 374 (591)
|+..|.+++... .+.++.+.+. -...++|+..|++|.+. .++.++.++|.+|.. .+++++|+..
T Consensus 134 A~~~~~~a~~~~--~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~ 209 (490)
T 2xm6_A 134 SVKWFRLAAEQG--RDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ--GNVWSCNQLGYMYSRGLGVERNDAISAQW 209 (490)
T ss_dssp HHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHH
T ss_pred HHHHHHHHHHCC--CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHhcCCCCCcCHHHHHHH
Confidence 888888776653 2333333321 11226777778777765 567778888888877 7778888888
Q ss_pred HHHHHhcCCChHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhh----hcccCch--
Q 007721 375 IDRIIVFKLSVDCLELRAWLFIA----ADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHH----VRSWSPA-- 444 (591)
Q Consensus 375 ~~~al~l~p~~~~~~~r~~~~~~----~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~----~~~~~~a-- 444 (591)
|+++++.. ++.+++.+|.++.. .+++++|+..|+++++..+... ...++.+... .+++++|
T Consensus 210 ~~~a~~~~-~~~a~~~lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a--------~~~lg~~y~~g~~~~~d~~~A~~ 280 (490)
T 2xm6_A 210 YRKSATSG-DELGQLHLADMYYFGIGVTQDYTQSRVLFSQSAEQGNSIA--------QFRLGYILEQGLAGAKEPLKALE 280 (490)
T ss_dssp HHHHHHTT-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHTTTCHHH--------HHHHHHHHHHTTTSSCCHHHHHH
T ss_pred HHHHHHCC-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHH--------HHHHHHHHHCCCCCCCCHHHHHH
Confidence 88877542 45666677777775 7778888888888777654321 1112211111 1222222
Q ss_pred -----------hhhhhhhhccccc-----cccc-hHHHHHHHHHcCCCCchhHhhhHHHHHHhC---CHHHHHHHHHHHH
Q 007721 445 -----------DCWIKLYDRWSSV-----DDIG-SLAVINQMLINDPGKSFLRFRQSLLLLRLN---CQKAAMRCLRLAR 504 (591)
Q Consensus 445 -----------~~~~~l~~~~~~~-----~~~~-al~~~~~al~~~P~~~~~~~~~g~~l~~l~---~~~eA~~~~~~Al 504 (591)
+++..+....... .+.. |+..++++++. +++.+++++|.++...| ++++|++.|++|+
T Consensus 281 ~~~~a~~~~~~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~ 358 (490)
T 2xm6_A 281 WYRKSAEQGNSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQ--GDATAQANLGAIYFRLGSEEEHKKAVEWFRKAA 358 (490)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhc--CCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHH
Confidence 2222333222222 3444 78888888876 56788899999988866 7888999999998
Q ss_pred hcCCchHHHHHhHHHHHHH----cCCHHHHHHHHHHhhcccccHHHHHHHHHHhhhcCCCCCchhHHHHHHHHHh
Q 007721 505 NHSSSEHERLVYEGWILYD----TGHREEALSRAEKSISIERTFEAFFLKAYILADTNLDPESSTYVIQLLEEAL 575 (591)
Q Consensus 505 ~l~p~~~~a~~~~G~~l~~----~g~~eeAl~~~e~ai~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (591)
+. .++++++++|++++. .+++++|+..|++|++.. +..+++..|..+..-.--+..-..-+..++.|+
T Consensus 359 ~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~-~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~ 430 (490)
T 2xm6_A 359 AK--GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG-LSAAQVQLGEIYYYGLGVERDYVQAWAWFDTAS 430 (490)
T ss_dssp HT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHH
T ss_pred HC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 87 578899999999988 889999999999998875 455888888888763212333344555556555
No 73
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.82 E-value=1.3e-21 Score=174.23 Aligned_cols=100 Identities=18% Similarity=0.198 Sum_probs=89.0
Q ss_pred ccCCCCCCceEEEEcCeEEEhhHHHHhhcCHHHHHhhcCCCCCCCCceeEecCC-CCCHHHHHHHHHHHhcCCCCCCChh
Q 007721 48 CLSLEEDDSVTFCVRDKEISFVRNKIASLSSPFKAMLYGGFVESKRKTIDFSHD-GVSVEGLRAVEVYTRTSRVDLFCPG 126 (591)
Q Consensus 48 ~~~~~~~~~V~f~v~g~~~~aHr~iLaa~S~yF~amf~~~~~Es~~~~I~l~~~-~vs~~~~~~ll~ylYtg~~~~~~~~ 126 (591)
...++..+||+|+|+|++|+|||.||+++|+||++||++++.|+ .+|.+ + ++++++|+.+|+|+|||++. ++.+
T Consensus 23 l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~--~~i~l--~~~v~~~~f~~lL~~iYtg~~~-i~~~ 97 (124)
T 2ihc_A 23 QRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE--LNITL--PEEVTVKGFEPLIQFAYTAKLI-LSKE 97 (124)
T ss_dssp HHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---C--EEEEC--CTTSCHHHHHHHHHHHHHSEEE-EETT
T ss_pred HHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCC--ceEee--cCCcCHHHHHHHHHHhcCCCcc-cCHH
Confidence 34556777899999999999999999999999999999999875 47888 5 89999999999999999999 9999
Q ss_pred HHHHHHHHHhhhChHHHHHHHHHHHH
Q 007721 127 IVLELLSFANRFCCEEMKSACDAHLA 152 (591)
Q Consensus 127 ~v~~lL~~A~~~~i~~L~~~C~~~L~ 152 (591)
++.+|+.+|++|+++.|++.|++||.
T Consensus 98 ~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 98 NVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp THHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 99999999999999999999999875
No 74
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.82 E-value=2.2e-17 Score=179.94 Aligned_cols=266 Identities=12% Similarity=0.028 Sum_probs=151.4
Q ss_pred HHHHhhhHHhh----hccHHHHHHHHHHHhhccccchhhhhHHHHHH----hCChHHHHHHHHHHHHhcCCCHHHHHHHH
Q 007721 258 ALHQLGCVMFE----REEYKDACYYFEAAADAGHIYSLAGLARAKYK----VGQQYSAYKLINSIISEHKPTGWMYQERS 329 (591)
Q Consensus 258 a~~~lG~~~~~----~g~~~eA~~~f~~Al~~~~~~a~~~la~~~~~----~G~~~~A~~~~~~aI~~~~~~g~a~~~r~ 329 (591)
+++++|.++.. .+++++|+.+|++|++.++..++..+|.++.. .++++.|+..|.+++.... ..++...+
T Consensus 149 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~--~~a~~~lg 226 (490)
T 2xm6_A 149 GQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQGNVWSCNQLGYMYSRGLGVERNDAISAQWYRKSATSGD--ELGQLHLA 226 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC--HHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHCCC--HHHHHHHH
Confidence 44444444444 44445555555555444444444444444444 4444555555555444322 11111111
Q ss_pred h--------cCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHH----hCCHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 007721 330 L--------YNLGREKIVDLNYASELDPTLSFPYKYRAVAKME----EGQIRAAISEIDRIIVFKLSVDCLELRAWLFIA 397 (591)
Q Consensus 330 ~--------y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~----l~~~~eAl~~~~~al~l~p~~~~~~~r~~~~~~ 397 (591)
. ....++|+..|+++.+. .++.+++++|.++.. .+++++|+..|+++++.. ++++++.+|.++..
T Consensus 227 ~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~g~~~~~d~~~A~~~~~~a~~~~-~~~a~~~Lg~~y~~ 303 (490)
T 2xm6_A 227 DMYYFGIGVTQDYTQSRVLFSQSAEQ--GNSIAQFRLGYILEQGLAGAKEPLKALEWYRKSAEQG-NSDGQYYLAHLYDK 303 (490)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHTTT-CHHHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHc
Confidence 1 01114445555554443 334455555555554 455555555555554321 23444444544444
Q ss_pred c-----CCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccc-hHHHHHHHHH
Q 007721 398 A-----DDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIG-SLAVINQMLI 471 (591)
Q Consensus 398 ~-----g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~-al~~~~~al~ 471 (591)
. +|+++|+..|+++++.++. .+...++.+... .....+.. |+..++++++
T Consensus 304 ~~~g~~~~~~~A~~~~~~a~~~~~~--------~a~~~lg~~y~~----------------~g~~~~~~~A~~~~~~a~~ 359 (490)
T 2xm6_A 304 GAEGVAKNREQAISWYTKSAEQGDA--------TAQANLGAIYFR----------------LGSEEEHKKAVEWFRKAAA 359 (490)
T ss_dssp CBTTBCCCHHHHHHHHHHHHHTTCH--------HHHHHHHHHHHH----------------SCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHHHhcCCH--------HHHHHHHHHHHh----------------CCCcccHHHHHHHHHHHHH
Confidence 4 4555555555555544321 122222221111 10011333 7889999998
Q ss_pred cCCCCchhHhhhHHHHHH----hCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHH----cCCHHHHHHHHHHhhccccc
Q 007721 472 NDPGKSFLRFRQSLLLLR----LNCQKAAMRCLRLARNHSSSEHERLVYEGWILYD----TGHREEALSRAEKSISIERT 543 (591)
Q Consensus 472 ~~P~~~~~~~~~g~~l~~----l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~----~g~~eeAl~~~e~ai~l~~~ 543 (591)
. +++.+++++|.++.. .+++++|+..|++|++.. ++++++++|++++. .|++++|+..|++|+++.|+
T Consensus 360 ~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~ 435 (490)
T 2xm6_A 360 K--GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMN 435 (490)
T ss_dssp T--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCC
T ss_pred C--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCC
Confidence 7 789999999999999 899999999999999975 68999999999999 89999999999999999976
Q ss_pred HHHHHHHHHHhhh
Q 007721 544 FEAFFLKAYILAD 556 (591)
Q Consensus 544 ~~~~~~~~~~~~~ 556 (591)
....-.--+.|+.
T Consensus 436 ~~~~~~a~~~l~~ 448 (490)
T 2xm6_A 436 LFGTENRNITEKK 448 (490)
T ss_dssp HHHHHHHHHHHTT
T ss_pred CcCCHHHHHHHHh
Confidence 4322233334444
No 75
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.82 E-value=1.6e-19 Score=174.37 Aligned_cols=172 Identities=15% Similarity=0.018 Sum_probs=132.1
Q ss_pred ChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHH----------------HHHHHHHcCCHHHHHHHHHHHHh
Q 007721 351 LSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLEL----------------RAWLFIAADDYESALRDTLALLA 413 (591)
Q Consensus 351 ~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~----------------r~~~~~~~g~~~~A~~d~~~al~ 413 (591)
.+..+..+|..++..|++++|+..|+++++++|+ +..++. +|.++..+|++++|+..|+++++
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 82 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ 82 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4566777888888888888888888888888885 666777 78888888888888888888888
Q ss_pred cCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCC-
Q 007721 414 LESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNC- 492 (591)
Q Consensus 414 l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~- 492 (591)
++|++. .+...++.+....+++++| +..|+++++++|+++.+|+++|.++..+|.
T Consensus 83 ~~p~~~------~~~~~lg~~~~~~g~~~~A------------------~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~ 138 (208)
T 3urz_A 83 KAPNNV------DCLEACAEMQVCRGQEKDA------------------LRMYEKILQLEADNLAANIFLGNYYYLTAEQ 138 (208)
T ss_dssp HCTTCH------HHHHHHHHHHHHHTCHHHH------------------HHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HCCCCH------HHHHHHHHHHHHcCCHHHH------------------HHHHHHHHHcCCCCHHHHHHHHHHHHHHhHH
Confidence 888773 3334444444444444444 778888888888889999999999987765
Q ss_pred -HHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHHHH
Q 007721 493 -QKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFEAF 547 (591)
Q Consensus 493 -~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~~~ 547 (591)
.++|...+++++...|. ..+++++|.+++.+|++++|+..|++|++++|+.++-
T Consensus 139 ~~~~~~~~~~~~~~~~~~-~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~~~ 193 (208)
T 3urz_A 139 EKKKLETDYKKLSSPTKM-QYARYRDGLSKLFTTRYEKARNSLQKVILRFPSTEAQ 193 (208)
T ss_dssp HHHHHHHHHC---CCCHH-HHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCHHHH
T ss_pred HHHHHHHHHHHHhCCCch-hHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHHHH
Confidence 45678888888765554 4588999999999999999999999999999998843
No 76
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.82 E-value=7e-21 Score=168.25 Aligned_cols=95 Identities=21% Similarity=0.286 Sum_probs=88.4
Q ss_pred CCCCCCceEEEEcCeEEEhhHHHHhhcCHHHHHhhcCCCCCCCCceeEecCCCCCHHHHHHHHHHHhcCCCCCCChhHHH
Q 007721 50 SLEEDDSVTFCVRDKEISFVRNKIASLSSPFKAMLYGGFVESKRKTIDFSHDGVSVEGLRAVEVYTRTSRVDLFCPGIVL 129 (591)
Q Consensus 50 ~~~~~~~V~f~v~g~~~~aHr~iLaa~S~yF~amf~~~~~Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~~~~~~~~~v~ 129 (591)
.++..+||+|+|+|+.|+|||.||+++|+||++||+++ ..+|.+ +++++++|+.+|+|+|||++. ++.+++.
T Consensus 23 ~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~-----~~~i~l--~~~~~~~f~~ll~~~Ytg~~~-i~~~~~~ 94 (119)
T 2q81_A 23 QLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ-----KDVVHL--DISNAAGLGQVLEFMYTAKLS-LSPENVD 94 (119)
T ss_dssp HHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC-----CSGGGG--GGCCHHHHHHHHHHHHHSCCC-CCTTTHH
T ss_pred hcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEe--CCCCHHHHHHHHHHHcCCCCc-cCHHHHH
Confidence 45677789999999999999999999999999999873 457888 889999999999999999999 9999999
Q ss_pred HHHHHHhhhChHHHHHHHHHHHH
Q 007721 130 ELLSFANRFCCEEMKSACDAHLA 152 (591)
Q Consensus 130 ~lL~~A~~~~i~~L~~~C~~~L~ 152 (591)
+++.+|++|+++.|++.|++||.
T Consensus 95 ~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 95 DVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999999999999999999985
No 77
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.82 E-value=1.3e-19 Score=191.13 Aligned_cols=265 Identities=10% Similarity=-0.049 Sum_probs=214.4
Q ss_pred hhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCH----HHHHHHHh----cCCcHHHHHHHHHHHHc------CCCChHHH
Q 007721 290 SLAGLARAKYKVGQQYSAYKLINSIISEHKPTG----WMYQERSL----YNLGREKIVDLNYASEL------DPTLSFPY 355 (591)
Q Consensus 290 a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g----~a~~~r~~----y~~~~eA~~dl~~Ai~L------dP~~~~ay 355 (591)
.+..+|..+...|++++|+..+.+++...|+.. .++...+. .+..++|+..|++++++ +|..+.+|
T Consensus 50 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 129 (411)
T 4a1s_A 50 ELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSS 129 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHH
Confidence 344678889999999999999999999988754 45555543 23449999999999999 79999999
Q ss_pred HhHHHHHHHhCCHHHHHHHHHHHHhc------CCC-hHHHHHHHHHHHHcCC-----------------HHHHHHHHHHH
Q 007721 356 KYRAVAKMEEGQIRAAISEIDRIIVF------KLS-VDCLELRAWLFIAADD-----------------YESALRDTLAL 411 (591)
Q Consensus 356 ~~rg~~l~~l~~~~eAl~~~~~al~l------~p~-~~~~~~r~~~~~~~g~-----------------~~~A~~d~~~a 411 (591)
.++|.++..+|++++|+..|++++++ .|. ...+.++|.++..+|+ +++|+..|+++
T Consensus 130 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~a 209 (411)
T 4a1s_A 130 GNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQEN 209 (411)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999 343 4567789999999999 99999999999
Q ss_pred HhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCch------hHhhhHH
Q 007721 412 LALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSF------LRFRQSL 485 (591)
Q Consensus 412 l~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~------~~~~~g~ 485 (591)
+++.+....-.....+...++.+....+++++| +..+++++++.|.... +++++|.
T Consensus 210 l~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A------------------~~~~~~al~~~~~~~~~~~~~~~~~~la~ 271 (411)
T 4a1s_A 210 LKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAA------------------IEHHQERLRIAREFGDRAAERRANSNLGN 271 (411)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH------------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHH------------------HHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 998764322222233444444444444444444 8899999999988776 9999999
Q ss_pred HHHHhCCHHHHHHHHHHHHhcCCch------HHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccH-------HHHHHHHH
Q 007721 486 LLLRLNCQKAAMRCLRLARNHSSSE------HERLVYEGWILYDTGHREEALSRAEKSISIERTF-------EAFFLKAY 552 (591)
Q Consensus 486 ~l~~l~~~~eA~~~~~~Al~l~p~~------~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~-------~~~~~~~~ 552 (591)
++..+|++++|+..+++++++.|.. +.++.++|.++..+|++++|+..|++++.+.+.. .+++..|.
T Consensus 272 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~ 351 (411)
T 4a1s_A 272 SHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGN 351 (411)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHH
Confidence 9999999999999999999999865 8899999999999999999999999999996654 27788887
Q ss_pred HhhhcCCCCCchhHHHHHHHHHhc
Q 007721 553 ILADTNLDPESSTYVIQLLEEALR 576 (591)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~ 576 (591)
++.... .-..-++.+++|++
T Consensus 352 ~~~~~g----~~~~A~~~~~~al~ 371 (411)
T 4a1s_A 352 AHSAIG----GHERALKYAEQHLQ 371 (411)
T ss_dssp HHHHTT----CHHHHHHHHHHHHH
T ss_pred HHHHhc----cHHHHHHHHHHHHH
Confidence 776654 33455667777765
No 78
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.82 E-value=1.5e-21 Score=173.97 Aligned_cols=99 Identities=18% Similarity=0.201 Sum_probs=91.7
Q ss_pred ccCCCCCCceEEEEcCeEEEhhHHHHhhcCHHHHHhhcCCCCCCCCceeEecCCC-CCHHHHHHHHHHHhcCCCCCCChh
Q 007721 48 CLSLEEDDSVTFCVRDKEISFVRNKIASLSSPFKAMLYGGFVESKRKTIDFSHDG-VSVEGLRAVEVYTRTSRVDLFCPG 126 (591)
Q Consensus 48 ~~~~~~~~~V~f~v~g~~~~aHr~iLaa~S~yF~amf~~~~~Es~~~~I~l~~~~-vs~~~~~~ll~ylYtg~~~~~~~~ 126 (591)
...++..+||+|+|+|+.|+|||.||+++|+||++||++++.| ..+|.+ ++ +++++|+.+|+|+|||++. ++.+
T Consensus 26 l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l--~~~~~~~~f~~~l~~iYtg~~~-~~~~ 100 (125)
T 3ohu_A 26 QRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN--DLVVSL--PEEVTARGFGPLLQFAYTAKLL-LSRE 100 (125)
T ss_dssp HHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS--SCEEEC--CTTCCHHHHHHHHHHHTTSEEE-ECTT
T ss_pred HHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC--CcEEEe--CCCCCHHHHHHHHHhHcCCceE-ECHH
Confidence 3355677889999999999999999999999999999999988 568999 87 9999999999999999999 9999
Q ss_pred HHHHHHHHHhhhChHHHHHHHHHHH
Q 007721 127 IVLELLSFANRFCCEEMKSACDAHL 151 (591)
Q Consensus 127 ~v~~lL~~A~~~~i~~L~~~C~~~L 151 (591)
++.+++.+|++|+++.|++.|++||
T Consensus 101 ~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 101 NIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp THHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 9999999999999999999998764
No 79
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.81 E-value=2.6e-18 Score=168.54 Aligned_cols=208 Identities=13% Similarity=-0.049 Sum_probs=166.8
Q ss_pred HHHHHHhhhHHhhhccHHHHHHHHHHHhhccc--cchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcCC
Q 007721 256 MLALHQLGCVMFEREEYKDACYYFEAAADAGH--IYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLYNL 333 (591)
Q Consensus 256 ~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~--~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~~ 333 (591)
..+++.+|..+...|++++|+..|+++++..+ ..++..+|.++...|++
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~----------------------------- 87 (252)
T 2ho1_A 37 RDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEP----------------------------- 87 (252)
T ss_dssp HHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH-----------------------------
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCH-----------------------------
Confidence 56788899999999999999999999988754 34566667777766665
Q ss_pred cHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHh--cCCC-hHHHHHHHHHHHHcCCHHHHHHHHHH
Q 007721 334 GREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIV--FKLS-VDCLELRAWLFIAADDYESALRDTLA 410 (591)
Q Consensus 334 ~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~--l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~ 410 (591)
++|+..|+++++++|++..+|.++|.++...|++++|+..|+++++ ..|. ...+..+|.++..+|++++|+..|++
T Consensus 88 -~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 166 (252)
T 2ho1_A 88 -KLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEK 166 (252)
T ss_dssp -HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 5666677777788888888888889899999999999999999888 6675 56677788888889999999999999
Q ss_pred HHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHh
Q 007721 411 LLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRL 490 (591)
Q Consensus 411 al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l 490 (591)
+++++|++. .+...++.+....+++++| +..++++++.+|.++.++..++.++..+
T Consensus 167 ~~~~~~~~~------~~~~~la~~~~~~g~~~~A------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (252)
T 2ho1_A 167 SLRLNRNQP------SVALEMADLLYKEREYVPA------------------RQYYDLFAQGGGQNARSLLLGIRLAKVF 222 (252)
T ss_dssp HHHHCSCCH------HHHHHHHHHHHHTTCHHHH------------------HHHHHHHHTTSCCCHHHHHHHHHHHHHT
T ss_pred HHhcCcccH------HHHHHHHHHHHHcCCHHHH------------------HHHHHHHHHhCcCcHHHHHHHHHHHHHc
Confidence 999888763 2333344333444444444 7788889999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCchHHHHHhH
Q 007721 491 NCQKAAMRCLRLARNHSSSEHERLVYE 517 (591)
Q Consensus 491 ~~~~eA~~~~~~Al~l~p~~~~a~~~~ 517 (591)
|++++|++.+++++++.|++.++...+
T Consensus 223 g~~~~A~~~~~~~~~~~p~~~~~~~~l 249 (252)
T 2ho1_A 223 EDRDTAASYGLQLKRLYPGSLEYQEFQ 249 (252)
T ss_dssp TCHHHHHHHHHHHHHHCTTSHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 999999999999999999999876543
No 80
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.81 E-value=1.1e-18 Score=166.88 Aligned_cols=206 Identities=11% Similarity=-0.028 Sum_probs=169.8
Q ss_pred cCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhc
Q 007721 347 LDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRV 425 (591)
Q Consensus 347 LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~ 425 (591)
.+|+.+.+|..+|.++...|++++|+..|+++++++|+ +..+..+|.++..+|++++|+..|+++++++|++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~----- 77 (225)
T 2vq2_A 3 KANQVSNIKTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAE----- 77 (225)
T ss_dssp -CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----
T ss_pred CCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChH-----
Confidence 47888999999999999999999999999999999996 788888999999999999999999999999998732
Q ss_pred hHhHHHHHHHhhh-cccCchhhhhhhhhccccccccchHHHHHHHHH--cCCCCchhHhhhHHHHHHhCCHHHHHHHHHH
Q 007721 426 SGDHLVKLLNHHV-RSWSPADCWIKLYDRWSSVDDIGSLAVINQMLI--NDPGKSFLRFRQSLLLLRLNCQKAAMRCLRL 502 (591)
Q Consensus 426 ~~~~~~~~l~~~~-~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~--~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~ 502 (591)
+...++.+.... +++++| +..++++++ .+|.++.+++++|.++..+|++++|+..+++
T Consensus 78 -~~~~l~~~~~~~~~~~~~A------------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 138 (225)
T 2vq2_A 78 -INNNYGWFLCGRLNRPAES------------------MAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKR 138 (225)
T ss_dssp -HHHHHHHHHHTTTCCHHHH------------------HHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred -HHHHHHHHHHHhcCcHHHH------------------HHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 333333333333 444444 889999999 7788899999999999999999999999999
Q ss_pred HHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccc-cHH-HHHHHHHHhhhcCCCCCchhHHHHHHHHHh-cCCC
Q 007721 503 ARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIER-TFE-AFFLKAYILADTNLDPESSTYVIQLLEEAL-RCPS 579 (591)
Q Consensus 503 Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 579 (591)
+++..|+++.++..+|.++..+|++++|+..+++++++.| +.. ++.+.+. +.-..=+.+ .....++.++ ..|.
T Consensus 139 ~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~a~~~~~~~~~~~p~ 214 (225)
T 2vq2_A 139 SLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWK-IAKALGNAQ---AAYEYEAQLQANFPY 214 (225)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHH-HHHHTTCHH---HHHHHHHHHHHHCTT
T ss_pred HHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHH-HHHhcCcHH---HHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999 666 5544444 433333433 3445555554 4565
Q ss_pred C
Q 007721 580 D 580 (591)
Q Consensus 580 ~ 580 (591)
+
T Consensus 215 ~ 215 (225)
T 2vq2_A 215 S 215 (225)
T ss_dssp C
T ss_pred C
Confidence 4
No 81
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.81 E-value=1.4e-20 Score=166.17 Aligned_cols=91 Identities=14% Similarity=0.122 Sum_probs=83.3
Q ss_pred CCCCCceEEEEcCeEEEhhHHHHhhcCHHHHHhhcCCCCCCCCceeEecCCCCCHHHHHHHHHHHhcCCCCCCChhHHHH
Q 007721 51 LEEDDSVTFCVRDKEISFVRNKIASLSSPFKAMLYGGFVESKRKTIDFSHDGVSVEGLRAVEVYTRTSRVDLFCPGIVLE 130 (591)
Q Consensus 51 ~~~~~~V~f~v~g~~~~aHr~iLaa~S~yF~amf~~~~~Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~~~~~~~~~v~~ 130 (591)
++..+||+|+|+|++|+|||.||+++|+||++ ....|++ +++++++|+.+|+|+|||++. ++.+++.+
T Consensus 27 ~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~---------~~~~i~l--~~v~~~~f~~ll~fiYtg~~~-i~~~~v~~ 94 (119)
T 3m5b_A 27 RPALCDTLITVGSQEFPAHSLVLAGVSQQLGR---------RGQWALG--EGISPSTFAQLLNFVYGESVE-LQPGELRP 94 (119)
T ss_dssp TTTTCCEEEEETTEEEEECHHHHHTTCGGGCC---------CEEEECC--SSCCHHHHHHHHHHHTTCCEE-ECGGGHHH
T ss_pred cCCCcceEEEECCEEEeeEHHHHHHcCHHHhc---------CCCEEEe--CCCCHHHHHHHHHHHcCCCcC-cCHHHHHH
Confidence 45677899999999999999999999999985 3468999 999999999999999999999 99999999
Q ss_pred HHHHHhhhChHHHHHHHHHHHHh
Q 007721 131 LLSFANRFCCEEMKSACDAHLAS 153 (591)
Q Consensus 131 lL~~A~~~~i~~L~~~C~~~L~~ 153 (591)
++.+|++|+++.|++.|++++..
T Consensus 95 ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 95 LQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp HHHHHHHTTCHHHHHHHHHHC--
T ss_pred HHHHHHHhCCHHHHHHHHHHHhh
Confidence 99999999999999999998865
No 82
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.81 E-value=2.6e-18 Score=176.42 Aligned_cols=200 Identities=11% Similarity=-0.021 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhC--CHHHHHHHHHHHHhcCCC-hHHHHHHHHHH----HHc---CCHHHH
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEG--QIRAAISEIDRIIVFKLS-VDCLELRAWLF----IAA---DDYESA 404 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~--~~~eAl~~~~~al~l~p~-~~~~~~r~~~~----~~~---g~~~~A 404 (591)
++|+..+++++.+||++..+|++||.++..+| ++++|+..++++|.++|+ +.+|+.|++++ ..+ ++++++
T Consensus 50 ~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~E 129 (306)
T 3dra_A 50 ERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYRE 129 (306)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHH
T ss_pred HHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHH
Confidence 78999999999999999999999999999999 999999999999999995 89999999988 777 899999
Q ss_pred HHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhH
Q 007721 405 LRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQS 484 (591)
Q Consensus 405 ~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g 484 (591)
+..++++++++|++. .+.+.++-+......++ ..+++..++++|+.+|.+-.+|++|+
T Consensus 130 L~~~~~~l~~~pkny------~aW~~R~~vl~~l~~~~----------------~~~EL~~~~~~i~~d~~N~sAW~~R~ 187 (306)
T 3dra_A 130 FDILEAMLSSDPKNH------HVWSYRKWLVDTFDLHN----------------DAKELSFVDKVIDTDLKNNSAWSHRF 187 (306)
T ss_dssp HHHHHHHHHHCTTCH------HHHHHHHHHHHHTTCTT----------------CHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCH------HHHHHHHHHHHHhcccC----------------hHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 999999999999983 34444554444444444 01248899999999999999999999
Q ss_pred HHHHHhCC------HHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHH-HHHHHhhccc---c-cHHHHHHHHHH
Q 007721 485 LLLLRLNC------QKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEAL-SRAEKSISIE---R-TFEAFFLKAYI 553 (591)
Q Consensus 485 ~~l~~l~~------~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl-~~~e~ai~l~---~-~~~~~~~~~~~ 553 (591)
.++..+|+ ++++++.+++++..+|+|..+.+++|+++-..|+..+++ ...++.+.++ | |.-|...+|.+
T Consensus 188 ~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~s~~al~~la~~ 267 (306)
T 3dra_A 188 FLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRSITQLEEFSLQFVDLEKDQVTSSFALETLAKI 267 (306)
T ss_dssp HHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCCGGGGHHHHHTTEEGGGTEESCHHHHHHHHHH
T ss_pred HHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCCChHHHHHHHHHHHhccCCCCCCHHHHHHHHHH
Confidence 99999998 999999999999999999999999999999999976655 5777788876 4 44477777777
Q ss_pred hhh
Q 007721 554 LAD 556 (591)
Q Consensus 554 ~~~ 556 (591)
++.
T Consensus 268 ~~~ 270 (306)
T 3dra_A 268 YTQ 270 (306)
T ss_dssp HHH
T ss_pred HHc
Confidence 764
No 83
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.81 E-value=6e-19 Score=171.45 Aligned_cols=170 Identities=9% Similarity=-0.084 Sum_probs=147.0
Q ss_pred HHHHHHHHHHHHcCC-CChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 007721 335 REKIVDLNYASELDP-TLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALL 412 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP-~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al 412 (591)
++|+..|+++++++| .+..+++++|.++..+|++++|+..|+++++++|+ +..+..+|.++..+|++++|+..|++++
T Consensus 24 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al 103 (228)
T 4i17_A 24 AVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGI 103 (228)
T ss_dssp HHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 778888888999998 89999999999999999999999999999999997 6888899999999999999999999999
Q ss_pred hcCCcchhhhhhc-hHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCC--CchhHhhhHHHHHH
Q 007721 413 ALESNYMMFHGRV-SGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPG--KSFLRFRQSLLLLR 489 (591)
Q Consensus 413 ~l~P~~~~~~~~~-~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~--~~~~~~~~g~~l~~ 489 (591)
+++|++..+.... .+...++.+....+++++| +..++++++++|. ++.+++++|.++..
T Consensus 104 ~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A------------------~~~~~~al~~~p~~~~~~~~~~l~~~~~~ 165 (228)
T 4i17_A 104 KAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKA------------------EENYKHATDVTSKKWKTDALYSLGVLFYN 165 (228)
T ss_dssp HHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHH------------------HHHHHHHTTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHH------------------HHHHHHHHhcCCCcccHHHHHHHHHHHHH
Confidence 9999985422211 2344444444444444444 8999999999999 99999999999999
Q ss_pred hCCH---------------------------HHHHHHHHHHHhcCCchHHHHHhHHHHHH
Q 007721 490 LNCQ---------------------------KAAMRCLRLARNHSSSEHERLVYEGWILY 522 (591)
Q Consensus 490 l~~~---------------------------~eA~~~~~~Al~l~p~~~~a~~~~G~~l~ 522 (591)
+|.. ++|+..+++|++++|++.+++..++.+..
T Consensus 166 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~i~~ 225 (228)
T 4i17_A 166 NGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNRTEIKQMQDQVKA 225 (228)
T ss_dssp HHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHH
Confidence 9999 99999999999999999999998887754
No 84
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.81 E-value=1.1e-20 Score=169.52 Aligned_cols=99 Identities=14% Similarity=0.156 Sum_probs=84.8
Q ss_pred CCCCCCceEEEEcCeEEEhhHHHHhhcCHHHHHhhcCCCCCCCCceeEecCC-CCCHHHHHHHHHHHhcCCCCCCChhHH
Q 007721 50 SLEEDDSVTFCVRDKEISFVRNKIASLSSPFKAMLYGGFVESKRKTIDFSHD-GVSVEGLRAVEVYTRTSRVDLFCPGIV 128 (591)
Q Consensus 50 ~~~~~~~V~f~v~g~~~~aHr~iLaa~S~yF~amf~~~~~Es~~~~I~l~~~-~vs~~~~~~ll~ylYtg~~~~~~~~~v 128 (591)
.++..+||+|.|+|+.|+|||.||+++|+||++||+++ ...+|+| + ++++++|+.+|+|+|||++. ++.+++
T Consensus 29 ~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~----~~~~i~l--~~~~~~~~f~~ll~~iYtg~~~-i~~~~~ 101 (129)
T 3ga1_A 29 LQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS----RSAVVEL--PAAVQPQSFQQILSFCYTGRLS-MNVGDQ 101 (129)
T ss_dssp HTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC----CCSEEEC--CTTCCHHHHHHHHHHHHHSEEE-CCTTTH
T ss_pred hcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC----CCCEEEE--CCCCCHHHHHHHHHHHhCCccc-cCHHHH
Confidence 45667789999999999999999999999999999987 5568999 7 89999999999999999999 999999
Q ss_pred HHHHHHHhhhChHHHHHHHHHHHHhhc
Q 007721 129 LELLSFANRFCCEEMKSACDAHLASLV 155 (591)
Q Consensus 129 ~~lL~~A~~~~i~~L~~~C~~~L~~~i 155 (591)
.+++.+|++|+++.|++.|++||.+..
T Consensus 102 ~~ll~~A~~~~i~~l~~~C~~~L~~~~ 128 (129)
T 3ga1_A 102 DLLMYTAGFLQIQEIMEKGTEFFLKVS 128 (129)
T ss_dssp HHHHHHHHHTTBTTSSCC---------
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999998653
No 85
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.80 E-value=2e-18 Score=171.61 Aligned_cols=188 Identities=11% Similarity=0.046 Sum_probs=154.4
Q ss_pred HHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC----hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcch
Q 007721 344 ASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS----VDCLELRAWLFIAADDYESALRDTLALLALESNYM 419 (591)
Q Consensus 344 Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~----~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~ 419 (591)
..+++|+.+..++.+|..++..|++++|+..|+++++..|+ +.+++.+|.++..+|++++|+..|++++++.|++.
T Consensus 7 ~~~~~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~ 86 (261)
T 3qky_A 7 SGRLRHSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDP 86 (261)
T ss_dssp ----CCSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCc
Confidence 45789999999999999999999999999999999999994 56788899999999999999999999999999763
Q ss_pred hhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccc-hHHHHHHHHHcCCCCchhH-----------------h
Q 007721 420 MFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIG-SLAVINQMLINDPGKSFLR-----------------F 481 (591)
Q Consensus 420 ~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~-al~~~~~al~~~P~~~~~~-----------------~ 481 (591)
. ...+...++.+...... +.....+++. |+..++++++.+|+++.++ +
T Consensus 87 ~---~~~a~~~lg~~~~~~~~-----------~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~ 152 (261)
T 3qky_A 87 R---VPQAEYERAMCYYKLSP-----------PYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQY 152 (261)
T ss_dssp T---HHHHHHHHHHHHHHHCC-----------CTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred h---hHHHHHHHHHHHHHhcc-----------cccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHH
Confidence 1 11233334333333000 0000023333 5889999999999999888 8
Q ss_pred hhHHHHHHhCCHHHHHHHHHHHHhcCCc---hHHHHHhHHHHHHHc----------CCHHHHHHHHHHhhcccccHH
Q 007721 482 RQSLLLLRLNCQKAAMRCLRLARNHSSS---EHERLVYEGWILYDT----------GHREEALSRAEKSISIERTFE 545 (591)
Q Consensus 482 ~~g~~l~~l~~~~eA~~~~~~Al~l~p~---~~~a~~~~G~~l~~~----------g~~eeAl~~~e~ai~l~~~~~ 545 (591)
++|.++..+|++++|+..|+++++..|+ .+++++++|.+++.+ |++++|+..|++++++.|+..
T Consensus 153 ~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 229 (261)
T 3qky_A 153 EAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSP 229 (261)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHCCCCh
Confidence 9999999999999999999999999999 678999999999987 999999999999999999874
No 86
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.80 E-value=9.8e-19 Score=176.65 Aligned_cols=265 Identities=11% Similarity=-0.037 Sum_probs=210.6
Q ss_pred hhhhHHHHHHhCChHHHHHHHHHHHHhcCCC----HHHHHHHHh----cCCcHHHHHHHHHHHHc------CCCChHHHH
Q 007721 291 LAGLARAKYKVGQQYSAYKLINSIISEHKPT----GWMYQERSL----YNLGREKIVDLNYASEL------DPTLSFPYK 356 (591)
Q Consensus 291 ~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~----g~a~~~r~~----y~~~~eA~~dl~~Ai~L------dP~~~~ay~ 356 (591)
+...|..+...|++++|+..+.+++...|+. +.++...+. .+..++|+..+++++++ .|..+.++.
T Consensus 8 l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 87 (338)
T 3ro2_A 8 LALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASG 87 (338)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHH
Confidence 4456888999999999999999999998875 345555543 23338999999999998 777789999
Q ss_pred hHHHHHHHhCCHHHHHHHHHHHHhcCCC-------hHHHHHHHHHHHHcCC--------------------HHHHHHHHH
Q 007721 357 YRAVAKMEEGQIRAAISEIDRIIVFKLS-------VDCLELRAWLFIAADD--------------------YESALRDTL 409 (591)
Q Consensus 357 ~rg~~l~~l~~~~eAl~~~~~al~l~p~-------~~~~~~r~~~~~~~g~--------------------~~~A~~d~~ 409 (591)
.+|.++..+|++++|+..+++++++.|. ...+..+|.++..+|+ +++|+..++
T Consensus 88 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~ 167 (338)
T 3ro2_A 88 NLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYE 167 (338)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHH
Confidence 9999999999999999999999998652 1256778999999999 999999999
Q ss_pred HHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCch------hHhhh
Q 007721 410 ALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSF------LRFRQ 483 (591)
Q Consensus 410 ~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~------~~~~~ 483 (591)
+++++.+..........+....+.+....+++++| +..+++++++.|.... +++++
T Consensus 168 ~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A------------------~~~~~~a~~~~~~~~~~~~~~~~~~~l 229 (338)
T 3ro2_A 168 ENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDA------------------VIAHEQRLLIAKEFGDKAAERRAYSNL 229 (338)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHH------------------HHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH------------------HHHHHHHHHHHHhcCChHHHHHHHHHH
Confidence 99988554322222233444444444444444444 7888999988776655 99999
Q ss_pred HHHHHHhCCHHHHHHHHHHHHhcCCch------HHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH-------HHHHH
Q 007721 484 SLLLLRLNCQKAAMRCLRLARNHSSSE------HERLVYEGWILYDTGHREEALSRAEKSISIERTFE-------AFFLK 550 (591)
Q Consensus 484 g~~l~~l~~~~eA~~~~~~Al~l~p~~------~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~-------~~~~~ 550 (591)
|.++..+|++++|+..+++++++.|+. +.++.++|.++..+|++++|+..+++|+++.|... +++..
T Consensus 230 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l 309 (338)
T 3ro2_A 230 GNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSL 309 (338)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 999999999999999999999998877 88999999999999999999999999999876642 77777
Q ss_pred HHHhhhcCCCCCchhHHHHHHHHHhcC
Q 007721 551 AYILADTNLDPESSTYVIQLLEEALRC 577 (591)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (591)
|.++...+ --...+..+++|++.
T Consensus 310 a~~~~~~g----~~~~A~~~~~~a~~~ 332 (338)
T 3ro2_A 310 GNAYTALG----NHDQAMHFAEKHLEI 332 (338)
T ss_dssp HHHHHHHT----CHHHHHHHHHHHHHC
T ss_pred HHHHHHcC----ChHHHHHHHHHHHHH
Confidence 77776654 234556677777653
No 87
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.80 E-value=3.4e-19 Score=158.52 Aligned_cols=121 Identities=17% Similarity=0.107 Sum_probs=110.2
Q ss_pred HHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhh
Q 007721 343 YASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMF 421 (591)
Q Consensus 343 ~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~ 421 (591)
++..+||+.+.+|.++|+++...|++++|+..|++||+++|+ +..+.++|.++..+|++++|+.+|+++++++|++
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~--- 80 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKF--- 80 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---
T ss_pred HHHHHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhh---
Confidence 456799999999999999999999999999999999999995 8889999999999999999999998888888875
Q ss_pred hhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHH
Q 007721 422 HGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLR 501 (591)
Q Consensus 422 ~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~ 501 (591)
+.+|+++|.++..+|++++|+..|+
T Consensus 81 -------------------------------------------------------~~a~~~lg~~~~~~~~~~~A~~~~~ 105 (126)
T 4gco_A 81 -------------------------------------------------------IKGYIRKAACLVAMREWSKAQRAYE 105 (126)
T ss_dssp -------------------------------------------------------HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred -------------------------------------------------------hHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 4578899999999999999999999
Q ss_pred HHHhcCCchHHHHHhHHHHH
Q 007721 502 LARNHSSSEHERLVYEGWIL 521 (591)
Q Consensus 502 ~Al~l~p~~~~a~~~~G~~l 521 (591)
+|++++|++.+++.++|.++
T Consensus 106 ~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 106 DALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHCcCCHHHHHHHHHhc
Confidence 99999999999999998875
No 88
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.79 E-value=4.4e-19 Score=166.24 Aligned_cols=168 Identities=14% Similarity=0.054 Sum_probs=141.5
Q ss_pred CCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhch
Q 007721 348 DPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVS 426 (591)
Q Consensus 348 dP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~ 426 (591)
+|.....+..+|.++...|++++|+..|+++++++|+ +..+..+|.++..+|++++|+..|+++++++| +..+..
T Consensus 2 ~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~--- 77 (176)
T 2r5s_A 2 NASPDEQLLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKS--- 77 (176)
T ss_dssp ----CTTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHH---
T ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHH---
Confidence 5667788999999999999999999999999999996 78889999999999999999999999999999 643221
Q ss_pred HhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhc
Q 007721 427 GDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNH 506 (591)
Q Consensus 427 ~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l 506 (591)
....+... ++. +..+++..++++++++|+++.+++++|.++..+|++++|+..|++++++
T Consensus 78 ---~~~~~~~~-~~~----------------~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 137 (176)
T 2r5s_A 78 ---LIAKLELH-QQA----------------AESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKV 137 (176)
T ss_dssp ---HHHHHHHH-HHH----------------TSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred ---HHHHHHHH-hhc----------------ccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHh
Confidence 11111000 000 1223588999999999999999999999999999999999999999999
Q ss_pred CCch--HHHHHhHHHHHHHcCCHHHHHHHHHHhhc
Q 007721 507 SSSE--HERLVYEGWILYDTGHREEALSRAEKSIS 539 (591)
Q Consensus 507 ~p~~--~~a~~~~G~~l~~~g~~eeAl~~~e~ai~ 539 (591)
+|+. +.++.++|.++..+|+.++|+..|+++++
T Consensus 138 ~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 138 NLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp CTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred CcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 9986 55999999999999999999999999985
No 89
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.79 E-value=6.3e-20 Score=204.40 Aligned_cols=186 Identities=10% Similarity=0.139 Sum_probs=162.2
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCC----------HHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcC--CH
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQ----------IRAAISEIDRIIVFKLS-VDCLELRAWLFIAAD--DY 401 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~----------~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g--~~ 401 (591)
++|+..++++++++|++..+|++||.++..+|+ +++|++.++++|+.+|+ +.+|+.|++++..+| ++
T Consensus 46 eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~ 125 (567)
T 1dce_A 46 ESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNW 125 (567)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCH
T ss_pred HHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccH
Confidence 788999999999999999999999999999999 99999999999999995 899999999999999 77
Q ss_pred HHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhc-ccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhH
Q 007721 402 ESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVR-SWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLR 480 (591)
Q Consensus 402 ~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~-~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~ 480 (591)
++|+..+++++++||++.. +...++-+..... .+++ ++..++++|+.+|.+..+|
T Consensus 126 ~~el~~~~k~l~~d~~N~~------aW~~R~~~l~~l~~~~~~------------------el~~~~~~I~~~p~n~saW 181 (567)
T 1dce_A 126 ARELELCARFLEADERNFH------CWDYRRFVAAQAAVAPAE------------------ELAFTDSLITRNFSNYSSW 181 (567)
T ss_dssp HHHHHHHHHHHHHCTTCHH------HHHHHHHHHHHTCCCHHH------------------HHHHHHTTTTTTCCCHHHH
T ss_pred HHHHHHHHHHHhhcccccc------HHHHHHHHHHHcCCChHH------------------HHHHHHHHHHHCCCCccHH
Confidence 9999999999999999833 3333332222222 2222 5889999999999999999
Q ss_pred hhhHHHHHHh--------------CCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHH------------HHHHH
Q 007721 481 FRQSLLLLRL--------------NCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREE------------ALSRA 534 (591)
Q Consensus 481 ~~~g~~l~~l--------------~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~ee------------Al~~~ 534 (591)
+++|.++.++ +++++|++.+++|+.++|++..+++|+||++...|++++ |+..|
T Consensus 182 ~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll~~~~~~~~~~~~~~~~~~~~~~~~f 261 (567)
T 1dce_A 182 HYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAEPHDVLCCVHVSREEACLSVCF 261 (567)
T ss_dssp HHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHSCCCCCSCEEEEEEETTTTEEEEEE
T ss_pred HHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHhcCCCccceeeeeeccCCceEEEEe
Confidence 9999999997 567999999999999999999999999999999999888 77778
Q ss_pred HHhhcccccH
Q 007721 535 EKSISIERTF 544 (591)
Q Consensus 535 e~ai~l~~~~ 544 (591)
.+|+.++|+.
T Consensus 262 ~~~i~~~~~~ 271 (567)
T 1dce_A 262 SRPLTVGSRM 271 (567)
T ss_dssp EEEECTTBTT
T ss_pred ccceeccccc
Confidence 9999999864
No 90
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.79 E-value=2.5e-19 Score=164.17 Aligned_cols=95 Identities=14% Similarity=0.034 Sum_probs=54.4
Q ss_pred CHHHHHHHHhcCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcC
Q 007721 321 TGWMYQERSLYNLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAAD 399 (591)
Q Consensus 321 ~g~a~~~r~~y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g 399 (591)
+|.++..++.+ ++|++.+.+++..+|+.+.+++++|.+|.++|++++|+..|+++|+++|+ +.++.++|.++..+|
T Consensus 3 LG~~~~~~~~~---e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~ 79 (150)
T 4ga2_A 3 LGSMRRSKADV---ERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEE 79 (150)
T ss_dssp ----CCCHHHH---HHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHcChH---HHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 34444445444 56666666666666666666666666666666666666666666666663 555556666666666
Q ss_pred CHHHHHHHHHHHHhcCCcc
Q 007721 400 DYESALRDTLALLALESNY 418 (591)
Q Consensus 400 ~~~~A~~d~~~al~l~P~~ 418 (591)
++++|+..|+++++++|++
T Consensus 80 ~~~~A~~~~~~al~~~p~~ 98 (150)
T 4ga2_A 80 NTDKAVECYRRSVELNPTQ 98 (150)
T ss_dssp CHHHHHHHHHHHHHHCTTC
T ss_pred chHHHHHHHHHHHHhCCCC
Confidence 6666665555555555543
No 91
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.79 E-value=1.5e-19 Score=165.74 Aligned_cols=144 Identities=11% Similarity=0.044 Sum_probs=124.0
Q ss_pred hHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHH
Q 007721 357 YRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLN 435 (591)
Q Consensus 357 ~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~ 435 (591)
++|.++...|++++|++.+.+++..+|+ +..++.+|.+|..+|++++|+..|+++++++|++
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~----------------- 64 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERD----------------- 64 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----------------
T ss_pred HhHHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----------------
Confidence 5788999999999999999999998885 6778889999999999999999888888888865
Q ss_pred hhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHH
Q 007721 436 HHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLV 515 (591)
Q Consensus 436 ~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~ 515 (591)
+.+|+++|.++..+|++++|+..|++|++++|+++++++
T Consensus 65 -----------------------------------------~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 103 (150)
T 4ga2_A 65 -----------------------------------------PKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVL 103 (150)
T ss_dssp -----------------------------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred -----------------------------------------HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHH
Confidence 467889999999999999999999999999999999999
Q ss_pred hHHHHHHHcCCHHHHHHHH-HHhhcccccHH-HHHHHHHHhhhcC
Q 007721 516 YEGWILYDTGHREEALSRA-EKSISIERTFE-AFFLKAYILADTN 558 (591)
Q Consensus 516 ~~G~~l~~~g~~eeAl~~~-e~ai~l~~~~~-~~~~~~~~~~~~~ 558 (591)
++|.+++.+|++++|...| ++|++++|+.. +|.+|+-.+.-.+
T Consensus 104 ~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~~G 148 (150)
T 4ga2_A 104 KIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDCEG 148 (150)
T ss_dssp HHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhC
Confidence 9999999999999888775 99999999887 8899988775443
No 92
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.78 E-value=6.1e-17 Score=161.66 Aligned_cols=208 Identities=13% Similarity=0.046 Sum_probs=170.3
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHH----hCCHHHHHHHHHHHHhcCCChHHHHHHHHHHHH----cCCHHHHHH
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKME----EGQIRAAISEIDRIIVFKLSVDCLELRAWLFIA----ADDYESALR 406 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~----l~~~~eAl~~~~~al~l~p~~~~~~~r~~~~~~----~g~~~~A~~ 406 (591)
++|+..|+++++ |+++.++.++|.++.. .+++++|+..|+++++++ ++.+++++|.++.. .|++++|+.
T Consensus 23 ~~A~~~~~~a~~--~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~-~~~a~~~lg~~~~~g~~~~~~~~~A~~ 99 (273)
T 1ouv_A 23 TQAKKYFEKACD--LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN-YSNGCHLLGNLYYSGQGVSQNTNKALQ 99 (273)
T ss_dssp HHHHHHHHHHHH--TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHTSSSCCCHHHHHH
T ss_pred HHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC-CHHHHHHHHHHHhCCCCcccCHHHHHH
Confidence 677777788887 7888999999999999 999999999999999886 68888999999999 999999999
Q ss_pred HHHHHHhcCCcchhhhhhchHhHHHHHHHhh----hcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhh
Q 007721 407 DTLALLALESNYMMFHGRVSGDHLVKLLNHH----VRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFR 482 (591)
Q Consensus 407 d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~----~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~ 482 (591)
.|+++++++ + ..+...++.+... .+++++ |+..++++++.+ ++.++++
T Consensus 100 ~~~~a~~~~--~------~~a~~~lg~~~~~~~~~~~~~~~------------------A~~~~~~a~~~~--~~~a~~~ 151 (273)
T 1ouv_A 100 YYSKACDLK--Y------AEGCASLGGIYHDGKVVTRDFKK------------------AVEYFTKACDLN--DGDGCTI 151 (273)
T ss_dssp HHHHHHHTT--C------HHHHHHHHHHHHHCSSSCCCHHH------------------HHHHHHHHHHTT--CHHHHHH
T ss_pred HHHHHHHcC--C------ccHHHHHHHHHHcCCCcccCHHH------------------HHHHHHHHHhcC--cHHHHHH
Confidence 999999985 2 2234444433333 333333 588999999986 6889999
Q ss_pred hHHHHHH----hCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHH----cCCHHHHHHHHHHhhcccccHHHHHHHHHHh
Q 007721 483 QSLLLLR----LNCQKAAMRCLRLARNHSSSEHERLVYEGWILYD----TGHREEALSRAEKSISIERTFEAFFLKAYIL 554 (591)
Q Consensus 483 ~g~~l~~----l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~----~g~~eeAl~~~e~ai~l~~~~~~~~~~~~~~ 554 (591)
+|.++.. .+++++|+..|++|++.. ++++++++|+++.. .|++++|+..|++|+++.| ..+++..|.++
T Consensus 152 lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~-~~a~~~l~~~~ 228 (273)
T 1ouv_A 152 LGSLYDAGRGTPKDLKKALASYDKACDLK--DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN-GGGCFNLGAMQ 228 (273)
T ss_dssp HHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC-HHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC-HHHHHHHHHHH
Confidence 9999999 999999999999999985 57899999999999 9999999999999999988 67899999998
Q ss_pred hhcCCCCCchhHHHHHHHHHhc
Q 007721 555 ADTNLDPESSTYVIQLLEEALR 576 (591)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~ 576 (591)
.+..-....-..-++.++.|+.
T Consensus 229 ~~g~~~~~~~~~A~~~~~~a~~ 250 (273)
T 1ouv_A 229 YNGEGVTRNEKQAIENFKKGCK 250 (273)
T ss_dssp HTTSSSSCCSTTHHHHHHHHHH
T ss_pred HcCCCcccCHHHHHHHHHHHHH
Confidence 8732112222334555666553
No 93
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.78 E-value=6.4e-19 Score=177.27 Aligned_cols=246 Identities=15% Similarity=0.086 Sum_probs=174.3
Q ss_pred hhhHHHHHHHHhhhHHhhhccHHHHHHHHHHHhhc-------cc---cchhhhhHHHHHHhCChHHHHHHHHHHHHhcCC
Q 007721 251 ERWQRMLALHQLGCVMFEREEYKDACYYFEAAADA-------GH---IYSLAGLARAKYKVGQQYSAYKLINSIISEHKP 320 (591)
Q Consensus 251 ~~~~~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~-------~~---~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~ 320 (591)
+......++..+|.++...|++++|+..|++++++ .+ ..++..+|.++...|++++|...+.+++....
T Consensus 22 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~- 100 (311)
T 3nf1_A 22 EIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIRE- 100 (311)
T ss_dssp TSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-
T ss_pred cchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-
Confidence 33345678899999999999999999999999985 11 23566778888888888777666665554421
Q ss_pred CHHHHHHHHhcCCcHHHHHHHHHHH-HcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcC--------CC-hHHHHH
Q 007721 321 TGWMYQERSLYNLGREKIVDLNYAS-ELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFK--------LS-VDCLEL 390 (591)
Q Consensus 321 ~g~a~~~r~~y~~~~eA~~dl~~Ai-~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~--------p~-~~~~~~ 390 (591)
+.. .-+|....+|.++|.++..+|++++|+..|++++++. |. ...+..
T Consensus 101 ----------------------~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 158 (311)
T 3nf1_A 101 ----------------------KTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNN 158 (311)
T ss_dssp ----------------------HHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ----------------------HHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Confidence 000 1145667889999999999999999999999999984 32 455778
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhc--------CCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccch
Q 007721 391 RAWLFIAADDYESALRDTLALLAL--------ESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGS 462 (591)
Q Consensus 391 r~~~~~~~g~~~~A~~d~~~al~l--------~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~a 462 (591)
+|.++..+|++++|+..|++++++ +|.. ..+...++.+....+++++|
T Consensus 159 la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~------~~~~~~la~~~~~~g~~~~A------------------ 214 (311)
T 3nf1_A 159 LALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNV------AKTKNNLASCYLKQGKFKQA------------------ 214 (311)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHH------HHHHHHHHHHHHHHTCHHHH------------------
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHH------HHHHHHHHHHHHHcCCHHHH------------------
Confidence 999999999999999999999998 4443 33444455555555555555
Q ss_pred HHHHHHHHHc---------CCCCchhHhhh------HHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCH
Q 007721 463 LAVINQMLIN---------DPGKSFLRFRQ------SLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHR 527 (591)
Q Consensus 463 l~~~~~al~~---------~P~~~~~~~~~------g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~ 527 (591)
+..+++++++ +|.....+... +......+.+.+|+..++++....|..+.++.++|.++..+|++
T Consensus 215 ~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 294 (311)
T 3nf1_A 215 ETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKF 294 (311)
T ss_dssp HHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCH
Confidence 7778888864 34444444444 44444566677788899999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccc
Q 007721 528 EEALSRAEKSISIERT 543 (591)
Q Consensus 528 eeAl~~~e~ai~l~~~ 543 (591)
++|+..|++|+++.|.
T Consensus 295 ~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 295 EAAETLEEAAMRSRKQ 310 (311)
T ss_dssp HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHhhc
Confidence 9999999999999875
No 94
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.78 E-value=4.6e-18 Score=172.78 Aligned_cols=170 Identities=14% Similarity=0.050 Sum_probs=148.8
Q ss_pred HcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhh
Q 007721 346 ELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGR 424 (591)
Q Consensus 346 ~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~ 424 (591)
..-|+...++..+|..+.+.|++++|++.|+++++++|+ +++++.+|.++..+|++++|+..|+++++++|+....
T Consensus 111 ~~lp~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~--- 187 (287)
T 3qou_A 111 XVLPREEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQ--- 187 (287)
T ss_dssp HHSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHH---
T ss_pred HHcCCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHH---
Confidence 334999999999999999999999999999999999995 7888999999999999999999999999999975321
Q ss_pred chHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHH
Q 007721 425 VSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLAR 504 (591)
Q Consensus 425 ~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al 504 (591)
............+.+. ++..++++++.+|+++++++++|.++..+|++++|++.|++++
T Consensus 188 ---~~~~~~~l~~~~~~~~------------------a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l 246 (287)
T 3qou_A 188 ---GLVAQIELLXQAADTP------------------EIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHL 246 (287)
T ss_dssp ---HHHHHHHHHHHHTSCH------------------HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHhhcccCc------------------cHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 1111111122222333 4788999999999999999999999999999999999999999
Q ss_pred hcCCch--HHHHHhHHHHHHHcCCHHHHHHHHHHhhc
Q 007721 505 NHSSSE--HERLVYEGWILYDTGHREEALSRAEKSIS 539 (591)
Q Consensus 505 ~l~p~~--~~a~~~~G~~l~~~g~~eeAl~~~e~ai~ 539 (591)
+.+|++ +.++.++|.++..+|+.++|+..|+|+++
T Consensus 247 ~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 247 RXDLTAADGQTRXTFQEILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHCTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hcccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 999999 99999999999999999999999999986
No 95
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.77 E-value=1.6e-16 Score=175.00 Aligned_cols=211 Identities=10% Similarity=-0.050 Sum_probs=167.3
Q ss_pred HHHHHHHHHHHcCCCChHHHHhHHHHHHH-------hCCHH-------HHHHHHHHHHh-cCCC-hHHHHHHHHHHHHcC
Q 007721 336 EKIVDLNYASELDPTLSFPYKYRAVAKME-------EGQIR-------AAISEIDRIIV-FKLS-VDCLELRAWLFIAAD 399 (591)
Q Consensus 336 eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~-------l~~~~-------eAl~~~~~al~-l~p~-~~~~~~r~~~~~~~g 399 (591)
.++..|++|+..+|.++..|.++|..+.. +|+++ +|+..|++|++ ++|+ ...|..++.++...|
T Consensus 256 ~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g 335 (530)
T 2ooe_A 256 RVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRM 335 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcC
Confidence 56779999999999999999999999987 79987 99999999997 8996 788888999999999
Q ss_pred CHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchh
Q 007721 400 DYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFL 479 (591)
Q Consensus 400 ~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~ 479 (591)
++++|...|+++++++|++.. .+....+.+....+++++ |...|++|++..|.....
T Consensus 336 ~~~~A~~~~~~al~~~p~~~~-----~~~~~~~~~~~~~~~~~~------------------A~~~~~~Al~~~~~~~~~ 392 (530)
T 2ooe_A 336 KYEKVHSIYNRLLAIEDIDPT-----LVYIQYMKFARRAEGIKS------------------GRMIFKKAREDARTRHHV 392 (530)
T ss_dssp CHHHHHHHHHHHHHSSSSCHH-----HHHHHHHHHHHHHHHHHH------------------HHHHHHHHHTCTTCCTHH
T ss_pred CHHHHHHHHHHHhCccccCch-----HHHHHHHHHHHHhcCHHH------------------HHHHHHHHHhccCCchHH
Confidence 999999999999999998631 122222222222233333 488999999999998888
Q ss_pred HhhhHHH-HHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccH----HHHHHHHHHh
Q 007721 480 RFRQSLL-LLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTF----EAFFLKAYIL 554 (591)
Q Consensus 480 ~~~~g~~-l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~----~~~~~~~~~~ 554 (591)
+...+.+ +..+|++++|...|++|++..|++++++.+.|..+..+|+.++|...|++|+...|.. ...+.+-..+
T Consensus 393 ~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~~~~~~~~~lw~~~~~~ 472 (530)
T 2ooe_A 393 YVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAF 472 (530)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCSCGGGCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhccCCCHHHHHHHHHHHHHH
Confidence 8777665 3469999999999999999999999999999999999999999999999999985432 2344443444
Q ss_pred hhcCCCCCchhHHHH
Q 007721 555 ADTNLDPESSTYVIQ 569 (591)
Q Consensus 555 ~~~~~~~~~~~~~~~ 569 (591)
+...=|+++...|.+
T Consensus 473 e~~~G~~~~~~~~~~ 487 (530)
T 2ooe_A 473 ESNIGDLASILKVEK 487 (530)
T ss_dssp HHHSSCHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHH
Confidence 444435444444433
No 96
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.77 E-value=4e-18 Score=179.27 Aligned_cols=245 Identities=12% Similarity=-0.020 Sum_probs=157.7
Q ss_pred HHHHHhhhHHhhhccHHHHHHHHHHHhhc----c----ccchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHH
Q 007721 257 LALHQLGCVMFEREEYKDACYYFEAAADA----G----HIYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQER 328 (591)
Q Consensus 257 ~a~~~lG~~~~~~g~~~eA~~~f~~Al~~----~----~~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r 328 (591)
..++.+|..+...|++++|+..|++|+.+ + ...++..+|.++...|+++.|+..+.+++...+..+.
T Consensus 104 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~----- 178 (383)
T 3ulq_A 104 YFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEA----- 178 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCST-----
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcc-----
Confidence 34567999999999999999999999987 1 1346778888999999998888888888776533211
Q ss_pred HhcCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCCh-------HHHHHHHHHHHHcCCH
Q 007721 329 SLYNLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLSV-------DCLELRAWLFIAADDY 401 (591)
Q Consensus 329 ~~y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~~-------~~~~~r~~~~~~~g~~ 401 (591)
..|..+.++.++|.++..+|++++|+..|++|+++.|.. ..+.++|.++..+|++
T Consensus 179 ------------------~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~ 240 (383)
T 3ulq_A 179 ------------------YNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQY 240 (383)
T ss_dssp ------------------THHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred ------------------chHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCH
Confidence 011123345555555555555666665555555553311 2344555555555566
Q ss_pred HHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHc-----CCCC
Q 007721 402 ESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLIN-----DPGK 476 (591)
Q Consensus 402 ~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~-----~P~~ 476 (591)
++|+..|++++++.+....-.+...+...++.+....+++++| +..+++++++ +|..
T Consensus 241 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A------------------~~~~~~al~~~~~~~~~~~ 302 (383)
T 3ulq_A 241 EDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKA------------------HEYHSKGMAYSQKAGDVIY 302 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHH------------------HHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHH------------------HHHHHHHHHHHHHcCCHHH
Confidence 6666555555553211100000122223333333333333333 4455555555 2333
Q ss_pred chhHhhhHHHHHHhCC---HHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhccccc
Q 007721 477 SFLRFRQSLLLLRLNC---QKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERT 543 (591)
Q Consensus 477 ~~~~~~~g~~l~~l~~---~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~ 543 (591)
...+..+|.++...|+ .++|+..++++ ...|...+++.++|.++..+|++++|+..|++|+++..+
T Consensus 303 ~~~~~~l~~~~~~~~~~~~~~~al~~~~~~-~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~~~~ 371 (383)
T 3ulq_A 303 LSEFEFLKSLYLSGPDEEAIQGFFDFLESK-MLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQL 371 (383)
T ss_dssp HHHHHHHHHHHTSSCCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHC-cCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 3335668888888898 88999999888 677788899999999999999999999999999987654
No 97
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.77 E-value=7.7e-18 Score=155.56 Aligned_cols=170 Identities=15% Similarity=0.163 Sum_probs=139.6
Q ss_pred hHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHH
Q 007721 352 SFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHL 430 (591)
Q Consensus 352 ~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~ 430 (591)
+..|..+|.++...|++++|+..++++++.+|+ +..+..+|.++...|++++|+..++++++++|++.. +...
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~------~~~~ 81 (186)
T 3as5_A 8 QVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVK------VATV 81 (186)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH------HHHH
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHH------HHHH
Confidence 456777888888888888888888888888874 666777888888888888888888888888887632 2333
Q ss_pred HHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCch
Q 007721 431 VKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSE 510 (591)
Q Consensus 431 ~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~ 510 (591)
.+.+....+++++| +..+++++..+|.++.+++.+|.++..+|++++|+..++++++..|++
T Consensus 82 ~a~~~~~~~~~~~A------------------~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 143 (186)
T 3as5_A 82 LGLTYVQVQKYDLA------------------VPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNE 143 (186)
T ss_dssp HHHHHHHHTCHHHH------------------HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHhcCHHHH------------------HHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccc
Confidence 33333333444444 777888888888888999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH
Q 007721 511 HERLVYEGWILYDTGHREEALSRAEKSISIERTFE 545 (591)
Q Consensus 511 ~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~ 545 (591)
+.++.++|.+++.+|++++|+..+++++++.|++.
T Consensus 144 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~ 178 (186)
T 3as5_A 144 GKVHRAIAFSYEQMGRHEEALPHFKKANELDEGAS 178 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCCC
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCch
Confidence 99999999999999999999999999999988764
No 98
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.77 E-value=6.6e-18 Score=171.78 Aligned_cols=179 Identities=8% Similarity=-0.085 Sum_probs=143.5
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCC---C----hHHHHHHHHHHHHcCCHHHHHHH
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKL---S----VDCLELRAWLFIAADDYESALRD 407 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p---~----~~~~~~r~~~~~~~g~~~~A~~d 407 (591)
++|+..|++| |.++..+|++++|+..|++|+++.+ + ...+.++|.++..+|++++|+..
T Consensus 34 ~~A~~~~~~a--------------~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~ 99 (292)
T 1qqe_A 34 EEAADLCVQA--------------ATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDS 99 (292)
T ss_dssp HHHHHHHHHH--------------HHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHH--------------HHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 7777777777 6789999999999999999999953 1 34677899999999999999999
Q ss_pred HHHHHhcCCcchhhhhhchHhHHHHHHHhhh-cccCchhhhhhhhhccccccccchHHHHHHHHHcCCCC------chhH
Q 007721 408 TLALLALESNYMMFHGRVSGDHLVKLLNHHV-RSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGK------SFLR 480 (591)
Q Consensus 408 ~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~-~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~------~~~~ 480 (591)
|++|+++.|+.-...+...+...++.+.... .++++ |+..|++||++.|.. +.++
T Consensus 100 ~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~------------------A~~~~~~Al~~~~~~~~~~~~~~~~ 161 (292)
T 1qqe_A 100 LENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAK------------------AIDCYELAGEWYAQDQSVALSNKCF 161 (292)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHH------------------HHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHH------------------HHHHHHHHHHHHHhCCChHHHHHHH
Confidence 9999999986522222222344444443332 44444 489999999999876 5679
Q ss_pred hhhHHHHHHhCCHHHHHHHHHHHHhcCCchHH-------HHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH
Q 007721 481 FRQSLLLLRLNCQKAAMRCLRLARNHSSSEHE-------RLVYEGWILYDTGHREEALSRAEKSISIERTFE 545 (591)
Q Consensus 481 ~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~-------a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~ 545 (591)
.++|.++..+|++++|+..|++++++.|++.. ++.++|.++..+|++++|+..|++++.++|+|.
T Consensus 162 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 233 (292)
T 1qqe_A 162 IKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFA 233 (292)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-----
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Confidence 99999999999999999999999999998765 578999999999999999999999999999986
No 99
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.77 E-value=3.5e-17 Score=177.31 Aligned_cols=305 Identities=15% Similarity=0.091 Sum_probs=175.0
Q ss_pred chhHHHHHHHHhhcchhhhHHHHHHHHhhhHHhhhccH---HHHHHHHHHHhhccccchhhhhHHHHHHhC-----ChHH
Q 007721 235 SNTTVMLLERLGECSTERWQRMLALHQLGCVMFEREEY---KDACYYFEAAADAGHIYSLAGLARAKYKVG-----QQYS 306 (591)
Q Consensus 235 ~~~~v~lLe~~~~~~~~~~~~~~a~~~lG~~~~~~g~~---~eA~~~f~~Al~~~~~~a~~~la~~~~~~G-----~~~~ 306 (591)
.+.+..+++++.... ...+++++|.++...|+. ++|+.+|++|++. +..++..+|.++...| ++.+
T Consensus 19 ~~~A~~~~~~aa~~g-----~~~A~~~Lg~~y~~~g~~~d~~~A~~~~~~A~~~-~~~A~~~Lg~~~~~~~~~~~~~~~~ 92 (452)
T 3e4b_A 19 TVTAQQNYQQLAELG-----YSEAQVGLADIQVGTRDPAQIKQAEATYRAAADT-SPRAQARLGRLLAAKPGATEAEHHE 92 (452)
T ss_dssp HHHHHHHHHHHHHHT-----CCTGGGTCC-----------------------------CHHHHHHHHHTC--CCHHHHHH
T ss_pred HHHHHHHHHHHHHCC-----CHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhC-CHHHHHHHHHHHHhCCCCCCcCHHH
Confidence 555666666653221 234667888888888888 8888888888887 7778888888666666 5678
Q ss_pred HHHHHHHHHHhcCC-----CHHHHHHHHhcCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhc
Q 007721 307 AYKLINSIISEHKP-----TGWMYQERSLYNLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVF 381 (591)
Q Consensus 307 A~~~~~~aI~~~~~-----~g~a~~~r~~y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l 381 (591)
|+..|.+++...+. +|.+|...+......++...+.++.+ +.++.+++++|.++...+.+++++....+..+.
T Consensus 93 A~~~~~~Aa~~g~~~A~~~Lg~~y~~~~~~~~~~~a~~~~~~a~~--~g~~~a~~~Lg~~y~~~~~~~~~~~~a~~~~~~ 170 (452)
T 3e4b_A 93 AESLLKKAFANGEGNTLIPLAMLYLQYPHSFPNVNAQQQISQWQA--AGYPEAGLAQVLLYRTQGTYDQHLDDVERICKA 170 (452)
T ss_dssp HHHHHHHHHHTTCSSCHHHHHHHHHHCGGGCTTCCHHHHHHHHHH--HTCTTHHHHHHHHHHHHTCGGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCcccCHHHHHHHHHH
Confidence 88888888886554 34444444333222455666666554 455788899999999988766666653333222
Q ss_pred --CCChHHHHHHHHHHHHcC---CHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhcccc
Q 007721 382 --KLSVDCLELRAWLFIAAD---DYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSS 456 (591)
Q Consensus 382 --~p~~~~~~~r~~~~~~~g---~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~ 456 (591)
..++.+++++|.++...| ++++|+..|+++.+.+|...+.+ ..++.+..... ..
T Consensus 171 a~~~~~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~------~~Lg~~y~~g~---------------~~ 229 (452)
T 3e4b_A 171 ALNTTDICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRV------DSVARVLGDAT---------------LG 229 (452)
T ss_dssp HTTTCTTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHH------HHHHHHHTCGG---------------GS
T ss_pred HHcCCHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHH------HHHHHHHhCCC---------------CC
Confidence 224558889999999999 99999999999999999874321 22221111110 00
Q ss_pred ccccc-hHHHHHHHHHcCCCCchhHhhhHHH-H--HHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcC-----CH
Q 007721 457 VDDIG-SLAVINQMLINDPGKSFLRFRQSLL-L--LRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTG-----HR 527 (591)
Q Consensus 457 ~~~~~-al~~~~~al~~~P~~~~~~~~~g~~-l--~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g-----~~ 527 (591)
..++. |+..|+++. |+++.+++++|.+ + ...+++++|+..|++|.+.. ++++++++|.+++ .| ++
T Consensus 230 ~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~~y~-~G~g~~~d~ 303 (452)
T 3e4b_A 230 TPDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD--QPRAELLLGKLYY-EGKWVPADA 303 (452)
T ss_dssp SCCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH-HCSSSCCCH
T ss_pred CCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHH-cCCCCCCCH
Confidence 02222 466666666 7777777777776 3 34677777777777776543 6677777777666 55 77
Q ss_pred HHHHHHHHHhhcccccHHHHHHHHHHhhhcCCCCCchhHHHHHHHHHhc
Q 007721 528 EEALSRAEKSISIERTFEAFFLKAYILADTNLDPESSTYVIQLLEEALR 576 (591)
Q Consensus 528 eeAl~~~e~ai~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (591)
++|+..|++|. .-+..|.+..|..+.+-.--+..-..-+..++.|..
T Consensus 304 ~~A~~~~~~Aa--~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~ 350 (452)
T 3e4b_A 304 KAAEAHFEKAV--GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAAR 350 (452)
T ss_dssp HHHHHHHHTTT--TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHh--CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHh
Confidence 77777777777 444447777776666533223344455555665554
No 100
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.76 E-value=4.1e-17 Score=170.39 Aligned_cols=269 Identities=11% Similarity=0.010 Sum_probs=198.1
Q ss_pred HHHHHHhhhHHhhhccHHHHHHHHHHHhhcccc-------chhhhhHHHHHHhCChHHHHHHHHHHHHhcCCC-------
Q 007721 256 MLALHQLGCVMFEREEYKDACYYFEAAADAGHI-------YSLAGLARAKYKVGQQYSAYKLINSIISEHKPT------- 321 (591)
Q Consensus 256 ~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~~-------~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~------- 321 (591)
...+..+|.++...|++++|...+++++...+. .++..+|.++...|+++.|...+.+++...+..
T Consensus 14 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 93 (373)
T 1hz4_A 14 AEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYAL 93 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 344566777888888888888888888776321 145567777888888888888888887754322
Q ss_pred ------HHHHHHHHhcCCcHHHHHHHHHHHHcC--------CCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC---
Q 007721 322 ------GWMYQERSLYNLGREKIVDLNYASELD--------PTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS--- 384 (591)
Q Consensus 322 ------g~a~~~r~~y~~~~eA~~dl~~Ai~Ld--------P~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~--- 384 (591)
|.++..+|.+ ++|+..|++++++. |....++.++|.++...|++++|+..+++++++.|.
T Consensus 94 ~~~~~la~~~~~~G~~---~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 170 (373)
T 1hz4_A 94 WSLIQQSEILFAQGFL---QTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQP 170 (373)
T ss_dssp HHHHHHHHHHHHTTCH---HHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCG
T ss_pred HHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCc
Confidence 3333333333 88888888888875 455678899999999999999999999999999874
Q ss_pred ---hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchh-hhhhchHhHHHHHHHhhhcccCchhhhhhhhhcccccccc
Q 007721 385 ---VDCLELRAWLFIAADDYESALRDTLALLALESNYMM-FHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDI 460 (591)
Q Consensus 385 ---~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~-~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~ 460 (591)
...+.++|.++...|++++|+..+++++++.+.... ..........+..+.....++++
T Consensus 171 ~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----------------- 233 (373)
T 1hz4_A 171 QQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAA----------------- 233 (373)
T ss_dssp GGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHH-----------------
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHCCCHHH-----------------
Confidence 234667899999999999999999999998654210 00000000011111222333333
Q ss_pred chHHHHHHHHHcCCCCch----hHhhhHHHHHHhCCHHHHHHHHHHHHhcCCc------hHHHHHhHHHHHHHcCCHHHH
Q 007721 461 GSLAVINQMLINDPGKSF----LRFRQSLLLLRLNCQKAAMRCLRLARNHSSS------EHERLVYEGWILYDTGHREEA 530 (591)
Q Consensus 461 ~al~~~~~al~~~P~~~~----~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~------~~~a~~~~G~~l~~~g~~eeA 530 (591)
|...+++++...|.... .+..+|.++..+|++++|+..+++++...+. ..+++..+|.++..+|++++|
T Consensus 234 -A~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 312 (373)
T 1hz4_A 234 -AANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDA 312 (373)
T ss_dssp -HHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred -HHHHHHhCCCCCCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHhCCHHHH
Confidence 47778888888776532 4678999999999999999999999988654 346899999999999999999
Q ss_pred HHHHHHhhcccccHH
Q 007721 531 LSRAEKSISIERTFE 545 (591)
Q Consensus 531 l~~~e~ai~l~~~~~ 545 (591)
...+++|+.+.+...
T Consensus 313 ~~~l~~al~~~~~~g 327 (373)
T 1hz4_A 313 QRVLLDALKLANRTG 327 (373)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcccc
Confidence 999999999876543
No 101
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.76 E-value=1.1e-18 Score=153.49 Aligned_cols=90 Identities=13% Similarity=0.135 Sum_probs=82.7
Q ss_pred cCCCCCCceEEEEcCeEEEhhHHHHhhcCHHHHHhhcCCCCCCCCceeEecCCCCCHHHHHHHHHHHhcCCCCCCChhHH
Q 007721 49 LSLEEDDSVTFCVRDKEISFVRNKIASLSSPFKAMLYGGFVESKRKTIDFSHDGVSVEGLRAVEVYTRTSRVDLFCPGIV 128 (591)
Q Consensus 49 ~~~~~~~~V~f~v~g~~~~aHr~iLaa~S~yF~amf~~~~~Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~~~~~~~~~v 128 (591)
..++..++|+|.|+|+.|+|||.||+++|+||++||+++ ..+|++ +++++++|+.+|+|+|||++..++.+++
T Consensus 26 ~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~-----~~~i~l--~~~~~~~f~~~l~~~Ytg~~~~~~~~~~ 98 (116)
T 3fkc_A 26 RGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA-----GQVVEL--SFIRAEIFAEILNYIYSSKIVRVRSDLL 98 (116)
T ss_dssp HHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC-----CSEEEE--CSSCHHHHHHHHHHHTTSCCCSCCHHHH
T ss_pred HhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEe--CCCCHHHHHHHHHhhcCCCcCCCCHHHH
Confidence 345677789999999999999999999999999999986 568999 9999999999999999999933999999
Q ss_pred HHHHHHHhhhChHHHHH
Q 007721 129 LELLSFANRFCCEEMKS 145 (591)
Q Consensus 129 ~~lL~~A~~~~i~~L~~ 145 (591)
.+++.+|++|+++.|++
T Consensus 99 ~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 99 DELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HHHHHHHHHHTCHHHHT
T ss_pred HHHHHHHHHhCccccCc
Confidence 99999999999999974
No 102
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.75 E-value=1.3e-16 Score=164.94 Aligned_cols=237 Identities=12% Similarity=0.081 Sum_probs=176.0
Q ss_pred HhCChH-HHHHHHHHHHHhcCCCHHHHHHHHhcC----C----------cHHHHHHHHHHHHcCCCChHHHHhHHHHHHH
Q 007721 300 KVGQQY-SAYKLINSIISEHKPTGWMYQERSLYN----L----------GREKIVDLNYASELDPTLSFPYKYRAVAKME 364 (591)
Q Consensus 300 ~~G~~~-~A~~~~~~aI~~~~~~g~a~~~r~~y~----~----------~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~ 364 (591)
..|.+. +|+..+..++..+|++..++..|+... . .++++..+++++..+|.+..+|.+|+.++..
T Consensus 41 ~~~e~s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~ 120 (331)
T 3dss_A 41 QAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSR 120 (331)
T ss_dssp HTTCCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhc
Confidence 344443 466666666666666666665554321 0 2678999999999999999999999999999
Q ss_pred hCC--HHHHHHHHHHHHhcCC-ChHHHHHHHHHHHHcCC-HHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcc
Q 007721 365 EGQ--IRAAISEIDRIIVFKL-SVDCLELRAWLFIAADD-YESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRS 440 (591)
Q Consensus 365 l~~--~~eAl~~~~~al~l~p-~~~~~~~r~~~~~~~g~-~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~ 440 (591)
+++ ++++++.++++|+++| ++.+|..|+++...+|+ +++++..++++++++|.+ -.+.+.++.+......
T Consensus 121 l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N------~SAW~~R~~ll~~l~~ 194 (331)
T 3dss_A 121 LPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSN------YSSWHYRSCLLPQLHP 194 (331)
T ss_dssp CSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCC------HHHHHHHHHHHHHHSC
T ss_pred cCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHHHhhh
Confidence 995 8999999999999999 58999999999999999 699999999999999988 3444444444333311
Q ss_pred cCchhhhhhhhhccccc--ccc-chHHHHHHHHHcCCCCchhHhhhHHHHHHh-----------CCHHHHHHHHHHHHhc
Q 007721 441 WSPADCWIKLYDRWSSV--DDI-GSLAVINQMLINDPGKSFLRFRQSLLLLRL-----------NCQKAAMRCLRLARNH 506 (591)
Q Consensus 441 ~~~a~~~~~l~~~~~~~--~~~-~al~~~~~al~~~P~~~~~~~~~g~~l~~l-----------~~~~eA~~~~~~Al~l 506 (591)
...+. ..... +.+ +++..++++|..+|++..+|+.+.-++.+. +..++++..+++++++
T Consensus 195 ~~~~~-------~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~~~~~~~~~~~~~~~l~~el~~~~elle~ 267 (331)
T 3dss_A 195 QPDSG-------PQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGAGSGRCELSVEKSTVLQSELESCKELQEL 267 (331)
T ss_dssp CC-------------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHSSSCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccc-------cccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHhh
Confidence 11100 00000 111 258899999999999999997554444444 4588999999999999
Q ss_pred CCchHHHHHhHHHHHH---HcCCHHHHHHHHHHhhcccccHHHHHH
Q 007721 507 SSSEHERLVYEGWILY---DTGHREEALSRAEKSISIERTFEAFFL 549 (591)
Q Consensus 507 ~p~~~~a~~~~G~~l~---~~g~~eeAl~~~e~ai~l~~~~~~~~~ 549 (591)
+|++...+.....+.- ..|..++....+.+.++++|-=.-|+.
T Consensus 268 ~pd~~w~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Dp~r~~~y~ 313 (331)
T 3dss_A 268 EPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD 313 (331)
T ss_dssp CTTCHHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHCGGGHHHHH
T ss_pred CcccchHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCcchhhHHH
Confidence 9999665544443322 368899999999999999998776654
No 103
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.74 E-value=1.8e-16 Score=171.68 Aligned_cols=278 Identities=14% Similarity=0.048 Sum_probs=191.6
Q ss_pred hhHHHHHHHHhhcchhhhHHHHHHHHhhhHHhhhc-----cHHHHHHHHHHHhhccccchhhhhHHHHHHhCChH---HH
Q 007721 236 NTTVMLLERLGECSTERWQRMLALHQLGCVMFERE-----EYKDACYYFEAAADAGHIYSLAGLARAKYKVGQQY---SA 307 (591)
Q Consensus 236 ~~~v~lLe~~~~~~~~~~~~~~a~~~lG~~~~~~g-----~~~eA~~~f~~Al~~~~~~a~~~la~~~~~~G~~~---~A 307 (591)
..+..+++++... ...+++++|.++...+ ++++|+.+|++|++.++..++..+|.++...++.. .+
T Consensus 55 ~~A~~~~~~A~~~------~~~A~~~Lg~~~~~~~~~~~~~~~~A~~~~~~Aa~~g~~~A~~~Lg~~y~~~~~~~~~~~a 128 (452)
T 3e4b_A 55 KQAEATYRAAADT------SPRAQARLGRLLAAKPGATEAEHHEAESLLKKAFANGEGNTLIPLAMLYLQYPHSFPNVNA 128 (452)
T ss_dssp ----------------------CHHHHHHHHHTC--CCHHHHHHHHHHHHHHHHTTCSSCHHHHHHHHHHCGGGCTTCCH
T ss_pred HHHHHHHHHHHhC------CHHHHHHHHHHHHhCCCCCCcCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhCCCCCCCHHH
Confidence 4556666665422 3457889999666655 88999999999999999999999999988877643 35
Q ss_pred HHHHHHHHHhcCC-----CHHHHHHHHhcCCc-HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhC---CHHHHHHHHHHH
Q 007721 308 YKLINSIISEHKP-----TGWMYQERSLYNLG-REKIVDLNYASELDPTLSFPYKYRAVAKMEEG---QIRAAISEIDRI 378 (591)
Q Consensus 308 ~~~~~~aI~~~~~-----~g~a~~~r~~y~~~-~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~---~~~eAl~~~~~a 378 (591)
+..+.++...... +|.+|...+.+... +++...+..|...+|. +++++|.++...| ++++|+..|+++
T Consensus 129 ~~~~~~a~~~g~~~a~~~Lg~~y~~~~~~~~~~~~a~~~~~~a~~~~~~---a~~~Lg~~~~~~g~~~~~~~A~~~~~~a 205 (452)
T 3e4b_A 129 QQQISQWQAAGYPEAGLAQVLLYRTQGTYDQHLDDVERICKAALNTTDI---CYVELATVYQKKQQPEQQAELLKQMEAG 205 (452)
T ss_dssp HHHHHHHHHHTCTTHHHHHHHHHHHHTCGGGGHHHHHHHHHHHTTTCTT---HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHcCCHH---HHHHHHHHHHHcCCcccHHHHHHHHHHH
Confidence 6666666554332 45555555443222 4455556677777666 9999999999999 999999999999
Q ss_pred HhcCCC-hHHHHHHHHHHHHc----CCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHH-H--hhhcccCchhhhhhh
Q 007721 379 IVFKLS-VDCLELRAWLFIAA----DDYESALRDTLALLALESNYMMFHGRVSGDHLVKLL-N--HHVRSWSPADCWIKL 450 (591)
Q Consensus 379 l~l~p~-~~~~~~r~~~~~~~----g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l-~--~~~~~~~~a~~~~~l 450 (591)
++..|. ...+++.|.+|... +|+++|+..|+++. |+++ .+...++.+ . ...+++++
T Consensus 206 a~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~------~a~~~Lg~~~~~~~~~~d~~~------- 269 (452)
T 3e4b_A 206 VSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYP------ASWVSLAQLLYDFPELGDVEQ------- 269 (452)
T ss_dssp HHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGST------HHHHHHHHHHHHSGGGCCHHH-------
T ss_pred HHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCH------HHHHHHHHHHHhCCCCCCHHH-------
Confidence 999885 56667888888666 79999999999998 7763 333333322 1 11222222
Q ss_pred hhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhC-----CHHHHHHHHHHHHhcCCchHHHHHhHHHHHHH--
Q 007721 451 YDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLN-----CQKAAMRCLRLARNHSSSEHERLVYEGWILYD-- 523 (591)
Q Consensus 451 ~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~-----~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~-- 523 (591)
|+..|+++++ ++++.+++++|.++. .| ++++|+.+|++|. |.++++++++|.++..
T Consensus 270 -----------A~~~~~~Aa~--~g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~G~ 332 (452)
T 3e4b_A 270 -----------MMKYLDNGRA--ADQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYRRGY 332 (452)
T ss_dssp -----------HHHHHHHHHH--TTCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHHTTT
T ss_pred -----------HHHHHHHHHH--CCCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHCCC
Confidence 4778888774 458888888888887 56 8888888888888 8888888888877666
Q ss_pred --cCCHHHHHHHHHHhhcccccHHHHHHHHHHhhh
Q 007721 524 --TGHREEALSRAEKSISIERTFEAFFLKAYILAD 556 (591)
Q Consensus 524 --~g~~eeAl~~~e~ai~l~~~~~~~~~~~~~~~~ 556 (591)
..++++|+..|++|.+.. +.+|.+..|+.+..
T Consensus 333 g~~~d~~~A~~~~~~Aa~~g-~~~A~~~Lg~~y~~ 366 (452)
T 3e4b_A 333 LGKVYPQKALDHLLTAARNG-QNSADFAIAQLFSQ 366 (452)
T ss_dssp TSSCCHHHHHHHHHHHHTTT-CTTHHHHHHHHHHS
T ss_pred CCCcCHHHHHHHHHHHHhhC-hHHHHHHHHHHHHh
Confidence 338888888888888753 23467777777665
No 104
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.74 E-value=1.1e-17 Score=161.40 Aligned_cols=190 Identities=16% Similarity=0.024 Sum_probs=127.3
Q ss_pred hhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHH
Q 007721 292 AGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLYNLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAA 371 (591)
Q Consensus 292 ~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eA 371 (591)
...|..++..|++++|+..|.+++...|+.+.++..++.-.... . .+..+.++|.++..+|++++|
T Consensus 8 ~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~-~-------------~~~~~~~lg~~~~~~g~~~~A 73 (208)
T 3urz_A 8 LQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSE-I-------------SSKLATELALAYKKNRNYDKA 73 (208)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSH-H-------------HHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhh-h-------------hHHHHHHHHHHHHHCCCHHHH
Confidence 34555666677766666666666666555555554432110000 0 012234499999999999999
Q ss_pred HHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhh
Q 007721 372 ISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKL 450 (591)
Q Consensus 372 l~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l 450 (591)
+..|+++|+++|+ +..+.++|.++..+|++++|+..|+++++++|++..++.+.+ .+.......+.+
T Consensus 74 ~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg------~~~~~~~~~~~~------ 141 (208)
T 3urz_A 74 YLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLG------NYYYLTAEQEKK------ 141 (208)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHH------HHHHHHHHHHHH------
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHH------HHHHHHhHHHHH------
Confidence 9999999999995 888999999999999999999999999999999865333222 211111110011
Q ss_pred hhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHH
Q 007721 451 YDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGW 519 (591)
Q Consensus 451 ~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~ 519 (591)
.+...+.+++..+|. ..+++++|.++..+|++++|+..|++|++++|+. ++..++.-
T Consensus 142 ----------~~~~~~~~~~~~~~~-~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~-~~~~~l~~ 198 (208)
T 3urz_A 142 ----------KLETDYKKLSSPTKM-QYARYRDGLSKLFTTRYEKARNSLQKVILRFPST-EAQKTLDK 198 (208)
T ss_dssp ----------HHHHHHC---CCCHH-HHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH-HHHHHHHH
T ss_pred ----------HHHHHHHHHhCCCch-hHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH-HHHHHHHH
Confidence 123455565544332 3478899999999999999999999999999985 34343433
No 105
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.73 E-value=1.6e-17 Score=147.68 Aligned_cols=120 Identities=13% Similarity=0.044 Sum_probs=105.2
Q ss_pred HHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhcc
Q 007721 376 DRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRW 454 (591)
Q Consensus 376 ~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~ 454 (591)
.|+..+||+ .+.+.++|..+...|+|++|+..|+++++++|++
T Consensus 3 ar~a~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~------------------------------------ 46 (126)
T 4gco_A 3 ARLAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPEN------------------------------------ 46 (126)
T ss_dssp ----CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------------------------------------
T ss_pred hHHHHHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------------------------------------
Confidence 356678996 6888899999999999999999888888888765
Q ss_pred ccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHH
Q 007721 455 SSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRA 534 (591)
Q Consensus 455 ~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~ 534 (591)
+.+|+++|.++.++|++++|+..+++|++++|+++++++++|.++..+|++++|+..|
T Consensus 47 ----------------------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~ 104 (126)
T 4gco_A 47 ----------------------AILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMREWSKAQRAY 104 (126)
T ss_dssp ----------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred ----------------------HHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCCCHHHHHHHH
Confidence 4678999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccHH-HHHHHHHH
Q 007721 535 EKSISIERTFE-AFFLKAYI 553 (591)
Q Consensus 535 e~ai~l~~~~~-~~~~~~~~ 553 (591)
++|++++|++. +....+-+
T Consensus 105 ~~al~l~P~~~~a~~~l~~~ 124 (126)
T 4gco_A 105 EDALQVDPSNEEAREGVRNC 124 (126)
T ss_dssp HHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHCcCCHHHHHHHHHh
Confidence 99999999987 66555443
No 106
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.73 E-value=1.5e-16 Score=155.23 Aligned_cols=190 Identities=9% Similarity=-0.011 Sum_probs=146.3
Q ss_pred ChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-h---HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhch
Q 007721 351 LSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-V---DCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVS 426 (591)
Q Consensus 351 ~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~---~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~ 426 (591)
.+.+++++|..+...|++++|+..|+++++..|+ + .+++.+|.++..+|++++|+..|+++++++|++... ..
T Consensus 3 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~---~~ 79 (225)
T 2yhc_A 3 PPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNI---DY 79 (225)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTH---HH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcH---HH
Confidence 4678899999999999999999999999999885 2 567889999999999999999999999999987421 01
Q ss_pred HhHHHHHHHhhhcccCchhhhhhhhhccccccccc-hHHHHHHHHHcCCCCchhH-----------------hhhHHHHH
Q 007721 427 GDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIG-SLAVINQMLINDPGKSFLR-----------------FRQSLLLL 488 (591)
Q Consensus 427 ~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~-al~~~~~al~~~P~~~~~~-----------------~~~g~~l~ 488 (591)
+...++.+...... .....|.++...+...++.. |+..++++++.+|+++.++ +.+|.++.
T Consensus 80 a~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~ 158 (225)
T 2yhc_A 80 VMYMRGLTNMALDD-SALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYT 158 (225)
T ss_dssp HHHHHHHHHHHHHC---------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhh-hhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223322221110 01111223333333344454 7899999999999999776 67899999
Q ss_pred HhCCHHHHHHHHHHHHhcCCchH---HHHHhHHHHHHHcCCHHHHHHHHHHhhcccccH
Q 007721 489 RLNCQKAAMRCLRLARNHSSSEH---ERLVYEGWILYDTGHREEALSRAEKSISIERTF 544 (591)
Q Consensus 489 ~l~~~~eA~~~~~~Al~l~p~~~---~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~ 544 (591)
+.|++++|+..|+++++..|+++ ++++.+|.+++.+|++++|++.++++....|+.
T Consensus 159 ~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~~~~~ 217 (225)
T 2yhc_A 159 ERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAANSSNT 217 (225)
T ss_dssp HHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCCSCC
T ss_pred HcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCCc
Confidence 99999999999999999999976 789999999999999999999999998887763
No 107
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.73 E-value=1.2e-15 Score=167.94 Aligned_cols=316 Identities=10% Similarity=0.001 Sum_probs=221.1
Q ss_pred ccchhHHHHHHHHhhcchhhhHHHHHHHHhhhHHhhhccHHHHHHHHHHHhhccc-cchhhhhHH-HHHHhCChHHHHH-
Q 007721 233 RVSNTTVMLLERLGECSTERWQRMLALHQLGCVMFEREEYKDACYYFEAAADAGH-IYSLAGLAR-AKYKVGQQYSAYK- 309 (591)
Q Consensus 233 ~r~~~~v~lLe~~~~~~~~~~~~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~-~~a~~~la~-~~~~~G~~~~A~~- 309 (591)
.+.+.+..++++++...|.. ...|..++......|++++|...|++|+...| ...+...++ +....|+...|.+
T Consensus 26 ~~~~~a~~~~e~al~~~P~~---~~~w~~~~~~~~~~~~~~~a~~~~~ral~~~p~~~lw~~~~~~~~~~~~~~~~a~~~ 102 (530)
T 2ooe_A 26 QPIDKARKTYERLVAQFPSS---GRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKEK 102 (530)
T ss_dssp SCHHHHHHHHHHHHTTCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHTTTSTTHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHccchhhHHHH
Confidence 34667888999988754443 46678888888999999999999999999854 334555554 3345677766654
Q ss_pred ---HHHHHHHh---cCCCHHHHHHHHhc-------------CCcHHHHHHHHHHHHcCCCChH--HHHhHHH--------
Q 007721 310 ---LINSIISE---HKPTGWMYQERSLY-------------NLGREKIVDLNYASELDPTLSF--PYKYRAV-------- 360 (591)
Q Consensus 310 ---~~~~aI~~---~~~~g~a~~~r~~y-------------~~~~eA~~dl~~Ai~LdP~~~~--ay~~rg~-------- 360 (591)
.|++++.. +++.+.+|.....+ +..++|...|+++++ .|.... .|...+.
T Consensus 103 ~~~~~~~al~~~g~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~a~~~y~~al~-~P~~~~~~~~~~~~~~e~~~~~~ 181 (530)
T 2ooe_A 103 MAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCV-NPMINIEQLWRDYNKYEEGINIH 181 (530)
T ss_dssp HHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHSCCCSSTTHHHHHHHHHHHHHHHTT-SCCTTHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHCCCCcccHHHHHHHHHHHhcCCCcccHHHHhHHHHHHHHHHHHHh-chhhhHHHHHHHHHHHHHhhchh
Confidence 67777653 45555555432211 122789999999999 576532 2211100
Q ss_pred -------------------------------------------------------HHHHh------CC----HHHHHHHH
Q 007721 361 -------------------------------------------------------AKMEE------GQ----IRAAISEI 375 (591)
Q Consensus 361 -------------------------------------------------------~l~~l------~~----~~eAl~~~ 375 (591)
+..+. ++ .+.|+..|
T Consensus 182 ~~~~~l~~~~~~~~~A~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~w~~~~~~e~~~~~~~~~~~~~~~~a~~~y 261 (530)
T 2ooe_A 182 LAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAY 261 (530)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCSSSCCCCCC--CCHHHHHHHHHHHHHHHHHCSSCCSCSHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHcCCccCCcchhHHHHHHHHH
Confidence 00000 11 13667788
Q ss_pred HHHHhcCCC-hHHHHHHHHHHHH-------cCCHH-------HHHHHHHHHHh-cCCcchhhhhhchHhHHHHHHHhhhc
Q 007721 376 DRIIVFKLS-VDCLELRAWLFIA-------ADDYE-------SALRDTLALLA-LESNYMMFHGRVSGDHLVKLLNHHVR 439 (591)
Q Consensus 376 ~~al~l~p~-~~~~~~r~~~~~~-------~g~~~-------~A~~d~~~al~-l~P~~~~~~~~~~~~~~~~~l~~~~~ 439 (591)
+++|..+|+ ++.|...|.++.. +|+++ +|+..|++|++ ++|++. .+....+.+....+
T Consensus 262 ~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~------~l~~~~~~~~~~~g 335 (530)
T 2ooe_A 262 EQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNM------LLYFAYADYEESRM 335 (530)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCH------HHHHHHHHHHHHTT
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccH------HHHHHHHHHHHhcC
Confidence 888888885 7777777777665 78876 88888888887 788763 22222333333333
Q ss_pred ccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCc-hhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHH
Q 007721 440 SWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKS-FLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEG 518 (591)
Q Consensus 440 ~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~-~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G 518 (591)
++++ |..+|+++|+++|.++ .+|.+.|.++.++|+.++|+..|++|++..|.....+...|
T Consensus 336 ~~~~------------------A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a 397 (530)
T 2ooe_A 336 KYEK------------------VHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAA 397 (530)
T ss_dssp CHHH------------------HHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHH
T ss_pred CHHH------------------HHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHH
Confidence 3333 4889999999999985 69999999999999999999999999999999888888888
Q ss_pred HHHH-HcCCHHHHHHHHHHhhcccccHH-HHHHHHHHhhhcCCCCCchhHHHHHHHHHhc-CCCC
Q 007721 519 WILY-DTGHREEALSRAEKSISIERTFE-AFFLKAYILADTNLDPESSTYVIQLLEEALR-CPSD 580 (591)
Q Consensus 519 ~~l~-~~g~~eeAl~~~e~ai~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 580 (591)
++.+ ..|++++|...|++|+++.|+.. .+...|..+.. -..-..+..++|.|+. ||.+
T Consensus 398 ~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~----~g~~~~Ar~~~~~al~~~~~~ 458 (530)
T 2ooe_A 398 LMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSH----LNEDNNTRVLFERVLTSGSLP 458 (530)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT----TTCHHHHHHHHHHHHHSCCSC
T ss_pred HHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHh----CCCHhhHHHHHHHHHhccCCC
Confidence 7744 59999999999999999999876 44444433322 2345678889999986 4543
No 108
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.73 E-value=4.3e-17 Score=162.01 Aligned_cols=189 Identities=10% Similarity=-0.055 Sum_probs=149.2
Q ss_pred HHHHHHHHHHHHcCCCC---hHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC----hHHHHHHHHHHHH--------cC
Q 007721 335 REKIVDLNYASELDPTL---SFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS----VDCLELRAWLFIA--------AD 399 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~---~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~----~~~~~~r~~~~~~--------~g 399 (591)
++|+..|+++++.+|++ +.+++++|.++..+|++++|+..|++++++.|+ +.+++.+|.++.. +|
T Consensus 32 ~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~ 111 (261)
T 3qky_A 32 DRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQT 111 (261)
T ss_dssp HHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCH
T ss_pred HHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccch
Confidence 77888888999999998 899999999999999999999999999999883 4567889999999 99
Q ss_pred CHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccc-hHHHHHHHHHcCCC---
Q 007721 400 DYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIG-SLAVINQMLINDPG--- 475 (591)
Q Consensus 400 ~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~-al~~~~~al~~~P~--- 475 (591)
++++|+..|+++++++|++.... .....+....... +..+..++..+...+++. |+..+++++...|.
T Consensus 112 ~~~~A~~~~~~~l~~~p~~~~~~------~a~~~~~~~~~~~--~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~ 183 (261)
T 3qky_A 112 DTRKAIEAFQLFIDRYPNHELVD------DATQKIRELRAKL--ARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPW 183 (261)
T ss_dssp HHHHHHHHHHHHHHHCTTCTTHH------HHHHHHHHHHHHH--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTT
T ss_pred hHHHHHHHHHHHHHHCcCchhHH------HHHHHHHHHHHHH--HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCch
Confidence 99999999999999999874321 1111111111111 222445555555556666 79999999999999
Q ss_pred CchhHhhhHHHHHHh----------CCHHHHHHHHHHHHhcCCchH---HHHHhHHHHHHHcCCHHHHH
Q 007721 476 KSFLRFRQSLLLLRL----------NCQKAAMRCLRLARNHSSSEH---ERLVYEGWILYDTGHREEAL 531 (591)
Q Consensus 476 ~~~~~~~~g~~l~~l----------~~~~eA~~~~~~Al~l~p~~~---~a~~~~G~~l~~~g~~eeAl 531 (591)
.+.+++++|.++..+ |++++|+..|+++++..|+++ ++...++.++..+|+++++.
T Consensus 184 ~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~~~~~~~~~~~~~ 252 (261)
T 3qky_A 184 ADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSPLLRTAEELYTRARQRLTELEGDA 252 (261)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHhhhhh
Confidence 456999999999988 999999999999999999995 55666677766666665543
No 109
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.72 E-value=5e-17 Score=180.62 Aligned_cols=159 Identities=9% Similarity=-0.054 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLA 413 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~ 413 (591)
++|+..|+++++++|+++.+|.++|.++..+|++++|+..|+++++++|+ +..+.++|.++..+|++++|+..|+++++
T Consensus 6 ~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 85 (568)
T 2vsy_A 6 PRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASD 85 (568)
T ss_dssp ---------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 78999999999999999999999999999999999999999999999996 78888999999999999999999888888
Q ss_pred cCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCH
Q 007721 414 LESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQ 493 (591)
Q Consensus 414 l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~ 493 (591)
++|++ +.+++++|.++..+|++
T Consensus 86 ~~p~~----------------------------------------------------------~~~~~~la~~~~~~g~~ 107 (568)
T 2vsy_A 86 AAPEH----------------------------------------------------------PGIALWLGHALEDAGQA 107 (568)
T ss_dssp HCTTC----------------------------------------------------------HHHHHHHHHHHHHTTCH
T ss_pred cCCCC----------------------------------------------------------HHHHHHHHHHHHHcCCH
Confidence 88865 34677888899999999
Q ss_pred HHHHHHHHHHHhcCCchHHHHHhHHHHHHHc---CCHHHHHHHHHHhhcccccHH-HHHHHH
Q 007721 494 KAAMRCLRLARNHSSSEHERLVYEGWILYDT---GHREEALSRAEKSISIERTFE-AFFLKA 551 (591)
Q Consensus 494 ~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~---g~~eeAl~~~e~ai~l~~~~~-~~~~~~ 551 (591)
++|+..|++|++++|++++++.++|.++..+ |++++|++.|+++++++|+.. +|++.+
T Consensus 108 ~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 169 (568)
T 2vsy_A 108 EAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVGAVEPFAFLS 169 (568)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCCSCHHHHTT
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCcccChHHHhC
Confidence 9999999999999999999999999999999 999999999999999988876 666554
No 110
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.72 E-value=1.2e-17 Score=168.48 Aligned_cols=198 Identities=12% Similarity=0.040 Sum_probs=161.5
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhH-------HHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHH----------------
Q 007721 335 REKIVDLNYASELDPTLSFPYKYR-------AVAKMEEGQIRAAISEIDRIIVFKLS-VDCLEL---------------- 390 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~r-------g~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~---------------- 390 (591)
..|...|.+|+++||+.+++|.+| +.++..++++.+++..+++++++.|+ ...++.
T Consensus 23 ~~A~~~F~~a~~~dP~~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~l~p~~l~a~~~~~g~y~~~~~~v~~r~ 102 (282)
T 4f3v_A 23 ARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTLNARIAIGGLYGDITYPVTSPL 102 (282)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTTCCGGGGCCEEECCTTTCCCEEECSSHH
T ss_pred HHHHHHHHHHHHhChhhhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhhccCCcccccccccCCHh
Confidence 778888999999999999999999 89999999999999999999998885 232222
Q ss_pred -----HHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHH
Q 007721 391 -----RAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAV 465 (591)
Q Consensus 391 -----r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~ 465 (591)
.+.++...|+|++|.+.|+.++..+|++ . +.+.++.+....++|++| +..
T Consensus 103 dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~------~-~~~~~a~l~~~~~r~~dA------------------~~~ 157 (282)
T 4f3v_A 103 AITMGFAACEAAQGNYADAMEALEAAPVAGSEH------L-VAWMKAVVYGAAERWTDV------------------IDQ 157 (282)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHH------H-HHHHHHHHHHHTTCHHHH------------------HHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCch------H-HHHHHHHHHHHcCCHHHH------------------HHH
Confidence 5677889999999999999999988865 4 667777788888888888 556
Q ss_pred HHHHHHcC-CCC-chhHhhhHHHHHHhCCHHHHHHHHHHHHhcC--Cc-hHHHHHhHHHHHHHcCCHHHHHHHHHHhhcc
Q 007721 466 INQMLIND-PGK-SFLRFRQSLLLLRLNCQKAAMRCLRLARNHS--SS-EHERLVYEGWILYDTGHREEALSRAEKSISI 540 (591)
Q Consensus 466 ~~~al~~~-P~~-~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~--p~-~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l 540 (591)
+++++... |.. ..+++++|.++..+|++++|++.|++|+.-. |. ..++++++|++|..+|+.+||...|++++++
T Consensus 158 l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~ 237 (282)
T 4f3v_A 158 VKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTT 237 (282)
T ss_dssp HTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 66555542 221 4589999999999999999999999999655 66 8899999999999999999999999999999
Q ss_pred cccHHHHHHHHHHhhhcCCCC
Q 007721 541 ERTFEAFFLKAYILADTNLDP 561 (591)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~ 561 (591)
+|+ ++- .-+|.|.+.=|
T Consensus 238 ~P~-~~~---~~aL~~~~~~~ 254 (282)
T 4f3v_A 238 HPE-PKV---AAALKDPSYRL 254 (282)
T ss_dssp SCC-HHH---HHHHHCTTCCC
T ss_pred CCc-HHH---HHHHhCCCCCC
Confidence 999 531 23455655433
No 111
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.72 E-value=1.1e-17 Score=153.96 Aligned_cols=68 Identities=9% Similarity=-0.115 Sum_probs=42.5
Q ss_pred hhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH
Q 007721 478 FLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFE 545 (591)
Q Consensus 478 ~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~ 545 (591)
.+|+++|.++..+|++++|+..|++|++++|+++++++++|.++..+|++++|+..|++|+++.|+.+
T Consensus 71 ~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 71 DYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 45556666666666666666666666666666666666666666666666666666666666666554
No 112
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.71 E-value=6.5e-16 Score=160.51 Aligned_cols=177 Identities=11% Similarity=0.003 Sum_probs=150.8
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhC-CHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHc-C-CHHHHHHHHHH
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEG-QIRAAISEIDRIIVFKLS-VDCLELRAWLFIAA-D-DYESALRDTLA 410 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~-~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~-g-~~~~A~~d~~~ 410 (591)
++|+..+++++.+||++..+|++|+.++..+| .+++++..++++|..+|+ +.+|+.|++++..+ + ++++++..+++
T Consensus 71 e~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k 150 (349)
T 3q7a_A 71 ERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHG 150 (349)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHH
Confidence 68999999999999999999999999999999 599999999999999995 89999999999988 8 99999999999
Q ss_pred HHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHh
Q 007721 411 LLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRL 490 (591)
Q Consensus 411 al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l 490 (591)
+++++|++.. +...++-+......++.+.. . .-.+++..++++|+.+|+|-.+|++|+.++.++
T Consensus 151 ~L~~dpkNy~------AW~~R~wvl~~l~~~~~~~~--~--------~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l 214 (349)
T 3q7a_A 151 SLLPDPKNYH------TWAYLHWLYSHFSTLGRISE--A--------QWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSR 214 (349)
T ss_dssp HTSSCTTCHH------HHHHHHHHHHHHHHTTCCCH--H--------HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTS
T ss_pred HHHhCCCCHH------HHHHHHHHHHHhccccccch--h--------hHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Confidence 9999998843 33434433333333442100 0 001248899999999999999999999999999
Q ss_pred CC-------HHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCH
Q 007721 491 NC-------QKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHR 527 (591)
Q Consensus 491 ~~-------~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~ 527 (591)
++ .+++++.+++++.++|+|..+.+++.+++...|+-
T Consensus 215 ~~~~~~~~~~~eELe~~~~aI~~~P~n~SaW~Ylr~Ll~~~~~~ 258 (349)
T 3q7a_A 215 PGAETSSRSLQDELIYILKSIHLIPHNVSAWNYLRGFLKHFSLP 258 (349)
T ss_dssp TTCCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCC
T ss_pred cccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCC
Confidence 98 78999999999999999999999999999998874
No 113
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.71 E-value=2.3e-18 Score=179.36 Aligned_cols=202 Identities=12% Similarity=-0.008 Sum_probs=160.3
Q ss_pred hhHHhhhccHHHHHHHHHH----HhhccccchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcCCcHHHH
Q 007721 263 GCVMFEREEYKDACYYFEA----AADAGHIYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLYNLGREKI 338 (591)
Q Consensus 263 G~~~~~~g~~~eA~~~f~~----Al~~~~~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~~~~eA~ 338 (591)
|.++...+.+++|+..+.. ++.++|.+++...|.... ...++ ....+.. .....++|+
T Consensus 72 g~~~~~~~~~e~al~~~~~Ge~~~l~i~p~~ayg~~g~~~~----------------~i~~~-~~l~f~~-~L~~~~~A~ 133 (336)
T 1p5q_A 72 GENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKF----------------QIPPN-AELKYEL-HLKSFEKAK 133 (336)
T ss_dssp GGGGTCCHHHHHHHTTCCTTCEEEEEECTTTTTTTTCBGGG----------------TBCSS-CCEEEEE-EEEEEECCC
T ss_pred CCccccchHHHHHHhcCCCCCeEEEEECCccccCcCCCCcc----------------CCCCC-CeEEEEE-EEeeccccc
Confidence 3444456688999988888 788877666554443211 00111 0000000 011126777
Q ss_pred HHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCCh----------------HHHHHHHHHHHHcCCHH
Q 007721 339 VDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLSV----------------DCLELRAWLFIAADDYE 402 (591)
Q Consensus 339 ~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~~----------------~~~~~r~~~~~~~g~~~ 402 (591)
..|+++++++|+.+.+|.++|.++..+|++++|+..|++||+++|+. .++.++|.++..+|+++
T Consensus 134 ~~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~ 213 (336)
T 1p5q_A 134 ESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFS 213 (336)
T ss_dssp CGGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred chhcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 78889999999999999999999999999999999999999999964 77888999999999999
Q ss_pred HHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhh
Q 007721 403 SALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFR 482 (591)
Q Consensus 403 ~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~ 482 (591)
+|+..|++|++++|++ +.+|++
T Consensus 214 ~A~~~~~~al~~~p~~----------------------------------------------------------~~a~~~ 235 (336)
T 1p5q_A 214 AAIESCNKALELDSNN----------------------------------------------------------EKGLSR 235 (336)
T ss_dssp HHHHHHHHHHHHCTTC----------------------------------------------------------HHHHHH
T ss_pred HHHHHHHHHHHhCCCc----------------------------------------------------------HHHHHH
Confidence 9999988888888865 457889
Q ss_pred hHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHH-HHHHHHhhcc
Q 007721 483 QSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEA-LSRAEKSISI 540 (591)
Q Consensus 483 ~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeA-l~~~e~ai~l 540 (591)
+|.++..+|++++|+..|++|++++|++.+++.++|.++..+|++++| -..|++.+..
T Consensus 236 lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 236 RGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 4567776643
No 114
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.71 E-value=3e-17 Score=170.60 Aligned_cols=191 Identities=12% Similarity=0.035 Sum_probs=164.2
Q ss_pred HHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcC-CHHHHHHHHHHHHhcCCcchhh
Q 007721 344 ASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAAD-DYESALRDTLALLALESNYMMF 421 (591)
Q Consensus 344 Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g-~~~~A~~d~~~al~l~P~~~~~ 421 (591)
.|.+.|++..++.++..++...+..++|+..++++|.++|+ ..+|+.|+.++..+| ++++++..++++++.+|++..
T Consensus 46 ~i~y~~~y~~~~~~~r~~~~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~- 124 (349)
T 3q7a_A 46 PIMYSEEYKDAMDYFRAIAAKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQ- 124 (349)
T ss_dssp CBCCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHH-
T ss_pred eeeeCHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHH-
Confidence 45677788889999999999999999999999999999996 788999999999999 599999999999999999843
Q ss_pred hhhchHhHHHHHHHhhh-c-ccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHH-----
Q 007721 422 HGRVSGDHLVKLLNHHV-R-SWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQK----- 494 (591)
Q Consensus 422 ~~~~~~~~~~~~l~~~~-~-~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~----- 494 (591)
+.+.++.+.... . .++ +++..++++|+.+|++..+|+.|+.++.++|+++
T Consensus 125 -----aW~hR~wlL~~l~~~~~~------------------~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~ 181 (349)
T 3q7a_A 125 -----VWHHRLLLLDRISPQDPV------------------SEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEA 181 (349)
T ss_dssp -----HHHHHHHHHHHHCCSCCH------------------HHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred -----HHHHHHHHHHHhcCCChH------------------HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchh
Confidence 333333333222 2 222 2589999999999999999999999999999998
Q ss_pred ---HHHHHHHHHHhcCCchHHHHHhHHHHHHHcCC-------HHHHHHHHHHhhcccccHH-HHHHHHHHhhhcC
Q 007721 495 ---AAMRCLRLARNHSSSEHERLVYEGWILYDTGH-------REEALSRAEKSISIERTFE-AFFLKAYILADTN 558 (591)
Q Consensus 495 ---eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~-------~eeAl~~~e~ai~l~~~~~-~~~~~~~~~~~~~ 558 (591)
++++.++++++.+|.|..|..++|+++..+|+ ++++++.++++|.++|+++ +++.+...+...+
T Consensus 182 ~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~P~n~SaW~Ylr~Ll~~~~ 256 (349)
T 3q7a_A 182 QWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLIPHNVSAWNYLRGFLKHFS 256 (349)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999998 7999999999999999999 7766555554433
No 115
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.71 E-value=1.6e-16 Score=166.89 Aligned_cols=240 Identities=12% Similarity=-0.022 Sum_probs=144.5
Q ss_pred HHHHHHhhhHHhhhccHHHHHHHHHHHhhcc--------ccchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHH
Q 007721 256 MLALHQLGCVMFEREEYKDACYYFEAAADAG--------HIYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQE 327 (591)
Q Consensus 256 ~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~--------~~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~ 327 (591)
...++.+|..+...|++++|+..|++|+.+. ...++..+|.++..+|++..|+..+.+++...+..+.
T Consensus 101 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~---- 176 (378)
T 3q15_A 101 YYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPL---- 176 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTT----
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCC----
Confidence 3456789999999999999999999999872 1246778899999999999898888888776432110
Q ss_pred HHhcCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCC---C----hHHHHHHHHHHHHcCC
Q 007721 328 RSLYNLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKL---S----VDCLELRAWLFIAADD 400 (591)
Q Consensus 328 r~~y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p---~----~~~~~~r~~~~~~~g~ 400 (591)
..+..+.++.++|.++..+|++++|+..|++|+++.+ + ...+.++|.++..+|+
T Consensus 177 -------------------~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~ 237 (378)
T 3q15_A 177 -------------------YSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGD 237 (378)
T ss_dssp -------------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred -------------------chhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCC
Confidence 0011223444444455555555555555555444421 1 1223344444444555
Q ss_pred HHHHHHHHHHHHh-----cCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCC-
Q 007721 401 YESALRDTLALLA-----LESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDP- 474 (591)
Q Consensus 401 ~~~A~~d~~~al~-----l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P- 474 (591)
+++|+..|+++++ .+|.. ..+...++.+....+++++| +..+++++++.+
T Consensus 238 ~~~A~~~~~~al~~~~~~~~~~~------~~~~~~la~~~~~~g~~~~A------------------~~~~~~al~~~~~ 293 (378)
T 3q15_A 238 DQMAVEHFQKAAKVSREKVPDLL------PKVLFGLSWTLCKAGQTQKA------------------FQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGH------HHHHHHHHHHHHHTTCHHHH------------------HHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHHHhhCChhH------HHHHHHHHHHHHHCCCHHHH------------------HHHHHHHHHHHHH
Confidence 5555555555544 22221 12222222222222222222 444444444422
Q ss_pred ----CCchhHhhhHHHHHHhCC---HHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhccccc
Q 007721 475 ----GKSFLRFRQSLLLLRLNC---QKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERT 543 (591)
Q Consensus 475 ----~~~~~~~~~g~~l~~l~~---~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~ 543 (591)
.....+..++.++...|. .++|+..+++ ....|+..+.+..+|.+++.+|++++|+..|++|+.+..+
T Consensus 294 ~~~~~~~~~~~~l~~ly~~~~~~~~~~~al~~~~~-~~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~~~~ 368 (378)
T 3q15_A 294 RSHKFYKELFLFLQAVYKETVDERKIHDLLSYFEK-KNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQED 368 (378)
T ss_dssp TCCSCHHHHHHHHHHHHSSSCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh-CCChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 222223444555555666 7788888877 4556677888999999999999999999999999987654
No 116
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.70 E-value=1.1e-16 Score=158.12 Aligned_cols=183 Identities=14% Similarity=0.063 Sum_probs=151.4
Q ss_pred HHHHHHHHHHHH-------cC-CCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcC--------CC-hHHHHHHHHHHHH
Q 007721 335 REKIVDLNYASE-------LD-PTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFK--------LS-VDCLELRAWLFIA 397 (591)
Q Consensus 335 ~eA~~dl~~Ai~-------Ld-P~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~--------p~-~~~~~~r~~~~~~ 397 (591)
++|+..|++|++ .+ |..+.+|.++|.++..+|++++|+..|++++++. |. ...+..+|.++..
T Consensus 18 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~ 97 (283)
T 3edt_B 18 GSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGK 97 (283)
T ss_dssp SSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHH
Confidence 444444555444 34 7789999999999999999999999999999983 32 4567789999999
Q ss_pred cCCHHHHHHHHHHHHhcC--------CcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHH
Q 007721 398 ADDYESALRDTLALLALE--------SNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQM 469 (591)
Q Consensus 398 ~g~~~~A~~d~~~al~l~--------P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~a 469 (591)
+|++++|+..|++++++. |.. ..+...++.+....+++++| +..++++
T Consensus 98 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~------~~~~~~la~~~~~~g~~~~A------------------~~~~~~a 153 (283)
T 3edt_B 98 RGKYKEAEPLCKRALEIREKVLGKFHPDV------AKQLNNLALLCQNQGKAEEV------------------EYYYRRA 153 (283)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHCTTCHHH------HHHHHHHHHHHHTTTCHHHH------------------HHHHHHH
T ss_pred hccHHHHHHHHHHHHHHHHHHcCCCChHH------HHHHHHHHHHHHHcCCHHHH------------------HHHHHHH
Confidence 999999999999999983 433 33444444444444444444 8899999
Q ss_pred HHc--------CCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhc-----------------------------------
Q 007721 470 LIN--------DPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNH----------------------------------- 506 (591)
Q Consensus 470 l~~--------~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l----------------------------------- 506 (591)
+.+ +|..+.+++++|.++..+|++++|+..+++++++
T Consensus 154 l~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T 3edt_B 154 LEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAP 233 (283)
T ss_dssp HHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC---
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHH
Confidence 999 8888999999999999999999999999999986
Q ss_pred --------------CCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhccc
Q 007721 507 --------------SSSEHERLVYEGWILYDTGHREEALSRAEKSISIE 541 (591)
Q Consensus 507 --------------~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~ 541 (591)
.|+.+.++.++|.++..+|++++|+..|++|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 282 (283)
T 3edt_B 234 YGEYGSWYKACKVDSPTVNTTLRSLGALYRRQGKLEAAHTLEDCASRNR 282 (283)
T ss_dssp ---------CCCCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Confidence 37788899999999999999999999999999874
No 117
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.70 E-value=4.2e-17 Score=167.04 Aligned_cols=207 Identities=12% Similarity=0.012 Sum_probs=161.5
Q ss_pred hhccHHHHHHHHHHHhhccccchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcCCcHHHHHHHHHHHHc
Q 007721 268 EREEYKDACYYFEAAADAGHIYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLYNLGREKIVDLNYASEL 347 (591)
Q Consensus 268 ~~g~~~eA~~~f~~Al~~~~~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~~~~eA~~dl~~Ai~L 347 (591)
..|++++|.+.+++|.+.... .+.. ..|+++.|...|.++ |.+|...+.+ ++|+..|.+|+++
T Consensus 3 ~~~~~~eA~~~~~~a~k~~~~-~~~~------~~~~~~~A~~~~~~a-------~~~~~~~g~~---~~A~~~~~~al~~ 65 (307)
T 2ifu_A 3 AAQKISEAHEHIAKAEKYLKT-SFMK------WKPDYDSAASEYAKA-------AVAFKNAKQL---EQAKDAYLQEAEA 65 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHHCC-CSSS------CSCCHHHHHHHHHHH-------HHHHHHTTCH---HHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHccc-cccC------CCCCHHHHHHHHHHH-------HHHHHHcCCH---HHHHHHHHHHHHH
Confidence 467888898888888776332 1110 147788888888776 4456666555 8888888888888
Q ss_pred CCCC------hHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-------hHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 007721 348 DPTL------SFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-------VDCLELRAWLFIAADDYESALRDTLALLAL 414 (591)
Q Consensus 348 dP~~------~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-------~~~~~~r~~~~~~~g~~~~A~~d~~~al~l 414 (591)
.|.. +.+|.++|.++..+|++++|+..|++|+++.+. ...+.+.|.++.. |++++|+..|++|+++
T Consensus 66 ~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~ 144 (307)
T 2ifu_A 66 HANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAV 144 (307)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHH
Confidence 7654 568899999999999999999999999998432 2446678888888 9999999999999998
Q ss_pred CCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHH
Q 007721 415 ESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQK 494 (591)
Q Consensus 415 ~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~ 494 (591)
.|..- +. +..+.+++++|.++..+|+++
T Consensus 145 ~~~~~---------------------------------------~~-------------~~~~~~~~~lg~~~~~~g~~~ 172 (307)
T 2ifu_A 145 FENEE---------------------------------------RL-------------RQAAELIGKASRLLVRQQKFD 172 (307)
T ss_dssp HHHTT---------------------------------------CH-------------HHHHHHHHHHHHHHHHTTCHH
T ss_pred HHhCC---------------------------------------Ch-------------hHHHHHHHHHHHHHHHcCCHH
Confidence 87530 00 001356788999999999999
Q ss_pred HHHHHHHHHHhcCCch------HHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH
Q 007721 495 AAMRCLRLARNHSSSE------HERLVYEGWILYDTGHREEALSRAEKSISIERTFE 545 (591)
Q Consensus 495 eA~~~~~~Al~l~p~~------~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~ 545 (591)
+|+..|++|+++.|++ +.++.++|.+++.+|++++|+..|++++ ++|+|.
T Consensus 173 ~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 173 EAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTST
T ss_pred HHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCC
Confidence 9999999999987765 3578889999999999999999999999 999764
No 118
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.69 E-value=6.4e-17 Score=148.85 Aligned_cols=114 Identities=19% Similarity=0.187 Sum_probs=107.1
Q ss_pred HHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcc
Q 007721 340 DLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNY 418 (591)
Q Consensus 340 dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~ 418 (591)
.|+++++++|+++.+|+++|.++.++|++++|+..|+++++++|+ +..|.++|.++..+|++++|+..|+++++++|++
T Consensus 24 ~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~ 103 (151)
T 3gyz_A 24 TLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKND 103 (151)
T ss_dssp CTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSC
T ss_pred CHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCC
Confidence 468899999999999999999999999999999999999999995 8889999999999999999999988888888865
Q ss_pred hhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHH
Q 007721 419 MMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMR 498 (591)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~ 498 (591)
+.+|+++|.++..+|++++|+.
T Consensus 104 ----------------------------------------------------------~~~~~~lg~~~~~lg~~~eA~~ 125 (151)
T 3gyz_A 104 ----------------------------------------------------------YTPVFHTGQCQLRLKAPLKAKE 125 (151)
T ss_dssp ----------------------------------------------------------CHHHHHHHHHHHHTTCHHHHHH
T ss_pred ----------------------------------------------------------cHHHHHHHHHHHHcCCHHHHHH
Confidence 5789999999999999999999
Q ss_pred HHHHHHhcCCchH
Q 007721 499 CLRLARNHSSSEH 511 (591)
Q Consensus 499 ~~~~Al~l~p~~~ 511 (591)
.|++|+++.|+..
T Consensus 126 ~~~~al~l~~~~~ 138 (151)
T 3gyz_A 126 CFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHHHCCCHH
T ss_pred HHHHHHHhCCCHH
Confidence 9999999999986
No 119
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.68 E-value=4.8e-16 Score=156.13 Aligned_cols=253 Identities=13% Similarity=0.008 Sum_probs=172.4
Q ss_pred HHHHHHHhhhhccccchhHHHHHHHHhhcch-----hhhHHHHHHHHhhhHHhhhccHHHHHHHHHHHhhcc--------
Q 007721 220 LYYFLSQVAMEKDRVSNTTVMLLERLGECST-----ERWQRMLALHQLGCVMFEREEYKDACYYFEAAADAG-------- 286 (591)
Q Consensus 220 ~~a~Ls~v~~d~~~r~~~~v~lLe~~~~~~~-----~~~~~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~-------- 286 (591)
.+..++.+...... .+.+..+++++++... .......++..+|.++...|++++|+..|++++.+.
T Consensus 29 ~~~~l~~~~~~~g~-~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 107 (311)
T 3nf1_A 29 TLHNLVIQYASQGR-YEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDH 107 (311)
T ss_dssp HHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCC
Confidence 34556666655444 6778888888765422 233346778999999999999999999999998862
Q ss_pred c--cchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcCCcHHHHHHHHHHH-HcCCCChHHHHhHHHHHH
Q 007721 287 H--IYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLYNLGREKIVDLNYAS-ELDPTLSFPYKYRAVAKM 363 (591)
Q Consensus 287 ~--~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~~~~eA~~dl~~Ai-~LdP~~~~ay~~rg~~l~ 363 (591)
+ ..++..+|.++...|++++|...+.+++.... +.. .-+|....++.++|.++.
T Consensus 108 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~-----------------------~~~~~~~~~~~~~~~~la~~~~ 164 (311)
T 3nf1_A 108 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIRE-----------------------KVLGKDHPDVAKQLNNLALLCQ 164 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH-----------------------HHHCTTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH-----------------------HhcCCCChHHHHHHHHHHHHHH
Confidence 1 23566677777888877777666666554421 000 113556788999999999
Q ss_pred HhCCHHHHHHHHHHHHhc--------CCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchh---hhhhchHhHHH
Q 007721 364 EEGQIRAAISEIDRIIVF--------KLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMM---FHGRVSGDHLV 431 (591)
Q Consensus 364 ~l~~~~eAl~~~~~al~l--------~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~---~~~~~~~~~~~ 431 (591)
.+|++++|+..|++++++ .|. ...+..+|.++..+|++++|+..|++++++.|+... -..........
T Consensus 165 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 244 (311)
T 3nf1_A 165 NQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHA 244 (311)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHH
Confidence 999999999999999998 554 566778999999999999999999999987664210 00001112222
Q ss_pred HHHHhhhcccCchhhhhhhhhccccccccc-hHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCc
Q 007721 432 KLLNHHVRSWSPADCWIKLYDRWSSVDDIG-SLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSS 509 (591)
Q Consensus 432 ~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~-al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~ 509 (591)
..+.........+ ..+. +...+.+++..+|..+.+++++|.++.++|++++|+..+++|+++.|+
T Consensus 245 ~~~~~~~~~~~~~-------------~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 245 EEREECKGKQKDG-------------TSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp HHHHHC--------------------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHhcCchhhH-------------HHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc
Confidence 2222222222222 3333 577899999999999999999999999999999999999999999886
No 120
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.67 E-value=2.6e-15 Score=157.63 Aligned_cols=205 Identities=10% Similarity=-0.029 Sum_probs=162.1
Q ss_pred HHHHHHHHHHHHc------CCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC--------hHHHHHHHHHHHHcCC
Q 007721 335 REKIVDLNYASEL------DPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS--------VDCLELRAWLFIAADD 400 (591)
Q Consensus 335 ~eA~~dl~~Ai~L------dP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~--------~~~~~~r~~~~~~~g~ 400 (591)
++|+..|++|+++ +|..+.+|.++|.++..+|++++|+..+++|+++.+. ..++.+.|.++..+|+
T Consensus 120 ~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~ 199 (383)
T 3ulq_A 120 LSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQ 199 (383)
T ss_dssp HHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcC
Confidence 4444445555544 2335678999999999999999999999999998542 2457789999999999
Q ss_pred HHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHH-----cC-C
Q 007721 401 YESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLI-----ND-P 474 (591)
Q Consensus 401 ~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~-----~~-P 474 (591)
+++|+..|++|+++.|+...-.+...+...++.+....+++++| +..++++++ .+ |
T Consensus 200 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A------------------~~~~~~al~~~~~~~~~~ 261 (383)
T 3ulq_A 200 YEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDA------------------IPYFKRAIAVFEESNILP 261 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH------------------HHHHHHHHHHHHHTTCGG
T ss_pred HHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHH------------------HHHHHHHHHHHHhhccch
Confidence 99999999999999886532233334555555555555555555 889999999 67 9
Q ss_pred CCchhHhhhHHHHHHhCCHHHHHHHHHHHHhc-----CCchHHHHHhHHHHHHHcCC---HHHHHHHHHHhhcccccHH-
Q 007721 475 GKSFLRFRQSLLLLRLNCQKAAMRCLRLARNH-----SSSEHERLVYEGWILYDTGH---REEALSRAEKSISIERTFE- 545 (591)
Q Consensus 475 ~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l-----~p~~~~a~~~~G~~l~~~g~---~eeAl~~~e~ai~l~~~~~- 545 (591)
..+.+++++|.++.++|++++|+..+++|+++ +|.....+..+|.++...|+ +++|+..++++ ...|...
T Consensus 262 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~-~~~~~~~~ 340 (383)
T 3ulq_A 262 SLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAIQGFFDFLESK-MLYADLED 340 (383)
T ss_dssp GHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHT-TCHHHHHH
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHC-cCHHHHHH
Confidence 99999999999999999999999999999999 55555567889999999999 99999999998 3344433
Q ss_pred HHHHHHHHhhhcC
Q 007721 546 AFFLKAYILADTN 558 (591)
Q Consensus 546 ~~~~~~~~~~~~~ 558 (591)
++...|.++...+
T Consensus 341 ~~~~la~~y~~~g 353 (383)
T 3ulq_A 341 FAIDVAKYYHERK 353 (383)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCC
Confidence 7777887777655
No 121
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.67 E-value=7.3e-16 Score=142.12 Aligned_cols=155 Identities=8% Similarity=0.073 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLA 413 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~ 413 (591)
++|+..|+++++.+|+++.++..+|.++...|++++|+..++++++.+|+ +..+..+|.++...|++++|+..|+++++
T Consensus 25 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 104 (186)
T 3as5_A 25 SQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAE 104 (186)
T ss_dssp HHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 77788888888888989999999999999999999999999999999885 67778888999999999999999999999
Q ss_pred cCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCH
Q 007721 414 LESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQ 493 (591)
Q Consensus 414 l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~ 493 (591)
++|++. .+....+.+....+++++| +..++++++.+|.++.+++.+|.++..+|++
T Consensus 105 ~~~~~~------~~~~~~a~~~~~~~~~~~A------------------~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~ 160 (186)
T 3as5_A 105 ANPINF------NVRFRLGVALDNLGRFDEA------------------IDSFKIALGLRPNEGKVHRAIAFSYEQMGRH 160 (186)
T ss_dssp HCTTCH------HHHHHHHHHHHHTTCHHHH------------------HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred cCcHhH------HHHHHHHHHHHHcCcHHHH------------------HHHHHHHHhcCccchHHHHHHHHHHHHcCCH
Confidence 998863 2333333333344444444 7889999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCchHHH
Q 007721 494 KAAMRCLRLARNHSSSEHER 513 (591)
Q Consensus 494 ~eA~~~~~~Al~l~p~~~~a 513 (591)
++|+..++++++++|++...
T Consensus 161 ~~A~~~~~~~~~~~~~~~~~ 180 (186)
T 3as5_A 161 EEALPHFKKANELDEGASVE 180 (186)
T ss_dssp HHHHHHHHHHHHHHHCCCGG
T ss_pred HHHHHHHHHHHHcCCCchhh
Confidence 99999999999999987654
No 122
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.66 E-value=1.5e-14 Score=150.89 Aligned_cols=249 Identities=11% Similarity=-0.025 Sum_probs=188.0
Q ss_pred hhhhHHHHHHhCChHHHHHHHHHHHHhcCCCH-----HHHHHHHh----cCCcHHHHHHHHHHHHcCCCChHH------H
Q 007721 291 LAGLARAKYKVGQQYSAYKLINSIISEHKPTG-----WMYQERSL----YNLGREKIVDLNYASELDPTLSFP------Y 355 (591)
Q Consensus 291 ~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g-----~a~~~r~~----y~~~~eA~~dl~~Ai~LdP~~~~a------y 355 (591)
...+|.++...|++++|...+.+++...|... .++...+. .+..++|...+++++++.|..... +
T Consensus 17 ~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 96 (373)
T 1hz4_A 17 NALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSL 96 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 34567788899999999999999998876431 13333321 133489999999999998876443 7
Q ss_pred HhHHHHHHHhCCHHHHHHHHHHHHhcCC--------C-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhch
Q 007721 356 KYRAVAKMEEGQIRAAISEIDRIIVFKL--------S-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVS 426 (591)
Q Consensus 356 ~~rg~~l~~l~~~~eAl~~~~~al~l~p--------~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~ 426 (591)
.++|.++..+|++++|+..+++++++.+ . ...+.++|.++...|++++|+..+++++++.|...... ...
T Consensus 97 ~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-~~~ 175 (373)
T 1hz4_A 97 IQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQ-QLQ 175 (373)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGG-GHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHH-HHH
Confidence 8899999999999999999999999852 2 23456789999999999999999999999998752211 223
Q ss_pred HhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCC--CchhHh-----hhHHHHHHhCCHHHHHHH
Q 007721 427 GDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPG--KSFLRF-----RQSLLLLRLNCQKAAMRC 499 (591)
Q Consensus 427 ~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~--~~~~~~-----~~g~~l~~l~~~~eA~~~ 499 (591)
+...++.+.....++++| +..+++++++.+. .+..+. .++.++...|++++|.+.
T Consensus 176 ~~~~la~~~~~~g~~~~A------------------~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~ 237 (373)
T 1hz4_A 176 CLAMLIQCSLARGDLDNA------------------RSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANW 237 (373)
T ss_dssp HHHHHHHHHHHHTCHHHH------------------HHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHH------------------HHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 444555555555555555 7788888877433 322222 345568899999999999
Q ss_pred HHHHHhcCCch----HHHHHhHHHHHHHcCCHHHHHHHHHHhhccccc------H-HHHHHHHHHhhhcC
Q 007721 500 LRLARNHSSSE----HERLVYEGWILYDTGHREEALSRAEKSISIERT------F-EAFFLKAYILADTN 558 (591)
Q Consensus 500 ~~~Al~l~p~~----~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~------~-~~~~~~~~~~~~~~ 558 (591)
++++++..|.. ...+..+|.++..+|++++|+..+++++.+.+. . +++.+.|.++....
T Consensus 238 ~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g 307 (373)
T 1hz4_A 238 LRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAG 307 (373)
T ss_dssp HHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHhCCCCCCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHhC
Confidence 99999988753 336789999999999999999999999998553 1 37777787776554
No 123
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.66 E-value=6.7e-16 Score=171.88 Aligned_cols=174 Identities=11% Similarity=0.090 Sum_probs=150.2
Q ss_pred HHHHhCC-HHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCC----------HHHHHHHHHHHHhcCCcchhhhhhchHh
Q 007721 361 AKMEEGQ-IRAAISEIDRIIVFKLS-VDCLELRAWLFIAADD----------YESALRDTLALLALESNYMMFHGRVSGD 428 (591)
Q Consensus 361 ~l~~l~~-~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~----------~~~A~~d~~~al~l~P~~~~~~~~~~~~ 428 (591)
.+++.|. .++|++.++++|+++|+ +.+|+.|+.++..+|+ +++|+..++++++.+|++.. +.
T Consensus 37 ~~~~~~~~~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~------aW 110 (567)
T 1dce_A 37 QKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYG------TW 110 (567)
T ss_dssp HHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHH------HH
T ss_pred HHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHH------HH
Confidence 4445554 56889999999999996 8999999999999999 99999999999999999843 33
Q ss_pred HHHHHHHhhhc--ccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhC-CHHHHHHHHHHHHh
Q 007721 429 HLVKLLNHHVR--SWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLN-CQKAAMRCLRLARN 505 (591)
Q Consensus 429 ~~~~~l~~~~~--~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~-~~~eA~~~~~~Al~ 505 (591)
+.++-+..... +|++ ++.+++++|++||.+..+|+.|+.++.++| .+++|++.+.++++
T Consensus 111 ~hR~w~l~~l~~~~~~~------------------el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~ 172 (567)
T 1dce_A 111 HHRCWLLSRLPEPNWAR------------------ELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLIT 172 (567)
T ss_dssp HHHHHHHHTCSSCCHHH------------------HHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTT
T ss_pred HHHHHHHHHcccccHHH------------------HHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 33333333333 2222 599999999999999999999999999999 99999999999999
Q ss_pred cCCchHHHHHhHHHHHHHc--------------CCHHHHHHHHHHhhcccccHH-HHHHHHHHhhhcC
Q 007721 506 HSSSEHERLVYEGWILYDT--------------GHREEALSRAEKSISIERTFE-AFFLKAYILADTN 558 (591)
Q Consensus 506 l~p~~~~a~~~~G~~l~~~--------------g~~eeAl~~~e~ai~l~~~~~-~~~~~~~~~~~~~ 558 (591)
.+|++..|++++|.++..+ +.+++|++.+++||.++|+++ +++.++..+....
T Consensus 173 ~~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll~~~~ 240 (567)
T 1dce_A 173 RNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAE 240 (567)
T ss_dssp TTCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHSCCC
T ss_pred HCCCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHhcCC
Confidence 9999999999999999986 678999999999999999999 9999999997644
No 124
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.66 E-value=4.8e-18 Score=176.87 Aligned_cols=178 Identities=14% Similarity=0.066 Sum_probs=153.5
Q ss_pred HHHHHHHHH----HHHcCCCChHHHHhHHHHHH------------HhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHH
Q 007721 335 REKIVDLNY----ASELDPTLSFPYKYRAVAKM------------EEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIA 397 (591)
Q Consensus 335 ~eA~~dl~~----Ai~LdP~~~~ay~~rg~~l~------------~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~ 397 (591)
++|+..+++ ++.++|++ +|.++|.... .++++++|+..|+++++.+|+ ...+..+|.++..
T Consensus 82 e~al~~~~~Ge~~~l~i~p~~--ayg~~g~~~~~i~~~~~l~f~~~L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~ 159 (336)
T 1p5q_A 82 ERAIQRMEKGEHSIVYLKPSY--AFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFK 159 (336)
T ss_dssp HHHHTTCCTTCEEEEEECTTT--TTTTTCBGGGTBCSSCCEEEEEEEEEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCeEEEEECCcc--ccCcCCCCccCCCCCCeEEEEEEEeecccccchhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 566666666 78888886 6777776653 688899999999999999996 7888999999999
Q ss_pred cCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCc
Q 007721 398 ADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKS 477 (591)
Q Consensus 398 ~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~ 477 (591)
+|++++|+..|++|++++|++..+ + .++..+++|..+
T Consensus 160 ~g~~~~A~~~y~~Al~~~p~~~~~------------------------------------~-------~~~~~~~~~~~~ 196 (336)
T 1p5q_A 160 EGKYKQALLQYKKIVSWLEYESSF------------------------------------S-------NEEAQKAQALRL 196 (336)
T ss_dssp HTCHHHHHHHHHHHHHHTTTCCCC------------------------------------C-------SHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhhccccC------------------------------------C-------hHHHHHHHHHHH
Confidence 999999999999999999987310 0 133455566677
Q ss_pred hhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH-HHHHHHHHhhh
Q 007721 478 FLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFE-AFFLKAYILAD 556 (591)
Q Consensus 478 ~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~-~~~~~~~~~~~ 556 (591)
.+|+++|.++.++|++++|+..|++|++++|+++.+++++|.+++.+|++++|+..|++|++++|++. ++++.|.++..
T Consensus 197 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~ 276 (336)
T 1p5q_A 197 ASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQR 276 (336)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999987 88888877764
Q ss_pred c
Q 007721 557 T 557 (591)
Q Consensus 557 ~ 557 (591)
.
T Consensus 277 ~ 277 (336)
T 1p5q_A 277 I 277 (336)
T ss_dssp H
T ss_pred H
Confidence 3
No 125
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.66 E-value=2.3e-16 Score=145.32 Aligned_cols=116 Identities=14% Similarity=0.073 Sum_probs=103.0
Q ss_pred hHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-------h------HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcc
Q 007721 352 SFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-------V------DCLELRAWLFIAADDYESALRDTLALLALESNY 418 (591)
Q Consensus 352 ~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-------~------~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~ 418 (591)
+..+.++|+.+..+|+|++|+..|++||+++|+ . .+|.++|.++..+|+|++|+.+|++||++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l---- 86 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY---- 86 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh----
Confidence 567899999999999999999999999999997 1 27899999999999999999999999875
Q ss_pred hhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhH----hhhHHHHHHhCCHH
Q 007721 419 MMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLR----FRQSLLLLRLNCQK 494 (591)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~----~~~g~~l~~l~~~~ 494 (591)
|+++++++|+++.+| +|+|.+|..+|+++
T Consensus 87 -----------------------------------------------~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~e 119 (159)
T 2hr2_A 87 -----------------------------------------------FNRRGELNQDEGKLWISAVYSRALALDGLGRGA 119 (159)
T ss_dssp -----------------------------------------------HHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred -----------------------------------------------hhccccCCCchHHHHHHHHHhHHHHHHHCCCHH
Confidence 466677788888888 99999999999999
Q ss_pred HHHHHHHHHHhcCCchHHHHHhHH
Q 007721 495 AAMRCLRLARNHSSSEHERLVYEG 518 (591)
Q Consensus 495 eA~~~~~~Al~l~p~~~~a~~~~G 518 (591)
||+.+|++|++++|+++.+.--+.
T Consensus 120 EAl~~y~kAlel~p~d~~~~~~~~ 143 (159)
T 2hr2_A 120 EAMPEFKKVVEMIEERKGETPGKE 143 (159)
T ss_dssp HHHHHHHHHHHHHHHCCSCCTTHH
T ss_pred HHHHHHHHHHhcCCCcHHHHHHHH
Confidence 999999999999999876654433
No 126
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.65 E-value=1.3e-16 Score=147.06 Aligned_cols=114 Identities=14% Similarity=0.046 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHH
Q 007721 386 DCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAV 465 (591)
Q Consensus 386 ~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~ 465 (591)
..+.++|..+..+|+|++|+..|++|++++|+++.. ++
T Consensus 12 ~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~---------------------~a--------------------- 49 (159)
T 2hr2_A 12 YLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPE---------------------EA--------------------- 49 (159)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTT---------------------SC---------------------
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcch---------------------hh---------------------
Confidence 446779999999999999999999999999997321 01
Q ss_pred HHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhc-------CCchHHHH----HhHHHHHHHcCCHHHHHHHH
Q 007721 466 INQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNH-------SSSEHERL----VYEGWILYDTGHREEALSRA 534 (591)
Q Consensus 466 ~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l-------~p~~~~a~----~~~G~~l~~~g~~eeAl~~~ 534 (591)
+...|.++.+|.|+|.++.++|++++|+.+|++||++ +|+++.++ +++|.+|..+|+++||+..|
T Consensus 50 ----~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y 125 (159)
T 2hr2_A 50 ----FDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEF 125 (159)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred ----hhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHH
Confidence 1123445569999999999999999999999999999 99999999 99999999999999999999
Q ss_pred HHhhcccccHH
Q 007721 535 EKSISIERTFE 545 (591)
Q Consensus 535 e~ai~l~~~~~ 545 (591)
++|++++|+..
T Consensus 126 ~kAlel~p~d~ 136 (159)
T 2hr2_A 126 KKVVEMIEERK 136 (159)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHhcCCCcH
Confidence 99999999743
No 127
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.65 E-value=2.6e-15 Score=143.48 Aligned_cols=143 Identities=10% Similarity=0.060 Sum_probs=122.8
Q ss_pred HHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHH
Q 007721 353 FPYKYRAVAKMEEGQIRAAISEIDRIIVFKLSVDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVK 432 (591)
Q Consensus 353 ~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~ 432 (591)
..++++|.++...|++++|+..|++++ +|++..+.++|.++..+|++++|+..|+++++++|++
T Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-------------- 70 (213)
T 1hh8_A 7 ISLWNEGVLAADKKDWKGALDAFSAVQ--DPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHL-------------- 70 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTSS--SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--------------
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHc--CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc--------------
Confidence 457889999999999999999999996 7788888999999999999999999888888887764
Q ss_pred HHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchH-
Q 007721 433 LLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEH- 511 (591)
Q Consensus 433 ~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~- 511 (591)
+.+++++|.++..+|++++|+..+++++++.|++.
T Consensus 71 --------------------------------------------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~ 106 (213)
T 1hh8_A 71 --------------------------------------------AVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQL 106 (213)
T ss_dssp --------------------------------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSE
T ss_pred --------------------------------------------hHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccH
Confidence 35678889999999999999999999999777655
Q ss_pred ---------------HHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH-HHHHHHHHhh
Q 007721 512 ---------------ERLVYEGWILYDTGHREEALSRAEKSISIERTFE-AFFLKAYILA 555 (591)
Q Consensus 512 ---------------~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~-~~~~~~~~~~ 555 (591)
.+++++|.+++.+|++++|+..|++++++.|+.. +...+++..-
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~ 166 (213)
T 1hh8_A 107 IDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECV 166 (213)
T ss_dssp EECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGGGHHHHHHHHH
T ss_pred HHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccccchHHHHHHHH
Confidence 9999999999999999999999999999999775 5555555443
No 128
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.64 E-value=1.1e-15 Score=150.87 Aligned_cols=237 Identities=14% Similarity=0.026 Sum_probs=162.1
Q ss_pred chhHHHHHHHHhhcch-----hhhHHHHHHHHhhhHHhhhccHHHHHHHHHHHhhcc--------c--cchhhhhHHHHH
Q 007721 235 SNTTVMLLERLGECST-----ERWQRMLALHQLGCVMFEREEYKDACYYFEAAADAG--------H--IYSLAGLARAKY 299 (591)
Q Consensus 235 ~~~~v~lLe~~~~~~~-----~~~~~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~--------~--~~a~~~la~~~~ 299 (591)
.+.+..+++++++... +......++..+|.++...|++++|+..|++++++. + ..++..+|.++.
T Consensus 17 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~ 96 (283)
T 3edt_B 17 RGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYG 96 (283)
T ss_dssp SSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH
Confidence 5567888888665321 223345678888888888888888888888888762 1 224556666777
Q ss_pred HhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcCCcHHHHHHHHHHHH-cCCCChHHHHhHHHHHHHhCCHHHHHHHHHHH
Q 007721 300 KVGQQYSAYKLINSIISEHKPTGWMYQERSLYNLGREKIVDLNYASE-LDPTLSFPYKYRAVAKMEEGQIRAAISEIDRI 378 (591)
Q Consensus 300 ~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~~~~eA~~dl~~Ai~-LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~a 378 (591)
.+|++++|...+.+++.... +... -+|....+|.++|.++..+|++++|+..|+++
T Consensus 97 ~~g~~~~A~~~~~~al~~~~-----------------------~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 153 (283)
T 3edt_B 97 KRGKYKEAEPLCKRALEIRE-----------------------KVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRA 153 (283)
T ss_dssp TTTCHHHHHHHHHHHHHHHH-----------------------HHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHHHH-----------------------HHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 77766655555554443321 0000 04677889999999999999999999999999
Q ss_pred Hhc--------CCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchh---hhhhchHhHHHHHHHhhhcccCchhh
Q 007721 379 IVF--------KLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMM---FHGRVSGDHLVKLLNHHVRSWSPADC 446 (591)
Q Consensus 379 l~l--------~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~---~~~~~~~~~~~~~l~~~~~~~~~a~~ 446 (591)
+++ .|. ...+.++|.++..+|++++|+..|++++++.|.... ...........+...........+.
T Consensus 154 l~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 232 (283)
T 3edt_B 154 LEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSA- 232 (283)
T ss_dssp HHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC---
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHH-
Confidence 999 554 566788999999999999999999999998654321 1111223333444444444444332
Q ss_pred hhhhhhccccccccc-hHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcC
Q 007721 447 WIKLYDRWSSVDDIG-SLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHS 507 (591)
Q Consensus 447 ~~~l~~~~~~~~~~~-al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~ 507 (591)
.+. +...+.......|..+.++.++|.++..+|++++|+..+++|+++.
T Consensus 233 ------------~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 282 (283)
T 3edt_B 233 ------------PYGEYGSWYKACKVDSPTVNTTLRSLGALYRRQGKLEAAHTLEDCASRNR 282 (283)
T ss_dssp ----------------------CCCCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred ------------HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Confidence 111 2223444444668888899999999999999999999999999864
No 129
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.64 E-value=1.5e-15 Score=138.67 Aligned_cols=120 Identities=13% Similarity=0.027 Sum_probs=95.5
Q ss_pred HHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcc
Q 007721 340 DLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNY 418 (591)
Q Consensus 340 dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~ 418 (591)
.|+++++++|+++.+++++|.++...|++++|+..|+++++++|+ +..++++|.++..+|++++|+..|+++++++|++
T Consensus 9 ~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 88 (148)
T 2vgx_A 9 TIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXE 88 (148)
T ss_dssp SHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred hHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC
Confidence 467888888888888888888888888888888888888888884 7777788888888888888888777777777754
Q ss_pred hhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHH
Q 007721 419 MMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMR 498 (591)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~ 498 (591)
+.+++++|.++..+|++++|+.
T Consensus 89 ----------------------------------------------------------~~~~~~lg~~~~~~g~~~~A~~ 110 (148)
T 2vgx_A 89 ----------------------------------------------------------PRFPFHAAECLLQXGELAEAES 110 (148)
T ss_dssp ----------------------------------------------------------THHHHHHHHHHHHTTCHHHHHH
T ss_pred ----------------------------------------------------------chHHHHHHHHHHHcCCHHHHHH
Confidence 3567778888888888888888
Q ss_pred HHHHHHhcCCchHHHHHhH
Q 007721 499 CLRLARNHSSSEHERLVYE 517 (591)
Q Consensus 499 ~~~~Al~l~p~~~~a~~~~ 517 (591)
.|++|++++|++++....+
T Consensus 111 ~~~~al~~~p~~~~~~~~~ 129 (148)
T 2vgx_A 111 GLFLAQELIANXPEFXELS 129 (148)
T ss_dssp HHHHHHHHHTTCGGGHHHH
T ss_pred HHHHHHHHCcCCCcchHHH
Confidence 8888888888776654433
No 130
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.64 E-value=4e-15 Score=144.97 Aligned_cols=172 Identities=15% Similarity=0.081 Sum_probs=130.9
Q ss_pred HHHHHHHHHHHHcCCCCh---HHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-h---HHHHHHHHHHHH----------
Q 007721 335 REKIVDLNYASELDPTLS---FPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-V---DCLELRAWLFIA---------- 397 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~---~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~---~~~~~r~~~~~~---------- 397 (591)
++|+..|+++++.+|+.. .+++++|.++..+|++++|+..|+++++.+|+ + .+++.+|.++..
T Consensus 21 ~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~ 100 (225)
T 2yhc_A 21 RQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFF 100 (225)
T ss_dssp HHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhh
Confidence 777777888888878764 68999999999999999999999999999995 3 367788887765
Q ss_pred --------cCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccc-hHHHHHH
Q 007721 398 --------ADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIG-SLAVINQ 468 (591)
Q Consensus 398 --------~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~-al~~~~~ 468 (591)
+|++++|+..|+++++..|+...+.. +......+.... +.....++..+...+++. |+..+++
T Consensus 101 ~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~---a~~~l~~~~~~~-----~~~~~~~a~~~~~~~~~~~A~~~~~~ 172 (225)
T 2yhc_A 101 GVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTD---ATKRLVFLKDRL-----AKYEYSVAEYYTERGAWVAVVNRVEG 172 (225)
T ss_dssp -------CCHHHHHHHHHHHHHHTTCTTCTTHHH---HHHHHHHHHHHH-----HHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred ccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHH---HHHHHHHHHHHH-----HHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 68999999999999999999854211 111111111111 111122333333335555 7899999
Q ss_pred HHHcCCCCc---hhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHH
Q 007721 469 MLINDPGKS---FLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERL 514 (591)
Q Consensus 469 al~~~P~~~---~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~ 514 (591)
+++..|+++ ++++++|.++.++|++++|+..++++....|++.+-|
T Consensus 173 ~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~~~~~~~~~ 221 (225)
T 2yhc_A 173 MLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAANSSNTLEHH 221 (225)
T ss_dssp HHHHSTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCCSCCCCCT
T ss_pred HHHHCcCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCCchhhc
Confidence 999999987 7899999999999999999999999999999987644
No 131
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.63 E-value=1.9e-15 Score=152.98 Aligned_cols=218 Identities=10% Similarity=0.015 Sum_probs=164.7
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLA 413 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~ 413 (591)
++|+..|++|++++|+++.+|.++|.++..+|++++|+..+++|++++|+ +..++++|.++..+|++++|+..|+++++
T Consensus 21 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 100 (281)
T 2c2l_A 21 PEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYS 100 (281)
T ss_dssp HHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 78888999999999999999999999999999999999999999999996 78889999999999999999999999999
Q ss_pred cCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCH
Q 007721 414 LESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQ 493 (591)
Q Consensus 414 l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~ 493 (591)
++|++...++......+ . ... + ...........|.++.+...++.++ .|++
T Consensus 101 l~p~~~~~~~~~~~~~~-~--~~~------~------------------~~~~~~~~~~~~~~~~i~~~l~~l~--~~~~ 151 (281)
T 2c2l_A 101 LAKEQRLNFGDDIPSAL-R--IAK------K------------------KRWNSIEERRIHQESELHSYLTRLI--AAER 151 (281)
T ss_dssp HHHHTTCCCCSHHHHHH-H--HHH------H------------------HHHHHHHHTCCCCCCHHHHHHHHHH--HHHH
T ss_pred hCccchhhHHHHHHHHH-H--HHH------H------------------HHHHHHHHHHHhhhHHHHHHHHHHH--HHHH
Confidence 99987543332111110 0 000 0 1122233456777888877777765 7999
Q ss_pred HHHHHHHHHHHhcCCchHHHHHhHHHHHHHc-CCHHHHHHHHHHhhcccccHH--HHHHHHHHhhhcCCCCCc-------
Q 007721 494 KAAMRCLRLARNHSSSEHERLVYEGWILYDT-GHREEALSRAEKSISIERTFE--AFFLKAYILADTNLDPES------- 563 (591)
Q Consensus 494 ~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~-g~~eeAl~~~e~ai~l~~~~~--~~~~~~~~~~~~~~~~~~------- 563 (591)
++|++.+++|++++|++......++-++... +++++|...|+++.+..+..+ .+|.=.+. -+.--||-.
T Consensus 152 ~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~f~~a~~~~~~~~~~~~~~c~i~-~~~~~dPv~~~~gh~f 230 (281)
T 2c2l_A 152 ERELEECQRNHEGHEDDGHIRAQQACIEAKHDKYMADMDELFSQVDEKRKKRDIPDYLCGKIS-FELMREPCITPSGITY 230 (281)
T ss_dssp HHHHTTTSGGGTTTSCHHHHTHHHHHHHHHHHHHHHHHHHHHHHSSCTTSCCCCCSTTBCTTT-CSBCSSEEECSSCCEE
T ss_pred HHHHHHHHhhhccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccCCcCc-CCHhcCCeECCCCCEE
Confidence 9999999999999999998888888877777 889999999999998644433 23322221 112224432
Q ss_pred -hhHHHHHHHHHhc-CCCCCc
Q 007721 564 -STYVIQLLEEALR-CPSDGL 582 (591)
Q Consensus 564 -~~~~~~~~~~~~~-~~~~~~ 582 (591)
.+.+...|++--. ||..+-
T Consensus 231 ~~~~i~~~~~~~~~~cP~~~~ 251 (281)
T 2c2l_A 231 DRKDIEEHLQRVGHFNPVTRS 251 (281)
T ss_dssp ETTHHHHHHHHTCSSCTTTCC
T ss_pred CHHHHHHHHHHCCCCCcCCCC
Confidence 5567777776433 998764
No 132
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.61 E-value=1.7e-15 Score=138.33 Aligned_cols=115 Identities=15% Similarity=-0.010 Sum_probs=103.7
Q ss_pred HHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhh
Q 007721 373 SEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLY 451 (591)
Q Consensus 373 ~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~ 451 (591)
..|+++++++|+ ...++.+|.++...|++++|+..|+++++++|++
T Consensus 8 ~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~--------------------------------- 54 (148)
T 2vgx_A 8 GTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYD--------------------------------- 54 (148)
T ss_dssp CSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------------------------
T ss_pred hhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCccc---------------------------------
Confidence 468889999985 7778889999999999999988888877777764
Q ss_pred hccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHH
Q 007721 452 DRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEAL 531 (591)
Q Consensus 452 ~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl 531 (591)
+.+|+++|.++..+|++++|+..|++|++++|+++++++++|.+++.+|++++|+
T Consensus 55 -------------------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~~A~ 109 (148)
T 2vgx_A 55 -------------------------SRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGELAEAE 109 (148)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHH
T ss_pred -------------------------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHcCCHHHHH
Confidence 5678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccccHH
Q 007721 532 SRAEKSISIERTFE 545 (591)
Q Consensus 532 ~~~e~ai~l~~~~~ 545 (591)
..|++++++.|+..
T Consensus 110 ~~~~~al~~~p~~~ 123 (148)
T 2vgx_A 110 SGLFLAQELIANXP 123 (148)
T ss_dssp HHHHHHHHHHTTCG
T ss_pred HHHHHHHHHCcCCC
Confidence 99999999988743
No 133
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.61 E-value=1.6e-15 Score=136.77 Aligned_cols=126 Identities=12% Similarity=-0.025 Sum_probs=95.2
Q ss_pred HHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Q 007721 339 VDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESN 417 (591)
Q Consensus 339 ~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~ 417 (591)
..|.++++++|+++.+++++|.++...|++++|+..|+++++++|+ +..++.+|.++..+|++++|+..|+++++++|+
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 84 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDIN 84 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 3567788888888888888888888888888888888888888884 677777888888888888888877777777665
Q ss_pred chhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHH
Q 007721 418 YMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAM 497 (591)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~ 497 (591)
+ +.+++++|.++..+|++++|+
T Consensus 85 ~----------------------------------------------------------~~~~~~lg~~~~~~g~~~~A~ 106 (142)
T 2xcb_A 85 E----------------------------------------------------------PRFPFHAAECHLQLGDLDGAE 106 (142)
T ss_dssp C----------------------------------------------------------THHHHHHHHHHHHTTCHHHHH
T ss_pred C----------------------------------------------------------cHHHHHHHHHHHHcCCHHHHH
Confidence 4 355777888888888888888
Q ss_pred HHHHHHHhcCCchHHHHHhHHHHHH
Q 007721 498 RCLRLARNHSSSEHERLVYEGWILY 522 (591)
Q Consensus 498 ~~~~~Al~l~p~~~~a~~~~G~~l~ 522 (591)
..|+++++++|++++....+..+.-
T Consensus 107 ~~~~~al~~~p~~~~~~~~~~~~~~ 131 (142)
T 2xcb_A 107 SGFYSARALAAAQPAHEALAARAGA 131 (142)
T ss_dssp HHHHHHHHHHHTCGGGHHHHHHHHH
T ss_pred HHHHHHHHhCCCCcchHHHHHHHHH
Confidence 8888888888877766555544443
No 134
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.60 E-value=1.1e-14 Score=147.86 Aligned_cols=147 Identities=13% Similarity=-0.008 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCChHHHH-HHHHHHHHcCCHHHHHHHHHHHHh
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLSVDCLE-LRAWLFIAADDYESALRDTLALLA 413 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~~~~~~-~r~~~~~~~g~~~~A~~d~~~al~ 413 (591)
++|+..|+++++++|+++.++.++|.++..+|++++|+..++++++.+|+..... ..+..+...|+.++|+..|+++++
T Consensus 134 ~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~ 213 (287)
T 3qou_A 134 TDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVA 213 (287)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHh
Confidence 5566666667777777777777777777777777777777777777777643333 334456666777777777777777
Q ss_pred cCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCC--chhHhhhHHHHHHhC
Q 007721 414 LESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGK--SFLRFRQSLLLLRLN 491 (591)
Q Consensus 414 l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~--~~~~~~~g~~l~~l~ 491 (591)
++|++ ..+...++.+....+++++| +..++++++.+|++ +.++.++|.++..+|
T Consensus 214 ~~P~~------~~~~~~la~~l~~~g~~~~A------------------~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g 269 (287)
T 3qou_A 214 ENPED------AALATQLALQLHQVGRNEEA------------------LELLFGHLRXDLTAADGQTRXTFQEILAALG 269 (287)
T ss_dssp HCTTC------HHHHHHHHHHHHHTTCHHHH------------------HHHHHHHHHHCTTGGGGHHHHHHHHHHHHHC
T ss_pred cCCcc------HHHHHHHHHHHHHcccHHHH------------------HHHHHHHHhcccccccchHHHHHHHHHHHcC
Confidence 77766 23333333333344444444 66777777777777 788999999999999
Q ss_pred CHHHHHHHHHHHHh
Q 007721 492 CQKAAMRCLRLARN 505 (591)
Q Consensus 492 ~~~eA~~~~~~Al~ 505 (591)
+.++|...|++++.
T Consensus 270 ~~~~a~~~~r~al~ 283 (287)
T 3qou_A 270 TGDALASXYRRQLY 283 (287)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHH
Confidence 99999999999986
No 135
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.60 E-value=6.9e-15 Score=137.50 Aligned_cols=155 Identities=13% Similarity=-0.038 Sum_probs=134.5
Q ss_pred HHHHhhhHHhhhccHHHHHHHHHHHhhccc--cchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhc----
Q 007721 258 ALHQLGCVMFEREEYKDACYYFEAAADAGH--IYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLY---- 331 (591)
Q Consensus 258 a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~--~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y---- 331 (591)
.+..+|..+...|++++|+..|+++++..| ..++.++|.++...|++++|+..+.+++...| .+..+...+..
T Consensus 8 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~ 86 (176)
T 2r5s_A 8 QLLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQ 86 (176)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHh
Confidence 356788899999999999999999998854 56788999999999999999999999999988 65544333211
Q ss_pred -CCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC---hHHHHHHHHHHHHcCCHHHHHHH
Q 007721 332 -NLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS---VDCLELRAWLFIAADDYESALRD 407 (591)
Q Consensus 332 -~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~---~~~~~~r~~~~~~~g~~~~A~~d 407 (591)
....+|+..|+++++++|+++.+++++|.++..+|++++|+..|+++++++|+ +..+.+++.++..+|+.++|+..
T Consensus 87 ~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~ 166 (176)
T 2r5s_A 87 QAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASK 166 (176)
T ss_dssp HHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHH
T ss_pred hcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHH
Confidence 11245799999999999999999999999999999999999999999999996 34788899999999999999999
Q ss_pred HHHHHh
Q 007721 408 TLALLA 413 (591)
Q Consensus 408 ~~~al~ 413 (591)
|++++.
T Consensus 167 y~~al~ 172 (176)
T 2r5s_A 167 YRRQLY 172 (176)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999985
No 136
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.59 E-value=2.2e-14 Score=159.20 Aligned_cols=161 Identities=11% Similarity=-0.002 Sum_probs=121.7
Q ss_pred ccHHHHHHHHHHHhhccc--cchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcCCcHHHHHHHHHHHHc
Q 007721 270 EEYKDACYYFEAAADAGH--IYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLYNLGREKIVDLNYASEL 347 (591)
Q Consensus 270 g~~~eA~~~f~~Al~~~~--~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~~~~eA~~dl~~Ai~L 347 (591)
|++++|+..|+++++..+ ..++..+|.++...|++ ++|+..|++|+++
T Consensus 3 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~------------------------------~~A~~~~~~al~~ 52 (568)
T 2vsy_A 3 ADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDT------------------------------TAGEMAVQRGLAL 52 (568)
T ss_dssp ------------------CCHHHHHHHHHHHHHHTCH------------------------------HHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH------------------------------HHHHHHHHHHHHh
Confidence 456666666666666533 23444455555544444 7788889999999
Q ss_pred CCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhch
Q 007721 348 DPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVS 426 (591)
Q Consensus 348 dP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~ 426 (591)
+|+++.+|.++|.++..+|++++|+..|+++++++|+ +..+.++|.++..+|++++|+..|+++++++|++
T Consensus 53 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~-------- 124 (568)
T 2vsy_A 53 HPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEE-------- 124 (568)
T ss_dssp STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--------
T ss_pred CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--------
Confidence 9999999999999999999999999999999999996 7888999999999999999999998888888865
Q ss_pred HhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHh---CCHHHHHHHHHHH
Q 007721 427 GDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRL---NCQKAAMRCLRLA 503 (591)
Q Consensus 427 ~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l---~~~~eA~~~~~~A 503 (591)
+.++.++|.++..+ |++++|++.++++
T Consensus 125 --------------------------------------------------~~~~~~l~~~~~~~~~~g~~~~A~~~~~~a 154 (568)
T 2vsy_A 125 --------------------------------------------------PYITAQLLNWRRRLCDWRALDVLSAQVRAA 154 (568)
T ss_dssp --------------------------------------------------HHHHHHHHHHHHHTTCCTTHHHHHHHHHHH
T ss_pred --------------------------------------------------HHHHHHHHHHHHHhhccccHHHHHHHHHHH
Confidence 34567788888888 8999999999999
Q ss_pred HhcCCchHHHHHhHH
Q 007721 504 RNHSSSEHERLVYEG 518 (591)
Q Consensus 504 l~l~p~~~~a~~~~G 518 (591)
++.+|++...+..++
T Consensus 155 l~~~p~~~~~~~~l~ 169 (568)
T 2vsy_A 155 VAQGVGAVEPFAFLS 169 (568)
T ss_dssp HHHTCCCSCHHHHTT
T ss_pred HhcCCcccChHHHhC
Confidence 999999888887777
No 137
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.58 E-value=4.5e-14 Score=122.54 Aligned_cols=133 Identities=14% Similarity=0.140 Sum_probs=119.8
Q ss_pred HHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHH
Q 007721 353 FPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLV 431 (591)
Q Consensus 353 ~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~ 431 (591)
.+|..+|.++...|++++|+..++++++.+|+ ...+...+.++...|++++|+..|+++++++|++
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~------------- 68 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS------------- 68 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-------------
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCc-------------
Confidence 57889999999999999999999999999995 6777888999999999999999888888777754
Q ss_pred HHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchH
Q 007721 432 KLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEH 511 (591)
Q Consensus 432 ~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~ 511 (591)
+.+++++|.++..+|++++|+..++++++..|++.
T Consensus 69 ---------------------------------------------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 103 (136)
T 2fo7_A 69 ---------------------------------------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSA 103 (136)
T ss_dssp ---------------------------------------------HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCH
T ss_pred ---------------------------------------------hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCh
Confidence 34567788899999999999999999999999999
Q ss_pred HHHHhHHHHHHHcCCHHHHHHHHHHhhccccc
Q 007721 512 ERLVYEGWILYDTGHREEALSRAEKSISIERT 543 (591)
Q Consensus 512 ~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~ 543 (591)
.++..+|.+++.+|++++|+..+++++.++|.
T Consensus 104 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 104 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPR 135 (136)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHccCCC
Confidence 99999999999999999999999999999885
No 138
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.58 E-value=5.1e-17 Score=176.35 Aligned_cols=178 Identities=11% Similarity=0.027 Sum_probs=112.0
Q ss_pred HHHcCCCChHHHHhHHHHH------------HHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHH
Q 007721 344 ASELDPTLSFPYKYRAVAK------------MEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLA 410 (591)
Q Consensus 344 Ai~LdP~~~~ay~~rg~~l------------~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~ 410 (591)
++.++|++ +|.++|... ..++++++|+..|+++++.+|+ ...+..+|.++..+|+|++|+..|++
T Consensus 216 ~l~i~P~~--ay~~~g~~~~~ip~~~~l~y~~~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~ 293 (457)
T 1kt0_A 216 ILYLGPRY--GFGEAGKPKFGIEPNAELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGK 293 (457)
T ss_dssp EEEECGGG--TTCSSCBGGGTBCTTCCEEEEEEEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred EEEECccc--ccCCCCCcccCCCCCCEEEEEhhhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 45556653 555555432 2566777888888888888775 66677788888888888888888888
Q ss_pred HHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccc-hHHHHHHHHHcCCCCchhHhhhHHHHHH
Q 007721 411 LLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIG-SLAVINQMLINDPGKSFLRFRQSLLLLR 489 (591)
Q Consensus 411 al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~-al~~~~~al~~~P~~~~~~~~~g~~l~~ 489 (591)
|++++|++..+..... . ......+.+|.++...+...+++. |+..++++|+++|+++.+|+++|.++..
T Consensus 294 Al~~~p~~~~~~~~~~-----~-----~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~ 363 (457)
T 1kt0_A 294 IVSWLEMEYGLSEKES-----K-----ASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLL 363 (457)
T ss_dssp HHHHHTTCCSCCHHHH-----H-----HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHhcccccCChHHH-----H-----HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH
Confidence 8888887632110000 0 000001223333333333333444 4777777777777777777777777777
Q ss_pred hCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHH
Q 007721 490 LNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSR 533 (591)
Q Consensus 490 l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~ 533 (591)
+|++++|+..|++|++++|++.+++.++|.++..+|++++|...
T Consensus 364 ~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 364 MNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRR 407 (457)
T ss_dssp TTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777777777777777777777777777776643
No 139
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.58 E-value=3.9e-14 Score=137.00 Aligned_cols=188 Identities=13% Similarity=0.052 Sum_probs=152.2
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCChHHHHHHHHHHHHcC----CHHHHHHHHHH
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLSVDCLELRAWLFIAAD----DYESALRDTLA 410 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~~~~~~~r~~~~~~~g----~~~~A~~d~~~ 410 (591)
.+|+..|.++.+. .++.+++++|.++...+++++|+..|+++++.. ++.+++++|.++.. | |+++|+..|++
T Consensus 3 ~eA~~~~~~aa~~--g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g-~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~ 78 (212)
T 3rjv_A 3 TEPGSQYQQQAEA--GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQG-DGDALALLAQLKIR-NPQQADYPQARQLAEK 78 (212)
T ss_dssp -CTTHHHHHHHHT--TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT-CHHHHHHHHHHTTS-STTSCCHHHHHHHHHH
T ss_pred chHHHHHHHHHHC--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHc-CCCCCCHHHHHHHHHH
Confidence 4677889999875 899999999999999999999999999999653 57888999999888 7 99999999999
Q ss_pred HHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccc-hHHHHHHHHHcCC--CCchhHhhhHHHH
Q 007721 411 LLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIG-SLAVINQMLINDP--GKSFLRFRQSLLL 487 (591)
Q Consensus 411 al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~-al~~~~~al~~~P--~~~~~~~~~g~~l 487 (591)
+++. ++ ..+...++.+...-. .-..++. |+..++++++..| +++.+++++|.++
T Consensus 79 A~~~--g~------~~a~~~Lg~~y~~g~---------------g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y 135 (212)
T 3rjv_A 79 AVEA--GS------KSGEIVLARVLVNRQ---------------AGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIY 135 (212)
T ss_dssp HHHT--TC------HHHHHHHHHHHTCGG---------------GSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHH
T ss_pred HHHC--CC------HHHHHHHHHHHHcCC---------------CCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHH
Confidence 9654 44 234444443322200 0012333 5889999999999 5699999999999
Q ss_pred HH----hCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHc-C-----CHHHHHHHHHHhhcccccHHHHHHH
Q 007721 488 LR----LNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDT-G-----HREEALSRAEKSISIERTFEAFFLK 550 (591)
Q Consensus 488 ~~----l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~-g-----~~eeAl~~~e~ai~l~~~~~~~~~~ 550 (591)
.. .+++++|+..|++|+++ |.++++++++|.++... | ++++|+..|++|++.........+.
T Consensus 136 ~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~~~A~~~l~ 207 (212)
T 3rjv_A 136 ASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFDTGCEEFD 207 (212)
T ss_dssp HHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 99 88999999999999999 77889999999998765 4 8999999999999997766655554
No 140
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.58 E-value=1.7e-15 Score=164.40 Aligned_cols=141 Identities=12% Similarity=0.077 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCCh----------------HHHHHHHHHHHHc
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLSV----------------DCLELRAWLFIAA 398 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~~----------------~~~~~r~~~~~~~ 398 (591)
++|+..|+++++.+|+.+.+|.++|.++..+|++++|+..|++||+++|+. .++.++|.++..+
T Consensus 251 ~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~ 330 (457)
T 1kt0_A 251 EKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKL 330 (457)
T ss_dssp ECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 677778888899999999999999999999999999999999999999953 6788899999999
Q ss_pred CCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCch
Q 007721 399 DDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSF 478 (591)
Q Consensus 399 g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~ 478 (591)
|++++|+.+|++|++++|++. .++..++.+.....++++| +..|+++|+++|++..
T Consensus 331 g~~~~A~~~~~~al~~~p~~~------~a~~~~g~a~~~~g~~~~A------------------~~~~~~al~l~P~~~~ 386 (457)
T 1kt0_A 331 REYTKAVECCDKALGLDSANE------KGLYRRGEAQLLMNEFESA------------------KGDFEKVLEVNPQNKA 386 (457)
T ss_dssp TCHHHHHHHHHHHHHHSTTCH------HHHHHHHHHHHHTTCHHHH------------------HHHHHHHHTTC----C
T ss_pred cCHHHHHHHHHHHHhcCCccH------HHHHHHHHHHHHccCHHHH------------------HHHHHHHHHhCCCCHH
Confidence 999999999999999999873 3445555555555555555 8899999999999999
Q ss_pred hHhhhHHHHHHhCCHHHHHHH
Q 007721 479 LRFRQSLLLLRLNCQKAAMRC 499 (591)
Q Consensus 479 ~~~~~g~~l~~l~~~~eA~~~ 499 (591)
++.+++.++.++|+.++|.+.
T Consensus 387 a~~~l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 387 ARLQISMCQKKAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988754
No 141
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.57 E-value=5.4e-15 Score=133.28 Aligned_cols=115 Identities=10% Similarity=-0.025 Sum_probs=100.8
Q ss_pred HHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhh
Q 007721 373 SEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLY 451 (591)
Q Consensus 373 ~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~ 451 (591)
..|+++++++|+ ...++.+|..+...|++++|+..|+++++++|++
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~--------------------------------- 51 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYD--------------------------------- 51 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------------------------
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCcc---------------------------------
Confidence 567888888885 6778888999999999999988888877777765
Q ss_pred hccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHH
Q 007721 452 DRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEAL 531 (591)
Q Consensus 452 ~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl 531 (591)
+.+|+++|.++..+|++++|+..|++|++++|+++++++++|.++..+|++++|+
T Consensus 52 -------------------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~ 106 (142)
T 2xcb_A 52 -------------------------ARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAE 106 (142)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHH
T ss_pred -------------------------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHH
Confidence 4678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccccHH
Q 007721 532 SRAEKSISIERTFE 545 (591)
Q Consensus 532 ~~~e~ai~l~~~~~ 545 (591)
..|++++++.|+..
T Consensus 107 ~~~~~al~~~p~~~ 120 (142)
T 2xcb_A 107 SGFYSARALAAAQP 120 (142)
T ss_dssp HHHHHHHHHHHTCG
T ss_pred HHHHHHHHhCCCCc
Confidence 99999999998654
No 142
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.57 E-value=2.3e-14 Score=150.48 Aligned_cols=226 Identities=13% Similarity=-0.063 Sum_probs=163.7
Q ss_pred hhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHH
Q 007721 291 LAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLYNLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRA 370 (591)
Q Consensus 291 ~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~e 370 (591)
+...|..+...|++.+|+..+.+++...+..+ -+|..+.+|.++|.++..+|++++
T Consensus 104 ~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~------------------------~~~~~a~~~~~lg~~y~~~~~~~~ 159 (378)
T 3q15_A 104 LFFRGMYEFDQKEYVEAIGYYREAEKELPFVS------------------------DDIEKAEFHFKVAEAYYHMKQTHV 159 (378)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCC------------------------CHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCC------------------------ChHHHHHHHHHHHHHHHHcCCcHH
Confidence 44556666666666666665555554432110 013346789999999999999999
Q ss_pred HHHHHHHHHhcCCC--------hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccC
Q 007721 371 AISEIDRIIVFKLS--------VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWS 442 (591)
Q Consensus 371 Al~~~~~al~l~p~--------~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~ 442 (591)
|+..+++|+++.+. ..++.+.|.++..+|++++|+..|++|+++.+....-.....+...++.+....++++
T Consensus 160 A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~ 239 (378)
T 3q15_A 160 SMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQ 239 (378)
T ss_dssp HHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHH
Confidence 99999999998542 2356779999999999999999999999987643222233345555555555555555
Q ss_pred chhhhhhhhhccccccccchHHHHHHHHH-----cCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhc-----CCchHH
Q 007721 443 PADCWIKLYDRWSSVDDIGSLAVINQMLI-----NDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNH-----SSSEHE 512 (591)
Q Consensus 443 ~a~~~~~l~~~~~~~~~~~al~~~~~al~-----~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l-----~p~~~~ 512 (591)
+| +..++++++ .+|..+.+++++|.++.++|++++|+..+++|+++ +|....
T Consensus 240 ~A------------------~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 301 (378)
T 3q15_A 240 MA------------------VEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKE 301 (378)
T ss_dssp HH------------------HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCCSCHHH
T ss_pred HH------------------HHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 55 778888888 88888889999999999999999999999999988 455566
Q ss_pred HHHhHHHHHHHcCC---HHHHHHHHHHhhcccccHHHHHHHHHHhhhcC
Q 007721 513 RLVYEGWILYDTGH---REEALSRAEKSISIERTFEAFFLKAYILADTN 558 (591)
Q Consensus 513 a~~~~G~~l~~~g~---~eeAl~~~e~ai~l~~~~~~~~~~~~~~~~~~ 558 (591)
.+..++.++...|+ +++|+..+++.-......+.+...|..+...+
T Consensus 302 ~~~~l~~ly~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~la~~y~~~g 350 (378)
T 3q15_A 302 LFLFLQAVYKETVDERKIHDLLSYFEKKNLHAYIEACARSAAAVFESSC 350 (378)
T ss_dssp HHHHHHHHHSSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHCC
Confidence 77788888888888 88888888874333333336666666666554
No 143
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.57 E-value=2.8e-14 Score=125.11 Aligned_cols=116 Identities=13% Similarity=0.041 Sum_probs=88.0
Q ss_pred CCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchH
Q 007721 349 PTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSG 427 (591)
Q Consensus 349 P~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~ 427 (591)
|..+..|.++|..+...|++++|+..|+++|+++|+ +..+.++|.++..+|++++|+.+|+++++++|++
T Consensus 1 p~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--------- 71 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF--------- 71 (126)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------
T ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc---------
Confidence 445677788888888888888888888888888884 6777778888888888888877777777776654
Q ss_pred hHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcC
Q 007721 428 DHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHS 507 (591)
Q Consensus 428 ~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~ 507 (591)
+.+|+++|.++..+|++++|+..++++++++
T Consensus 72 -------------------------------------------------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 72 -------------------------------------------------VRAYIRKATAQIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp -------------------------------------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------------HHHHHHHHHHHHHHhCHHHHHHHHHHHHHhC
Confidence 3456777788888888888888888888888
Q ss_pred ------CchHHHHHhHHHHHH
Q 007721 508 ------SSEHERLVYEGWILY 522 (591)
Q Consensus 508 ------p~~~~a~~~~G~~l~ 522 (591)
|++.+++..++.+..
T Consensus 103 p~~~~~p~~~~~~~~l~~~~~ 123 (126)
T 3upv_A 103 AEVNNGSSAREIDQLYYKASQ 123 (126)
T ss_dssp HHHHTTTTHHHHHHHHHHHHH
T ss_pred cccCCchhHHHHHHHHHHHHH
Confidence 777777777666553
No 144
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.56 E-value=4.6e-14 Score=128.44 Aligned_cols=133 Identities=17% Similarity=0.128 Sum_probs=118.4
Q ss_pred hHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHH
Q 007721 352 SFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHL 430 (591)
Q Consensus 352 ~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~ 430 (591)
+..|..+|.++...|++++|+..|+++++++|+ +..+..+|.++..+|++++|+..|+++++++|++
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~------------ 80 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKY------------ 80 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------------
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc------------
Confidence 567899999999999999999999999999995 7888899999999999999999988888888764
Q ss_pred HHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCch
Q 007721 431 VKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSE 510 (591)
Q Consensus 431 ~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~ 510 (591)
+.+++++|.++..+|++++|+..++++++++|++
T Consensus 81 ----------------------------------------------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~ 114 (166)
T 1a17_A 81 ----------------------------------------------IKGYYRRAASNMALGKFRAALRDYETVVKVKPHD 114 (166)
T ss_dssp ----------------------------------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred ----------------------------------------------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Confidence 3567889999999999999999999999999999
Q ss_pred HHHHHhHHHH--HHHcCCHHHHHHHHHHhhcccc
Q 007721 511 HERLVYEGWI--LYDTGHREEALSRAEKSISIER 542 (591)
Q Consensus 511 ~~a~~~~G~~--l~~~g~~eeAl~~~e~ai~l~~ 542 (591)
..++.+++.+ +..+|++++|+..++++..+-+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 148 (166)
T 1a17_A 115 KDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVD 148 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccchHHHhc
Confidence 9999666555 8889999999999998876543
No 145
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.56 E-value=1.5e-14 Score=134.09 Aligned_cols=107 Identities=16% Similarity=0.180 Sum_probs=90.2
Q ss_pred eEEEE-cCeEEEhhHHHHhhcCHHHHHhhcC-CCC-CCCCceeEecCCCCCHHHHHHHHHHHhcCC--------------
Q 007721 57 VTFCV-RDKEISFVRNKIASLSSPFKAMLYG-GFV-ESKRKTIDFSHDGVSVEGLRAVEVYTRTSR-------------- 119 (591)
Q Consensus 57 V~f~v-~g~~~~aHr~iLaa~S~yF~amf~~-~~~-Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~-------------- 119 (591)
|+++. +|+.|++||.+ |..|+||++||.+ ++. |+....|.| ++|++.+|+.|++|+|++.
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl--~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~ 79 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPL--PNVNAAILKKVIQWCTHHKDDPPPPEDDENKEK 79 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEEC--TTSCHHHHHHHHHHHHHTTTCCC----------
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCC--CCccHHHHHHHHHHHHHcCcCCCCccccccccc
Confidence 67765 79999999999 8999999999998 888 788889999 9999999999999999988
Q ss_pred ------------CCCCChhHHHHHHHHHhhhChHHHHHHHHHHHHhhcCC--HHhHHHHHHH
Q 007721 120 ------------VDLFCPGIVLELLSFANRFCCEEMKSACDAHLASLVGD--IEDALILIDY 167 (591)
Q Consensus 120 ------------~~~~~~~~v~~lL~~A~~~~i~~L~~~C~~~L~~~i~~--~~n~~~ll~~ 167 (591)
+. ++.+++++|+.+||+++|..|.+.|++++...+.. ++.+-.++.+
T Consensus 80 ~~~~i~~wD~~F~~-id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I 140 (159)
T 2ast_A 80 RTDDIPVWDQEFLK-VDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI 140 (159)
T ss_dssp -CCCCCHHHHHHTC-SCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTC
T ss_pred chhhhhHHHHHHHc-CCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCC
Confidence 66 89999999999999999999999999999998872 3444444443
No 146
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.55 E-value=2.2e-14 Score=145.10 Aligned_cols=168 Identities=14% Similarity=0.068 Sum_probs=139.0
Q ss_pred CCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchH
Q 007721 349 PTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSG 427 (591)
Q Consensus 349 P~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~ 427 (591)
|+.+.++..+|.++...|++++|+..|+++|+++|+ +..+.++|.++..+|++++|+.+|+++++++|++. .+
T Consensus 1 p~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~------~~ 74 (281)
T 2c2l_A 1 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSV------KA 74 (281)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCH------HH
T ss_pred ChhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCH------HH
Confidence 778899999999999999999999999999999995 78889999999999999999999999999999984 34
Q ss_pred hHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcC
Q 007721 428 DHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHS 507 (591)
Q Consensus 428 ~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~ 507 (591)
...++.+....+++++| +..++++++++|+++..+........ +...+...........
T Consensus 75 ~~~lg~~~~~~g~~~~A------------------~~~~~~al~l~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 133 (281)
T 2c2l_A 75 HFFLGQCQLEMESYDEA------------------IANLQRAYSLAKEQRLNFGDDIPSAL---RIAKKKRWNSIEERRI 133 (281)
T ss_dssp HHHHHHHHHHTTCHHHH------------------HHHHHHHHHHHHHTTCCCCSHHHHHH---HHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHcCCHHHH------------------HHHHHHHHHhCccchhhHHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 45555555555666666 88999999999988665544333333 3344555566677788
Q ss_pred CchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH
Q 007721 508 SSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFE 545 (591)
Q Consensus 508 p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~ 545 (591)
|.+++....+|-.+ .|++++|++.|++|++++|+..
T Consensus 134 ~~~~~i~~~l~~l~--~~~~~~A~~~~~~al~~~p~~~ 169 (281)
T 2c2l_A 134 HQESELHSYLTRLI--AAERERELEECQRNHEGHEDDG 169 (281)
T ss_dssp CCCCHHHHHHHHHH--HHHHHHHHTTTSGGGTTTSCHH
T ss_pred hhhHHHHHHHHHHH--HHHHHHHHHHHHhhhccccchh
Confidence 99999988888865 7999999999999999999865
No 147
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.55 E-value=3e-14 Score=131.22 Aligned_cols=118 Identities=17% Similarity=0.067 Sum_probs=95.4
Q ss_pred CCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhch
Q 007721 348 DPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVS 426 (591)
Q Consensus 348 dP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~ 426 (591)
+|..+.+|..+|.++...|++++|+..|+++|+++|+ +..+.++|.++..+|++++|+.+|+++++++|++
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~-------- 78 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKY-------- 78 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--------
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC--------
Confidence 4566778888888888888888888888888888884 7777888888888888888888877777777754
Q ss_pred HhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhc
Q 007721 427 GDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNH 506 (591)
Q Consensus 427 ~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l 506 (591)
+.+|+++|.++..+|++++|+..|++++++
T Consensus 79 --------------------------------------------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 108 (164)
T 3sz7_A 79 --------------------------------------------------SKAWSRLGLARFDMADYKGAKEAYEKGIEA 108 (164)
T ss_dssp --------------------------------------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 356778888888888888888888888888
Q ss_pred CCchHHHHHhHHHHHHH
Q 007721 507 SSSEHERLVYEGWILYD 523 (591)
Q Consensus 507 ~p~~~~a~~~~G~~l~~ 523 (591)
+|++.++++++|+....
T Consensus 109 ~p~~~~~~~~~~l~~~~ 125 (164)
T 3sz7_A 109 EGNGGSDAMKRGLETTK 125 (164)
T ss_dssp HSSSCCHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHH
Confidence 88888888887776543
No 148
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.53 E-value=5.7e-14 Score=124.59 Aligned_cols=109 Identities=9% Similarity=0.009 Sum_probs=92.8
Q ss_pred CChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHh
Q 007721 350 TLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGD 428 (591)
Q Consensus 350 ~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~ 428 (591)
+.+.+|.++|+++...|++++|+..|++||+++|+ +..+.++|.++..+|++++|+.+|+++++++|++...+
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~------ 79 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADY------ 79 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCH------
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhh------
Confidence 45678999999999999999999999999999996 78889999999999999999999999999999862100
Q ss_pred HHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCC
Q 007721 429 HLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSS 508 (591)
Q Consensus 429 ~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p 508 (591)
. .-+.+|+++|.++..+|++++|+..|++|+...|
T Consensus 80 ~---------------------------------------------~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~ 114 (127)
T 4gcn_A 80 K---------------------------------------------LIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFR 114 (127)
T ss_dssp H---------------------------------------------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred H---------------------------------------------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCc
Confidence 0 0124577888888888888888888888888887
Q ss_pred c
Q 007721 509 S 509 (591)
Q Consensus 509 ~ 509 (591)
+
T Consensus 115 ~ 115 (127)
T 4gcn_A 115 D 115 (127)
T ss_dssp C
T ss_pred C
Confidence 6
No 149
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.53 E-value=2.6e-13 Score=129.46 Aligned_cols=133 Identities=14% Similarity=0.185 Sum_probs=115.6
Q ss_pred HHHHHHHhhhHHhhhccHHHHHHHHHHHhhccccchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcCCc
Q 007721 255 RMLALHQLGCVMFEREEYKDACYYFEAAADAGHIYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLYNLG 334 (591)
Q Consensus 255 ~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~~~ 334 (591)
....++++|..+...|++++|+..|++++.. ...++..+|.++...|++
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~-~~~~~~~lg~~~~~~g~~------------------------------ 53 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQDP-HSRICFNIGCMYTILKNM------------------------------ 53 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSSSC-CHHHHHHHHHHHHHTTCH------------------------------
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHcCC-ChHHHHHHHHHHHHcCCH------------------------------
Confidence 4567889999999999999999999988643 344666677777777665
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-h----------------HHHHHHHHHHHH
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-V----------------DCLELRAWLFIA 397 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~----------------~~~~~r~~~~~~ 397 (591)
++|+..|+++++++|+++.+|.++|.++..+|++++|+..|++++++.|+ . ..++++|.++..
T Consensus 54 ~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 133 (213)
T 1hh8_A 54 TEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK 133 (213)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH
Confidence 66777888899999999999999999999999999999999999998774 4 678899999999
Q ss_pred cCCHHHHHHHHHHHHhcCCcc
Q 007721 398 ADDYESALRDTLALLALESNY 418 (591)
Q Consensus 398 ~g~~~~A~~d~~~al~l~P~~ 418 (591)
+|++++|+..|+++++++|++
T Consensus 134 ~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 134 KEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp TTCHHHHHHHHHHHHTTCCSG
T ss_pred ccCHHHHHHHHHHHHHcCccc
Confidence 999999999999999999986
No 150
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.52 E-value=4.5e-14 Score=142.36 Aligned_cols=160 Identities=8% Similarity=0.008 Sum_probs=124.5
Q ss_pred HHHHHHHHHHHHcCCCChHHHHh---------------------HHHHHHHhCCHHHHHHHHHHHHhcCCChHHHHHHHH
Q 007721 335 REKIVDLNYASELDPTLSFPYKY---------------------RAVAKMEEGQIRAAISEIDRIIVFKLSVDCLELRAW 393 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~---------------------rg~~l~~l~~~~eAl~~~~~al~l~p~~~~~~~r~~ 393 (591)
.+++-.+.+++++.|+...++++ .|.+|...|+|++|.+.|+.++...|+....+.+|.
T Consensus 64 ~~a~~~~~~~l~l~p~~l~a~~~~~g~y~~~~~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~~~~~~a~ 143 (282)
T 4f3v_A 64 RRNFGQLSGSVQISMSTLNARIAIGGLYGDITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHLVAWMKAV 143 (282)
T ss_dssp GGGTTHHHHTTTCCGGGGCCEEECCTTTCCCEEECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCChhhhhhhhccCCcccccccccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchHHHHHHHH
Confidence 45555667777777777666666 778899999999999999999988885337788999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcC
Q 007721 394 LFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLIND 473 (591)
Q Consensus 394 ~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~ 473 (591)
++.+.|||++|+..|+++.+..+.+ ....+...++.+...+.++++| +..|++++...
T Consensus 144 l~~~~~r~~dA~~~l~~a~~~~d~~----~~~~a~~~LG~al~~LG~~~eA------------------l~~l~~a~~g~ 201 (282)
T 4f3v_A 144 VYGAAERWTDVIDQVKSAGKWPDKF----LAGAAGVAHGVAAANLALFTEA------------------ERRLTEANDSP 201 (282)
T ss_dssp HHHHTTCHHHHHHHHTTGGGCSCHH----HHHHHHHHHHHHHHHTTCHHHH------------------HHHHHHHHTST
T ss_pred HHHHcCCHHHHHHHHHHhhccCCcc----cHHHHHHHHHHHHHHCCCHHHH------------------HHHHHHHhcCC
Confidence 9999999999999999887764322 1123555556666666666666 78888888654
Q ss_pred --CC-CchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhH
Q 007721 474 --PG-KSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYE 517 (591)
Q Consensus 474 --P~-~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~ 517 (591)
|. .+++++++|.+|.++|+.+||...|++++..+|+ +.+..-+
T Consensus 202 ~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~aL 247 (282)
T 4f3v_A 202 AGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAAAL 247 (282)
T ss_dssp TTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHHHH
Confidence 66 6789999999999999999999999999999999 7665433
No 151
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.52 E-value=7.8e-14 Score=128.44 Aligned_cols=114 Identities=14% Similarity=0.047 Sum_probs=103.9
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHH
Q 007721 385 VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLA 464 (591)
Q Consensus 385 ~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~ 464 (591)
...++.+|.++...|++++|+..|+++++++|++
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~---------------------------------------------- 44 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSIAPAN---------------------------------------------- 44 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC----------------------------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcC----------------------------------------------
Confidence 5667888999999999999998888888887764
Q ss_pred HHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccH
Q 007721 465 VINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTF 544 (591)
Q Consensus 465 ~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~ 544 (591)
+.+|+++|.++..+|++++|+..|++|++++|+++.+++++|.+++.+|++++|+..|+++++++|++
T Consensus 45 ------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 112 (164)
T 3sz7_A 45 ------------PIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNG 112 (164)
T ss_dssp ------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSS
T ss_pred ------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc
Confidence 46788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHHHHHhhh
Q 007721 545 E-AFFLKAYILAD 556 (591)
Q Consensus 545 ~-~~~~~~~~~~~ 556 (591)
. +++.++++..-
T Consensus 113 ~~~~~~~~l~~~~ 125 (164)
T 3sz7_A 113 GSDAMKRGLETTK 125 (164)
T ss_dssp CCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 8 88999988654
No 152
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.52 E-value=1.5e-13 Score=140.58 Aligned_cols=206 Identities=12% Similarity=0.075 Sum_probs=138.3
Q ss_pred HHHhhhHHhhhccHHHHHHHHHHHhhccc--------cchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHh
Q 007721 259 LHQLGCVMFEREEYKDACYYFEAAADAGH--------IYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSL 330 (591)
Q Consensus 259 ~~~lG~~~~~~g~~~eA~~~f~~Al~~~~--------~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~ 330 (591)
+...|.++...|++++|+.+|.+|+++.+ ..++..+|.++..+|++++|+..+.+++...+..|
T Consensus 39 ~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g-------- 110 (307)
T 2ifu_A 39 YAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENG-------- 110 (307)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTT--------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC--------
Confidence 44456667777777777777777776621 12344445555555555555444444444322111
Q ss_pred cCCcHHHHHHHHHHHHcCC-CChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-------hHHHHHHHHHHHHcCCHH
Q 007721 331 YNLGREKIVDLNYASELDP-TLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-------VDCLELRAWLFIAADDYE 402 (591)
Q Consensus 331 y~~~~eA~~dl~~Ai~LdP-~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-------~~~~~~r~~~~~~~g~~~ 402 (591)
+| ..+.+|.++|.++.. |++++|+..|++|+++.|. ..++.++|.++..+|+++
T Consensus 111 -----------------~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~ 172 (307)
T 2ifu_A 111 -----------------TPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFD 172 (307)
T ss_dssp -----------------CHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred -----------------CHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHH
Confidence 00 124678999999999 9999999999999999763 345678899999999999
Q ss_pred HHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhh
Q 007721 403 SALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFR 482 (591)
Q Consensus 403 ~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~ 482 (591)
+|+..|++++++.|+.... +....++++
T Consensus 173 ~A~~~~~~al~~~~~~~~~----------------------------------------------------~~~~~~~~~ 200 (307)
T 2ifu_A 173 EAAASLQKEKSMYKEMENY----------------------------------------------------PTCYKKCIA 200 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCH----------------------------------------------------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCh----------------------------------------------------hHHHHHHHH
Confidence 9999999999999865100 011245788
Q ss_pred hHHHHHHhCCHHHHHHHHHHHHhcCCchHHH-----HHhHHHHHHHcCCHHHHHH--HHHHhhcccccH
Q 007721 483 QSLLLLRLNCQKAAMRCLRLARNHSSSEHER-----LVYEGWILYDTGHREEALS--RAEKSISIERTF 544 (591)
Q Consensus 483 ~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a-----~~~~G~~l~~~g~~eeAl~--~~e~ai~l~~~~ 544 (591)
+|.++..+|++++|+..|++++ ++|+.... +..++.. +..|+.++.-. .|.....++|..
T Consensus 201 ~g~~~~~~g~~~~A~~~~~~al-~~p~~~~~~e~~~l~~l~~~-~~~~d~~~~~~~~~~~~~~~ld~~~ 267 (307)
T 2ifu_A 201 QVLVQLHRADYVAAQKCVRESY-SIPGFSGSEDCAALEDLLQA-YDEQDEEQLLRVCRSPLVTYMDNDY 267 (307)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHT-TSTTSTTSHHHHHHHHHHHH-HHTTCHHHHHHHTTSHHHHTSCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHh-CCCCCCCCHHHHHHHHHHHH-HHhcCHHHHHHHHhCchhhhhhHHH
Confidence 9999999999999999999999 99976543 3333333 36676543322 244444444443
No 153
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.51 E-value=4e-15 Score=162.33 Aligned_cols=138 Identities=17% Similarity=0.163 Sum_probs=122.1
Q ss_pred CChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHh
Q 007721 350 TLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGD 428 (591)
Q Consensus 350 ~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~ 428 (591)
+.+.+|.++|.++..+|++++|+..|++|++++|+ ...+.++|.++..+|++++|+.+|++|++++|++
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~---------- 73 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKY---------- 73 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC----------
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC----------
Confidence 34667889999999999999999999999999996 7888999999999999999999999888888865
Q ss_pred HHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCC
Q 007721 429 HLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSS 508 (591)
Q Consensus 429 ~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p 508 (591)
+.+++++|.++..+|++++|+..|++|++++|
T Consensus 74 ------------------------------------------------~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p 105 (477)
T 1wao_1 74 ------------------------------------------------IKGYYRRAASNMALGKFRAALRDYETVVKVKP 105 (477)
T ss_dssp ------------------------------------------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST
T ss_pred ------------------------------------------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 35688999999999999999999999999999
Q ss_pred chHHHHHhHHHH--HHHcCCHHHHHHHHH-----------HhhcccccHH
Q 007721 509 SEHERLVYEGWI--LYDTGHREEALSRAE-----------KSISIERTFE 545 (591)
Q Consensus 509 ~~~~a~~~~G~~--l~~~g~~eeAl~~~e-----------~ai~l~~~~~ 545 (591)
++.+++.++|.+ +..+|++++|++.|+ ++++++|++.
T Consensus 106 ~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~ 155 (477)
T 1wao_1 106 HDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYS 155 (477)
T ss_dssp TCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhcccccccc
Confidence 999999999999 999999999999999 9999988764
No 154
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.50 E-value=2.1e-13 Score=118.98 Aligned_cols=121 Identities=17% Similarity=0.119 Sum_probs=108.3
Q ss_pred CCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhch
Q 007721 348 DPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVS 426 (591)
Q Consensus 348 dP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~ 426 (591)
.|..+.+|+.+|.++...|++++|+..|+++++.+|+ ...+..+|.++..+|++++|+..|+++++++|++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-------- 83 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTF-------- 83 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTC--------
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc--------
Confidence 5777889999999999999999999999999999995 7888889999999999999999888888877754
Q ss_pred HhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhc
Q 007721 427 GDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNH 506 (591)
Q Consensus 427 ~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l 506 (591)
+.+++++|.++..+|++++|+..+++++++
T Consensus 84 --------------------------------------------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 84 --------------------------------------------------IKGYTRKAAALEAMKDYTKAMDVYQKALDL 113 (133)
T ss_dssp --------------------------------------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 356788899999999999999999999999
Q ss_pred CCchHHHHHhHHHHHHHcCC
Q 007721 507 SSSEHERLVYEGWILYDTGH 526 (591)
Q Consensus 507 ~p~~~~a~~~~G~~l~~~g~ 526 (591)
+|++.+++..+|.++..+|+
T Consensus 114 ~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 114 DSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp CGGGTHHHHHHHHHHHHHTC
T ss_pred CCCchHHHHHHHHHHHHhcC
Confidence 99999999999999998875
No 155
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.50 E-value=3.5e-13 Score=136.44 Aligned_cols=180 Identities=11% Similarity=0.008 Sum_probs=137.9
Q ss_pred CCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hH------HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchh
Q 007721 348 DPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VD------CLELRAWLFIAADDYESALRDTLALLALESNYMM 420 (591)
Q Consensus 348 dP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~------~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~ 420 (591)
+|+....+...+..+...|++++|+..+.++++..|. .. .++..|.++...|++++|+..|++++++.++...
T Consensus 71 ~~~~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~ 150 (293)
T 2qfc_A 71 DIERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGID 150 (293)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSC
T ss_pred chhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCc
Confidence 4455566777888888889999999999988888764 21 1344667788888999999999999888776533
Q ss_pred hhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHH---HcCCCCc----hhHhhhHHHHHHhCCH
Q 007721 421 FHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQML---INDPGKS----FLRFRQSLLLLRLNCQ 493 (591)
Q Consensus 421 ~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al---~~~P~~~----~~~~~~g~~l~~l~~~ 493 (591)
..+...+....+.+....+++++| +..+++++ +..|.+. .+++++|.++..+|++
T Consensus 151 ~~~~~~~~~~lg~~y~~~~~~~~A------------------~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y 212 (293)
T 2qfc_A 151 VYQNLYIENAIANIYAENGYLKKG------------------IDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRY 212 (293)
T ss_dssp TTHHHHHHHHHHHHHHHTTCHHHH------------------HHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHHHHHHHHHHHcCCHHHH------------------HHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhH
Confidence 333333555555555555555555 77888888 5566543 6899999999999999
Q ss_pred HHHHHHHHHHHhcCCc------hHHHHHhHHHHHHHcCCHHHH-HHHHHHhhcccccHH
Q 007721 494 KAAMRCLRLARNHSSS------EHERLVYEGWILYDTGHREEA-LSRAEKSISIERTFE 545 (591)
Q Consensus 494 ~eA~~~~~~Al~l~p~------~~~a~~~~G~~l~~~g~~eeA-l~~~e~ai~l~~~~~ 545 (591)
++|+..+++|+++.++ -+.+++++|.++..+|++++| ...|++|+.+...+.
T Consensus 213 ~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~~~ 271 (293)
T 2qfc_A 213 EESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILE 271 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999755 388999999999999999999 777999998755443
No 156
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.49 E-value=2.9e-13 Score=118.57 Aligned_cols=101 Identities=9% Similarity=0.031 Sum_probs=91.2
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHH
Q 007721 385 VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLA 464 (591)
Q Consensus 385 ~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~ 464 (591)
...+..+|..+...|++++|+..|+++++++|++
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---------------------------------------------- 37 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED---------------------------------------------- 37 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----------------------------------------------
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC----------------------------------------------
Confidence 4567778888888999988888888877777764
Q ss_pred HHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhccccc
Q 007721 465 VINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERT 543 (591)
Q Consensus 465 ~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~ 543 (591)
+.+|+++|.++.++|++++|+..+++|++++|+++.+++++|.++..+|++++|+..|+++++++|+
T Consensus 38 ------------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 104 (126)
T 3upv_A 38 ------------ARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAE 104 (126)
T ss_dssp ------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ------------hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcc
Confidence 4678999999999999999999999999999999999999999999999999999999999999943
No 157
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.49 E-value=6e-14 Score=130.50 Aligned_cols=124 Identities=12% Similarity=0.075 Sum_probs=67.7
Q ss_pred HHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhccc
Q 007721 363 MEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSW 441 (591)
Q Consensus 363 ~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~ 441 (591)
...|++++|+..++++++.+|+ +..+..+|.++...|++++|+..|+++++++|++
T Consensus 21 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~----------------------- 77 (177)
T 2e2e_A 21 ASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGEN----------------------- 77 (177)
T ss_dssp C-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSC-----------------------
T ss_pred hhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC-----------------------
Confidence 3455566666666666666663 4555556666666666666666555555555543
Q ss_pred CchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHH-HHHhCCH--HHHHHHHHHHHhcCCchHHHHHhHH
Q 007721 442 SPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLL-LLRLNCQ--KAAMRCLRLARNHSSSEHERLVYEG 518 (591)
Q Consensus 442 ~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~-l~~l~~~--~eA~~~~~~Al~l~p~~~~a~~~~G 518 (591)
+.+++++|.+ +...|++ ++|+..++++++++|++..+++++|
T Consensus 78 -----------------------------------~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 122 (177)
T 2e2e_A 78 -----------------------------------AELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLA 122 (177)
T ss_dssp -----------------------------------HHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred -----------------------------------HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 2234445555 4455555 5555555555555555555555666
Q ss_pred HHHHHcCCHHHHHHHHHHhhcccccH
Q 007721 519 WILYDTGHREEALSRAEKSISIERTF 544 (591)
Q Consensus 519 ~~l~~~g~~eeAl~~~e~ai~l~~~~ 544 (591)
.+++.+|++++|+..|++++++.|+.
T Consensus 123 ~~~~~~g~~~~A~~~~~~al~~~p~~ 148 (177)
T 2e2e_A 123 SDAFMQANYAQAIELWQKVMDLNSPR 148 (177)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTCCTT
T ss_pred HHHHHcccHHHHHHHHHHHHhhCCCC
Confidence 66666666666666666665555543
No 158
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.49 E-value=1.8e-13 Score=118.44 Aligned_cols=126 Identities=17% Similarity=0.102 Sum_probs=111.5
Q ss_pred HHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhh
Q 007721 345 SELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHG 423 (591)
Q Consensus 345 i~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~ 423 (591)
.+.+|..+.+|..+|.++...|++++|+..|+++++.+|+ +..+..+|.++..+|++++|+..|+++++++|++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~----- 79 (131)
T 2vyi_A 5 SEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAY----- 79 (131)
T ss_dssp --CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----
T ss_pred hhcchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccC-----
Confidence 4456778889999999999999999999999999999995 7778889999999999999999888888887764
Q ss_pred hchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHH
Q 007721 424 RVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLA 503 (591)
Q Consensus 424 ~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~A 503 (591)
+.+++++|.++..+|++++|+..++++
T Consensus 80 -----------------------------------------------------~~~~~~~~~~~~~~~~~~~A~~~~~~~ 106 (131)
T 2vyi_A 80 -----------------------------------------------------SKAYGRMGLALSSLNKHVEAVAYYKKA 106 (131)
T ss_dssp -----------------------------------------------------HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred -----------------------------------------------------HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 346788999999999999999999999
Q ss_pred HhcCCchHHHHHhHHHHHHHcCCHH
Q 007721 504 RNHSSSEHERLVYEGWILYDTGHRE 528 (591)
Q Consensus 504 l~l~p~~~~a~~~~G~~l~~~g~~e 528 (591)
++++|++..++..+|.++..+|+++
T Consensus 107 ~~~~p~~~~~~~~l~~~~~~~~~~~ 131 (131)
T 2vyi_A 107 LELDPDNETYKSNLKIAELKLREAP 131 (131)
T ss_dssp HHHSTTCHHHHHHHHHHHHHHTTCC
T ss_pred HhcCccchHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999998863
No 159
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.48 E-value=1.4e-13 Score=121.01 Aligned_cols=101 Identities=11% Similarity=-0.060 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHH
Q 007721 387 CLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVI 466 (591)
Q Consensus 387 ~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~ 466 (591)
.++.+|..+...|++++|+..|+++++++|++
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~------------------------------------------------ 50 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPER------------------------------------------------ 50 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC------------------------------------------------
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC------------------------------------------------
Confidence 35667777788888888877777766666654
Q ss_pred HHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH
Q 007721 467 NQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFE 545 (591)
Q Consensus 467 ~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~ 545 (591)
+.+|+++|.++..+|++++|+..|++|++++|+++++++++|.++..+|++++|+..|+++++++|++.
T Consensus 51 ----------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 51 ----------EEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp ----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred ----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCC
Confidence 578999999999999999999999999999999999999999999999999999999999999999874
No 160
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.48 E-value=1.8e-13 Score=125.76 Aligned_cols=116 Identities=9% Similarity=-0.007 Sum_probs=83.8
Q ss_pred ChHHHHhHHHHHHHhCCHHHHHHHHHHHHhc------------------CCC-hHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 007721 351 LSFPYKYRAVAKMEEGQIRAAISEIDRIIVF------------------KLS-VDCLELRAWLFIAADDYESALRDTLAL 411 (591)
Q Consensus 351 ~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l------------------~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~a 411 (591)
.+..+..+|..+...|++++|+..|++||++ +|. ...+.++|.++..+|++++|+.+++++
T Consensus 10 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 89 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEV 89 (162)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 3567889999999999999999999999998 443 455666777777777777777776666
Q ss_pred HhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhC
Q 007721 412 LALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLN 491 (591)
Q Consensus 412 l~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~ 491 (591)
++++|++ +.+|+++|.++..+|
T Consensus 90 l~~~p~~----------------------------------------------------------~~a~~~~g~~~~~~g 111 (162)
T 3rkv_A 90 LKREETN----------------------------------------------------------EKALFRRAKARIAAW 111 (162)
T ss_dssp HHHSTTC----------------------------------------------------------HHHHHHHHHHHHHTT
T ss_pred HhcCCcc----------------------------------------------------------hHHHHHHHHHHHHHh
Confidence 6666654 345677777777777
Q ss_pred CHHHHHHHHHHHHhcCCchH-HHHHhHHHHHHHc
Q 007721 492 CQKAAMRCLRLARNHSSSEH-ERLVYEGWILYDT 524 (591)
Q Consensus 492 ~~~eA~~~~~~Al~l~p~~~-~a~~~~G~~l~~~ 524 (591)
++++|+..|++|++++|++. .+...++.+.-..
T Consensus 112 ~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~ 145 (162)
T 3rkv_A 112 KLDEAEEDLKLLLRNHPAAASVVAREMKIVTERR 145 (162)
T ss_dssp CHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 77777777777777777776 4455555554433
No 161
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.48 E-value=1.3e-12 Score=153.52 Aligned_cols=289 Identities=15% Similarity=0.067 Sum_probs=194.9
Q ss_pred chhHHHHHHHHhhcchhhhH--HHHHHHHhhhHHhhhccHHHHHHHHHHHhhccccchhhhhHHHHHHhCChHHHHHHHH
Q 007721 235 SNTTVMLLERLGECSTERWQ--RMLALHQLGCVMFEREEYKDACYYFEAAADAGHIYSLAGLARAKYKVGQQYSAYKLIN 312 (591)
Q Consensus 235 ~~~~v~lLe~~~~~~~~~~~--~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~~~a~~~la~~~~~~G~~~~A~~~~~ 312 (591)
...+.+++++.+.-++.+.. ...-+.-+..+....++..+.+.-.+..+ .-..|.++...|.+++|...|.
T Consensus 1001 p~EaieLLEKivl~~s~fs~n~~LqnlLi~tAIkaD~~Rv~eyI~kLd~~d-------~~eIA~Iai~lglyEEAf~IYk 1073 (1630)
T 1xi4_A 1001 PNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYD-------APDIANIAISNELFEEAFAIFR 1073 (1630)
T ss_pred HHHHHHHHHHHHcCCCcccccHHHHHHHHHHHHHhChhhHHHHHHHhhhcc-------HHHHHHHHHhCCCHHHHHHHHH
Confidence 44567788887633321111 11112234445555566665555444222 2236778888899999988888
Q ss_pred HHHHhcCCC-HHHHHHHHhcCCcHHHHHHHHHHHHcC--CCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCChHHHH
Q 007721 313 SIISEHKPT-GWMYQERSLYNLGREKIVDLNYASELD--PTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLSVDCLE 389 (591)
Q Consensus 313 ~aI~~~~~~-g~a~~~r~~y~~~~eA~~dl~~Ai~Ld--P~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~~~~~~ 389 (591)
++- .... ...+. +++..+++|+++. .+.+.+|.++|.++...|++++|+..|.|| -++..+.
T Consensus 1074 Ka~--~~~~A~~VLi---------e~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA----dD~say~ 1138 (1630)
T 1xi4_A 1074 KFD--VNTSAVQVLI---------EHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA----DDPSSYM 1138 (1630)
T ss_pred HcC--CHHHHHHHHH---------HHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc----CChHHHH
Confidence 863 1111 11222 2333444444443 467888999999999999999999999776 4467777
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCcc-hh-----hhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccc-h
Q 007721 390 LRAWLFIAADDYESALRDTLALLALESNY-MM-----FHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIG-S 462 (591)
Q Consensus 390 ~r~~~~~~~g~~~~A~~d~~~al~l~P~~-~~-----~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~-a 462 (591)
..+.++..+|+|++|++.|..|++.+|+. +. .+.+. .....+....+....+ .|.+++++..+.++++ |
T Consensus 1139 eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl---~rleele~fI~~~n~a-d~~~iGd~le~eg~YeeA 1214 (1630)
T 1xi4_A 1139 EVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKT---NRLAELEEFINGPNNA-HIQQVGDRCYDEKMYDAA 1214 (1630)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhh---cCHHHHHHHHhCCCHH-HHHHHHHHHHhcCCHHHH
Confidence 78888999999999999999999888652 11 11111 1112233333333343 4567888888888888 7
Q ss_pred HHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCC-------------------------chHHHHHhH
Q 007721 463 LAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSS-------------------------SEHERLVYE 517 (591)
Q Consensus 463 l~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p-------------------------~~~~a~~~~ 517 (591)
...|.+| ..|.++|.+|.++|++++|++.+++|...++ .+++-+..+
T Consensus 1215 ~~~Y~kA--------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeel 1286 (1630)
T 1xi4_A 1215 KLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEEL 1286 (1630)
T ss_pred HHHHHhh--------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHH
Confidence 7788885 5899999999999999999999999966655 245566777
Q ss_pred HHHHHHcCCHHHHHHHHHHhhcccccHH-HHHHHHHHhhhc
Q 007721 518 GWILYDTGHREEALSRAEKSISIERTFE-AFFLKAYILADT 557 (591)
Q Consensus 518 G~~l~~~g~~eeAl~~~e~ai~l~~~~~-~~~~~~~~~~~~ 557 (591)
+..+...|+|+||+..+|+++.++|.-. .|-..|.+++..
T Consensus 1287 i~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLyaKy 1327 (1630)
T 1xi4_A 1287 INYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKF 1327 (1630)
T ss_pred HHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHHhC
Confidence 8888999999999999999999999888 555667666654
No 162
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.47 E-value=4e-13 Score=123.38 Aligned_cols=121 Identities=12% Similarity=0.017 Sum_probs=102.7
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHH
Q 007721 385 VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLA 464 (591)
Q Consensus 385 ~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~ 464 (591)
...+..+|..+...|+|++|+..|++++++-|.... ......
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~-----------------~~~~~~--------------------- 52 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLIL-----------------REKPGE--------------------- 52 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH-----------------TSCTTS---------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcc-----------------cCCCCH---------------------
Confidence 345678999999999999999999999999543210 000000
Q ss_pred HHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccH
Q 007721 465 VINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTF 544 (591)
Q Consensus 465 ~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~ 544 (591)
......+|.++.+|+++|.++.++|++++|+..+++|++++|+++.+++.+|.+++.+|++++|+..|++|++++|++
T Consensus 53 --~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~ 130 (162)
T 3rkv_A 53 --PEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAA 130 (162)
T ss_dssp --HHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGG
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCC
Confidence 011345688899999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred H
Q 007721 545 E 545 (591)
Q Consensus 545 ~ 545 (591)
.
T Consensus 131 ~ 131 (162)
T 3rkv_A 131 A 131 (162)
T ss_dssp H
T ss_pred H
Confidence 7
No 163
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.46 E-value=3.9e-14 Score=134.71 Aligned_cols=171 Identities=11% Similarity=-0.011 Sum_probs=88.7
Q ss_pred hHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHH
Q 007721 352 SFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHL 430 (591)
Q Consensus 352 ~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~ 430 (591)
+....+.+.....+|++++|.+.++...+..+. ...+..+|..+...|++++|+..|++++++.|++..+........
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~- 82 (198)
T 2fbn_A 4 SHHHHHHSSGRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDK- 82 (198)
T ss_dssp ------------------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHH-
T ss_pred cccccchhhhhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHH-
Confidence 344555666777777777777777776665554 556677788888888888888888888888777643221100000
Q ss_pred HHHHHhhhcccCchhhhhhhhhccccccccc-hHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCc
Q 007721 431 VKLLNHHVRSWSPADCWIKLYDRWSSVDDIG-SLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSS 509 (591)
Q Consensus 431 ~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~-al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~ 509 (591)
... -.+.+|..++......+++. |+..+++++.++|.++.+++++|.++..+|++++|+..|++|++++|+
T Consensus 83 ~~~--------~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 154 (198)
T 2fbn_A 83 KKN--------IEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPN 154 (198)
T ss_dssp HHH--------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred HHH--------HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC
Confidence 000 00122222222222222222 356666666666666666666666666666666666666666666666
Q ss_pred hHHHHHhHHHHHHHcCCHHHHH
Q 007721 510 EHERLVYEGWILYDTGHREEAL 531 (591)
Q Consensus 510 ~~~a~~~~G~~l~~~g~~eeAl 531 (591)
+.+++..+|.++..+|+.+++.
T Consensus 155 ~~~~~~~l~~~~~~~~~~~~~~ 176 (198)
T 2fbn_A 155 NLDIRNSYELCVNKLKEARKKD 176 (198)
T ss_dssp CHHHHHHHHHHHHHHHHHHC--
T ss_pred cHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666666666666555544
No 164
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.45 E-value=1.1e-13 Score=127.25 Aligned_cols=84 Identities=8% Similarity=0.040 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCH----------HHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcC----
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQI----------RAAISEIDRIIVFKLS-VDCLELRAWLFIAAD---- 399 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~----------~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g---- 399 (591)
++|+..+++|++++|+++.+|.++|.++.+++++ ++|+..|++||+++|+ .++++++|.+|..+|
T Consensus 19 eeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P 98 (158)
T 1zu2_A 19 EQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTP 98 (158)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCc
Confidence 8999999999999999999999999999999886 5999999999999996 789999999999885
Q ss_pred -------CHHHHHHHHHHHHhcCCcc
Q 007721 400 -------DYESALRDTLALLALESNY 418 (591)
Q Consensus 400 -------~~~~A~~d~~~al~l~P~~ 418 (591)
++++|+..|++|++++|++
T Consensus 99 ~~~~a~g~~~eA~~~~~kAl~l~P~~ 124 (158)
T 1zu2_A 99 DETEAKHNFDLATQFFQQAVDEQPDN 124 (158)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred chhhhhccHHHHHHHHHHHHHhCCCC
Confidence 8999999999999999986
No 165
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.45 E-value=1.7e-13 Score=121.51 Aligned_cols=95 Identities=16% Similarity=0.115 Sum_probs=83.9
Q ss_pred CHHHHHHHHhcCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-h-------HHHHHHH
Q 007721 321 TGWMYQERSLYNLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-V-------DCLELRA 392 (591)
Q Consensus 321 ~g~a~~~r~~y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~-------~~~~~r~ 392 (591)
.|..++..+.| ++|+..|++|++++|+++.+|.++|.++..+|++++|+.+|+++|+++|+ . .++..+|
T Consensus 14 lG~~~~~~~~~---~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg 90 (127)
T 4gcn_A 14 LGNAAYKQKDF---EKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAG 90 (127)
T ss_dssp HHHHHHHTTCH---HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCH---HHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHH
Confidence 45555555555 88899999999999999999999999999999999999999999999884 2 2567789
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcCCcc
Q 007721 393 WLFIAADDYESALRDTLALLALESNY 418 (591)
Q Consensus 393 ~~~~~~g~~~~A~~d~~~al~l~P~~ 418 (591)
.++..+|++++|+..|+++++++|+.
T Consensus 91 ~~~~~~~~~~~A~~~~~kal~~~~~~ 116 (127)
T 4gcn_A 91 NAFQKQNDLSLAVQWFHRSLSEFRDP 116 (127)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSCCH
T ss_pred HHHHHcCCHHHHHHHHHHHHhhCcCH
Confidence 99999999999999999999999974
No 166
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.45 E-value=2.8e-13 Score=137.17 Aligned_cols=159 Identities=11% Similarity=-0.015 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHcCCCChH------HHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-h------HHHHHHHHHHHHcCCH
Q 007721 335 REKIVDLNYASELDPTLSF------PYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-V------DCLELRAWLFIAADDY 401 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~------ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~------~~~~~r~~~~~~~g~~ 401 (591)
++|...++++++..|..+. .|..+|.++...|++++|+..|++|+.+.+. . .++.+.|.++..+|++
T Consensus 92 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~ 171 (293)
T 3u3w_A 92 KEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYL 171 (293)
T ss_dssp HHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCH
Confidence 5666666666665555443 2234566666666666666666666665332 1 1345566666666666
Q ss_pred HHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHh
Q 007721 402 ESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRF 481 (591)
Q Consensus 402 ~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~ 481 (591)
++|+..|++++++-.... ...|..+.+++
T Consensus 172 ~~A~~~~~~al~~~~~~~---------------------------------------------------~~~~~~~~~~~ 200 (293)
T 3u3w_A 172 KKGIDLFEQILKQLEALH---------------------------------------------------DNEEFDVKVRY 200 (293)
T ss_dssp HHHHHHHHHHHHHHHHSS---------------------------------------------------CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcc---------------------------------------------------cchhHHHHHHH
Confidence 666666666655433210 12234456799
Q ss_pred hhHHHHHHhCCHHHHHHHHHHHHhcCCch------HHHHHhHHHHHHHcC-CHHHHHHHHHHhhcccccH
Q 007721 482 RQSLLLLRLNCQKAAMRCLRLARNHSSSE------HERLVYEGWILYDTG-HREEALSRAEKSISIERTF 544 (591)
Q Consensus 482 ~~g~~l~~l~~~~eA~~~~~~Al~l~p~~------~~a~~~~G~~l~~~g-~~eeAl~~~e~ai~l~~~~ 544 (591)
++|.++..+|++++|+..+++|+++.+.. +.+++++|.+++.+| ++++|+..|++|+.+-...
T Consensus 201 nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~~ 270 (293)
T 3u3w_A 201 NHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDIL 270 (293)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999998766 899999999999999 5799999999999875443
No 167
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.45 E-value=6.7e-13 Score=117.27 Aligned_cols=121 Identities=14% Similarity=0.031 Sum_probs=93.0
Q ss_pred HcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhh
Q 007721 346 ELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGR 424 (591)
Q Consensus 346 ~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~ 424 (591)
..+|..+..|..+|.++...|++++|+..|+++++++|+ +..+.++|.++..+|++++|+..|+++++++|++
T Consensus 3 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~------ 76 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQS------ 76 (137)
T ss_dssp ---CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------
T ss_pred CCccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchh------
Confidence 456788888888888888888888888888888888885 6777888888888888888888777777777654
Q ss_pred chHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHH
Q 007721 425 VSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLAR 504 (591)
Q Consensus 425 ~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al 504 (591)
+.+++++|.++..+|++++|+..+++++
T Consensus 77 ----------------------------------------------------~~~~~~l~~~~~~~~~~~~A~~~~~~a~ 104 (137)
T 3q49_B 77 ----------------------------------------------------VKAHFFLGQCQLEMESYDEAIANLQRAY 104 (137)
T ss_dssp ----------------------------------------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ----------------------------------------------------HHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3467788888888888888888888888
Q ss_pred hcCCc-----hHHHHHhHHHHHHHc
Q 007721 505 NHSSS-----EHERLVYEGWILYDT 524 (591)
Q Consensus 505 ~l~p~-----~~~a~~~~G~~l~~~ 524 (591)
+++|+ +.++...++.+....
T Consensus 105 ~~~p~~~~~~~~~~~~~l~~~~~~~ 129 (137)
T 3q49_B 105 SLAKEQRLNFGDDIPSALRIAKKKR 129 (137)
T ss_dssp HHHHHTTCCCTTHHHHHHHHHHHHH
T ss_pred HHChhHHHHHHHHHHHHHHHHHHHH
Confidence 88888 555555555554433
No 168
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.44 E-value=3.8e-14 Score=147.46 Aligned_cols=142 Identities=12% Similarity=0.019 Sum_probs=78.3
Q ss_pred HcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCChH------------------HHHHHHHHHHHcCCHHHHHHH
Q 007721 346 ELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLSVD------------------CLELRAWLFIAADDYESALRD 407 (591)
Q Consensus 346 ~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~~~------------------~~~~r~~~~~~~g~~~~A~~d 407 (591)
+..|..+..|+++|.++...|++++|+..|++||++.|+.. ++.++|.++..+|++++|+.+
T Consensus 173 ~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~ 252 (338)
T 2if4_A 173 EERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGH 252 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 33455567789999999999999999999999999999643 444555555555555555555
Q ss_pred HHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHH
Q 007721 408 TLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLL 487 (591)
Q Consensus 408 ~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l 487 (591)
|+++++ ++|.++.+|+++|.++
T Consensus 253 ~~~al~----------------------------------------------------------~~p~~~~a~~~lg~a~ 274 (338)
T 2if4_A 253 CNIVLT----------------------------------------------------------EEEKNPKALFRRGKAK 274 (338)
T ss_dssp HHHHHH----------------------------------------------------------HCTTCHHHHHHHHHHH
T ss_pred HHHHHH----------------------------------------------------------hCCCCHHHHHHHHHHH
Confidence 555544 4455567899999999
Q ss_pred HHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHH-HHHcCCHHHHHHHHHHhhcccccHH
Q 007721 488 LRLNCQKAAMRCLRLARNHSSSEHERLVYEGWI-LYDTGHREEALSRAEKSISIERTFE 545 (591)
Q Consensus 488 ~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~-l~~~g~~eeAl~~~e~ai~l~~~~~ 545 (591)
..+|++++|+..|++|++++|++.+++.+++.+ ....++.+++...|.+++.+.|+..
T Consensus 275 ~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~ 333 (338)
T 2if4_A 275 AELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGG 333 (338)
T ss_dssp HTTTCHHHHHHHHHHTTC-----------------------------------------
T ss_pred HHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCC
Confidence 999999999999999999999999999999999 5566888999999999999998764
No 169
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.44 E-value=5.4e-13 Score=123.98 Aligned_cols=123 Identities=11% Similarity=0.002 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHH-HHHcCCH--HHHHHHHHH
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWL-FIAADDY--ESALRDTLA 410 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~-~~~~g~~--~~A~~d~~~ 410 (591)
++|+..|+++++.+|+++.+|..+|.++...|++++|+..|+++++++|+ +..+..+|.+ +...|++ ++|+..|++
T Consensus 27 ~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~ 106 (177)
T 2e2e_A 27 EAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDK 106 (177)
T ss_dssp CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999995 7778889988 8899998 888888777
Q ss_pred HHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHh
Q 007721 411 LLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRL 490 (591)
Q Consensus 411 al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l 490 (591)
+++++|++ +.+++++|.++..+
T Consensus 107 al~~~p~~----------------------------------------------------------~~~~~~la~~~~~~ 128 (177)
T 2e2e_A 107 ALALDSNE----------------------------------------------------------ITALMLLASDAFMQ 128 (177)
T ss_dssp HHHHCTTC----------------------------------------------------------HHHHHHHHHHHHHT
T ss_pred HHHhCCCc----------------------------------------------------------HHHHHHHHHHHHHc
Confidence 77777754 45678899999999
Q ss_pred CCHHHHHHHHHHHHhcCCchHHHHH
Q 007721 491 NCQKAAMRCLRLARNHSSSEHERLV 515 (591)
Q Consensus 491 ~~~~eA~~~~~~Al~l~p~~~~a~~ 515 (591)
|++++|+..++++++++|++.++..
T Consensus 129 g~~~~A~~~~~~al~~~p~~~~~~~ 153 (177)
T 2e2e_A 129 ANYAQAIELWQKVMDLNSPRINRTQ 153 (177)
T ss_dssp TCHHHHHHHHHHHHHTCCTTSCHHH
T ss_pred ccHHHHHHHHHHHHhhCCCCccHHH
Confidence 9999999999999999999876543
No 170
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.43 E-value=9.3e-14 Score=127.62 Aligned_cols=94 Identities=13% Similarity=0.014 Sum_probs=85.3
Q ss_pred hHHHHHHHHHcCCCCchhHhhhHHHHHHhCCH----------HHHHHHHHHHHhcCCchHHHHHhHHHHHHHcC------
Q 007721 462 SLAVINQMLINDPGKSFLRFRQSLLLLRLNCQ----------KAAMRCLRLARNHSSSEHERLVYEGWILYDTG------ 525 (591)
Q Consensus 462 al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~----------~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g------ 525 (591)
|+..++++++++|+++++|++.|.+|..++++ ++|+..|++|++++|+++++++++|.+++.+|
T Consensus 21 A~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~ 100 (158)
T 1zu2_A 21 IRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDE 100 (158)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcch
Confidence 48899999999999999999999999999886 59999999999999999999999999999985
Q ss_pred -----CHHHHHHHHHHhhcccccHHHHHHHHHHhhh
Q 007721 526 -----HREEALSRAEKSISIERTFEAFFLKAYILAD 556 (591)
Q Consensus 526 -----~~eeAl~~~e~ai~l~~~~~~~~~~~~~~~~ 556 (591)
++++|++.|+||++++|+++.| .+++.+++
T Consensus 101 ~~a~g~~~eA~~~~~kAl~l~P~~~~y-~~al~~~~ 135 (158)
T 1zu2_A 101 TEAKHNFDLATQFFQQAVDEQPDNTHY-LKSLEMTA 135 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCHHH-HHHHHHHH
T ss_pred hhhhccHHHHHHHHHHHHHhCCCCHHH-HHHHHHHH
Confidence 8999999999999999998755 44554443
No 171
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.42 E-value=3.9e-12 Score=108.97 Aligned_cols=121 Identities=14% Similarity=0.115 Sum_probs=99.9
Q ss_pred cCCCC-hHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhh
Q 007721 347 LDPTL-SFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGR 424 (591)
Q Consensus 347 LdP~~-~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~ 424 (591)
++|.. +.+|..+|.++...|++++|+..|+++++.+|+ ...+..+|.++...|++++|+..|+++++++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~------ 76 (125)
T 1na0_A 3 MDPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN------ 76 (125)
T ss_dssp ----CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------
T ss_pred CCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc------
Confidence 46766 788899999999999999999999999999885 6777888888999999999988888887777754
Q ss_pred chHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHH
Q 007721 425 VSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLAR 504 (591)
Q Consensus 425 ~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al 504 (591)
+.+++++|.++..+|++++|+..+++++
T Consensus 77 ----------------------------------------------------~~~~~~la~~~~~~~~~~~A~~~~~~~~ 104 (125)
T 1na0_A 77 ----------------------------------------------------AEAWYNLGNAYYKQGDYDEAIEYYQKAL 104 (125)
T ss_dssp ----------------------------------------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ----------------------------------------------------HHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 3456678888899999999999999999
Q ss_pred hcCCchHHHHHhHHHHHHHcC
Q 007721 505 NHSSSEHERLVYEGWILYDTG 525 (591)
Q Consensus 505 ~l~p~~~~a~~~~G~~l~~~g 525 (591)
+++|++..++.++|.++..+|
T Consensus 105 ~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 105 ELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHCTTCHHHHHHHHHHHHHHC
T ss_pred HhCCCcHHHHHHHHHHHHhcc
Confidence 999999999999998887765
No 172
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.42 E-value=1.4e-11 Score=144.75 Aligned_cols=253 Identities=9% Similarity=-0.008 Sum_probs=184.7
Q ss_pred HHHHHhhhHHhhhccHHHHHHHHHHHhhccccchhhhhHHHHHHhCChHHHHHHHHHHHHhcCC------CHHHHHHHHh
Q 007721 257 LALHQLGCVMFEREEYKDACYYFEAAADAGHIYSLAGLARAKYKVGQQYSAYKLINSIISEHKP------TGWMYQERSL 330 (591)
Q Consensus 257 ~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~------~g~a~~~r~~ 330 (591)
..|+++|.++...|++++|+.+|.+| +...++..++..+...|++++|+..+..++...++ .|.+|...+.
T Consensus 1106 ~vWsqLAKAql~~G~~kEAIdsYiKA---dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~r 1182 (1630)
T 1xi4_A 1106 AVWSQLAKAQLQKGMVKEAIDSYIKA---DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNR 1182 (1630)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHhc---CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcC
Confidence 57899999999999999999999876 56678888999999999999999999999876643 5666666643
Q ss_pred cCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCChHHHHHHHHHHHHcCCHHHHHHHHHH
Q 007721 331 YNLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLSVDCLELRAWLFIAADDYESALRDTLA 410 (591)
Q Consensus 331 y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~~~~~~~r~~~~~~~g~~~~A~~d~~~ 410 (591)
+ + ++++| + +..+...|.+.|..+..+|+|++|+..|++| ..|...+.++.++|++++|+..+++
T Consensus 1183 l---e-ele~f---I--~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA-------~ny~rLA~tLvkLge~q~AIEaarK 1246 (1630)
T 1xi4_A 1183 L---A-ELEEF---I--NGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV-------SNFGRLASTLVHLGEYQAAVDGARK 1246 (1630)
T ss_pred H---H-HHHHH---H--hCCCHHHHHHHHHHHHhcCCHHHHHHHHHhh-------hHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 3 3 35555 2 3445577888999999999999999999997 3566778899999999999999999
Q ss_pred HHhcCCcchh---hhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccc-hHHHHHHHHHcCCCCchhHhhhHHH
Q 007721 411 LLALESNYMM---FHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIG-SLAVINQMLINDPGKSFLRFRQSLL 486 (591)
Q Consensus 411 al~l~P~~~~---~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~-al~~~~~al~~~P~~~~~~~~~g~~ 486 (591)
|...++=.-. ..........+..........+..+-.+..| .+.+.++ ++..++++|.++|.+...+..+|.+
T Consensus 1247 A~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yY---e~~G~feEAI~LlE~aL~LeraH~gmftELaiL 1323 (1630)
T 1xi4_A 1247 ANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYY---QDRGYFEELITMLEAALGLERAHMGMFTELAIL 1323 (1630)
T ss_pred hCCHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHH---HHcCCHHHHHHHHHHHhccChhHhHHHHHHHHH
Confidence 9554431000 0000000000000001111112222222333 3345555 6889999999999999999888877
Q ss_pred HHH--hCCHHHHHHHHHHHHhcCC-----chHHHHHhHHHHHHHcCCHHHHH
Q 007721 487 LLR--LNCQKAAMRCLRLARNHSS-----SEHERLVYEGWILYDTGHREEAL 531 (591)
Q Consensus 487 l~~--l~~~~eA~~~~~~Al~l~p-----~~~~a~~~~G~~l~~~g~~eeAl 531 (591)
+.+ -++..|+++.|...+++.| .+++.+.....++..-|+++.|+
T Consensus 1324 yaKy~peklmEhlk~f~~rini~k~~r~~e~~~lW~elv~LY~~~~e~dnA~ 1375 (1630)
T 1xi4_A 1324 YSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAI 1375 (1630)
T ss_pred HHhCCHHHHHHHHHHHHHhcccchHhHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 776 7788899999999999988 77877777777777889999999
No 173
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.40 E-value=4.6e-12 Score=129.23 Aligned_cols=247 Identities=11% Similarity=0.011 Sum_probs=181.7
Q ss_pred hhhccHHHHHHHHHHHhhc-cccchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcCCcHHHHHHHHHHH
Q 007721 267 FEREEYKDACYYFEAAADA-GHIYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLYNLGREKIVDLNYAS 345 (591)
Q Consensus 267 ~~~g~~~eA~~~f~~Al~~-~~~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~~~~eA~~dl~~Ai 345 (591)
+-.|.|..++....+ +.. .+........|.++.+|++.... ..++...+......|.. .+|+..|++.+
T Consensus 24 fy~G~yq~~i~e~~~-~~~~~~~~~~~~~~Rs~iAlg~~~~~~--------~~~~~~~a~~~la~~~~-~~a~~~l~~l~ 93 (310)
T 3mv2_B 24 YYTGNFVQCLQEIEK-FSKVTDNTLLFYKAKTLLALGQYQSQD--------PTSKLGKVLDLYVQFLD-TKNIEELENLL 93 (310)
T ss_dssp HTTTCHHHHTHHHHT-SSCCCCHHHHHHHHHHHHHTTCCCCCC--------SSSTTHHHHHHHHHHHT-TTCCHHHHHTT
T ss_pred HHhhHHHHHHHHHHh-cCccchHHHHHHHHHHHHHcCCCccCC--------CCCHHHHHHHHHHHHhc-ccHHHHHHHHH
Confidence 446788877763321 111 22335566778899999875321 12233333333333333 33788899988
Q ss_pred HcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCC--C-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhh
Q 007721 346 ELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKL--S-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFH 422 (591)
Q Consensus 346 ~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p--~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~ 422 (591)
+..+....++..+|.++...|++++|+..+.+.|..+| + .++....+.++..+|+.+.|.+.+++..+.+|+..-
T Consensus 94 ~~~~~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~-- 171 (310)
T 3mv2_B 94 KDKQNSPYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVS-- 171 (310)
T ss_dssp TTSCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHH--
T ss_pred hcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccc--
Confidence 88777788888999999999999999999999999887 4 566666778999999999999999999999993000
Q ss_pred hhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccc-hHHHHHHHHHcCCC--CchhHhhhHHHHHHhCCHHHHHHH
Q 007721 423 GRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIG-SLAVINQMLINDPG--KSFLRFRQSLLLLRLNCQKAAMRC 499 (591)
Q Consensus 423 ~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~-al~~~~~al~~~P~--~~~~~~~~g~~l~~l~~~~eA~~~ 499 (591)
+.......+ +++|+.+...- +++. |..+|+++.+..|. .+..+++ ++.++|++++|.+.
T Consensus 172 ~~d~~l~~L------------aea~v~l~~g~---~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~ 233 (310)
T 3mv2_B 172 GDNEMILNL------------AESYIKFATNK---ETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGI 233 (310)
T ss_dssp HHHHHHHHH------------HHHHHHHHHTC---STTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHH
T ss_pred cchHHHHHH------------HHHHHHHHhCC---ccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHH
Confidence 001111111 45566665542 2333 68899999888886 4556555 89999999999999
Q ss_pred HHHHHhc----------CCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH
Q 007721 500 LRLARNH----------SSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFE 545 (591)
Q Consensus 500 ~~~Al~l----------~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~ 545 (591)
+++++++ +|++++++.|...+.+.+|+ +|-+.++|+..++|+-.
T Consensus 234 L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp 287 (310)
T 3mv2_B 234 VELLLSDYYSVEQKENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLDHEHA 287 (310)
T ss_dssp HHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCH
T ss_pred HHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCCh
Confidence 9988887 59999999999999999998 99999999999999875
No 174
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.40 E-value=4.4e-12 Score=122.46 Aligned_cols=180 Identities=13% Similarity=0.031 Sum_probs=143.4
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhh
Q 007721 369 RAAISEIDRIIVFKLSVDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWI 448 (591)
Q Consensus 369 ~eAl~~~~~al~l~p~~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~ 448 (591)
.+|+..|+++.+. -++.+++.+|.++...||+++|+..|+++++... ..+...++.+... .
T Consensus 3 ~eA~~~~~~aa~~-g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g~--------~~a~~~lg~~y~~-~--------- 63 (212)
T 3rjv_A 3 TEPGSQYQQQAEA-GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQGD--------GDALALLAQLKIR-N--------- 63 (212)
T ss_dssp -CTTHHHHHHHHT-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTC--------HHHHHHHHHHTTS-S---------
T ss_pred chHHHHHHHHHHC-CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCC--------HHHHHHHHHHHHc-C---------
Confidence 4688999999965 4688899999999999999999999999988643 2233333322221 1
Q ss_pred hhhhccccc-cccc-hHHHHHHHHHcCCCCchhHhhhHHHHHH----hCCHHHHHHHHHHHHhcCC--chHHHHHhHHHH
Q 007721 449 KLYDRWSSV-DDIG-SLAVINQMLINDPGKSFLRFRQSLLLLR----LNCQKAAMRCLRLARNHSS--SEHERLVYEGWI 520 (591)
Q Consensus 449 ~l~~~~~~~-~~~~-al~~~~~al~~~P~~~~~~~~~g~~l~~----l~~~~eA~~~~~~Al~l~p--~~~~a~~~~G~~ 520 (591)
.+ .++. |+..|.+++ +++++.+++++|.++.. .+++++|+..|++|.+..| +++++++++|.+
T Consensus 64 -------g~~~~~~~A~~~~~~A~--~~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~ 134 (212)
T 3rjv_A 64 -------PQQADYPQARQLAEKAV--EAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLI 134 (212)
T ss_dssp -------TTSCCHHHHHHHHHHHH--HTTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHH
T ss_pred -------CCCCCHHHHHHHHHHHH--HCCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHH
Confidence 00 1333 688999995 57899999999999998 8999999999999999999 579999999999
Q ss_pred HHH----cCCHHHHHHHHHHhhcccccHHHHHHHHHHhhhcCC--CCCchhHHHHHHHHHhc
Q 007721 521 LYD----TGHREEALSRAEKSISIERTFEAFFLKAYILADTNL--DPESSTYVIQLLEEALR 576 (591)
Q Consensus 521 l~~----~g~~eeAl~~~e~ai~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 576 (591)
+.. .+++++|+..|++|+++.++..|++..|..+....- -+..-..-+..++.|..
T Consensus 135 y~~g~g~~~d~~~A~~~~~~A~~~~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~ 196 (212)
T 3rjv_A 135 YASGVHGPEDDVKASEYFKGSSSLSRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCL 196 (212)
T ss_dssp HHHTSSSSCCHHHHHHHHHHHHHTSCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHH
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHH
Confidence 999 899999999999999996666799999999987643 23444566677777654
No 175
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.40 E-value=8.1e-12 Score=108.09 Aligned_cols=130 Identities=22% Similarity=0.274 Sum_probs=105.5
Q ss_pred HHHHhhhHHhhhccHHHHHHHHHHHhhcccc--chhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcCCcH
Q 007721 258 ALHQLGCVMFEREEYKDACYYFEAAADAGHI--YSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLYNLGR 335 (591)
Q Consensus 258 a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~~--~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~~~~ 335 (591)
+++.+|..+...|++++|+..|+++++..+. .++..+|.++...|++ +
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~------------------------------~ 52 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDY------------------------------D 52 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCH------------------------------H
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCH------------------------------H
Confidence 4566777777777777777777777766432 2334444444444443 6
Q ss_pred HHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 007721 336 EKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLAL 414 (591)
Q Consensus 336 eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l 414 (591)
+|+..|+++++.+|+...++.++|.++...|++++|+..++++++..|+ +..+..++.++...|++++|+..|++++++
T Consensus 53 ~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 53 EAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 132 (136)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 7777788888889999999999999999999999999999999999995 777888999999999999999999999999
Q ss_pred CCc
Q 007721 415 ESN 417 (591)
Q Consensus 415 ~P~ 417 (591)
+|+
T Consensus 133 ~~~ 135 (136)
T 2fo7_A 133 DPR 135 (136)
T ss_dssp STT
T ss_pred CCC
Confidence 996
No 176
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.39 E-value=1.1e-12 Score=115.18 Aligned_cols=85 Identities=13% Similarity=0.133 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLA 413 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~ 413 (591)
++|+..|++|++++|+++.+|+++|.++..+|++++|+..|++|++++|+ +..+..+|.++..+|++++|+..|+++++
T Consensus 34 ~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 113 (121)
T 1hxi_A 34 AEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLRAWLL 113 (121)
T ss_dssp HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999996 78889999999999999999999999999
Q ss_pred cCCcch
Q 007721 414 LESNYM 419 (591)
Q Consensus 414 l~P~~~ 419 (591)
++|++.
T Consensus 114 ~~P~~~ 119 (121)
T 1hxi_A 114 SQPQYE 119 (121)
T ss_dssp ------
T ss_pred hCcCCC
Confidence 999873
No 177
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=7.4e-12 Score=111.34 Aligned_cols=119 Identities=12% Similarity=0.034 Sum_probs=87.9
Q ss_pred HHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC----hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchh
Q 007721 345 SELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS----VDCLELRAWLFIAADDYESALRDTLALLALESNYMM 420 (591)
Q Consensus 345 i~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~----~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~ 420 (591)
...+|+.+..+..+|..+...|++++|+..|+++++++|+ ...+..+|.++..+|++++|+..|+++++++|++
T Consensus 21 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-- 98 (148)
T 2dba_A 21 ATPGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGD-- 98 (148)
T ss_dssp CCTTCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC--
T ss_pred CccchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccC--
Confidence 4456778888888888888888888888888888888886 4556667777777777777777777776666654
Q ss_pred hhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHH
Q 007721 421 FHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCL 500 (591)
Q Consensus 421 ~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~ 500 (591)
+.+++++|.++..+|++++|+..+
T Consensus 99 --------------------------------------------------------~~~~~~~a~~~~~~~~~~~A~~~~ 122 (148)
T 2dba_A 99 --------------------------------------------------------VKALYRRSQALEKLGRLDQAVLDL 122 (148)
T ss_dssp --------------------------------------------------------HHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred --------------------------------------------------------HHHHHHHHHHHHHcCCHHHHHHHH
Confidence 245666777777777777777777
Q ss_pred HHHHhcCCchHHHHHhHHHHH
Q 007721 501 RLARNHSSSEHERLVYEGWIL 521 (591)
Q Consensus 501 ~~Al~l~p~~~~a~~~~G~~l 521 (591)
+++++++|++.+++..++.+.
T Consensus 123 ~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 123 QRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHcCCCcHHHHHHHHHHH
Confidence 777777777777776666554
No 178
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.37 E-value=3.5e-12 Score=112.59 Aligned_cols=105 Identities=13% Similarity=0.124 Sum_probs=94.6
Q ss_pred cCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccc
Q 007721 381 FKL-SVDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDD 459 (591)
Q Consensus 381 l~p-~~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~ 459 (591)
.+| ++..+..+|.++...|++++|+..|+++++++|++
T Consensus 4 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~----------------------------------------- 42 (137)
T 3q49_B 4 MKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV----------------------------------------- 42 (137)
T ss_dssp --CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----------------------------------------
T ss_pred CccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCc-----------------------------------------
Confidence 345 36778889999999999999999888888877764
Q ss_pred cchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhc
Q 007721 460 IGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSIS 539 (591)
Q Consensus 460 ~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~ 539 (591)
+.+|+++|.++..+|++++|+..++++++++|+++.+++++|.+++.+|++++|+..|+++++
T Consensus 43 -----------------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 105 (137)
T 3q49_B 43 -----------------AVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYS 105 (137)
T ss_dssp -----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -----------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 457889999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc
Q 007721 540 IERT 543 (591)
Q Consensus 540 l~~~ 543 (591)
+.|+
T Consensus 106 ~~p~ 109 (137)
T 3q49_B 106 LAKE 109 (137)
T ss_dssp HHHH
T ss_pred HChh
Confidence 9987
No 179
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.36 E-value=4.8e-13 Score=145.83 Aligned_cols=138 Identities=17% Similarity=0.134 Sum_probs=108.1
Q ss_pred CCHHHHHHHHhcCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHc
Q 007721 320 PTGWMYQERSLYNLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAA 398 (591)
Q Consensus 320 ~~g~a~~~r~~y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~ 398 (591)
..|..+...+.| ++|+..|++|++++|+++.+|.++|.++.++|++++|+..|++|++++|+ +..++++|.++..+
T Consensus 11 ~lg~~~~~~g~~---~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~ 87 (477)
T 1wao_1 11 TQANDYFKAKDY---ENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMAL 87 (477)
T ss_dssp SSSSSTTTTTCH---HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCH---HHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 344444555445 89999999999999999999999999999999999999999999999996 78889999999999
Q ss_pred CCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHH--HhhhcccCchhhhhhhhhccccccccchHHHHH---------
Q 007721 399 DDYESALRDTLALLALESNYMMFHGRVSGDHLVKLL--NHHVRSWSPADCWIKLYDRWSSVDDIGSLAVIN--------- 467 (591)
Q Consensus 399 g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l--~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~--------- 467 (591)
|++++|+..|+++++++|++.. +...++.+ ....+++++| +..++
T Consensus 88 g~~~eA~~~~~~al~~~p~~~~------~~~~l~~~~~~~~~g~~~~A------------------~~~~~~~~~~~~~~ 143 (477)
T 1wao_1 88 GKFRAALRDYETVVKVKPHDKD------AKMKYQECNKIVKQKAFERA------------------IAGDEHKRSVVDSL 143 (477)
T ss_dssp TCHHHHHHHHHHHHHHSTTCTT------HHHHHHHHHHHHHHHHHCCC------------------------CCSTTTCC
T ss_pred CCHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHHHHHHHHHH------------------hccccccchhHhhh
Confidence 9999999999999999998843 22233333 2333555555 33444
Q ss_pred --HHHHcCCCCchhHhhhH
Q 007721 468 --QMLINDPGKSFLRFRQS 484 (591)
Q Consensus 468 --~al~~~P~~~~~~~~~g 484 (591)
++++++|.....++..+
T Consensus 144 ~~~al~~~~~~~~~~~~~~ 162 (477)
T 1wao_1 144 DIESMTIEDEYSGPKLEDG 162 (477)
T ss_dssp TTSSCCCCTTCCSCCCGGG
T ss_pred hhhhccccccccccccccc
Confidence 78888888888777665
No 180
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.36 E-value=3.9e-12 Score=119.73 Aligned_cols=168 Identities=11% Similarity=-0.055 Sum_probs=130.4
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhc------CCC-hHHHHHHHHHHHHcCCHHHHHHH
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVF------KLS-VDCLELRAWLFIAADDYESALRD 407 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l------~p~-~~~~~~r~~~~~~~g~~~~A~~d 407 (591)
++|...++....-.+..+.++.++|.++...|++++|+..+++++++ .|. ...+.++|.++..+|++++|+..
T Consensus 9 ~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~ 88 (203)
T 3gw4_A 9 ALAERQAQALLAHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRC 88 (203)
T ss_dssp HHHHHHHHHHHTSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 77777544444433377889999999999999999999999999984 222 45567789999999999999999
Q ss_pred HHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCC-CCchhHhhhHHH
Q 007721 408 TLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDP-GKSFLRFRQSLL 486 (591)
Q Consensus 408 ~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P-~~~~~~~~~g~~ 486 (591)
|++++++.+.. ++ +| ..+.+++++|.+
T Consensus 89 ~~~al~~~~~~---------------------------------------~~-------------~~~~~~~~~~~lg~~ 116 (203)
T 3gw4_A 89 FLEERELLASL---------------------------------------PE-------------DPLAASANAYEVATV 116 (203)
T ss_dssp HHHHHHHHHHS---------------------------------------CC-------------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc---------------------------------------Cc-------------cHHHHHHHHHHHHHH
Confidence 99998877643 00 01 124568899999
Q ss_pred HHHhCCHHHHHHHHHHHHhcCCch------HHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHHHHHHHHHHh
Q 007721 487 LLRLNCQKAAMRCLRLARNHSSSE------HERLVYEGWILYDTGHREEALSRAEKSISIERTFEAFFLKAYIL 554 (591)
Q Consensus 487 l~~l~~~~eA~~~~~~Al~l~p~~------~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~~~~~~~~~~ 554 (591)
+..+|++++|++.+++|+++.+.. +.++.++|.++..+|++++|+..+++|+++-+....-+..+.++
T Consensus 117 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 190 (203)
T 3gw4_A 117 ALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELEDSEAVNELM 190 (203)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 999999999999999999775432 44568999999999999999999999999866655333444433
No 181
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.35 E-value=4e-12 Score=133.98 Aligned_cols=124 Identities=11% Similarity=0.081 Sum_probs=110.1
Q ss_pred hHHHHhHHHHHHHhCCHHHHHHHHHHHHh----------------cCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 007721 352 SFPYKYRAVAKMEEGQIRAAISEIDRIIV----------------FKLS-VDCLELRAWLFIAADDYESALRDTLALLAL 414 (591)
Q Consensus 352 ~~ay~~rg~~l~~l~~~~eAl~~~~~al~----------------l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l 414 (591)
+..|..+|.++...|++++|+..|++||+ ++|. ...+.++|.++..+|++++|+.+|++|+++
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 45689999999999999999999999998 6664 677788999999999999998888888887
Q ss_pred CCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHH
Q 007721 415 ESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQK 494 (591)
Q Consensus 415 ~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~ 494 (591)
+|++ +.+|+++|.++..+|+++
T Consensus 303 ~p~~----------------------------------------------------------~~a~~~lg~~~~~~g~~~ 324 (370)
T 1ihg_A 303 DPSN----------------------------------------------------------TKALYRRAQGWQGLKEYD 324 (370)
T ss_dssp CTTC----------------------------------------------------------HHHHHHHHHHHHHTTCHH
T ss_pred Cchh----------------------------------------------------------HHHHHHHHHHHHHccCHH
Confidence 7764 467889999999999999
Q ss_pred HHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHH
Q 007721 495 AAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSR 533 (591)
Q Consensus 495 eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~ 533 (591)
+|+..|++|++++|++.+++..++.++..+|+++++...
T Consensus 325 eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 325 QALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998888653
No 182
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.35 E-value=1.6e-11 Score=104.10 Aligned_cols=111 Identities=16% Similarity=0.092 Sum_probs=70.8
Q ss_pred hHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHH
Q 007721 352 SFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHL 430 (591)
Q Consensus 352 ~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~ 430 (591)
+.+|..+|.++...|++++|+..|++++..+|+ +..+..+|.++..+|++++|+..++++++++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~------------ 71 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDW------------ 71 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC------------
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCccc------------
Confidence 455666666777777777777777777766663 5555666666666666666666665555555543
Q ss_pred HHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCch
Q 007721 431 VKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSE 510 (591)
Q Consensus 431 ~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~ 510 (591)
+.+++++|.++..+|++++|+..++++++++|++
T Consensus 72 ----------------------------------------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 105 (118)
T 1elw_A 72 ----------------------------------------------GKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANN 105 (118)
T ss_dssp ----------------------------------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC
T ss_pred ----------------------------------------------HHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCC
Confidence 2345566666666666666666666666666666
Q ss_pred HHHHHhHHHH
Q 007721 511 HERLVYEGWI 520 (591)
Q Consensus 511 ~~a~~~~G~~ 520 (591)
+.++..+|.+
T Consensus 106 ~~~~~~l~~~ 115 (118)
T 1elw_A 106 PQLKEGLQNM 115 (118)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 6666665554
No 183
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.34 E-value=1.5e-11 Score=111.66 Aligned_cols=133 Identities=18% Similarity=0.198 Sum_probs=108.4
Q ss_pred HHHHHHHhhhHHhhhccHHHHHHHHHHHhhcccc--chhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcC
Q 007721 255 RMLALHQLGCVMFEREEYKDACYYFEAAADAGHI--YSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLYN 332 (591)
Q Consensus 255 ~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~~--~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~ 332 (591)
....++.+|..+...|++++|+..|++++...+. .++..+|.++...|++
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~---------------------------- 63 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECY---------------------------- 63 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCH----------------------------
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCH----------------------------
Confidence 4566788888888888888888888888887543 3455566666666554
Q ss_pred CcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHH--HHHHHHHcCCHHHHHHHHH
Q 007721 333 LGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLEL--RAWLFIAADDYESALRDTL 409 (591)
Q Consensus 333 ~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~--r~~~~~~~g~~~~A~~d~~ 409 (591)
++|+..|+++++++|+++.+|.++|.++..+|++++|+..|+++++++|+ ...+.. ++..+...|++++|+..+.
T Consensus 64 --~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 141 (166)
T 1a17_A 64 --GYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDE 141 (166)
T ss_dssp --HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 67777888899999999999999999999999999999999999999996 565543 5556889999999999999
Q ss_pred HHHhcCCc
Q 007721 410 ALLALESN 417 (591)
Q Consensus 410 ~al~l~P~ 417 (591)
++.++-+.
T Consensus 142 ~~~~~~~~ 149 (166)
T 1a17_A 142 HKRSVVDS 149 (166)
T ss_dssp HHHHHHHH
T ss_pred chHHHhcc
Confidence 98876654
No 184
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.34 E-value=5.2e-12 Score=106.37 Aligned_cols=71 Identities=11% Similarity=0.156 Sum_probs=46.6
Q ss_pred cCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Q 007721 347 LDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESN 417 (591)
Q Consensus 347 LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~ 417 (591)
++|+++.+|..+|.++...|++++|+..|+++++++|+ ...+..+|.++..+|++++|+..|+++++++|+
T Consensus 1 l~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 1 MVDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp CCCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred CCCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 46777777777777777777777777777777777664 455555666666666666666665555555554
No 185
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.34 E-value=8.9e-12 Score=108.52 Aligned_cols=113 Identities=9% Similarity=-0.008 Sum_probs=99.8
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHH
Q 007721 385 VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLA 464 (591)
Q Consensus 385 ~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~ 464 (591)
...+..+|.++...|++++|+..|+++++++|++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~---------------------------------------------- 49 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKD---------------------------------------------- 49 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTC----------------------------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc----------------------------------------------
Confidence 5667778888888888888888888887777754
Q ss_pred HHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccH
Q 007721 465 VINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTF 544 (591)
Q Consensus 465 ~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~ 544 (591)
+.+++++|.++..+|++++|+..++++++++|+++.+++++|.+++.+|++++|+..|++++.++|+.
T Consensus 50 ------------~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~ 117 (133)
T 2lni_A 50 ------------AKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSC 117 (133)
T ss_dssp ------------HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGG
T ss_pred ------------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCc
Confidence 45688899999999999999999999999999999999999999999999999999999999999987
Q ss_pred H-HHHHHHHHhh
Q 007721 545 E-AFFLKAYILA 555 (591)
Q Consensus 545 ~-~~~~~~~~~~ 555 (591)
. +++..|.++.
T Consensus 118 ~~~~~~l~~~~~ 129 (133)
T 2lni_A 118 KEAADGYQRCMM 129 (133)
T ss_dssp THHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 5 7777776654
No 186
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.34 E-value=1.6e-12 Score=112.84 Aligned_cols=100 Identities=14% Similarity=0.125 Sum_probs=91.4
Q ss_pred hHHHHHHHHHc---CCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhh
Q 007721 462 SLAVINQMLIN---DPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSI 538 (591)
Q Consensus 462 al~~~~~al~~---~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai 538 (591)
|+..|+++|++ +|.++.+++++|.++..+|++++|+..+++|++++|+++++++++|.+++.+|++++|+..+++++
T Consensus 9 A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 88 (117)
T 3k9i_A 9 AVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVELLLKII 88 (117)
T ss_dssp CHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 58999999999 799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccHH--HHHHHHHHhhhcCCCC
Q 007721 539 SIERTFE--AFFLKAYILADTNLDP 561 (591)
Q Consensus 539 ~l~~~~~--~~~~~~~~~~~~~~~~ 561 (591)
++.|+.. ..+.+++......+|.
T Consensus 89 ~~~p~~~~~~~~~~ai~~~~~~l~~ 113 (117)
T 3k9i_A 89 AETSDDETIQSYKQAILFYADKLDE 113 (117)
T ss_dssp HHHCCCHHHHHTHHHHHHHTTCTTC
T ss_pred HhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 9998876 4566776666555554
No 187
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.33 E-value=1.7e-11 Score=106.92 Aligned_cols=119 Identities=10% Similarity=-0.043 Sum_probs=80.4
Q ss_pred HHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-h---HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHh
Q 007721 353 FPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-V---DCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGD 428 (591)
Q Consensus 353 ~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~---~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~ 428 (591)
.+++++|.++...|++++|+..|+++++.+|+ + ..++.+|.++..+|++++|+..|+++++++|++.
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~--------- 73 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHD--------- 73 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTST---------
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCc---------
Confidence 45667777777777777777777777777774 3 4566677777777777777777777777777541
Q ss_pred HHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCC
Q 007721 429 HLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSS 508 (591)
Q Consensus 429 ~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p 508 (591)
..+.+++++|.++..+|++++|+..++++++..|
T Consensus 74 ----------------------------------------------~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p 107 (129)
T 2xev_A 74 ----------------------------------------------KAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYP 107 (129)
T ss_dssp ----------------------------------------------THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred ----------------------------------------------ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCC
Confidence 1134566677777777777777777777777777
Q ss_pred chHHHHHhHHHHHHHcCC
Q 007721 509 SEHERLVYEGWILYDTGH 526 (591)
Q Consensus 509 ~~~~a~~~~G~~l~~~g~ 526 (591)
++..+...+..+-.-.++
T Consensus 108 ~~~~~~~a~~~l~~l~~~ 125 (129)
T 2xev_A 108 GSDAARVAQERLQSIRLG 125 (129)
T ss_dssp TSHHHHHHHHHHHHHC--
T ss_pred CChHHHHHHHHHHHHHhh
Confidence 777666665555444443
No 188
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.33 E-value=1.1e-12 Score=124.65 Aligned_cols=129 Identities=16% Similarity=0.124 Sum_probs=78.2
Q ss_pred HHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-h----------------HHHHHHHHHHHHcCCHHHHHHH
Q 007721 345 SELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-V----------------DCLELRAWLFIAADDYESALRD 407 (591)
Q Consensus 345 i~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~----------------~~~~~r~~~~~~~g~~~~A~~d 407 (591)
..-.|..+..+..+|.++...|++++|+..|++++++.|+ + ..+.++|.++..+|++++|+..
T Consensus 31 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~ 110 (198)
T 2fbn_A 31 DEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDH 110 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 3333444556666666776677777777777777766663 3 4555666666667777777777
Q ss_pred HHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHH
Q 007721 408 TLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLL 487 (591)
Q Consensus 408 ~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l 487 (591)
|+++++++|++. .+...++.+....+++++| +..+.++++++|.++.++.+++.++
T Consensus 111 ~~~al~~~p~~~------~~~~~lg~~~~~~~~~~~A------------------~~~~~~al~~~p~~~~~~~~l~~~~ 166 (198)
T 2fbn_A 111 ASKVLKIDKNNV------KALYKLGVANMYFGFLEEA------------------KENLYKAASLNPNNLDIRNSYELCV 166 (198)
T ss_dssp HHHHHHHSTTCH------HHHHHHHHHHHHHTCHHHH------------------HHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHhCcccH------HHHHHHHHHHHHcccHHHH------------------HHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 777777766652 2333333333333344433 5666677777777777777777777
Q ss_pred HHhCCHHHHH
Q 007721 488 LRLNCQKAAM 497 (591)
Q Consensus 488 ~~l~~~~eA~ 497 (591)
..+++.+++.
T Consensus 167 ~~~~~~~~~~ 176 (198)
T 2fbn_A 167 NKLKEARKKD 176 (198)
T ss_dssp HHHHHHHC--
T ss_pred HHHHHHHHHH
Confidence 7777666555
No 189
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.32 E-value=5.2e-12 Score=113.05 Aligned_cols=140 Identities=14% Similarity=0.068 Sum_probs=119.0
Q ss_pred hHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCCh-------HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhh
Q 007721 352 SFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLSV-------DCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGR 424 (591)
Q Consensus 352 ~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~~-------~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~ 424 (591)
+.++.++|.++...|++++|+..+++++++.+.. ..+..+|.++..+|++++|+..|++++++.|+..
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~----- 83 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK----- 83 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-----
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC-----
Confidence 5688999999999999999999999999986631 2567789999999999999999999999887531
Q ss_pred chHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHH
Q 007721 425 VSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLAR 504 (591)
Q Consensus 425 ~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al 504 (591)
+. +..+.+++++|.++..+|++++|+..+++++
T Consensus 84 ----------------------------------~~-------------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~ 116 (164)
T 3ro3_A 84 ----------------------------------DR-------------AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHL 116 (164)
T ss_dssp ----------------------------------CH-------------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ----------------------------------Cc-------------HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 00 1113567889999999999999999999999
Q ss_pred hcCC------chHHHHHhHHHHHHHcCCHHHHHHHHHHhhccccc
Q 007721 505 NHSS------SEHERLVYEGWILYDTGHREEALSRAEKSISIERT 543 (591)
Q Consensus 505 ~l~p------~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~ 543 (591)
++.+ ..+.++.++|.+++.+|++++|+..+++++++.++
T Consensus 117 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 117 AIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 8843 34778999999999999999999999999988654
No 190
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.32 E-value=1.2e-12 Score=113.66 Aligned_cols=109 Identities=17% Similarity=0.121 Sum_probs=75.7
Q ss_pred HhCCHHHHHHHHHHHHhc---CCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhc
Q 007721 364 EEGQIRAAISEIDRIIVF---KLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVR 439 (591)
Q Consensus 364 ~l~~~~eAl~~~~~al~l---~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~ 439 (591)
.+|++++|+..|+++|++ +|+ +..+.++|.++..+|++++|+..|+++++++|++
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~--------------------- 60 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH--------------------- 60 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------------
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc---------------------
Confidence 356777777777777777 454 5566677777777777777777776666666654
Q ss_pred ccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHH
Q 007721 440 SWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGW 519 (591)
Q Consensus 440 ~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~ 519 (591)
+.+++++|.++..+|++++|+..+++++++.|++++...+.+-
T Consensus 61 -------------------------------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~a 103 (117)
T 3k9i_A 61 -------------------------------------QALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQA 103 (117)
T ss_dssp -------------------------------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHHH
T ss_pred -------------------------------------hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 4566778888888888888888888888888888877776666
Q ss_pred HHHHcCCHHHH
Q 007721 520 ILYDTGHREEA 530 (591)
Q Consensus 520 ~l~~~g~~eeA 530 (591)
+.+..+.+++.
T Consensus 104 i~~~~~~l~~~ 114 (117)
T 3k9i_A 104 ILFYADKLDET 114 (117)
T ss_dssp HHHHTTCTTCC
T ss_pred HHHHHHHHHHH
Confidence 66666655543
No 191
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.31 E-value=1.6e-11 Score=105.94 Aligned_cols=114 Identities=11% Similarity=0.017 Sum_probs=99.7
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHH
Q 007721 385 VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLA 464 (591)
Q Consensus 385 ~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~ 464 (591)
...+..+|..+...|++++|+..|+++++++|++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------------------------------------- 45 (131)
T 2vyi_A 12 AERLKTEGNEQMKVENFEAAVHFYGKAIELNPAN---------------------------------------------- 45 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----------------------------------------------
T ss_pred hHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCC----------------------------------------------
Confidence 4566778888888888888888887777777654
Q ss_pred HHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccH
Q 007721 465 VINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTF 544 (591)
Q Consensus 465 ~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~ 544 (591)
+.+++++|.++..+|++++|+..++++++++|+++.+++.+|.+++.+|++++|+..|++++++.|+.
T Consensus 46 ------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 113 (131)
T 2vyi_A 46 ------------AVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDN 113 (131)
T ss_dssp ------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred ------------HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccc
Confidence 45678899999999999999999999999999999999999999999999999999999999999976
Q ss_pred H-HHHHHHHHhhh
Q 007721 545 E-AFFLKAYILAD 556 (591)
Q Consensus 545 ~-~~~~~~~~~~~ 556 (591)
. +++..|.++..
T Consensus 114 ~~~~~~l~~~~~~ 126 (131)
T 2vyi_A 114 ETYKSNLKIAELK 126 (131)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 5 88887776653
No 192
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.31 E-value=1.2e-12 Score=139.18 Aligned_cols=233 Identities=10% Similarity=0.029 Sum_probs=76.9
Q ss_pred HHHHHhhhHHhhhccHHHHHHHHHHHhhccccchhhhhHHHHHHhCChHHHHHHHHHHHHh------cCCCHHHHHHHHh
Q 007721 257 LALHQLGCVMFEREEYKDACYYFEAAADAGHIYSLAGLARAKYKVGQQYSAYKLINSIISE------HKPTGWMYQERSL 330 (591)
Q Consensus 257 ~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~~~a~~~la~~~~~~G~~~~A~~~~~~aI~~------~~~~g~a~~~r~~ 330 (591)
..|.++|.++...|++++|++.|.++ +....+..++......|++++|+..+..+++. .+.++.+|...|.
T Consensus 33 ~vWs~La~A~l~~g~~~eAIdsfika---~D~~~y~~V~~~ae~~g~~EeAi~yl~~ark~~~~~~i~~~Li~~Y~Klg~ 109 (449)
T 1b89_A 33 AVWSQLAKAQLQKGMVKEAIDSYIKA---DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNR 109 (449)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHcC---CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCccchhHHHHHHHHHHhCC
Confidence 46778888888888888888888653 33335666677777778887777766666643 2334445544433
Q ss_pred cCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCChHHHHHHHHHHHHcCCHHHHHHHHHH
Q 007721 331 YNLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLSVDCLELRAWLFIAADDYESALRDTLA 410 (591)
Q Consensus 331 y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~~~~~~~r~~~~~~~g~~~~A~~d~~~ 410 (591)
+ .++..-++ .|+ ..+|.++|..+.+.|++++|+..|+++ ..|..++.++..+|+|++|+..|++
T Consensus 110 l---~e~e~f~~-----~pn-~~a~~~IGd~~~~~g~yeeA~~~Y~~a-------~n~~~LA~~L~~Lg~yq~AVea~~K 173 (449)
T 1b89_A 110 L---AELEEFIN-----GPN-NAHIQQVGDRCYDEKMYDAAKLLYNNV-------SNFGRLASTLVHLGEYQAAVDGARK 173 (449)
T ss_dssp H---HHHTTTTT-----CC-----------------CTTTHHHHHHHT-------TCHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred H---HHHHHHHc-----CCc-HHHHHHHHHHHHHcCCHHHHHHHHHHh-------hhHHHHHHHHHHhccHHHHHHHHHH
Confidence 3 44333332 243 347777777777777777777777766 2455667777777777777777777
Q ss_pred HHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccc-hHHHHHHHHHcCCCCchhHhhhHHHHHH
Q 007721 411 LLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIG-SLAVINQMLINDPGKSFLRFRQSLLLLR 489 (591)
Q Consensus 411 al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~-al~~~~~al~~~P~~~~~~~~~g~~l~~ 489 (591)
+. +| ..|.++....-..++++ |..+..+ |..+|.. .......+.+
T Consensus 174 A~--~~----------------------------~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~---l~~lv~~Yek 219 (449)
T 1b89_A 174 AN--ST----------------------------RTWKEVCFACVDGKEFRLAQMCGLH-IVVHADE---LEELINYYQD 219 (449)
T ss_dssp HT--CH----------------------------HHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHH---HHHHHHHHHH
T ss_pred cC--Cc----------------------------hhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhh---HHHHHHHHHH
Confidence 71 22 12223323222233333 2222221 2233332 2245555566
Q ss_pred hCCHHHHHHHHHHHHhcCCchHHHHHhHHHHH--HHcCCHHHHHHHHHHhhcccc
Q 007721 490 LNCQKAAMRCLRLARNHSSSEHERLVYEGWIL--YDTGHREEALSRAEKSISIER 542 (591)
Q Consensus 490 l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l--~~~g~~eeAl~~~e~ai~l~~ 542 (591)
.|++++|+..+++++.++|.+..++..+|.++ |+.|+..|++..|...|.|.|
T Consensus 220 ~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k 274 (449)
T 1b89_A 220 RGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPK 274 (449)
T ss_dssp TTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHH
T ss_pred CCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcH
Confidence 66666666666666666655555555555443 344556666666655555543
No 193
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.30 E-value=2e-11 Score=106.44 Aligned_cols=104 Identities=14% Similarity=0.034 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHH
Q 007721 387 CLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVI 466 (591)
Q Consensus 387 ~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~ 466 (591)
.++.+|..+...|++++|+..|+++++.+|++.
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~----------------------------------------------- 36 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGV----------------------------------------------- 36 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSST-----------------------------------------------
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCc-----------------------------------------------
Confidence 457788899999999999999999998888751
Q ss_pred HHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCch---HHHHHhHHHHHHHcCCHHHHHHHHHHhhccccc
Q 007721 467 NQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSE---HERLVYEGWILYDTGHREEALSRAEKSISIERT 543 (591)
Q Consensus 467 ~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~---~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~ 543 (591)
..+.+++++|.++..+|++++|+..|+++++..|++ +++++++|.+++.+|++++|+..|++++++.|+
T Consensus 37 --------~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~ 108 (129)
T 2xev_A 37 --------YTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPG 108 (129)
T ss_dssp --------THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred --------ccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC
Confidence 113678899999999999999999999999999999 999999999999999999999999999999998
Q ss_pred HH
Q 007721 544 FE 545 (591)
Q Consensus 544 ~~ 545 (591)
..
T Consensus 109 ~~ 110 (129)
T 2xev_A 109 SD 110 (129)
T ss_dssp SH
T ss_pred Ch
Confidence 76
No 194
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.30 E-value=9.4e-13 Score=140.10 Aligned_cols=269 Identities=9% Similarity=0.049 Sum_probs=147.1
Q ss_pred HHHHHHHhhhhccccchhHHHHHHHHhhcchhhhHHHHHHHHhhhHHhhhccHHHHHHHHHHHhhc-cccchhhhhHHHH
Q 007721 220 LYYFLSQVAMEKDRVSNTTVMLLERLGECSTERWQRMLALHQLGCVMFEREEYKDACYYFEAAADA-GHIYSLAGLARAK 298 (591)
Q Consensus 220 ~~a~Ls~v~~d~~~r~~~~v~lLe~~~~~~~~~~~~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~-~~~~a~~~la~~~ 298 (591)
.+..++........ .+.++..+.+ + + ...++...+......|++++|+.+++.+.+. +++.....++..+
T Consensus 34 vWs~La~A~l~~g~-~~eAIdsfik---a-~----D~~~y~~V~~~ae~~g~~EeAi~yl~~ark~~~~~~i~~~Li~~Y 104 (449)
T 1b89_A 34 VWSQLAKAQLQKGM-VKEAIDSYIK---A-D----DPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFAL 104 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHcCC-HHHHHHHHHc---C-C----CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCccchhHHHHHHHH
Confidence 34555555554433 4455555533 2 1 2347788898999999999999999888775 2334455667778
Q ss_pred HHhCChHHHHHHHHHH-HHhcCCCHHHHHHHHhcCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHH
Q 007721 299 YKVGQQYSAYKLINSI-ISEHKPTGWMYQERSLYNLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDR 377 (591)
Q Consensus 299 ~~~G~~~~A~~~~~~a-I~~~~~~g~a~~~r~~y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~ 377 (591)
.++|++.++...+... .......|..+..+|.| ++|...|+++ ..|..+|.++.++|++++|++.|.+
T Consensus 105 ~Klg~l~e~e~f~~~pn~~a~~~IGd~~~~~g~y---eeA~~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~K 173 (449)
T 1b89_A 105 AKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMY---DAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARK 173 (449)
T ss_dssp ----CHHHHTTTTTCC----------------CT---TTHHHHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHcCCcHHHHHHHHHHHHHcCCH---HHHHHHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHH
Confidence 8899988776655421 01112345555555555 9999999988 5899999999999999999999999
Q ss_pred HHhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccc
Q 007721 378 IIVFKLSVDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSV 457 (591)
Q Consensus 378 al~l~p~~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~ 457 (591)
| .++..|.....++...|+++.|...... +...|++.. ....+....++|++|
T Consensus 174 A----~~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~l~---------~lv~~Yek~G~~eEa------------- 226 (449)
T 1b89_A 174 A----NSTRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADELE---------ELINYYQDRGYFEEL------------- 226 (449)
T ss_dssp H----TCHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHHHH---------HHHHHHHHTTCHHHH-------------
T ss_pred c----CCchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhhHH---------HHHHHHHHCCCHHHH-------------
Confidence 9 3678888888899999999999887775 447776521 122223333444444
Q ss_pred cccchHHHHHHHHHcCCCCchhHhhhHHHHHH--hCCHHHHHHHHHHHHhcCC-----chHHHHHhHHHHHHHcCCHHHH
Q 007721 458 DDIGSLAVINQMLINDPGKSFLRFRQSLLLLR--LNCQKAAMRCLRLARNHSS-----SEHERLVYEGWILYDTGHREEA 530 (591)
Q Consensus 458 ~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~--l~~~~eA~~~~~~Al~l~p-----~~~~a~~~~G~~l~~~g~~eeA 530 (591)
+..++++|.++|.+...+..+|.++.+ .++..|+++.|...+++.| .++..+-.+..++..-|+||.|
T Consensus 227 -----i~lLe~aL~le~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k~~~~~~~~~~w~e~~~ly~~~~e~d~A 301 (449)
T 1b89_A 227 -----ITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNA 301 (449)
T ss_dssp -----HHHHHHHTTSTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHHHHHHHHTTTCHHHHHHHHHHTTCHHHH
T ss_pred -----HHHHHHHhCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhhchHHHH
Confidence 889999999999999999999999887 7888899999999999999 8999999999999999999999
Q ss_pred HHHHHHhhcc
Q 007721 531 LSRAEKSISI 540 (591)
Q Consensus 531 l~~~e~ai~l 540 (591)
+...-+...-
T Consensus 302 ~~tm~~h~~~ 311 (449)
T 1b89_A 302 IITMMNHPTD 311 (449)
T ss_dssp HHHHHHSTTT
T ss_pred HHHHHhCChh
Confidence 9776666544
No 195
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.29 E-value=1.9e-11 Score=103.65 Aligned_cols=107 Identities=14% Similarity=-0.042 Sum_probs=92.7
Q ss_pred hhhhhhccccccccc-hHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcC
Q 007721 447 WIKLYDRWSSVDDIG-SLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTG 525 (591)
Q Consensus 447 ~~~l~~~~~~~~~~~-al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g 525 (591)
|..++..+...+++. |+..+++++..+|.++.+++++|.++..+|++++|+..++++++++|+++.+++++|.++..+|
T Consensus 7 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 86 (118)
T 1elw_A 7 LKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLN 86 (118)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHh
Confidence 334444444444555 6889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhhcccccHH-HHHHHHHH
Q 007721 526 HREEALSRAEKSISIERTFE-AFFLKAYI 553 (591)
Q Consensus 526 ~~eeAl~~~e~ai~l~~~~~-~~~~~~~~ 553 (591)
++++|+..|++++++.|+.. +++..+.+
T Consensus 87 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 115 (118)
T 1elw_A 87 RFEEAKRTYEEGLKHEANNPQLKEGLQNM 115 (118)
T ss_dssp CHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCCCHHHHHHHHHh
Confidence 99999999999999999877 55555443
No 196
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.28 E-value=9.2e-12 Score=105.30 Aligned_cols=81 Identities=32% Similarity=0.445 Sum_probs=65.4
Q ss_pred eEEEE-cCeEEEhhHHHHhhcCHHHHHhhcC--CCCCCCCceeEecCCCCCHHHHHHHHHHHh-----c---CCCCC--C
Q 007721 57 VTFCV-RDKEISFVRNKIASLSSPFKAMLYG--GFVESKRKTIDFSHDGVSVEGLRAVEVYTR-----T---SRVDL--F 123 (591)
Q Consensus 57 V~f~v-~g~~~~aHr~iLaa~S~yF~amf~~--~~~Es~~~~I~l~~~~vs~~~~~~ll~ylY-----t---g~~~~--~ 123 (591)
|+++. +|++|++||.+ |..|+||++||++ ++.|+....|.| ++|++.+++.+++|+| + +.++. +
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l--~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i 80 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNF--REIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPI 80 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEEC--TTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceEC--CCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcC
Confidence 55554 78999999999 9999999999987 788988899999 9999999999999999 5 44442 7
Q ss_pred ChhHHHHHHHHHhhhCh
Q 007721 124 CPGIVLELLSFANRFCC 140 (591)
Q Consensus 124 ~~~~v~~lL~~A~~~~i 140 (591)
+.+++++|+.+||++++
T Consensus 81 ~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 81 APEIALELLMAANFLDC 97 (97)
T ss_dssp CGGGHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHhhhCC
Confidence 89999999999999874
No 197
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.27 E-value=6e-11 Score=101.46 Aligned_cols=113 Identities=14% Similarity=0.110 Sum_probs=99.1
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHH
Q 007721 385 VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLA 464 (591)
Q Consensus 385 ~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~ 464 (591)
...++..|.++...|++++|+..|+++++++|++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------------------------------------- 42 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---------------------------------------------- 42 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC----------------------------------------------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc----------------------------------------------
Confidence 4567778888888999998888888877777654
Q ss_pred HHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccH
Q 007721 465 VINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTF 544 (591)
Q Consensus 465 ~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~ 544 (591)
+.+++++|.++...|++++|+..+++++++.|+++.++.++|.+++.+|++++|+..+++++.+.|+.
T Consensus 43 ------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 110 (125)
T 1na0_A 43 ------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN 110 (125)
T ss_dssp ------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred ------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 35678889999999999999999999999999999999999999999999999999999999999987
Q ss_pred H-HHHHHHHHhh
Q 007721 545 E-AFFLKAYILA 555 (591)
Q Consensus 545 ~-~~~~~~~~~~ 555 (591)
. +++..|.++.
T Consensus 111 ~~~~~~l~~~~~ 122 (125)
T 1na0_A 111 AEAKQNLGNAKQ 122 (125)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 7 7777776654
No 198
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.27 E-value=2.4e-11 Score=105.06 Aligned_cols=125 Identities=9% Similarity=-0.027 Sum_probs=104.9
Q ss_pred CCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchH
Q 007721 349 PTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSG 427 (591)
Q Consensus 349 P~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~ 427 (591)
|+.+..|..+|.++...|++++|+..|+++++++|+ +..+..+|.++..+|++++|+..|+++++++|++..
T Consensus 1 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~------- 73 (131)
T 1elr_A 1 GKQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENRE------- 73 (131)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTT-------
T ss_pred ChHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccch-------
Confidence 345678999999999999999999999999999995 788889999999999999999999999999986410
Q ss_pred hHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcC
Q 007721 428 DHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHS 507 (591)
Q Consensus 428 ~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~ 507 (591)
+ .+..+.+++++|.++..+|++++|+..+++++++.
T Consensus 74 -------------------------------~-------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 109 (131)
T 1elr_A 74 -------------------------------D-------------YRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEH 109 (131)
T ss_dssp -------------------------------C-------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred -------------------------------h-------------HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 0 00114567889999999999999999999999999
Q ss_pred CchHHHHHhHHHHHHHcC
Q 007721 508 SSEHERLVYEGWILYDTG 525 (591)
Q Consensus 508 p~~~~a~~~~G~~l~~~g 525 (591)
| +.+....++.+.-.++
T Consensus 110 ~-~~~~~~~l~~~~~~~~ 126 (131)
T 1elr_A 110 R-TPDVLKKCQQAEKILK 126 (131)
T ss_dssp C-CHHHHHHHHHHHHHHH
T ss_pred C-CHHHHHHHHHHHHHHH
Confidence 9 5778888877765544
No 199
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=3.2e-11 Score=107.15 Aligned_cols=116 Identities=17% Similarity=0.119 Sum_probs=101.6
Q ss_pred CCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhcccccccc
Q 007721 382 KLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDI 460 (591)
Q Consensus 382 ~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~ 460 (591)
+|. ...+..+|..+...|++++|+..|+++++++|++.
T Consensus 24 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~----------------------------------------- 62 (148)
T 2dba_A 24 GASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQ----------------------------------------- 62 (148)
T ss_dssp TCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHH-----------------------------------------
T ss_pred chHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccch-----------------------------------------
Confidence 453 67788899999999999999999999999999741
Q ss_pred chHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcc
Q 007721 461 GSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISI 540 (591)
Q Consensus 461 ~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l 540 (591)
..+.+++++|.++..+|++++|+..++++++++|+++.+++++|.+++.+|++++|+..|++++++
T Consensus 63 --------------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 63 --------------DQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp --------------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred --------------HHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 014678899999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHH-HHHHHHH
Q 007721 541 ERTFE-AFFLKAY 552 (591)
Q Consensus 541 ~~~~~-~~~~~~~ 552 (591)
+|+.. +....+-
T Consensus 129 ~p~~~~~~~~l~~ 141 (148)
T 2dba_A 129 EPKNKVFQEALRN 141 (148)
T ss_dssp CSSCHHHHHHHHH
T ss_pred CCCcHHHHHHHHH
Confidence 99876 4444433
No 200
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.25 E-value=2.7e-11 Score=101.90 Aligned_cols=98 Identities=13% Similarity=0.071 Sum_probs=82.0
Q ss_pred hhhhhhccccccccc-hHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCc--hHHHHHhHHHHHHH
Q 007721 447 WIKLYDRWSSVDDIG-SLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSS--EHERLVYEGWILYD 523 (591)
Q Consensus 447 ~~~l~~~~~~~~~~~-al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~--~~~a~~~~G~~l~~ 523 (591)
|..++......+++. |+..++++++++|.++.+++++|.++..+|++++|+..++++++++|+ +.++++++|.++..
T Consensus 9 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~ 88 (112)
T 2kck_A 9 YYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRY 88 (112)
T ss_dssp GGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHH
Confidence 334444433444444 588899999999999999999999999999999999999999999999 99999999999999
Q ss_pred c-CCHHHHHHHHHHhhcccccH
Q 007721 524 T-GHREEALSRAEKSISIERTF 544 (591)
Q Consensus 524 ~-g~~eeAl~~~e~ai~l~~~~ 544 (591)
+ |++++|++.+++++...|+.
T Consensus 89 ~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 89 IEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp CSSCSHHHHHHHHHHGGGCCCC
T ss_pred HhCCHHHHHHHHHHHhhcccCC
Confidence 9 99999999999999988863
No 201
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=99.25 E-value=1.6e-10 Score=120.02 Aligned_cols=156 Identities=10% Similarity=0.024 Sum_probs=106.9
Q ss_pred HHHHHHHHHcCC---HHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHH
Q 007721 389 ELRAWLFIAADD---YESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAV 465 (591)
Q Consensus 389 ~~r~~~~~~~g~---~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~ 465 (591)
+.||.-+...++ +.+|+..|++|++++|+|..++...+..+. +....+.+... -...+.. ++.
T Consensus 200 ~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~---~~~~~~~~~~~-~~~~l~~---------a~~- 265 (372)
T 3ly7_A 200 FYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDI---VRHSQHPLDEK-QLAALNT---------EID- 265 (372)
T ss_dssp HHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH---HHHHHSCCCHH-HHHHHHH---------HHH-
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH---HHhccCCCchh-hHHHHHH---------HHH-
Confidence 456665554433 467778888888888877654333222221 11111111111 0000000 011
Q ss_pred HHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH
Q 007721 466 INQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFE 545 (591)
Q Consensus 466 ~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~ 545 (591)
--.++..+|.++.+|.-.|..+...|++++|++.+++|++++|+ +.++..+|+++...|++++|++.|++|+.++|+.+
T Consensus 266 a~~a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 266 NIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp HHHTCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred HHHhcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 11345788999999999999999999999999999999999986 77899999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCC
Q 007721 546 AFFLKAYILADTNL 559 (591)
Q Consensus 546 ~~~~~~~~~~~~~~ 559 (591)
.|++-.-..=.|+|
T Consensus 345 t~~~~~~l~F~sn~ 358 (372)
T 3ly7_A 345 TLYWIENGIFQTSV 358 (372)
T ss_dssp HHHHHHHSSSCCCH
T ss_pred hHHHHhCceeecch
Confidence 87765444434443
No 202
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.23 E-value=1.4e-11 Score=128.02 Aligned_cols=154 Identities=14% Similarity=-0.010 Sum_probs=88.8
Q ss_pred HHHHHHHhhhHHhhhccHHHHHHHHHHHhhccccchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcCCc
Q 007721 255 RMLALHQLGCVMFEREEYKDACYYFEAAADAGHIYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLYNLG 334 (591)
Q Consensus 255 ~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~~~ 334 (591)
....++++|..++..|+|++|+..|++|+.+.+.... +...|++.++...+.. ..+-+.|.+|...+.|
T Consensus 178 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~------~~~~~~~~~~~~~l~~--~~~~nla~~~~~~g~~--- 246 (338)
T 2if4_A 178 AADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFM------FQLYGKYQDMALAVKN--PCHLNIAACLIKLKRY--- 246 (338)
T ss_dssp HHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHH------HTCCHHHHHHHHHHHT--HHHHHHHHHHHTTTCC---
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchh------hhhcccHHHHHHHHHH--HHHHHHHHHHHHcCCH---
Confidence 3566889999999999999999999999998654321 1223333333332211 1233456666666666
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHH-HHHcCCHHHHHHHHHHHH
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWL-FIAADDYESALRDTLALL 412 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~-~~~~g~~~~A~~d~~~al 412 (591)
++|+..|++|++++|+++.+|+++|.++..+|++++|+..|+++++++|+ ...+..++.+ ....+..++|...|++++
T Consensus 247 ~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l 326 (338)
T 2if4_A 247 DEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIF 326 (338)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC----------------------------------
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999996 6666667765 566778899999999999
Q ss_pred hcCCcch
Q 007721 413 ALESNYM 419 (591)
Q Consensus 413 ~l~P~~~ 419 (591)
.++|++.
T Consensus 327 ~~~p~~~ 333 (338)
T 2if4_A 327 KGKDEGG 333 (338)
T ss_dssp -------
T ss_pred CCCCCCC
Confidence 9999874
No 203
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.22 E-value=2e-11 Score=128.56 Aligned_cols=127 Identities=13% Similarity=-0.008 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHH
Q 007721 386 DCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAV 465 (591)
Q Consensus 386 ~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~ 465 (591)
..+..+|..+...|++++|+..|++|+++.|... . ...
T Consensus 224 ~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~------------------------~------------------~~~ 261 (370)
T 1ihg_A 224 EDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSR------------------------A------------------AAE 261 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH------------------------H------------------HSC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCc------------------------c------------------ccC
Confidence 3467789999999999999999999999988641 0 011
Q ss_pred HHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH
Q 007721 466 INQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFE 545 (591)
Q Consensus 466 ~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~ 545 (591)
.++...++|.++.+|+++|.++.++|++++|+..+++|++++|+++.+++++|.+++.+|++++|+..|++|++++|+..
T Consensus 262 ~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~ 341 (370)
T 1ihg_A 262 DADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDK 341 (370)
T ss_dssp HHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 45667788999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred -HHHHHHHHh
Q 007721 546 -AFFLKAYIL 554 (591)
Q Consensus 546 -~~~~~~~~~ 554 (591)
+....+.++
T Consensus 342 ~~~~~l~~~~ 351 (370)
T 1ihg_A 342 AIQAELLKVK 351 (370)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 555555444
No 204
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.22 E-value=2.2e-10 Score=115.75 Aligned_cols=156 Identities=10% Similarity=0.065 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHH
Q 007721 386 DCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAV 465 (591)
Q Consensus 386 ~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~ 465 (591)
..+...+..+...|++++|+..++++++..|...............+.+.....++++ |+..
T Consensus 76 ~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------A~~~ 137 (293)
T 2qfc_A 76 KQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEY------------------CILE 137 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHH------------------HHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHH------------------HHHH
Confidence 3445677889999999999999999999988643222222222333333233333333 4889
Q ss_pred HHHHHHcCCCC------chhHhhhHHHHHHhCCHHHHHHHHHHHH---hcCCch----HHHHHhHHHHHHHcCCHHHHHH
Q 007721 466 INQMLINDPGK------SFLRFRQSLLLLRLNCQKAAMRCLRLAR---NHSSSE----HERLVYEGWILYDTGHREEALS 532 (591)
Q Consensus 466 ~~~al~~~P~~------~~~~~~~g~~l~~l~~~~eA~~~~~~Al---~l~p~~----~~a~~~~G~~l~~~g~~eeAl~ 532 (591)
++++++..+.. +.+++++|.++..+|++++|+..|++|+ +..|++ +.+++++|++++.+|++++|+.
T Consensus 138 ~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~ 217 (293)
T 2qfc_A 138 LKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLY 217 (293)
T ss_dssp HHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHH
Confidence 99999877655 5689999999999999999999999999 556663 3699999999999999999999
Q ss_pred HHHHhhccccc-------HHHHHHHHHHhhhcCC
Q 007721 533 RAEKSISIERT-------FEAFFLKAYILADTNL 559 (591)
Q Consensus 533 ~~e~ai~l~~~-------~~~~~~~~~~~~~~~~ 559 (591)
.|++|+++.++ -.+|+++|.++...+-
T Consensus 218 ~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~ 251 (293)
T 2qfc_A 218 QVNKAIEISCRINSMALIGQLYYQRGECLRKLEY 251 (293)
T ss_dssp HHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCC
Confidence 99999999876 5689999998877653
No 205
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.19 E-value=5.4e-11 Score=102.38 Aligned_cols=84 Identities=19% Similarity=0.170 Sum_probs=81.1
Q ss_pred hHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhccc
Q 007721 462 SLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIE 541 (591)
Q Consensus 462 al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~ 541 (591)
++..++++++.+|.++.+++++|.++..+|++++|+..+++|++++|+++++++++|.++..+|++++|+..|++++++.
T Consensus 4 a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 83 (115)
T 2kat_A 4 ITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAA 83 (115)
T ss_dssp HHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHH
Q 007721 542 RTFE 545 (591)
Q Consensus 542 ~~~~ 545 (591)
|+..
T Consensus 84 ~~~~ 87 (115)
T 2kat_A 84 QSRG 87 (115)
T ss_dssp HHHT
T ss_pred cccc
Confidence 8654
No 206
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.18 E-value=1.8e-10 Score=116.39 Aligned_cols=156 Identities=13% Similarity=0.000 Sum_probs=121.5
Q ss_pred HHHHHHhCChHHHHHHHHHHHHhcCCCHH------HHHHHHhc--C--CcHHHHHHHHHHHHcCCCChH------HHHhH
Q 007721 295 ARAKYKVGQQYSAYKLINSIISEHKPTGW------MYQERSLY--N--LGREKIVDLNYASELDPTLSF------PYKYR 358 (591)
Q Consensus 295 a~~~~~~G~~~~A~~~~~~aI~~~~~~g~------a~~~r~~y--~--~~~eA~~dl~~Ai~LdP~~~~------ay~~r 358 (591)
...++..|++++|...+.+++...+..+. .+...+.+ . ..++|+..|++|+++.+.... +|.++
T Consensus 82 i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~l 161 (293)
T 3u3w_A 82 VIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAI 161 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHH
Confidence 44578899999999999999987665433 12223322 2 238999999999998666544 79999
Q ss_pred HHHHHHhCCHHHHHHHHHHHHhcC----CC----hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHH
Q 007721 359 AVAKMEEGQIRAAISEIDRIIVFK----LS----VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHL 430 (591)
Q Consensus 359 g~~l~~l~~~~eAl~~~~~al~l~----p~----~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~ 430 (591)
|.++..+|++++|+..|++|+++- .+ ...+++.|.++..+|++++|
T Consensus 162 g~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A-------------------------- 215 (293)
T 3u3w_A 162 ANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEES-------------------------- 215 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHH--------------------------
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHH--------------------------
Confidence 999999999999999999999531 12 34567888888888887764
Q ss_pred HHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCC------chhHhhhHHHHHHhCC-HHHHHHHHHHH
Q 007721 431 VKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGK------SFLRFRQSLLLLRLNC-QKAAMRCLRLA 503 (591)
Q Consensus 431 ~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~------~~~~~~~g~~l~~l~~-~~eA~~~~~~A 503 (591)
+..+++++++.+.. +.+++++|.++.++|+ +++|+..|++|
T Consensus 216 --------------------------------~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~A 263 (293)
T 3u3w_A 216 --------------------------------LYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKA 263 (293)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred --------------------------------HHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHH
Confidence 55677777766544 7899999999999995 59999999999
Q ss_pred HhcCC
Q 007721 504 RNHSS 508 (591)
Q Consensus 504 l~l~p 508 (591)
+.+..
T Consensus 264 l~i~~ 268 (293)
T 3u3w_A 264 SFFFD 268 (293)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98753
No 207
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.18 E-value=1e-10 Score=109.91 Aligned_cols=169 Identities=8% Similarity=-0.113 Sum_probs=117.0
Q ss_pred HHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHh----cCCcHHHHHHHHHHHH------cCCCChHHHHhHHHHHHHhCC
Q 007721 298 KYKVGQQYSAYKLINSIISEHKPTGWMYQERSL----YNLGREKIVDLNYASE------LDPTLSFPYKYRAVAKMEEGQ 367 (591)
Q Consensus 298 ~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~----y~~~~eA~~dl~~Ai~------LdP~~~~ay~~rg~~l~~l~~ 367 (591)
.+..|++.+|...+.......+..+.++...+. .+..++|+..|+++++ ..|..+.++.++|.++..+|+
T Consensus 2 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 81 (203)
T 3gw4_A 2 AFEAHDYALAERQAQALLAHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGN 81 (203)
T ss_dssp -----CHHHHHHHHHHHHTSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC
T ss_pred ccccccHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCC
Confidence 356789999888444333322245555555543 1333899999999999 677788999999999999999
Q ss_pred HHHHHHHHHHHHhc---CC-C----hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhc
Q 007721 368 IRAAISEIDRIIVF---KL-S----VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVR 439 (591)
Q Consensus 368 ~~eAl~~~~~al~l---~p-~----~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~ 439 (591)
+++|+..+++++++ .+ + ...+.++|.++..+|++++|
T Consensus 82 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A----------------------------------- 126 (203)
T 3gw4_A 82 WDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGA----------------------------------- 126 (203)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHH-----------------------------------
T ss_pred HHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHH-----------------------------------
Confidence 99999999999998 33 2 23456678888888887765
Q ss_pred ccCchhhhhhhhhccccccccchHHHHHHHHHcCCC------CchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHH
Q 007721 440 SWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPG------KSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHER 513 (591)
Q Consensus 440 ~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~------~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a 513 (591)
+..+++++++.+. .+.++.++|.++..+|++++|++.+++|+++.....+.
T Consensus 127 -----------------------~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 183 (203)
T 3gw4_A 127 -----------------------RQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELEDS 183 (203)
T ss_dssp -----------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred -----------------------HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCH
Confidence 2233444433211 13346899999999999999999999999987665443
Q ss_pred HHhHHHHHHHcC
Q 007721 514 LVYEGWILYDTG 525 (591)
Q Consensus 514 ~~~~G~~l~~~g 525 (591)
+..+.++..++
T Consensus 184 -~~~~~~~~~~~ 194 (203)
T 3gw4_A 184 -EAVNELMTRLN 194 (203)
T ss_dssp -HHHHHHHHHHH
T ss_pred -HHHHHHHhccc
Confidence 34455554443
No 208
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.17 E-value=8e-11 Score=101.72 Aligned_cols=109 Identities=12% Similarity=-0.014 Sum_probs=93.7
Q ss_pred hhhhhhhhccccccccc-hHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCch-------HHHHHh
Q 007721 445 DCWIKLYDRWSSVDDIG-SLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSE-------HERLVY 516 (591)
Q Consensus 445 ~~~~~l~~~~~~~~~~~-al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~-------~~a~~~ 516 (591)
..|..++......+++. |+..+.+++..+|.++.+++++|.++..+|++++|+..+++++++.|++ +.++++
T Consensus 5 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (131)
T 1elr_A 5 LKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYAR 84 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHH
Confidence 34444444444445555 6889999999999999999999999999999999999999999999988 999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHhhcccccHHHHHHHHHH
Q 007721 517 EGWILYDTGHREEALSRAEKSISIERTFEAFFLKAYI 553 (591)
Q Consensus 517 ~G~~l~~~g~~eeAl~~~e~ai~l~~~~~~~~~~~~~ 553 (591)
+|.+++.+|++++|+..|++++++.|+.......+.+
T Consensus 85 la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~l~~~ 121 (131)
T 1elr_A 85 IGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQQA 121 (131)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 9999999999999999999999999987665554443
No 209
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.17 E-value=6.7e-11 Score=107.05 Aligned_cols=99 Identities=14% Similarity=0.106 Sum_probs=86.3
Q ss_pred eEEEE-cCeEEEhhHHHHhhcCHHHHHhhcCCCCCCCCceeEecCCCCCHHHHHHHHHHHhcCC----------------
Q 007721 57 VTFCV-RDKEISFVRNKIASLSSPFKAMLYGGFVESKRKTIDFSHDGVSVEGLRAVEVYTRTSR---------------- 119 (591)
Q Consensus 57 V~f~v-~g~~~~aHr~iLaa~S~yF~amf~~~~~Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~---------------- 119 (591)
|+++. +|+.|.+||.+ |..|.+|+.||.+.- .+.|.| ++|+..+++.+++|+|+.+
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~----~~~Ipl--~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~ 76 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG----MDPVPL--PNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 76 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC----CSSEEC--TTCCHHHHHHHHHHHHHHTTCC-------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC----CCceec--CCcCHHHHHHHHHHHHHhccCCCccccccccccch
Confidence 77776 78999999998 899999999998631 457999 9999999999999999866
Q ss_pred ----------CCCCChhHHHHHHHHHhhhChHHHHHHHHHHHHhhcCCHHhHHHH
Q 007721 120 ----------VDLFCPGIVLELLSFANRFCCEEMKSACDAHLASLVGDIEDALIL 164 (591)
Q Consensus 120 ----------~~~~~~~~v~~lL~~A~~~~i~~L~~~C~~~L~~~i~~~~n~~~l 164 (591)
+. ++.+++.+|+.+||+++|..|.+.|+++++..+. ..+.-+|
T Consensus 77 ~~i~~wD~~F~~-vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ik-gkt~eei 129 (141)
T 1fs1_B 77 DDIPVWDQEFLK-VDQGTLFELILAANYLDIKGLLDVTCKTVANMIK-GKTPEEI 129 (141)
T ss_dssp ----HHHHHHTC-SCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT-TCCHHHH
T ss_pred hhhhHHHHHHHh-CCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHc-CCCHHHH
Confidence 55 8899999999999999999999999999999997 3544443
No 210
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.16 E-value=1.3e-10 Score=100.02 Aligned_cols=84 Identities=12% Similarity=-0.035 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLA 413 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~ 413 (591)
++|+..|+++++++|+++.+|+++|.++...|++++|+..|+++++++|+ ...++.+|.++..+|++++|+..|+++++
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 81 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLA 81 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 36788999999999999999999999999999999999999999999996 78889999999999999999999999999
Q ss_pred cCCcc
Q 007721 414 LESNY 418 (591)
Q Consensus 414 l~P~~ 418 (591)
++|+.
T Consensus 82 ~~~~~ 86 (115)
T 2kat_A 82 AAQSR 86 (115)
T ss_dssp HHHHH
T ss_pred hcccc
Confidence 99975
No 211
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.12 E-value=8e-10 Score=116.89 Aligned_cols=195 Identities=14% Similarity=0.052 Sum_probs=145.6
Q ss_pred HHHHHhcCCcHHHHHHHHHHHHcCCCChH-----------------HHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hH
Q 007721 325 YQERSLYNLGREKIVDLNYASELDPTLSF-----------------PYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VD 386 (591)
Q Consensus 325 ~~~r~~y~~~~eA~~dl~~Ai~LdP~~~~-----------------ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~ 386 (591)
+...+.| .+|+..|.++++.+|+... ++.++|.+|..+|++++|++.|.+++.+.+. ..
T Consensus 14 l~~~~~y---~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~ 90 (434)
T 4b4t_Q 14 LVNEKQY---NEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAK 90 (434)
T ss_dssp HHHHTCH---HHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCH
T ss_pred HHHCCCH---HHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccc
Confidence 3444445 8999999999999998754 5788999999999999999999999988664 22
Q ss_pred H------HHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhcccccccc
Q 007721 387 C------LELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDI 460 (591)
Q Consensus 387 ~------~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~ 460 (591)
. ..+.+.++...|++++|+..+++++...+....-.++..+...++.+....+++++
T Consensus 91 ~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~----------------- 153 (434)
T 4b4t_Q 91 SKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKD----------------- 153 (434)
T ss_dssp HHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHH-----------------
T ss_pred hHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHH-----------------
Confidence 1 23456778888999999999999999888763333333344444444444444443
Q ss_pred chHHHHHHHHHc------CCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCch-------HHHHHhHHHHHHHcCCH
Q 007721 461 GSLAVINQMLIN------DPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSE-------HERLVYEGWILYDTGHR 527 (591)
Q Consensus 461 ~al~~~~~al~~------~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~-------~~a~~~~G~~l~~~g~~ 527 (591)
|+..+.+++.. .|..++++.++|.++..+|++++|...+++|+...|.. +..+...|.++...|++
T Consensus 154 -A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y 232 (434)
T 4b4t_Q 154 -SLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDY 232 (434)
T ss_dssp -HHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSCH
T ss_pred -HHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHhH
Confidence 48888888876 45556789999999999999999999999998875432 45567778888888999
Q ss_pred HHHHHHHHHhhcc
Q 007721 528 EEALSRAEKSISI 540 (591)
Q Consensus 528 eeAl~~~e~ai~l 540 (591)
++|...|.+++..
T Consensus 233 ~~A~~~~~~a~~~ 245 (434)
T 4b4t_Q 233 KTAFSYFFESFES 245 (434)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999888764
No 212
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.11 E-value=3e-10 Score=120.22 Aligned_cols=214 Identities=13% Similarity=0.021 Sum_probs=158.4
Q ss_pred HhhhHHhhhccHHHHHHHHHHHhhcccc--chhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcCCcHHHH
Q 007721 261 QLGCVMFEREEYKDACYYFEAAADAGHI--YSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLYNLGREKI 338 (591)
Q Consensus 261 ~lG~~~~~~g~~~eA~~~f~~Al~~~~~--~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~~~~eA~ 338 (591)
..+......|+|++|++.|.++++..+. ......+......+..+.|+ ...|.+|...+.+ ++|+
T Consensus 9 ~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al----------~~l~~~y~~~~~~---~~a~ 75 (434)
T 4b4t_Q 9 EEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSI----------LELGQLYVTMGAK---DKLR 75 (434)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHH----------HHHHHHHHHHTCH---HHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHH----------HHHHHHHHHCCCH---HHHH
Confidence 4566778889999999999999988443 22222222222222223232 2357888888777 9999
Q ss_pred HHHHHHHHcCCCChHH------HHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-------hHHHHHHHHHHHHcCCHHHHH
Q 007721 339 VDLNYASELDPTLSFP------YKYRAVAKMEEGQIRAAISEIDRIIVFKLS-------VDCLELRAWLFIAADDYESAL 405 (591)
Q Consensus 339 ~dl~~Ai~LdP~~~~a------y~~rg~~l~~l~~~~eAl~~~~~al~l~p~-------~~~~~~r~~~~~~~g~~~~A~ 405 (591)
..+.+++.+.+....+ +..+|.++...|++++|+..+++++...+. ...+..+|.++...|+|++|+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 155 (434)
T 4b4t_Q 76 EFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSL 155 (434)
T ss_dssp HHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHH
Confidence 9999999998887654 456788888899999999999999987441 345667899999999999999
Q ss_pred HHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCC-------ch
Q 007721 406 RDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGK-------SF 478 (591)
Q Consensus 406 ~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~-------~~ 478 (591)
..+++++..-.....-.....+....+.+....+++++| ...+++++.+.|.. +.
T Consensus 156 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A------------------~~~~~~al~~~~~~~~~~~~~~~ 217 (434)
T 4b4t_Q 156 ALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKS------------------KASLTAARTAANSIYCPTQTVAE 217 (434)
T ss_dssp HHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHH------------------HHHHHHHHHHHHHSCCCHHHHHH
T ss_pred HHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHH------------------HHHHHHHHHHhhcCCCchHHHHH
Confidence 999999999887754444445666666666666665555 88999999876543 34
Q ss_pred hHhhhHHHHHHhCCHHHHHHHHHHHHh
Q 007721 479 LRFRQSLLLLRLNCQKAAMRCLRLARN 505 (591)
Q Consensus 479 ~~~~~g~~l~~l~~~~eA~~~~~~Al~ 505 (591)
.+...|.++...|++++|...|.++++
T Consensus 218 ~~~~~g~~~~~~~~y~~A~~~~~~a~~ 244 (434)
T 4b4t_Q 218 LDLMSGILHCEDKDYKTAFSYFFESFE 244 (434)
T ss_dssp HHHHHHHHTTSSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 566777777778999999999998875
No 213
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.11 E-value=1.1e-10 Score=98.51 Aligned_cols=74 Identities=14% Similarity=0.162 Sum_probs=68.6
Q ss_pred cCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH
Q 007721 472 NDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFE 545 (591)
Q Consensus 472 ~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~ 545 (591)
.+|+++.+++++|.++..+|++++|+..+++|++++|+++.+++++|.++..+|++++|+..|++++++.|...
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~ 75 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEG 75 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHS
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999977653
No 214
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.09 E-value=5.1e-11 Score=100.76 Aligned_cols=54 Identities=9% Similarity=0.019 Sum_probs=24.6
Q ss_pred HhhhHHHHHHhCCHHHHHHHHHHHHhcCCch------HHHHHhHHHHHHHcCCHHHHHHH
Q 007721 480 RFRQSLLLLRLNCQKAAMRCLRLARNHSSSE------HERLVYEGWILYDTGHREEALSR 533 (591)
Q Consensus 480 ~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~------~~a~~~~G~~l~~~g~~eeAl~~ 533 (591)
++++|.++..+|++++|+..+++|++++|++ +.+++.+|.++..+|++++|+..
T Consensus 41 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 100 (111)
T 2l6j_A 41 YSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLELAQGAVGSVQIPVVE 100 (111)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHHHHHHHHCCCCCSSS
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHhHhhhHhH
Confidence 3444444444444444444444444444444 44444444444444444444433
No 215
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.06 E-value=3.2e-10 Score=95.63 Aligned_cols=72 Identities=13% Similarity=0.100 Sum_probs=66.7
Q ss_pred cCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcc
Q 007721 347 LDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNY 418 (591)
Q Consensus 347 LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~ 418 (591)
.+|+++.+|+++|.++..+|++++|+..|+++++++|+ +..++++|.++..+|++++|+..|+++++++|+.
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 48999999999999999999999999999999999996 7889999999999999999999999999999875
No 216
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=99.06 E-value=3.3e-11 Score=111.44 Aligned_cols=109 Identities=13% Similarity=0.112 Sum_probs=62.4
Q ss_pred eEEEE-cCeEEEhhHHHHhhcCHHHHHhhcCCCCCCCCceeEecCCCCCHHHHHHHHHHHhcCC----------------
Q 007721 57 VTFCV-RDKEISFVRNKIASLSSPFKAMLYGGFVESKRKTIDFSHDGVSVEGLRAVEVYTRTSR---------------- 119 (591)
Q Consensus 57 V~f~v-~g~~~~aHr~iLaa~S~yF~amf~~~~~Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~---------------- 119 (591)
|+++. +|+.|.+||.+ |..|.+|+.||.++.. .+.|.| ++|+..+++.|++|+|+..
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~~---~~~Ipl--~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~ 79 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDCV---DNGVPL--PNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATS 79 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC---------------CC--TTSCHHHHHHHHHC---------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccCC---CCceeC--CcCcHHHHHHHHHHHHHcccCCCcccccccccccc
Confidence 77775 79999999998 8999999999987642 347899 9999999999999999976
Q ss_pred -----------CCCCChhHHHHHHHHHhhhChHHHHHHHHHHHHhhcCC--HHhHHHHHHHHHHhC
Q 007721 120 -----------VDLFCPGIVLELLSFANRFCCEEMKSACDAHLASLVGD--IEDALILIDYGLEER 172 (591)
Q Consensus 120 -----------~~~~~~~~v~~lL~~A~~~~i~~L~~~C~~~L~~~i~~--~~n~~~ll~~A~~~~ 172 (591)
+. ++.+++.+|+.+||+++|..|.+.|+++++..|.. ++++..++.+...+.
T Consensus 80 ~~~i~~wD~~Fl~-vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t 144 (160)
T 2p1m_A 80 DDDLKAWDADFMK-IDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFT 144 (160)
T ss_dssp ----------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCC
T ss_pred cchhhHHHHHHHc-CCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCC
Confidence 23 77889999999999999999999999999999941 666666666544443
No 217
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.06 E-value=1.2e-09 Score=97.36 Aligned_cols=139 Identities=11% Similarity=-0.015 Sum_probs=109.5
Q ss_pred HHHHHHHhhhHHhhhccHHHHHHHHHHHhhcccc--------chhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHH
Q 007721 255 RMLALHQLGCVMFEREEYKDACYYFEAAADAGHI--------YSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQ 326 (591)
Q Consensus 255 ~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~~--------~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~ 326 (591)
...++..+|.++...|++++|+..|++++++.+. .++..+|.++...|++++|...+.+++...+..+.
T Consensus 8 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~--- 84 (164)
T 3ro3_A 8 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKD--- 84 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC---
Confidence 4567889999999999999999999999987321 35667788888888887777777777655422110
Q ss_pred HHHhcCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCC---C----hHHHHHHHHHHHHcC
Q 007721 327 ERSLYNLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKL---S----VDCLELRAWLFIAAD 399 (591)
Q Consensus 327 ~r~~y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p---~----~~~~~~r~~~~~~~g 399 (591)
.+..+.++.++|.++..+|++++|+..+++++++.+ + ...+..+|.++..+|
T Consensus 85 ---------------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g 143 (164)
T 3ro3_A 85 ---------------------RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALG 143 (164)
T ss_dssp ---------------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred ---------------------cHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHcc
Confidence 011256788999999999999999999999998843 1 244667889999999
Q ss_pred CHHHHHHHHHHHHhcCCc
Q 007721 400 DYESALRDTLALLALESN 417 (591)
Q Consensus 400 ~~~~A~~d~~~al~l~P~ 417 (591)
++++|+..+++++++...
T Consensus 144 ~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 144 NHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp CHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999999998764
No 218
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.03 E-value=7.9e-10 Score=93.30 Aligned_cols=83 Identities=10% Similarity=0.071 Sum_probs=76.3
Q ss_pred CchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccH-------HHHH
Q 007721 476 KSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTF-------EAFF 548 (591)
Q Consensus 476 ~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~-------~~~~ 548 (591)
++..++++|.++..+|++++|+..|++|++++|+++.+++++|.+++.+|++++|+..|+++++++|++ .+++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999999999995 4888
Q ss_pred HHHHHhhhcC
Q 007721 549 LKAYILADTN 558 (591)
Q Consensus 549 ~~~~~~~~~~ 558 (591)
.+|.++....
T Consensus 83 ~~~~~~~~~~ 92 (111)
T 2l6j_A 83 RLELAQGAVG 92 (111)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8887765543
No 219
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.02 E-value=7.5e-10 Score=89.99 Aligned_cols=83 Identities=12% Similarity=0.063 Sum_probs=76.8
Q ss_pred CCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH-HHHHHHH
Q 007721 474 PGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFE-AFFLKAY 552 (591)
Q Consensus 474 P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~-~~~~~~~ 552 (591)
|.++.+++++|.++..+|++++|+..+++|++++|+++.+++++|.+++.+|++++|+..|+++++++|+.. +++..|.
T Consensus 6 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 85 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 85 (91)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 356789999999999999999999999999999999999999999999999999999999999999999876 8888887
Q ss_pred Hhhh
Q 007721 553 ILAD 556 (591)
Q Consensus 553 ~~~~ 556 (591)
++..
T Consensus 86 ~~~~ 89 (91)
T 1na3_A 86 AKQK 89 (91)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7643
No 220
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.91 E-value=1.9e-09 Score=89.62 Aligned_cols=57 Identities=9% Similarity=-0.059 Sum_probs=35.6
Q ss_pred hHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhccccc
Q 007721 479 LRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERT 543 (591)
Q Consensus 479 ~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~ 543 (591)
+++++|.++..+|++++|+..|++|++++|++.+++.+ +.+++++..|++++.++|+
T Consensus 37 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~~~~~a~~~~~~~~~~~p~ 93 (99)
T 2kc7_A 37 AYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------KMVMDILNFYNKDMYNQLE 93 (99)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------HHHHHHHHHHCCTTHHHHC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------HHHHHHHHHHHHHhccCcc
Confidence 55666666666666666666666666666666665543 5566666666666666554
No 221
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.90 E-value=1e-08 Score=83.12 Aligned_cols=48 Identities=10% Similarity=-0.022 Sum_probs=33.3
Q ss_pred hhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcC
Q 007721 478 FLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTG 525 (591)
Q Consensus 478 ~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g 525 (591)
.+++++|.++..+|++++|+..++++++++|+++.++.++|.++..+|
T Consensus 44 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 44 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcC
Confidence 345666777777777777777777777777777777777777766554
No 222
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.85 E-value=1.5e-09 Score=93.07 Aligned_cols=92 Identities=11% Similarity=0.018 Sum_probs=75.0
Q ss_pred HhhcCCHHhHHHHHHHHHHhChHHHHHHHHHHHHhhhHhhhCCccccccccCchhhhhHh-hhcchhHHHHHHHHHhhhh
Q 007721 152 ASLVGDIEDALILIDYGLEERATLLVASCLQVLLRELPSSLYNPKVMKIFCSSEATERLA-NVGHASFLLYYFLSQVAME 230 (591)
Q Consensus 152 ~~~i~~~~n~~~ll~~A~~~~~~~L~~~c~~~i~~n~~~v~~~~~f~~l~~~~~~~~~~~-~~~~~~~~~~a~Ls~v~~d 230 (591)
.+.++ ++||+.++.+|..|+++.|.+.|.+||.+||.++.++++|++|-. ....+.+. -+..+..++.+++.|+.++
T Consensus 5 ~~~L~-~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~-~~L~~lL~sdv~~E~~vf~av~~Wv~~d 82 (105)
T 2eqx_A 5 SSGVQ-VGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPH-RLLTDIISDGVPCSQNPTEAIEAWINFN 82 (105)
T ss_dssp CCCCC-TTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCH-HHHHHHHHTCEETTSCHHHHHHHHHHTT
T ss_pred hccCC-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCH-HHHHHHHcCCCCCHHHHHHHHHHHHHcC
Confidence 34677 899999999999999999999999999999999999999998622 11111111 1566777999999999999
Q ss_pred ccccchhHHHHHHHH
Q 007721 231 KDRVSNTTVMLLERL 245 (591)
Q Consensus 231 ~~~r~~~~v~lLe~~ 245 (591)
...|..+...+++..
T Consensus 83 ~~~R~~~~~~Ll~~V 97 (105)
T 2eqx_A 83 KEEREAFAESLRTSL 97 (105)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888888888774
No 223
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.82 E-value=7.6e-08 Score=96.23 Aligned_cols=82 Identities=7% Similarity=0.008 Sum_probs=76.6
Q ss_pred hHHHHHHHHHcCCC--CchhHhhhHHHHHHh-----CCHHHHHHHHHHHHhcCCch-HHHHHhHHHHHHHc-CCHHHHHH
Q 007721 462 SLAVINQMLINDPG--KSFLRFRQSLLLLRL-----NCQKAAMRCLRLARNHSSSE-HERLVYEGWILYDT-GHREEALS 532 (591)
Q Consensus 462 al~~~~~al~~~P~--~~~~~~~~g~~l~~l-----~~~~eA~~~~~~Al~l~p~~-~~a~~~~G~~l~~~-g~~eeAl~ 532 (591)
+.+.++|||++||+ ++.+|..+|.++.++ |.++.|.+.|++|++++|+. .+.++..|..+... |++++|.+
T Consensus 182 A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~ 261 (301)
T 3u64_A 182 AVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDE 261 (301)
T ss_dssp HHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHH
T ss_pred HHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHH
Confidence 45589999999999 777999999999996 99999999999999999975 99999999999885 99999999
Q ss_pred HHHHhhccccc
Q 007721 533 RAEKSISIERT 543 (591)
Q Consensus 533 ~~e~ai~l~~~ 543 (591)
.+++|+++.|.
T Consensus 262 ~L~kAL~a~p~ 272 (301)
T 3u64_A 262 ALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHCCGG
T ss_pred HHHHHHcCCCC
Confidence 99999999887
No 224
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.81 E-value=5.3e-09 Score=86.91 Aligned_cols=85 Identities=9% Similarity=-0.071 Sum_probs=67.7
Q ss_pred HHHHHHHhcCCcHHHHHHHHHHHHcCCCChH-HHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCC
Q 007721 323 WMYQERSLYNLGREKIVDLNYASELDPTLSF-PYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADD 400 (591)
Q Consensus 323 ~a~~~r~~y~~~~eA~~dl~~Ai~LdP~~~~-ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~ 400 (591)
..+...+.+ ++|+..|+++++++|+++. +|.++|.++..+|++++|+..|+++++++|+ +..+.+ +.
T Consensus 8 ~~~~~~~~~---~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~~ 76 (99)
T 2kc7_A 8 KELINQGDI---ENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------KM 76 (99)
T ss_dssp HHHHHHTCH---HHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------HH
T ss_pred HHHHHcCCH---HHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------HH
Confidence 344444444 7888888888888999888 9999999999999999999999999999986 444422 66
Q ss_pred HHHHHHHHHHHHhcCCcc
Q 007721 401 YESALRDTLALLALESNY 418 (591)
Q Consensus 401 ~~~A~~d~~~al~l~P~~ 418 (591)
+.+|+..|++++.++|+.
T Consensus 77 ~~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 77 VMDILNFYNKDMYNQLEH 94 (99)
T ss_dssp HHHHHHHHCCTTHHHHCC
T ss_pred HHHHHHHHHHHhccCccc
Confidence 788888999988888876
No 225
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.79 E-value=5.7e-08 Score=98.97 Aligned_cols=199 Identities=12% Similarity=-0.015 Sum_probs=126.3
Q ss_pred HHHHHHHHhhcc--ccchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcCCcHHHHHHHHHHHHcCC--C
Q 007721 275 ACYYFEAAADAG--HIYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLYNLGREKIVDLNYASELDP--T 350 (591)
Q Consensus 275 A~~~f~~Al~~~--~~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~~~~eA~~dl~~Ai~LdP--~ 350 (591)
|+..+++.++.+ ...++..+|.++...|++++| +..+.+++..+| +
T Consensus 85 a~~~l~~l~~~~~~~~~~~~~la~i~~~~g~~eeA------------------------------L~~l~~~i~~~~~~~ 134 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPYELYLLATAQAILGDLDKS------------------------------LETCVEGIDNDEAEG 134 (310)
T ss_dssp CCHHHHHTTTTSCCCHHHHHHHHHHHHHHTCHHHH------------------------------HHHHHHHHTSSCSTT
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHH------------------------------HHHHHHHhccCCCcC
Confidence 566777666543 223445667777777776544 555555555554 6
Q ss_pred ChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-----hHHHHH--HHHHHHHcC--CHHHHHHHHHHHHhcCCcchhh
Q 007721 351 LSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-----VDCLEL--RAWLFIAAD--DYESALRDTLALLALESNYMMF 421 (591)
Q Consensus 351 ~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-----~~~~~~--r~~~~~~~g--~~~~A~~d~~~al~l~P~~~~~ 421 (591)
..+++...+.+++.+||.+.|...++++.+.+|+ ...... -+|+....| ++++|...|+.+.+..|++.
T Consensus 135 ~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~-- 212 (310)
T 3mv2_B 135 TTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWK-- 212 (310)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHH--
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcc--
Confidence 6666777777777777777777777777777772 222222 345555555 77777777777776666521
Q ss_pred hhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHc----------CCCCchhHhhhHHHHHHhC
Q 007721 422 HGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLIN----------DPGKSFLRFRQSLLLLRLN 491 (591)
Q Consensus 422 ~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~----------~P~~~~~~~~~g~~l~~l~ 491 (591)
....+.. .....+++++| ...+++.++. +|++++++.|+..+-..+|
T Consensus 213 ----~~~lLln-~~~~~g~~~eA------------------e~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lg 269 (310)
T 3mv2_B 213 ----TQLGLLN-LHLQQRNIAEA------------------QGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQG 269 (310)
T ss_dssp ----HHHHHHH-HHHHHTCHHHH------------------HHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTT
T ss_pred ----cHHHHHH-HHHHcCCHHHH------------------HHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhC
Confidence 0011111 33344445555 4455555554 5999999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHH
Q 007721 492 CQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRA 534 (591)
Q Consensus 492 ~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~ 534 (591)
+ +|.+.++++..++|+++....+.. ....||++..+|
T Consensus 270 k--~a~~l~~qL~~~~P~hp~i~d~~~----k~~~Fd~~~~ky 306 (310)
T 3mv2_B 270 L--DTEDLTNQLVKLDHEHAFIKHHQE----IDAKFDELVRKY 306 (310)
T ss_dssp C--TTHHHHHHHHHTTCCCHHHHHHHH----HHHHHHHHHHTC
T ss_pred h--HHHHHHHHHHHhCCCChHHHHHHH----HHHHHHHHHHHh
Confidence 8 799999999999999998776532 334455555544
No 226
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.78 E-value=1.9e-07 Score=105.52 Aligned_cols=237 Identities=9% Similarity=-0.068 Sum_probs=170.5
Q ss_pred HHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHH-HHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Q 007721 338 IVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAI-SEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALE 415 (591)
Q Consensus 338 ~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl-~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~ 415 (591)
...|++|+...|.++..|..-|..+...|+.++|+ ..|.+|++..|. ...+...+.+....|+++.|...|++++..-
T Consensus 329 ~~~Ye~aL~~~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l 408 (679)
T 4e6h_A 329 TYVYMQAAQHVCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSCIDRI 408 (679)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 45799999999999999999999999999999998 999999999996 4445667788999999999999999999863
Q ss_pred Ccchhhhh-hchHhHHHHHHHhhhcccCchhhhhhhhhccccccccc-hHHHHHHHHHc-CCCCchhHhhhHHHHHHhCC
Q 007721 416 SNYMMFHG-RVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIG-SLAVINQMLIN-DPGKSFLRFRQSLLLLRLNC 492 (591)
Q Consensus 416 P~~~~~~~-~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~-al~~~~~al~~-~P~~~~~~~~~g~~l~~l~~ 492 (591)
|....... ..... . ..+... ..+.+..|+.......+.+..+ |.++|.+|+.. .+....+|...+.+..+.|.
T Consensus 409 ~~~~~~~~~~~p~~-~-~~~~~~--~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~ 484 (679)
T 4e6h_A 409 HLDLAALMEDDPTN-E-SAINQL--KSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISK 484 (679)
T ss_dssp HHHHHHHHHHSTTC-H-HHHHHH--HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTS
T ss_pred HHHhhhhhhccCcc-h-hhhhhh--ccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCC
Confidence 21100000 00000 0 000000 0011223444333333333333 57799999988 55567788777777777665
Q ss_pred -HHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccc---cHHHHHHHHHHhhhcCCCCCchhHHH
Q 007721 493 -QKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIER---TFEAFFLKAYILADTNLDPESSTYVI 568 (591)
Q Consensus 493 -~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (591)
.+.|...|+++++..|+++..+...+..+...|+.+.|-+.|++|+...| .....+.+-+.++-..=|.++...|.
T Consensus 485 d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G~~~~~~~v~ 564 (679)
T 4e6h_A 485 DTKTACKVLELGLKYFATDGEYINKYLDFLIYVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVGSLNSVRTLE 564 (679)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCCSHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 89999999999999999998877788888889999999999999999888 45577777777887776776655555
Q ss_pred HHHHHHhcCCCC
Q 007721 569 QLLEEALRCPSD 580 (591)
Q Consensus 569 ~~~~~~~~~~~~ 580 (591)
+-+-+ .||.+
T Consensus 565 ~R~~~--~~P~~ 574 (679)
T 4e6h_A 565 KRFFE--KFPEV 574 (679)
T ss_dssp HHHHH--HSTTC
T ss_pred HHHHH--hCCCC
Confidence 54433 36765
No 227
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.78 E-value=1.2e-07 Score=98.37 Aligned_cols=143 Identities=14% Similarity=0.049 Sum_probs=100.8
Q ss_pred HHHHHhhhHHhhh---ccHHHHHHHHHHHhhccccc--hhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhc
Q 007721 257 LALHQLGCVMFER---EEYKDACYYFEAAADAGHIY--SLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLY 331 (591)
Q Consensus 257 ~a~~~lG~~~~~~---g~~~eA~~~f~~Al~~~~~~--a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y 331 (591)
..++.+|..+... ..+.+|+.+|++|++++|.+ ++.+++.++.... ...+..+......
T Consensus 197 ydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~-------------~~~~~~~~~~~~l--- 260 (372)
T 3ly7_A 197 LTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRH-------------SQHPLDEKQLAAL--- 260 (372)
T ss_dssp HHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-------------HHSCCCHHHHHHH---
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHh-------------ccCCCchhhHHHH---
Confidence 4455566655544 34577888888888886654 4444444433110 0001111000000
Q ss_pred CCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 007721 332 NLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLSVDCLELRAWLFIAADDYESALRDTLAL 411 (591)
Q Consensus 332 ~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~~~~~~~r~~~~~~~g~~~~A~~d~~~a 411 (591)
..+... ..++.++|..+.+|.-+|.++...|++++|+..++||++++|+...+..+|.++.-.|++++|+..|++|
T Consensus 261 ---~~a~~a-~~a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s~~a~~llG~~~~~~G~~~eA~e~~~~A 336 (372)
T 3ly7_A 261 ---NTEIDN-IVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMSWLNYVLLGKVYEMKGMNREAADAYLTA 336 (372)
T ss_dssp ---HHHHHH-HHTCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ---HHHHHH-HHhcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 222221 1355889999999999999999999999999999999999999877888999999999999999999999
Q ss_pred HhcCCcch
Q 007721 412 LALESNYM 419 (591)
Q Consensus 412 l~l~P~~~ 419 (591)
+.++|...
T Consensus 337 lrL~P~~~ 344 (372)
T 3ly7_A 337 FNLRPGAN 344 (372)
T ss_dssp HHHSCSHH
T ss_pred HhcCCCcC
Confidence 99999863
No 228
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.68 E-value=9.2e-07 Score=99.96 Aligned_cols=227 Identities=9% Similarity=-0.084 Sum_probs=169.5
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHhc----CCcHHHH-HHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhc
Q 007721 307 AYKLINSIISEHKPTGWMYQERSLY----NLGREKI-VDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVF 381 (591)
Q Consensus 307 A~~~~~~aI~~~~~~g~a~~~r~~y----~~~~eA~-~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l 381 (591)
....|.+++...|....+|..-+.+ +..++|. ..|++|+...|.....|...+......|++++|...|++++..
T Consensus 328 v~~~Ye~aL~~~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~ 407 (679)
T 4e6h_A 328 MTYVYMQAAQHVCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSCIDR 407 (679)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 3567899999999988888766543 2336786 9999999999999999999999999999999999999999975
Q ss_pred -----------CCC------------hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhh
Q 007721 382 -----------KLS------------VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHV 438 (591)
Q Consensus 382 -----------~p~------------~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~ 438 (591)
.|. ...|...+.+....|+.+.|..-|.+|++..|... .........++...
T Consensus 408 l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~-----~~lyi~~A~lE~~~ 482 (679)
T 4e6h_A 408 IHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVT-----PDIYLENAYIEYHI 482 (679)
T ss_dssp HHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSC-----THHHHHHHHHHHTT
T ss_pred HHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCC-----hHHHHHHHHHHHHh
Confidence 242 12344445566778999999999999998833210 01111111111111
Q ss_pred cccCchhhhhhhhhccccccccc-hHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCc---hHHHH
Q 007721 439 RSWSPADCWIKLYDRWSSVDDIG-SLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSS---EHERL 514 (591)
Q Consensus 439 ~~~~~a~~~~~l~~~~~~~~~~~-al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~---~~~a~ 514 (591)
.++.+ |..+|+++|...|.++.+|...+..+..+|+.+.|...|++|+...|+ ....+
T Consensus 483 ------------------~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~~~~~~~lw 544 (679)
T 4e6h_A 483 ------------------SKDTKTACKVLELGLKYFATDGEYINKYLDFLIYVNEESQVKSLFESSIDKISDSHLLKMIF 544 (679)
T ss_dssp ------------------TSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSSTTHHHHHH
T ss_pred ------------------CCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 12222 578999999999999999999999999999999999999999999984 34444
Q ss_pred HhHHHHHHHcCCHHHHHHHHHHhhcccccHH--HHHHHHHHhhh
Q 007721 515 VYEGWILYDTGHREEALSRAEKSISIERTFE--AFFLKAYILAD 556 (591)
Q Consensus 515 ~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~--~~~~~~~~~~~ 556 (591)
...-..-...|+.+.+...++|+....|+.. ..|..=|.+.+
T Consensus 545 ~~~~~fE~~~G~~~~~~~v~~R~~~~~P~~~~~~~f~~ry~~~~ 588 (679)
T 4e6h_A 545 QKVIFFESKVGSLNSVRTLEKRFFEKFPEVNKLEEFTNKYKVLD 588 (679)
T ss_dssp HHHHHHHHHTCCSHHHHHHHHHHHHHSTTCCHHHHHHHHTCBTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCc
Confidence 3333444466999999999999999998855 55555554443
No 229
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.67 E-value=5.9e-08 Score=81.06 Aligned_cols=71 Identities=10% Similarity=-0.079 Sum_probs=68.3
Q ss_pred CCCCchhHhhhHHHHHHhCC---HHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhccccc
Q 007721 473 DPGKSFLRFRQSLLLLRLNC---QKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERT 543 (591)
Q Consensus 473 ~P~~~~~~~~~g~~l~~l~~---~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~ 543 (591)
+|.++++++.+|.+|...+. .++|...+++|++++|+++.+++.+|.+++..|+|++|+..|+++++.+|.
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 79999999999999998877 689999999999999999999999999999999999999999999999887
No 230
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.61 E-value=1.5e-07 Score=79.55 Aligned_cols=79 Identities=27% Similarity=0.337 Sum_probs=69.7
Q ss_pred eEEEE-cCeEEEhhHHHHhhcCHHHHHhhcCCCCCCCCceeEecCCCCCHHHHHHHHHHHhcCC--------------CC
Q 007721 57 VTFCV-RDKEISFVRNKIASLSSPFKAMLYGGFVESKRKTIDFSHDGVSVEGLRAVEVYTRTSR--------------VD 121 (591)
Q Consensus 57 V~f~v-~g~~~~aHr~iLaa~S~yF~amf~~~~~Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~--------------~~ 121 (591)
|+++. +|+.|.++|.+ |..|.+++.||.+++ |+..+.|.| ++|+..+++.+++|+|.-+ ..
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Ipl--p~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~ 81 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIEL--KQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFE 81 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEE--TTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCC
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceec--CCcCHHHHHHHHHHHHHhcccCCCccccccCCCcc
Confidence 88887 89999999997 899999999999877 766679999 9999999999999999732 23
Q ss_pred CCChhHHHHHHHHHhhhCh
Q 007721 122 LFCPGIVLELLSFANRFCC 140 (591)
Q Consensus 122 ~~~~~~v~~lL~~A~~~~i 140 (591)
++.+++.+|+.+||+++|
T Consensus 82 -vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 82 -IPTEMSLELLLAADYLSI 99 (99)
T ss_dssp -CCHHHHHHHHHHHHHHCC
T ss_pred -CCHHHHHHHHHHHHHhCc
Confidence 788999999999999875
No 231
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.60 E-value=2.8e-07 Score=82.47 Aligned_cols=118 Identities=9% Similarity=0.015 Sum_probs=95.4
Q ss_pred CCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCch
Q 007721 399 DDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSF 478 (591)
Q Consensus 399 g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~ 478 (591)
+|+++|+..|+++.+..+... . ++.+.......++ |+..++++.+. +++.
T Consensus 9 ~d~~~A~~~~~~aa~~g~~~a--------~--lg~~y~~g~~~~~------------------A~~~~~~Aa~~--g~~~ 58 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEMFG--------C--LSLVSNSQINKQK------------------LFQYLSKACEL--NSGN 58 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCTTH--------H--HHHHTCTTSCHHH------------------HHHHHHHHHHT--TCHH
T ss_pred cCHHHHHHHHHHHHcCCCHhh--------h--HHHHHHcCCCHHH------------------HHHHHHHHHcC--CCHH
Confidence 578999999999999885442 1 2222222111111 58899999987 8999
Q ss_pred hHhhhHHHHHH----hCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHH----cCCHHHHHHHHHHhhcccccHHHHH
Q 007721 479 LRFRQSLLLLR----LNCQKAAMRCLRLARNHSSSEHERLVYEGWILYD----TGHREEALSRAEKSISIERTFEAFF 548 (591)
Q Consensus 479 ~~~~~g~~l~~----l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~----~g~~eeAl~~~e~ai~l~~~~~~~~ 548 (591)
+++++|.++.. .+++++|+..|++|.+. .++++++++|.++.. .+++++|+..|++|.+.......+.
T Consensus 59 a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~~A~~~ 134 (138)
T 1klx_A 59 GCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGSEDACGI 134 (138)
T ss_dssp HHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCCCHHHHHH
Confidence 99999999999 89999999999999998 689999999999999 9999999999999999865544443
No 232
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.56 E-value=2e-07 Score=101.45 Aligned_cols=132 Identities=8% Similarity=-0.071 Sum_probs=105.7
Q ss_pred hHHHHHHHhCCHHHHHHHHHHHHhcC-----CC-h---HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchH
Q 007721 357 YRAVAKMEEGQIRAAISEIDRIIVFK-----LS-V---DCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSG 427 (591)
Q Consensus 357 ~rg~~l~~l~~~~eAl~~~~~al~l~-----p~-~---~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~ 427 (591)
..+..+..+|+|++|+..++++|++. |+ + ..+.++|.+|..+|+|++|+..|++++++.-.. +|
T Consensus 314 e~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~---lG---- 386 (490)
T 3n71_A 314 EKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKL---YH---- 386 (490)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH---SC----
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH---cC----
Confidence 34446778999999999999999872 32 3 446778999999999999999999999863211 00
Q ss_pred hHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcC
Q 007721 428 DHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHS 507 (591)
Q Consensus 428 ~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~ 507 (591)
...|.-+..++|+|.++..+|++++|+..|++|+++.
T Consensus 387 -------------------------------------------~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~ 423 (490)
T 3n71_A 387 -------------------------------------------HNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAIL 423 (490)
T ss_dssp -------------------------------------------TTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 0123345568999999999999999999999999753
Q ss_pred --------CchHHHHHhHHHHHHHcCCHHHHHHHHHHhh
Q 007721 508 --------SSEHERLVYEGWILYDTGHREEALSRAEKSI 538 (591)
Q Consensus 508 --------p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai 538 (591)
|+-++.+.+++.++..+|.+++|...|.+|.
T Consensus 424 ~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~ 462 (490)
T 3n71_A 424 LVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMR 462 (490)
T ss_dssp HHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456777899999999999999999999984
No 233
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.54 E-value=1.2e-06 Score=78.26 Aligned_cols=114 Identities=14% Similarity=0.121 Sum_probs=92.1
Q ss_pred hccHHHHHHHHHHHhhccccchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcCCcHHHHHHHHHHHHcC
Q 007721 269 REEYKDACYYFEAAADAGHIYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLYNLGREKIVDLNYASELD 348 (591)
Q Consensus 269 ~g~~~eA~~~f~~Al~~~~~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~~~~eA~~dl~~Ai~Ld 348 (591)
.+++++|+.+|++|.+.++..+. +|.++...++. ++|+..|++|.+.
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~~a~--lg~~y~~g~~~------------------------------~~A~~~~~~Aa~~- 54 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEMFGC--LSLVSNSQINK------------------------------QKLFQYLSKACEL- 54 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTHH--HHHHTCTTSCH------------------------------HHHHHHHHHHHHT-
T ss_pred ccCHHHHHHHHHHHHcCCCHhhh--HHHHHHcCCCH------------------------------HHHHHHHHHHHcC-
Confidence 35678888888888888766665 66555444433 3466677777776
Q ss_pred CCChHHHHhHHHHHHH----hCCHHHHHHHHHHHHhcCCChHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcCCc
Q 007721 349 PTLSFPYKYRAVAKME----EGQIRAAISEIDRIIVFKLSVDCLELRAWLFIA----ADDYESALRDTLALLALESN 417 (591)
Q Consensus 349 P~~~~ay~~rg~~l~~----l~~~~eAl~~~~~al~l~p~~~~~~~r~~~~~~----~g~~~~A~~d~~~al~l~P~ 417 (591)
.++.+++++|.+|.. .+++++|+..|++|.+. -++.+.+++|.+|.. .+|+++|+..|++|.++...
T Consensus 55 -g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~-g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~ 129 (138)
T 1klx_A 55 -NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL-NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGSE 129 (138)
T ss_dssp -TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCH
T ss_pred -CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC-CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCCCH
Confidence 688999999999999 89999999999999976 457888999999999 99999999999999998654
No 234
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.54 E-value=5e-07 Score=77.44 Aligned_cols=93 Identities=10% Similarity=0.001 Sum_probs=77.1
Q ss_pred eEEEEcCeEEEhhHHHHhhcC-HHHHHhhcCCCC----CCCCceeEecCCCCCHHHHHHHHHHHhcCCCCCCChh-HHHH
Q 007721 57 VTFCVRDKEISFVRNKIASLS-SPFKAMLYGGFV----ESKRKTIDFSHDGVSVEGLRAVEVYTRTSRVDLFCPG-IVLE 130 (591)
Q Consensus 57 V~f~v~g~~~~aHr~iLaa~S-~yF~amf~~~~~----Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~~~~~~~~-~v~~ 130 (591)
|+|.|||..|...+..|.... .+|.+||.+... ....+++-| +-+|..|+.||+|+.||++. ++.+ ....
T Consensus 8 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi---DRdp~~F~~IL~~lr~g~l~-~p~~~~~~~ 83 (107)
T 3drz_A 8 VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI---DRDPTYFGPVLNYLRHGKLV-INKDLAEEG 83 (107)
T ss_dssp EEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE---CSCHHHHHHHHHHHHHSCCC-CCTTSCHHH
T ss_pred EEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe---cCChHHHHHHHHHhCCCeeC-CCCCCCHHH
Confidence 999999999999999998775 468999987521 123457777 67999999999999999998 5443 3578
Q ss_pred HHHHHhhhChHHHHHHHHHHHHh
Q 007721 131 LLSFANRFCCEEMKSACDAHLAS 153 (591)
Q Consensus 131 lL~~A~~~~i~~L~~~C~~~L~~ 153 (591)
++.-|.+|+|+.|.+.|.+.+.+
T Consensus 84 l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 84 VLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHhc
Confidence 99999999999999999987764
No 235
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.53 E-value=2.1e-07 Score=84.51 Aligned_cols=90 Identities=13% Similarity=0.037 Sum_probs=81.9
Q ss_pred HHHHHHHHHcCCCCchhHhhhHHHHHHhC---CHHHHHHHHHHHHhcC-C-chHHHHHhHHHHHHHcCCHHHHHHHHHHh
Q 007721 463 LAVINQMLINDPGKSFLRFRQSLLLLRLN---CQKAAMRCLRLARNHS-S-SEHERLVYEGWILYDTGHREEALSRAEKS 537 (591)
Q Consensus 463 l~~~~~al~~~P~~~~~~~~~g~~l~~l~---~~~eA~~~~~~Al~l~-p-~~~~a~~~~G~~l~~~g~~eeAl~~~e~a 537 (591)
-..|+..+..+|.+.++.|+.|.+|.+.+ ..++|+..++..++.+ | +..+.+|++|..+|++|+|++|....+++
T Consensus 18 ~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~l 97 (152)
T 1pc2_A 18 EKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGL 97 (152)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 33688889999999999999999999988 5669999999999999 8 67999999999999999999999999999
Q ss_pred hcccccHH-HHHHHHH
Q 007721 538 ISIERTFE-AFFLKAY 552 (591)
Q Consensus 538 i~l~~~~~-~~~~~~~ 552 (591)
++++|++. |-.||-.
T Consensus 98 L~ieP~n~QA~~Lk~~ 113 (152)
T 1pc2_A 98 LQTEPQNNQAKELERL 113 (152)
T ss_dssp HHHCTTCHHHHHHHHH
T ss_pred HhcCCCCHHHHHHHHH
Confidence 99999887 7777654
No 236
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.48 E-value=1.8e-07 Score=78.48 Aligned_cols=80 Identities=31% Similarity=0.416 Sum_probs=63.9
Q ss_pred eEEEE-cCeEEEhhHHHHhhcCHHHHHhhcC--CCCCCCCceeEecCCCCCHHHHHHHHHHHhcCC-----------CCC
Q 007721 57 VTFCV-RDKEISFVRNKIASLSSPFKAMLYG--GFVESKRKTIDFSHDGVSVEGLRAVEVYTRTSR-----------VDL 122 (591)
Q Consensus 57 V~f~v-~g~~~~aHr~iLaa~S~yF~amf~~--~~~Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~-----------~~~ 122 (591)
|+++. +|+.|.++|.+ |..|.+++.||.+ .+.|+..+.|.| ++|+..+++.+++|+|.-. ..
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl--~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~- 78 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNF--REIPSHVLSKVCMYFTYKVRYTNSSTEIPEFP- 78 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEEC--SSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCC-
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeC--CCCCHHHHHHHHHHHHHccccCCCcccCCCcc-
Confidence 56665 78999999997 8999999999985 347877789999 9999999999999998632 23
Q ss_pred CChhHHHHHHHHHhhhCh
Q 007721 123 FCPGIVLELLSFANRFCC 140 (591)
Q Consensus 123 ~~~~~v~~lL~~A~~~~i 140 (591)
++.+++.+|+.+||+++|
T Consensus 79 vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 79 IAPEIALELLMAANFLDC 96 (96)
T ss_dssp CCTTTHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCc
Confidence 788999999999999875
No 237
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.48 E-value=7.7e-07 Score=82.69 Aligned_cols=96 Identities=15% Similarity=0.121 Sum_probs=79.0
Q ss_pred eEEEE-cCeEEEhhHHHHhhcCHHHHHhhcCCCC----CCCCceeEecCCCCCHHHHHHHHHHHhcCC------------
Q 007721 57 VTFCV-RDKEISFVRNKIASLSSPFKAMLYGGFV----ESKRKTIDFSHDGVSVEGLRAVEVYTRTSR------------ 119 (591)
Q Consensus 57 V~f~v-~g~~~~aHr~iLaa~S~yF~amf~~~~~----Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~------------ 119 (591)
|+++. +|+.|.+++.+ |..|..++.|+..... +.....|.| ++|+..+++.|++|++.-.
T Consensus 9 i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~Ipl--pnV~s~iL~kVieyc~~h~~~~~~~~~~~~~ 85 (169)
T 3v7d_A 9 VVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPV--PNVRSSVLQKVIEWAEHHRDSNFPDEDDDDS 85 (169)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEEC--TTCCHHHHHHHHHHHHHTTTCCCCC------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceee--CCCCHHHHHHHHHHHHHcccCCCcccccccc
Confidence 77776 68999999998 7889999999975433 233468999 9999999999999998743
Q ss_pred -------------CCCCChhHHHHHHHHHhhhChHHHHHHHHHHHHhhcC
Q 007721 120 -------------VDLFCPGIVLELLSFANRFCCEEMKSACDAHLASLVG 156 (591)
Q Consensus 120 -------------~~~~~~~~v~~lL~~A~~~~i~~L~~~C~~~L~~~i~ 156 (591)
+. ++.+.+.+|+.+||+++|.+|.+.|++.++..+.
T Consensus 86 ~~~~~i~~wD~~Fl~-vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ik 134 (169)
T 3v7d_A 86 RKSAPVDSWDREFLK-VDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIR 134 (169)
T ss_dssp --CCCCCHHHHHHTC-SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred cccccccHHHHHHHc-CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHc
Confidence 12 6778899999999999999999999999998886
No 238
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.44 E-value=7.3e-07 Score=75.66 Aligned_cols=77 Identities=14% Similarity=0.075 Sum_probs=69.3
Q ss_pred CchhHhhhHHHHHHhCCHHHHHHHHHHHHhcC-------CchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH-HH
Q 007721 476 KSFLRFRQSLLLLRLNCQKAAMRCLRLARNHS-------SSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFE-AF 547 (591)
Q Consensus 476 ~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~-------p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~-~~ 547 (591)
++.-++.+|..+...|+++.|+.+|++|++.. +..++.+.++|.+++.+|++++|+..+++|++++|+.. +.
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 45668899999999999999999999999963 56789999999999999999999999999999999988 66
Q ss_pred HHHHH
Q 007721 548 FLKAY 552 (591)
Q Consensus 548 ~~~~~ 552 (591)
+++++
T Consensus 84 ~n~~~ 88 (104)
T 2v5f_A 84 GNLKY 88 (104)
T ss_dssp HHHHH
T ss_pred hhHHH
Confidence 66664
No 239
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.41 E-value=1.1e-06 Score=73.14 Aligned_cols=71 Identities=10% Similarity=0.018 Sum_probs=65.0
Q ss_pred CCCChHHHHhHHHHHHHhCC---HHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcc
Q 007721 348 DPTLSFPYKYRAVAKMEEGQ---IRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNY 418 (591)
Q Consensus 348 dP~~~~ay~~rg~~l~~l~~---~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~ 418 (591)
+|+++..+..+|.++...++ .++|...+++||+++|+ +.++..+|..+...|+|++|+..++++++.+|..
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 69999999999999987666 79999999999999996 8888999999999999999999999999999983
No 240
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.41 E-value=2.6e-06 Score=92.71 Aligned_cols=132 Identities=8% Similarity=-0.020 Sum_probs=102.0
Q ss_pred hhhHHhhhccHHHHHHHHHHHhhc-------ccc---chhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhc
Q 007721 262 LGCVMFEREEYKDACYYFEAAADA-------GHI---YSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLY 331 (591)
Q Consensus 262 lG~~~~~~g~~~eA~~~f~~Al~~-------~~~---~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y 331 (591)
....+..+|+|++|+..|++++++ +|. .++.++|.++..+|++++|...+.++++.+. ..+
T Consensus 315 ~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~---------~~l 385 (490)
T 3n71_A 315 KIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYM---------KLY 385 (490)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH---------HHS
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH---------HHc
Confidence 334456789999999999999887 122 3577889999999999999988888877641 001
Q ss_pred CCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhc-----CCC-hHH---HHHHHHHHHHcCCHH
Q 007721 332 NLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVF-----KLS-VDC---LELRAWLFIAADDYE 402 (591)
Q Consensus 332 ~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l-----~p~-~~~---~~~r~~~~~~~g~~~ 402 (591)
=.-.|+-+..++|+|.+|..+|++++|+..|++|+++ -|+ |.. ..+++.++.++|.++
T Consensus 386 -------------G~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~ 452 (490)
T 3n71_A 386 -------------HHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFR 452 (490)
T ss_dssp -------------CTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------------CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 0112444677899999999999999999999999987 354 433 456778999999999
Q ss_pred HHHHHHHHHHhcC
Q 007721 403 SALRDTLALLALE 415 (591)
Q Consensus 403 ~A~~d~~~al~l~ 415 (591)
+|...|+++.+-.
T Consensus 453 ~ae~~~~~~~~~~ 465 (490)
T 3n71_A 453 QNEFMYHKMREAA 465 (490)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999987644
No 241
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.34 E-value=2.5e-06 Score=77.40 Aligned_cols=99 Identities=15% Similarity=0.085 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhC---CHHHHHHHHHHHHhcC-C-C-hHHHHHHHHHHHHcCCHHHHHHHH
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEG---QIRAAISEIDRIIVFK-L-S-VDCLELRAWLFIAADDYESALRDT 408 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~---~~~eAl~~~~~al~l~-p-~-~~~~~~r~~~~~~~g~~~~A~~d~ 408 (591)
..+...|++++..+|...++.++.|.++...+ ++++||..+..+++.+ | + .+++|++|..+.++|+|++|++.+
T Consensus 15 ~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~ 94 (152)
T 1pc2_A 15 LKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYV 94 (152)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHH
Confidence 44566788899999999999999999999988 6779999999999999 7 3 789999999999999999999999
Q ss_pred HHHHhcCCcchhhhhhchHhHHHHHHHhhhc
Q 007721 409 LALLALESNYMMFHGRVSGDHLVKLLNHHVR 439 (591)
Q Consensus 409 ~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~ 439 (591)
+++++++|++ ..+..++..+....+
T Consensus 95 ~~lL~ieP~n------~QA~~Lk~~ie~~~~ 119 (152)
T 1pc2_A 95 RGLLQTEPQN------NQAKELERLIDKAMK 119 (152)
T ss_dssp HHHHHHCTTC------HHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCC------HHHHHHHHHHHHHHH
Confidence 9999999988 566666666655543
No 242
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.28 E-value=2.9e-05 Score=77.67 Aligned_cols=84 Identities=12% Similarity=0.052 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHcCCC--ChHHHHhHHHHHHHh-----CCHHHHHHHHHHHHhcCCC--hHHHHHHHHHHHH-cCCHHHH
Q 007721 335 REKIVDLNYASELDPT--LSFPYKYRAVAKMEE-----GQIRAAISEIDRIIVFKLS--VDCLELRAWLFIA-ADDYESA 404 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~--~~~ay~~rg~~l~~l-----~~~~eAl~~~~~al~l~p~--~~~~~~r~~~~~~-~g~~~~A 404 (591)
..|...+++|+++||+ +..+|..+|.+|... |+.++|...|+|||+++|+ .+..+..|..+.. +||+++|
T Consensus 180 ~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a 259 (301)
T 3u64_A 180 HAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGF 259 (301)
T ss_dssp HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHH
T ss_pred HHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHH
Confidence 6788899999999999 566999999999996 9999999999999999994 6777778887766 5999999
Q ss_pred HHHHHHHHhcCCcc
Q 007721 405 LRDTLALLALESNY 418 (591)
Q Consensus 405 ~~d~~~al~l~P~~ 418 (591)
.+.+++|++.+|..
T Consensus 260 ~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 260 DEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHCCGGG
T ss_pred HHHHHHHHcCCCCC
Confidence 99999999999985
No 243
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=98.26 E-value=0.00067 Score=73.71 Aligned_cols=342 Identities=6% Similarity=-0.105 Sum_probs=189.6
Q ss_pred hcchhHHHHHHHHHhhhhccccchhHHHHHHHHhh-cch-hhhHHHHHHHHhhhHHhhhc-cHHHHHHHHHHHhhc-c--
Q 007721 213 VGHASFLLYYFLSQVAMEKDRVSNTTVMLLERLGE-CST-ERWQRMLALHQLGCVMFERE-EYKDACYYFEAAADA-G-- 286 (591)
Q Consensus 213 ~~~~~~~~~a~Ls~v~~d~~~r~~~~v~lLe~~~~-~~~-~~~~~~~a~~~lG~~~~~~g-~~~eA~~~f~~Al~~-~-- 286 (591)
+.+...++..++.+.-. ...+.+..++++++. +|. +-|.....+... .+ ..+.....|+.|+.. +
T Consensus 11 i~~aR~vyer~l~~~P~---~~~e~~~~iferal~~~ps~~LW~~Y~~f~~~------~~~~~~~i~~~fe~al~~vg~d 81 (493)
T 2uy1_A 11 LSSPSAIMEHARRLYMS---KDYRSLESLFGRCLKKSYNLDLWMLYIEYVRK------VSQKKFKLYEVYEFTLGQFENY 81 (493)
T ss_dssp -CCHHHHHHHHHHHHHT---TCHHHHHHHHHHHSTTCCCHHHHHHHHHHHHH------HC----CTHHHHHHHHHHSTTC
T ss_pred hHHHHHHHHHHHHHCCC---CCHHHHHHHHHHHhccCCCHHHHHHHHHHHHH------hCchHHHHHHHHHHHHHHcCCC
Confidence 45666777777777543 336678899999886 332 122222222211 12 224455678888865 2
Q ss_pred ccchhhhhHHHHH------HhCChHHHHHHHHHHHHhcCCC--HHHHHHHHh----cC-------------CcHHHHHHH
Q 007721 287 HIYSLAGLARAKY------KVGQQYSAYKLINSIISEHKPT--GWMYQERSL----YN-------------LGREKIVDL 341 (591)
Q Consensus 287 ~~~a~~~la~~~~------~~G~~~~A~~~~~~aI~~~~~~--g~a~~~r~~----y~-------------~~~eA~~dl 341 (591)
+...-....-+.+ ..|+.+.+...|.++|.. |.. ...|..-.. ++ ....|...|
T Consensus 82 ~~s~~iW~~Yi~f~~~~~~~~~~~~~vR~iy~rAL~~-P~~~~~~lw~~Y~~fE~~~~~~~~~~~~~~~~~~y~~ar~~y 160 (493)
T 2uy1_A 82 WDSYGLYKEYIEEEGKIEDEQTRIEKIRNGYMRALQT-PMGSLSELWKDFENFELELNKITGKKIVGDTLPIFQSSFQRY 160 (493)
T ss_dssp TTCHHHHHHHHHHTSSCSSHHHHHHHHHHHHHHHHTS-CCTTHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHhchhhhHHHHHHHHHHHHHHhC-hhhhHHHHHHHHHHHHHHhccccHHHHHHHHhHHHHHHHHHH
Confidence 2111112222222 235567788889999884 421 111110000 00 001223334
Q ss_pred HHHHHcCCC-ChHHHHhHHHHHHHhCC---------HHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHH
Q 007721 342 NYASELDPT-LSFPYKYRAVAKMEEGQ---------IRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLA 410 (591)
Q Consensus 342 ~~Ai~LdP~-~~~ay~~rg~~l~~l~~---------~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~ 410 (591)
..+...-|. ....|.. .+-.+.++ .+.....|+++|...|. +..|..-+..+...|+.++|..-|++
T Consensus 161 ~~~~~~~~~~s~~~W~~--y~~~E~~~~~~~~~~~~~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~~~~~~ar~i~er 238 (493)
T 2uy1_A 161 QQIQPLIRGWSVKNAAR--LIDLEMENGMKLGGRPHESRMHFIHNYILDSFYYAEEVYFFYSEYLIGIGQKEKAKKVVER 238 (493)
T ss_dssp HHHHHHHHTCSHHHHHH--HHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHhhccHHHHHH--HHHHHhcCCccCcchhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 444433222 2223433 23333332 34467899999998885 67777777788889999999999999
Q ss_pred HHhcCCcchhhhhhchHh----HHHHHHHhhhcccC-----------chhhhhhhhhccccccccc-hHHHHHHHHHcCC
Q 007721 411 LLALESNYMMFHGRVSGD----HLVKLLNHHVRSWS-----------PADCWIKLYDRWSSVDDIG-SLAVINQMLINDP 474 (591)
Q Consensus 411 al~l~P~~~~~~~~~~~~----~~~~~l~~~~~~~~-----------~a~~~~~l~~~~~~~~~~~-al~~~~~al~~~P 474 (591)
|+.. |........-+.. ...+.+.......+ ....|++......+.++.. |-.+|.+| . .|
T Consensus 239 Ai~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~-~~ 315 (493)
T 2uy1_A 239 GIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-G-NE 315 (493)
T ss_dssp HHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-T-TS
T ss_pred HHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-h-CC
Confidence 9999 9875422110000 00111111110000 0122333332222223334 66789999 4 44
Q ss_pred C-CchhHhhhHHHHHHhC-CHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHHHHHHHHH
Q 007721 475 G-KSFLRFRQSLLLLRLN-CQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFEAFFLKAY 552 (591)
Q Consensus 475 ~-~~~~~~~~g~~l~~l~-~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~~~~~~~~ 552 (591)
+ ....|...+.+...+| .++.|...++++++.-|++++.....+..+...|+.+.|-..|+++.. ...++.+-.
T Consensus 316 ~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~~~~aR~l~er~~k----~~~lw~~~~ 391 (493)
T 2uy1_A 316 GVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGDEENARALFKRLEK----TSRMWDSMI 391 (493)
T ss_dssp CCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHSCC----BHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----HHHHHHHHH
Confidence 4 5567777777777777 599999999999999999988766667777889999999999999843 345555555
Q ss_pred HhhhcCCCCCchhHHHHHHHHHhc
Q 007721 553 ILADTNLDPESSTYVIQLLEEALR 576 (591)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~ 576 (591)
.++-+.=|. .++-.+++.+++
T Consensus 392 ~fE~~~G~~---~~~r~v~~~~~~ 412 (493)
T 2uy1_A 392 EYEFMVGSM---ELFRELVDQKMD 412 (493)
T ss_dssp HHHHHHSCH---HHHHHHHHHHHH
T ss_pred HHHHHCCCH---HHHHHHHHHHHH
Confidence 555554333 344455666654
No 244
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.15 E-value=3.3e-06 Score=90.37 Aligned_cols=65 Identities=11% Similarity=0.060 Sum_probs=58.8
Q ss_pred chhHhhhHHHHHHhCCHHHHHHHHHHHHhc--------CCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhccc
Q 007721 477 SFLRFRQSLLLLRLNCQKAAMRCLRLARNH--------SSSEHERLVYEGWILYDTGHREEALSRAEKSISIE 541 (591)
Q Consensus 477 ~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l--------~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~ 541 (591)
+..+.++|.++..+|++++|+..+++|+++ .|+-+..++|+|.++..+|+++||+..|+||++|.
T Consensus 340 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 340 LHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIM 412 (433)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 356788999999999999999999999976 46677889999999999999999999999999873
No 245
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=98.06 E-value=6.6e-06 Score=70.86 Aligned_cols=80 Identities=31% Similarity=0.404 Sum_probs=63.7
Q ss_pred eEEE-EcCeEEEhhHHHHhhcCHHHHHhhcC--CCCCCCCceeEecCCCCCHHHHHHHHHHHhcCC-----------CCC
Q 007721 57 VTFC-VRDKEISFVRNKIASLSSPFKAMLYG--GFVESKRKTIDFSHDGVSVEGLRAVEVYTRTSR-----------VDL 122 (591)
Q Consensus 57 V~f~-v~g~~~~aHr~iLaa~S~yF~amf~~--~~~Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~-----------~~~ 122 (591)
|+++ -+|+.|.++|. .|..|..++.|+.. .+.|+....|.| ++|+..+++.+++|++.-. +.
T Consensus 19 v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~~~~~Ipl--pnV~s~iL~kVieyc~~h~~~~~~~~~i~~w~- 94 (112)
T 1vcb_B 19 VKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAENETNEVNF--REIPSHVLSKVCMYFTYKVRYTNSSTEIPEFP- 94 (112)
T ss_dssp EEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC--------CEEEC--SSCCHHHHHHHHHHHHHHHHHSSCSSCCCCCC-
T ss_pred EEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCcccccCCceeC--CCCCHHHHHHHHHHHHHhhhccCCcCCCCCcc-
Confidence 8887 47899999999 47899999999984 456776678999 9999999999999998632 23
Q ss_pred CChhHHHHHHHHHhhhCh
Q 007721 123 FCPGIVLELLSFANRFCC 140 (591)
Q Consensus 123 ~~~~~v~~lL~~A~~~~i 140 (591)
++.+++.+|+.+||+++|
T Consensus 95 vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 95 IAPEIALELLMAANFLDC 112 (112)
T ss_dssp CCHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCc
Confidence 788999999999999875
No 246
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.02 E-value=1.6e-05 Score=67.26 Aligned_cols=88 Identities=9% Similarity=-0.127 Sum_probs=72.4
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchH
Q 007721 384 SVDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSL 463 (591)
Q Consensus 384 ~~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al 463 (591)
++...+..|..+...|+|+.|+..|++|+++.+...
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~-------------------------------------------- 39 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGE-------------------------------------------- 39 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTC--------------------------------------------
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccC--------------------------------------------
Confidence 455567889999999999999999999998764320
Q ss_pred HHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHH
Q 007721 464 AVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILY 522 (591)
Q Consensus 464 ~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~ 522 (591)
...+..++.+.++|.++.++|++++|+..+++|++++|++..++.|+++.-.
T Consensus 40 -------~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n~~~~~~ 91 (104)
T 2v5f_A 40 -------ISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKYFEY 91 (104)
T ss_dssp -------CCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred -------CCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhhHHHHHH
Confidence 0123445778899999999999999999999999999999999999985443
No 247
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.89 E-value=0.00039 Score=75.55 Aligned_cols=78 Identities=12% Similarity=0.016 Sum_probs=38.2
Q ss_pred ccHHHHHHHHHHHhhccc-cchhhhhHHHHHHhCC-hHHHHHHHHHHHHh---cCCCHHHHHHHHhcCC--------cHH
Q 007721 270 EEYKDACYYFEAAADAGH-IYSLAGLARAKYKVGQ-QYSAYKLINSIISE---HKPTGWMYQERSLYNL--------GRE 336 (591)
Q Consensus 270 g~~~eA~~~f~~Al~~~~-~~a~~~la~~~~~~G~-~~~A~~~~~~aI~~---~~~~g~a~~~r~~y~~--------~~e 336 (591)
|+++.+...|++++..-| ...+..........|+ .+.....|..++.. ++..+..+..-..+.. .+.
T Consensus 28 ~~~e~~~~iferal~~~ps~~LW~~Y~~f~~~~~~~~~~i~~~fe~al~~vg~d~~s~~iW~~Yi~f~~~~~~~~~~~~~ 107 (493)
T 2uy1_A 28 KDYRSLESLFGRCLKKSYNLDLWMLYIEYVRKVSQKKFKLYEVYEFTLGQFENYWDSYGLYKEYIEEEGKIEDEQTRIEK 107 (493)
T ss_dssp TCHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHC----CTHHHHHHHHHHSTTCTTCHHHHHHHHHHTSSCSSHHHHHHH
T ss_pred CCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHhchhhhHHHHH
Confidence 788888889999888633 2333333322222332 12233445555542 4445555544433211 133
Q ss_pred HHHHHHHHHHc
Q 007721 337 KIVDLNYASEL 347 (591)
Q Consensus 337 A~~dl~~Ai~L 347 (591)
+...|++|++.
T Consensus 108 vR~iy~rAL~~ 118 (493)
T 2uy1_A 108 IRNGYMRALQT 118 (493)
T ss_dssp HHHHHHHHHTS
T ss_pred HHHHHHHHHhC
Confidence 45566666664
No 248
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.82 E-value=2.9e-05 Score=82.97 Aligned_cols=64 Identities=9% Similarity=-0.035 Sum_probs=57.3
Q ss_pred chhHhhhHHHHHHhCCHHHHHHHHHHHHhc--------CCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcc
Q 007721 477 SFLRFRQSLLLLRLNCQKAAMRCLRLARNH--------SSSEHERLVYEGWILYDTGHREEALSRAEKSISI 540 (591)
Q Consensus 477 ~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l--------~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l 540 (591)
+..+.++|.++..+|++++|+..+++++++ .|+-+..++++|.++..+|++++|+..|+||++|
T Consensus 329 ~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 329 LKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 456788999999999999999999999965 3566778999999999999999999999999986
No 249
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.80 E-value=3.2e-05 Score=82.76 Aligned_cols=82 Identities=9% Similarity=-0.011 Sum_probs=67.2
Q ss_pred CcHHHHHHHHHHHH-----cCCCC---hHHHHhHHHHHHHhCCHHHHHHHHHHHHhc-----CCC-h---HHHHHHHHHH
Q 007721 333 LGREKIVDLNYASE-----LDPTL---SFPYKYRAVAKMEEGQIRAAISEIDRIIVF-----KLS-V---DCLELRAWLF 395 (591)
Q Consensus 333 ~~~eA~~dl~~Ai~-----LdP~~---~~ay~~rg~~l~~l~~~~eAl~~~~~al~l-----~p~-~---~~~~~r~~~~ 395 (591)
..++|...|+++++ |.|++ +..+.++|.+|..+|+|++|+..++++|++ -|+ | ..++++|.+|
T Consensus 313 ~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~ 392 (433)
T 3qww_A 313 SPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLY 392 (433)
T ss_dssp CHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHH
Confidence 33677777777766 34444 577899999999999999999999999987 233 4 3467899999
Q ss_pred HHcCCHHHHHHHHHHHHhc
Q 007721 396 IAADDYESALRDTLALLAL 414 (591)
Q Consensus 396 ~~~g~~~~A~~d~~~al~l 414 (591)
..+|++++|+..|++|+++
T Consensus 393 ~~qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 393 MGLENKAAGEKALKKAIAI 411 (433)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HhccCHHHHHHHHHHHHHH
Confidence 9999999999999999985
No 250
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.80 E-value=5.9e-05 Score=65.95 Aligned_cols=89 Identities=15% Similarity=0.078 Sum_probs=81.6
Q ss_pred HHHHHHHcCCCCchhHhhhHHHHHHhCCHHH---HHHHHHHHHhcC-C-chHHHHHhHHHHHHHcCCHHHHHHHHHHhhc
Q 007721 465 VINQMLINDPGKSFLRFRQSLLLLRLNCQKA---AMRCLRLARNHS-S-SEHERLVYEGWILYDTGHREEALSRAEKSIS 539 (591)
Q Consensus 465 ~~~~al~~~P~~~~~~~~~g~~l~~l~~~~e---A~~~~~~Al~l~-p-~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~ 539 (591)
.|++++..++.+.++.|+.|.+|.+-+.+.+ ++..++..++-+ | ..-+.+|++|...|++|+|++|....+..++
T Consensus 23 ~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~ 102 (126)
T 1nzn_A 23 KFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQ 102 (126)
T ss_dssp HHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 5788888899999999999999999888887 999999999988 6 7899999999999999999999999999999
Q ss_pred ccccHH-HHHHHHHH
Q 007721 540 IERTFE-AFFLKAYI 553 (591)
Q Consensus 540 l~~~~~-~~~~~~~~ 553 (591)
++|++. |--||..+
T Consensus 103 ~eP~n~QA~~Lk~~i 117 (126)
T 1nzn_A 103 TEPQNNQAKELERLI 117 (126)
T ss_dssp HCTTCHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHH
Confidence 999886 88887654
No 251
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.74 E-value=0.0001 Score=78.73 Aligned_cols=114 Identities=14% Similarity=0.015 Sum_probs=84.2
Q ss_pred HHHHHhCCHHHHHHHHHHHHhcC-----CC-h---HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHH
Q 007721 360 VAKMEEGQIRAAISEIDRIIVFK-----LS-V---DCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHL 430 (591)
Q Consensus 360 ~~l~~l~~~~eAl~~~~~al~l~-----p~-~---~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~ 430 (591)
.-+..+|++++|++.+++++++. |+ + ..+.+.|.+|..+|+|++|+..+++++++.-.. +|
T Consensus 295 e~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~---lg------- 364 (429)
T 3qwp_A 295 EELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIF---FP------- 364 (429)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH---SC-------
T ss_pred HHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHH---cC-------
Confidence 34557899999999999999863 32 3 346778899999999999999999999754211 00
Q ss_pred HHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhc----
Q 007721 431 VKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNH---- 506 (591)
Q Consensus 431 ~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l---- 506 (591)
...|.-+..++++|.++..+|++++|+..|++|+++
T Consensus 365 ----------------------------------------~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~ 404 (429)
T 3qwp_A 365 ----------------------------------------GSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVT 404 (429)
T ss_dssp ----------------------------------------SSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------CCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 012334556899999999999999999999999975
Q ss_pred -CCch---HHHHHhHHHHHHH
Q 007721 507 -SSSE---HERLVYEGWILYD 523 (591)
Q Consensus 507 -~p~~---~~a~~~~G~~l~~ 523 (591)
-|++ .+.+.+++.++..
T Consensus 405 lG~~Hp~~~~~~~~l~~~~~e 425 (429)
T 3qwp_A 405 HGREHSLIEDLILLLEECDAN 425 (429)
T ss_dssp TCTTSHHHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHH
Confidence 3444 4444555555543
No 252
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=97.71 E-value=7.8e-05 Score=70.35 Aligned_cols=93 Identities=10% Similarity=0.001 Sum_probs=74.6
Q ss_pred eEEEEcCeEEEhhHHHHhhcC-HHHHHhhcCCC--C--CCCCceeEecCCCCCHHHHHHHHHHHhcCCCCCCChh-HHHH
Q 007721 57 VTFCVRDKEISFVRNKIASLS-SPFKAMLYGGF--V--ESKRKTIDFSHDGVSVEGLRAVEVYTRTSRVDLFCPG-IVLE 130 (591)
Q Consensus 57 V~f~v~g~~~~aHr~iLaa~S-~yF~amf~~~~--~--Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~~~~~~~~-~v~~ 130 (591)
|+|.|||..|...+..|.... .+|..||.+.. . ....+++-| +-+|..|+.||+|+.||++. ++.+ ....
T Consensus 14 V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI---DRDP~~F~~ILnyLRtG~L~-lP~~~~~~~ 89 (202)
T 3drx_A 14 VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI---DRDPTYFGPVLNYLRHGKLV-INKDLAEEG 89 (202)
T ss_dssp EEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE---CSCSTTHHHHHHHHHHSCCC-CCTTSCHHH
T ss_pred EEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe---cCChHHHHHHHHHhcCCccC-CCCCCCHHH
Confidence 999999999999999998664 37899998652 1 123457777 67899999999999999998 5443 3467
Q ss_pred HHHHHhhhChHHHHHHHHHHHHh
Q 007721 131 LLSFANRFCCEEMKSACDAHLAS 153 (591)
Q Consensus 131 lL~~A~~~~i~~L~~~C~~~L~~ 153 (591)
++.-|.+|+|+.|.+.|.+.|..
T Consensus 90 l~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 90 VLEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCcHHHHHHHHHHHHH
Confidence 88999999999999999888764
No 253
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.39 E-value=0.00096 Score=58.27 Aligned_cols=98 Identities=13% Similarity=0.027 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHH---HHHHHHHHHhcC-C-C-hHHHHHHHHHHHHcCCHHHHHHHH
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRA---AISEIDRIIVFK-L-S-VDCLELRAWLFIAADDYESALRDT 408 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~e---Al~~~~~al~l~-p-~-~~~~~~r~~~~~~~g~~~~A~~d~ 408 (591)
......|+++...++....+-++.|.++...++..+ +|.-+...+.-+ | . -+++|.+|..+.++|+|+.|++.+
T Consensus 18 ~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~ 97 (126)
T 1nzn_A 18 LKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYV 97 (126)
T ss_dssp HHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 344556788888889999999999999999888777 999999999877 6 2 578899999999999999999999
Q ss_pred HHHHhcCCcchhhhhhchHhHHHHHHHhhh
Q 007721 409 LALLALESNYMMFHGRVSGDHLVKLLNHHV 438 (591)
Q Consensus 409 ~~al~l~P~~~~~~~~~~~~~~~~~l~~~~ 438 (591)
+.+|+.+|++ ..|..+...+...+
T Consensus 98 ~~lL~~eP~n------~QA~~Lk~~i~~~i 121 (126)
T 1nzn_A 98 RGLLQTEPQN------NQAKELERLIDKAM 121 (126)
T ss_dssp HHHHHHCTTC------HHHHHHHHHHHHHH
T ss_pred HHHHHhCCCC------HHHHHHHHHHHHHH
Confidence 9999999987 55666666655443
No 254
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.76 E-value=0.012 Score=52.25 Aligned_cols=91 Identities=18% Similarity=0.164 Sum_probs=75.9
Q ss_pred HHHHHHHHHc---CCCCchhHhhhHHHHHHhCCHH---HHHHHHHHHHhcCC-chHHHHHhHHHHHHHcCCHHHHHHHHH
Q 007721 463 LAVINQMLIN---DPGKSFLRFRQSLLLLRLNCQK---AAMRCLRLARNHSS-SEHERLVYEGWILYDTGHREEALSRAE 535 (591)
Q Consensus 463 l~~~~~al~~---~P~~~~~~~~~g~~l~~l~~~~---eA~~~~~~Al~l~p-~~~~a~~~~G~~l~~~g~~eeAl~~~e 535 (591)
|..+++--.. ++-++...|+.|.+|.+-+..+ +++..++..++-.| +.-+-+|+++..+|++|+|++|...-+
T Consensus 22 L~~lr~qY~~E~~~~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d 101 (144)
T 1y8m_A 22 LEILRQQVVSEGGPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVD 101 (144)
T ss_dssp HHHHHHHHHHTTSTTSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 4444444432 3678899999999999977655 79999999999998 688999999999999999999999999
Q ss_pred HhhcccccHH-HHHHHHHH
Q 007721 536 KSISIERTFE-AFFLKAYI 553 (591)
Q Consensus 536 ~ai~l~~~~~-~~~~~~~~ 553 (591)
..++++|++. |--||..+
T Consensus 102 ~lL~~eP~n~QA~~Lk~~I 120 (144)
T 1y8m_A 102 TLFEHERNNKQVGALKSMV 120 (144)
T ss_dssp HHHHTCCCCHHHHHHHHHH
T ss_pred HHHhcCCCcHHHHHHHHHH
Confidence 9999999987 77776544
No 255
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=96.62 E-value=0.0015 Score=56.26 Aligned_cols=84 Identities=7% Similarity=0.033 Sum_probs=65.1
Q ss_pred eEEEEcCeEEEhhHHHHhhcCH-HHHHhhcCCC-CCCCCceeEecCCCCCHHHHHHHHHHHhcCCCCCCChh-HHHHHHH
Q 007721 57 VTFCVRDKEISFVRNKIASLSS-PFKAMLYGGF-VESKRKTIDFSHDGVSVEGLRAVEVYTRTSRVDLFCPG-IVLELLS 133 (591)
Q Consensus 57 V~f~v~g~~~~aHr~iLaa~S~-yF~amf~~~~-~Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~~~~~~~~-~v~~lL~ 133 (591)
|++.|||..|...+..|..... .+.+|+++.. .....+++-| +-+|..|+.||+|+.||++. ++.+ .+..++.
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi---DRdp~~F~~ILnylR~G~l~-~p~~~~~~~~~~ 82 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF---DRHPGVFAQIINYYRSGKLH-YPTDVCGPLFEE 82 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE---CSCTTTHHHHHHHHHHSCBC-CCSSSCHHHHHH
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE---ecChHHHHHHHHHhcCCCCC-CCCcccHHHHHH
Confidence 9999999999999999986633 3456665432 1223457877 67899999999999999997 4443 4678999
Q ss_pred HHhhhChHHHH
Q 007721 134 FANRFCCEEMK 144 (591)
Q Consensus 134 ~A~~~~i~~L~ 144 (591)
-|.+|+|+...
T Consensus 83 Ea~fy~i~~~~ 93 (115)
T 3kvt_A 83 ELEFWGLDSNQ 93 (115)
T ss_dssp HHHHHTCCGGG
T ss_pred HHHHhCCChHH
Confidence 99999998764
No 256
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.62 E-value=0.0062 Score=53.40 Aligned_cols=79 Identities=18% Similarity=0.124 Sum_probs=69.4
Q ss_pred CCchhHhhhHHHHHHhCCH---HHHHHHHHHHHhcCC-chHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH-HHHH
Q 007721 475 GKSFLRFRQSLLLLRLNCQ---KAAMRCLRLARNHSS-SEHERLVYEGWILYDTGHREEALSRAEKSISIERTFE-AFFL 549 (591)
Q Consensus 475 ~~~~~~~~~g~~l~~l~~~---~eA~~~~~~Al~l~p-~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~-~~~~ 549 (591)
-++...|+.|.+|.+-... ..++..++..++..| ..-|-+++++...|++|+|++|...-++.++++|++. |--|
T Consensus 38 vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~L 117 (134)
T 3o48_A 38 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGAL 117 (134)
T ss_dssp SCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHH
T ss_pred CChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHH
Confidence 3568899999999997765 469999999999999 5689999999999999999999999999999999998 6666
Q ss_pred HHHH
Q 007721 550 KAYI 553 (591)
Q Consensus 550 ~~~~ 553 (591)
|..+
T Consensus 118 k~~I 121 (134)
T 3o48_A 118 KSMV 121 (134)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 257
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.59 E-value=0.066 Score=58.02 Aligned_cols=166 Identities=11% Similarity=-0.002 Sum_probs=117.6
Q ss_pred HHhHHHHHHHhCCHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHc---------CCHHHHHHHHHHHHh--cCCcchhh
Q 007721 355 YKYRAVAKMEEGQIRAAISEIDRIIVF--KLSVDCLELRAWLFIAA---------DDYESALRDTLALLA--LESNYMMF 421 (591)
Q Consensus 355 y~~rg~~l~~l~~~~eAl~~~~~al~l--~p~~~~~~~r~~~~~~~---------g~~~~A~~d~~~al~--l~P~~~~~ 421 (591)
+...-..+.+.|+.++|+..|+++.+- .|+...|...-.++... ++.+.|..-|++..+ +.|+-..|
T Consensus 29 l~~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~ty 108 (501)
T 4g26_A 29 LKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATF 108 (501)
T ss_dssp HHHHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHH
Confidence 455556778899999999999999875 56766665544444433 347889988887665 45764322
Q ss_pred hhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccc-hHHHHHHHHHcC-CCCchhHhhhHHHHHHhCCHHHHHHH
Q 007721 422 HGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIG-SLAVINQMLIND-PGKSFLRFRQSLLLLRLNCQKAAMRC 499 (591)
Q Consensus 422 ~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~-al~~~~~al~~~-P~~~~~~~~~g~~l~~l~~~~eA~~~ 499 (591)
.. +...+...++.+ |+.++++|.+.. +-+...|+.+=..+.+.|+.++|++.
T Consensus 109 n~--------------------------lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l 162 (501)
T 4g26_A 109 TN--------------------------GARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEV 162 (501)
T ss_dssp HH--------------------------HHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HH--------------------------HHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHH
Confidence 11 111111123333 477888888763 22567788888889999999999999
Q ss_pred HHHHHhc--CCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhc--ccccHHHH
Q 007721 500 LRLARNH--SSSEHERLVYEGWILYDTGHREEALSRAEKSIS--IERTFEAF 547 (591)
Q Consensus 500 ~~~Al~l--~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~--l~~~~~~~ 547 (591)
++...+. .|+ ...+..+=.++.+.|+.++|.+.+++--+ ++||-..|
T Consensus 163 ~~~M~~~G~~Pd-~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps~~T~ 213 (501)
T 4g26_A 163 DAHMVESEVVPE-EPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVSKSTF 213 (501)
T ss_dssp HHHHHHTTCCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBCHHHH
T ss_pred HHHHHhcCCCCC-HHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcCHHHH
Confidence 9987764 565 44777777889999999999999998765 57887765
No 258
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=96.57 E-value=0.0029 Score=56.40 Aligned_cols=84 Identities=13% Similarity=0.112 Sum_probs=64.5
Q ss_pred eEEEEcCeEEEhhHHHHhhcCHHHHHhhcCCCC----CCCCceeEecCCCCCHHHHHHHHHHHhcCCCCCCChh-HHHHH
Q 007721 57 VTFCVRDKEISFVRNKIASLSSPFKAMLYGGFV----ESKRKTIDFSHDGVSVEGLRAVEVYTRTSRVDLFCPG-IVLEL 131 (591)
Q Consensus 57 V~f~v~g~~~~aHr~iLaa~S~yF~amf~~~~~----Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~~~~~~~~-~v~~l 131 (591)
|++.|||..|...+..|.... .+||....+ ....+++-| +=++..|+.||+|+.||++. ++.+ .+..+
T Consensus 37 V~LNVGG~~F~T~~~TL~~~P---~S~L~~~~~~~~~~~~~g~yFi---DRdp~~F~~ILnflR~G~l~-~p~~~~~~~l 109 (140)
T 2nz0_B 37 IVLNVSGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF---DRDPEVFRCVLNFYRTGKLH-YPRYECISAY 109 (140)
T ss_dssp EEEEETTEEEEEEHHHHHTCT---TSTTTSGGGGGSEETTTTEEEE---CSCHHHHHHHHHHHHHSSBC-CCTTSCHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCC---CeeecccCCcccccCCCCeEEE---eCCcHHHHHHHHHHhcCCcC-CCCCcCHHHH
Confidence 999999999999999997532 346654211 123457888 66999999999999999998 5443 47889
Q ss_pred HHHHhhhChHHHH-HHH
Q 007721 132 LSFANRFCCEEMK-SAC 147 (591)
Q Consensus 132 L~~A~~~~i~~L~-~~C 147 (591)
+.=|++|+|+.+. ..|
T Consensus 110 ~eEa~fy~i~~l~l~~C 126 (140)
T 2nz0_B 110 DDELAFYGILPEIIGDC 126 (140)
T ss_dssp HHHHHHHTCCGGGBCTT
T ss_pred HHHHHHcCCChHHHHHH
Confidence 9999999998873 444
No 259
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=96.40 E-value=0.0032 Score=54.96 Aligned_cols=84 Identities=13% Similarity=0.120 Sum_probs=64.4
Q ss_pred eEEEEcCeEEEhhHHHHhhcCHHHHHhhcCCC----CCCCCceeEecCCCCCHHHHHHHHHHHhcCCCCCCChh-HHHHH
Q 007721 57 VTFCVRDKEISFVRNKIASLSSPFKAMLYGGF----VESKRKTIDFSHDGVSVEGLRAVEVYTRTSRVDLFCPG-IVLEL 131 (591)
Q Consensus 57 V~f~v~g~~~~aHr~iLaa~S~yF~amf~~~~----~Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~~~~~~~~-~v~~l 131 (591)
|++.|||..|..-+..|.... .+||.... .....+++-| +=++..|+.||+|+.||++. ++.+ .+..+
T Consensus 15 V~LNVGG~~F~t~~~TL~~~p---~S~L~~~~~~~~~~~~~g~~Fi---DRdp~~F~~ILnflR~G~l~-~p~~~~~~~l 87 (124)
T 1s1g_A 15 IVLNVSGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF---DRDPEVFRCVLNFYRTGKLH-YPRYECISAY 87 (124)
T ss_dssp EEEEETTEEEEEEHHHHTTST---TSSTTSSGGGGTBCSSSCSEEE---CSCHHHHHHHHHHHHHSCBC-CCTTSCHHHH
T ss_pred EEEEeCCEEEEEeHHHHhcCC---CceecccCCcccccCCCCcEEE---cCChHHHHHHHHHHhcCCCC-CCCCcCHHHH
Confidence 999999999999999997542 34554411 1123457777 66999999999999999998 5543 47889
Q ss_pred HHHHhhhChHHHH-HHH
Q 007721 132 LSFANRFCCEEMK-SAC 147 (591)
Q Consensus 132 L~~A~~~~i~~L~-~~C 147 (591)
+.-|.+|+|+.+. ..|
T Consensus 88 ~~Ea~fy~i~~l~l~~c 104 (124)
T 1s1g_A 88 DDELAFYGILPEIIGDC 104 (124)
T ss_dssp HHHHHHTTCCGGGBCHH
T ss_pred HHHHHHcCCChHHHHHH
Confidence 9999999999873 444
No 260
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.20 E-value=0.033 Score=48.81 Aligned_cols=83 Identities=16% Similarity=0.098 Sum_probs=68.3
Q ss_pred ChHHHHhHHHHHHHhCCH---HHHHHHHHHHHhcCCC--hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhc
Q 007721 351 LSFPYKYRAVAKMEEGQI---RAAISEIDRIIVFKLS--VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRV 425 (591)
Q Consensus 351 ~~~ay~~rg~~l~~l~~~---~eAl~~~~~al~l~p~--~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~ 425 (591)
.+.+-++.|-++..-++. .++|..+...++-.|. -++++.++..+.++|+|+.|++..+++++.+|++ .
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N------~ 112 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNN------K 112 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTC------H
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCC------H
Confidence 567788888888876654 5799999999988884 5889999999999999999999999999999988 5
Q ss_pred hHhHHHHHHHhhhc
Q 007721 426 SGDHLVKLLNHHVR 439 (591)
Q Consensus 426 ~~~~~~~~l~~~~~ 439 (591)
.|..+...++..+.
T Consensus 113 QA~~Lk~~Ie~ki~ 126 (134)
T 3o48_A 113 QVGALKSMVEDKIQ 126 (134)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 66666666655443
No 261
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.16 E-value=0.083 Score=46.83 Aligned_cols=85 Identities=15% Similarity=0.090 Sum_probs=71.5
Q ss_pred CCCChHHHHhHHHHHHHhCCH---HHHHHHHHHHHhcCCC--hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhh
Q 007721 348 DPTLSFPYKYRAVAKMEEGQI---RAAISEIDRIIVFKLS--VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFH 422 (591)
Q Consensus 348 dP~~~~ay~~rg~~l~~l~~~---~eAl~~~~~al~l~p~--~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~ 422 (591)
++-...+-++.|-++..-++. .++|.-+...+.-.|. -+++|.++..+.++|+|++|.+..++.|+.+|++
T Consensus 35 ~~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n---- 110 (144)
T 1y8m_A 35 PTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNN---- 110 (144)
T ss_dssp TTSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCC----
T ss_pred CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCc----
Confidence 456788999999999987664 4799999999998884 5889999999999999999999999999999988
Q ss_pred hhchHhHHHHHHHhhh
Q 007721 423 GRVSGDHLVKLLNHHV 438 (591)
Q Consensus 423 ~~~~~~~~~~~l~~~~ 438 (591)
..|..+...+....
T Consensus 111 --~QA~~Lk~~Ie~~i 124 (144)
T 1y8m_A 111 --KQVGALKSMVEDKI 124 (144)
T ss_dssp --HHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHH
Confidence 56666666665544
No 262
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=96.10 E-value=0.0032 Score=52.78 Aligned_cols=86 Identities=9% Similarity=-0.008 Sum_probs=62.4
Q ss_pred eEEEEcCeEEEhhHHHHhhcCHHHHHhhcCCC-----CCCCCceeEecCCCCCHHHHHHHHHHHhc-CCCCCCChhHHHH
Q 007721 57 VTFCVRDKEISFVRNKIASLSSPFKAMLYGGF-----VESKRKTIDFSHDGVSVEGLRAVEVYTRT-SRVDLFCPGIVLE 130 (591)
Q Consensus 57 V~f~v~g~~~~aHr~iLaa~S~yF~amf~~~~-----~Es~~~~I~l~~~~vs~~~~~~ll~ylYt-g~~~~~~~~~v~~ 130 (591)
|++.|||..|...+..|... -.+||..-+ .....+++-| +-+|..|+.||+|+.| |++.....-.+..
T Consensus 3 v~LNVGG~~f~t~~~TL~~~---p~s~L~~~~~~~~~~~~~~~eyFi---DRdp~~F~~ILnflR~~G~l~~p~~~~~~~ 76 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQF---PDTLLGNPQKRNRYYDPLRNEYFF---DRNRPSFDAILYFYQSGGRLRRPVNVPLDV 76 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTS---TTSTTTCHHHHGGGEETTTTEEEE---CSCSTTHHHHHHHHHTTSCCCCCTTSCHHH
T ss_pred EEEEECCEEEEeeHHHHhcC---CCccccchhccccccCCCceeEEE---cCChHHHHHHHHHHhcCCcccCCCCCCHHH
Confidence 88999999999999999643 233333211 1123457888 6689999999999999 8987323335788
Q ss_pred HHHHHhhhChHHHH-HHHH
Q 007721 131 LLSFANRFCCEEMK-SACD 148 (591)
Q Consensus 131 lL~~A~~~~i~~L~-~~C~ 148 (591)
++.-|.+|+|+.+. +.|.
T Consensus 77 ~~~Ea~fy~i~~~~~~~~~ 95 (100)
T 1t1d_A 77 FSEEIKFYELGENAFERYR 95 (100)
T ss_dssp HHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHH
Confidence 99999999997754 4443
No 263
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=96.02 E-value=0.0023 Score=54.18 Aligned_cols=85 Identities=9% Similarity=0.083 Sum_probs=64.0
Q ss_pred eEEEEcCeEEEhhHHHHhhcCHHHHHhhcCCCC----CCCCceeEecCCCCCHHHHHHHHHHHhcCCCCCCChh-HHHHH
Q 007721 57 VTFCVRDKEISFVRNKIASLSSPFKAMLYGGFV----ESKRKTIDFSHDGVSVEGLRAVEVYTRTSRVDLFCPG-IVLEL 131 (591)
Q Consensus 57 V~f~v~g~~~~aHr~iLaa~S~yF~amf~~~~~----Es~~~~I~l~~~~vs~~~~~~ll~ylYtg~~~~~~~~-~v~~l 131 (591)
|++.|||..|...+..|.... .+||....+ ....+++-| +=+|..|+.||+|+.||++. ++.+ .+..+
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p---~s~L~~~~~~~~~~~~~~~~Fi---DRdp~~F~~ILnflR~g~l~-~p~~~~~~~l 74 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYP---DTLLGSSERDFFYHPETQQYFF---DRDPDIFRHILNFYRTGKLH-YPRHECISAY 74 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSC---SSSTTSGGGGGGEEGGGTEEEE---CSCTTTHHHHHHHHHHSCBC-CCTTSCHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCC---CccccccCCcccccCCCCcEEE---eCCcHHHHHHHHHHhcCCCC-CCCCcCHHHH
Confidence 789999999999999997543 245554211 113457777 56899999999999999988 5443 47889
Q ss_pred HHHHhhhChHHHH-HHHH
Q 007721 132 LSFANRFCCEEMK-SACD 148 (591)
Q Consensus 132 L~~A~~~~i~~L~-~~C~ 148 (591)
+.-|.+|+|+.+. ..|+
T Consensus 75 ~~Ea~fy~i~~l~~~~cc 92 (105)
T 1nn7_A 75 DEELAFFGLIPEIIGDCC 92 (105)
T ss_dssp HHHHHHHTCCSCCBCHHH
T ss_pred HHHHHHcCCCHHHHHHHH
Confidence 9999999998873 4444
No 264
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.00 E-value=0.37 Score=52.06 Aligned_cols=157 Identities=8% Similarity=0.009 Sum_probs=106.0
Q ss_pred hhhHHhhhccHHHHHHHHHHHhhccc---cchhhhhHHHHHHh---------CChHHHHHHHHHHHHhc-CCCHHHHHHH
Q 007721 262 LGCVMFEREEYKDACYYFEAAADAGH---IYSLAGLARAKYKV---------GQQYSAYKLINSIISEH-KPTGWMYQER 328 (591)
Q Consensus 262 lG~~~~~~g~~~eA~~~f~~Al~~~~---~~a~~~la~~~~~~---------G~~~~A~~~~~~aI~~~-~~~g~a~~~r 328 (591)
+-..+.+.|++++|.+.|+.+.+.+- ...+..+-.++... |..+.|...|.+..... .+....|...
T Consensus 32 ~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~tyn~l 111 (501)
T 4g26_A 32 KLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATFTNG 111 (501)
T ss_dssp HHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 33456677888888888887776532 12222222222222 22466777777776543 2232233221
Q ss_pred ----HhcCCcHHHHHHHHHHHHc--CCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHcCC
Q 007721 329 ----SLYNLGREKIVDLNYASEL--DPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVF--KLSVDCLELRAWLFIAADD 400 (591)
Q Consensus 329 ----~~y~~~~eA~~dl~~Ai~L--dP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l--~p~~~~~~~r~~~~~~~g~ 400 (591)
+..+..++|...|++..+. .| +...|..+-..+.+.|+.++|...|+++.+- .|+...|...-.++.+.|+
T Consensus 112 I~~~~~~g~~~~A~~l~~~M~~~g~~P-d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~~g~ 190 (501)
T 4g26_A 112 ARLAVAKDDPEMAFDMVKQMKAFGIQP-RLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMDTKN 190 (501)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHhcCCHHHHHHHHHHHHHcCCCC-ccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhCCC
Confidence 2233448888888877664 45 5778999999999999999999999999875 5677777777788999999
Q ss_pred HHHHHHHHHHHHh--cCCcch
Q 007721 401 YESALRDTLALLA--LESNYM 419 (591)
Q Consensus 401 ~~~A~~d~~~al~--l~P~~~ 419 (591)
.++|.+.+++..+ +.|+-.
T Consensus 191 ~d~A~~ll~~Mr~~g~~ps~~ 211 (501)
T 4g26_A 191 ADKVYKTLQRLRDLVRQVSKS 211 (501)
T ss_dssp HHHHHHHHHHHHHHTSSBCHH
T ss_pred HHHHHHHHHHHHHhCCCcCHH
Confidence 9999999998766 567643
No 265
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=95.27 E-value=0.43 Score=49.76 Aligned_cols=76 Identities=12% Similarity=-0.020 Sum_probs=62.9
Q ss_pred hhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhh-------cccccHHHHHHHHHH
Q 007721 481 FRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSI-------SIERTFEAFFLKAYI 553 (591)
Q Consensus 481 ~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai-------~l~~~~~~~~~~~~~ 553 (591)
..++.++..+|++++|+..++++++.+|-+-.++..+=.+|+..|+..+|++.|++.- .+.|+-+---+-.-.
T Consensus 175 ~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~~l~~l~~~i 254 (388)
T 2ff4_A 175 TAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTLRALNERI 254 (388)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 3467788899999999999999999999999999999999999999999999998864 467888743333334
Q ss_pred hhh
Q 007721 554 LAD 556 (591)
Q Consensus 554 ~~~ 556 (591)
|..
T Consensus 255 l~~ 257 (388)
T 2ff4_A 255 LRQ 257 (388)
T ss_dssp HTT
T ss_pred HcC
Confidence 433
No 266
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=95.23 E-value=4.8 Score=44.50 Aligned_cols=238 Identities=14% Similarity=0.036 Sum_probs=134.2
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHhcCCc---HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCC-
Q 007721 308 YKLINSIISEHKPTGWMYQERSLYNLG---REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKL- 383 (591)
Q Consensus 308 ~~~~~~aI~~~~~~g~a~~~r~~y~~~---~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p- 383 (591)
...+...|..+|+.+.+-.-|..+... .+.+.+|-....-.|.....-.+.+.++...|+-.+|.+...++..-..
T Consensus 55 ~~ev~~Fl~~~~~~p~~~~Lr~~~l~~l~~~~~w~~~l~~~~~~p~~~~~~c~~~~A~~~~G~~~~a~~~~~~lW~~~~~ 134 (618)
T 1qsa_A 55 AVTVTNFVRANPTLPPARTLQSRFVNELARREDWRGLLAFSPEKPGTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTGKS 134 (618)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHCCSCCSSHHHHHHHHHHHHHTTCHHHHHHHHHHHHSCSSC
T ss_pred HHHHHHHHHHCCCChhHHHHHHHHHHHHHhCCCHHHHHHhccCCCCCHHHHHHHHHHHHHcCChhHHHHHHHHHHhCCCC
Confidence 346677788888877776655443110 1123333332222367778888888889999998888888877765432
Q ss_pred --Ch----------------HHHHHHHHHHHHcCCHHHHHHHHHH-------------HHhcCCcchhhhhh----ch--
Q 007721 384 --SV----------------DCLELRAWLFIAADDYESALRDTLA-------------LLALESNYMMFHGR----VS-- 426 (591)
Q Consensus 384 --~~----------------~~~~~r~~~~~~~g~~~~A~~d~~~-------------al~l~P~~~~~~~~----~~-- 426 (591)
+. +.+..|.......|+...|...... ++.-+|........ ..
T Consensus 135 ~p~~c~~l~~~~~~~g~lt~~~~~~R~~~al~~~~~~~a~~l~~~l~~~~~~~a~~~~al~~~p~~~~~~~~~~~~~~~~ 214 (618)
T 1qsa_A 135 QPNACDKLFSVWRASGKQDPLAYLERIRLAMKAGNTGLVTVLAGQMPADYQTIASAIISLANNPNTVLTFARTTGATDFT 214 (618)
T ss_dssp CCTHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTTCHHHHHHHHHTCCGGGHHHHHHHHHHHHCGGGHHHHHHHSCCCHHH
T ss_pred CcHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhChHhHHHHHhccCCChhh
Confidence 21 1122233445556666665544332 22334433221100 00
Q ss_pred -HhHHHHHHHhhhcccCchhhhh-------------------hhhhcccccc-ccchHHHHHHHHHcCCCCchhHhhhHH
Q 007721 427 -GDHLVKLLNHHVRSWSPADCWI-------------------KLYDRWSSVD-DIGSLAVINQMLINDPGKSFLRFRQSL 485 (591)
Q Consensus 427 -~~~~~~~l~~~~~~~~~a~~~~-------------------~l~~~~~~~~-~~~al~~~~~al~~~P~~~~~~~~~g~ 485 (591)
........+...++.+.|..+. .+.-.....+ +.++...++++....+......+..+.
T Consensus 215 ~~~~~~~~~rlar~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~r~ 294 (618)
T 1qsa_A 215 RQMAAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRM 294 (618)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHHHHHHHHH
Confidence 0000011111111222221111 1111111123 444666777777655554444445555
Q ss_pred HHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHHHH
Q 007721 486 LLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFEAF 547 (591)
Q Consensus 486 ~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~~~ 547 (591)
+| +.|+++.|...+++.-.-.++...+.|.+|-.+..+|+-++|-..|+++.. .++|=.+
T Consensus 295 Al-r~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~-~~~fYg~ 354 (618)
T 1qsa_A 295 AL-GTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ-QRGFYPM 354 (618)
T ss_dssp HH-HHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT-SCSHHHH
T ss_pred HH-HCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc-CCChHHH
Confidence 54 779999999999876664456688899999999999999999999999987 5676443
No 267
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=95.22 E-value=0.13 Score=50.61 Aligned_cols=129 Identities=12% Similarity=0.037 Sum_probs=85.6
Q ss_pred HHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhh
Q 007721 360 VAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHV 438 (591)
Q Consensus 360 ~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~ 438 (591)
..+.+.|+.++|++.....|+-+|. .+.-.....++.-.|+|+.|+.-++.+.+++|++.+ .+...+.+++..+
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~-----~a~~yr~lI~aE~ 79 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLP-----GASQLRHLVKAAQ 79 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHH-----HHHHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhH-----HHHHHHHHHHHHH
Confidence 3567789999999999999999995 565556778899999999999999999999999842 2222233333222
Q ss_pred cccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchH
Q 007721 439 RSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEH 511 (591)
Q Consensus 439 ~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~ 511 (591)
.+.+-. .-...-.-+ -+|..-....-+++.....|+.++|.+.-.+|++..|..+
T Consensus 80 ~R~~vf-------aG~~~P~~~-----------g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ap~~~ 134 (273)
T 1zbp_A 80 ARKDFA-------QGAATAKVL-----------GENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEKG 134 (273)
T ss_dssp HHHHHT-------TSCCCEECC-----------CSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCC
T ss_pred HHHHHH-------cCCCCCCCC-----------CCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhcCcccC
Confidence 221111 000000101 0122222334466777888999999999999999988754
No 268
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=94.99 E-value=0.18 Score=45.07 Aligned_cols=115 Identities=7% Similarity=-0.086 Sum_probs=70.9
Q ss_pred CC-ChHHHHHHHHHHHHcCCH------HHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhhhhhhhcc
Q 007721 382 KL-SVDCLELRAWLFIAADDY------ESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRW 454 (591)
Q Consensus 382 ~p-~~~~~~~r~~~~~~~g~~------~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~ 454 (591)
.| +++.|..-.....+.|+. +.-+..|++|++--|-... ..|...-..--.|-.|
T Consensus 9 ~p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~------------------~~wrrYI~LWIrYA~~ 70 (161)
T 4h7y_A 9 MANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKY------------------GQNESFARIQVRFAEL 70 (161)
T ss_dssp -CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGG------------------TTCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCcccc------------------ccHHHHHHHHHHHHHH
Confidence 55 366665544455555666 6666777777776654211 1111111100111111
Q ss_pred ccccccc-hHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHH
Q 007721 455 SSVDDIG-SLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERL 514 (591)
Q Consensus 455 ~~~~~~~-al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~ 514 (591)
....|.+ +-.+|+.|+.+....+..|...|..-.+.|....|...+.+|+.+.|...+.+
T Consensus 71 ~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~l 131 (161)
T 4h7y_A 71 KAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEML 131 (161)
T ss_dssp HHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHHH
T ss_pred HHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHHH
Confidence 1112222 47788888888888888888888888999999999999999999998876553
No 269
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=94.45 E-value=0.15 Score=46.36 Aligned_cols=59 Identities=14% Similarity=0.063 Sum_probs=48.3
Q ss_pred HHHHhHHHHHHHhCCHHHHHHHHHHHHhcCC------C--------------------hHHHHHHHHHHHHcCCHHHHHH
Q 007721 353 FPYKYRAVAKMEEGQIRAAISEIDRIIVFKL------S--------------------VDCLELRAWLFIAADDYESALR 406 (591)
Q Consensus 353 ~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p------~--------------------~~~~~~r~~~~~~~g~~~~A~~ 406 (591)
..+.++|.++...|+|..|...|++||.+.- + .+.-+..+.|+.++|++++|+.
T Consensus 64 ~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~ 143 (167)
T 3ffl_A 64 QLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIA 143 (167)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHH
Confidence 4788999999999999999999999987721 1 1334556789999999999999
Q ss_pred HHHHH
Q 007721 407 DTLAL 411 (591)
Q Consensus 407 d~~~a 411 (591)
-.+.+
T Consensus 144 ~Le~I 148 (167)
T 3ffl_A 144 ILDGI 148 (167)
T ss_dssp HHHTS
T ss_pred HHhcC
Confidence 88774
No 270
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=93.28 E-value=0.11 Score=47.40 Aligned_cols=68 Identities=15% Similarity=0.116 Sum_probs=57.7
Q ss_pred CCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHH---------HHHhHHHHHHHcCCHHHHHHHHHHhhcccc
Q 007721 475 GKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHE---------RLVYEGWILYDTGHREEALSRAEKSISIER 542 (591)
Q Consensus 475 ~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~---------a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~ 542 (591)
+.-.+++.+...+...|.++-|+..+..++.+..++.+ ++++.|..+|.+|+|..|...|++|+.+..
T Consensus 18 ~~~~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k 94 (167)
T 3ffl_A 18 GSHMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKK 94 (167)
T ss_dssp ---CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH
Confidence 34556778888899999999999999998888766666 899999999999999999999999987644
No 271
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=93.20 E-value=1 Score=46.83 Aligned_cols=99 Identities=13% Similarity=0.077 Sum_probs=69.0
Q ss_pred HHhCChHHHHHHHHHHHHhcCC--------CHHHHHHHHhcCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHH
Q 007721 299 YKVGQQYSAYKLINSIISEHKP--------TGWMYQERSLYNLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRA 370 (591)
Q Consensus 299 ~~~G~~~~A~~~~~~aI~~~~~--------~g~a~~~r~~y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~e 370 (591)
...|+...|...+.+++.++.. ..|+...+..+ ++ ....+...++.++..+|++.+
T Consensus 126 ~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l---~~-------------~~~~a~~~~~~~~l~~g~~~~ 189 (388)
T 2ff4_A 126 AAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATAL---VE-------------DKVLAHTAKAEAEIACGRASA 189 (388)
T ss_dssp HHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHH---HH-------------HHHHHHHHHHHHHHHTTCHHH
T ss_pred HhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHH---HH-------------HHHHHHHHHHHHHHHCCCHHH
Confidence 3456777777788888777632 11222222111 11 112344567888999999999
Q ss_pred HHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 007721 371 AISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLA 413 (591)
Q Consensus 371 Al~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~ 413 (591)
|+..+.++++.+|- -..+..+-.++...|+..+|++.|++.-+
T Consensus 190 a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 190 VIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999999999995 45555566789999999999999988754
No 272
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=92.53 E-value=4.6 Score=44.63 Aligned_cols=234 Identities=12% Similarity=0.032 Sum_probs=137.1
Q ss_pred HHHHhCChHHHHHHHHHHHHhcC-CCHHHHHHH-----HhcCC--cHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCH
Q 007721 297 AKYKVGQQYSAYKLINSIISEHK-PTGWMYQER-----SLYNL--GREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQI 368 (591)
Q Consensus 297 ~~~~~G~~~~A~~~~~~aI~~~~-~~g~a~~~r-----~~y~~--~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~ 368 (591)
......+.+.|...+........ +.......+ ..... ..++..-+.++..-.++....-...+.+ +..|++
T Consensus 223 ~rlar~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~r~A-lr~~d~ 301 (618)
T 1qsa_A 223 ASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMA-LGTGDR 301 (618)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHHHHHHHHHH-HHHTCH
T ss_pred HHHHhcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHHHHHHHHHH-HHCCCH
Confidence 34445577778877777654332 111111111 11111 2456666666655444333322223344 467999
Q ss_pred HHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHHHHHHHhhhcccCchhhh
Q 007721 369 RAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHLVKLLNHHVRSWSPADCW 447 (591)
Q Consensus 369 ~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~ 447 (591)
+.|...|+++-.-.++ +...|-+|.++.++|+-++|...|+++.+ +. .|||..++..+... ....
T Consensus 302 ~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~--~~--~fYg~lAa~~Lg~~-------~~~~--- 367 (618)
T 1qsa_A 302 RGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ--QR--GFYPMVAAQRIGEE-------YELK--- 367 (618)
T ss_dssp HHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT--SC--SHHHHHHHHHTTCC-------CCCC---
T ss_pred HHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc--CC--ChHHHHHHHHcCCC-------CCCC---
Confidence 9999999876543223 55567788899999999999999999986 32 36776655443210 0000
Q ss_pred hhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCH
Q 007721 448 IKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHR 527 (591)
Q Consensus 448 ~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~ 527 (591)
...+.... ...+..+| -+.++..|..+|...+|.+-.+.+++..+ .+-...++.+....|.+
T Consensus 368 ------~~~~~~~~-----~~~~~~~~-----~~~r~~~L~~~g~~~~a~~ew~~~~~~~~--~~~~~~la~~a~~~~~~ 429 (618)
T 1qsa_A 368 ------IDKAPQNV-----DSALTQGP-----EMARVRELMYWNLDNTARSEWANLVKSKS--KTEQAQLARYAFNNQWW 429 (618)
T ss_dssp ------CCCCCSCC-----CCHHHHSH-----HHHHHHHHHHTTCHHHHHHHHHHHHTTCC--HHHHHHHHHHHHHTTCH
T ss_pred ------CCCCChhH-----HhhhccCh-----HHHHHHHHHHCCChhhHHHHHHHHHhcCC--HHHHHHHHHHHHHCCCh
Confidence 00000000 01112222 35678889999999999998888886533 23345667778888888
Q ss_pred HHHHHHHHHhhccc------c--------------cHHHHHHHHHHhhhcCCCCCc
Q 007721 528 EEALSRAEKSISIE------R--------------TFEAFFLKAYILADTNLDPES 563 (591)
Q Consensus 528 eeAl~~~e~ai~l~------~--------------~~~~~~~~~~~~~~~~~~~~~ 563 (591)
+.++....++-..+ | .....++.|++.-.|+.||..
T Consensus 430 ~~~v~~~~~~~~~~~~~~~~P~~y~~~i~~~a~~~gv~~~ll~Ai~~~ES~f~p~a 485 (618)
T 1qsa_A 430 DLSVQATIAGKLWDHLEERFPLAYNDLFKRYTSGKEIPQSYAMAIARQESAWNPKV 485 (618)
T ss_dssp HHHHHHHHHTTCTTCHHHHSCCTTHHHHHHHHTTSSSCHHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHHHHHhhcchhhhCCcchHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCCC
Confidence 88886665443322 1 122346777888888888754
No 273
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=91.60 E-value=0.81 Score=51.75 Aligned_cols=57 Identities=16% Similarity=-0.025 Sum_probs=45.4
Q ss_pred hhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHH
Q 007721 478 FLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRA 534 (591)
Q Consensus 478 ~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~ 534 (591)
.+..-++.-|...|+++-|+...++|....|++=..++.++.+|..+|+||.|+-..
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtL 394 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAI 394 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHH
Confidence 455567777777888888888888888888888888888888888888888888443
No 274
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=91.58 E-value=2.9 Score=38.07 Aligned_cols=117 Identities=15% Similarity=0.095 Sum_probs=85.9
Q ss_pred HHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHh----cCCcch
Q 007721 345 SELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLA----LESNYM 419 (591)
Q Consensus 345 i~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~----l~P~~~ 419 (591)
-.|-|..++.-+-.+.++.-.|.|..|+-.+. +.+ ....+.-..++..++||..|+...+.+++ -||+-
T Consensus 26 a~L~~~~~eY~lL~~I~LyyngEY~R~Lf~L~-----~lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~- 99 (242)
T 3kae_A 26 ACLLPCKPEYRMLMSIVLYLNGEYTRALFHLH-----KLNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDV- 99 (242)
T ss_dssp HHHC----CTHHHHHHHHHHTTCHHHHHHHHH-----TCCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCC-
T ss_pred HHHccCChHHHhhhhhhhhhcchHhHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccc-
Confidence 34567777888889999999999887775432 344 45567788999999999999999999994 33542
Q ss_pred hhhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhH-hhhHHHHHHhCCHHHHHH
Q 007721 420 MFHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLR-FRQSLLLLRLNCQKAAMR 498 (591)
Q Consensus 420 ~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~-~~~g~~l~~l~~~~eA~~ 498 (591)
|+ =-+..-+||++-+.+ ...|.++..+|..+||++
T Consensus 100 -------------------------d~-------------------~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~ 135 (242)
T 3kae_A 100 -------------------------DA-------------------RIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIG 135 (242)
T ss_dssp -------------------------CH-------------------HHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred -------------------------cc-------------------ccceeeeccchHHHHHHHHHHHHHHhcCHHHhhh
Confidence 10 013344678887764 557999999999999999
Q ss_pred HHHHHHhcCCchH
Q 007721 499 CLRLARNHSSSEH 511 (591)
Q Consensus 499 ~~~~Al~l~p~~~ 511 (591)
.+.+...+.|-.+
T Consensus 136 y~~~Sf~~~~lf~ 148 (242)
T 3kae_A 136 HYVRSFGKSFLFS 148 (242)
T ss_dssp HHHHHHHHCCCHH
T ss_pred HhhhhcCCccccc
Confidence 9999999998654
No 275
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=91.31 E-value=0.63 Score=50.13 Aligned_cols=59 Identities=5% Similarity=-0.207 Sum_probs=29.5
Q ss_pred HHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHH
Q 007721 463 LAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWIL 521 (591)
Q Consensus 463 l~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l 521 (591)
...|.+|+.+.|+++..|+.+|.+-...|+.-+|+=.|.+++....-.+-|..|+...+
T Consensus 172 ~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f 230 (497)
T 1ya0_A 172 ESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKAL 230 (497)
T ss_dssp HHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHH
Confidence 33555555555555555555555555555555555555555544444444555544443
No 276
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=91.13 E-value=3.9 Score=45.77 Aligned_cols=49 Identities=8% Similarity=-0.055 Sum_probs=37.5
Q ss_pred HHHHHHhCCHHHHHHHHHHHHhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 007721 359 AVAKMEEGQIRAAISEIDRIIVFKLSVDCLELRAWLFIAADDYESALRDTLAL 411 (591)
Q Consensus 359 g~~l~~l~~~~eAl~~~~~al~l~p~~~~~~~r~~~~~~~g~~~~A~~d~~~a 411 (591)
....+.+|++++|.+..+. -.++..|...|....+.|+++.|++.|.++
T Consensus 659 f~~~l~~~~~~~A~~~~~~----~~~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 659 FELALKVGQLTLARDLLTD----ESAEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHTCHHHHHHHHTT----CCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred eehhhhcCCHHHHHHHHHh----hCcHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 4456778889888876432 134677888888899999999999999876
No 277
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=90.53 E-value=3.1 Score=37.17 Aligned_cols=51 Identities=8% Similarity=0.021 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCCh
Q 007721 335 REKIVDLNYASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLSV 385 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~~ 385 (591)
++|...|+.++.+...++..|...|.--.++|+...|...+.+||++.|.+
T Consensus 77 d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~ 127 (161)
T 4h7y_A 77 DDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVP 127 (161)
T ss_dssp GGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCc
Confidence 445555555655566666666666666666666666666666666666644
No 278
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=90.24 E-value=1.2 Score=50.27 Aligned_cols=54 Identities=17% Similarity=0.175 Sum_probs=47.3
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 007721 358 RAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLAL 411 (591)
Q Consensus 358 rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~a 411 (591)
=+.-++..|+++-|+...++|+...|+ ..+|+.++.+|..+|||+.|+--++-.
T Consensus 343 Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 343 QTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 355677789999999999999999996 899999999999999999999776665
No 279
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=88.70 E-value=8.4 Score=35.11 Aligned_cols=68 Identities=12% Similarity=0.126 Sum_probs=53.4
Q ss_pred hHHHHhHHHHHHHhCCHHHHHHHHHHHHh--cC---------------C-ChHHHH-HHHHHHHHcCCHHHHHHHHHHHH
Q 007721 352 SFPYKYRAVAKMEEGQIRAAISEIDRIIV--FK---------------L-SVDCLE-LRAWLFIAADDYESALRDTLALL 412 (591)
Q Consensus 352 ~~ay~~rg~~l~~l~~~~eAl~~~~~al~--l~---------------p-~~~~~~-~r~~~~~~~g~~~~A~~d~~~al 412 (591)
.-+.++.+.++..+++|..|+..+.+.|+ .+ | +-+.++ ..|.++-..|+.+||+..|.+..
T Consensus 62 ~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf 141 (242)
T 3kae_A 62 CTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSF 141 (242)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhc
Confidence 34456677789999999999999999993 22 3 222333 47889999999999999999999
Q ss_pred hcCCcch
Q 007721 413 ALESNYM 419 (591)
Q Consensus 413 ~l~P~~~ 419 (591)
..+|-+.
T Consensus 142 ~~~~lf~ 148 (242)
T 3kae_A 142 GKSFLFS 148 (242)
T ss_dssp HHCCCHH
T ss_pred CCccccc
Confidence 9999764
No 280
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=88.21 E-value=1.2 Score=43.70 Aligned_cols=60 Identities=18% Similarity=-0.012 Sum_probs=52.8
Q ss_pred HHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH
Q 007721 486 LLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFE 545 (591)
Q Consensus 486 ~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~ 545 (591)
-+++-|..++|+......++-+|.|++....+-.+|.-.|+++.|....+-+..++|++.
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~ 65 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYL 65 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhh
Confidence 456778888999999999999999999998888889999999999999999999999887
No 281
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=82.69 E-value=23 Score=39.32 Aligned_cols=47 Identities=19% Similarity=0.133 Sum_probs=24.1
Q ss_pred HHHHcCCHHHHHHHHHHhhcccccHHHHHHHHHHhhhcCCCCCc--hhHHHHHHHHHh
Q 007721 520 ILYDTGHREEALSRAEKSISIERTFEAFFLKAYILADTNLDPES--STYVIQLLEEAL 575 (591)
Q Consensus 520 ~l~~~g~~eeAl~~~e~ai~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 575 (591)
+++..|++++|++.|.+.-.. -+|+.||-+ .+|+. -..|+++.-+.|
T Consensus 745 ~~~~~g~~~~a~~~~~~~~~~--------~~A~~lA~~-~~~~~~~i~~~~~~~~~~L 793 (814)
T 3mkq_A 745 AYWIAGDIQGAKDLLIKSQRF--------SEAAFLGST-YGLGDNEVNDIVTKWKENL 793 (814)
T ss_dssp HHHHHTCHHHHHHHHHHTTCH--------HHHHHHHHH-TTCCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHcCCh--------HHHHHHHHH-hCCChHHHHHHHHHHHHHH
Confidence 345567777777776654432 234444444 34444 345555544444
No 282
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=82.64 E-value=48 Score=34.25 Aligned_cols=168 Identities=12% Similarity=0.026 Sum_probs=93.9
Q ss_pred HHHHHHHhhhHHhhhccHHHHHHHHHHHhhccccchhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcCCc
Q 007721 255 RMLALHQLGCVMFEREEYKDACYYFEAAADAGHIYSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLYNLG 334 (591)
Q Consensus 255 ~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~~~~~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~~~ 334 (591)
+..+...+|..+...|++++-.+.+...... .. .++ ...+-+.....|......+...
T Consensus 18 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~--------kak~~k~v~~l~~~~~~~~~~~--------- 75 (394)
T 3txn_A 18 KEQGILQQGELYKQEGKAKELADLIKVTRPF---LS--SIS--------KAKAAKLVRSLVDMFLDMDAGT--------- 75 (394)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHTTTG---GG--GSC--------HHHHHHHHHHHHHHHTTSCCCH---------
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH---HH--Hhc--------hHHHHHHHHHHHHHHhcCCCcH---------
Confidence 3467889999999999998887776543221 01 011 1123344444444332211111
Q ss_pred HHHHHHHHHHHHcCCCC--hH----HHHhHHHHHHHhCCHHHHHHHHHHHHhc----CCC---hHHHHHHHHHHHHcCCH
Q 007721 335 REKIVDLNYASELDPTL--SF----PYKYRAVAKMEEGQIRAAISEIDRIIVF----KLS---VDCLELRAWLFIAADDY 401 (591)
Q Consensus 335 ~eA~~dl~~Ai~LdP~~--~~----ay~~rg~~l~~l~~~~eAl~~~~~al~l----~p~---~~~~~~r~~~~~~~g~~ 401 (591)
+.-+.....+++..-+. .+ .-.++|..|.+.|+|.+|+..+++.++- +.. .+.+.....++..+|++
T Consensus 76 ~~~~~~~~~~~~~a~~~~r~flr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~ 155 (394)
T 3txn_A 76 GIEVQLCKDCIEWAKQEKRTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNL 155 (394)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccH
Confidence 00111111122111111 11 1237899999999999999999999874 111 23334455789999999
Q ss_pred HHHHHHHHHHHhcCCc-chhhhhhchHhHHHHHHHh-hhcccCch
Q 007721 402 ESALRDTLALLALESN-YMMFHGRVSGDHLVKLLNH-HVRSWSPA 444 (591)
Q Consensus 402 ~~A~~d~~~al~l~P~-~~~~~~~~~~~~~~~~l~~-~~~~~~~a 444 (591)
..+.+.|.+|.+.... +.+-..++......|.+.. ..++|.+|
T Consensus 156 ~k~k~~l~~a~~~~~ai~~~p~i~a~i~~~~Gi~~l~~~rdyk~A 200 (394)
T 3txn_A 156 PKARAALTSARTTANAIYCPPKVQGALDLQSGILHAADERDFKTA 200 (394)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTSCHHHH
T ss_pred HHHHHHHHHHHhhhccCCCCHHHHHHHHHHhhHHHHHhccCHHHH
Confidence 9999999999876411 1111122333444444555 56777776
No 283
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=82.10 E-value=1.1 Score=48.52 Aligned_cols=81 Identities=11% Similarity=0.061 Sum_probs=60.2
Q ss_pred eEEEEcCeEEEhhHHHHhhcCHHHHHhhcCC-----CCCCCCceeEecCCCCCHHHHHHHHHHHhc-CCCCCCChh-HHH
Q 007721 57 VTFCVRDKEISFVRNKIASLSSPFKAMLYGG-----FVESKRKTIDFSHDGVSVEGLRAVEVYTRT-SRVDLFCPG-IVL 129 (591)
Q Consensus 57 V~f~v~g~~~~aHr~iLaa~S~yF~amf~~~-----~~Es~~~~I~l~~~~vs~~~~~~ll~ylYt-g~~~~~~~~-~v~ 129 (591)
|++-|||..|...+..|..- =.+|+..- +.....+++-| +=+|..|+.+|+|+.| |++. .+.+ .+.
T Consensus 54 v~lNVgG~~f~t~~~tL~~~---p~s~l~~~~~~~~~~~~~~~~~f~---DR~~~~F~~IL~~~r~~g~l~-~p~~~~~~ 126 (514)
T 2r9r_B 54 VVINISGLRFETQLKTLAQF---PETLLGDPKKRMRYFDPLRNEYFF---DRNRPSFDAILYYYQSGGRLR-RPVNVPLD 126 (514)
T ss_dssp EEEEETTEEEEEEHHHHTTS---TTSTTTCHHHHGGGEETTTTEEEE---CSCHHHHHHHHHHHHHTSCCC-CCTTSCHH
T ss_pred EEEEeCCEEEEecHHHHhcC---CCCcccccccCCcccCCCCCCEEE---cCChHHHHHHHHHHhcCCccc-cCCcccHH
Confidence 99999999999999999643 23343321 11123457777 6689999999999999 9988 4443 456
Q ss_pred HHHHHHhhhChHHHH
Q 007721 130 ELLSFANRFCCEEMK 144 (591)
Q Consensus 130 ~lL~~A~~~~i~~L~ 144 (591)
.++.=|.+|+++.+.
T Consensus 127 ~~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 127 IFSEEIRFYELGEEA 141 (514)
T ss_dssp HHHHHHHHTTCCHHH
T ss_pred HHHHHHHhcCCCHHH
Confidence 788899999997654
No 284
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=81.56 E-value=9.3 Score=45.44 Aligned_cols=140 Identities=14% Similarity=-0.001 Sum_probs=81.0
Q ss_pred HhHHHHHHHhCCHHHHHHHHHHHHhcCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHh-cCCcchhhhhhchHhHHHHH
Q 007721 356 KYRAVAKMEEGQIRAAISEIDRIIVFKL-SVDCLELRAWLFIAADDYESALRDTLALLA-LESNYMMFHGRVSGDHLVKL 433 (591)
Q Consensus 356 ~~rg~~l~~l~~~~eAl~~~~~al~l~p-~~~~~~~r~~~~~~~g~~~~A~~d~~~al~-l~P~~~~~~~~~~~~~~~~~ 433 (591)
..+..-+...|+++-|.. .+.+-| ++..-+.+|.++...|++++|...|++|.. +.++.. .......
T Consensus 816 ~~l~~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~-------l~~~~~~ 884 (1139)
T 4fhn_B 816 TELVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTS-------QFAVLRE 884 (1139)
T ss_dssp HHHHHHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCC-------SCSSHHH
T ss_pred HHHHHHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccch-------hhhhhcc
Confidence 345566777788876643 334455 455568899999999999999999998754 222210 0000000
Q ss_pred HHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHH-
Q 007721 434 LNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHE- 512 (591)
Q Consensus 434 l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~- 512 (591)
+..+........+.+.+|.....++.+.|.++.+++..+.|++..+.+.+
T Consensus 885 -----------------------------~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~~~~ 935 (1139)
T 4fhn_B 885 -----------------------------FQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDED 935 (1139)
T ss_dssp -----------------------------HHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSCCHH
T ss_pred -----------------------------cccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCChh
Confidence 00011111112223345555566777778888888888888876643322
Q ss_pred ----HHHhHHHHHHHcCCHHHHHHHHH
Q 007721 513 ----RLVYEGWILYDTGHREEALSRAE 535 (591)
Q Consensus 513 ----a~~~~G~~l~~~g~~eeAl~~~e 535 (591)
.+.+.=....++|+|++|....-
T Consensus 936 ~~~~l~~~iFk~~L~l~~ye~Ay~aL~ 962 (1139)
T 4fhn_B 936 LSIAITHETLKTACAAGKFDAAHVALM 962 (1139)
T ss_dssp HHHHHHHHHHHHHHHHCCSGGGGHHHH
T ss_pred hHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 22333344667788888765553
No 285
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=79.78 E-value=1.2 Score=47.79 Aligned_cols=134 Identities=9% Similarity=-0.026 Sum_probs=49.9
Q ss_pred HHHHHHhCCHHHHHHHHHHHHh---c--------CC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchh------
Q 007721 359 AVAKMEEGQIRAAISEIDRIIV---F--------KL-SVDCLELRAWLFIAADDYESALRDTLALLALESNYMM------ 420 (591)
Q Consensus 359 g~~l~~l~~~~eAl~~~~~al~---l--------~p-~~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~------ 420 (591)
-.-+.+.+++++|.+.-+..+. + |+ ....|+.-..++..+|+..+.+.......++.|....
T Consensus 143 ~i~L~d~k~~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~ 222 (523)
T 4b4t_S 143 QLFLWDSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIAS 222 (523)
T ss_dssp ------------------------------------------------------------CHHHHHHHHTHHHHHHHHCC
T ss_pred HHHHhccccHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHh
Confidence 3346667888888877766551 1 12 1223444444566677776655444444443332110
Q ss_pred ----hhhhchHhHHHHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCC-------chhHhhhHHHHHH
Q 007721 421 ----FHGRVSGDHLVKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGK-------SFLRFRQSLLLLR 489 (591)
Q Consensus 421 ----~~~~~~~~~~~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~-------~~~~~~~g~~l~~ 489 (591)
..++....++.-....+...+++| ...+.++. -|.+ +.++|..|.+...
T Consensus 223 lr~D~~~qa~l~nllLRnYL~~~~y~qA------------------~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~ 282 (523)
T 4b4t_S 223 LKHDNETKAMLINLILRDFLNNGEVDSA------------------SDFISKLE--YPHTDVSSSLEARYFFYLSKINAI 282 (523)
T ss_dssp SCSSSCHHHHHHHHHHHHHHHSSCSTTH------------------HHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHH
T ss_pred cccCcchhHHHHHHHHHHHHccCcHHHH------------------HHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHH
Confidence 013333333333333334444444 44445542 2322 5678889999999
Q ss_pred hCCHHHHHHHHHHHHhcCCchHH
Q 007721 490 LNCQKAAMRCLRLARNHSSSEHE 512 (591)
Q Consensus 490 l~~~~eA~~~~~~Al~l~p~~~~ 512 (591)
.+++.+|.+.+..|++..|.+..
T Consensus 283 q~~Y~eA~~~L~~A~rkap~~~~ 305 (523)
T 4b4t_S 283 QLDYSTANEYIIAAIRKAPHNSK 305 (523)
T ss_dssp TTCHHHHHHHHHHHTSSCSCSSS
T ss_pred hccHHHHHHHHHHHHHhCCcchh
Confidence 99999999999999999987643
No 286
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=79.72 E-value=36 Score=30.98 Aligned_cols=51 Identities=18% Similarity=0.011 Sum_probs=38.1
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 007721 358 RAVAKMEEGQIRAAISEIDRIIVFKLSVDCLELRAWLFIAADDYESALRDTLALL 412 (591)
Q Consensus 358 rg~~l~~l~~~~eAl~~~~~al~l~p~~~~~~~r~~~~~~~g~~~~A~~d~~~al 412 (591)
|-..-++.|+++.|.+..+.. -+...|..+|..-...|+++-|.++|+++-
T Consensus 11 rF~LAL~lg~l~~A~e~a~~l----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 11 RFDLALEYGNLDAALDEAKKL----NDSITWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred HHHHHHhcCCHHHHHHHHHHh----CCHHHHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 334456788888888876543 346678888888888999999998888763
No 287
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.53 E-value=2 Score=35.72 Aligned_cols=34 Identities=18% Similarity=0.214 Sum_probs=31.6
Q ss_pred CChhHHHHHHHHHhhhChHHHHHHHHHHHHhhcC
Q 007721 123 FCPGIVLELLSFANRFCCEEMKSACDAHLASLVG 156 (591)
Q Consensus 123 ~~~~~v~~lL~~A~~~~i~~L~~~C~~~L~~~i~ 156 (591)
++++|.+.++.+|+.|+++.|++.|.+|+.....
T Consensus 8 L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~ 41 (105)
T 2eqx_A 8 VQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLA 41 (105)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999987654
No 288
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=78.86 E-value=18 Score=37.56 Aligned_cols=59 Identities=10% Similarity=-0.076 Sum_probs=48.3
Q ss_pred hhHHHHHHhCCHHHHHHHHHHHHhc------CCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcc
Q 007721 482 RQSLLLLRLNCQKAAMRCLRLARNH------SSSEHERLVYEGWILYDTGHREEALSRAEKSISI 540 (591)
Q Consensus 482 ~~g~~l~~l~~~~eA~~~~~~Al~l------~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l 540 (591)
++|.++...|.+.+|+..+++.++- ...--|.+..+..++..+|++.++-+.|++|..+
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~ 168 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTT 168 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 6788999999999999999888873 1234567788888899999999999999888543
No 289
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=76.27 E-value=20 Score=42.57 Aligned_cols=135 Identities=13% Similarity=-0.015 Sum_probs=83.0
Q ss_pred HHhhhccHHHHHHHHHHHhhccccchhhhhHHHHHHhCChHHHHHHHHHHHHhc-CCCHHHHHHHHhcCCcHHHHHHHHH
Q 007721 265 VMFEREEYKDACYYFEAAADAGHIYSLAGLARAKYKVGQQYSAYKLINSIISEH-KPTGWMYQERSLYNLGREKIVDLNY 343 (591)
Q Consensus 265 ~~~~~g~~~eA~~~f~~Al~~~~~~a~~~la~~~~~~G~~~~A~~~~~~aI~~~-~~~g~a~~~r~~y~~~~eA~~dl~~ 343 (591)
.....+.++-|.+ +..=+..++. ..+-+|+++...|++++|...|.++...- .... .. .....+.....
T Consensus 821 ~l~~~~~~~~~~~-l~~~~~~~~~-~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~-------l~-~~~~~~~~~~~ 890 (1139)
T 4fhn_B 821 KLFLFKQYNACMQ-LIGWLNSDPI-AVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTS-------QF-AVLREFQEIAE 890 (1139)
T ss_dssp HHHHHSCTTHHHH-HHHHSCCCHH-HHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCC-------SC-SSHHHHHHHHH
T ss_pred HHHHhhhHHHHHH-HhhhccCCcH-HHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccch-------hh-hhhcccccccc
Confidence 3444555554433 2221222222 34567889999999999999988763321 1000 00 00112223333
Q ss_pred HHHcCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCC-ChH-----HHHHHHHHHHHcCCHHHHHHHHH
Q 007721 344 ASELDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKL-SVD-----CLELRAWLFIAADDYESALRDTL 409 (591)
Q Consensus 344 Ai~LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p-~~~-----~~~~r~~~~~~~g~~~~A~~d~~ 409 (591)
........+..|.....++-+.|.++.++.....||+..+ +.+ .|.+....+.++|+|++|-....
T Consensus 891 ~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~ 962 (1139)
T 4fhn_B 891 KYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALM 962 (1139)
T ss_dssp TTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHH
T ss_pred cccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 3344455667788888888899999999999999999865 322 34445668999999999976554
No 290
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=75.14 E-value=2.4 Score=34.93 Aligned_cols=33 Identities=15% Similarity=0.207 Sum_probs=30.2
Q ss_pred cCCHHhHHHHHHHHHHhChHHHHHHHHHHHHhhh
Q 007721 155 VGDIEDALILIDYGLEERATLLVASCLQVLLREL 188 (591)
Q Consensus 155 i~~~~n~~~ll~~A~~~~~~~L~~~c~~~i~~n~ 188 (591)
++ .+|+..++..|..++++.|.+.|.+|+.+++
T Consensus 77 ~~-~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 77 LE-ADTVLATLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp CC-TTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred CC-HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 55 6899999999999999999999999998764
No 291
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=72.92 E-value=7.6 Score=41.67 Aligned_cols=75 Identities=15% Similarity=-0.013 Sum_probs=62.5
Q ss_pred HhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHH-HHHHHHHHh
Q 007721 480 RFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFE-AFFLKAYIL 554 (591)
Q Consensus 480 ~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~-~~~~~~~~~ 554 (591)
...+|.+-........|...|++|+.+.|+++..++.+|.+....|+.-+|+=.|-||+.-...|+ |.-+-...+
T Consensus 155 l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f 230 (497)
T 1ya0_A 155 LVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKAL 230 (497)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHH
Confidence 345677766677778999999999999999999999999999999999999999999999766666 554444443
No 292
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=67.21 E-value=62 Score=37.86 Aligned_cols=84 Identities=8% Similarity=-0.056 Sum_probs=57.6
Q ss_pred ChHHHHhHHHHHHHhCCHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHcCC-HHHHHHHHHHHHh--cCCcchhhhhhc
Q 007721 351 LSFPYKYRAVAKMEEGQIRAAISEIDRIIVF--KLSVDCLELRAWLFIAADD-YESALRDTLALLA--LESNYMMFHGRV 425 (591)
Q Consensus 351 ~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l--~p~~~~~~~r~~~~~~~g~-~~~A~~d~~~al~--l~P~~~~~~~~~ 425 (591)
+...|+.+-..|.+.|+.++|+..|++..+- .||.-.|...-..+.+.|+ .++|.+.|+.-.+ +.||.+.|.+-.
T Consensus 164 dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~glcK~G~~~e~A~~Ll~EM~~kG~~PD~vtY~~ll 243 (1134)
T 3spa_A 164 TLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQCMGRQDQDAGTIERCLEQMSQEGLKLQALFTAVLL 243 (1134)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHTCCSHHHHHHSCC
T ss_pred CHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCCCChhhccccc
Confidence 4567888888888888888888888888764 5666666655556666776 4677787777766 567776655544
Q ss_pred hHhHHHHHH
Q 007721 426 SGDHLVKLL 434 (591)
Q Consensus 426 ~~~~~~~~l 434 (591)
......+.+
T Consensus 244 ~~~eR~~vL 252 (1134)
T 3spa_A 244 SEEDRATVL 252 (1134)
T ss_dssp CHHHHHHHH
T ss_pred ChhhHHHHH
Confidence 444443333
No 293
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=64.28 E-value=1.1e+02 Score=29.66 Aligned_cols=69 Identities=26% Similarity=0.357 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHH-----hcCCchHHHHHhHHHH------HHH-cCCHHHHHHHHHHhhcccccHHHHHHHHHHhhhcCCC
Q 007721 493 QKAAMRCLRLAR-----NHSSSEHERLVYEGWI------LYD-TGHREEALSRAEKSISIERTFEAFFLKAYILADTNLD 560 (591)
Q Consensus 493 ~~eA~~~~~~Al-----~l~p~~~~a~~~~G~~------l~~-~g~~eeAl~~~e~ai~l~~~~~~~~~~~~~~~~~~~~ 560 (591)
.+.|+..|+.|. .+.|.++-. +|++ +|. +++.++|.....+|+ -.|++--|+ |+
T Consensus 151 ~e~a~~aY~~A~~iA~~~L~pthPir---LGLaLNfSVFyYEiln~~~~Ac~lAk~Af----------d~Ai~eld~-L~ 216 (260)
T 1o9d_A 151 AESTLTAYKAAQDIATTELAPTHPIR---LGLALNFSVFYYEILNSPDRACNLAKQAF----------DEAIAELDT-LG 216 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHH---HHHHHHHHHHHHHTSCCHHHHHHHHHHHH----------HHHHHHHHH-TC
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcHH---HHHHHHHHHHHHHHccCHHHHHHHHHHHH----------HHHHHhhhc-cC
Confidence 346777888777 477888743 4443 333 699999999998874 456665554 44
Q ss_pred CCc---hhHHHHHHHHHh
Q 007721 561 PES---STYVIQLLEEAL 575 (591)
Q Consensus 561 ~~~---~~~~~~~~~~~~ 575 (591)
-++ |+.++|||-+=|
T Consensus 217 EesykDstlImqLLRDNL 234 (260)
T 1o9d_A 217 EESYKDSTLIMQLLRDNL 234 (260)
T ss_dssp -----CHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHH
Confidence 444 788999998755
No 294
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=64.17 E-value=5.3 Score=35.69 Aligned_cols=34 Identities=12% Similarity=0.156 Sum_probs=31.0
Q ss_pred CChhHHHHHHHHHhhhChHHHHHHHHHHHHhhcC
Q 007721 123 FCPGIVLELLSFANRFCCEEMKSACDAHLASLVG 156 (591)
Q Consensus 123 ~~~~~v~~lL~~A~~~~i~~L~~~C~~~L~~~i~ 156 (591)
++.+++.+++.+|.+|.++.|+..|.+|+..+..
T Consensus 132 l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~ 165 (172)
T 3htm_A 132 LSVENAAEILILADLHSADQLKTQAVDFINYHAT 165 (172)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 6788999999999999999999999999998765
No 295
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=62.93 E-value=8.6 Score=31.00 Aligned_cols=29 Identities=21% Similarity=0.162 Sum_probs=24.7
Q ss_pred hHHHHhHHHHHHHhCCHHHHHHHHHHHHh
Q 007721 352 SFPYKYRAVAKMEEGQIRAAISEIDRIIV 380 (591)
Q Consensus 352 ~~ay~~rg~~l~~l~~~~eAl~~~~~al~ 380 (591)
+..+..|+..+...|+|++||+...+|..
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa~ 43 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKATT 43 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHHH
Confidence 55677899999999999999998888873
No 296
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=62.13 E-value=7.4 Score=31.38 Aligned_cols=29 Identities=24% Similarity=0.256 Sum_probs=25.2
Q ss_pred chhHhhhHHHHHHhCCHHHHHHHHHHHHh
Q 007721 477 SFLRFRQSLLLLRLNCQKAAMRCLRLARN 505 (591)
Q Consensus 477 ~~~~~~~g~~l~~l~~~~eA~~~~~~Al~ 505 (591)
+..+-+++..+.+.|+++||+.+.++|..
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa~ 43 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKATT 43 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHHH
Confidence 56788999999999999999998887763
No 297
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=62.04 E-value=31 Score=35.94 Aligned_cols=67 Identities=12% Similarity=-0.022 Sum_probs=51.0
Q ss_pred CCChHHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC----hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Q 007721 349 PTLSFPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS----VDCLELRAWLFIAADDYESALRDTLALLALE 415 (591)
Q Consensus 349 P~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~----~~~~~~r~~~~~~~g~~~~A~~d~~~al~l~ 415 (591)
..-..++..+|..+.+.|++++|+..|.++...-.+ .+.+.....+....+||..|...++++..+-
T Consensus 128 ~e~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~ 198 (429)
T 4b4t_R 128 LEQAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMI 198 (429)
T ss_dssp CCCSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh
Confidence 344567888999999999999999999988876442 3444445567788899999999999887653
No 298
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=57.57 E-value=98 Score=36.21 Aligned_cols=66 Identities=8% Similarity=-0.086 Sum_probs=56.0
Q ss_pred HHHHhHHHHHHHhCCHHHHHHHHHHHH-----hcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHh--cCCcc
Q 007721 353 FPYKYRAVAKMEEGQIRAAISEIDRII-----VFKLSVDCLELRAWLFIAADDYESALRDTLALLA--LESNY 418 (591)
Q Consensus 353 ~ay~~rg~~l~~l~~~~eAl~~~~~al-----~l~p~~~~~~~r~~~~~~~g~~~~A~~d~~~al~--l~P~~ 418 (591)
..|..+-..|.+.|+.++|...|+..- ...|+...|...-..+.+.|+.++|+..|+.-.+ +.||-
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDv 200 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDL 200 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcH
Confidence 467778889999999999999997654 4588988888888888999999999999999877 56774
No 299
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=57.38 E-value=8.5 Score=32.55 Aligned_cols=32 Identities=6% Similarity=0.179 Sum_probs=29.0
Q ss_pred cCCHHhHHHHHHHHHHhChHHHHHHHHHHHHhh
Q 007721 155 VGDIEDALILIDYGLEERATLLVASCLQVLLRE 187 (591)
Q Consensus 155 i~~~~n~~~ll~~A~~~~~~~L~~~c~~~i~~n 187 (591)
++ .+|+..++..|..++.+.|.+.|.+|+.++
T Consensus 95 ~~-~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 95 LR-EGNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp CC-TTTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred cC-HHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 45 689999999999999999999999999764
No 300
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=56.25 E-value=4.5 Score=34.96 Aligned_cols=35 Identities=11% Similarity=-0.018 Sum_probs=28.3
Q ss_pred cCCHHhHHHHHHHHHHhChHHHHHHHHHHHHhhhHh
Q 007721 155 VGDIEDALILIDYGLEERATLLVASCLQVLLRELPS 190 (591)
Q Consensus 155 i~~~~n~~~ll~~A~~~~~~~L~~~c~~~i~~n~~~ 190 (591)
++ .+|+..++..|..++.+.|++.|.+|+.+++..
T Consensus 87 i~-~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~ 121 (135)
T 2yy9_A 87 LT-SGNRDQVLLAAKELRVPEAVELCQSFQPQTSVG 121 (135)
T ss_dssp CC-TTTHHHHHHHHHHTTCHHHHHHHHHCCC-----
T ss_pred CC-HHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccC
Confidence 55 689999999999999999999999999888765
No 301
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=54.66 E-value=3.6 Score=35.69 Aligned_cols=34 Identities=12% Similarity=0.013 Sum_probs=31.1
Q ss_pred cCCHHhHHHHHHHHHHhChHHHHHHHHHHHHhhhH
Q 007721 155 VGDIEDALILIDYGLEERATLLVASCLQVLLRELP 189 (591)
Q Consensus 155 i~~~~n~~~ll~~A~~~~~~~L~~~c~~~i~~n~~ 189 (591)
++ .+|+..++..|..++.+.|.+.|.+|+.+++.
T Consensus 101 i~-~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~ 134 (138)
T 2z8h_A 101 LS-KDNVDEVCRCVEFLSVHNIEESCFQFLKFKFL 134 (138)
T ss_dssp CC-TTTHHHHHHHHHHHTCGGGHHHHHHHTTCCCS
T ss_pred cC-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhcc
Confidence 55 68999999999999999999999999988765
No 302
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=52.34 E-value=9.9 Score=37.70 Aligned_cols=34 Identities=12% Similarity=0.156 Sum_probs=30.9
Q ss_pred CChhHHHHHHHHHhhhChHHHHHHHHHHHHhhcC
Q 007721 123 FCPGIVLELLSFANRFCCEEMKSACDAHLASLVG 156 (591)
Q Consensus 123 ~~~~~v~~lL~~A~~~~i~~L~~~C~~~L~~~i~ 156 (591)
++.+++.+++.+|.+|+++.|+..|.+|+..++.
T Consensus 272 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~ 305 (312)
T 3hqi_A 272 LSVENAAEILILADLHSADQLKTQAVDFINYHAT 305 (312)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 6788999999999999999999999999998765
No 303
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=51.01 E-value=1.8e+02 Score=28.09 Aligned_cols=69 Identities=26% Similarity=0.317 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHH-----hcCCchHHHHHhHHHH------HHH-cCCHHHHHHHHHHhhcccccHHHHHHHHHHhhhcCCC
Q 007721 493 QKAAMRCLRLAR-----NHSSSEHERLVYEGWI------LYD-TGHREEALSRAEKSISIERTFEAFFLKAYILADTNLD 560 (591)
Q Consensus 493 ~~eA~~~~~~Al-----~l~p~~~~a~~~~G~~------l~~-~g~~eeAl~~~e~ai~l~~~~~~~~~~~~~~~~~~~~ 560 (591)
.+.|+..|+.|. .+.|.++-. +|++ +|. +++.++|.....+|+ -.|++--|+ |+
T Consensus 172 ~e~a~~aY~~A~~iA~~~L~pThPir---LGLaLNfSVFyYEIln~p~~Ac~LAk~AF----------d~Ai~eLd~-L~ 237 (261)
T 3ubw_A 172 AENSLVAYKAASDIAMTELPPTHPIR---LGLALNFSVFYYEILNSPDRACRLAKAAF----------DDAIAELDT-LS 237 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHH---HHHHHHHHHHHHHTSCCHHHHHHHHHHHH----------HHHHHTGGG-CC
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHH---HHHHHHHHHHHHHHcCCHHHHHHHHHHHH----------HHHHHHhhc-cC
Confidence 356777777776 477888744 4443 333 699999998888853 456666565 55
Q ss_pred CCc---hhHHHHHHHHHh
Q 007721 561 PES---STYVIQLLEEAL 575 (591)
Q Consensus 561 ~~~---~~~~~~~~~~~~ 575 (591)
-++ |+.++|||-+=|
T Consensus 238 eesykDstlImQLLRDNL 255 (261)
T 3ubw_A 238 EESYKDSTLIMQLLRDNL 255 (261)
T ss_dssp TTTHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHH
Confidence 454 788999998754
No 304
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=50.32 E-value=11 Score=31.18 Aligned_cols=30 Identities=7% Similarity=-0.050 Sum_probs=27.5
Q ss_pred cCCHHhHHHHHHHHHHhChHHHHHHHHHHHH
Q 007721 155 VGDIEDALILIDYGLEERATLLVASCLQVLL 185 (591)
Q Consensus 155 i~~~~n~~~ll~~A~~~~~~~L~~~c~~~i~ 185 (591)
++ .+|+..++..|..++.+.|.+.|.+|+.
T Consensus 86 ~~-~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 86 LD-SWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp CC-TTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred cC-HHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 45 6899999999999999999999999984
No 305
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=49.72 E-value=16 Score=30.55 Aligned_cols=32 Identities=22% Similarity=0.108 Sum_probs=28.8
Q ss_pred cCCHHhHHHHHHHHHHhChHHHHHHHHHHHHhh
Q 007721 155 VGDIEDALILIDYGLEERATLLVASCLQVLLRE 187 (591)
Q Consensus 155 i~~~~n~~~ll~~A~~~~~~~L~~~c~~~i~~n 187 (591)
++ .+|+..++..|..++.+.|.+.|.+|+.+.
T Consensus 89 ~~-~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 89 AK-AEDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp CC-GGGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CC-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 45 689999999999999999999999998653
No 306
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=49.55 E-value=13 Score=30.98 Aligned_cols=30 Identities=7% Similarity=0.056 Sum_probs=27.5
Q ss_pred cCCHHhHHHHHHHHHHhChHHHHHHHHHHHH
Q 007721 155 VGDIEDALILIDYGLEERATLLVASCLQVLL 185 (591)
Q Consensus 155 i~~~~n~~~ll~~A~~~~~~~L~~~c~~~i~ 185 (591)
++ .+|+..++..|..++.+.|.+.|.+|+.
T Consensus 88 i~-~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 88 LS-PENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CC-TTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cC-HHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 45 6899999999999999999999999874
No 307
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=48.96 E-value=10 Score=22.04 Aligned_cols=22 Identities=18% Similarity=0.341 Sum_probs=18.6
Q ss_pred HHHHHHHHHhChHHHHHHHHHH
Q 007721 162 LILIDYGLEERATLLVASCLQV 183 (591)
Q Consensus 162 ~~ll~~A~~~~~~~L~~~c~~~ 183 (591)
+.++.+|+.|+.++|...|+.-
T Consensus 2 ckvmcyaqrhsspellrrcldn 23 (26)
T 2plx_B 2 CKVMCYAQRHSSPELLRRCLDN 23 (26)
T ss_dssp HHHHHHHBCCCCHHHHHHHHHH
T ss_pred ceEEeehhhcCCHHHHHHHHhc
Confidence 4578899999999999999863
No 308
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=48.75 E-value=1.5e+02 Score=26.51 Aligned_cols=26 Identities=23% Similarity=0.271 Sum_probs=10.7
Q ss_pred hhHhhhHHHHHHhCCHHHHHHHHHHHH
Q 007721 478 FLRFRQSLLLLRLNCQKAAMRCLRLAR 504 (591)
Q Consensus 478 ~~~~~~g~~l~~l~~~~eA~~~~~~Al 504 (591)
.....-..+|.++|..+ ++..+...+
T Consensus 127 ~vr~~a~~aL~~~~~~~-~~~~L~~~l 152 (211)
T 3ltm_A 127 FVRIAAAFALGEIGDER-AVEPLIKAL 152 (211)
T ss_dssp HHHHHHHHHHHHHCCGG-GHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHH-HHHHHHHHH
Confidence 33334444444444432 444444433
No 309
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=48.33 E-value=8.3 Score=32.32 Aligned_cols=32 Identities=13% Similarity=0.022 Sum_probs=27.1
Q ss_pred cCCHHhHHHHHHHHHHhChHHHHHHHHHHHHhh
Q 007721 155 VGDIEDALILIDYGLEERATLLVASCLQVLLRE 187 (591)
Q Consensus 155 i~~~~n~~~ll~~A~~~~~~~L~~~c~~~i~~n 187 (591)
++ .+|+..++..|..++.+.|.+.|.+|+.++
T Consensus 86 ~~-~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 86 LT-SGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp CC-TTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred cC-HHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 45 689999999999999999999999998765
No 310
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=47.93 E-value=1.9e+02 Score=27.61 Aligned_cols=69 Identities=28% Similarity=0.352 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHH-----hcCCchHHHHHhHHHH------HHH-cCCHHHHHHHHHHhhcccccHHHHHHHHHHhhhcCCC
Q 007721 493 QKAAMRCLRLAR-----NHSSSEHERLVYEGWI------LYD-TGHREEALSRAEKSISIERTFEAFFLKAYILADTNLD 560 (591)
Q Consensus 493 ~~eA~~~~~~Al-----~l~p~~~~a~~~~G~~------l~~-~g~~eeAl~~~e~ai~l~~~~~~~~~~~~~~~~~~~~ 560 (591)
.+.|+..|+.|. .+.|.++-. +|++ +|. +++.++|.....+| |-.|++--|+ |+
T Consensus 147 ~~~a~~aY~~A~~iA~~~L~pthPir---LGLaLNfSVFyYEIln~~~~Ac~lAk~A----------fd~Ai~eld~-l~ 212 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEHMQPTHPIR---LGLALNYSVFYYEIQNAPEQACHLAKTA----------FDDAIAELDT-LN 212 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHH---HHHHHHHHHHHHHTSCCHHHHHHHHHHH----------HHHHHHTGGG-CC
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHH---HHHHHHHHHHHHHHcCCHHHHHHHHHHH----------HHHHHHHhhc-CC
Confidence 356777787776 477888744 3433 233 69999999888875 3456665555 55
Q ss_pred CCc---hhHHHHHHHHHh
Q 007721 561 PES---STYVIQLLEEAL 575 (591)
Q Consensus 561 ~~~---~~~~~~~~~~~~ 575 (591)
-++ |+.++|||-+=|
T Consensus 213 eesykDstlImqLLRDNL 230 (248)
T 3uzd_A 213 EDSYKDSTLIMQLLRDNL 230 (248)
T ss_dssp TTTHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHH
Confidence 444 888999998755
No 311
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=47.40 E-value=34 Score=34.76 Aligned_cols=44 Identities=14% Similarity=0.018 Sum_probs=33.9
Q ss_pred HHHHHHHHHH-----cCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHh
Q 007721 337 KIVDLNYASE-----LDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIV 380 (591)
Q Consensus 337 A~~dl~~Ai~-----LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~ 380 (591)
+++.|.+||. ++-.+.++|.++|..+.+.+++.||+..+-.|-.
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~ 324 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGY 324 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHH
Confidence 3444444443 5667889999999999999999999998877653
No 312
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=46.31 E-value=19 Score=29.93 Aligned_cols=29 Identities=10% Similarity=0.099 Sum_probs=26.9
Q ss_pred cCCHHhHHHHHHHHHHhChHHHHHHHHHHH
Q 007721 155 VGDIEDALILIDYGLEERATLLVASCLQVL 184 (591)
Q Consensus 155 i~~~~n~~~ll~~A~~~~~~~L~~~c~~~i 184 (591)
++ .+|+..++..|..++.+.|.+.|.+|+
T Consensus 91 ~~-~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 91 VS-TANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CC-GGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cC-HHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 45 689999999999999999999999987
No 313
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=45.22 E-value=37 Score=35.11 Aligned_cols=34 Identities=18% Similarity=0.265 Sum_probs=29.7
Q ss_pred cCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHHh
Q 007721 347 LDPTLSFPYKYRAVAKMEEGQIRAAISEIDRIIV 380 (591)
Q Consensus 347 LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al~ 380 (591)
++-.+.++|.++|..+.+.+++.||+..+-.|-.
T Consensus 313 Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~ 346 (550)
T 3u84_A 313 YRDEHIYPYMYLAGYHCRNRNVREALQAWADTAT 346 (550)
T ss_dssp STTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hccCCccceeecchhhhhcchHHHHHHHHHHHHH
Confidence 5677899999999999999999999998877653
No 314
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=44.92 E-value=60 Score=33.69 Aligned_cols=98 Identities=12% Similarity=0.014 Sum_probs=67.8
Q ss_pred chhhhhHHHHHHhCChHHHHHHHHHHHHhcCCCHHHHHHHHhcCCcHHHHHHHHHHHHcCCCChHHHHhHHHHHHHhCCH
Q 007721 289 YSLAGLARAKYKVGQQYSAYKLINSIISEHKPTGWMYQERSLYNLGREKIVDLNYASELDPTLSFPYKYRAVAKMEEGQI 368 (591)
Q Consensus 289 ~a~~~la~~~~~~G~~~~A~~~~~~aI~~~~~~g~a~~~r~~y~~~~eA~~dl~~Ai~LdP~~~~ay~~rg~~l~~l~~~ 368 (591)
.++..+|..+...|++..|.+.+.++.......+ .-...+.....+....+++
T Consensus 132 ~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~---------------------------~kid~~l~~irl~l~~~d~ 184 (429)
T 4b4t_R 132 QAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTG---------------------------AKIDVMLTIARLGFFYNDQ 184 (429)
T ss_dssp SCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCC---------------------------SHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChH---------------------------HHHHHHHHHHHHHHHhccH
Confidence 4667788889999999888888777655432211 1124556666677788899
Q ss_pred HHHHHHHHHHHhcC---CChHH----HHHHHHHHHHcCCHHHHHHHHHHHHh
Q 007721 369 RAAISEIDRIIVFK---LSVDC----LELRAWLFIAADDYESALRDTLALLA 413 (591)
Q Consensus 369 ~eAl~~~~~al~l~---p~~~~----~~~r~~~~~~~g~~~~A~~d~~~al~ 413 (591)
..|...++||-.+- +++.. ....|..+...++|.+|-..|-.++.
T Consensus 185 ~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~ 236 (429)
T 4b4t_R 185 LYVKEKLEAVNSMIEKGGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLA 236 (429)
T ss_dssp HHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhc
Confidence 99999999887652 23322 12345678889999999998887764
No 315
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=44.89 E-value=30 Score=26.65 Aligned_cols=32 Identities=6% Similarity=0.028 Sum_probs=27.3
Q ss_pred HhHHHHHHHhCCHHHHHHHHHHHHhcCCChHH
Q 007721 356 KYRAVAKMEEGQIRAAISEIDRIIVFKLSVDC 387 (591)
Q Consensus 356 ~~rg~~l~~l~~~~eAl~~~~~al~l~p~~~~ 387 (591)
..+|..+...|++++|+..|-+||..-|+|..
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~ 52 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQ 52 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHH
Confidence 45888999999999999999999999888654
No 316
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=43.73 E-value=2.2e+02 Score=26.99 Aligned_cols=69 Identities=26% Similarity=0.338 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHH-----hcCCchHHHHHhHHHH------HHH-cCCHHHHHHHHHHhhcccccHHHHHHHHHHhhhcCCC
Q 007721 493 QKAAMRCLRLAR-----NHSSSEHERLVYEGWI------LYD-TGHREEALSRAEKSISIERTFEAFFLKAYILADTNLD 560 (591)
Q Consensus 493 ~~eA~~~~~~Al-----~l~p~~~~a~~~~G~~------l~~-~g~~eeAl~~~e~ai~l~~~~~~~~~~~~~~~~~~~~ 560 (591)
.+.|+..|+.|+ .+.|.++-. +|.+ +|. +|+.++|.....+| |-.|++--|+ |+
T Consensus 146 ~e~a~~aY~~A~~iA~~~L~pthPir---LgLaLN~SVF~yEil~~~~~A~~lAk~a----------fd~Ai~eld~-l~ 211 (234)
T 2br9_A 146 AENSLVAYKAASDIAMTELPPTHPIR---LGLALNFSVFYYEILNSPDRACRLAKAA----------FDDAIAELDT-LS 211 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHH---HHHHHHHHHHHHHTSCCHHHHHHHHHHH----------HHHHHHTGGG-CC
T ss_pred HHHHHHHHHHHHHHHHccCCCCCcHH---HHHHHHHHHHHHHHcCCHHHHHHHHHHH----------HHHHHHhhhc-cC
Confidence 346777777776 477888744 3443 333 79999999999887 4456666664 44
Q ss_pred CC---chhHHHHHHHHHh
Q 007721 561 PE---SSTYVIQLLEEAL 575 (591)
Q Consensus 561 ~~---~~~~~~~~~~~~~ 575 (591)
-+ -|+.++|||-+=|
T Consensus 212 eesykDstlImqLLrDNL 229 (234)
T 2br9_A 212 EESYKDSTLIMQLLRDNL 229 (234)
T ss_dssp TTTHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHH
Confidence 33 3677889987744
No 317
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=42.76 E-value=1.2e+02 Score=31.40 Aligned_cols=97 Identities=10% Similarity=0.082 Sum_probs=63.6
Q ss_pred hHHHHHHHHHc-----CCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHH
Q 007721 462 SLAVINQMLIN-----DPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEK 536 (591)
Q Consensus 462 al~~~~~al~~-----~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ 536 (591)
++..|++|+.. .-.+..-|..+|-.+.|.+++.+|++.+-.|-. ..+. |.-++-|| +.|.+
T Consensus 283 ~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~----------Vi~~--YnY~reDe--EiYke 348 (489)
T 4gq4_A 283 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTAT----------VIQD--YNYCREDE--EIYKE 348 (489)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH----------HHTT--SCCCTTCH--HHHHH
T ss_pred HHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhh----------hhhh--cccccchH--HHHHH
Confidence 35566666663 234455577788899999999999998877621 1222 22344444 67888
Q ss_pred hhcccccHHHHHHHHHHh-hhc------CCCCCchhHHHHHHH
Q 007721 537 SISIERTFEAFFLKAYIL-ADT------NLDPESSTYVIQLLE 572 (591)
Q Consensus 537 ai~l~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~ 572 (591)
-+.|.-...-..+|+-+- .+. --||+|..+++.+..
T Consensus 349 ~~eIanelip~~lk~~~~~~~~~~~~~~l~dp~c~a~lL~fyD 391 (489)
T 4gq4_A 349 FFEVANDVIPNLLKEAASLLEAGSQGSALQDPECFAHLLRFYD 391 (489)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHTTCSSCGGGCHHHHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHhhhcccccccccCCCCcchhhhhccccC
Confidence 888877777778886654 221 138999988877643
No 318
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=41.67 E-value=75 Score=34.04 Aligned_cols=68 Identities=13% Similarity=0.029 Sum_probs=50.6
Q ss_pred HhHHHHHHHhCCHHHHHHHHHHHHhcCC---ChH---HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhh
Q 007721 356 KYRAVAKMEEGQIRAAISEIDRIIVFKL---SVD---CLELRAWLFIAADDYESALRDTLALLALESNYMMFHG 423 (591)
Q Consensus 356 ~~rg~~l~~l~~~~eAl~~~~~al~l~p---~~~---~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~ 423 (591)
.-+--.|...+.|++|....+|+.-... +.+ .++..|.++...++|.+|..++..|++..|......|
T Consensus 235 nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~~a~g 308 (523)
T 4b4t_S 235 NLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNSKSLG 308 (523)
T ss_dssp HHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSSSCSH
T ss_pred HHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcchhhhh
Confidence 3455567788999999999999962211 122 2355788999999999999999999999987654433
No 319
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=41.41 E-value=71 Score=28.52 Aligned_cols=60 Identities=12% Similarity=0.109 Sum_probs=50.0
Q ss_pred hhhHHHHHHhCCHHHHHHHHHHHHhcCCch-HHHHHhHHHHH--------HHcCCHHHHHHHHHHhhcc
Q 007721 481 FRQSLLLLRLNCQKAAMRCLRLARNHSSSE-HERLVYEGWIL--------YDTGHREEALSRAEKSISI 540 (591)
Q Consensus 481 ~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~-~~a~~~~G~~l--------~~~g~~eeAl~~~e~ai~l 540 (591)
+..|..+...|++=+|-+.++.+..-.|.. .+..++.|+|. +..|+...|...+++|+..
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 557778888899999999999999887654 34666777777 6779999999999999883
No 320
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=38.09 E-value=1e+02 Score=28.66 Aligned_cols=99 Identities=16% Similarity=0.086 Sum_probs=61.3
Q ss_pred cCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHH--HHcCCHHHHHHHHHHhhccc--c-----
Q 007721 472 NDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWIL--YDTGHREEALSRAEKSISIE--R----- 542 (591)
Q Consensus 472 ~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l--~~~g~~eeAl~~~e~ai~l~--~----- 542 (591)
.||....+|...+... ..+...++...|....+..=-..-|++|.+|+. -..|++++|-+.|++.|+-+ |
T Consensus 75 ND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~P~~rL~ 153 (202)
T 3esl_A 75 NDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNCRPYNRLL 153 (202)
T ss_dssp TCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHHHHH
T ss_pred CCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccHHHHH
Confidence 3455555555444433 122255788899888888877777888888875 45599999999999999853 3
Q ss_pred -cHHHHHHHHHHhhhcCC--CCCchhHHHHHHHHH
Q 007721 543 -TFEAFFLKAYILADTNL--DPESSTYVIQLLEEA 574 (591)
Q Consensus 543 -~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 574 (591)
.+..|-.+ +..+++ |-.+-..+-..++..
T Consensus 154 ~~~~~F~~R---~~~~~~~~~~~~~~~~~~~~~~~ 185 (202)
T 3esl_A 154 RSLSNYEDR---LREMNIVENQNSVPDSRERLKGR 185 (202)
T ss_dssp HHHHHHHHH---HHHTTCCCC----CHHHHHHHHH
T ss_pred HHHHHHHHH---HHhcCCCCCCCccccHHHHhccc
Confidence 33344443 455666 555444444555555
No 321
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=38.00 E-value=30 Score=27.27 Aligned_cols=33 Identities=21% Similarity=0.241 Sum_probs=23.1
Q ss_pred HhHHHHHHHcCCHHHHHHHHHHhhcccccHHHHHHHHHHh
Q 007721 515 VYEGWILYDTGHREEALSRAEKSISIERTFEAFFLKAYIL 554 (591)
Q Consensus 515 ~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~~~~~~~~~~ 554 (591)
..+|.-.-..|+++||+..|.+||+ +|.++.-.
T Consensus 23 v~~Ave~D~~g~y~eAl~lY~~aie-------~l~~alk~ 55 (83)
T 2w2u_A 23 AINAVKADKEGNAEEAITNYKKAIE-------VLAQLVSL 55 (83)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH-------HHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHH-------HHHHHHHH
Confidence 3333444677999999999999985 56666544
No 322
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=34.76 E-value=54 Score=28.98 Aligned_cols=65 Identities=9% Similarity=0.017 Sum_probs=47.9
Q ss_pred CChhHHHHHHHHHhhhCh---------------HHHHHHHHHHHHhhcCCHHhHHHHHHHHHHhChHHHHHHHHHHHHhh
Q 007721 123 FCPGIVLELLSFANRFCC---------------EEMKSACDAHLASLVGDIEDALILIDYGLEERATLLVASCLQVLLRE 187 (591)
Q Consensus 123 ~~~~~v~~lL~~A~~~~i---------------~~L~~~C~~~L~~~i~~~~n~~~ll~~A~~~~~~~L~~~c~~~i~~n 187 (591)
++...+..++..+....- ..+..-..+|+ .++ .++++.++..|...+...|.+.|.+++...
T Consensus 49 V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~--~id-~~~l~eLl~AAnyL~I~~Lld~~c~~va~~ 125 (159)
T 2ast_A 49 VNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFL--KVD-QGTLFELILAANYLDIKGLLDVTCKTVANM 125 (159)
T ss_dssp SCHHHHHHHHHHHHHTTTCCC-----------CCCCCHHHHHHT--CSC-HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCcCCCCcccccccccchhhhhHHHHHHH--cCC-HHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 566667777777765441 12233344555 377 899999999999999999999999999877
Q ss_pred hHh
Q 007721 188 LPS 190 (591)
Q Consensus 188 ~~~ 190 (591)
+..
T Consensus 126 i~g 128 (159)
T 2ast_A 126 IKG 128 (159)
T ss_dssp HSS
T ss_pred HcC
Confidence 654
No 323
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=34.63 E-value=22 Score=34.01 Aligned_cols=34 Identities=12% Similarity=0.240 Sum_probs=30.4
Q ss_pred CChhHHHHHHHHHhhhChHHHHHHHHHHHHhhcC
Q 007721 123 FCPGIVLELLSFANRFCCEEMKSACDAHLASLVG 156 (591)
Q Consensus 123 ~~~~~v~~lL~~A~~~~i~~L~~~C~~~L~~~i~ 156 (591)
++++|+..++.+|..|+++.|+..|.+|+.....
T Consensus 131 l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~ 164 (256)
T 3hve_A 131 IAAENCIGIRDFALHYCLHHVHYLATEYLETHFR 164 (256)
T ss_dssp CCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 6778999999999999999999999999976543
No 324
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=34.47 E-value=49 Score=26.03 Aligned_cols=30 Identities=7% Similarity=-0.058 Sum_probs=19.6
Q ss_pred HHHHHHHhhhHHhhhccHHHHHHHHHHHhh
Q 007721 255 RMLALHQLGCVMFEREEYKDACYYFEAAAD 284 (591)
Q Consensus 255 ~~~a~~~lG~~~~~~g~~~eA~~~f~~Al~ 284 (591)
++..+...++..-..|+|++|+.+|..|++
T Consensus 18 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 18 MARKYAINAVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 344445556666677788888877776655
No 325
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=34.19 E-value=37 Score=26.65 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=21.2
Q ss_pred HHHHHHHcCCHHHHHHHHHHhhcccccHHHHHHHHHHh
Q 007721 517 EGWILYDTGHREEALSRAEKSISIERTFEAFFLKAYIL 554 (591)
Q Consensus 517 ~G~~l~~~g~~eeAl~~~e~ai~l~~~~~~~~~~~~~~ 554 (591)
++.-.-..|+++||+..|.+||. +|.++.-.
T Consensus 17 ~Ave~D~~g~y~eAl~lY~~aie-------~l~~~lk~ 47 (83)
T 2v6y_A 17 LAVKADKEGKVEDAITYYKKAIE-------VLSQIIVL 47 (83)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH-------HHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHH-------HHHHHHHH
Confidence 33444567899999999998875 45555443
No 326
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=33.63 E-value=29 Score=33.61 Aligned_cols=33 Identities=6% Similarity=0.077 Sum_probs=30.2
Q ss_pred CChhHHHHHHHHHhhhChHHHHHHHHHHHHhhc
Q 007721 123 FCPGIVLELLSFANRFCCEEMKSACDAHLASLV 155 (591)
Q Consensus 123 ~~~~~v~~lL~~A~~~~i~~L~~~C~~~L~~~i 155 (591)
++.+|+..++.+|..|+++.|+..|.+|+....
T Consensus 139 l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f 171 (279)
T 3i3n_A 139 LHLSNCVAIHSLAHMYTLSQLALKAADMIRRNF 171 (279)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTH
T ss_pred CCcchHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 678899999999999999999999999998654
No 327
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=31.83 E-value=19 Score=31.25 Aligned_cols=29 Identities=14% Similarity=0.028 Sum_probs=26.6
Q ss_pred cCCHHhHHHHHHHHHHhChHHHHHHHHHHH
Q 007721 155 VGDIEDALILIDYGLEERATLLVASCLQVL 184 (591)
Q Consensus 155 i~~~~n~~~ll~~A~~~~~~~L~~~c~~~i 184 (591)
++ .+|+..++..|..++.+.|.+.|.+|+
T Consensus 115 i~-~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 115 LN-EDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp CC-TTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CC-HHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 45 689999999999999999999999875
No 328
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=31.81 E-value=2.7e+02 Score=24.66 Aligned_cols=87 Identities=9% Similarity=-0.035 Sum_probs=56.2
Q ss_pred HhHHHHHHHhCCHHHHHHHHHHHHhcCCCh--HHHHHHH--------HHHHHcCCHHHHHHHHHHHHh-cCCcchhhhhh
Q 007721 356 KYRAVAKMEEGQIRAAISEIDRIIVFKLSV--DCLELRA--------WLFIAADDYESALRDTLALLA-LESNYMMFHGR 424 (591)
Q Consensus 356 ~~rg~~l~~l~~~~eAl~~~~~al~l~p~~--~~~~~r~--------~~~~~~g~~~~A~~d~~~al~-l~P~~~~~~~~ 424 (591)
+..|..+...|+|=+|-+.+..+..-.+.+ +.-..+| ..+...|+...|.+.+++++. |.+--..+.|
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~L~~~~~~~~G- 114 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQYFRGVPNDYYG- 114 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTSCTTGGG-
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCCccCC-
Confidence 446677888899999999999999776543 3222222 346889999999999999988 4432112222
Q ss_pred chHhHHHHHHHhhhcccCc
Q 007721 425 VSGDHLVKLLNHHVRSWSP 443 (591)
Q Consensus 425 ~~~~~~~~~l~~~~~~~~~ 443 (591)
.....++..+.....+.+.
T Consensus 115 IDv~~L~~~~~~~l~dp~~ 133 (161)
T 2ijq_A 115 VDLLDVRTTVTNALSDPSA 133 (161)
T ss_dssp BCHHHHHHHHHHHHHCGGG
T ss_pred cCHHHHHHHHHHHhhCCcc
Confidence 3444555555544444443
No 329
>3j0g_M E3 protein; alphavirus, bioweapon, VEEV; 4.80A {Venezuelan equine encephalitis virus}
Probab=31.79 E-value=24 Score=25.73 Aligned_cols=14 Identities=43% Similarity=0.821 Sum_probs=11.4
Q ss_pred HHHHHHHhcCCCCC
Q 007721 568 IQLLEEALRCPSDG 581 (591)
Q Consensus 568 ~~~~~~~~~~~~~~ 581 (591)
-+|||-+|+|||-+
T Consensus 44 ~~LL~a~l~C~~rr 57 (59)
T 3j0g_M 44 DELLEAAVKCPGRK 57 (59)
T ss_dssp HHHHHHHHSCCSSS
T ss_pred HHHHHHHhcCcccc
Confidence 57999999999543
No 330
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=31.53 E-value=1.7e+02 Score=25.74 Aligned_cols=91 Identities=12% Similarity=0.199 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCCCchhHhhhHHHHHH---hCCHHHHHHHHHHHHhcCCchHHHHHhHHHH--HHHcCCHHHHHHHHHHh
Q 007721 463 LAVINQMLINDPGKSFLRFRQSLLLLR---LNCQKAAMRCLRLARNHSSSEHERLVYEGWI--LYDTGHREEALSRAEKS 537 (591)
Q Consensus 463 l~~~~~al~~~P~~~~~~~~~g~~l~~---l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~--l~~~g~~eeAl~~~e~a 537 (591)
..++++++..-..+...++.-=.+-.. .....++...|....+..=-..-|++|.+|+ +-..|++++|-+.|++.
T Consensus 48 ~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~G 127 (152)
T 4a1g_A 48 ITLLEHLMKEFLDKKKYHNDPRFISYCLKFAEYNSDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRG 127 (152)
T ss_dssp HHHHHHHHHHHTTCGGGTTCHHHHHHHHHHHTTBSCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccccccCCHHHHHHHHHHHHhcCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q ss_pred hcccccHHHHHHHHHH
Q 007721 538 ISIERTFEAFFLKAYI 553 (591)
Q Consensus 538 i~l~~~~~~~~~~~~~ 553 (591)
|+-+--...-..++|.
T Consensus 128 i~~~A~P~~rL~~~~~ 143 (152)
T 4a1g_A 128 IQNQAEPREFLQQQYR 143 (152)
T ss_dssp HHTTCBSHHHHHHHHH
T ss_pred HHcCCccHHHHHHHHH
No 331
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=31.52 E-value=20 Score=30.69 Aligned_cols=32 Identities=19% Similarity=0.029 Sum_probs=25.1
Q ss_pred HHhHHHHHHHHHHhChHHHHHHHHHHHHhhhH
Q 007721 158 IEDALILIDYGLEERATLLVASCLQVLLRELP 189 (591)
Q Consensus 158 ~~n~~~ll~~A~~~~~~~L~~~c~~~i~~n~~ 189 (591)
.+|+..++..|..++.+.|.+.|.+++.+++.
T Consensus 93 ~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~ 124 (145)
T 4eoz_A 93 DKMADDLLAAADKYALERLKVMCEDALCSNLS 124 (145)
T ss_dssp GGTHHHHHHHHHHTTCHHHHHHHHCC------
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC
Confidence 68999999999999999999999999987653
No 332
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=30.93 E-value=34 Score=28.60 Aligned_cols=31 Identities=10% Similarity=-0.020 Sum_probs=27.0
Q ss_pred cCCHHhHHHHHHHHHHhChHHHHHHHHHHHHh
Q 007721 155 VGDIEDALILIDYGLEERATLLVASCLQVLLR 186 (591)
Q Consensus 155 i~~~~n~~~ll~~A~~~~~~~L~~~c~~~i~~ 186 (591)
++ .+|+..++..|..+..+.|.+.|.+++..
T Consensus 87 i~-~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 87 LQ-PGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp EC-GGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred cC-HHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 56 79999999999999999999999988653
No 333
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=30.92 E-value=52 Score=26.70 Aligned_cols=33 Identities=9% Similarity=0.068 Sum_probs=28.3
Q ss_pred HhHHHHHHHhCCHHHHHHHHHHHHhcCCChHHH
Q 007721 356 KYRAVAKMEEGQIRAAISEIDRIIVFKLSVDCL 388 (591)
Q Consensus 356 ~~rg~~l~~l~~~~eAl~~~~~al~l~p~~~~~ 388 (591)
..+|..+...|++++|+..|-+||..-|+|..+
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~L 56 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQL 56 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHH
Confidence 458999999999999999999999998887543
No 334
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=29.62 E-value=48 Score=25.98 Aligned_cols=27 Identities=7% Similarity=-0.144 Sum_probs=20.0
Q ss_pred HhhhHHHHHHhCCHHHHHHHHHHHHhc
Q 007721 480 RFRQSLLLLRLNCQKAAMRCLRLARNH 506 (591)
Q Consensus 480 ~~~~g~~l~~l~~~~eA~~~~~~Al~l 506 (591)
+..+|.-..+.|++++|+..|..|++.
T Consensus 14 lv~~Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 14 YAILAVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 345556668889999888888887754
No 335
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=29.18 E-value=52 Score=26.05 Aligned_cols=25 Identities=16% Similarity=0.084 Sum_probs=17.8
Q ss_pred HhHHHHHHHcCCHHHHHHHHHHhhc
Q 007721 515 VYEGWILYDTGHREEALSRAEKSIS 539 (591)
Q Consensus 515 ~~~G~~l~~~g~~eeAl~~~e~ai~ 539 (591)
...+.-.-..|++++|+..|.+|+.
T Consensus 20 v~~Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 20 LKRAVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3444444667888888888888874
No 336
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=29.14 E-value=50 Score=25.86 Aligned_cols=23 Identities=17% Similarity=0.094 Sum_probs=17.0
Q ss_pred HHHHHHHcCCHHHHHHHHHHhhc
Q 007721 517 EGWILYDTGHREEALSRAEKSIS 539 (591)
Q Consensus 517 ~G~~l~~~g~~eeAl~~~e~ai~ 539 (591)
.+.-.-..|++++|+..|.+|+.
T Consensus 19 ~Av~~D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 19 KAIDLDTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHH
Confidence 33344566899999999998875
No 337
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=28.91 E-value=7.2e+02 Score=28.63 Aligned_cols=202 Identities=12% Similarity=0.010 Sum_probs=95.9
Q ss_pred HHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC-h--HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchhhhhhchHhHH
Q 007721 354 PYKYRAVAKMEEGQIRAAISEIDRIIVFKLS-V--DCLELRAWLFIAADDYESALRDTLALLALESNYMMFHGRVSGDHL 430 (591)
Q Consensus 354 ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~-~--~~~~~r~~~~~~~g~~~~A~~d~~~al~l~P~~~~~~~~~~~~~~ 430 (591)
+-..+|.+++..++ +++++.+..+|.-+.. . .+....|.++...|+-+....-+..+.+-..+. ..|. +..-
T Consensus 457 AaLGLGla~~GS~~-eev~e~L~~~L~dd~~~~~~~AalALGli~vGTgn~~ai~~LL~~~~e~~~e~---vrR~-aalg 531 (963)
T 4ady_A 457 ASLGIGLAAMGSAN-IEVYEALKEVLYNDSATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQETQHGN---ITRG-LAVG 531 (963)
T ss_dssp HHHHHHHHSTTCCC-HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCSCHH---HHHH-HHHH
T ss_pred HHHHHHHHhcCCCC-HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccCCHHHHHHHHHHHhccCcHH---HHHH-HHHH
Confidence 34456666665554 5677777777753332 1 223445666777777655555555555433322 1222 2222
Q ss_pred HHHHHhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhh----HHHHHHhCCHHHHHHHHHHHHhc
Q 007721 431 VKLLNHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQ----SLLLLRLNCQKAAMRCLRLARNH 506 (591)
Q Consensus 431 ~~~l~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~----g~~l~~l~~~~eA~~~~~~Al~l 506 (591)
++.+ ..++.+.++ .+-+.|..++ ++..++.- |.++...|....-.+.+..+..-
T Consensus 532 LGll--~~g~~e~~~-------------------~li~~L~~~~-dp~vRygaa~alglAyaGTGn~~aIq~LL~~~~~d 589 (963)
T 4ady_A 532 LALI--NYGRQELAD-------------------DLITKMLASD-ESLLRYGGAFTIALAYAGTGNNSAVKRLLHVAVSD 589 (963)
T ss_dssp HHHH--TTTCGGGGH-------------------HHHHHHHHCS-CHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHC
T ss_pred HHhh--hCCChHHHH-------------------HHHHHHHhCC-CHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhccC
Confidence 2222 222223332 2233333322 33333332 33334577776333366666665
Q ss_pred CCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHHHHHHHHHHhhhcCCCCCc-hhHHHHHHHHHhcCCCCCcccc
Q 007721 507 SSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFEAFFLKAYILADTNLDPES-STYVIQLLEEALRCPSDGLRKG 585 (591)
Q Consensus 507 ~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 585 (591)
..++....-..|..+...|+-+.+.+..+.-. -.-+...=+.-++||+=. +++. ...||++|+..++=+.+..|.|
T Consensus 590 ~~d~VRraAViaLGlI~~g~~e~v~rlv~~L~-~~~d~~VR~gAalALGli--~aGn~~~~aid~L~~L~~D~d~~Vrq~ 666 (963)
T 4ady_A 590 SNDDVRRAAVIALGFVLLRDYTTVPRIVQLLS-KSHNAHVRCGTAFALGIA--CAGKGLQSAIDVLDPLTKDPVDFVRQA 666 (963)
T ss_dssp SCHHHHHHHHHHHHHHTSSSCSSHHHHTTTGG-GCSCHHHHHHHHHHHHHH--TSSSCCHHHHHHHHHHHTCSSHHHHHH
T ss_pred CcHHHHHHHHHHHHhhccCCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHh--ccCCCcHHHHHHHHHHccCCCHHHHHH
Confidence 55555555555555555565433332222111 112222333334444443 3333 3578888888877666666654
No 338
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=28.89 E-value=1.2e+02 Score=24.38 Aligned_cols=56 Identities=21% Similarity=0.210 Sum_probs=44.8
Q ss_pred hhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHH-------HHcCCHHHHHHHHHHhhc
Q 007721 481 FRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWIL-------YDTGHREEALSRAEKSIS 539 (591)
Q Consensus 481 ~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l-------~~~g~~eeAl~~~e~ai~ 539 (591)
+..|..+...|++=||-+.++.+..-.|+ .+.....|.+. +..|+. |...+++|+.
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~~~-~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKATG-EERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhCCC-chHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 45777888889999999999999999965 66666677664 455787 8888888877
No 339
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=27.49 E-value=3.4e+02 Score=31.16 Aligned_cols=91 Identities=10% Similarity=0.016 Sum_probs=64.3
Q ss_pred hhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhc-c-ccc----------------
Q 007721 482 RQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSIS-I-ERT---------------- 543 (591)
Q Consensus 482 ~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~-l-~~~---------------- 543 (591)
....-+...|.++-|. .-+..-|.++-.-|.+|.+++.+|++++|...++||=. + .++
T Consensus 815 ~l~~~L~~~~~~~~a~----eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~ 890 (950)
T 4gq2_M 815 ELVEKLFLFKQYNACM----QLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKY 890 (950)
T ss_dssp HHHHHHHHTTCHHHHH----HHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHT
T ss_pred HHHHHHHHhcHHHHHH----HHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcc
Confidence 3556677788887443 45677778888889999999999999999999998753 2 111
Q ss_pred -----HHHHHHHHHHhhhcCCCCCchhHHHHHHHHHhcCCC
Q 007721 544 -----FEAFFLKAYILADTNLDPESSTYVIQLLEEALRCPS 579 (591)
Q Consensus 544 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (591)
...||++-..|-+. ...-.+||++-+-|+.+..
T Consensus 891 e~~~~~~~YY~hV~~LFE~---~~a~~~vi~fA~lAI~~~~ 928 (950)
T 4gq2_M 891 HHQNLLSCYYLHLSKKLFE---ESAYIDALEFSLLADASKE 928 (950)
T ss_dssp TTCSHHHHHHHHHHHHHHH---TTCHHHHHHHHHHHHHTCC
T ss_pred cccchhHHHHHHHHHHHHh---cCCHHHHHHHHHHHHhhcc
Confidence 11377777776663 4566778888777877643
No 340
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=27.32 E-value=6.2e+02 Score=29.01 Aligned_cols=111 Identities=14% Similarity=0.026 Sum_probs=70.6
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHh-cCCcchhhhhhchHh-HHHHHH
Q 007721 358 RAVAKMEEGQIRAAISEIDRIIVFKLS-VDCLELRAWLFIAADDYESALRDTLALLA-LESNYMMFHGRVSGD-HLVKLL 434 (591)
Q Consensus 358 rg~~l~~l~~~~eAl~~~~~al~l~p~-~~~~~~r~~~~~~~g~~~~A~~d~~~al~-l~P~~~~~~~~~~~~-~~~~~l 434 (591)
+...++..|+++-|.+ .+..-|. +..-|.+|.++...|++++|...|++|-. +.+.... .... ...+++
T Consensus 816 l~~~L~~~~~~~~a~e----L~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~----~~~~~~~~~ll 887 (950)
T 4gq2_M 816 LVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQ----FAVLREFQEIA 887 (950)
T ss_dssp HHHHHHHTTCHHHHHH----HGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCS----CGGGHHHHHHH
T ss_pred HHHHHHHhcHHHHHHH----HHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCccc----ccchhhhhhcc
Confidence 6677778888876542 4455563 44458899999999999999999999863 2221100 0000 000000
Q ss_pred HhhhcccCchhhhhhhhhccccccccchHHHHHHHHHcCCCCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCc
Q 007721 435 NHHVRSWSPADCWIKLYDRWSSVDDIGSLAVINQMLINDPGKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSS 509 (591)
Q Consensus 435 ~~~~~~~~~a~~~~~l~~~~~~~~~~~al~~~~~al~~~P~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~ 509 (591)
-..+.......+|.....++...|.++-+++..+.|++....
T Consensus 888 ---------------------------------~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~ 929 (950)
T 4gq2_M 888 ---------------------------------EKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKET 929 (950)
T ss_dssp ---------------------------------HHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCS
T ss_pred ---------------------------------CcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhccc
Confidence 001111112247778888899999999999999999976543
No 341
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=26.98 E-value=57 Score=26.17 Aligned_cols=21 Identities=19% Similarity=0.112 Sum_probs=15.0
Q ss_pred HHHHHcCCHHHHHHHHHHhhc
Q 007721 519 WILYDTGHREEALSRAEKSIS 539 (591)
Q Consensus 519 ~~l~~~g~~eeAl~~~e~ai~ 539 (591)
.-.-..|+|++|+..|.+|+.
T Consensus 23 ve~D~~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 23 VELDAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHH
Confidence 333556888888888888775
No 342
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=26.97 E-value=4.6e+02 Score=25.78 Aligned_cols=62 Identities=15% Similarity=0.011 Sum_probs=44.3
Q ss_pred CCchhHhhhHHHHHHhCCHHHHHHHHHHHH----------------h---cCCchHHHHHhHHHHH-HHcCCHHHHHHHH
Q 007721 475 GKSFLRFRQSLLLLRLNCQKAAMRCLRLAR----------------N---HSSSEHERLVYEGWIL-YDTGHREEALSRA 534 (591)
Q Consensus 475 ~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al----------------~---l~p~~~~a~~~~G~~l-~~~g~~eeAl~~~ 534 (591)
|++++|...|..+.+-|.+.+|...+-..- . -.|...+.+..|+.+- +.+|+..-|...+
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~RaVL~yL~l~n~~~A~~~~ 211 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFSRLVFNYLFISNISFAHESK 211 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 788999999999999999999998764221 2 3456667777777653 4567777666665
Q ss_pred HH
Q 007721 535 EK 536 (591)
Q Consensus 535 e~ 536 (591)
+.
T Consensus 212 ~~ 213 (312)
T 2wpv_A 212 DI 213 (312)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 343
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=25.66 E-value=2e+02 Score=24.68 Aligned_cols=83 Identities=8% Similarity=-0.015 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHhcCCCC--CCChhHHHHHHHHHhhhCh---------------HHHHHHHHHHHHhhcCCHHhHHHHHHH
Q 007721 105 VEGLRAVEVYTRTSRVD--LFCPGIVLELLSFANRFCC---------------EEMKSACDAHLASLVGDIEDALILIDY 167 (591)
Q Consensus 105 ~~~~~~ll~ylYtg~~~--~~~~~~v~~lL~~A~~~~i---------------~~L~~~C~~~L~~~i~~~~n~~~ll~~ 167 (591)
...++.+++-.=.+.++ .++...+..+++.+....- ..+..--.+|+ .++ .++++.++..
T Consensus 24 S~~ik~ml~~~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~--~vd-~~~l~eLi~A 100 (141)
T 1fs1_B 24 SVTIKTMLEDLGMDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFL--KVD-QGTLFELILA 100 (141)
T ss_dssp CHHHHHHHHHTCCSSEECTTCCHHHHHHHHHHHHHHTTCC-----------------HHHHHHT--CSC-HHHHHHHHHH
T ss_pred hHHHHHHHHhcCCCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHH--hCC-HHHHHHHHHH
Confidence 34556666532122333 1667777778888776541 12233334445 277 8999999999
Q ss_pred HHHhChHHHHHHHHHHHHhhhHh
Q 007721 168 GLEERATLLVASCLQVLLRELPS 190 (591)
Q Consensus 168 A~~~~~~~L~~~c~~~i~~n~~~ 190 (591)
|...+.+.|.+.|.+++...+..
T Consensus 101 AnyL~I~~Lldl~c~~vA~~ikg 123 (141)
T 1fs1_B 101 ANYLDIKGLLDVTCKTVANMIKG 123 (141)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHhhhHHHHHHHHHHHHHHcC
Confidence 99999999999999999876654
No 344
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=25.65 E-value=1.2e+02 Score=23.62 Aligned_cols=27 Identities=7% Similarity=-0.084 Sum_probs=20.1
Q ss_pred HhhhHHHHHHhCCHHHHHHHHHHHHhc
Q 007721 480 RFRQSLLLLRLNCQKAAMRCLRLARNH 506 (591)
Q Consensus 480 ~~~~g~~l~~l~~~~eA~~~~~~Al~l 506 (591)
+..+|.-....|++++|+..|..|+++
T Consensus 16 l~~~Av~~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 16 LVQKAIDLDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 345555667889999988888887764
No 345
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=25.07 E-value=59 Score=27.36 Aligned_cols=18 Identities=28% Similarity=0.379 Sum_probs=13.4
Q ss_pred HHcCCHHHHHHHHHHhhc
Q 007721 522 YDTGHREEALSRAEKSIS 539 (591)
Q Consensus 522 ~~~g~~eeAl~~~e~ai~ 539 (591)
-..|+|+||+..|.+|+.
T Consensus 29 D~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 29 DKAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHHTCHHHHHHHHHHHHH
T ss_pred HHccCHHHHHHHHHHHHH
Confidence 445788888888888775
No 346
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=24.50 E-value=5.8e+02 Score=26.17 Aligned_cols=99 Identities=20% Similarity=0.114 Sum_probs=59.0
Q ss_pred HHhHHHHHHHhCCHHHHHHHHHHHHhc----CCC---hHHHHHHHHHHHHcCCHHHHHHHHHHHHh-cCCcchhhhhhch
Q 007721 355 YKYRAVAKMEEGQIRAAISEIDRIIVF----KLS---VDCLELRAWLFIAADDYESALRDTLALLA-LESNYMMFHGRVS 426 (591)
Q Consensus 355 y~~rg~~l~~l~~~~eAl~~~~~al~l----~p~---~~~~~~r~~~~~~~g~~~~A~~d~~~al~-l~P~~~~~~~~~~ 426 (591)
...++.++.+.|++.+|...+.....- .+. .+.+.....++...+|+..|...++++.. ..+.+.+-.-+..
T Consensus 140 ~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~ 219 (445)
T 4b4t_P 140 TKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLE 219 (445)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHH
Confidence 356899999999999999988887531 221 22333345689999999999999999853 2222111112223
Q ss_pred HhHHHHHHHhhhcccC-chhhhhhhhhc
Q 007721 427 GDHLVKLLNHHVRSWS-PADCWIKLYDR 453 (591)
Q Consensus 427 ~~~~~~~l~~~~~~~~-~a~~~~~l~~~ 453 (591)
.....+.+..+.++|. .+.++..+++.
T Consensus 220 ~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 220 YYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 3344444444444443 34444444444
No 347
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=24.01 E-value=1.3e+02 Score=21.80 Aligned_cols=42 Identities=17% Similarity=0.100 Sum_probs=24.3
Q ss_pred HhCCHHHHHHHHHHHHhcCCchHHH-HHhHHHHHHHcCCHHHHH
Q 007721 489 RLNCQKAAMRCLRLARNHSSSEHER-LVYEGWILYDTGHREEAL 531 (591)
Q Consensus 489 ~l~~~~eA~~~~~~Al~l~p~~~~a-~~~~G~~l~~~g~~eeAl 531 (591)
-..|++||.-+. .-++..+...++ -.-+..-|-..|+|++|+
T Consensus 18 G~HcH~EA~tIA-~~L~~~~~~eE~v~mIr~~SLmNrG~Yq~Al 60 (61)
T 3ph0_C 18 GHHCHQEAASIA-DWLAQEECMAECVTLIRLSSLMNQGDYQRAL 60 (61)
T ss_dssp TTTCHHHHHHHH-HHHHTSSTTHHHHHHHHHHHHHHC-------
T ss_pred cchHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHccchHhHhh
Confidence 367899887764 456777775554 355677788999999987
No 348
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.89 E-value=87 Score=26.32 Aligned_cols=11 Identities=18% Similarity=0.190 Sum_probs=5.4
Q ss_pred HHHHHHHhcCC
Q 007721 406 RDTLALLALES 416 (591)
Q Consensus 406 ~d~~~al~l~P 416 (591)
..++++|.+..
T Consensus 50 ~eLe~Gl~I~~ 60 (116)
T 2dl1_A 50 GHLLRGISISS 60 (116)
T ss_dssp HHHHHHHSSCC
T ss_pred HHHHHhccccc
Confidence 34445555554
No 349
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=23.83 E-value=72 Score=25.19 Aligned_cols=27 Identities=11% Similarity=0.117 Sum_probs=19.1
Q ss_pred HhhhHHHHHHhCCHHHHHHHHHHHHhc
Q 007721 480 RFRQSLLLLRLNCQKAAMRCLRLARNH 506 (591)
Q Consensus 480 ~~~~g~~l~~l~~~~eA~~~~~~Al~l 506 (591)
...+|.-....|++++|+..|..|+++
T Consensus 19 lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 19 VLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 344555557788888888888887753
No 350
>2cmy_B Beta trypsin, veronica hederifolia trypsin inhibitor; acyl-enzyme intermediate, serine protease inhibitor, zymogen protease, digestion; 2.25A {Veronica hederifolia} SCOP: g.2.4.1
Probab=23.82 E-value=19 Score=22.20 Aligned_cols=22 Identities=18% Similarity=0.341 Sum_probs=16.9
Q ss_pred HHHHHHHHHhChHHHHHHHHHH
Q 007721 162 LILIDYGLEERATLLVASCLQV 183 (591)
Q Consensus 162 ~~ll~~A~~~~~~~L~~~c~~~ 183 (591)
+.++.+|+.|+.++|...|+.-
T Consensus 7 ckvmcyaqrhsspellrrcldn 28 (34)
T 2cmy_B 7 CKVMCYAQRHSSPELLRRCLDN 28 (34)
T ss_dssp CHHHHHHBC--CCHHHHHHHHH
T ss_pred hhHHHHHhhcCCHHHHHHHHHh
Confidence 4678899999999999999864
No 351
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=23.74 E-value=5.3e+02 Score=25.34 Aligned_cols=41 Identities=10% Similarity=-0.231 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHH
Q 007721 495 AAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAE 535 (591)
Q Consensus 495 eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e 535 (591)
+|+.+-.+.=...--+++.|...|..++..|++.+|...+=
T Consensus 118 ~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 118 GMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp HHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 45555444322233478899999999999999999988774
No 352
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=23.69 E-value=12 Score=31.85 Aligned_cols=33 Identities=9% Similarity=0.047 Sum_probs=22.9
Q ss_pred hcCCHHhHHHHHHHHHHhChHHHHHHHHHHHHhh
Q 007721 154 LVGDIEDALILIDYGLEERATLLVASCLQVLLRE 187 (591)
Q Consensus 154 ~i~~~~n~~~ll~~A~~~~~~~L~~~c~~~i~~n 187 (591)
.++ .+|+..++..|..++.+.|.+.|.+|+.+.
T Consensus 95 ~i~-~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 95 SMN-VGDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp ECC-TTTHHHHHHHHHHTTBTTSSCC--------
T ss_pred ccC-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 356 689999999999999999999999998765
No 353
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=23.46 E-value=1.8e+02 Score=26.26 Aligned_cols=66 Identities=11% Similarity=-0.046 Sum_probs=43.9
Q ss_pred CCchhHhhhHHHHHHhCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHcCCHHHHHHHHHHhhcccccHHHHH
Q 007721 475 GKSFLRFRQSLLLLRLNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDTGHREEALSRAEKSISIERTFEAFF 548 (591)
Q Consensus 475 ~~~~~~~~~g~~l~~l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~g~~eeAl~~~e~ai~l~~~~~~~~ 548 (591)
++..-|.++|..=+..|+++=|.++|+++-. +..+..++.-+|+.++=....+.|..-.-...||.
T Consensus 32 ~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D--------~~~L~~Ly~~tg~~e~L~kla~iA~~~g~~n~af~ 97 (177)
T 3mkq_B 32 NDSITWERLIQEALAQGNASLAEMIYQTQHS--------FDKLSFLYLVTGDVNKLSKMQNIAQTREDFGSMLL 97 (177)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTC--------HHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCChHHHHHHHHHhCC--------HHHHHHHHHHhCCHHHHHHHHHHHHHCccHHHHHH
Confidence 5667788888888888888888888887542 23445566667887766666666655444444443
No 354
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=23.07 E-value=3.1e+02 Score=25.72 Aligned_cols=48 Identities=13% Similarity=0.174 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHhcCCchHHHHHhHHHHH--HHcCCHHHHHHHHHHhhcc
Q 007721 493 QKAAMRCLRLARNHSSSEHERLVYEGWIL--YDTGHREEALSRAEKSISI 540 (591)
Q Consensus 493 ~~eA~~~~~~Al~l~p~~~~a~~~~G~~l--~~~g~~eeAl~~~e~ai~l 540 (591)
..++...|....+..=-..-|++|.+|+. -..|++.+|-..|++.|+-
T Consensus 130 ~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~ 179 (223)
T 4aez_C 130 IDEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRM 179 (223)
T ss_dssp CSCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 35678889888888877788888888874 4569999999999999985
No 355
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=22.56 E-value=1.2e+02 Score=23.19 Aligned_cols=29 Identities=14% Similarity=-0.047 Sum_probs=15.8
Q ss_pred hHHHHHHhCCHHHHHHHHHHHHhcCCchH
Q 007721 483 QSLLLLRLNCQKAAMRCLRLARNHSSSEH 511 (591)
Q Consensus 483 ~g~~l~~l~~~~eA~~~~~~Al~l~p~~~ 511 (591)
+|+.|...|..++|...+-+|+..-|+=+
T Consensus 23 ~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~ 51 (73)
T 3ax2_A 23 LGEELLAQGDYEKGVDHLTNAIAVCGQPQ 51 (73)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCSSCH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcCCHH
Confidence 45555555555555555555555555433
No 356
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=22.55 E-value=1.6e+02 Score=30.53 Aligned_cols=43 Identities=14% Similarity=0.179 Sum_probs=31.8
Q ss_pred HHHHHHHHHH-----cCCCChHHHHhHHHHHHHhCCHHHHHHHHHHHH
Q 007721 337 KIVDLNYASE-----LDPTLSFPYKYRAVAKMEEGQIRAAISEIDRII 379 (591)
Q Consensus 337 A~~dl~~Ai~-----LdP~~~~ay~~rg~~l~~l~~~~eAl~~~~~al 379 (591)
.++-|++||. ++-.+.++|.++|..+.+.+++.+|+..+..|-
T Consensus 283 ~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa 330 (489)
T 4gq4_A 283 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTA 330 (489)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhh
Confidence 3444555554 666778888888888888888888888887765
No 357
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=21.72 E-value=5.1e+02 Score=24.42 Aligned_cols=40 Identities=5% Similarity=-0.095 Sum_probs=30.2
Q ss_pred HHHHhHHHHHHHhCCHHHHHHHHHHHHhcCCC--hHHHHHHH
Q 007721 353 FPYKYRAVAKMEEGQIRAAISEIDRIIVFKLS--VDCLELRA 392 (591)
Q Consensus 353 ~ay~~rg~~l~~l~~~~eAl~~~~~al~l~p~--~~~~~~r~ 392 (591)
.-..++|.+.-+.+||++.+....++++.++. .+--++..
T Consensus 9 e~~v~~AklaeqaeRyddM~~~mk~v~~~~~eLs~EERnLLS 50 (236)
T 3iqu_A 9 ASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLS 50 (236)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHH
Confidence 34567788888899999999999999999875 44334333
No 358
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=21.71 E-value=5.4e+02 Score=24.66 Aligned_cols=69 Identities=23% Similarity=0.301 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHh----cCCchHHHHHhHHHH------HHH-cCCHHHHHHHHHHhhcccccHHHHHHHHHHhhhcCCCC
Q 007721 493 QKAAMRCLRLARN----HSSSEHERLVYEGWI------LYD-TGHREEALSRAEKSISIERTFEAFFLKAYILADTNLDP 561 (591)
Q Consensus 493 ~~eA~~~~~~Al~----l~p~~~~a~~~~G~~------l~~-~g~~eeAl~~~e~ai~l~~~~~~~~~~~~~~~~~~~~~ 561 (591)
.+.|+..|+.|.. +.|.++-. +|++ +|. +++-++|.....+|+ -.|++--|+ |+-
T Consensus 172 ~e~a~~aY~~A~~iA~~L~pthPir---LGLaLNfSVFyYEiln~~~~Ac~lAk~Af----------d~Ai~eld~-L~e 237 (260)
T 2npm_A 172 AEDALKAYKDATVVAKDLEPTHPIR---LGLALNFSVFHYEILNEPRAAIDMAKEAF----------EMAIEQLDK-LSE 237 (260)
T ss_dssp HHHHHHHHHHHHHHHTTSCTTCHHH---HHHHHHHHHHHHHTSCCHHHHHHHHHHHH----------HHHHTTGGG-CCT
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcHH---HHHHHHHHHHHHHHcCCHHHHHHHHHHHH----------HHHHHhhhc-CCh
Confidence 3567888888885 67777743 4444 333 799999999988874 455555553 443
Q ss_pred C---chhHHHHHHHHHh
Q 007721 562 E---SSTYVIQLLEEAL 575 (591)
Q Consensus 562 ~---~~~~~~~~~~~~~ 575 (591)
+ -|+.++|||-+=|
T Consensus 238 esykDstlImqLLRDNL 254 (260)
T 2npm_A 238 DCYKDSTLIMQLLRDNL 254 (260)
T ss_dssp TTHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHH
Confidence 3 2678899997754
No 359
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=21.31 E-value=84 Score=25.13 Aligned_cols=43 Identities=14% Similarity=0.111 Sum_probs=25.5
Q ss_pred hhhHHHHHHhCCHHHHHHHHHHHHh-------cCCchHHHHHhHHHHHHH
Q 007721 481 FRQSLLLLRLNCQKAAMRCLRLARN-------HSSSEHERLVYEGWILYD 523 (591)
Q Consensus 481 ~~~g~~l~~l~~~~eA~~~~~~Al~-------l~p~~~~a~~~~G~~l~~ 523 (591)
+.+|.-....|++++|+..|..|++ ..|+....-..+.-+--.
T Consensus 19 v~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk~e~~~~~k~~l~~K~~eY 68 (93)
T 1wfd_A 19 LKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGY 68 (93)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 4555666777888888877776664 355544443344444333
No 360
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=21.03 E-value=82 Score=26.46 Aligned_cols=26 Identities=8% Similarity=-0.077 Sum_probs=20.1
Q ss_pred hhhHHHHHHhCCHHHHHHHHHHHHhc
Q 007721 481 FRQSLLLLRLNCQKAAMRCLRLARNH 506 (591)
Q Consensus 481 ~~~g~~l~~l~~~~eA~~~~~~Al~l 506 (591)
..+|.-....|++++|+..|..|+++
T Consensus 22 v~~Ave~D~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 22 ASKAAQEDKAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 55666668889999999988888763
No 361
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=20.64 E-value=2.9e+02 Score=28.65 Aligned_cols=28 Identities=14% Similarity=0.019 Sum_probs=15.7
Q ss_pred hHHHHHhHHHHHHHcCCHHHHHHHHHHh
Q 007721 510 EHERLVYEGWILYDTGHREEALSRAEKS 537 (591)
Q Consensus 510 ~~~a~~~~G~~l~~~g~~eeAl~~~e~a 537 (591)
+.+=|.++|-.+|..+++.||++.+-.|
T Consensus 317 HvYPYtYlgGy~yR~~~~reAl~~WA~A 344 (550)
T 3u84_A 317 HIYPYMYLAGYHCRNRNVREALQAWADT 344 (550)
T ss_dssp CSHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CccceeecchhhhhcchHHHHHHHHHHH
Confidence 3444555666666666666665554444
No 362
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=20.38 E-value=2.9e+02 Score=24.58 Aligned_cols=91 Identities=9% Similarity=-0.030 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCCCchhHhhhHHHHHH---hCCHHHHHHHHHHHHhcCCchHHHHHhHHHHHHHc--CCHHHHHHHHHHh
Q 007721 463 LAVINQMLINDPGKSFLRFRQSLLLLR---LNCQKAAMRCLRLARNHSSSEHERLVYEGWILYDT--GHREEALSRAEKS 537 (591)
Q Consensus 463 l~~~~~al~~~P~~~~~~~~~g~~l~~---l~~~~eA~~~~~~Al~l~p~~~~a~~~~G~~l~~~--g~~eeAl~~~e~a 537 (591)
..++++++..--.+..+++.-=.+-.. .....++...|....+..=-..-|++|.+|+.+.. |++.+|-..|++.
T Consensus 43 ~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~~~p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~G 122 (164)
T 2wvi_A 43 STLLERAVEALQGEKRYYSDPRFLNLWLKLGRLCNEPLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEG 122 (164)
T ss_dssp HHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHHHCSCHHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhhhccCHHHHHHHHHHHHhcCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q ss_pred hcccccHHHHHHHHHH
Q 007721 538 ISIERTFEAFFLKAYI 553 (591)
Q Consensus 538 i~l~~~~~~~~~~~~~ 553 (591)
|+-+--...-..+++.
T Consensus 123 i~~~A~P~~~L~~~~~ 138 (164)
T 2wvi_A 123 IQQKAEPLERLQSQHR 138 (164)
T ss_dssp HHTTCBSHHHHHHHHH
T ss_pred HHcCCCcHHHHHHHHH
Done!