Query 007728
Match_columns 591
No_of_seqs 168 out of 916
Neff 7.2
Searched_HMMs 46136
Date Thu Mar 28 14:32:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007728.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007728hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02620 indole-3-acetic acid- 100.0 1E-131 2E-136 1085.8 57.8 575 15-590 17-603 (612)
2 PLN02247 indole-3-acetic acid- 100.0 5E-128 1E-132 1059.6 56.6 573 17-590 8-600 (606)
3 PLN02249 indole-3-acetic acid- 100.0 2E-121 4E-126 1016.4 58.1 573 13-590 14-592 (597)
4 PF03321 GH3: GH3 auxin-respon 100.0 2E-110 3E-115 928.4 42.4 512 22-570 2-527 (528)
5 COG1541 PaaK Coenzyme F390 syn 100.0 2.5E-32 5.5E-37 289.6 29.7 398 25-567 14-435 (438)
6 TIGR03335 F390_ftsA coenzyme F 100.0 2.9E-28 6.3E-33 266.8 29.1 391 30-543 11-431 (445)
7 TIGR02155 PA_CoA_ligase phenyl 99.9 1.5E-25 3.2E-30 243.5 30.8 388 30-543 5-410 (422)
8 TIGR02304 aden_form_hyp probab 99.9 1.1E-20 2.5E-25 204.6 26.5 320 30-488 21-376 (430)
9 COG1021 EntE Peptide arylation 99.7 5.1E-16 1.1E-20 160.2 13.4 131 299-455 303-458 (542)
10 PTZ00237 acetyl-CoA synthetase 99.6 6.6E-13 1.4E-17 152.4 27.3 233 300-575 379-643 (647)
11 TIGR02188 Ac_CoA_lig_AcsA acet 99.5 7.5E-12 1.6E-16 142.8 33.5 229 300-575 357-624 (625)
12 PRK00174 acetyl-CoA synthetase 99.5 7E-12 1.5E-16 143.4 33.0 232 301-579 367-635 (637)
13 PRK06334 long chain fatty acid 99.5 7.8E-13 1.7E-17 148.4 22.7 131 303-456 301-455 (539)
14 PRK07529 AMP-binding domain pr 99.5 3.5E-12 7.5E-17 146.0 26.4 135 301-455 333-489 (632)
15 PRK06060 acyl-CoA synthetase; 99.5 1.1E-11 2.5E-16 143.5 28.0 130 302-455 261-409 (705)
16 PLN02654 acetate-CoA ligase 99.5 7.1E-11 1.5E-15 136.1 33.9 229 299-575 395-662 (666)
17 TIGR02316 propion_prpE propion 99.5 4.1E-11 8.9E-16 137.0 31.5 132 300-455 353-516 (628)
18 PRK10524 prpE propionyl-CoA sy 99.5 3.3E-11 7.2E-16 137.6 30.4 132 300-455 354-517 (629)
19 PRK07788 acyl-CoA synthetase; 99.5 7.4E-12 1.6E-16 140.4 24.3 129 302-455 324-471 (549)
20 PRK05605 long-chain-fatty-acid 99.5 6.9E-12 1.5E-16 141.4 24.0 131 302-455 337-489 (573)
21 PRK03584 acetoacetyl-CoA synth 99.5 5.1E-11 1.1E-15 136.9 31.0 230 299-575 381-648 (655)
22 PRK04319 acetyl-CoA synthetase 99.4 2.5E-11 5.3E-16 137.0 27.4 130 302-456 324-477 (570)
23 PRK06187 long-chain-fatty-acid 99.4 2.7E-11 5.8E-16 133.9 26.5 128 303-455 283-439 (521)
24 PLN02574 4-coumarate--CoA liga 99.4 2.7E-11 5.9E-16 136.4 26.5 133 302-455 320-474 (560)
25 PRK09274 peptide synthase; Pro 99.4 2.2E-11 4.7E-16 136.6 25.4 139 303-456 290-465 (552)
26 PRK13295 cyclohexanecarboxylat 99.4 5.5E-12 1.2E-16 141.5 20.2 128 303-455 314-463 (547)
27 PRK06155 crotonobetaine/carnit 99.4 6.7E-12 1.5E-16 140.8 20.3 128 303-455 296-444 (542)
28 PRK05677 long-chain-fatty-acid 99.4 2E-11 4.4E-16 137.4 24.2 129 302-455 327-477 (562)
29 PRK07656 long-chain-fatty-acid 99.4 3.4E-11 7.5E-16 133.1 25.4 130 301-455 281-436 (513)
30 PRK07514 malonyl-CoA synthase; 99.4 3.7E-11 8E-16 132.8 25.6 129 303-455 271-421 (504)
31 COG0365 Acs Acyl-coenzyme A sy 99.4 6.3E-11 1.4E-15 131.2 26.5 131 299-456 288-441 (528)
32 TIGR01734 D-ala-DACP-lig D-ala 99.4 7.5E-11 1.6E-15 130.3 26.9 129 303-456 260-418 (502)
33 PRK09088 acyl-CoA synthetase; 99.4 2.4E-11 5.2E-16 133.9 22.7 131 301-455 252-405 (488)
34 TIGR03205 pimA dicarboxylate-- 99.4 6.9E-11 1.5E-15 132.3 26.5 131 302-455 313-465 (541)
35 PLN02860 o-succinylbenzoate-Co 99.4 1.1E-11 2.5E-16 139.6 19.9 144 302-455 289-458 (563)
36 PLN03051 acyl-activating enzym 99.4 9.7E-11 2.1E-15 130.1 27.0 130 302-455 237-401 (499)
37 PRK05852 acyl-CoA synthetase; 99.4 1E-10 2.2E-15 130.8 26.4 130 303-455 297-452 (534)
38 PRK04813 D-alanine--poly(phosp 99.4 7.9E-11 1.7E-15 129.9 25.2 128 303-455 262-419 (503)
39 PRK06164 acyl-CoA synthetase; 99.4 8.3E-11 1.8E-15 131.5 25.7 110 324-455 319-450 (540)
40 COG0318 CaiC Acyl-CoA syntheta 99.4 1.5E-11 3.3E-16 138.0 19.5 130 303-456 293-446 (534)
41 TIGR01217 ac_ac_CoA_syn acetoa 99.4 3.9E-10 8.4E-15 129.7 30.4 229 299-575 382-646 (652)
42 PRK13382 acyl-CoA synthetase; 99.4 1E-10 2.2E-15 131.0 24.9 128 303-455 314-460 (537)
43 PRK08314 long-chain-fatty-acid 99.4 2.2E-11 4.7E-16 136.2 19.4 129 303-455 307-460 (546)
44 TIGR01733 AA-adenyl-dom amino 99.4 2.4E-11 5.2E-16 130.2 18.8 129 303-455 236-399 (408)
45 PRK07638 acyl-CoA synthetase; 99.4 2.7E-11 5.9E-16 133.6 19.4 129 303-455 256-405 (487)
46 PLN02736 long-chain acyl-CoA s 99.4 1.2E-11 2.5E-16 142.2 16.9 132 303-455 378-532 (651)
47 PRK06145 acyl-CoA synthetase; 99.4 3.2E-11 7E-16 133.1 19.9 130 303-456 266-418 (497)
48 TIGR03208 cyc_hxne_CoA_lg cycl 99.4 3.6E-11 7.7E-16 134.5 20.3 127 303-455 312-461 (538)
49 PRK10946 entE enterobactin syn 99.4 4.2E-11 9.1E-16 134.1 20.8 128 303-455 302-453 (536)
50 PRK06839 acyl-CoA synthetase; 99.3 2.3E-10 5E-15 126.1 26.1 128 302-455 265-415 (496)
51 PRK13383 acyl-CoA synthetase; 99.3 3E-10 6.4E-15 126.5 27.1 128 303-455 294-440 (516)
52 PLN02246 4-coumarate--CoA liga 99.3 1.5E-10 3.3E-15 129.4 24.9 131 302-455 299-456 (537)
53 PRK08316 acyl-CoA synthetase; 99.3 4.5E-11 9.6E-16 132.5 19.9 131 301-455 286-439 (523)
54 PRK07786 long-chain-fatty-acid 99.3 1.8E-10 4E-15 129.0 24.8 129 303-455 292-443 (542)
55 TIGR02275 DHB_AMP_lig 2,3-dihy 99.3 7.1E-11 1.5E-15 131.8 21.2 129 302-455 300-452 (527)
56 PLN02614 long-chain acyl-CoA s 99.3 1.5E-11 3.3E-16 141.6 16.2 132 303-455 388-541 (666)
57 PLN02330 4-coumarate--CoA liga 99.3 1.4E-10 3.1E-15 130.0 23.5 130 303-455 305-461 (546)
58 PRK12583 acyl-CoA synthetase; 99.3 4.9E-10 1.1E-14 125.6 27.7 130 302-455 318-472 (558)
59 PRK12467 peptide synthase; Pro 99.3 3.7E-11 8.1E-16 161.1 21.3 129 303-455 3353-3515(3956)
60 PRK08974 long-chain-fatty-acid 99.3 2.3E-10 5E-15 128.6 24.6 129 302-455 326-476 (560)
61 TIGR03098 ligase_PEP_1 acyl-Co 99.3 2.8E-10 6E-15 126.0 24.9 130 302-455 275-438 (515)
62 PRK12406 long-chain-fatty-acid 99.3 8.7E-10 1.9E-14 122.4 28.5 129 302-455 272-423 (509)
63 PRK08633 2-acyl-glycerophospho 99.3 5.2E-11 1.1E-15 144.7 20.1 130 303-456 900-1064(1146)
64 PRK08315 AMP-binding domain pr 99.3 4.3E-10 9.3E-15 126.2 25.8 131 302-455 316-471 (559)
65 PRK07867 acyl-CoA synthetase; 99.3 9.4E-11 2E-15 131.3 20.2 127 303-455 269-425 (529)
66 PRK07059 Long-chain-fatty-acid 99.3 8E-11 1.7E-15 132.3 19.4 130 301-455 327-479 (557)
67 PRK06710 long-chain-fatty-acid 99.3 4E-11 8.7E-16 134.9 16.9 131 302-456 324-476 (563)
68 PRK07470 acyl-CoA synthetase; 99.3 6.5E-11 1.4E-15 132.0 18.3 128 303-455 282-438 (528)
69 PRK07769 long-chain-fatty-acid 99.3 5.6E-10 1.2E-14 127.7 26.2 63 389-456 412-508 (631)
70 PLN03052 acetate--CoA ligase; 99.3 6.6E-10 1.4E-14 129.3 27.1 132 300-455 470-633 (728)
71 PRK07768 long-chain-fatty-acid 99.3 6.9E-10 1.5E-14 124.3 26.3 64 389-456 380-459 (545)
72 PRK10252 entF enterobactin syn 99.3 5.4E-11 1.2E-15 146.6 18.9 129 303-456 719-882 (1296)
73 PRK07787 acyl-CoA synthetase; 99.3 1.7E-10 3.8E-15 126.8 20.8 129 303-455 243-395 (471)
74 PRK12467 peptide synthase; Pro 99.3 1.2E-10 2.6E-15 156.4 23.1 129 303-455 773-934 (3956)
75 PRK12492 long-chain-fatty-acid 99.3 1.4E-10 3.1E-15 130.5 20.3 130 301-455 333-485 (562)
76 PLN02387 long-chain-fatty-acid 99.3 3E-11 6.4E-16 139.9 15.0 132 303-455 422-580 (696)
77 PRK06188 acyl-CoA synthetase; 99.3 1E-09 2.3E-14 122.1 26.4 129 302-455 282-437 (524)
78 TIGR03443 alpha_am_amid L-amin 99.3 8.9E-11 1.9E-15 145.8 18.5 131 303-455 531-722 (1389)
79 PLN02861 long-chain-fatty-acid 99.2 6.8E-11 1.5E-15 136.1 15.3 132 303-455 385-538 (660)
80 KOG1176 Acyl-CoA synthetase [L 99.2 1.9E-10 4.2E-15 127.9 18.0 132 300-455 298-452 (537)
81 PRK09192 acyl-CoA synthetase; 99.2 2.4E-09 5.2E-14 121.2 27.3 63 389-456 405-483 (579)
82 PRK08043 bifunctional acyl-[ac 99.2 3.1E-10 6.6E-15 131.9 20.4 126 302-456 480-636 (718)
83 KOG1175 Acyl-CoA synthetase [L 99.2 1.8E-09 3.9E-14 120.6 24.7 232 301-577 359-624 (626)
84 PRK08751 putative long-chain f 99.2 3.6E-10 7.7E-15 127.1 19.3 132 302-456 330-482 (560)
85 PTZ00342 acyl-CoA synthetase; 99.2 7.7E-10 1.7E-14 128.7 22.6 130 303-455 463-615 (746)
86 PRK05851 long-chain-fatty-acid 99.2 5.2E-10 1.1E-14 125.0 19.9 62 390-456 367-440 (525)
87 PRK08279 long-chain-acyl-CoA s 99.2 4.6E-10 9.9E-15 127.5 19.7 143 303-455 316-483 (600)
88 PRK12316 peptide synthase; Pro 99.2 2.8E-10 6.2E-15 155.5 20.8 129 303-455 2263-2425(5163)
89 PRK03640 O-succinylbenzoic aci 99.2 4.8E-10 1E-14 123.2 18.4 126 303-455 256-404 (483)
90 PRK13391 acyl-CoA synthetase; 99.2 2.4E-09 5.3E-14 118.9 24.2 128 302-455 276-426 (511)
91 PRK08276 long-chain-fatty-acid 99.2 2.8E-09 6.2E-14 117.9 24.6 129 300-455 261-413 (502)
92 PRK05850 acyl-CoA synthetase; 99.2 8.6E-09 1.9E-13 116.4 28.7 63 389-456 391-481 (578)
93 PRK05857 acyl-CoA synthetase; 99.2 6.5E-10 1.4E-14 124.7 19.5 132 303-455 288-446 (540)
94 PRK12476 putative fatty-acid-- 99.2 3.1E-09 6.7E-14 121.2 25.2 63 389-456 423-520 (612)
95 PRK12316 peptide synthase; Pro 99.2 1.4E-10 3.1E-15 158.3 16.5 129 303-455 772-930 (5163)
96 PRK06087 short chain acyl-CoA 99.2 1E-09 2.2E-14 123.0 20.6 128 302-455 303-454 (547)
97 PRK13388 acyl-CoA synthetase; 99.2 1E-09 2.2E-14 123.2 20.4 136 303-455 267-424 (540)
98 PRK05620 long-chain-fatty-acid 99.2 5.9E-09 1.3E-13 117.9 26.6 131 303-455 300-474 (576)
99 PRK08008 caiC putative crotono 99.2 8.6E-10 1.9E-14 122.5 19.2 128 303-455 290-442 (517)
100 TIGR02262 benz_CoA_lig benzoat 99.2 4.7E-09 1E-13 116.4 24.9 128 303-455 280-428 (508)
101 PRK13390 acyl-CoA synthetase; 99.2 3.4E-09 7.3E-14 117.4 23.4 127 303-455 272-423 (501)
102 PRK05691 peptide synthase; Val 99.2 8.3E-10 1.8E-14 149.5 21.8 129 303-455 1390-1549(4334)
103 PRK06178 acyl-CoA synthetase; 99.2 3.8E-09 8.2E-14 119.0 23.6 121 312-455 341-486 (567)
104 PLN03102 acyl-activating enzym 99.2 1.5E-09 3.3E-14 122.9 19.9 59 393-455 390-464 (579)
105 PRK06814 acylglycerophosphoeth 99.1 1.2E-09 2.7E-14 133.1 20.2 126 301-455 907-1054(1140)
106 PRK05691 peptide synthase; Val 99.1 1.5E-09 3.2E-14 147.2 22.3 129 303-455 3985-4146(4334)
107 PRK08308 acyl-CoA synthetase; 99.1 1.7E-09 3.6E-14 117.2 18.4 58 392-455 278-335 (414)
108 TIGR01923 menE O-succinylbenzo 99.1 1.6E-09 3.5E-14 117.4 17.9 122 303-455 221-364 (436)
109 PLN02430 long-chain-fatty-acid 99.1 1.6E-09 3.4E-14 124.9 18.0 130 303-455 385-538 (660)
110 PRK08180 feruloyl-CoA synthase 99.1 2.4E-09 5.3E-14 122.1 19.0 126 303-455 336-491 (614)
111 PTZ00216 acyl-CoA synthetase; 99.1 8.3E-10 1.8E-14 128.0 15.4 129 303-455 430-581 (700)
112 PF00501 AMP-binding: AMP-bind 99.1 1.2E-09 2.6E-14 117.6 15.2 115 303-440 279-417 (417)
113 COG1022 FAA1 Long-chain acyl-C 99.1 2.4E-09 5.2E-14 120.4 17.6 132 303-475 355-506 (613)
114 PRK12582 acyl-CoA synthetase; 99.1 1.8E-09 3.8E-14 123.5 16.7 125 303-454 348-502 (624)
115 KOG1177 Long chain fatty acid 99.1 1E-09 2.2E-14 116.4 13.5 134 299-455 348-505 (596)
116 PRK07798 acyl-CoA synthetase; 99.0 8.4E-09 1.8E-13 114.5 19.6 131 302-455 297-452 (533)
117 PRK07008 long-chain-fatty-acid 99.0 9.8E-09 2.1E-13 115.1 20.2 128 303-455 295-453 (539)
118 PRK07445 O-succinylbenzoic aci 99.0 4.4E-09 9.5E-14 115.7 16.3 60 392-455 298-368 (452)
119 PRK07824 O-succinylbenzoic aci 99.0 3.2E-08 6.8E-13 105.0 22.1 43 408-455 235-277 (358)
120 PRK06018 putative acyl-CoA syn 99.0 1.7E-08 3.8E-13 113.1 18.7 129 303-455 296-454 (542)
121 KOG1256 Long-chain acyl-CoA sy 99.0 1.9E-08 4.1E-13 112.6 17.7 134 295-455 416-572 (691)
122 PLN02479 acetate-CoA ligase 98.9 3.7E-08 8.1E-13 111.2 19.5 58 394-455 401-474 (567)
123 PRK08162 acyl-CoA synthetase; 98.9 4.8E-08 1E-12 109.4 19.8 58 394-455 387-460 (545)
124 PRK07868 acyl-CoA synthetase; 98.9 8.4E-08 1.8E-12 115.5 20.3 140 302-455 721-880 (994)
125 PRK09029 O-succinylbenzoic aci 98.8 1.1E-07 2.4E-12 104.1 18.0 43 408-455 333-375 (458)
126 KOG1179 Very long-chain acyl-C 98.7 1.5E-06 3.2E-11 94.6 21.6 232 303-564 359-623 (649)
127 TIGR02372 4_coum_CoA_lig 4-cou 98.7 2.6E-07 5.7E-12 99.7 14.7 44 408-455 276-319 (386)
128 KOG1180 Acyl-CoA synthetase [L 98.6 5.4E-06 1.2E-10 90.1 20.8 145 303-476 404-573 (678)
129 PF04443 LuxE: Acyl-protein sy 98.4 1.8E-05 3.8E-10 84.7 17.8 82 32-127 28-116 (365)
130 COG1020 EntF Non-ribosomal pep 97.5 0.0036 7.8E-08 71.8 17.4 133 299-455 483-640 (642)
131 PTZ00297 pantothenate kinase; 96.5 0.07 1.5E-06 66.6 17.4 54 395-455 825-881 (1452)
132 PF14535 AMP-binding_C_2: AMP- 95.2 0.061 1.3E-06 46.3 6.8 84 441-543 1-84 (96)
133 PRK09188 serine/threonine prot 89.1 0.48 1E-05 50.9 4.7 39 408-455 210-251 (365)
134 KOG1178 Non-ribosomal peptide 64.4 4.5 9.7E-05 48.9 2.5 45 408-456 455-499 (1032)
135 COG2139 RPL21A Ribosomal prote 39.1 22 0.00048 30.5 2.0 37 406-442 30-69 (98)
136 cd04931 ACT_PAH ACT domain of 33.7 2E+02 0.0043 24.4 7.1 40 446-490 25-64 (90)
137 PF01797 Y1_Tnp: Transposase I 33.0 1.4E+02 0.0031 25.9 6.5 101 429-547 8-117 (121)
138 PRK04306 50S ribosomal protein 31.7 31 0.00067 29.9 1.8 36 407-442 33-71 (98)
139 PF07311 Dodecin: Dodecin; In 31.3 1.6E+02 0.0036 23.6 5.7 48 443-491 14-62 (66)
140 PF11454 DUF3016: Protein of u 30.7 1E+02 0.0023 28.6 5.2 55 390-446 47-111 (141)
141 PF09926 DUF2158: Uncharacteri 29.5 52 0.0011 25.2 2.5 19 409-430 1-19 (53)
142 PTZ00189 60S ribosomal protein 29.5 33 0.00072 32.3 1.8 35 408-442 33-70 (160)
143 PLN00190 60S ribosomal protein 23.8 48 0.001 31.2 1.7 36 407-442 32-70 (158)
144 cd04866 LigD_Pol_like_3 LigD_P 22.2 55 0.0012 32.7 1.9 50 95-145 121-172 (223)
145 COG5475 Uncharacterized small 21.6 99 0.0022 23.9 2.7 24 409-435 5-28 (60)
146 PRK11899 prephenate dehydratas 21.2 5.5E+02 0.012 26.6 9.1 41 446-491 205-245 (279)
No 1
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=1.1e-131 Score=1085.75 Aligned_cols=575 Identities=58% Similarity=1.022 Sum_probs=539.1
Q ss_pred cchhhHHHHHHHHHHHHcHHHHHHHHHHHHHHhcCCChhhhhcCCCCCCCHHHHhhcCCCcccccccHHHHHHhcCCCcc
Q 007728 15 VSEKDAKALQYIEEITRNAATFQETVLAEILSRNANSEYLQRYKLGGATDRETFKLKLPVITYEDIKPDIQRMADGDRSA 94 (591)
Q Consensus 15 ~~~~~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~t~ygr~~gf~~i~s~edf~~~vPl~~Yed~~p~ier~~~Ge~~~ 94 (591)
..+++++.++.+|..++|++++|+++|++||+.|++|+|||+|||++|+++++||++|||++|||++|||+||++||.++
T Consensus 17 ~~~~~~~~l~~ie~~t~~~~~vQ~~vL~~IL~~n~~Teyg~~~~f~~i~~~~~F~~~VPv~~Yedl~pyI~Ri~~Ge~s~ 96 (612)
T PLN02620 17 LAEKNKKALQFIEDVTSNADEVQKRVLEEILSRNAHVEYLQRHGLNGRTDRETFKKVMPVITYEDIQPDINRIANGDTSP 96 (612)
T ss_pred cccchHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhHHhcCCCCCCCHHHHHHhCCCccHHHhHHHHHHHHcCCCCC
Confidence 35566888999999999999999999999999999999999999999999999999999999999999999999999889
Q ss_pred cccccccceeecccccCCCccccccCChHHHHHHHHHHHHHHHHHhccCCCCCCCCeEEEEecCCCccCCCCceecccCC
Q 007728 95 VLLASPISEFLKSSGTSSGEQKLFPSTQEELDRRHFQISLLRAVMNRCVPDLDKGKGLYFLFVRPETRTPGGLLVRPASN 174 (591)
Q Consensus 95 ll~~~pi~~f~~TSGTT~G~~K~iP~T~~~l~~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip~g~~s~ 174 (591)
|||++||.+|+.|||||||++|+||+|+++++.+..++.+|...+++.+|++..||.+++++...+..|++|||+|++++
T Consensus 97 vL~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~~~~~~~~~~~~~~p~l~~Gk~~~~~~~~~~~~T~~Gip~g~~st 176 (612)
T PLN02620 97 ILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLEKGKGMYFLFIKSEAKTPGGLVARPVLT 176 (612)
T ss_pred ccCCCChhhhhhcCCCCCCceeeeecCHHHHHHHHHHHHHHHHHHHhhCCCcccCcEEEEEecccCccCCCCcccccccc
Confidence 99999999999999999889999999999999998899999999999999999999999999999999999999999999
Q ss_pred cccCcchhhcccc----cccCchhhhhcCChhhhHHHHHHhhcccccceeEEeecchHHHHHHHHHHHHHHHHHHHHHHh
Q 007728 175 SMYKSDHFKTRLH----DYTSPIEAILCADSFQSMYTHMLCGLLEREQVLRLGALFASGLLRAMRFLQIHWQALANDIET 250 (591)
Q Consensus 175 ~~~~~~~~~~~~~----~~~~P~ev~~~~d~~~~~Y~~ll~~L~~~~~~~~i~~~~~~~ll~~~~~l~~~w~~l~~dI~~ 250 (591)
.+|+|.+|+.++. .|++|.++++++|..|++||||||||.+++++..+++.|+++++.+++.|+++|++||+||++
T Consensus 177 ~~y~s~~f~~~~~~~~~~~~sP~ev~~~~D~~qs~Y~~LLcgL~~~~~v~~v~svfa~~ll~a~~~Le~~w~~L~~DI~~ 256 (612)
T PLN02620 177 SYYKSSHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIRFLEKHWTLLCRDIRT 256 (612)
T ss_pred hhhhhhhhhhcccccccceeCcHHhccCCCHHHHHHHHHHHHhhcchhhceEEeechHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999887764 799999999999999999999999999999998999999999999999999999999999999
Q ss_pred ccCCCCCCChhhhhHHhhhcCCcHHHHHHHHHHhccccccccccccCCCCceeeEEEecChHHHHHHHHHHhCCCCeecc
Q 007728 251 GTLNQKITDPSIRDCMARILKPRPELAELIRMECSEENWEGIIARIWPNTKYLDAVATGSMAQYIHLLDYYSGSLPIASM 330 (591)
Q Consensus 251 g~~~~~~~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~~~y~~~l~~~~~g~~v~~~ 330 (591)
|+++++++++.+|.++.+.|+|||++|+.|+.+|.+.+|+|++++|||||++|.||++|+|++|.+.|+.|+||+|+++.
T Consensus 257 G~ls~~itd~~~R~av~~~L~p~pelA~~i~~~c~~~~w~gii~rLWP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~ 336 (612)
T PLN02620 257 GTIDSQITDPSVREAVMKILKPDPKLADFVEAECRKESWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCT 336 (612)
T ss_pred CCCCccCCCHHHHHHHHhhcCCCHHHHHHHHHHhccccccCcHHHhCCCCcEEEEECCCCHHHHHHHHHHHcCCCccccc
Confidence 99999999999999999999999999999999999989999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCCCCCCCCCceeecCCCeEEEEEECCCCCCCC--------CCCCCCCccccccccCCCceEEEEEcc
Q 007728 331 LYSSSECFFGLNLNPMCKTSEASYTIMPNMAYFEFLLHDPGSPAS--------TSDFQPPKLVDLVDVEVGKEYEPIITN 402 (591)
Q Consensus 331 ~ygaSEg~~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~--------~~~~~~~~~~~~~ev~~G~~yelvvTt 402 (591)
+|+||||++|+|++|.|+++...|++.|+.+||||||+++.+... .++..++.+|+++||+.|+.|||||||
T Consensus 337 ~Y~ASE~~~ginl~P~~~p~~~sy~L~p~~~yFEFip~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt 416 (612)
T PLN02620 337 MYASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVHRNNGVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTT 416 (612)
T ss_pred cccccceEEEeccCCCCCcccceeeecCCcEEEEEeeccCcccccccccccccccccccCccccHHHccCCCeEEEEEEe
Confidence 999999999999999999988999999999999999987532100 001123458999999999999999999
Q ss_pred ccceeccccCCEEEEccccCCCCeEEEeeecCceecccccccCHHHHHHHHHHHHHhhcccCceEEeeEeeecCCCCCce
Q 007728 403 YTGVYRYKVGDILRVAGFHNASPHFHFVRRKDALLSIDYDKTDEADLQKAVENASRLLREFDTRILEYTSYAEKKTNPGH 482 (591)
Q Consensus 403 ~~GlyRYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~Geki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~p~~ 482 (591)
++||||||+||||+|+||||++|+|+|+||.+.+++++|||++|+++..||.+|.+.|.+.+++|+||++++|.++.|||
T Consensus 417 ~~GLyRYrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a~~~l~~~~~~l~dyts~~d~~~~Pgh 496 (612)
T PLN02620 417 YAGLYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDASLTEYTSYADTSTIPGH 496 (612)
T ss_pred cCceEEEecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHHHHHhhcccCceeeeEEeccccCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999998876679999999999998899999
Q ss_pred eEEEEEEeecCCCCCCChHHHHHHHHHHHhhhCHHHHHhhhccCccCCeEEEEeCCccHHHHHHHHHhcCCCCCCCcccc
Q 007728 483 HVIYWEILVKDPANSPTDDVLKQCCLAMEESLDSAYREARVVDKTIGPLEIRLVKTGTFEELMDYAISRGASINQYKVAR 562 (591)
Q Consensus 483 Y~l~~E~~~~~~~~~~~~~~~~~~~~~ld~~Ln~~Y~~~R~~~g~l~p~~v~~v~~gtf~~~~~~~~~~G~~~~Q~K~Pr 562 (591)
|+||||+...+. ...+++.++.||..||++||.+|+.+|..+++|+|++|++|++|||++++++++++|++.+|||+||
T Consensus 497 Yvl~~El~~~~~-~~~~~~~l~~cc~~lE~~Ln~~Yr~~R~~~~sIgPLeirvv~~GtF~~l~~~~~~~G~s~~QyK~Pr 575 (612)
T PLN02620 497 YVLFWELCLNGS-TPIPPSVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDYAISLGASINQYKTPR 575 (612)
T ss_pred eEEEEEEecCCC-CCCCHHHHHHHHHHHHHHhCHHHHHHHhcCCcCCCcEEEEeCCChHHHHHHHHHHcCCccccccCce
Confidence 999999953221 1246679999999999999999999996555699999999999999999999999999999999999
Q ss_pred ccCCHhHHHHHhhcchheeccCCCCCCC
Q 007728 563 CVGSTSILKLLDSRVISKHFSPSLPHWT 590 (591)
Q Consensus 563 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 590 (591)
|+++++++++|+++|+++|+|+++|.|+
T Consensus 576 ~v~~~~~~~~l~~~v~~~~~s~~~~~~~ 603 (612)
T PLN02620 576 CVKFAPIIELLNSRVVSNYFSPKCPKWV 603 (612)
T ss_pred EecCHHHHHHHHhhhheeeccccCCCCC
Confidence 9999999999999999999999999996
No 2
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=4.6e-128 Score=1059.61 Aligned_cols=573 Identities=52% Similarity=0.942 Sum_probs=531.1
Q ss_pred hhhHHHHHHHHHHHHcHHHHHHHHHHHHHHhcCCChhhhhcCCCCCCCHHHHhhcCCCcccccccHHHHHHhcCCCcccc
Q 007728 17 EKDAKALQYIEEITRNAATFQETVLAEILSRNANSEYLQRYKLGGATDRETFKLKLPVITYEDIKPDIQRMADGDRSAVL 96 (591)
Q Consensus 17 ~~~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~t~ygr~~gf~~i~s~edf~~~vPl~~Yed~~p~ier~~~Ge~~~ll 96 (591)
+++++.++.+|..++|+.++|+++|++||++|++|+|||+|++ +|.+.++||++|||++|||++|||+||++||.+.++
T Consensus 8 ~~~~~~~~~~e~~t~~~~~~Q~~vL~~iL~~n~~Teyg~~~~~-~i~~~e~Fk~~VPv~~Yedl~pyI~Ri~~Ge~~~ll 86 (606)
T PLN02247 8 NDNEAGLKLLEDLTTNACQIQQQVLEEILTQNAGTEYLRSFLD-GESDKQSFKNKVPVVNYEDIKPCIERIANGESSSII 86 (606)
T ss_pred cchHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhhhhcCc-cCCCHHHHHHhCCCccHHHhHHHHHHHHcCCCCcee
Confidence 3468889999999999999999999999999999999999855 899999999999999999999999999999986667
Q ss_pred cccccceeecccccCCCccccccCChHHHHHHHHHHHHHHHHHhccCCCCCCCCeEEEEecCCCccCCCCceecccCCcc
Q 007728 97 LASPISEFLKSSGTSSGEQKLFPSTQEELDRRHFQISLLRAVMNRCVPDLDKGKGLYFLFVRPETRTPGGLLVRPASNSM 176 (591)
Q Consensus 97 ~~~pi~~f~~TSGTT~G~~K~iP~T~~~l~~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip~g~~s~~~ 176 (591)
+++||.+|+.|||||||++|+||+|+++++++.+++.+|...+++..|++..||.+++++.+++..|++|||+|++++.+
T Consensus 87 t~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~~~~~~l~~~~~~~~~p~l~~Gk~~~~~~~~~~~~T~~Gip~g~~~t~y 166 (606)
T PLN02247 87 SAQPITELLTSSGTSGGQPKLMPSTAEELDRKTFFYNLLVPVMNKYVDGLDQGKGMYLLFIKPEISTPSGLMARPVLTSY 166 (606)
T ss_pred CCCCcceeeccCCCCCCceeEeeccHHHHHHHHHHHHHHHHHHHhcCCCcccCcEEEEEecCcCccCCCCcccccccchh
Confidence 79999999999999988999999999999999899999999998888999999999999999999999999999999999
Q ss_pred cCcchhhcccc----cccCchhhhhcCChhhhHHHHHHhhcccccceeEEeecchHHHHHHHHHHHHHHHHHHHHHHhcc
Q 007728 177 YKSDHFKTRLH----DYTSPIEAILCADSFQSMYTHMLCGLLEREQVLRLGALFASGLLRAMRFLQIHWQALANDIETGT 252 (591)
Q Consensus 177 ~~~~~~~~~~~----~~~~P~ev~~~~d~~~~~Y~~ll~~L~~~~~~~~i~~~~~~~ll~~~~~l~~~w~~l~~dI~~g~ 252 (591)
+++.+|+.++. .|++|.++++++|..|++||||||||.+++++..+++.|+++++++++.|+++|++||+||++|+
T Consensus 167 ~~s~~f~~~~~~~~~~~~sP~ev~~~~D~~qs~Y~~LLcgL~~~~~vl~v~svfa~s~l~a~~~Le~~we~L~~DI~~G~ 246 (606)
T PLN02247 167 YKSSNFRNRPFNRYNVYTSPDETILCQDSKQSMYCQLLCGLVQRDEVLRVGAVFASAFLRAIKFLEDHWKELCSNIRTGC 246 (606)
T ss_pred hccccccccccccccceeCcHHhhcCCCHHHHHHHHHHHHhhccccccEEEEeccHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99998876543 78999999999999999999999999998888899999999999999999999999999999999
Q ss_pred CCCCCCChhhhhHHhhhc-CCcHHHHHHHHHHhccccccccccccCCCCceeeEEEecChHHHHHHHHHHhCCCCeeccc
Q 007728 253 LNQKITDPSIRDCMARIL-KPRPELAELIRMECSEENWEGIIARIWPNTKYLDAVATGSMAQYIHLLDYYSGSLPIASML 331 (591)
Q Consensus 253 ~~~~~~~~~~r~~l~~~l-~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~~~y~~~l~~~~~g~~v~~~~ 331 (591)
++.+++++.+|.++.+.+ +|+|++|++|+.+|.+.+|.|++++|||||++|.||++|+|++|.+.|+.|+||+|+++.+
T Consensus 247 ls~~it~p~~R~a~~~~l~~p~peLA~~l~~~c~~~~w~gi~~rLWP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~ 326 (606)
T PLN02247 247 VSDWITDPSCRNAVSSILSKPNSELADLIESECSGKSWEGIIKRLWPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTM 326 (606)
T ss_pred cccccCCHHHHHHHhhcccCCCHHHHHHHHHHhcccCccccHHHhCCCCcEEEEECCCCHHHHHHHHHHHcCCCceeccc
Confidence 999999999999999999 6999999999999999899999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCCCCCCCCCceeecCCCeEEEEEECCCCCCCC-----CC---C-----CCCCccccccccCCCceEEE
Q 007728 332 YSSSECFFGLNLNPMCKTSEASYTIMPNMAYFEFLLHDPGSPAS-----TS---D-----FQPPKLVDLVDVEVGKEYEP 398 (591)
Q Consensus 332 ygaSEg~~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~-----~~---~-----~~~~~~~~~~ev~~G~~yel 398 (591)
|+||||++|+|++|.|+++...|++.|+.+||||||.++.+.+. .+ . ..++.+|+++||++|+.|||
T Consensus 327 Y~sSE~~~ginl~p~~~p~~~sy~L~p~~~yFEFip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~Yel 406 (606)
T PLN02247 327 YASSECYFGINLKPLSDPSDVSYTLLPNMAYFEFLPVDKNNGEVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYEL 406 (606)
T ss_pred ccccceEEEeccCcCCCccCCceeecCCcEEEEEeecCCCcccccccccccccccccccccccCceecHHHccCCCeEEE
Confidence 99999999999999999888999999999999999987543110 00 0 11234999999999999999
Q ss_pred EEccccceeccccCCEEEEccccCCCCeEEEeeecCceecccccccCHHHHHHHHHHHHHhhcccCceEEeeEeeecCCC
Q 007728 399 IITNYTGVYRYKVGDILRVAGFHNASPHFHFVRRKDALLSIDYDKTDEADLQKAVENASRLLREFDTRILEYTSYAEKKT 478 (591)
Q Consensus 399 vvTt~~GlyRYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~Geki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~ 478 (591)
||||++||||||+||||+|+||||++|+|+|+||.+.+++++|||++|+++..||.+|.+.+++.++.|+||++++|.++
T Consensus 407 VvTt~~GLYRYrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a~~~l~~~~~~l~d~ts~~d~~~ 486 (606)
T PLN02247 407 VVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQAKLLLEPLGFLLTEYTSYADTSS 486 (606)
T ss_pred EEEecCceEEEecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHHHHHhhcccCeeeeeeecccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999877666899999999999888
Q ss_pred CCceeEEEEEEeecCCC--CCCChHHHHHHHHHHHhhhCHHHHHhhhccCccCCeEEEEeCCccHHHHHHHHHhcCCCCC
Q 007728 479 NPGHHVIYWEILVKDPA--NSPTDDVLKQCCLAMEESLDSAYREARVVDKTIGPLEIRLVKTGTFEELMDYAISRGASIN 556 (591)
Q Consensus 479 ~p~~Y~l~~E~~~~~~~--~~~~~~~~~~~~~~ld~~Ln~~Y~~~R~~~g~l~p~~v~~v~~gtf~~~~~~~~~~G~~~~ 556 (591)
.||||+||||+...+.. ...++..+++||..||++||.+|+.+|..+|+|+|++|++|++|||++++++++++|++.+
T Consensus 487 ~PghYvlf~El~~~~~~~~~~~~~~~l~~cc~~lE~~Ln~~Yr~~R~~~~~igPLeirvv~~GtF~~l~~~~~~~G~s~~ 566 (606)
T PLN02247 487 IPGHYVLFWELKTRGSNDPPELDPKIMEQCCSTVEESLDSVYRRCRKRDKSIGPLEIRVVKHGTFDALMDFCVSQGSSVN 566 (606)
T ss_pred CCCceEEEEEeecCCCCccccchHHHHHHHHHHHHHHhhHHHHHHhhccCcCCCcEEEEeCCChHHHHHHHHHHcCCCcc
Confidence 99999999999632211 1234568999999999999999999996556999999999999999999999999999999
Q ss_pred CCccccccCCHhHHHHHhhcchheeccCCCCCCC
Q 007728 557 QYKVARCVGSTSILKLLDSRVISKHFSPSLPHWT 590 (591)
Q Consensus 557 Q~K~Pr~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 590 (591)
|||+|||+++++++++|+++||++|+|+++|.|+
T Consensus 567 Q~K~Pr~v~~~~~~~~l~~~v~~~~~s~~~~~~~ 600 (606)
T PLN02247 567 QYKTPRCIKSEEALKILDSRVIGRFFSKRVPFWE 600 (606)
T ss_pred cccCceEecCHHHHHHHHhhhheeeccccCCCCC
Confidence 9999999999999999999999999999999996
No 3
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=1.9e-121 Score=1016.43 Aligned_cols=573 Identities=66% Similarity=1.095 Sum_probs=524.2
Q ss_pred CCcchhhHHHHHHHHHHHHcHHHHHHHHHHHHHHhcCCChhhhhcCCCCCCCHHHHhhcCCCcccccccHHHHHHhcCCC
Q 007728 13 PRVSEKDAKALQYIEEITRNAATFQETVLAEILSRNANSEYLQRYKLGGATDRETFKLKLPVITYEDIKPDIQRMADGDR 92 (591)
Q Consensus 13 ~~~~~~~~~~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~t~ygr~~gf~~i~s~edf~~~vPl~~Yed~~p~ier~~~Ge~ 92 (591)
|.+.+++++.++.+|..++|++++|+++|++||+.|++|+|||+|||++|+++++||++|||++|||++|||+|+++||.
T Consensus 14 ~~~~~~~~~~l~~~e~~t~~~~~~Q~~vL~~iL~~n~~Teyg~~~gf~~i~~~~~F~~~VPv~~Yedl~pyIeRi~~Ge~ 93 (597)
T PLN02249 14 PTTSEKDVKALKFIEEMTRNPDSVQEKVLGEILSRNSNTEYLKRFDLNGAVDRKTFKSKVPVVTYEDLKTEIQRISNGDR 93 (597)
T ss_pred CCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccChhHHhcCCCCCCCHHHHHHhCCCccHHHhHHHHHHHHcCCC
Confidence 34555668889999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cccccccccceeecccccCCCccccccCChHHHH--HHHHHHHHHHHHHhccCCCCCCCCeEEEEecCCCccCCCCceec
Q 007728 93 SAVLLASPISEFLKSSGTSSGEQKLFPSTQEELD--RRHFQISLLRAVMNRCVPDLDKGKGLYFLFVRPETRTPGGLLVR 170 (591)
Q Consensus 93 ~~ll~~~pi~~f~~TSGTT~G~~K~iP~T~~~l~--~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip~g 170 (591)
++|||++||.+|+.|||||||++|+||+|+++++ .+..+..+| ..++..|++..||.|+++++..+..|.+|+|+|
T Consensus 94 ~~vL~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~~~~~~~~~~~~--~~~~~~~~l~~Gk~l~~~~~~~~~~t~gG~p~~ 171 (597)
T PLN02249 94 SPILSSHPITEFLTSSGTSAGERKLMPTIEEDIDRRQLLGSLLMP--VMNLYVPGLDKGKGLYFLFVKSESKTSGGLPAR 171 (597)
T ss_pred CceeCCCchhhhcccCCCCCCceeEEeccHHHHHHHHHHHHHHHH--HHhccCCccccCcEEEEEeccccccCCCCCccC
Confidence 7799999999999999999889999999999998 345555555 333447888899999999998899999999999
Q ss_pred ccCCcccCcchhhcccc--cccCchhhhhcCChhhhHHHHHHhhcccccceeEEeecchHHHHHHHHHHHHHHHHHHHHH
Q 007728 171 PASNSMYKSDHFKTRLH--DYTSPIEAILCADSFQSMYTHMLCGLLEREQVLRLGALFASGLLRAMRFLQIHWQALANDI 248 (591)
Q Consensus 171 ~~s~~~~~~~~~~~~~~--~~~~P~ev~~~~d~~~~~Y~~ll~~L~~~~~~~~i~~~~~~~ll~~~~~l~~~w~~l~~dI 248 (591)
++++.++++.+|+.+.. .|++|.+++.+.|.++++||||||||..++++..|++.+|+.++.++..|+++|+++|+||
T Consensus 172 ~~~~~~~~~~~f~~~~~~~~~~~P~ev~~~~D~~~~~Y~~lL~gL~~~~~~~~i~~~~Ps~l~~~~~~l~~~weel~~dI 251 (597)
T PLN02249 172 PALTSYYKSDHFRTSDYDNVYTSPNEAILCSDSSQSMYAQMLCGLLMRHEVLRLGAVFPSGLLRAISFLQNNWKELAQDI 251 (597)
T ss_pred ccccccccccccccccccccccCcHHhhcCCCHHHHHHHHHHHHHhhccccceEEEECcHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888777655433 8999999999999999999999999999888999999999999999999999999999999
Q ss_pred HhccCCCCCCChhhhhHHhhhc-CCcHHHHHHHHHHhccccccccccccCCCCceeeEEEecChHHHHHHHHHHhCCCCe
Q 007728 249 ETGTLNQKITDPSIRDCMARIL-KPRPELAELIRMECSEENWEGIIARIWPNTKYLDAVATGSMAQYIHLLDYYSGSLPI 327 (591)
Q Consensus 249 ~~g~~~~~~~~~~~r~~l~~~l-~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~~~y~~~l~~~~~g~~v 327 (591)
++|+++.+++++.+|..+...+ .|+|++|++|+++|.+.+|+|++++|||||++|+||++||+++|++.++.++|++++
T Consensus 252 ~~g~~~~~~~~~~~~~~v~~i~g~P~~~la~~i~~~~~~~~~~gii~~lWPnl~~i~~~~~G~~~~Y~~~l~~~~g~~~~ 331 (597)
T PLN02249 252 STGTLSSKIFDPAIKNRMSKILNKPDQELAEFLIGVCSQENWEGIITKIWPNTKYLDVIVTGAMAQYIPMLEYYSGGLPM 331 (597)
T ss_pred HhCCCcccccchHHHHHHHhhcCCCCHHHHHHHHHHhccccccccHHHhCCCCCeEEEEecCChHHHHHHHHHHcCCCcc
Confidence 9999999999999999999888 699999999999999878999999999999999999999999999999999999999
Q ss_pred eccccccccccccccCCCCCCCCCCceeecCCCeEEEEEECCCCCCCCCCCCCCCccccccccCCCceEEEEEcccccee
Q 007728 328 ASMLYSSSECFFGLNLNPMCKTSEASYTIMPNMAYFEFLLHDPGSPASTSDFQPPKLVDLVDVEVGKEYEPIITNYTGVY 407 (591)
Q Consensus 328 ~~~~ygaSEg~~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt~~Gly 407 (591)
++.+|+||||++|+|+++.|+++..+|+|+|+++||||||.++.+. +....+.+|+++|||.|++|||||||++|||
T Consensus 332 ~~~~Y~ASEg~~gi~~~~~~~p~~~~~~l~~~~~ffEFiP~~~~~~---~~~~~~~~v~l~eVe~G~~Y~lVvTT~~GLy 408 (597)
T PLN02249 332 ASTIYASSESYFGINLNPMCKPSEVSYTIMPNMAYFEFLPHNHDGD---GALDETSLVELADVEVGKEYELVITTYAGLY 408 (597)
T ss_pred ccccccccceEEEeecCCCCCCCCcceEecCCcEEEEeeecccCCc---ccCCCCcEecHHHcCCCCeEEEEEEccccee
Confidence 9999999999999999999988888999999999999999875421 0001335999999999999999999999999
Q ss_pred ccccCCEEEEccccCCCCeEEEeeecCceecccccccCHHHHHHHHHHHHHhhcccCceEEeeEeeecCCCCCceeEEEE
Q 007728 408 RYKVGDILRVAGFHNASPHFHFVRRKDALLSIDYDKTDEADLQKAVENASRLLREFDTRILEYTSYAEKKTNPGHHVIYW 487 (591)
Q Consensus 408 RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~Geki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~p~~Y~l~~ 487 (591)
||++||+|+|+||+|++|+|+|+||.+.++|++|||++|++++.||.+|.+.+++.|+.|.||+++.+.++.|+||+|||
T Consensus 409 RY~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~a~~~~~~~~~~v~eft~~~~~~~~p~Hyvl~w 488 (597)
T PLN02249 409 RYRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVENASRLLAEQGTRVIEYTSYAETKTIPGHYVIYW 488 (597)
T ss_pred EeecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHHHHHHhhhcCceEEEeEEecCCCCCCCceEEEE
Confidence 99999999999999999999999999999999999999999999999988777677999999999888877799999999
Q ss_pred EEeecCCCC-CCChHHHHHHHHHHHhhhCHHHHHhhhccCccCCeEEEEeCCccHHHHHHHHHhcCCCCCCCccccccCC
Q 007728 488 EILVKDPAN-SPTDDVLKQCCLAMEESLDSAYREARVVDKTIGPLEIRLVKTGTFEELMDYAISRGASINQYKVARCVGS 566 (591)
Q Consensus 488 E~~~~~~~~-~~~~~~~~~~~~~ld~~Ln~~Y~~~R~~~g~l~p~~v~~v~~gtf~~~~~~~~~~G~~~~Q~K~Pr~~~~ 566 (591)
|++..++.. ..+.+.+++||+.++++||.+|+++|..+|+|+||+|++|++|+|.+|+++++++|++.||||+|||+++
T Consensus 489 ei~~~~~~~~~~~~~~~~~~~~~~e~~ln~~Y~~~R~~~~~L~pl~v~vv~~GtF~~~~~~~~~~G~~~gQ~K~Prl~~~ 568 (597)
T PLN02249 489 ELLGRDQSNALPSDEVMAKCCLEMEESLNSVYRQSRVSDKSIGPLEIRVVQNGTFEELMDYAISRGSSINQYKVPRCVSL 568 (597)
T ss_pred EEeccccccCCCCHHHHHHHHHHHHHHhCHHHHHHHhcCCccCCeEEEEeCCchHHHHHHHHHhCCCcCCCcCCceEeCC
Confidence 994212110 1456789999999999999999999966569999999999999999999999999999999999999999
Q ss_pred HhHHHHHhhcchheeccCCCCCCC
Q 007728 567 TSILKLLDSRVISKHFSPSLPHWT 590 (591)
Q Consensus 567 ~~~~~~l~~~~~~~~~~~~~~~~~ 590 (591)
++++++|+++|+++|+|+++|.|.
T Consensus 569 ~~~~~~l~~~~~~~~~~~~~~~~~ 592 (597)
T PLN02249 569 TPIMELLDSRVVSAHFSPSLPHWS 592 (597)
T ss_pred HHHHHHHHhhhheeeccccCCCCC
Confidence 999999999999999999999996
No 4
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=100.00 E-value=1.5e-110 Score=928.38 Aligned_cols=512 Identities=38% Similarity=0.653 Sum_probs=408.4
Q ss_pred HHHHHHHHHHcHHHHHHHHHHHHHHhcCCChhhhhcCCCCCCCHHH--HhhcCCCcccccccHHHHHHhcCCCccccccc
Q 007728 22 ALQYIEEITRNAATFQETVLAEILSRNANSEYLQRYKLGGATDRET--FKLKLPVITYEDIKPDIQRMADGDRSAVLLAS 99 (591)
Q Consensus 22 ~~~~~e~~~~~~~~~Q~~~L~~iL~~~~~t~ygr~~gf~~i~s~ed--f~~~vPl~~Yed~~p~ier~~~Ge~~~ll~~~ 99 (591)
.+++|++.++|++++|+++|++||+.|++|+|||+|||++|.|++| ||++|||++||||+|||+||++||. +|||++
T Consensus 2 ~l~~f~~~~~~~~~~Q~~~L~~iL~~n~~T~yGr~~gf~~i~s~ed~~Fr~~VPi~~Yed~~pyIeR~~~Ge~-~vL~~~ 80 (528)
T PF03321_consen 2 VLKRFEKATKNPEQVQEEVLREILRRNADTEYGRDHGFAGIRSVEDESFRKRVPITDYEDYRPYIERIAEGEE-NVLTPG 80 (528)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHCTTSHHHHCTT--S----HHHHHHHHS--BEHHHHHHHHHHHHTT---CCTSSS
T ss_pred hHHHHHHHHhCHHHHHHHHHHHHHHhhccCHhHHhcCCCCCCCcchHHHHHhCCCccHHHHHHHHHHHhcCCC-CCCCCC
Confidence 4789999999999999999999999999999999999999999999 9999999999999999999999997 699999
Q ss_pred ccceeecccccCCCccccccCChHHHHHHH--HHHHHHHHHHhccCCCC-CCCC--eEEEEecCCCccCCCCceecccCC
Q 007728 100 PISEFLKSSGTSSGEQKLFPSTQEELDRRH--FQISLLRAVMNRCVPDL-DKGK--GLYFLFVRPETRTPGGLLVRPASN 174 (591)
Q Consensus 100 pi~~f~~TSGTT~G~~K~iP~T~~~l~~~~--~~~~~~~~~~~~~~p~~-~~gk--~l~~~~~~~~~~t~~Gip~g~~s~ 174 (591)
|+.+|..||||||+++|+||+|++++..+. .+..+|...+.+++|.. ..|| .+.+.+......|++|+|+|++|+
T Consensus 81 ~~~~f~~TSGTTg~~~K~IP~T~~~l~~~~~~~~~~~~~~~l~~~~p~~~~~gk~~~l~~~~~~~~~~t~~Gi~~g~~s~ 160 (528)
T PF03321_consen 81 PPIYFALTSGTTGGKSKLIPYTKEFLKEFRRLGAIAAWLYYLYRNFPGLLFQGKSLYLSFSFAPPPLRTPGGIPIGSISG 160 (528)
T ss_dssp --SEEEEEEEEETTEEEEEEESHHHHHHHHHHHHHHHHH--HHHHSSS--TTSE--EEEE------EE-TTS-EEE-HHH
T ss_pred CCCeEEeCCCCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHhcCcccccCCcceEEEeecCCCcccCCCCeEEecccc
Confidence 999999999999555999999999999976 67778887888899986 6788 444444567788999999999999
Q ss_pred cccC--cchhhcccccccCchhhhhcCChhhhHHHHHHhhcccccceeEEeecchHHHHHHHHHHHHHHHHHHHHHHhcc
Q 007728 175 SMYK--SDHFKTRLHDYTSPIEAILCADSFQSMYTHMLCGLLEREQVLRLGALFASGLLRAMRFLQIHWQALANDIETGT 252 (591)
Q Consensus 175 ~~~~--~~~~~~~~~~~~~P~ev~~~~d~~~~~Y~~ll~~L~~~~~~~~i~~~~~~~ll~~~~~l~~~w~~l~~dI~~g~ 252 (591)
.+++ +..|+ ..|++|.+++.+.|.++++||||+|+|.++++++.|+++|++.++.+++.++++|+++|+||++|+
T Consensus 161 ~~~~~~~~~~~---~~~~~P~~~~~~~~~~~~~y~~ll~~l~~~~~l~~i~~~~p~~l~~~~~~le~~~~~l~~dI~~G~ 237 (528)
T PF03321_consen 161 IPYRMIPPWFR---SWFTSPSEVIAAIDDWEAKYCHLLCALLQDRDLRMISGWFPSFLLLLFRLLEKHWEELVEDIRDGT 237 (528)
T ss_dssp HHHT--SCCHH---G-BSS-HHHHT-S-HHHHHHHHHHHHHHCGGGEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred cchhhChHHHc---cCccCCHHHHhcccHHHHHHHHHHHHhhcccCcCEEEeeCHHHHHHHHHHHHHhhhHhhHHhcCCc
Confidence 9888 44443 279999999999999999999999999977899999999999999999999999999999999999
Q ss_pred CCCCCCChhhhhHHhhhcCCcHHHHHHHHHHhccccccccccccCCCCceeeEEEecChHHHHHHHHHHhCCCCeecccc
Q 007728 253 LNQKITDPSIRDCMARILKPRPELAELIRMECSEENWEGIIARIWPNTKYLDAVATGSMAQYIHLLDYYSGSLPIASMLY 332 (591)
Q Consensus 253 ~~~~~~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~~~y~~~l~~~~~g~~v~~~~y 332 (591)
++ .++|+|++|++|+++|.++ .|++++|||||++|.||.+|++.+|+++|++++|++++++.+|
T Consensus 238 ~~--------------~~~p~p~rA~~L~~~~~~~--~~~~~~lWP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y 301 (528)
T PF03321_consen 238 LS--------------LLRPNPERAAELRAEFEKG--RGIPKRLWPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGY 301 (528)
T ss_dssp ----------------C-S--HHHHHHHHHHHCCS--TTHHHHHSTT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EE
T ss_pred cc--------------cCCCCHHHHHHHHHhhccc--CCCHHHhCCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccc
Confidence 98 4678999999999999986 7899999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCCCCCceeecCCCeEEEEEECCCCCCCCCCCCCCCccccccccCCCceEEEEEccccceeccccC
Q 007728 333 SSSECFFGLNLNPMCKTSEASYTIMPNMAYFEFLLHDPGSPASTSDFQPPKLVDLVDVEVGKEYEPIITNYTGVYRYKVG 412 (591)
Q Consensus 333 gaSEg~~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt~~GlyRYr~G 412 (591)
+||||++|+|+++ +..+|.+.|+.+||||||+++.+.+ ....+++++++||++|++|||||||.+||||||+|
T Consensus 302 ~ASEg~i~i~~~~----~~~~~~l~~~~~ffEFip~~~~~~~---~~~~~~~l~~~ele~G~~YelviTt~~GLyRY~iG 374 (528)
T PF03321_consen 302 GASEGFIGIPLDP----EDPGYVLAPDSGFFEFIPVDEDEQN---PSEQPKTLLLHELEVGEEYELVITTNSGLYRYRIG 374 (528)
T ss_dssp EETTEEEEEES-C----CC--EEE-TTSSEEEEEE-STT----------SSSEEGGG--TT-EEEEEEESTTS-SSEEEC
T ss_pred cccceEEEEecCC----CCCceEeecCCeEEEEEeccCCccc---ccCCCceecHHHhcCCCeEEEEEecccceeeeecC
Confidence 9999999999874 3567999999999999999875310 01245699999999999999999999999999999
Q ss_pred CEEEEccccCCCCeEEEeeecCceecccccccCHHHHHHHHHHHHHhhcccCceEEeeEeeec-CCCCCceeEEEEEEee
Q 007728 413 DILRVAGFHNASPHFHFVRRKDALLSIDYDKTDEADLQKAVENASRLLREFDTRILEYTSYAE-KKTNPGHHVIYWEILV 491 (591)
Q Consensus 413 DvV~v~gf~~~~P~i~f~gR~~~~l~~~Geki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~-~~~~p~~Y~l~~E~~~ 491 (591)
|||+|+||++.+|+|+|+||.++++|+.|||++|.+|++||.++++ ++|+++.+|++.++ .++.||||++|||++.
T Consensus 375 DvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~av~~~~~---~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~ 451 (528)
T PF03321_consen 375 DVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEAVARALQ---ETGLELRDFTVAPDPSSGNPPHYVLFWELEG 451 (528)
T ss_dssp EEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHHHHHHHH---CTT-EEEEEEEEEE--SSSSBEEEEEEEECS
T ss_pred CEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHHHHHHHH---hcCCceeeEEEEeecccCCCCceEEEEEeCC
Confidence 9999999999999999999999999999999999999999999863 58999999999998 6789999999999962
Q ss_pred cCCCCCCChHHHHHHHHHHHhhh---CHHHHHhhhccCccCCeEEEEeCCccHHHHHHHHHhc-CCCCCCCccccccCCH
Q 007728 492 KDPANSPTDDVLKQCCLAMEESL---DSAYREARVVDKTIGPLEIRLVKTGTFEELMDYAISR-GASINQYKVARCVGST 567 (591)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~ld~~L---n~~Y~~~R~~~g~l~p~~v~~v~~gtf~~~~~~~~~~-G~~~~Q~K~Pr~~~~~ 567 (591)
. +..++.|++.||++| |++|+.+|..+|+|+||+|++|++|+|++|+++++++ |++.+|||+|||++++
T Consensus 452 ------~-~~~~~~~~~~lD~~L~~~n~~Y~~~R~~~g~L~p~~v~~v~~g~f~~~~~~~~~~~G~~~~Q~K~pr~~~~~ 524 (528)
T PF03321_consen 452 ------E-PDDLEELAKALDESLQELNPHYRRARESDGQLGPPRVHIVRPGTFDALMERAVARLGGSAGQYKVPRLIRDR 524 (528)
T ss_dssp --------HHHHHHHHHHHHHCS----HHHHHHHHTSTSC---EEEEE-TTHHHHHHHHHHCT-T--SSS----SS--TC
T ss_pred ------C-chHHHHHHHHHHHHhhhCCchHHHHHhhcCCcCCcEEEEeCcchHHHHHHHHhhcCCCCccceeCccccCcc
Confidence 1 458889999999999 9999999954289999999999999999999999999 9999999999999999
Q ss_pred hHH
Q 007728 568 SIL 570 (591)
Q Consensus 568 ~~~ 570 (591)
++.
T Consensus 525 ~~~ 527 (528)
T PF03321_consen 525 EFV 527 (528)
T ss_dssp HHH
T ss_pred ccC
Confidence 874
No 5
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=100.00 E-value=2.5e-32 Score=289.63 Aligned_cols=398 Identities=18% Similarity=0.215 Sum_probs=271.4
Q ss_pred HHHHH-HHcHHHHHHHHHHHHHHh-cCCChhhhhc----CC--CCCCCHHHHhhcCCCcccccccHHHH-HHhcCCCccc
Q 007728 25 YIEEI-TRNAATFQETVLAEILSR-NANSEYLQRY----KL--GGATDRETFKLKLPVITYEDIKPDIQ-RMADGDRSAV 95 (591)
Q Consensus 25 ~~e~~-~~~~~~~Q~~~L~~iL~~-~~~t~ygr~~----gf--~~i~s~edf~~~vPl~~Yed~~p~ie-r~~~Ge~~~l 95 (591)
+.|.+ .+.+++.|++.|+.++++ ++|++|||++ |+ +.|++.+|+. ++|+++++++|.... ++.+.
T Consensus 14 ~~e~~~r~eL~~lq~~rl~~~~k~~yeNsPfYr~~f~~~~v~p~~i~~l~Dl~-klP~t~K~~lre~ypf~~~~~----- 87 (438)
T COG1541 14 EIETLSRKELEKLQEKRLKSTVKYVYENSPFYRKKFKEAGVDPDDIKTLEDLA-KLPFTTKDDLRENYPFGDFAV----- 87 (438)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHcCCChHHhhCHHHHH-hCCCCcHHHHHHhCCcccccc-----
Confidence 45665 688999999999999998 6999999987 33 4689999995 899999999988766 33332
Q ss_pred ccccccceeecccccCCCccccccCChHHHHHHHHH--HHHHHHHHhccCCCCCCCCeEEEEecCCCccCCCCceecccC
Q 007728 96 LLASPISEFLKSSGTSSGEQKLFPSTQEELDRRHFQ--ISLLRAVMNRCVPDLDKGKGLYFLFVRPETRTPGGLLVRPAS 173 (591)
Q Consensus 96 l~~~pi~~f~~TSGTT~G~~K~iP~T~~~l~~~~~~--~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip~g~~s 173 (591)
+.+.+.+++.||||| |+|+.+|+|..++..+... +.++. -+...|+.++..++ .+...||+-.
T Consensus 88 -~~~~i~~ihaSSGTT-GkPt~~~~t~~D~~~wa~~~aR~~~~-------~g~~~gd~v~~~~~--yGl~tgg~~~---- 152 (438)
T COG1541 88 -PKEEIVRIHASSGTT-GKPTVFGYTAKDIERWAELLARSLYS-------AGVRKGDKVQNAYG--YGLFTGGLGL---- 152 (438)
T ss_pred -cccceEEEEccCCCC-CCceeeecCHHHHHHHHHHHHHHHHH-------ccCCCCCEEEEEee--eccccCCchh----
Confidence 346677899999999 8999999999988776432 22222 13456776666655 2245555311
Q ss_pred CcccCcchhhcccccccCchhhhhcCChhhhHHHHHHhhcccccceeEEeecchHHHHHHHHHHHHHHHHHHHHHHhccC
Q 007728 174 NSMYKSDHFKTRLHDYTSPIEAILCADSFQSMYTHMLCGLLEREQVLRLGALFASGLLRAMRFLQIHWQALANDIETGTL 253 (591)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~P~ev~~~~d~~~~~Y~~ll~~L~~~~~~~~i~~~~~~~ll~~~~~l~~~w~~l~~dI~~g~~ 253 (591)
+|..-.+++ .+.++++.+...-+.+++.+
T Consensus 153 -------------------------------~~ga~rig~----~vip~~~g~~~~~~~l~~df---------------- 181 (438)
T COG1541 153 -------------------------------HYGAERIGA----TVIPISGGNTERQLELMKDF---------------- 181 (438)
T ss_pred -------------------------------HHHHHhhCE----EEEccCCccHHHHHHHHHhc----------------
Confidence 111112233 34444443444444443322
Q ss_pred CCCCCChhhhhHHhhhcCCcHHHHHHHHHHhccccccccccccCCCCceeeEEEecC---hHHHHHHHHHHhCCCCeecc
Q 007728 254 NQKITDPSIRDCMARILKPRPELAELIRMECSEENWEGIIARIWPNTKYLDAVATGS---MAQYIHLLDYYSGSLPIASM 330 (591)
Q Consensus 254 ~~~~~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~---~~~y~~~l~~~~~g~~v~~~ 330 (591)
..+... ..|..+..|.+.+.+.|. .+.++ + |+.++.|+ ....++.+++.| |++++ +
T Consensus 182 --~~tvI~----------~tps~~l~lae~~~~~G~--~~~~~--~---lk~~i~gaE~~see~R~~ie~~~-g~~~~-d 240 (438)
T COG1541 182 --KPTVIA----------ATPSYLLYLAEEAEEEGI--DPDKL--S---LKKGIFGAEPWSEEMRKVIENRF-GCKAF-D 240 (438)
T ss_pred --CCcEEE----------EChHHHHHHHHHHHHcCC--Chhhc--c---eeEEEEecccCCHHHHHHHHHHh-CCcee-e
Confidence 122111 267777777777666531 33344 3 77888887 368899999999 89998 9
Q ss_pred cccccccc-ccccCCCCCCCCCCceeecCCCeEEEEEECCCCCCCCCCCCCCCccccccccCCCceEEEEEcc----ccc
Q 007728 331 LYSSSECF-FGLNLNPMCKTSEASYTIMPNMAYFEFLLHDPGSPASTSDFQPPKLVDLVDVEVGKEYEPIITN----YTG 405 (591)
Q Consensus 331 ~ygaSEg~-~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt----~~G 405 (591)
.||+||++ .|. .+|.. ..++|++.+.-++|.+++++.. .|..|+.||||+|| ..+
T Consensus 241 iYGltE~~g~g~---~eC~~-~~glhi~eD~~~~Ei~dP~t~e----------------~l~dge~GelV~T~L~~~~~P 300 (438)
T COG1541 241 IYGLTEGFGPGA---GECTE-RNGLHIWEDHFIFEIVDPETGE----------------QLPDGERGELVITTLTKEGMP 300 (438)
T ss_pred ccccccccCCcc---ccccc-ccCCCcchhhceeeeecCCcCc----------------cCCCCCeeEEEEEeccccCcc
Confidence 99999984 442 47775 3489999899999999988652 56789999999997 356
Q ss_pred eeccccCCEEEEcccc----CCCCeE-EEeeecCceecccccccCHHHHHHHHHHHHHhhcccCceEEeeEeeecCCCCC
Q 007728 406 VYRYKVGDILRVAGFH----NASPHF-HFVRRKDALLSIDYDKTDEADLQKAVENASRLLREFDTRILEYTSYAEKKTNP 480 (591)
Q Consensus 406 lyRYr~GDvV~v~gf~----~~~P~i-~f~gR~~~~l~~~Geki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~p 480 (591)
|+||||||++.+.... +..|+| ++.||.+||+.+.|.++++.+|+.+|.+... +.. +|.+.......-
T Consensus 301 lIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~------~~~-~yqi~~~~~~~~ 373 (438)
T COG1541 301 LIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPE------VTP-HYQIILTRNGGL 373 (438)
T ss_pred eEEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccC------CCc-eEEEEEecCCCC
Confidence 9999999999998632 344456 9999999999999999999999999987532 222 787766542222
Q ss_pred ceeEEEEEEeecCCCCCCChHHHHHHHHHHHhhhCHHHHHhhhccCccCCeEEEEeCCccHHHHHHHHHhcCCCCCCCcc
Q 007728 481 GHHVIYWEILVKDPANSPTDDVLKQCCLAMEESLDSAYREARVVDKTIGPLEIRLVKTGTFEELMDYAISRGASINQYKV 560 (591)
Q Consensus 481 ~~Y~l~~E~~~~~~~~~~~~~~~~~~~~~ld~~Ln~~Y~~~R~~~g~l~p~~v~~v~~gtf~~~~~~~~~~G~~~~Q~K~ 560 (591)
.+.++-+|++.. + .......+++..+.+.+ .... ...++|.+|.+|+.++. .| |.
T Consensus 374 d~L~V~vE~~~~-~---~~~~~~~~~~~~l~~~~-------~~~~--~~~~~v~~v~~g~l~r~------~~------K~ 428 (438)
T COG1541 374 DELTVRVELENE-A---EELEDERRLAKKLIKNI-------KSEL--GVRVEVELVEPGELPRT------EG------KA 428 (438)
T ss_pred ceEEEEEEecCc-c---cchHHHHHHHHHHHHHH-------Hhhc--CCceEEEEEeccceecc------cC------ce
Confidence 355566777521 1 11122333333444433 2222 57789999999998864 22 77
Q ss_pred ccccCCH
Q 007728 561 ARCVGST 567 (591)
Q Consensus 561 Pr~~~~~ 567 (591)
+|++.-+
T Consensus 429 krvvd~r 435 (438)
T COG1541 429 KRVVDKR 435 (438)
T ss_pred eEEEEec
Confidence 7877543
No 6
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.96 E-value=2.9e-28 Score=266.84 Aligned_cols=391 Identities=13% Similarity=0.074 Sum_probs=229.0
Q ss_pred HHcHHHHHHHHHHHHHHhc-CCChhhhhc----CC--CCCCCHHHHhhcCCCcccccccHHHHHHhcCCC-ccc-ccccc
Q 007728 30 TRNAATFQETVLAEILSRN-ANSEYLQRY----KL--GGATDRETFKLKLPVITYEDIKPDIQRMADGDR-SAV-LLASP 100 (591)
Q Consensus 30 ~~~~~~~Q~~~L~~iL~~~-~~t~ygr~~----gf--~~i~s~edf~~~vPl~~Yed~~p~ier~~~Ge~-~~l-l~~~p 100 (591)
.++.++.|.+.|+++|++. ++++|||++ |+ ++|++++||+ ++|+++++|++...... .+. ... .+.+.
T Consensus 11 ~~~l~~~q~~rl~~~l~~a~~~spfYr~~~~~~g~~p~~i~sl~dl~-~lP~~~k~~lr~~~p~~--~~~~~~~~~~~~~ 87 (445)
T TIGR03335 11 RGELDALVEERIRYTVHYAAEHSPFYKKWFQENNISPSDIKSHEDLL-ELPVISGEVIRKNQPPV--TDDFMFKSADWKD 87 (445)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCCHHHHHhcCCcc--ccccccccCCHHH
Confidence 5778999999999999985 899999974 65 4799999996 79999999997754100 010 011 13455
Q ss_pred cceeecccccCCCccccccCChHHHHHHHHHHHHHHHHHhccCCCCCCCCeEEEEecCCCccCCCCceecccCCcccCcc
Q 007728 101 ISEFLKSSGTSSGEQKLFPSTQEELDRRHFQISLLRAVMNRCVPDLDKGKGLYFLFVRPETRTPGGLLVRPASNSMYKSD 180 (591)
Q Consensus 101 i~~f~~TSGTT~G~~K~iP~T~~~l~~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip~g~~s~~~~~~~ 180 (591)
+.++..||||| |+||.+++|+..+..+....... .. .-++..|+.+..+++.. ...++.
T Consensus 88 i~~i~~TSGTT-G~Pk~v~~T~~dl~~~~~~~~r~--~~---~~G~~~gD~vl~~~~~~--~~~g~~------------- 146 (445)
T TIGR03335 88 IYTIHETSGTS-GTPKSFFLTWDDWKRYAEKYARS--FV---SQGFTAGDRMVICASYG--MNVGAN------------- 146 (445)
T ss_pred eEEEEeCCCCC-CCcceeeecHHHHHHHHHHHHHH--HH---HcCCCCCCeEEEEecCC--cchhHH-------------
Confidence 66788899999 89999999998776543222111 00 12345565544432110 111111
Q ss_pred hhhcccccccCchhhhhcCChhhhHHHHHHhhcccccceeEEeecchHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCh
Q 007728 181 HFKTRLHDYTSPIEAILCADSFQSMYTHMLCGLLEREQVLRLGALFASGLLRAMRFLQIHWQALANDIETGTLNQKITDP 260 (591)
Q Consensus 181 ~~~~~~~~~~~P~ev~~~~d~~~~~Y~~ll~~L~~~~~~~~i~~~~~~~ll~~~~~l~~~w~~l~~dI~~g~~~~~~~~~ 260 (591)
...+..+.+|. .+ +.... ... .++.|++..+..
T Consensus 147 ----------------------~~~~~~~~~Ga----~v--i~~~~---~~~-----------~~~~i~~~~~t~----- 179 (445)
T TIGR03335 147 ----------------------TMTLAAREVGM----SI--IPEGK---CTF-----------PIRIIESYRPTG----- 179 (445)
T ss_pred ----------------------HHHHHHHHcCC----EE--EcCCc---hhH-----------HHHHHHHhCCCE-----
Confidence 00011111121 11 11000 000 122223222211
Q ss_pred hhhhHHhhhcCCcHHHHHHHHHHhccccccccccccCCCCceeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccc
Q 007728 261 SIRDCMARILKPRPELAELIRMECSEENWEGIIARIWPNTKYLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSEC 337 (591)
Q Consensus 261 ~~r~~l~~~l~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg 337 (591)
+-..|..+.+|.+.+.+.+ +... .++ ++.+++||. ...++.+++.| |++++ +.||+||+
T Consensus 180 ---------l~~~ps~ll~La~~~~~~g---~~~~-~~~---lr~ii~gGE~l~~~~r~~ie~~~-g~~v~-~~YG~TE~ 241 (445)
T TIGR03335 180 ---------IVASVFKLLRLARRMKAEG---IDPA-ESS---IRRLVVGGESFADESRNYVEELW-GCEVY-NTYGSTEG 241 (445)
T ss_pred ---------EEECHHHHHHHHHHHHHcC---CCcc-cCc---ceEEEEcCCCCCHHHHHHHHHHh-CCcEE-ecCChhhh
Confidence 1113333334433333321 2111 234 678888873 45678888888 79999 99999997
Q ss_pred cccccCCCCCCCCCCceeecCCCeEEEEEECCCCCCCCCCCCCCCccccccccCCCceEEEEEccc--------cceecc
Q 007728 338 FFGLNLNPMCKTSEASYTIMPNMAYFEFLLHDPGSPASTSDFQPPKLVDLVDVEVGKEYEPIITNY--------TGVYRY 409 (591)
Q Consensus 338 ~~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt~--------~GlyRY 409 (591)
.++ ..|.. ..++|+..+..++|++++++. ..|.+|+.||||+|+. .+|+||
T Consensus 242 ~~~----~~c~~-~~g~h~~~d~~~vEIvDp~~~----------------~~vp~Ge~GELvvT~L~~~~~r~~~PliRY 300 (445)
T TIGR03335 242 TMC----GECQA-VAGLHVPEDLVHLDVYDPRHQ----------------RFLPDGECGRIVLTTLLKPGERCGSLLINY 300 (445)
T ss_pred hhe----EEecC-CCCccccCCceEEEEEcCCCC----------------CCCcCCCceEEEEEecCCCCccCCceEEEe
Confidence 533 24543 457888888889999986543 1357899999999985 569999
Q ss_pred ccCCEEEEc-ccc----CCCCeEEEeeecCceecccccccCHHHHHHHHHHHH--HhhcccCceEEeeEeeecCCC-CCc
Q 007728 410 KVGDILRVA-GFH----NASPHFHFVRRKDALLSIDYDKTDEADLQKAVENAS--RLLREFDTRILEYTSYAEKKT-NPG 481 (591)
Q Consensus 410 r~GDvV~v~-gf~----~~~P~i~f~gR~~~~l~~~Geki~e~~v~~av~~a~--~~l~~~g~~l~~f~~~~~~~~-~p~ 481 (591)
||||++++. .-. ...|+|..+||.+||+.+.|.++++.+|+++|.+.. ..+ + .+|.+..+... .-.
T Consensus 301 rtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~--~----~~~~~~~~~~~~~~~ 374 (445)
T TIGR03335 301 DTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSL--T----GEYEAFLYGEEEGEI 374 (445)
T ss_pred ecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCC--C----ccEEEEEecCCCCCc
Confidence 999999963 211 233567778999999999999999999999998731 111 1 26776654321 111
Q ss_pred eeEEEEEEeecCCCCCCChHHHHHHHHHHHhhhCHHHHHhhhc--cCccCCeEEEEeCCccHHH
Q 007728 482 HHVIYWEILVKDPANSPTDDVLKQCCLAMEESLDSAYREARVV--DKTIGPLEIRLVKTGTFEE 543 (591)
Q Consensus 482 ~Y~l~~E~~~~~~~~~~~~~~~~~~~~~ld~~Ln~~Y~~~R~~--~g~l~p~~v~~v~~gtf~~ 543 (591)
.-.|.+|.. +. .....+.+.+.+.+.+...++..+.. .+ .-.++|.++++|++++
T Consensus 375 ~~~v~~e~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 431 (445)
T TIGR03335 375 TLRVSLECE--DK----DNCSIHDIQENFTGTFLKYKPELIGSYDEG-IFQILVNFTGPGELEL 431 (445)
T ss_pred eEEEEEEec--Cc----ccchHHHHHHHHHHHHhhhhhhhhhhhhcc-eEEEEEEEeCCCCccc
Confidence 333444442 21 11233344445554421222221111 22 2346899999999874
No 7
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.95 E-value=1.5e-25 Score=243.51 Aligned_cols=388 Identities=14% Similarity=0.134 Sum_probs=227.2
Q ss_pred HHcHHHHHHHHHHHHHHhc-CCChhhhhc----CC--CCCCCHHHHhhcCCCcccccccHHHHH-HhcCCCccccccccc
Q 007728 30 TRNAATFQETVLAEILSRN-ANSEYLQRY----KL--GGATDRETFKLKLPVITYEDIKPDIQR-MADGDRSAVLLASPI 101 (591)
Q Consensus 30 ~~~~~~~Q~~~L~~iL~~~-~~t~ygr~~----gf--~~i~s~edf~~~vPl~~Yed~~p~ier-~~~Ge~~~ll~~~pi 101 (591)
.++.++.|.+.|+++|++. ++++|||++ |+ ++|.+++||+ ++|++++++++..... +.. .+.+.+
T Consensus 5 ~~~l~~~q~~~l~~~~~~a~~~~pfYr~~~~~~~i~~~~i~~~~dl~-~lP~~~K~~l~~~~~~~~~~------~~~~~~ 77 (422)
T TIGR02155 5 LDELRALQTQRLKWTVKHAYENVPHYRKAFDAAGVHPDDLQSLSDLA-KFPFTQKHDLRDNYPFGLFA------VPREQV 77 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHcCCChhhCCCHHHHH-HCCCCcHHHHhhcCCCcccC------CChHHc
Confidence 4678899999999999995 899999975 55 4789999996 7999999999865321 111 123445
Q ss_pred ceeecccccCCCccccccCChHHHHHHHHHHHHHHHHHhccCCCCCCCCeEEEEecCCCccCCCCceecccCCcccCcch
Q 007728 102 SEFLKSSGTSSGEQKLFPSTQEELDRRHFQISLLRAVMNRCVPDLDKGKGLYFLFVRPETRTPGGLLVRPASNSMYKSDH 181 (591)
Q Consensus 102 ~~f~~TSGTT~G~~K~iP~T~~~l~~~~~~~~~~~~~~~~~~p~~~~gk~l~~~~~~~~~~t~~Gip~g~~s~~~~~~~~ 181 (591)
.++..||||| |+||.+++|+..+..+...... .+ ..-++.+|+.+...++. ....+|++
T Consensus 78 ~~~~~TSGTT-G~Pk~v~~t~~~~~~~~~~~~~---~~--~~~g~~~~d~~~~~~~~--~~~~~~~~------------- 136 (422)
T TIGR02155 78 VRIHASSGTT-GKPTVVGYTQNDIDTWSSVVAR---SI--RAAGGRPGDLIHNAYGY--GLFTGGLG------------- 136 (422)
T ss_pred EEEEECCCCC-CCCeEeccCHHHHHHHHHHHHH---HH--HHcCCCCCcEEEEccCc--cccchhHH-------------
Confidence 5777999999 8999999999876543222110 11 11234556543322111 01111110
Q ss_pred hhcccccccCchhhhhcCChhhhHHHHHHhhcccccceeEEeecchHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCChh
Q 007728 182 FKTRLHDYTSPIEAILCADSFQSMYTHMLCGLLEREQVLRLGALFASGLLRAMRFLQIHWQALANDIETGTLNQKITDPS 261 (591)
Q Consensus 182 ~~~~~~~~~~P~ev~~~~d~~~~~Y~~ll~~L~~~~~~~~i~~~~~~~ll~~~~~l~~~w~~l~~dI~~g~~~~~~~~~~ 261 (591)
..|..+.+|. .+..++...+ +.+++.|++..+..-+.
T Consensus 137 ----------------------~~~~~~~~g~----~~~~~~~~~~--------------~~~~~~i~~~~~t~l~~--- 173 (422)
T TIGR02155 137 ----------------------AHYGAEKLGC----TVVPISGGQT--------------EKQVQLIQDFKPDIIMV--- 173 (422)
T ss_pred ----------------------HHHHHHHcCc----EEEecCCCCH--------------HHHHHHHHHHCCCEEEE---
Confidence 0111112222 1111221111 12233333333222111
Q ss_pred hhhHHhhhcCCcHHHHHHHHHHhccccccccccccCCCCceeeEEEecCh---HHHHHHHHHHhCCCCeecccccccccc
Q 007728 262 IRDCMARILKPRPELAELIRMECSEENWEGIIARIWPNTKYLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECF 338 (591)
Q Consensus 262 ~r~~l~~~l~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~ 338 (591)
.|..+..|.+...+.+. .+. . +. ++.+++||. ...++.+++.| |++++ +.||+||+.
T Consensus 174 -----------~Ps~l~~L~~~~~~~~~--~~~-~-~~---lr~i~~~ge~l~~~~~~~i~~~~-g~~v~-~~YG~tE~~ 233 (422)
T TIGR02155 174 -----------TPSYMLNLLEELKRMGI--DPA-Q-TS---LQVGIFGAEPWTNAMRKEIEARL-GMKAT-DIYGLSEVI 233 (422)
T ss_pred -----------cHHHHHHHHHHHHHcCC--Ccc-c-Cc---eEEEEEeCCcCCHHHHHHHHHHh-CCceE-ecccchhhc
Confidence 44444444433322211 011 1 13 777777773 56778888889 79998 999999963
Q ss_pred -ccccCCCCCCCCCCceeecCCCeEEEEEECCCCCCCCCCCCCCCccccccccCCCceEEEEEccc----cceeccccCC
Q 007728 339 -FGLNLNPMCKTSEASYTIMPNMAYFEFLLHDPGSPASTSDFQPPKLVDLVDVEVGKEYEPIITNY----TGVYRYKVGD 413 (591)
Q Consensus 339 -~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt~----~GlyRYr~GD 413 (591)
.++. ..|.....++++..+..+.|++++++. .+|.+|+.||||+|+. ..+.||+|||
T Consensus 234 ~~~~~--~~~~~~~~g~~~~~~~~~~eivd~~~g----------------~~v~~Ge~Gelvvt~~~~~~~p~~ry~TGD 295 (422)
T TIGR02155 234 GPGVA--MECVETQDGLHIWEDHFYPEIIDPHTG----------------EVLPDGEEGELVFTTLTKEALPVIRYRTRD 295 (422)
T ss_pred CCcee--ecccccCCCceEecCeeEEEEECCCCC----------------CCCCCCCeeEEEEecCCccccceeeEEcCc
Confidence 2221 234322456777666678899875433 1456899999999963 2478999999
Q ss_pred EEEEccc-cCCCCeE-EEeeecCceecccccccCHHHHHHHHHHHHHhhcccCceEEeeEeeecCCCCCceeEEEEEEee
Q 007728 414 ILRVAGF-HNASPHF-HFVRRKDALLSIDYDKTDEADLQKAVENASRLLREFDTRILEYTSYAEKKTNPGHHVIYWEILV 491 (591)
Q Consensus 414 vV~v~gf-~~~~P~i-~f~gR~~~~l~~~Geki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~p~~Y~l~~E~~~ 491 (591)
++++..- -...|++ .|.||.+|++++.|++|++.+|+.+|.+. .++. ..|.+..+..+.+-..++++|...
T Consensus 296 l~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~------~~v~-~~~q~~~~~~~~~~~~~~~v~~~~ 368 (422)
T TIGR02155 296 LTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKM------DELS-PHYQLELTRNGHMDELTLKVELKP 368 (422)
T ss_pred EEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhC------cCcC-CCEEEEEEcCCCccEEEEEEEEec
Confidence 9998641 0223444 89999999999999999999999999763 2321 145554443222225667777742
Q ss_pred cCCCCCCChHHHHHHHHHHHhhhCHHHHHhhhccCccCCeEEEEeCCccHHH
Q 007728 492 KDPANSPTDDVLKQCCLAMEESLDSAYREARVVDKTIGPLEIRLVKTGTFEE 543 (591)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~ld~~Ln~~Y~~~R~~~g~l~p~~v~~v~~gtf~~ 543 (591)
+.......+..+.+++.|.+.+ |...| ..++|.++..|++.+
T Consensus 369 -~~~~~~~~~~~~~~~~~i~~~~-------~~~~~--~~~~v~~~~~~~lp~ 410 (422)
T TIGR02155 369 -ESYTLRLHEQASLLAGEIQHTI-------KQEVG--VSMDVHLVEPGSLPR 410 (422)
T ss_pred -CcccccchHHHHHHHHHHHHHH-------HhccC--cEEEEEEECCCCccC
Confidence 1100011223333445555555 43332 236799999999863
No 8
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.88 E-value=1.1e-20 Score=204.59 Aligned_cols=320 Identities=19% Similarity=0.288 Sum_probs=196.8
Q ss_pred HHcHHHHHHHHHHHHHHhc-CCChhhhhcCCCCCCCHHHHhhcCCCcccccccHHHHHHhcCC--Cccc----cc-----
Q 007728 30 TRNAATFQETVLAEILSRN-ANSEYLQRYKLGGATDRETFKLKLPVITYEDIKPDIQRMADGD--RSAV----LL----- 97 (591)
Q Consensus 30 ~~~~~~~Q~~~L~~iL~~~-~~t~ygr~~gf~~i~s~edf~~~vPl~~Yed~~p~ier~~~Ge--~~~l----l~----- 97 (591)
.+.+++.|++.|+++|++. ++|+|||++. ++ +++ ++|++++++++...+++.... .+.. +.
T Consensus 21 ~~~l~~~Q~~rL~~ll~~a~~~sPfYr~~~--~~----~l~-~lPvl~K~~~~~~fd~~~t~~l~~~~~~~~a~~~e~~r 93 (430)
T TIGR02304 21 REALENWQAKQLEKFLQFVLSHSPWFQRYH--TI----PFN-QWPMMDKALMMEHFDELNTAGLKKDEALDCAMRSEKTR 93 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhhhhcc--CC----CHH-HCCCcCHHHHHHHHHHhhccCCChhhhhHHhhhhhhhc
Confidence 4578999999999999995 9999999872 33 574 799999999999999997421 1100 01
Q ss_pred -----ccccceeecccccCCCccccccCChHHHHHHHHHHHHHHHHHhccCC-CCCCC-CeEEEEecCCCccCCCCceec
Q 007728 98 -----ASPISEFLKSSGTSSGEQKLFPSTQEELDRRHFQISLLRAVMNRCVP-DLDKG-KGLYFLFVRPETRTPGGLLVR 170 (591)
Q Consensus 98 -----~~pi~~f~~TSGTT~G~~K~iP~T~~~l~~~~~~~~~~~~~~~~~~p-~~~~g-k~l~~~~~~~~~~t~~Gip~g 170 (591)
.+.+ ....||||| |+|-.|.++++....+.. ..+.+..| ++..| +...+.-+.. .+
T Consensus 94 ~f~~~~~~~-~v~~TSGSS-G~p~~f~~~~~~~~~~~a------~~~~~~~~~g~~~g~r~a~~~~~~~------~l--- 156 (430)
T TIGR02304 94 DFKPCVGNI-SVGLSSGTS-GRRGLFVVSPEEQQMWAG------GILAKVLPDGLFAKHRIAFFLRADN------NL--- 156 (430)
T ss_pred ccccccCcE-EEEECCCCC-CCceEEEECHHHHHHHHH------HHHhhhCccccccCCcEEEEEccCh------hH---
Confidence 1233 567899999 899999999986543311 11223334 44554 3333310110 00
Q ss_pred ccCCcccCcchhhcccccccCchhhhhcCChhhhHHHHHHhhcccccceeEEeecchHHHHHHHHHHHHHHHHHHHHHHh
Q 007728 171 PASNSMYKSDHFKTRLHDYTSPIEAILCADSFQSMYTHMLCGLLEREQVLRLGALFASGLLRAMRFLQIHWQALANDIET 250 (591)
Q Consensus 171 ~~s~~~~~~~~~~~~~~~~~~P~ev~~~~d~~~~~Y~~ll~~L~~~~~~~~i~~~~~~~ll~~~~~l~~~w~~l~~dI~~ 250 (591)
+ +...++ .+. +..+++. +..++.++.|.+
T Consensus 157 ------y--~~~~~~--------------------------------~~~----------~~~~~l~-~~~~~~l~~L~~ 185 (430)
T TIGR02304 157 ------Y--QSVNNR--------------------------------WIS----------LDFFDLL-APFQAHIKRLNQ 185 (430)
T ss_pred ------H--HHHHhc--------------------------------cce----------eeecCCC-cCHHHHHHHHHH
Confidence 0 000000 000 0112222 445555666665
Q ss_pred ccCCCCCCChhhhhHHhhhcCCcHHHHHHHHHHhccccccccccccCCCCceeeEEEecCh---HHHHHHHHHHhCCCCe
Q 007728 251 GTLNQKITDPSIRDCMARILKPRPELAELIRMECSEENWEGIIARIWPNTKYLDAVATGSM---AQYIHLLDYYSGSLPI 327 (591)
Q Consensus 251 g~~~~~~~~~~~r~~l~~~l~~~p~~A~~L~~~~~~~~~~g~~~~lWP~l~~l~~~~~g~~---~~y~~~l~~~~~g~~v 327 (591)
-.+.--+. .|..+.+|.+.+.++ |+ ++ . ++.++++|. ...++.+++.| |++|
T Consensus 186 ~~P~~L~g--------------~pS~l~~LA~~~~~~---~l--~~--~---~k~ii~~~E~l~~~~r~~Ie~~f-g~~V 240 (430)
T TIGR02304 186 RKPSIIVA--------------PPSVLRALALEVMEG---EL--TI--K---PKKVISVAEVLEPQDRELIRNVF-KNTV 240 (430)
T ss_pred hCCCEEEE--------------cHHHHHHHHHHHHhc---CC--CC--C---ceEEEEccCCCCHHHHHHHHHHh-CCCe
Confidence 54333222 455555555544443 12 22 2 456666662 56678899999 8999
Q ss_pred eccccccccccccccCCCCCCCCCCceeecCCCeEEEEEECCCCCCCCCCCCCCCccccccccCCCceEEEEEccc----
Q 007728 328 ASMLYSSSECFFGLNLNPMCKTSEASYTIMPNMAYFEFLLHDPGSPASTSDFQPPKLVDLVDVEVGKEYEPIITNY---- 403 (591)
Q Consensus 328 ~~~~ygaSEg~~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt~---- 403 (591)
+ +.||+|||+++ .+|. +++||+..+..++|+..+|+. | .++.|||+.
T Consensus 241 ~-~~YG~tEg~la----~eC~--~g~lHl~ed~~~vE~~ivD~~---------------------~-~~~~ViT~L~n~~ 291 (430)
T TIGR02304 241 H-QIYQATEGFLA----STCR--CGTLHLNEDLVHIEKQYLDEH---------------------K-RFVPIITDFTRTT 291 (430)
T ss_pred e-EccCCchhheE----EecC--CCCEEEccccEEEEeeEECCC---------------------C-ceEEEEecCCCcc
Confidence 9 89999998665 4664 457999999999994222221 1 234599974
Q ss_pred cceeccccCCEEEEcccc----CCCCeE-EEeeecCceecc---ccccc--CHHHHHHHHHHHHHhhcccCceEEeeEee
Q 007728 404 TGVYRYKVGDILRVAGFH----NASPHF-HFVRRKDALLSI---DYDKT--DEADLQKAVENASRLLREFDTRILEYTSY 473 (591)
Q Consensus 404 ~GlyRYr~GDvV~v~gf~----~~~P~i-~f~gR~~~~l~~---~Geki--~e~~v~~av~~a~~~l~~~g~~l~~f~~~ 473 (591)
.+|+||+|||++++.+-. ...|+| ++.||.+|++.+ +|..+ ++..+..+|.... .+ +.+|.++
T Consensus 292 ~PlIRYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~-----~~--i~~yQi~ 364 (430)
T TIGR02304 292 QPIVRYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTL-----PL--IVEYRVL 364 (430)
T ss_pred ceEEeeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcC-----CC--CceEEEE
Confidence 569999999999876422 223467 599999999864 56554 8888888766532 23 4578776
Q ss_pred ecCCCCCceeEEEEE
Q 007728 474 AEKKTNPGHHVIYWE 488 (591)
Q Consensus 474 ~~~~~~p~~Y~l~~E 488 (591)
.. .+.+.+|.+.
T Consensus 365 Q~---~~~~l~v~~~ 376 (430)
T TIGR02304 365 QT---GSAQLELIAD 376 (430)
T ss_pred Ec---cCCeEEEEEE
Confidence 54 3556665543
No 9
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.67 E-value=5.1e-16 Score=160.17 Aligned_cols=131 Identities=15% Similarity=0.202 Sum_probs=103.7
Q ss_pred CCceeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCCCCCC-----CceeecCCCeEEEEEECCC
Q 007728 299 NTKYLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCKTSE-----ASYTIMPNMAYFEFLLHDP 370 (591)
Q Consensus 299 ~l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~~-----~~~~l~~~~~~~EFip~~~ 370 (591)
.|++++.+-.||+ +...+++...+ ||.++ ..||+.||.+.+.- .++|.+ .+..+.| .-|..-+|+
T Consensus 303 ~LsSLrllQVGGarl~~~~Arrv~~~l-gC~LQ-QVFGMAEGLvnyTR--LDDp~E~i~~TQGrPlsP---~DEvrvvD~ 375 (542)
T COG1021 303 DLSSLRLLQVGGARLSATLARRVPAVL-GCQLQ-QVFGMAEGLVNYTR--LDDPPEIIIHTQGRPLSP---DDEVRVVDA 375 (542)
T ss_pred CchheeEEeecCcccCHHHHhhchhhh-CchHH-HHhhhhhhhhcccc--cCCchHheeecCCCcCCC---cceeEEecC
Confidence 5677899999996 46678888888 89999 99999999876532 222211 2333333 356666554
Q ss_pred CCCCCCCCCCCCccccccccCCCceEEEEEc---cccceec--------------cccCCEEEEccccCCCCeEEEeeec
Q 007728 371 GSPASTSDFQPPKLVDLVDVEVGKEYEPIIT---NYTGVYR--------------YKVGDILRVAGFHNASPHFHFVRRK 433 (591)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~ev~~G~~yelvvT---t~~GlyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~ 433 (591)
.+ .+|.+||.|+|.+. |..|+|| ||+||+|+.+ ....+.+.||.
T Consensus 376 dg---------------~pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~----~dGyl~V~GR~ 436 (542)
T COG1021 376 DG---------------NPVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRD----PDGYLVVEGRV 436 (542)
T ss_pred CC---------------CCCCCCCcceeeecCCeeeeeeccCchhhhhccCcCCceecCceeEec----CCceEEEEeee
Confidence 43 36789999999984 8999998 9999999997 47899999999
Q ss_pred CceecccccccCHHHHHHHHHH
Q 007728 434 DALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 434 ~~~l~~~Geki~e~~v~~av~~ 455 (591)
||.||++||||-.+|||+.+..
T Consensus 437 KDQINRgGEKIAAeEvEn~LL~ 458 (542)
T COG1021 437 KDQINRGGEKIAAEEVENLLLR 458 (542)
T ss_pred hhhhccccchhhHHHHHHHHhh
Confidence 9999999999999999999876
No 10
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=99.57 E-value=6.6e-13 Score=152.36 Aligned_cols=233 Identities=13% Similarity=0.076 Sum_probs=130.8
Q ss_pred CceeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCC---CCCCCCceeecCCCeEEEEEECCCCCC
Q 007728 300 TKYLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPM---CKTSEASYTIMPNMAYFEFLLHDPGSP 373 (591)
Q Consensus 300 l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~---~~~~~~~~~l~~~~~~~EFip~~~~~~ 373 (591)
++.|+.+.+||. ....+.+++.+ |++++ +.||+||+...+..... .+....+.. .| +.-.++++.+ +
T Consensus 379 l~~Lr~i~~~G~~l~~~~~~~~~~~~-g~~i~-~~yG~TE~~~~~~~~~~~~~~~~~s~G~p-~~-g~~~~i~d~~--g- 451 (647)
T PTZ00237 379 LSNLKEIWCGGEVIEESIPEYIENKL-KIKSS-RGYGQTEIGITYLYCYGHINIPYNATGVP-SI-FIKPSILSED--G- 451 (647)
T ss_pred cchheEEEecCccCCHHHHHHHHHhc-CCCEE-eeechHHhChhhhccCCCCCCCCCCCccC-cC-CceEEEECCC--C-
Confidence 345788888885 34556777777 69998 99999997532211110 000111111 11 2234444422 1
Q ss_pred CCCCCCCCCccccccccCCCceEEEEEcc------ccceec---------------cccCCEEEEccccCCCCeEEEeee
Q 007728 374 ASTSDFQPPKLVDLVDVEVGKEYEPIITN------YTGVYR---------------YKVGDILRVAGFHNASPHFHFVRR 432 (591)
Q Consensus 374 ~~~~~~~~~~~~~~~ev~~G~~yelvvTt------~~GlyR---------------Yr~GDvV~v~gf~~~~P~i~f~gR 432 (591)
.+|.+|+.|||+++. ..|||+ |+|||+++++ ....+.|+||
T Consensus 452 --------------~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d----~dG~l~i~GR 513 (647)
T PTZ00237 452 --------------KELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKD----ENGYYTIVSR 513 (647)
T ss_pred --------------CCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEEC----CCCeEEEEec
Confidence 245679999999963 356662 8999999996 4678999999
Q ss_pred cCceecccccccCHHHHHHHHHHHHHhhcccCceEEeeEeeecC-CCCCceeEEEEEEeecCCCCCCChHHHHHHHHHHH
Q 007728 433 KDALLSIDYDKTDEADLQKAVENASRLLREFDTRILEYTSYAEK-KTNPGHHVIYWEILVKDPANSPTDDVLKQCCLAME 511 (591)
Q Consensus 433 ~~~~l~~~Geki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~-~~~p~~Y~l~~E~~~~~~~~~~~~~~~~~~~~~ld 511 (591)
.+|+|++.|++|++.+||++|.+. + + |.+-+++.-. ......-+.|+.+.........+ .+.+.++|.
T Consensus 514 ~dd~i~~~G~rI~p~eIE~~l~~~-p-----~--V~eaavvg~~~~~~g~~~~a~Vv~~~~~~~~~~~---~~~l~~~i~ 582 (647)
T PTZ00237 514 SDDQIKISGNKVQLNTIETSILKH-P-----L--VLECCSIGIYDPDCYNVPIGLLVLKQDQSNQSID---LNKLKNEIN 582 (647)
T ss_pred cCCEEEECCEEeCHHHHHHHHHhC-C-----C--ceeeEEEeeEcCCCCCEEEEEEEeccCccccCCC---HHHHHHHHH
Confidence 999999999999999999999863 1 2 2343333211 11111233455443110000111 122233333
Q ss_pred hhhCHHHHHhhhccCcc-CCeEEEEeCC---ccHHHHHHHHHhcCCCCCCCccccccCCHhHHHHHhh
Q 007728 512 ESLDSAYREARVVDKTI-GPLEIRLVKT---GTFEELMDYAISRGASINQYKVARCVGSTSILKLLDS 575 (591)
Q Consensus 512 ~~Ln~~Y~~~R~~~g~l-~p~~v~~v~~---gtf~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~ 575 (591)
+.+ |.+.+.. .|-+|.+|+. -.=.+.++..+.+=....++..|.-+.|++.++.|++
T Consensus 583 ~~~-------~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (647)
T PTZ00237 583 NII-------TQDIESLAVLRKIIIVNQLPKTKTGKIPRQIISKFLNDSNYQLPDNVNDSEIFYKIKE 643 (647)
T ss_pred HHH-------HhhcCccccCcEEEEcCCCCCCCCccEeHHHHHHHHcCCCCCCCccccCHHHHHHHHH
Confidence 222 2112222 3435555432 1112333333332122347888999999999999865
No 11
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.55 E-value=7.5e-12 Score=142.78 Aligned_cols=229 Identities=15% Similarity=0.112 Sum_probs=127.3
Q ss_pred CceeeEEEecCh---HHHHHHHHHHhC--CCCeeccccccccccccccC-CC---CCCCCCCceeecCCCeEEEEEECCC
Q 007728 300 TKYLDAVATGSM---AQYIHLLDYYSG--SLPIASMLYSSSECFFGLNL-NP---MCKTSEASYTIMPNMAYFEFLLHDP 370 (591)
Q Consensus 300 l~~l~~~~~g~~---~~y~~~l~~~~~--g~~v~~~~ygaSEg~~~i~~-~~---~~~~~~~~~~l~~~~~~~EFip~~~ 370 (591)
++.|+.+.+||. ....+.+.+.++ +++++ +.||+||+...+.. .+ ...+...+.. .+ +.-.+.++ +
T Consensus 357 l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~-~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p-~~-g~~~~i~d--~ 431 (625)
T TIGR02188 357 LSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIV-DTWWQTETGGIMITPLPGATPTKPGSATLP-FF-GIEPAVVD--E 431 (625)
T ss_pred ccceeEEEEecCCCCHHHHHHHHHHcCCCCCceE-ecccccccCCceeecCCCCCCcCCCcccCC-cC-CceEEEEC--C
Confidence 344888888885 344456666664 48998 99999997432111 01 0111111211 12 22344443 2
Q ss_pred CCCCCCCCCCCCccccccccC-CCceEEEEEcc-----ccceec----------------cccCCEEEEccccCCCCeEE
Q 007728 371 GSPASTSDFQPPKLVDLVDVE-VGKEYEPIITN-----YTGVYR----------------YKVGDILRVAGFHNASPHFH 428 (591)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~ev~-~G~~yelvvTt-----~~GlyR----------------Yr~GDvV~v~gf~~~~P~i~ 428 (591)
.+ ..+. +|+.|||+|+. ..|+|. |+|||+++++. ...+.
T Consensus 432 ~g---------------~~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~----dG~l~ 492 (625)
T TIGR02188 432 EG---------------NPVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDK----DGYIW 492 (625)
T ss_pred CC---------------CCCCCCCCeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcC----CCcEE
Confidence 11 1345 79999999975 234441 99999999963 56899
Q ss_pred EeeecCceecccccccCHHHHHHHHHHHHHhhcccCceEEeeEeeecCCCCCc-eeEEEEEEeecCCCCCCChHHHHHHH
Q 007728 429 FVRRKDALLSIDYDKTDEADLQKAVENASRLLREFDTRILEYTSYAEKKTNPG-HHVIYWEILVKDPANSPTDDVLKQCC 507 (591)
Q Consensus 429 f~gR~~~~l~~~Geki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~p~-~Y~l~~E~~~~~~~~~~~~~~~~~~~ 507 (591)
|+||.+|+|++.|++|.+.+||++|.+. .+ |.+..++.-.....+ .-+.|+.+.. +. ..+.+..+++.
T Consensus 493 i~GR~dd~i~~~G~ri~p~eIE~~l~~~------p~--V~e~~vvg~~~~~~g~~~~a~vv~~~-~~--~~~~~~~~~l~ 561 (625)
T TIGR02188 493 ITGRVDDVINVSGHRLGTAEIESALVSH------PA--VAEAAVVGIPDDIKGQAIYAFVTLKD-GY--EPDDELRKELR 561 (625)
T ss_pred EEecccCEEEeCCEEECHHHHHHHHHhC------CC--cceEEEEeeEcCCCCeEEEEEEEeCC-CC--CCCHHHHHHHH
Confidence 9999999999999999999999999763 22 334544331111112 2335666642 21 12222233333
Q ss_pred HHHHhhhCHHHHHhhhccCc-cCCeEEEEeC------CccHHHHHHHHHhcCCCCCCCccccccCCHhHHHHHhh
Q 007728 508 LAMEESLDSAYREARVVDKT-IGPLEIRLVK------TGTFEELMDYAISRGASINQYKVARCVGSTSILKLLDS 575 (591)
Q Consensus 508 ~~ld~~Ln~~Y~~~R~~~g~-l~p~~v~~v~------~gtf~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~ 575 (591)
+.+.+.| +. ..|-+|.+++ .|-..+-.=..+..|.. .+++.+--+.|++.++.+++
T Consensus 562 ~~~~~~l-----------~~~~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~-~~~~~~~~~~~p~~~~~~~~ 624 (625)
T TIGR02188 562 KHVRKEI-----------GPIAKPDKIRFVPGLPKTRSGKIMRRLLRKIAAGEE-EILGDTSTLEDPSVVEELIE 624 (625)
T ss_pred HHHHhhc-----------CCCccCcEEEECCCCCCCCCccchHHHHHHHHcCCC-CCCCCcccccCHHHHHHHHh
Confidence 3333333 21 2344444442 33333221111223431 23556667789999988764
No 12
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=99.54 E-value=7e-12 Score=143.44 Aligned_cols=232 Identities=15% Similarity=0.143 Sum_probs=129.5
Q ss_pred ceeeEEEecCh---HHHHHHHHHHhC--CCCeeccccccccccccccCC-C---CCCCCCCceeecCCCeEEEEEECCCC
Q 007728 301 KYLDAVATGSM---AQYIHLLDYYSG--SLPIASMLYSSSECFFGLNLN-P---MCKTSEASYTIMPNMAYFEFLLHDPG 371 (591)
Q Consensus 301 ~~l~~~~~g~~---~~y~~~l~~~~~--g~~v~~~~ygaSEg~~~i~~~-~---~~~~~~~~~~l~~~~~~~EFip~~~~ 371 (591)
..|+.+.+||. ....+.+.+.++ +++++ +.||+||+...+... + .+.+...+.. .+ +.-+++++.+
T Consensus 367 ~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p-~~-g~~~~i~d~~-- 441 (637)
T PRK00174 367 SSLRLLGSVGEPINPEAWEWYYKVVGGERCPIV-DTWWQTETGGIMITPLPGATPLKPGSATRP-LP-GIQPAVVDEE-- 441 (637)
T ss_pred cceeEEEEeCCCCCHHHHHHHHHHhCCCCCceE-ecccccccCCceEecCCCCCCcCCCcccCC-CC-CceEEEECCC--
Confidence 34788888885 344566667674 38999 999999974321110 1 1111112221 12 2234444422
Q ss_pred CCCCCCCCCCCccccccccCCCceEEEEEcc-----cccee----------------ccccCCEEEEccccCCCCeEEEe
Q 007728 372 SPASTSDFQPPKLVDLVDVEVGKEYEPIITN-----YTGVY----------------RYKVGDILRVAGFHNASPHFHFV 430 (591)
Q Consensus 372 ~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt-----~~Gly----------------RYr~GDvV~v~gf~~~~P~i~f~ 430 (591)
+ .++..|+.|||+|+. ..|+| .|+|||+++++ ....+.|+
T Consensus 442 g---------------~~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d----~dG~l~~~ 502 (637)
T PRK00174 442 G---------------NPLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRD----EDGYYWIT 502 (637)
T ss_pred C---------------CCCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEc----CCCcEEEE
Confidence 1 135679999999974 12332 29999999996 36789999
Q ss_pred eecCceecccccccCHHHHHHHHHHHHHhhcccCceEEeeEeeecCCCCCc-eeEEEEEEeecCCCCCCChHHHHHHHHH
Q 007728 431 RRKDALLSIDYDKTDEADLQKAVENASRLLREFDTRILEYTSYAEKKTNPG-HHVIYWEILVKDPANSPTDDVLKQCCLA 509 (591)
Q Consensus 431 gR~~~~l~~~Geki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~p~-~Y~l~~E~~~~~~~~~~~~~~~~~~~~~ 509 (591)
||.+|+|++.|++|.+.+||.+|.+. .+ +.+..++.......+ .-+.|+.+.. +. ..+....+++.+.
T Consensus 503 GR~dd~ik~~G~~v~p~eIE~~l~~~------~~--V~~~~Vvg~~~~~~g~~~~a~vv~~~-~~--~~~~~~~~~l~~~ 571 (637)
T PRK00174 503 GRVDDVLNVSGHRLGTAEIESALVAH------PK--VAEAAVVGRPDDIKGQGIYAFVTLKG-GE--EPSDELRKELRNW 571 (637)
T ss_pred EecccEEEeCCEEECHHHHHHHHHhC------CC--cceEEEEeeEcCCCCeEEEEEEEECC-CC--CCCHHHHHHHHHH
Confidence 99999999999999999999999752 23 234444332111112 2335555531 11 1222223333344
Q ss_pred HHhhhCHHHHHhhhccCccCCeEEEEe------CCccHHHHHHHHHhcCCCCCCCccccccCCHhHHHHHhhcchh
Q 007728 510 MEESLDSAYREARVVDKTIGPLEIRLV------KTGTFEELMDYAISRGASINQYKVARCVGSTSILKLLDSRVIS 579 (591)
Q Consensus 510 ld~~Ln~~Y~~~R~~~g~l~p~~v~~v------~~gtf~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~~~~~ 579 (591)
+.+.|. . ...|-.+.++ +.|-..+-.=..+.+|.. +.+-+.-+.|++.++.+.+.+.+
T Consensus 572 l~~~l~-~---------~~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 635 (637)
T PRK00174 572 VRKEIG-P---------IAKPDVIQFAPGLPKTRSGKIMRRILRKIAEGEE--ILGDTSTLADPSVVEKLIEARQN 635 (637)
T ss_pred HHhhcC-C---------ccCCCEEEEcCCCCCCCCcchHHHHHHHHHcCCC--CCCCcccccCHHHHHHHHHHHhh
Confidence 433331 1 1334455554 234333321111223332 45666677899999988866543
No 13
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=99.53 E-value=7.8e-13 Score=148.39 Aligned_cols=131 Identities=15% Similarity=0.174 Sum_probs=90.1
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCCC---CCCCceeecCCCeEEEEEECCCCCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCK---TSEASYTIMPNMAYFEFLLHDPGSPAST 376 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~---~~~~~~~l~~~~~~~EFip~~~~~~~~~ 376 (591)
++.+++||. ....+++++.+++++++ +.||+||+...+...+... +...+.. .++. -+.+++.+..
T Consensus 301 lr~i~~gG~~l~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~p-~~g~-~v~i~d~~~~----- 372 (539)
T PRK06334 301 LRFVVIGGDAFKDSLYQEALKTFPHIQLR-QGYGTTECSPVITINTVNSPKHESCVGMP-IRGM-DVLIVSEETK----- 372 (539)
T ss_pred ccEEEECCccCCHHHHHHHHHHCCCCeEE-ecccccccCceEEeccCCCCCCCCcCcee-cCCC-EEEEEcCCCC-----
Confidence 788888885 45667788888889998 9999999743221111110 0112221 1222 1222322211
Q ss_pred CCCCCCccccccccCCCceEEEEEcc---cccee---------------ccccCCEEEEccccCCCCeEEEeeecCceec
Q 007728 377 SDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY---------------RYKVGDILRVAGFHNASPHFHFVRRKDALLS 438 (591)
Q Consensus 377 ~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly---------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 438 (591)
.+|.+|+.|||+|.. ..||| -|+|||+++++ ....+.|+||.+|+|+
T Consensus 373 -----------~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d----~~G~l~~~GR~~d~ik 437 (539)
T PRK06334 373 -----------VPVSSGETGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVD----RHGELFLKGRLSRFVK 437 (539)
T ss_pred -----------ccCCCCceEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEEC----CCCeEEEEeccCCeEE
Confidence 246789999999964 45554 29999999996 3678999999999999
Q ss_pred ccccccCHHHHHHHHHHH
Q 007728 439 IDYDKTDEADLQKAVENA 456 (591)
Q Consensus 439 ~~Geki~e~~v~~av~~a 456 (591)
++|++|++.+||.+|.+.
T Consensus 438 ~~G~~v~p~eIE~~l~~~ 455 (539)
T PRK06334 438 IGAEMVSLEALESILMEG 455 (539)
T ss_pred ECCEEECHHHHHHHHHHc
Confidence 999999999999999863
No 14
>PRK07529 AMP-binding domain protein; Validated
Probab=99.51 E-value=3.5e-12 Score=145.98 Aligned_cols=135 Identities=18% Similarity=0.224 Sum_probs=93.1
Q ss_pred ceeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCC---CCCCCceeecCCCeEEEEEECCCCCCC
Q 007728 301 KYLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMC---KTSEASYTIMPNMAYFEFLLHDPGSPA 374 (591)
Q Consensus 301 ~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~---~~~~~~~~l~~~~~~~EFip~~~~~~~ 374 (591)
+.++.+++||. ....+++++.+ |++++ +.||+||+.......+.. .+...+..+ |. .-+.++..++.+.
T Consensus 333 ~slr~v~~gg~~l~~~l~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~~svG~~~-p~-~~v~i~~~d~~g~- 407 (632)
T PRK07529 333 SSLRYALCGAAPLPVEVFRRFEAAT-GVRIV-EGYGLTEATCVSSVNPPDGERRIGSVGLRL-PY-QRVRVVILDDAGR- 407 (632)
T ss_pred cceEEEEEcCCCCCHHHHHHHHHHh-CCcEe-eeecccccCcccccCCccccccCCCccccc-CC-ceEEEEEcCCCCc-
Confidence 34788888884 45667788878 89999 999999985433221111 011122221 22 2345554443210
Q ss_pred CCCCCCCCccccccccCCCceEEEEEcc---cccee-------------ccccCCEEEEccccCCCCeEEEeeecCceec
Q 007728 375 STSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY-------------RYKVGDILRVAGFHNASPHFHFVRRKDALLS 438 (591)
Q Consensus 375 ~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 438 (591)
...++.+|+.|||+|+. ..||+ -|+|||+++++ ....+.|+||.+|+|+
T Consensus 408 -----------~~~~~~~g~~Gel~v~gp~v~~GY~~~~~~~~~~~~~gw~~TGDlg~~d----~dG~l~i~GR~~d~i~ 472 (632)
T PRK07529 408 -----------YLRDCAVDEVGVLCIAGPNVFSGYLEAAHNKGLWLEDGWLNTGDLGRID----ADGYFWLTGRAKDLII 472 (632)
T ss_pred -----------ccccCCCCCceEEEEECCCccccccCCccccccccCCCceEcCcEEEEc----CCceEEEEecccCEEE
Confidence 01245789999999974 45544 28999999996 3678999999999999
Q ss_pred ccccccCHHHHHHHHHH
Q 007728 439 IDYDKTDEADLQKAVEN 455 (591)
Q Consensus 439 ~~Geki~e~~v~~av~~ 455 (591)
++|++|++.+||++|.+
T Consensus 473 ~~G~~i~p~eIE~~l~~ 489 (632)
T PRK07529 473 RGGHNIDPAAIEEALLR 489 (632)
T ss_pred eCCEEECHHHHHHHHHh
Confidence 99999999999999976
No 15
>PRK06060 acyl-CoA synthetase; Validated
Probab=99.48 E-value=1.1e-11 Score=143.48 Aligned_cols=130 Identities=15% Similarity=0.141 Sum_probs=90.8
Q ss_pred eeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCC--CCCCCCceeecCCCeEEEEEECCCCCCCCC
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPM--CKTSEASYTIMPNMAYFEFLLHDPGSPAST 376 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~--~~~~~~~~~l~~~~~~~EFip~~~~~~~~~ 376 (591)
.++++++||. ....+++.+.+++++++ +.||+||+...+..... ..+...+. ..++ ..+++++.+.
T Consensus 261 slr~i~~gGe~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~iG~-p~~~-~~v~i~d~~g------ 331 (705)
T PRK06060 261 SLRCVVSAGEALELGLAERLMEFFGGIPIL-DGIGSTEVGQTFVSNRVDEWRLGTLGR-VLPP-YEIRVVAPDG------ 331 (705)
T ss_pred ceeEEEEecCcCCHHHHHHHHHHcCCCceE-eeeeccccCceEEeccCCCCCcCcccc-cCCC-cEEEEECCCC------
Confidence 3788888884 45667788888789999 99999997432211111 01111121 1222 2344554321
Q ss_pred CCCCCCccccccccCCCceEEEEEcc---ccceec-----------cccCCEEEEccccCCCCeEEEeeecCceeccccc
Q 007728 377 SDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR-----------YKVGDILRVAGFHNASPHFHFVRRKDALLSIDYD 442 (591)
Q Consensus 377 ~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR-----------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~Ge 442 (591)
..+.+|+.|||+|+. ..|||. |+|||++++.. ...+.|+||.+|+++++|+
T Consensus 332 -----------~~~~~g~~GEl~i~g~~v~~GY~~~~~~~~~~~~~~~TGDl~~~~~----dG~l~~~GR~dd~ik~~G~ 396 (705)
T PRK06060 332 -----------TTAGPGVEGDLWVRGPAIAKGYWNRPDSPVANEGWLDTRDRVCIDS----DGWVTYRCRADDTEVIGGV 396 (705)
T ss_pred -----------CCCCCCCceEEEEccchhhhhhhCCCcccccCCCcEECCeeEEECC----CceEEEecccCceEEECCE
Confidence 135679999999974 456653 99999999863 5689999999999999999
Q ss_pred ccCHHHHHHHHHH
Q 007728 443 KTDEADLQKAVEN 455 (591)
Q Consensus 443 ki~e~~v~~av~~ 455 (591)
+|...+||.+|.+
T Consensus 397 ~v~~~eIE~~l~~ 409 (705)
T PRK06060 397 NVDPREVERLIIE 409 (705)
T ss_pred EECHHHHHHHHHh
Confidence 9999999999976
No 16
>PLN02654 acetate-CoA ligase
Probab=99.47 E-value=7.1e-11 Score=136.13 Aligned_cols=229 Identities=11% Similarity=0.110 Sum_probs=127.3
Q ss_pred CCceeeEEEecCh---HHHHHHHHHHhCC--CCeecccccccccccc-ccCCCCC---CCCCCceeecCCCeEEEEEECC
Q 007728 299 NTKYLDAVATGSM---AQYIHLLDYYSGS--LPIASMLYSSSECFFG-LNLNPMC---KTSEASYTIMPNMAYFEFLLHD 369 (591)
Q Consensus 299 ~l~~l~~~~~g~~---~~y~~~l~~~~~g--~~v~~~~ygaSEg~~~-i~~~~~~---~~~~~~~~l~~~~~~~EFip~~ 369 (591)
+++.++.+.+||. ....+.+.+.+|+ +++. +.||+||+... +...+.+ .++..+.. .|+. -...++
T Consensus 395 ~l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~-~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p-~~g~-~v~i~d-- 469 (666)
T PLN02654 395 SRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPIS-DTWWQTETGGFMITPLPGAWPQKPGSATFP-FFGV-QPVIVD-- 469 (666)
T ss_pred ChhheeEEEEecCCCCHHHHHHHHHHhCCCCCcee-ccccccccCCeeeccCCCCCCCCCCccCCC-CCCc-eEEEEC--
Confidence 3445788888885 3444566667753 7888 99999996321 1111111 11111221 1221 123332
Q ss_pred CCCCCCCCCCCCCccccccccCCCceEEEEEcc-----ccceec----------------cccCCEEEEccccCCCCeEE
Q 007728 370 PGSPASTSDFQPPKLVDLVDVEVGKEYEPIITN-----YTGVYR----------------YKVGDILRVAGFHNASPHFH 428 (591)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt-----~~GlyR----------------Yr~GDvV~v~gf~~~~P~i~ 428 (591)
+.+ .++..|+.|||+|+. ..|+|. |+|||+++++ ....+.
T Consensus 470 ~~g---------------~~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d----~dG~l~ 530 (666)
T PLN02654 470 EKG---------------KEIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRD----KDGYYW 530 (666)
T ss_pred CCC---------------CCCCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEEC----CCCcEE
Confidence 221 134567789999974 234442 8999999996 367899
Q ss_pred EeeecCceecccccccCHHHHHHHHHHHHHhhcccCceEEeeEeee--cCCCCCceeEEEEEEeecCCCCCCChHHHHHH
Q 007728 429 FVRRKDALLSIDYDKTDEADLQKAVENASRLLREFDTRILEYTSYA--EKKTNPGHHVIYWEILVKDPANSPTDDVLKQC 506 (591)
Q Consensus 429 f~gR~~~~l~~~Geki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~--~~~~~p~~Y~l~~E~~~~~~~~~~~~~~~~~~ 506 (591)
|+||.+|+|++.|++|++.+||.+|.+. .+ +.+-.++. +.. ..-.-+.|+.++. +. ..+.+..+++
T Consensus 531 i~GR~dd~I~~~G~ri~p~EIE~~l~~~------p~--V~eaaVvg~~d~~-~ge~~~a~Vvl~~-~~--~~~~~l~~~l 598 (666)
T PLN02654 531 LTGRVDDVINVSGHRIGTAEVESALVSH------PQ--CAEAAVVGIEHEV-KGQGIYAFVTLVE-GV--PYSEELRKSL 598 (666)
T ss_pred EeeeccCeEEeCCEEECHHHHHHHHHhC------CC--eeeEEEEeeEcCC-CCeEEEEEEEECC-CC--CCCHHHHHHH
Confidence 9999999999999999999999999863 12 33444332 221 1113346666542 21 1222222223
Q ss_pred HHHHHhhhCHHHHHhhhccCcc-CCeEEEEeC---CccHHHHHHHHHh---cCCCCCCCccccccCCHhHHHHHhh
Q 007728 507 CLAMEESLDSAYREARVVDKTI-GPLEIRLVK---TGTFEELMDYAIS---RGASINQYKVARCVGSTSILKLLDS 575 (591)
Q Consensus 507 ~~~ld~~Ln~~Y~~~R~~~g~l-~p~~v~~v~---~gtf~~~~~~~~~---~G~~~~Q~K~Pr~~~~~~~~~~l~~ 575 (591)
...+.+.| +.. .|-+|.+|+ ...=.+.++..+. .|. ..+.+.+--+.|++.++.+.+
T Consensus 599 ~~~~~~~L-----------~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 662 (666)
T PLN02654 599 ILTVRNQI-----------GAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ-LDELGDTSTLADPGVVDQLIA 662 (666)
T ss_pred HHHHHHhC-----------CCCcCCCEEEECCCCCCCCCcCchHHHHHHHHcCC-CCCCCCcccccCHHHHHHHHH
Confidence 33332222 222 344566652 1111233333332 342 226777888889999988764
No 17
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=99.47 E-value=4.1e-11 Score=136.99 Aligned_cols=132 Identities=12% Similarity=0.064 Sum_probs=87.9
Q ss_pred CceeeEEEecCh---HHHHHHHHHHhCCCCeecccccccccccccc-CCCCC-----CCCCCceeecCCCeEEEEEECCC
Q 007728 300 TKYLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLN-LNPMC-----KTSEASYTIMPNMAYFEFLLHDP 370 (591)
Q Consensus 300 l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~-~~~~~-----~~~~~~~~l~~~~~~~EFip~~~ 370 (591)
++.++.+.+||. ....+.+++.+ |++++ +.||+||....+. ..+.. ..+..+.. .|+ .-..+++.+.
T Consensus 353 l~~lr~~~~gGe~l~~~~~~~~~~~~-~~~~~-~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p-~~g-~~v~i~d~~~ 428 (628)
T TIGR02316 353 LSSLHWLFLAGEPLDEPTAHWITDGL-GKPVI-DNYWQTETGWPVLAIMPGLDLKPVKLGSPGLP-MYG-YHLRVLDEAT 428 (628)
T ss_pred ccceeEEEEecCCCCHHHHHHHHHHh-CCCEE-ecccccccCceeecCCCCCCcCCCCCCCcccC-cCC-ceEEEEECCC
Confidence 344888888885 34556666777 78888 9999999743221 11100 00111211 122 2233444322
Q ss_pred CCCCCCCCCCCCccccccccCCCceEEEEEccc------ccee-----------------ccccCCEEEEccccCCCCeE
Q 007728 371 GSPASTSDFQPPKLVDLVDVEVGKEYEPIITNY------TGVY-----------------RYKVGDILRVAGFHNASPHF 427 (591)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt~------~Gly-----------------RYr~GDvV~v~gf~~~~P~i 427 (591)
+ .++..|+.|||+|+.- .|+| .|+|||+++++. ...+
T Consensus 429 g----------------~~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~----dG~l 488 (628)
T TIGR02316 429 G----------------RPCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDE----DGYT 488 (628)
T ss_pred C----------------CCCCCCCcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcC----CCcE
Confidence 1 2456799999999752 3333 299999999963 5689
Q ss_pred EEeeecCceecccccccCHHHHHHHHHH
Q 007728 428 HFVRRKDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 428 ~f~gR~~~~l~~~Geki~e~~v~~av~~ 455 (591)
.|+||.+|+|++.|++|.+.+||.+|.+
T Consensus 489 ~i~GR~dd~ik~~G~rv~~~eIE~~l~~ 516 (628)
T TIGR02316 489 FILGRTDDVINVAGHRLGTREIEESVSS 516 (628)
T ss_pred EEEEcCcceEEeCCEEeCHHHHHHHHHh
Confidence 9999999999999999999999999976
No 18
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=99.47 E-value=3.3e-11 Score=137.61 Aligned_cols=132 Identities=11% Similarity=0.109 Sum_probs=88.5
Q ss_pred CceeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccc-cCCCCC-----CCCCCceeecCCCeEEEEEECCC
Q 007728 300 TKYLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGL-NLNPMC-----KTSEASYTIMPNMAYFEFLLHDP 370 (591)
Q Consensus 300 l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i-~~~~~~-----~~~~~~~~l~~~~~~~EFip~~~ 370 (591)
++.|+.+++||. ....+.+++.+ +++++ +.||+||....+ ...+.. .+...+.. .|+ .-+++++.+.
T Consensus 354 l~~lr~i~~~Ge~l~~~~~~~~~~~~-~~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p-~~g-~~~~i~d~~~ 429 (629)
T PRK10524 354 LSSLRALFLAGEPLDEPTASWISEAL-GVPVI-DNYWQTETGWPILAIARGVEDRPTRLGSPGVP-MYG-YNVKLLNEVT 429 (629)
T ss_pred hhheeEEEEeCCCCCHHHHHHHHHhc-CCCeE-eccccccccchhhcCCCCcccCcCCCCCcccC-cCC-ceEEEEeCCC
Confidence 344888889885 34556777777 78998 999999974211 111100 00111111 122 2244554322
Q ss_pred CCCCCCCCCCCCccccccccCCCceEEEEEccc------ccee-----------------ccccCCEEEEccccCCCCeE
Q 007728 371 GSPASTSDFQPPKLVDLVDVEVGKEYEPIITNY------TGVY-----------------RYKVGDILRVAGFHNASPHF 427 (591)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt~------~Gly-----------------RYr~GDvV~v~gf~~~~P~i 427 (591)
. .++.+|+.|||+|+.- .|+| -|+|||+++++ ....+
T Consensus 430 g----------------~~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d----~dG~l 489 (629)
T PRK10524 430 G----------------EPCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRD----ADGYY 489 (629)
T ss_pred C----------------CCCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEc----CCCcE
Confidence 1 1356899999999752 2232 28999999996 36689
Q ss_pred EEeeecCceecccccccCHHHHHHHHHH
Q 007728 428 HFVRRKDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 428 ~f~gR~~~~l~~~Geki~e~~v~~av~~ 455 (591)
.|+||.+|+|++.|++|.+.+||.+|.+
T Consensus 490 ~i~GR~dd~i~~~G~ri~p~eIE~~l~~ 517 (629)
T PRK10524 490 FILGRTDDVINVAGHRLGTREIEESISS 517 (629)
T ss_pred EEEEEecCeEEeCCEEeCHHHHHHHHHh
Confidence 9999999999999999999999999976
No 19
>PRK07788 acyl-CoA synthetase; Validated
Probab=99.46 E-value=7.4e-12 Score=140.39 Aligned_cols=129 Identities=13% Similarity=0.089 Sum_probs=88.5
Q ss_pred eeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCC---CCCCCceeecCCCeEEEEEECCCCCCCC
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMC---KTSEASYTIMPNMAYFEFLLHDPGSPAS 375 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~---~~~~~~~~l~~~~~~~EFip~~~~~~~~ 375 (591)
.++.+++||. ....+.+++.+ +++++ +.||+||+.+.....+.. .+...+. ..++ .-+++++.+ +
T Consensus 324 ~lr~i~~gG~~l~~~~~~~~~~~~-~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~-~~~~-~~~~i~d~~--~--- 394 (549)
T PRK07788 324 SLKIIFVSGSALSPELATRALEAF-GPVLY-NLYGSTEVAFATIATPEDLAEAPGTVGR-PPKG-VTVKILDEN--G--- 394 (549)
T ss_pred ceeEEEEeCCCCCHHHHHHHHHHh-Cccce-eccCcchhchhhccChhhhhhcCCCccc-CCCC-cEEEEECCC--c---
Confidence 3788888884 45667777778 67888 999999974322111110 0111111 1122 234555422 1
Q ss_pred CCCCCCCccccccccCCCceEEEEEcc---ccceec----------cccCCEEEEccccCCCCeEEEeeecCceeccccc
Q 007728 376 TSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR----------YKVGDILRVAGFHNASPHFHFVRRKDALLSIDYD 442 (591)
Q Consensus 376 ~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR----------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~Ge 442 (591)
.++..|+.|||+|++ ..|++. |+|||+++++. ...+.|+||.+|+++++|+
T Consensus 395 ------------~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~dd~i~~~G~ 458 (549)
T PRK07788 395 ------------NEVPRGVVGRIFVGNGFPFEGYTDGRDKQIIDGLLSSGDVGYFDE----DGLLFVDGRDDDMIVSGGE 458 (549)
T ss_pred ------------CCCCCCCeEEEEEeCCCccccccCCCcccccCCceecCceEEEcC----CCCEEEeccCcceEEECCE
Confidence 145679999999986 345542 79999999863 5689999999999999999
Q ss_pred ccCHHHHHHHHHH
Q 007728 443 KTDEADLQKAVEN 455 (591)
Q Consensus 443 ki~e~~v~~av~~ 455 (591)
||++.+||+++.+
T Consensus 459 ~v~p~eIE~~l~~ 471 (549)
T PRK07788 459 NVFPAEVEDLLAG 471 (549)
T ss_pred EECHHHHHHHHHh
Confidence 9999999999976
No 20
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.46 E-value=6.9e-12 Score=141.37 Aligned_cols=131 Identities=15% Similarity=0.211 Sum_probs=90.9
Q ss_pred eeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCCC---CCCCceeecCCCeEEEEEECCCCCCCC
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCK---TSEASYTIMPNMAYFEFLLHDPGSPAS 375 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~---~~~~~~~l~~~~~~~EFip~~~~~~~~ 375 (591)
.++.+++||. ....+.+++.+ +++++ +.||+||+...+...+..+ +...+. ..++ ..+++++.++.+
T Consensus 337 ~lr~i~~gg~~l~~~~~~~~~~~~-~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d~~~~~--- 409 (573)
T PRK05605 337 GVRNAFSGAMALPVSTVELWEKLT-GGLLV-EGYGLTETSPIIVGNPMSDDRRPGYVGV-PFPD-TEVRIVDPEDPD--- 409 (573)
T ss_pred hccEEEECCCcCCHHHHHHHHHHh-CCCee-cccccchhchhhhcCCcccCCcCCcccc-CCCC-CEEEEEcCCCCC---
Confidence 3788888885 35556666767 78888 9999999743221111111 111111 1233 356666644311
Q ss_pred CCCCCCCccccccccCCCceEEEEEcc---cccee-------------ccccCCEEEEccccCCCCeEEEeeecCceecc
Q 007728 376 TSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY-------------RYKVGDILRVAGFHNASPHFHFVRRKDALLSI 439 (591)
Q Consensus 376 ~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 439 (591)
..+..|+.|||+|++ ..|+| .|+|||+++++. ...+.|+||.+|++++
T Consensus 410 ------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~i~gR~dd~i~~ 473 (573)
T PRK05605 410 ------------ETMPDGEEGELLVRGPQVFKGYWNRPEETAKSFLDGWFRTGDVVVMEE----DGFIRIVDRIKELIIT 473 (573)
T ss_pred ------------ccCCCCCeeEEEEecCchhhhhcCChhHhhhcccCCCcccCCEEEEcC----CCcEEEEeccccceee
Confidence 135678999999974 45666 399999999963 5689999999999999
Q ss_pred cccccCHHHHHHHHHH
Q 007728 440 DYDKTDEADLQKAVEN 455 (591)
Q Consensus 440 ~Geki~e~~v~~av~~ 455 (591)
+|+++++.+||++|..
T Consensus 474 ~G~~v~p~eIE~~l~~ 489 (573)
T PRK05605 474 GGFNVYPAEVEEVLRE 489 (573)
T ss_pred CCEEECHHHHHHHHHh
Confidence 9999999999999975
No 21
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=99.46 E-value=5.1e-11 Score=136.86 Aligned_cols=230 Identities=13% Similarity=0.103 Sum_probs=128.7
Q ss_pred CCceeeEEEecCh---HHHHHHHHHHhC-CCCeeccccccccccccccCC-CCCC--CCCCceeecCCCeEEEEEECCCC
Q 007728 299 NTKYLDAVATGSM---AQYIHLLDYYSG-SLPIASMLYSSSECFFGLNLN-PMCK--TSEASYTIMPNMAYFEFLLHDPG 371 (591)
Q Consensus 299 ~l~~l~~~~~g~~---~~y~~~l~~~~~-g~~v~~~~ygaSEg~~~i~~~-~~~~--~~~~~~~l~~~~~~~EFip~~~~ 371 (591)
++..|+++.+||. ....+.+.+.++ ++++. +.||+||....+... +..+ ++..+. ..++ .-+..++ +.
T Consensus 381 ~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~-~~yG~TE~~~~~~~~~~~~~~~~g~~g~-p~~g-~~~~ivd--~~ 455 (655)
T PRK03584 381 DLSALRTIGSTGSPLPPEGFDWVYEHVKADVWLA-SISGGTDICSCFVGGNPLLPVYRGEIQC-RGLG-MAVEAWD--ED 455 (655)
T ss_pred ChhheEEEEEecCCCCHHHHHHHHHHhCCCceEE-eccChHhhhcccccCCCCCCcCCCccCC-CcCC-ceeEEEC--CC
Confidence 4455899999885 344566666663 68888 999999963222111 1001 011111 1122 1223333 22
Q ss_pred CCCCCCCCCCCccccccccCCCceEEEEEcc-----ccceec------------------cccCCEEEEccccCCCCeEE
Q 007728 372 SPASTSDFQPPKLVDLVDVEVGKEYEPIITN-----YTGVYR------------------YKVGDILRVAGFHNASPHFH 428 (591)
Q Consensus 372 ~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt-----~~GlyR------------------Yr~GDvV~v~gf~~~~P~i~ 428 (591)
+ .++ .|+.|||+|+. ..|||. |+|||+++++ ....+.
T Consensus 456 g---------------~~~-~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d----~dG~l~ 515 (655)
T PRK03584 456 G---------------RPV-VGEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEIT----EHGGVV 515 (655)
T ss_pred C---------------CCC-CCCceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEEC----CCCeEE
Confidence 1 133 68899999974 234441 7899999996 356899
Q ss_pred EeeecCceecccccccCHHHHHHHHHHHHHhhcccCceEEeeEeee-cCCCCCceeEEEEEEeecCCCCCCChHHHHHHH
Q 007728 429 FVRRKDALLSIDYDKTDEADLQKAVENASRLLREFDTRILEYTSYA-EKKTNPGHHVIYWEILVKDPANSPTDDVLKQCC 507 (591)
Q Consensus 429 f~gR~~~~l~~~Geki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~-~~~~~p~~Y~l~~E~~~~~~~~~~~~~~~~~~~ 507 (591)
|+||.+|+|+++|++|.+.|||.+|.+. .+ |.+..++. +.......-++|+++.. +. ..+.+..+++.
T Consensus 516 i~GR~dd~Ik~~G~rI~p~EIE~~l~~~------p~--V~ea~vvg~~~~~~g~~~~a~vv~~~-~~--~~~~~~~~~l~ 584 (655)
T PRK03584 516 IYGRSDATLNRGGVRIGTAEIYRQVEAL------PE--VLDSLVIGQEWPDGDVRMPLFVVLAE-GV--TLDDALRARIR 584 (655)
T ss_pred EEeeccCeeecCcEEECHHHHHHHHHhC------CC--cceEEEEeeEcCCCCEEEEEEEEECC-CC--CCcHHHHHHHH
Confidence 9999999999999999999999999763 22 23443332 11112224457777642 21 12222223333
Q ss_pred HHHHhhhCHHHHHhhhccCc-cCCeEEEEeC---CccHHHHHHHHH---hcCCCCCCCccccccCCHhHHHHHhh
Q 007728 508 LAMEESLDSAYREARVVDKT-IGPLEIRLVK---TGTFEELMDYAI---SRGASINQYKVARCVGSTSILKLLDS 575 (591)
Q Consensus 508 ~~ld~~Ln~~Y~~~R~~~g~-l~p~~v~~v~---~gtf~~~~~~~~---~~G~~~~Q~K~Pr~~~~~~~~~~l~~ 575 (591)
+.+.+.| +. ..|-.|.+|+ ...=.+.+++.+ ..|...+|...+.-+.|++.++.+.+
T Consensus 585 ~~~~~~L-----------~~~~~P~~i~~v~~lP~t~sGKi~r~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (655)
T PRK03584 585 TTIRTNL-----------SPRHVPDKIIAVPDIPRTLSGKKVELPVKKLLHGRPVKKAVNRDALANPEALDWFAD 648 (655)
T ss_pred HHHHhhC-----------CCCcCCCEEEECCCCCCCCCccchHHHHHHHHcCCCCCCCCCcccccCHHHHHHHHH
Confidence 3333333 11 2344565553 111122322222 24666666656666789998888754
No 22
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=99.45 E-value=2.5e-11 Score=136.99 Aligned_cols=130 Identities=13% Similarity=0.106 Sum_probs=89.2
Q ss_pred eeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccc-cccCCC--CCCCCCCceeecCCCeEEEEEECCCCCCCC
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFF-GLNLNP--MCKTSEASYTIMPNMAYFEFLLHDPGSPAS 375 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~-~i~~~~--~~~~~~~~~~l~~~~~~~EFip~~~~~~~~ 375 (591)
.++.+++||. ....+.+++.+ |++++ +.||+||... .+...+ ...+...+.. .| +...++++.+.
T Consensus 324 ~lr~~~~gG~~l~~~~~~~~~~~~-g~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~p-~~-g~~~~i~d~~~----- 394 (570)
T PRK04319 324 SLRHILSVGEPLNPEVVRWGMKVF-GLPIH-DNWWMTETGGIMIANYPAMDIKPGSMGKP-LP-GIEAAIVDDQG----- 394 (570)
T ss_pred cceEEEEcccCCCHHHHHHHHHHh-CCCeE-eceeecccCCEEEecCCCCCCCCCcCcCC-CC-CCEEEEECCCC-----
Confidence 3788888884 34556677777 78998 9999999742 221111 1111112221 12 23455554332
Q ss_pred CCCCCCCccccccccCCCceEEEEEcc-----cccee-------------ccccCCEEEEccccCCCCeEEEeeecCcee
Q 007728 376 TSDFQPPKLVDLVDVEVGKEYEPIITN-----YTGVY-------------RYKVGDILRVAGFHNASPHFHFVRRKDALL 437 (591)
Q Consensus 376 ~~~~~~~~~~~~~ev~~G~~yelvvTt-----~~Gly-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l 437 (591)
.++.+|+.|||+|+. ..||| -|+|||+++++ ....+.|+||.+|++
T Consensus 395 ------------~~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~~gw~~TGDl~~~~----~~g~l~~~GR~~d~i 458 (570)
T PRK04319 395 ------------NELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYFAGDWYVSGDSAYMD----EDGYFWFQGRVDDVI 458 (570)
T ss_pred ------------CCCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhhcCCceEeCcEEEEC----CCeeEEEEecCCCEE
Confidence 134789999999964 23565 28999999996 366899999999999
Q ss_pred cccccccCHHHHHHHHHHH
Q 007728 438 SIDYDKTDEADLQKAVENA 456 (591)
Q Consensus 438 ~~~Geki~e~~v~~av~~a 456 (591)
+++|++|++.+||+++.+.
T Consensus 459 ~~~G~~i~p~eIE~~l~~~ 477 (570)
T PRK04319 459 KTSGERVGPFEVESKLMEH 477 (570)
T ss_pred EECCEEECHHHHHHHHhhC
Confidence 9999999999999999763
No 23
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.44 E-value=2.7e-11 Score=133.93 Aligned_cols=128 Identities=16% Similarity=0.154 Sum_probs=86.8
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccc-cccCCCCC-------CCCCCceeecCCCeEEEEEECCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFF-GLNLNPMC-------KTSEASYTIMPNMAYFEFLLHDPG 371 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~-~i~~~~~~-------~~~~~~~~l~~~~~~~EFip~~~~ 371 (591)
++.+..||. ...++.+++.+ +++++ +.||+||... +....... .....+. ..+ ...+++++++..
T Consensus 283 l~~v~~~Ge~l~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~-~~~-~~~~~i~~~~~~ 358 (521)
T PRK06187 283 LRLVIYGGAALPPALLREFKEKF-GIDLV-QGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGR-PLP-GVEARIVDDDGD 358 (521)
T ss_pred hhEEEEcCcCCCHHHHHHHHHHh-Ccchh-eeeccCccCcccccCCcccccccccccCCcccc-ccC-CeEEEEECCCCC
Confidence 667777774 45667788888 89999 9999999632 22111100 0001111 112 234555553321
Q ss_pred CCCCCCCCCCCccccccccCC--CceEEEEEcc---cccee-c------------cccCCEEEEccccCCCCeEEEeeec
Q 007728 372 SPASTSDFQPPKLVDLVDVEV--GKEYEPIITN---YTGVY-R------------YKVGDILRVAGFHNASPHFHFVRRK 433 (591)
Q Consensus 372 ~~~~~~~~~~~~~~~~~ev~~--G~~yelvvTt---~~Gly-R------------Yr~GDvV~v~gf~~~~P~i~f~gR~ 433 (591)
++.. |+.|||+|++ ..|++ + |+|||++++.. ...+.+.||.
T Consensus 359 -----------------~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~~~~tGD~~~~~~----~g~~~~~GR~ 417 (521)
T PRK06187 359 -----------------ELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETIDGGWLHTGDVGYIDE----DGYLYITDRI 417 (521)
T ss_pred -----------------CCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHhhCCceeccceEEEcC----CCCEEEeecc
Confidence 3345 9999999986 34544 3 99999999964 5678999999
Q ss_pred CceecccccccCHHHHHHHHHH
Q 007728 434 DALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 434 ~~~l~~~Geki~e~~v~~av~~ 455 (591)
+++++++|+++.+.+||+++..
T Consensus 418 ~~~i~~~G~~v~~~~IE~~l~~ 439 (521)
T PRK06187 418 KDVIISGGENIYPRELEDALYG 439 (521)
T ss_pred cceEEcCCeEECHHHHHHHHHh
Confidence 9999999999999999998865
No 24
>PLN02574 4-coumarate--CoA ligase-like
Probab=99.44 E-value=2.7e-11 Score=136.39 Aligned_cols=133 Identities=16% Similarity=0.115 Sum_probs=92.2
Q ss_pred eeeEEEecCh---HHHHHHHHHHhCCCCeecccccccccccccc--CCCCCCCCCCceeecCCCeEEEEEECCCCCCCCC
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLN--LNPMCKTSEASYTIMPNMAYFEFLLHDPGSPAST 376 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~--~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~ 376 (591)
.++.+.+||. ...++++.+.+++++++ +.||+||+..... ...................-.+.+++++.
T Consensus 320 ~lr~~~~gg~~l~~~~~~~~~~~~~~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g----- 393 (560)
T PLN02574 320 SLKQVSCGAAPLSGKFIQDFVQTLPHVDFI-QGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTG----- 393 (560)
T ss_pred cceEEEEecccCCHHHHHHHHHHCCCCcEE-ecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCC-----
Confidence 3677888874 45567777778789999 9999999743211 11111000112222223345666654432
Q ss_pred CCCCCCccccccccCCCceEEEEEcc---ccceec--------------cccCCEEEEccccCCCCeEEEeeecCceecc
Q 007728 377 SDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR--------------YKVGDILRVAGFHNASPHFHFVRRKDALLSI 439 (591)
Q Consensus 377 ~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 439 (591)
.++.+|+.|||+|+. ..|||. |+|||+++++. ...+.|+||.+|++++
T Consensus 394 -----------~~~~~g~~Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~----~G~l~i~GR~~d~i~~ 458 (560)
T PLN02574 394 -----------CLLPPGNCGELWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDE----DGYLYIVDRLKEIIKY 458 (560)
T ss_pred -----------cCCCCCCCeEEEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEEC----CCeEEEEecchhheEE
Confidence 245789999999974 445552 99999999963 6789999999999999
Q ss_pred cccccCHHHHHHHHHH
Q 007728 440 DYDKTDEADLQKAVEN 455 (591)
Q Consensus 440 ~Geki~e~~v~~av~~ 455 (591)
.|++++..+||.+|..
T Consensus 459 ~G~~v~~~eiE~~l~~ 474 (560)
T PLN02574 459 KGFQIAPADLEAVLIS 474 (560)
T ss_pred CCEEECHHHHHHHHHh
Confidence 9999999999999975
No 25
>PRK09274 peptide synthase; Provisional
Probab=99.43 E-value=2.2e-11 Score=136.60 Aligned_cols=139 Identities=11% Similarity=0.084 Sum_probs=90.1
Q ss_pred eeEEEecCh---HHHHHHHHHHhC-CCCeeccccccccccccccCCCCC---------CC--C-CCceeecCCCeEEEEE
Q 007728 303 LDAVATGSM---AQYIHLLDYYSG-SLPIASMLYSSSECFFGLNLNPMC---------KT--S-EASYTIMPNMAYFEFL 366 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~-g~~v~~~~ygaSEg~~~i~~~~~~---------~~--~-~~~~~l~~~~~~~EFi 366 (591)
++.+++||. ...++.+++.++ |++++ +.||+||+.......... .. . ..+. ..|+ .-+.++
T Consensus 290 lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~-~~~~-~~~~iv 366 (552)
T PRK09274 290 LRRVISAGAPVPIAVIERFRAMLPPDAEIL-TPYGATEALPISSIESREILFATRAATDNGAGICVGR-PVDG-VEVRII 366 (552)
T ss_pred hhEEEecCCcCCHHHHHHHHHHcCCCceEE-ccccccccceeEeecchhhhccccccccCCCCcccCc-cCCC-ceEEEE
Confidence 778888885 466778888886 48998 999999974321111100 00 0 0111 1222 234455
Q ss_pred ECCCCCCCCCCCCCCCccccccccCCCceEEEEEcc---ccce------------------eccccCCEEEEccccCCCC
Q 007728 367 LHDPGSPASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGV------------------YRYKVGDILRVAGFHNASP 425 (591)
Q Consensus 367 p~~~~~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gl------------------yRYr~GDvV~v~gf~~~~P 425 (591)
+.++.. .+.--...++..|+.|||+|.. ..|| ..|+|||+++++. ..
T Consensus 367 d~~~~~--------~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~----dG 434 (552)
T PRK09274 367 AISDAP--------IPEWDDALRLATGEIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDA----QG 434 (552)
T ss_pred eccccc--------cccccccccCCCCCeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEcc----CC
Confidence 432210 0000012356789999999953 2232 3799999999963 56
Q ss_pred eEEEeeecCceecccccccCHHHHHHHHHHH
Q 007728 426 HFHFVRRKDALLSIDYDKTDEADLQKAVENA 456 (591)
Q Consensus 426 ~i~f~gR~~~~l~~~Geki~e~~v~~av~~a 456 (591)
.+.|+||.+|+++++|+++++.+||.+|.+.
T Consensus 435 ~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~ 465 (552)
T PRK09274 435 RLWFCGRKAHRVETAGGTLYTIPCERIFNTH 465 (552)
T ss_pred cEEEEeccCCeEEECCEEECcHHHHHHHHhC
Confidence 8999999999999999999999999999863
No 26
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=99.43 E-value=5.5e-12 Score=141.47 Aligned_cols=128 Identities=9% Similarity=0.088 Sum_probs=89.1
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCCCC----CCCceeecCCCeEEEEEECCCCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCKT----SEASYTIMPNMAYFEFLLHDPGSPAS 375 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~----~~~~~~l~~~~~~~EFip~~~~~~~~ 375 (591)
++++++||. ...++.+++.+ +++++ +.||+||+.......+.... ...+.. .+ ..-+++++.+ +
T Consensus 314 l~~~~~~G~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~-~~-~~~v~i~d~~--~--- 384 (547)
T PRK13295 314 LRTFLCAGAPIPGALVERARAAL-GAKIV-SAWGMTENGAVTLTKLDDPDERASTTDGCP-LP-GVEVRVVDAD--G--- 384 (547)
T ss_pred ceEEEEecCCCCHHHHHHHHHHh-CCCeE-EeccCCCCCCeeeccCCCcchhccCccccc-cC-CcEEEEECCC--C---
Confidence 788888874 46667788878 89999 99999997432111111000 011111 12 2234444422 1
Q ss_pred CCCCCCCccccccccCCCceEEEEEcc---ccceec------------cccCCEEEEccccCCCCeEEEeeecCceeccc
Q 007728 376 TSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR------------YKVGDILRVAGFHNASPHFHFVRRKDALLSID 440 (591)
Q Consensus 376 ~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~ 440 (591)
.++..|+.+||+|+. ..|+|. |+|||+++++ ..+.+.|.||.+++++++
T Consensus 385 ------------~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~g~~~TGD~~~~~----~~g~l~~~gR~~~~i~~~ 448 (547)
T PRK13295 385 ------------APLPAGQIGRLQVRGCSNFGGYLKRPQLNGTDADGWFDTGDLARID----ADGYIRISGRSKDVIIRG 448 (547)
T ss_pred ------------CCCCCCCCCeEEEEcCcccccccCCccccccCCCCCeecceEEEEc----CCceEEEEeccCCeEEEC
Confidence 245679999999975 566652 9999999996 367899999999999999
Q ss_pred ccccCHHHHHHHHHH
Q 007728 441 YDKTDEADLQKAVEN 455 (591)
Q Consensus 441 Geki~e~~v~~av~~ 455 (591)
|+|+.+.+|+.+|.+
T Consensus 449 G~~v~p~~IE~~l~~ 463 (547)
T PRK13295 449 GENIPVVEIEALLYR 463 (547)
T ss_pred CEEECHHHHHHHHHh
Confidence 999999999999976
No 27
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=99.42 E-value=6.7e-12 Score=140.81 Aligned_cols=128 Identities=13% Similarity=0.132 Sum_probs=88.4
Q ss_pred eeEEEecCh-HHHHHHHHHHhCCCCeeccccccccccccccCC-CCCCCCCCceeecCCCeEEEEEECCCCCCCCCCCCC
Q 007728 303 LDAVATGSM-AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLN-PMCKTSEASYTIMPNMAYFEFLLHDPGSPASTSDFQ 380 (591)
Q Consensus 303 l~~~~~g~~-~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~-~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~ 380 (591)
++.+.+|+. ...++.+++.+ |++++ +.||+||+...+... +...+...+. .....-.++++.+ +
T Consensus 296 l~~~~~g~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~vG~--~~~~~~~~i~d~~--~-------- 361 (542)
T PRK06155 296 VRVALGPGVPAALHAAFRERF-GVDLL-DGYGSTETNFVIAVTHGSQRPGSMGR--LAPGFEARVVDEH--D-------- 361 (542)
T ss_pred eEEEEEcCCCHHHHHHHHHHc-CCCEE-eeecccccCccccCCCCCCCCCCcCc--cCCCceEEEECCC--C--------
Confidence 566667765 34556777777 79999 999999974322111 1111111111 1223345555422 1
Q ss_pred CCccccccccCCCceEEEEEccc------ccee-------------ccccCCEEEEccccCCCCeEEEeeecCceecccc
Q 007728 381 PPKLVDLVDVEVGKEYEPIITNY------TGVY-------------RYKVGDILRVAGFHNASPHFHFVRRKDALLSIDY 441 (591)
Q Consensus 381 ~~~~~~~~ev~~G~~yelvvTt~------~Gly-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~G 441 (591)
.++..|+.|||+|+.. .|+| +|+|||+++++ ....+.|+||.+|+++++|
T Consensus 362 -------~~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~~~~~~~TGD~~~~~----~dG~l~i~GR~~d~i~~~G 430 (542)
T PRK06155 362 -------QELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAWRNLWFHTGDRVVRD----ADGWFRFVDRIKDAIRRRG 430 (542)
T ss_pred -------CCCCCCCceEEEEecCCccccchhhcCCHHHHHHhhcCCcEeccceEEEc----CCceEEEEecCCCEEEeCC
Confidence 2456799999999763 3444 59999999996 3568999999999999999
Q ss_pred cccCHHHHHHHHHH
Q 007728 442 DKTDEADLQKAVEN 455 (591)
Q Consensus 442 eki~e~~v~~av~~ 455 (591)
+++++.+||++|.+
T Consensus 431 ~~v~p~eIE~~l~~ 444 (542)
T PRK06155 431 ENISSFEVEQVLLS 444 (542)
T ss_pred EEECHHHHHHHHHh
Confidence 99999999999976
No 28
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.42 E-value=2e-11 Score=137.39 Aligned_cols=129 Identities=16% Similarity=0.197 Sum_probs=90.1
Q ss_pred eeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCC--CCCCCceeecCCCeEEEEEECCCCCCCCC
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMC--KTSEASYTIMPNMAYFEFLLHDPGSPAST 376 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~--~~~~~~~~l~~~~~~~EFip~~~~~~~~~ 376 (591)
.++.++.||. ....+.+++.+ |++++ +.||+||+...+...+.. .+...+.. . .....+.++++ +
T Consensus 327 ~lr~v~~gG~~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~vG~~-~-~~~~v~i~d~~--~---- 396 (562)
T PRK05677 327 ALKLTLSGGMALQLATAERWKEVT-GCAIC-EGYGMTETSPVVSVNPSQAIQVGTIGIP-V-PSTLCKVIDDD--G---- 396 (562)
T ss_pred hceEEEEcCccCCHHHHHHHHHHc-CCCee-ccCCccccCcceeecCccCCCCCccCcc-C-CCCEEEEECCC--C----
Confidence 3788888885 45556677777 79999 999999974322221111 11112221 1 23345555432 1
Q ss_pred CCCCCCccccccccCCCceEEEEEcc---ccceec--------------cccCCEEEEccccCCCCeEEEeeecCceecc
Q 007728 377 SDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR--------------YKVGDILRVAGFHNASPHFHFVRRKDALLSI 439 (591)
Q Consensus 377 ~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 439 (591)
.+|..|+.|||+|+. ..|||. |+|||+++++. ...+.|.||.+|++++
T Consensus 397 -----------~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~----~G~l~i~GR~~d~i~~ 461 (562)
T PRK05677 397 -----------NELPLGEVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQE----DGYMRIVDRKKDMILV 461 (562)
T ss_pred -----------CCCCCCCCeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECC----CCcEEEEecCcCeEEe
Confidence 245689999999964 445552 99999999974 5689999999999999
Q ss_pred cccccCHHHHHHHHHH
Q 007728 440 DYDKTDEADLQKAVEN 455 (591)
Q Consensus 440 ~Geki~e~~v~~av~~ 455 (591)
.|++|++.+||++|..
T Consensus 462 ~G~~i~p~eiE~~l~~ 477 (562)
T PRK05677 462 SGFNVYPNELEDVLAA 477 (562)
T ss_pred CCEEECHHHHHHHHHh
Confidence 9999999999999976
No 29
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.42 E-value=3.4e-11 Score=133.07 Aligned_cols=130 Identities=16% Similarity=0.162 Sum_probs=87.8
Q ss_pred ceeeEEEecCh---HHHHHHHHHHhCCC-CeeccccccccccccccCCCCCC-----CCCCceeecCCCeEEEEEECCCC
Q 007728 301 KYLDAVATGSM---AQYIHLLDYYSGSL-PIASMLYSSSECFFGLNLNPMCK-----TSEASYTIMPNMAYFEFLLHDPG 371 (591)
Q Consensus 301 ~~l~~~~~g~~---~~y~~~l~~~~~g~-~v~~~~ygaSEg~~~i~~~~~~~-----~~~~~~~l~~~~~~~EFip~~~~ 371 (591)
..++.+++||. ...++.+++.+ ++ +++ +.||+||+...+....... +...+ ... .+.-+++++++
T Consensus 281 ~~l~~v~~~g~~~~~~~~~~~~~~~-~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG-~~~-~~~~~~i~d~~-- 354 (513)
T PRK07656 281 SSLRLAVTGAASMPVALLERFESEL-GVDIVL-TGYGLSEASGVTTFNRLDDDRKTVAGTIG-TAI-AGVENKIVNEL-- 354 (513)
T ss_pred cceeeEEecCCCCCHHHHHHHHHHc-CCCceE-eEEccccCCCceeecCccccccccCCCcc-ccC-CCcEEEEECCC--
Confidence 34788888884 45567777778 56 888 9999999832211111100 00111 111 22344555422
Q ss_pred CCCCCCCCCCCccccccccCCCceEEEEEcc---cccee----------c----cccCCEEEEccccCCCCeEEEeeecC
Q 007728 372 SPASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY----------R----YKVGDILRVAGFHNASPHFHFVRRKD 434 (591)
Q Consensus 372 ~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly----------R----Yr~GDvV~v~gf~~~~P~i~f~gR~~ 434 (591)
+ ..+..|+.|||+|+. ..|+| + |+|||+++.+. ...+.++||.+
T Consensus 355 ~---------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~~----~g~~~~~GR~~ 415 (513)
T PRK07656 355 G---------------EEVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADGWLHTGDLGRLDE----EGYLYIVDRKK 415 (513)
T ss_pred C---------------CCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCCceeccceEEEcC----CeeEEEEeccc
Confidence 1 245789999999975 33444 2 89999999963 56899999999
Q ss_pred ceecccccccCHHHHHHHHHH
Q 007728 435 ALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 435 ~~l~~~Geki~e~~v~~av~~ 455 (591)
|++++.|++++..+||++|..
T Consensus 416 d~i~~~G~~v~~~~iE~~l~~ 436 (513)
T PRK07656 416 DMFIVGGFNVYPAEVEEVLYE 436 (513)
T ss_pred ceEEeCCEEeCHHHHHHHHHh
Confidence 999999999999999999965
No 30
>PRK07514 malonyl-CoA synthase; Validated
Probab=99.42 E-value=3.7e-11 Score=132.80 Aligned_cols=129 Identities=12% Similarity=0.148 Sum_probs=90.1
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCC--CCCCCCCCceeecCCCeEEEEEECCCCCCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLN--PMCKTSEASYTIMPNMAYFEFLLHDPGSPASTS 377 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~--~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~ 377 (591)
++.+++||. ....+.+++.+ +++++ +.||+||+.+..... ..+.+...+ .........+++++..
T Consensus 271 lr~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~G--~~~~~~~v~i~d~~~~------ 340 (504)
T PRK07514 271 MRLFISGSAPLLAETHREFQERT-GHAIL-ERYGMTETNMNTSNPYDGERRAGTVG--FPLPGVSLRVTDPETG------ 340 (504)
T ss_pred eeeEEecCCCCCHHHHHHHHHHh-CCcce-eecccccccccccCCccccccCcccc--cCCCCcEEEEEECCCC------
Confidence 788888885 34556677777 68888 999999974432111 111111111 1112345556653322
Q ss_pred CCCCCccccccccCCCceEEEEEcc---ccceec--------------cccCCEEEEccccCCCCeEEEeeecCceeccc
Q 007728 378 DFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR--------------YKVGDILRVAGFHNASPHFHFVRRKDALLSID 440 (591)
Q Consensus 378 ~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~ 440 (591)
..+..|+.+||+|++ ..|+|+ |+|||+++.+. ...+.|.||.++++++.
T Consensus 341 ----------~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~~~~~GR~~~~i~~~ 406 (504)
T PRK07514 341 ----------AELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDE----RGYVHIVGRGKDLIISG 406 (504)
T ss_pred ----------CCCCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcC----CccEEEeccccceEEeC
Confidence 145679999999975 566764 99999999974 56789999999999999
Q ss_pred ccccCHHHHHHHHHH
Q 007728 441 YDKTDEADLQKAVEN 455 (591)
Q Consensus 441 Geki~e~~v~~av~~ 455 (591)
|+++++.+||.+|.+
T Consensus 407 G~~i~~~~IE~~l~~ 421 (504)
T PRK07514 407 GYNVYPKEVEGEIDE 421 (504)
T ss_pred CeEECHHHHHHHHHh
Confidence 999999999999976
No 31
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=99.41 E-value=6.3e-11 Score=131.22 Aligned_cols=131 Identities=13% Similarity=0.182 Sum_probs=94.0
Q ss_pred CCceeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCC--CCCCCceeecCCCeEEEEEECCCCCC
Q 007728 299 NTKYLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMC--KTSEASYTIMPNMAYFEFLLHDPGSP 373 (591)
Q Consensus 299 ~l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~--~~~~~~~~l~~~~~~~EFip~~~~~~ 373 (591)
.|++|+.+.+.|. .+-.+.+.+.+ |++|. +.||.||...++ +.+.. .+...+.. .|. .-.+.++.+ +
T Consensus 288 dlssLr~~~SaGEPLnpe~~~w~~~~~-g~~i~-d~~gqTEtg~~~-~~~~~~~~~g~~g~p-~pG-~~~~vvdd~-g-- 359 (528)
T COG0365 288 DLSSLRVLGSAGEPLNPEAFEWFYSAL-GVWIL-DIYGQTETGMGF-IAGRPPVKNGSSGLP-LPG-YAVRRVDDE-G-- 359 (528)
T ss_pred cchhheeeeccCCCCCHHHHHHHHHHh-CCCEe-ccccccccCccc-cCCCCCcCCCCCCCC-CCC-ceeEEECCC-C--
Confidence 4556899999885 45556677778 69999 999999975221 11211 11122222 232 345666644 2
Q ss_pred CCCCCCCCCccccccccCCCceEEEEEcc-----ccceec-------------cccCCEEEEccccCCCCeEEEeeecCc
Q 007728 374 ASTSDFQPPKLVDLVDVEVGKEYEPIITN-----YTGVYR-------------YKVGDILRVAGFHNASPHFHFVRRKDA 435 (591)
Q Consensus 374 ~~~~~~~~~~~~~~~ev~~G~~yelvvTt-----~~GlyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~ 435 (591)
.++.+|+ |+|+|.. ..|+|+ |.|||.+..+ ....|.|+||.||
T Consensus 360 --------------~~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~~y~tGD~~~~D----edGy~~i~GR~DD 420 (528)
T COG0365 360 --------------NPVPPGV-GELVVRLPWPGMALTYWNDPERYKEAYFGRWYRTGDWAERD----EDGYFWLHGRSDD 420 (528)
T ss_pred --------------CcCCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhhceeecCceeEEc----cCCCEEEEeeccc
Confidence 1456788 9999974 345776 9999999997 4689999999999
Q ss_pred eecccccccCHHHHHHHHHHH
Q 007728 436 LLSIDYDKTDEADLQKAVENA 456 (591)
Q Consensus 436 ~l~~~Geki~e~~v~~av~~a 456 (591)
+||+.|..|...|||++|.+.
T Consensus 421 vI~vsG~Rig~~EvE~~l~~h 441 (528)
T COG0365 421 VIKVSGKRIGPLEIESVLLAH 441 (528)
T ss_pred eEeccCeeccHHHHHHHHHhC
Confidence 999999999999999999873
No 32
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=99.41 E-value=7.5e-11 Score=130.27 Aligned_cols=129 Identities=12% Similarity=0.141 Sum_probs=84.7
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCC-CC------CCCCCceeecCCCeEEEEEECCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNP-MC------KTSEASYTIMPNMAYFEFLLHDPGS 372 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~-~~------~~~~~~~~l~~~~~~~EFip~~~~~ 372 (591)
++.+++||. ....+.+.+.+++++++ ..||+||+...+.... .+ .....+.. .++ .-...++.+ +
T Consensus 260 l~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~-~~~-~~~~i~~~~--~ 334 (502)
T TIGR01734 260 LTHFLFCGEELPVKTAKALLERFPKATIY-NTYGPTEATVAVTSVKITQEILDQYPRLPIGFA-KPD-MNLFIMDEE--G 334 (502)
T ss_pred ccEEEEcCCcCCHHHHHHHHHHCCCcEEE-eCccCCcceEEEEEEEccccccccCCccccccc-cCC-CEEEEECCC--C
Confidence 566666663 45667777778889998 9999999643221110 00 00001111 111 112222211 1
Q ss_pred CCCCCCCCCCccccccccCCCceEEEEEcc---cccee-----------------ccccCCEEEEccccCCCCeEEEeee
Q 007728 373 PASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY-----------------RYKVGDILRVAGFHNASPHFHFVRR 432 (591)
Q Consensus 373 ~~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly-----------------RYr~GDvV~v~gf~~~~P~i~f~gR 432 (591)
..+.+|+.|||+|+. ..|+| -|+|||+++++. . .+.|+||
T Consensus 335 ---------------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~----~-~l~i~GR 394 (502)
T TIGR01734 335 ---------------EPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITD----G-QLFYQGR 394 (502)
T ss_pred ---------------CCCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEEC----C-EEEEecc
Confidence 135679999999964 34444 389999999973 3 9999999
Q ss_pred cCceecccccccCHHHHHHHHHHH
Q 007728 433 KDALLSIDYDKTDEADLQKAVENA 456 (591)
Q Consensus 433 ~~~~l~~~Geki~e~~v~~av~~a 456 (591)
.+|+++++|+|+++.+||+++.+.
T Consensus 395 ~~d~i~~~G~~v~~~~IE~~l~~~ 418 (502)
T TIGR01734 395 LDFQIKLHGYRIELEDIEFNLRQS 418 (502)
T ss_pred ccCeEEECcEEeCHHHHHHHHHcC
Confidence 999999999999999999999873
No 33
>PRK09088 acyl-CoA synthetase; Validated
Probab=99.40 E-value=2.4e-11 Score=133.95 Aligned_cols=131 Identities=18% Similarity=0.240 Sum_probs=86.0
Q ss_pred ceeeEEEecChH---HHHHHHHHHhCCCCeeccccccccccccccCCCCCC---CCCCceeecCCCeEEEEEECCCCCCC
Q 007728 301 KYLDAVATGSMA---QYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCK---TSEASYTIMPNMAYFEFLLHDPGSPA 374 (591)
Q Consensus 301 ~~l~~~~~g~~~---~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~---~~~~~~~l~~~~~~~EFip~~~~~~~ 374 (591)
..++.+++||.. ...+.+.+ . |++++ +.||+||+...+.....|. ...............++++.+ +
T Consensus 252 ~~l~~~~~gG~~~~~~~~~~~~~-~-g~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~--~-- 324 (488)
T PRK09088 252 RHLTALFTGGAPHAAEDILGWLD-D-GIPMV-DGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVVDDQ--G-- 324 (488)
T ss_pred ccceEEEecCCCCCHHHHHHHHH-h-CCcee-eeecccccccccccCCCcccccccCCccccCCCCcEEEEECCC--C--
Confidence 347888898863 22233332 2 79999 8999999743211111110 001111111233345555422 1
Q ss_pred CCCCCCCCccccccccCCCceEEEEEcc---ccceec--------------cccCCEEEEccccCCCCeEEEeeecCcee
Q 007728 375 STSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR--------------YKVGDILRVAGFHNASPHFHFVRRKDALL 437 (591)
Q Consensus 375 ~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l 437 (591)
.++..|+.|||+|++ ..|||+ |+|||+++++. ...+.|.||.+|++
T Consensus 325 -------------~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~~d~i 387 (488)
T PRK09088 325 -------------NDCPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDA----DGFFWVVDRKKDMF 387 (488)
T ss_pred -------------CCCcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcC----CCcEEEeccccceE
Confidence 135678999999975 456653 99999999963 56899999999999
Q ss_pred cccccccCHHHHHHHHHH
Q 007728 438 SIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 438 ~~~Geki~e~~v~~av~~ 455 (591)
+++|+|+++.+||++|..
T Consensus 388 ~~~G~~i~~~~iE~~l~~ 405 (488)
T PRK09088 388 ISGGENVYPAEIEAVLAD 405 (488)
T ss_pred EeCCEEECHHHHHHHHHh
Confidence 999999999999999965
No 34
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=99.40 E-value=6.9e-11 Score=132.34 Aligned_cols=131 Identities=16% Similarity=0.190 Sum_probs=89.4
Q ss_pred eeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCC-CCC--CCCCCceeecCCCeEEEEEECCCCCCCC
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLN-PMC--KTSEASYTIMPNMAYFEFLLHDPGSPAS 375 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~-~~~--~~~~~~~~l~~~~~~~EFip~~~~~~~~ 375 (591)
.+++++.||. ....+.+++.+ +++++ +.||+||+...+... ... .+...+..+ +. ..++.+..++.+
T Consensus 313 ~l~~i~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~-~~-~~~~v~~~d~~~--- 385 (541)
T TIGR03205 313 SLATIGSGGAPLPVEVANFFERKT-GLKLK-SGWGMTETCSPGTGHPPEGPDKPGSIGLML-PG-IELDVVSLDDPT--- 385 (541)
T ss_pred ccceEEEccccCCHHHHHHHHHHh-CCCee-cccccccCCcccccCCCCCCCCCCCcceec-cC-ceeEEEecCCCC---
Confidence 3788888885 34556677777 78998 999999974321111 110 111223332 22 233444433321
Q ss_pred CCCCCCCccccccccCCCceEEEEEcc---cccee-------------ccccCCEEEEccccCCCCeEEEeeecCceecc
Q 007728 376 TSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY-------------RYKVGDILRVAGFHNASPHFHFVRRKDALLSI 439 (591)
Q Consensus 376 ~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 439 (591)
.++.+|+.|||+|++ ..|+| +|+|||++++.. ...+.|+||.++++++
T Consensus 386 ------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~i~GR~~~~i~~ 449 (541)
T TIGR03205 386 ------------KVLPPGEVGELRIRGPNVTRGYWNRPEESAEAFVGDRFLTGDIGYMDT----DGYFFLVDRKKDMIIS 449 (541)
T ss_pred ------------ccCCCCCeeEEEEecCCccccccCChhhhHhhhccCCcccCceEEEcC----CceEEEEccccCeEEE
Confidence 245679999999985 44555 589999999963 5688999999999999
Q ss_pred cccccCHHHHHHHHHH
Q 007728 440 DYDKTDEADLQKAVEN 455 (591)
Q Consensus 440 ~Geki~e~~v~~av~~ 455 (591)
+|+++++.+||.++.+
T Consensus 450 ~G~~i~~~eIE~~l~~ 465 (541)
T TIGR03205 450 GGFNVYPQMIEQAIYE 465 (541)
T ss_pred CCEEECHHHHHHHHHh
Confidence 9999999999999976
No 35
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=99.40 E-value=1.1e-11 Score=139.57 Aligned_cols=144 Identities=9% Similarity=0.103 Sum_probs=86.8
Q ss_pred eeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCCCCCCCceeecCCCeEEEEEECCCC------C
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCKTSEASYTIMPNMAYFEFLLHDPG------S 372 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~------~ 372 (591)
.++.+++||. ....+++++.+++++++ +.||+||+...+......++.... .......+...... .
T Consensus 289 ~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 363 (563)
T PLN02860 289 SVRKILNGGGSLSSRLLPDAKKLFPNAKLF-SAYGMTEACSSLTFMTLHDPTLES----PKQTLQTVNQTKSSSVHQPQG 363 (563)
T ss_pred ceeEEEeCCCcCCHHHHHHHHHhcCCCcee-cCCCccccCccccccccccccccc----chhhhhhhcccccccccccCC
Confidence 3788888885 45667788888889999 999999974322111110100000 00000001000000 0
Q ss_pred CCCCCCCCCCccccccccCCCceEEEEEcc---ccceec--------------cccCCEEEEccccCCCCeEEEeeecCc
Q 007728 373 PASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR--------------YKVGDILRVAGFHNASPHFHFVRRKDA 435 (591)
Q Consensus 373 ~~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~ 435 (591)
..-..+ ...-.+.+...++|+.|||+|.. ..|||. |+|||++++. ....+.|+||.+|
T Consensus 364 ~~vG~p-~~~~~v~i~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d----~dG~l~~~GR~~d 438 (563)
T PLN02860 364 VCVGKP-APHVELKIGLDESSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWID----KAGNLWLIGRSND 438 (563)
T ss_pred cccCCc-cCCcEEEEecCCCCceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEc----CCCCEEEeecccc
Confidence 000000 00001112122368999999964 456652 8999999996 3678999999999
Q ss_pred eecccccccCHHHHHHHHHH
Q 007728 436 LLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 436 ~l~~~Geki~e~~v~~av~~ 455 (591)
+++++|+++++.+||+++.+
T Consensus 439 ~i~~~G~~v~p~eIE~~l~~ 458 (563)
T PLN02860 439 RIKTGGENVYPEEVEAVLSQ 458 (563)
T ss_pred eeEECCEEccHHHHHHHHHh
Confidence 99999999999999999976
No 36
>PLN03051 acyl-activating enzyme; Provisional
Probab=99.39 E-value=9.7e-11 Score=130.15 Aligned_cols=130 Identities=16% Similarity=0.141 Sum_probs=80.6
Q ss_pred eeeEEEecCh---HHHHHHHHHHhC-CCCeeccccccccccccccC-CCCCC--CCCCceeecCCCeEEEEEECCCCCCC
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSG-SLPIASMLYSSSECFFGLNL-NPMCK--TSEASYTIMPNMAYFEFLLHDPGSPA 374 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~-g~~v~~~~ygaSEg~~~i~~-~~~~~--~~~~~~~l~~~~~~~EFip~~~~~~~ 374 (591)
.++.+++||. ....+.+++..+ +++++ +.||+||+..++.. .+..+ +...+.. .++ .|..-+++.+
T Consensus 237 ~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~p-~~~---~~~~ivd~~g-- 309 (499)
T PLN03051 237 KLRVFASTGEASAVDDVLWLSSVRGYYKPVI-EYCGGTELASGYISSTLLQPQAPGAFSTA-SLG---TRFVLLNDNG-- 309 (499)
T ss_pred hheEEEecCCCCCHHHHHHHHHhccccceeE-eeeccccccceeecccccCCCCCccccCC-CCC---ceEEEECCCC--
Confidence 3788888874 233344445332 47887 99999996422111 11100 1111111 122 2322223221
Q ss_pred CCCCCCCCccccccccCCC--ceEEEEEccc-----ccee---------------------ccccCCEEEEccccCCCCe
Q 007728 375 STSDFQPPKLVDLVDVEVG--KEYEPIITNY-----TGVY---------------------RYKVGDILRVAGFHNASPH 426 (591)
Q Consensus 375 ~~~~~~~~~~~~~~ev~~G--~~yelvvTt~-----~Gly---------------------RYr~GDvV~v~gf~~~~P~ 426 (591)
.++.+| +.|||+|... .||| .|+|||+++++ ....
T Consensus 310 -------------~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~~~~~~~g~~~~~~~~~~~~~TGDlg~~d----~dG~ 372 (499)
T PLN03051 310 -------------VPYPDDQPCVGEVALAPPMLGASDRLLNADHDKVYYKGMPMYGSKGMPLRRHGDIMKRT----PGGY 372 (499)
T ss_pred -------------CCCCCCCCcceEEEEecCcCCCCccccCCcccceeeecCCccccCCcceeecCCeEEEC----CCCc
Confidence 134556 4799999531 2332 37999999996 3668
Q ss_pred EEEeeecCceecccccccCHHHHHHHHHH
Q 007728 427 FHFVRRKDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 427 i~f~gR~~~~l~~~Geki~e~~v~~av~~ 455 (591)
+.|+||.+|+|+++|++|++.|||++|.+
T Consensus 373 l~~~gR~~d~ik~~G~~v~p~EIE~~l~~ 401 (499)
T PLN03051 373 FCVQGRADDTMNLGGIKTSSVEIERACDR 401 (499)
T ss_pred EEEEeccCCEEeeCCEECCHHHHHHHHHh
Confidence 99999999999999999999999999975
No 37
>PRK05852 acyl-CoA synthetase; Validated
Probab=99.38 E-value=1e-10 Score=130.81 Aligned_cols=130 Identities=13% Similarity=0.148 Sum_probs=89.6
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCC----C--CC-CCCceeecCCCeEEEEEECCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPM----C--KT-SEASYTIMPNMAYFEFLLHDPGS 372 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~----~--~~-~~~~~~l~~~~~~~EFip~~~~~ 372 (591)
++.+.+||. ...++.+++.+ +++++ +.||+||+...+...+. + .+ ...+.+-.+.....++++.+.
T Consensus 297 lr~i~~~G~~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~g~~~~i~d~~g-- 372 (534)
T PRK05852 297 LRFIRSCSAPLTAETAQALQTEF-AAPVV-CAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGRSTGAQIRIVGSDG-- 372 (534)
T ss_pred eeEEEECCCCCCHHHHHHHHHHh-CCChh-hccCccccchhhhcCCccccccccCcccccccCCCCCCCeEEEECCCC--
Confidence 788888874 45667778888 78998 89999997432211110 0 00 011221112233455554332
Q ss_pred CCCCCCCCCCccccccccCCCceEEEEEcc---ccceec-------------cccCCEEEEccccCCCCeEEEeeecCce
Q 007728 373 PASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR-------------YKVGDILRVAGFHNASPHFHFVRRKDAL 436 (591)
Q Consensus 373 ~~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~ 436 (591)
.++.+|+.+||+|+. ..|+|+ |+|||+++++ ....+.|.||.+|+
T Consensus 373 ---------------~~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~~~g~~~TGD~~~~d----~dG~l~~~gR~~d~ 433 (534)
T PRK05852 373 ---------------LPLPAGAVGEVWLRGTTVVRGYLGDPTITAANFTDGWLRTGDLGSLS----AAGDLSIRGRIKEL 433 (534)
T ss_pred ---------------CCCCCCCceEEEEecCcccchhcCCcccchhhhcCCCcccCceEEEe----CCCcEEEEecchhh
Confidence 245689999999975 456664 8999999996 35689999999999
Q ss_pred ecccccccCHHHHHHHHHH
Q 007728 437 LSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 437 l~~~Geki~e~~v~~av~~ 455 (591)
++++|+++.+.+||.++.+
T Consensus 434 i~~~G~~v~~~~iE~~l~~ 452 (534)
T PRK05852 434 INRGGEKISPERVEGVLAS 452 (534)
T ss_pred EEECCEEECHHHHHHHHHh
Confidence 9999999999999999976
No 38
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=99.38 E-value=7.9e-11 Score=129.87 Aligned_cols=128 Identities=13% Similarity=0.144 Sum_probs=83.2
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCCCCC-------CCceeecCCCeEEEEEECCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCKTS-------EASYTIMPNMAYFEFLLHDPGS 372 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~-------~~~~~l~~~~~~~EFip~~~~~ 372 (591)
++.+++||. ....+.+.+.+++++++ +.||+||....+...+.++.. ..+. ..++.. ...++ +.+
T Consensus 262 l~~i~~~G~~l~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~-~~i~d--~~~ 336 (503)
T PRK04813 262 LTHFLFCGEELPHKTAKKLLERFPSATIY-NTYGPTEATVAVTSIEITDEMLDQYKRLPIGY-AKPDSP-LLIID--EEG 336 (503)
T ss_pred ceEEEEecCcCCHHHHHHHHHHCCCceEE-eCcccchheeEEEEEEecccccccCCCCcccc-cCCCCE-EEEEC--CCC
Confidence 566666663 46667788888788888 999999963322111111100 0111 111111 11222 111
Q ss_pred CCCCCCCCCCccccccccCCCceEEEEEccc---ccee-----------------ccccCCEEEEccccCCCCeEEEeee
Q 007728 373 PASTSDFQPPKLVDLVDVEVGKEYEPIITNY---TGVY-----------------RYKVGDILRVAGFHNASPHFHFVRR 432 (591)
Q Consensus 373 ~~~~~~~~~~~~~~~~ev~~G~~yelvvTt~---~Gly-----------------RYr~GDvV~v~gf~~~~P~i~f~gR 432 (591)
..+.+|+.|||+|+.. .||| -|+|||++++ . ...+.|.||
T Consensus 337 ---------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~----~g~~~~~GR 396 (503)
T PRK04813 337 ---------------TKLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-E----DGLLFYQGR 396 (503)
T ss_pred ---------------CCCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe-e----CCeEEEecc
Confidence 2356788999999752 2222 2999999998 3 458999999
Q ss_pred cCceecccccccCHHHHHHHHHH
Q 007728 433 KDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 433 ~~~~l~~~Geki~e~~v~~av~~ 455 (591)
.+|+++++|+|+++.+||+++..
T Consensus 397 ~~d~i~~~G~~v~~~~iE~~l~~ 419 (503)
T PRK04813 397 IDFQIKLNGYRIELEEIEQNLRQ 419 (503)
T ss_pred ccceEEECcEEeCHHHHHHHHHh
Confidence 99999999999999999999976
No 39
>PRK06164 acyl-CoA synthetase; Validated
Probab=99.38 E-value=8.3e-11 Score=131.46 Aligned_cols=110 Identities=21% Similarity=0.232 Sum_probs=75.8
Q ss_pred CCCeeccccccccccccccCCCCCCC-----CCCceeecCCCeEEEEEECCCCCCCCCCCCCCCccccccccCCCceEEE
Q 007728 324 SLPIASMLYSSSECFFGLNLNPMCKT-----SEASYTIMPNMAYFEFLLHDPGSPASTSDFQPPKLVDLVDVEVGKEYEP 398 (591)
Q Consensus 324 g~~v~~~~ygaSEg~~~i~~~~~~~~-----~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~~~~~~~ev~~G~~yel 398 (591)
|++++ +.||+||+...+........ ...+..+. .....+++++++. ..+..|+.|||
T Consensus 319 ~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~i~d~~~~----------------~~~~~g~~Gel 380 (540)
T PRK06164 319 GVPLT-GLYGSSEVQALVALQPATDPVSVRIEGGGRPAS-PEARVRARDPQDG----------------ALLPDGESGEI 380 (540)
T ss_pred CCcee-cceeeccccceeeccCCCCCCcceeccCccccC-CCeEEEEecCCCC----------------cCCCCCCeeEE
Confidence 78898 99999997433222111100 01122211 2234556654322 14578999999
Q ss_pred EEcc---cccee--------------ccccCCEEEEccccCCCCeEEEeeecCceecccccccCHHHHHHHHHH
Q 007728 399 IITN---YTGVY--------------RYKVGDILRVAGFHNASPHFHFVRRKDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 399 vvTt---~~Gly--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~Geki~e~~v~~av~~ 455 (591)
+|++ ..||| -|+|||+++++. ...+.|.||.++++++.|+++++.+|++++..
T Consensus 381 ~v~g~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~ 450 (540)
T PRK06164 381 EIRAPSLMRGYLDNPDATARALTDDGYFRTGDLGYTRG----DGQFVYQTRMGDSLRLGGFLVNPAEIEHALEA 450 (540)
T ss_pred EEecccccccccCCchhhhhcccCCCceecCCeEEEcC----CceEEEEeecCCeEEECCEEcCHHHHHHHHHh
Confidence 9986 44554 299999999974 56889999999999999999999999999975
No 40
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.38 E-value=1.5e-11 Score=137.99 Aligned_cols=130 Identities=18% Similarity=0.193 Sum_probs=90.4
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccc-cccCCCCC---CCCCCceeecCCCeEEEEEECCCCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFF-GLNLNPMC---KTSEASYTIMPNMAYFEFLLHDPGSPAS 375 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~-~i~~~~~~---~~~~~~~~l~~~~~~~EFip~~~~~~~~ 375 (591)
++++++||+ ....+++++.++..+++ .+||+||+.. .+...+.. .....+. ..|+ .|..-.+..+
T Consensus 293 lr~~~~gg~~~~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~-~~pg---~~v~Ivd~~~--- 364 (534)
T COG0318 293 LRLVLSGGAPLPPELLERFEERFGPIAIL-EGYGLTETSPVVTINPPDDLLAKPGSVGR-PLPG---VEVRIVDPDG--- 364 (534)
T ss_pred eEEEEecCCcCCHHHHHHHHHHhCCCceE-EeecccccCceeecCCCchhhhcCCcccc-cCCC---cEEEEEeCCC---
Confidence 899999996 46778888888657788 9999999853 32221211 1111122 1122 3333333211
Q ss_pred CCCCCCCccccccccCCCceEEEEEc---cccceec--------------cccCCEEEEccccCCCCeEEEeeecCceec
Q 007728 376 TSDFQPPKLVDLVDVEVGKEYEPIIT---NYTGVYR--------------YKVGDILRVAGFHNASPHFHFVRRKDALLS 438 (591)
Q Consensus 376 ~~~~~~~~~~~~~ev~~G~~yelvvT---t~~GlyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 438 (591)
. ++.+|+.|||+|. -..|+|+ |+|||+++++. ...+.|+||.+|+|+
T Consensus 365 -----~-------~~~pg~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~----~G~l~i~gR~kd~I~ 428 (534)
T COG0318 365 -----G-------EVLPGEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDE----DGYLYIVGRLKDLII 428 (534)
T ss_pred -----C-------ccCCCCceEEEEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcC----CccEEEEeccceEEE
Confidence 0 1233889999994 3566663 89999998874 578999999999999
Q ss_pred ccccccCHHHHHHHHHHH
Q 007728 439 IDYDKTDEADLQKAVENA 456 (591)
Q Consensus 439 ~~Geki~e~~v~~av~~a 456 (591)
.+||+|++.+||.++.+.
T Consensus 429 ~gG~ni~p~eiE~~l~~~ 446 (534)
T COG0318 429 SGGENIYPEEIEAVLAEH 446 (534)
T ss_pred eCCeEECHHHHHHHHHhC
Confidence 999999999999999874
No 41
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=99.37 E-value=3.9e-10 Score=129.71 Aligned_cols=229 Identities=16% Similarity=0.129 Sum_probs=124.3
Q ss_pred CCceeeEEEecCh---HHHHHHHHHHhC-CCCeeccccccccccccccC-CCCCCC--CCCceeecCCCeEEEEEECCCC
Q 007728 299 NTKYLDAVATGSM---AQYIHLLDYYSG-SLPIASMLYSSSECFFGLNL-NPMCKT--SEASYTIMPNMAYFEFLLHDPG 371 (591)
Q Consensus 299 ~l~~l~~~~~g~~---~~y~~~l~~~~~-g~~v~~~~ygaSEg~~~i~~-~~~~~~--~~~~~~l~~~~~~~EFip~~~~ 371 (591)
+++.|+.+++||. ....+.+.+.++ ++.+. +.||+||....+.. .+..+. +..+. ..++ .|..-.++.
T Consensus 382 ~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~-~~yG~TE~~~~~~~~~~~~~~~~g~~g~-p~~g---~~v~ivd~~ 456 (652)
T TIGR01217 382 DLSALQCVASTGSPLPPDGFRWVYDEIKADVWLA-SISGGTDICSCFAGANPTLPVHIGEIQA-PGLG---TAVQSWDPE 456 (652)
T ss_pred ChhheeEEEeecCCCCHHHHHHHHHHhCCCceEE-eccCHHHHhccccCCCCCCCCcCCccCC-CcCC---CceEEECCC
Confidence 3455899999885 344455655553 35555 88999995322211 111110 01111 1111 122222222
Q ss_pred CCCCCCCCCCCccccccccCCCceEEEEEccc-----ccee------c------------cccCCEEEEccccCCCCeEE
Q 007728 372 SPASTSDFQPPKLVDLVDVEVGKEYEPIITNY-----TGVY------R------------YKVGDILRVAGFHNASPHFH 428 (591)
Q Consensus 372 ~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt~-----~Gly------R------------Yr~GDvV~v~gf~~~~P~i~ 428 (591)
+ .++ +|+.|||+|+.. .||| + |+|||+++++. ...+.
T Consensus 457 g---------------~~~-~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~----dG~l~ 516 (652)
T TIGR01217 457 G---------------KPV-TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTP----RGGIV 516 (652)
T ss_pred C---------------CCC-CCCccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECC----CCcEE
Confidence 1 123 488999999752 3454 1 78999999973 67899
Q ss_pred EeeecCceecccccccCHHHHHHHHHHHHHhhcccCceEEeeEeee--cCCCCCceeEEEEEEeecCCCCCCChHHHHHH
Q 007728 429 FVRRKDALLSIDYDKTDEADLQKAVENASRLLREFDTRILEYTSYA--EKKTNPGHHVIYWEILVKDPANSPTDDVLKQC 506 (591)
Q Consensus 429 f~gR~~~~l~~~Geki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~--~~~~~p~~Y~l~~E~~~~~~~~~~~~~~~~~~ 506 (591)
|+||.||+|+++|++|.+.|||.+|.+. .+ +.+-+++. +.. ..-.-+.|+.+.. +. ..+.+..+++
T Consensus 517 i~GR~dd~I~~~G~ri~p~EIE~~l~~~------p~--V~eaavvg~~~~~-~ge~~~afVv~~~-~~--~~~~~~~~~l 584 (652)
T TIGR01217 517 IHGRSDSTLNPQGVRMGSAEIYNAVERL------DE--VRESLCIGQEQPD-GGYRVVLFVHLAP-GA--TLDDALLDRI 584 (652)
T ss_pred EEecccCeEecCCEEcCHHHHHHHHHhC------CC--cceEEEEeeecCC-CCEEEEEEEEECC-CC--CCCHHHHHHH
Confidence 9999999999999999999999999863 12 22433322 221 1113346666642 21 2222222233
Q ss_pred HHHHHhhhCHHHHHhhhccCc-cCCeEEEEeC---CccHHHHHHHHHhcCCCCCCCccccccCCHhHHHHHhh
Q 007728 507 CLAMEESLDSAYREARVVDKT-IGPLEIRLVK---TGTFEELMDYAISRGASINQYKVARCVGSTSILKLLDS 575 (591)
Q Consensus 507 ~~~ld~~Ln~~Y~~~R~~~g~-l~p~~v~~v~---~gtf~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~ 575 (591)
.+.+.+.| +. ..|-+|.+|+ ...=.+.++..+.+=.....++.+--+.|++.++.+.+
T Consensus 585 ~~~~~~~l-----------~~~~~P~~i~~v~~lP~T~sGKi~r~~Lr~~~~~~~~~~~~~~~~~~~l~~~~~ 646 (652)
T TIGR01217 585 KRTIRAGL-----------SPRHVPDEIIEVPGIPHTLTGKRVEVAVKRVLQGTPVDNPGAIDNPELLDLYEE 646 (652)
T ss_pred HHHHHhhC-----------CCCcCCCEEEECCCCCCCCCccChHHHHHHHHcCCCCCCcccccCHHHHHHHHH
Confidence 33333333 22 2344566643 22222333333322122234667777889999988854
No 42
>PRK13382 acyl-CoA synthetase; Provisional
Probab=99.36 E-value=1e-10 Score=131.05 Aligned_cols=128 Identities=15% Similarity=0.111 Sum_probs=88.2
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCC---CCCCCceeecCCCeEEEEEECCCCCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMC---KTSEASYTIMPNMAYFEFLLHDPGSPAST 376 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~---~~~~~~~~l~~~~~~~EFip~~~~~~~~~ 376 (591)
++.+++||. ...+..+++.+ |.+++ +.||+||+.......+.. .+...|. .. ...-+++++.+.
T Consensus 314 lr~i~~gG~~l~~~~~~~~~~~~-~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~-p~-~~~~~~i~d~~~------ 383 (537)
T PRK13382 314 LRFAAASGSRMRPDVVIAFMDQF-GDVIY-NNYNATEAGMIATATPADLRAAPDTAGR-PA-EGTEIRILDQDF------ 383 (537)
T ss_pred eeEEEEcCCCCCHHHHHHHHHHc-CCcEE-ecccccccCcceecChhHhccCCCCccc-cC-cCcEEEEECCCC------
Confidence 788888884 45667788888 67888 999999974322111100 0011111 11 223455554321
Q ss_pred CCCCCCccccccccCCCceEEEEEcc---cccee----------ccccCCEEEEccccCCCCeEEEeeecCceecccccc
Q 007728 377 SDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY----------RYKVGDILRVAGFHNASPHFHFVRRKDALLSIDYDK 443 (591)
Q Consensus 377 ~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly----------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~Gek 443 (591)
.++..|+.+||+|++ +.||+ .|+|||++++.. ...+.|+||.+|++++.|++
T Consensus 384 -----------~~~~~g~~GEl~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~dd~ik~~G~~ 448 (537)
T PRK13382 384 -----------REVPTGEVGTIFVRNDTQFDGYTSGSTKDFHDGFMASGDVGYLDE----NGRLFVVGRDDEMIVSGGEN 448 (537)
T ss_pred -----------CCCCCCCeeEEEEEcCCcccCccccchhhccCCCEeeCceEEEeC----CCcEEEeccccceeEECCEE
Confidence 245679999999975 23432 589999999963 56899999999999999999
Q ss_pred cCHHHHHHHHHH
Q 007728 444 TDEADLQKAVEN 455 (591)
Q Consensus 444 i~e~~v~~av~~ 455 (591)
|++.+||.+|.+
T Consensus 449 v~~~eIE~~l~~ 460 (537)
T PRK13382 449 VYPIEVEKTLAT 460 (537)
T ss_pred ECHHHHHHHHHh
Confidence 999999999976
No 43
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.36 E-value=2.2e-11 Score=136.21 Aligned_cols=129 Identities=14% Similarity=0.144 Sum_probs=87.9
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCC-CC-CCCCceeecCCCeEEEEEECCCCCCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPM-CK-TSEASYTIMPNMAYFEFLLHDPGSPASTS 377 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~-~~-~~~~~~~l~~~~~~~EFip~~~~~~~~~~ 377 (591)
++++++||. ....+++.+.+ +++++ +.||+||+...+...+. .. ....+.. .++ .-...++++..
T Consensus 307 l~~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~G~~-~~g-~~~~i~d~~~~------ 376 (546)
T PRK08314 307 LRYIGGGGAAMPEAVAERLKELT-GLDYV-EGYGLTETMAQTHSNPPDRPKLQCLGIP-TFG-VDARVIDPETL------ 376 (546)
T ss_pred hheeeeccccCCHHHHHHHHHHc-CCcEE-ecccccccccceecCCCcCCCCCccCcc-cCC-eEEEEEeCCCC------
Confidence 678888884 35567777778 78998 99999997432211110 00 0011111 122 22334443222
Q ss_pred CCCCCccccccccCCCceEEEEEcc---cccee-----------------ccccCCEEEEccccCCCCeEEEeeecCcee
Q 007728 378 DFQPPKLVDLVDVEVGKEYEPIITN---YTGVY-----------------RYKVGDILRVAGFHNASPHFHFVRRKDALL 437 (591)
Q Consensus 378 ~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly-----------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l 437 (591)
.+++.|+.|||+|.. ..|+| -|+|||+++++. ...+.++||.+|++
T Consensus 377 ----------~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~~d~i 442 (546)
T PRK08314 377 ----------EELPPGEVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDE----EGYFFITDRLKRMI 442 (546)
T ss_pred ----------cCCCCCCceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcC----CCcEEEEecchhhE
Confidence 245789999999964 44554 399999999963 56899999999999
Q ss_pred cccccccCHHHHHHHHHH
Q 007728 438 SIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 438 ~~~Geki~e~~v~~av~~ 455 (591)
+++|+++++.+||.+|.+
T Consensus 443 ~~~G~~v~~~eIE~~i~~ 460 (546)
T PRK08314 443 NASGFKVWPAEVENLLYK 460 (546)
T ss_pred EeCCEEECHHHHHHHHHh
Confidence 999999999999999976
No 44
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=99.36 E-value=2.4e-11 Score=130.18 Aligned_cols=129 Identities=19% Similarity=0.188 Sum_probs=87.8
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeecccccccccccccc---CCCCCCCC----CCceeecCCCeEEEEEECCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLN---LNPMCKTS----EASYTIMPNMAYFEFLLHDPGS 372 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~---~~~~~~~~----~~~~~l~~~~~~~EFip~~~~~ 372 (591)
++.+.+||. ...++.+++.+++++++ ..||+||+...+. ........ ..+. ..++ ....+++++ +
T Consensus 236 l~~v~~~g~~~~~~~~~~~~~~~~~~~i~-~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~~~~--~ 310 (408)
T TIGR01733 236 LRLVILGGEALTPALVDRWRARGPGARLI-NLYGPTETTVWSTATLVDADDAPRESPVPIGR-PLAN-TRLYVLDDD--L 310 (408)
T ss_pred ceEEEEeCccCCHHHHHHHHHhCCCcEEE-ecccCCceEEEEEEEEcCccccCCccccccCc-ccCC-ceEEEECCC--C
Confidence 677777774 46678888888668998 9999999743221 11111000 0111 1122 223333322 1
Q ss_pred CCCCCCCCCCccccccccCCCceEEEEEcc---cccee----------------------ccccCCEEEEccccCCCCeE
Q 007728 373 PASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY----------------------RYKVGDILRVAGFHNASPHF 427 (591)
Q Consensus 373 ~~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly----------------------RYr~GDvV~v~gf~~~~P~i 427 (591)
..+..|+.|||+|+. ..|+| .|+|||++.++. ..++
T Consensus 311 ---------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~----~g~~ 371 (408)
T TIGR01733 311 ---------------RPVPVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLP----DGNL 371 (408)
T ss_pred ---------------CCCCCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcC----CCCE
Confidence 245679999999985 34454 499999999974 4579
Q ss_pred EEeeecCceecccccccCHHHHHHHHHH
Q 007728 428 HFVRRKDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 428 ~f~gR~~~~l~~~Geki~e~~v~~av~~ 455 (591)
.|.||.+|+++++|+|+++.+||+++..
T Consensus 372 ~~~gR~~~~i~~~G~~v~~~~ie~~l~~ 399 (408)
T TIGR01733 372 EFLGRIDDQVKIRGYRIELGEIEAALLR 399 (408)
T ss_pred EEeeccCCEEEeCeEEechHHHHHHHhc
Confidence 9999999999999999999999999975
No 45
>PRK07638 acyl-CoA synthetase; Validated
Probab=99.36 E-value=2.7e-11 Score=133.57 Aligned_cols=129 Identities=11% Similarity=0.106 Sum_probs=89.4
Q ss_pred eeEEEecCh--HHHHHHHHHHhCCCCeeccccccccccccccCCCCC---CCCCCceeecCCCeEEEEEECCCCCCCCCC
Q 007728 303 LDAVATGSM--AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMC---KTSEASYTIMPNMAYFEFLLHDPGSPASTS 377 (591)
Q Consensus 303 l~~~~~g~~--~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~---~~~~~~~~l~~~~~~~EFip~~~~~~~~~~ 377 (591)
++.+.+|+. ....+++.+.+++++++ +.||+||+.......+.. .+...+.. . ....+++++.+ +
T Consensus 256 ~~~~~~G~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~-~-~~~~~~i~d~~--g----- 325 (487)
T PRK07638 256 MKIISSGAKWEAEAKEKIKNIFPYAKLY-EFYGASELSFVTALVDEESERRPNSVGRP-F-HNVQVRICNEA--G----- 325 (487)
T ss_pred eEEEEcCCCCCHHHHHHHHHHcCCCeEE-EEecCCccCceEEecccccCCCCCCCCcc-c-CCcEEEEECCC--C-----
Confidence 455555552 45667788888889998 999999984322211111 01112221 1 23455655432 1
Q ss_pred CCCCCccccccccCCCceEEEEEcc---cccee-------------ccccCCEEEEccccCCCCeEEEeeecCceecccc
Q 007728 378 DFQPPKLVDLVDVEVGKEYEPIITN---YTGVY-------------RYKVGDILRVAGFHNASPHFHFVRRKDALLSIDY 441 (591)
Q Consensus 378 ~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~G 441 (591)
.++++|+.|||+|++ ..|+| .|+|||++.+. ....+.|+||.+|+++++|
T Consensus 326 ----------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~d----~~g~l~i~GR~~d~i~~~G 391 (487)
T PRK07638 326 ----------EEVQKGEIGTVYVKSPQFFMGYIIGGVLARELNADGWMTVRDVGYED----EEGFIYIVGREKNMILFGG 391 (487)
T ss_pred ----------CCCCCCCCeEEEEecccceeeecCCHHHHhhhccCCcEecCccEeEc----CCCeEEEEecCCCeEEeCC
Confidence 245789999999975 45555 37999999986 3678999999999999999
Q ss_pred cccCHHHHHHHHHH
Q 007728 442 DKTDEADLQKAVEN 455 (591)
Q Consensus 442 eki~e~~v~~av~~ 455 (591)
+++++.+||+++.+
T Consensus 392 ~~v~~~eiE~~l~~ 405 (487)
T PRK07638 392 INIFPEEIESVLHE 405 (487)
T ss_pred EEECHHHHHHHHHh
Confidence 99999999999976
No 46
>PLN02736 long-chain acyl-CoA synthetase
Probab=99.35 E-value=1.2e-11 Score=142.16 Aligned_cols=132 Identities=10% Similarity=0.101 Sum_probs=87.2
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCC--CCCCCCceeecCCCeEEEEEECCCCCCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPM--CKTSEASYTIMPNMAYFEFLLHDPGSPASTS 377 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~--~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~ 377 (591)
++.+++||+ ....+.+++.+ |++++ ++||+||+...+..... ..+...+. ..|+ .-..+++.++..
T Consensus 378 lr~~~~gGa~l~~~~~~~~~~~~-g~~~~-~~YG~TE~~~~~~~~~~~~~~~~~vG~-p~pg-~~v~i~d~~~~~----- 448 (651)
T PLN02736 378 VRFMSSGASPLSPDVMEFLRICF-GGRVL-EGYGMTETSCVISGMDEGDNLSGHVGS-PNPA-CEVKLVDVPEMN----- 448 (651)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHh-CCCeE-EEechHHhchheeccCCCCCCCCccCC-ccCc-eEEEEEEccccC-----
Confidence 788899885 35556666677 68888 99999997543221111 01111121 1122 234455433211
Q ss_pred CCCCCccccccccCCCceEEEEEcc---ccceec--------------cccCCEEEEccccCCCCeEEEeeecCceecc-
Q 007728 378 DFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR--------------YKVGDILRVAGFHNASPHFHFVRRKDALLSI- 439 (591)
Q Consensus 378 ~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~- 439 (591)
. ..+.+++..|||+|.. +.|||. |+|||+++++ ....+.|+||.+|++++
T Consensus 449 ------~--~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d----~dG~l~i~GR~kd~ik~~ 516 (651)
T PLN02736 449 ------Y--TSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWL----PGGRLKIIDRKKNIFKLA 516 (651)
T ss_pred ------c--ccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEc----CCCcEEEEEechhheEcC
Confidence 0 0122445578999964 667773 8999999997 35689999999999997
Q ss_pred cccccCHHHHHHHHHH
Q 007728 440 DYDKTDEADLQKAVEN 455 (591)
Q Consensus 440 ~Geki~e~~v~~av~~ 455 (591)
+|++|++.+||+++.+
T Consensus 517 ~G~~V~p~eIE~~l~~ 532 (651)
T PLN02736 517 QGEYIAPEKIENVYAK 532 (651)
T ss_pred CCcEechHHHHHHHhc
Confidence 6999999999999976
No 47
>PRK06145 acyl-CoA synthetase; Validated
Probab=99.35 E-value=3.2e-11 Score=133.12 Aligned_cols=130 Identities=11% Similarity=0.092 Sum_probs=90.6
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCC---CC-CCCCCceeecCCCeEEEEEECCCCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNP---MC-KTSEASYTIMPNMAYFEFLLHDPGSPAS 375 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~---~~-~~~~~~~~l~~~~~~~EFip~~~~~~~~ 375 (591)
++++++||. ...++.+++.+++++++ +.||+||+........ .+ .+...+.. .++ .-.+.++.+ +
T Consensus 266 l~~~~~gG~~~~~~~~~~~~~~~~~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~-~~~-~~~~i~~~~--~--- 337 (497)
T PRK06145 266 LAWCIGGGEKTPESRIRDFTRVFTRARYI-DAYGLTETCSGDTLMEAGREIEKIGSTGRA-LAH-VEIRIADGA--G--- 337 (497)
T ss_pred ceEEEecCCCCCHHHHHHHHHHcCCCceE-EeecCcccCCcceeccCccccccCCCcccC-CCC-ceEEEECCC--C---
Confidence 678888884 45667788888889998 9999999854221111 01 11112221 122 234444322 1
Q ss_pred CCCCCCCccccccccCCCceEEEEEcc---ccceec-------------cccCCEEEEccccCCCCeEEEeeecCceecc
Q 007728 376 TSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR-------------YKVGDILRVAGFHNASPHFHFVRRKDALLSI 439 (591)
Q Consensus 376 ~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 439 (591)
..+.+|+.+||+++. ..|+|. |+|||+++... ...+.|+||.++++++
T Consensus 338 ------------~~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~~~~i~~ 401 (497)
T PRK06145 338 ------------RWLPPNMKGEICMRGPKVTKGYWKDPEKTAEAFYGDWFRSGDVGYLDE----EGFLYLTDRKKDMIIS 401 (497)
T ss_pred ------------CCCCCCCceEEEEECcchhhhhcCChHHHHHHHhCCCeeccceEEEcC----CCcEEEeccccceEEe
Confidence 134678999999975 567773 99999999963 5689999999999999
Q ss_pred cccccCHHHHHHHHHHH
Q 007728 440 DYDKTDEADLQKAVENA 456 (591)
Q Consensus 440 ~Geki~e~~v~~av~~a 456 (591)
.|+++.+.+||.+|.+.
T Consensus 402 ~G~~v~~~~IE~~l~~~ 418 (497)
T PRK06145 402 GGENIASSEVERVIYEL 418 (497)
T ss_pred CCeEECHHHHHHHHHhC
Confidence 99999999999999773
No 48
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=99.35 E-value=3.6e-11 Score=134.54 Aligned_cols=127 Identities=9% Similarity=0.108 Sum_probs=87.0
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeecccccccccc-ccccCCCCCC----CCCCceeecCCCeEEEEEECCCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECF-FGLNLNPMCK----TSEASYTIMPNMAYFEFLLHDPGSPA 374 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~-~~i~~~~~~~----~~~~~~~l~~~~~~~EFip~~~~~~~ 374 (591)
++.+++||. ....+++++.+ |++++ +.||+||+. ++.. .+... +...+. ..|+ .-+++++.+ +
T Consensus 312 l~~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~-~~~~~~~~~~~~~G~-~~~g-~~v~i~~~~--~-- 382 (538)
T TIGR03208 312 LFTFLCAGAPIPGILVERAWELL-GALIV-SAWGMTENGAVTVT-EPDDALEKASTTDGR-PLPG-VEVKVIDAN--G-- 382 (538)
T ss_pred ceEEEEcCCCCCHHHHHHHHHHc-CCeEE-eeeccCcCCCcccc-CcccchhhccCcccc-cCCC-CEEEEECCC--C--
Confidence 677888874 34556677777 78998 999999973 2221 11100 001111 1222 234444322 1
Q ss_pred CCCCCCCCccccccccCCCceEEEEEcc---ccceec------------cccCCEEEEccccCCCCeEEEeeecCceecc
Q 007728 375 STSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR------------YKVGDILRVAGFHNASPHFHFVRRKDALLSI 439 (591)
Q Consensus 375 ~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 439 (591)
.++..|+.|||+|+. ..|+|. |+|||+++++ ....+.|+||.++++++
T Consensus 383 -------------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~TGD~~~~~----~~g~l~~~gR~~~~i~~ 445 (538)
T TIGR03208 383 -------------AKLSQGETGRLLVRGCSNFGGYLKRPHLNSTDAEGWFDTGDLAFQD----AEGYIRINGRSKDVIIR 445 (538)
T ss_pred -------------CCCcCCCCcEEEEecCcccccccCCcccccccCCCceeccceEEEC----CCCcEEEEeccCceEEE
Confidence 135679999999975 456663 9999999996 35689999999999999
Q ss_pred cccccCHHHHHHHHHH
Q 007728 440 DYDKTDEADLQKAVEN 455 (591)
Q Consensus 440 ~Geki~e~~v~~av~~ 455 (591)
+|+|+.+.+||.+|.+
T Consensus 446 ~G~~v~p~eIE~~l~~ 461 (538)
T TIGR03208 446 GGENIPVVEIENLLYQ 461 (538)
T ss_pred CCEEECHHHHHHHHhc
Confidence 9999999999999976
No 49
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=99.35 E-value=4.2e-11 Score=134.09 Aligned_cols=128 Identities=10% Similarity=0.148 Sum_probs=87.4
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCCC----CCCCceeecCCCeEEEEEECCCCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCK----TSEASYTIMPNMAYFEFLLHDPGSPAS 375 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~----~~~~~~~l~~~~~~~EFip~~~~~~~~ 375 (591)
++++.+||. ....+++.+.+ |++++ +.||+||+.+.... ...+ ....+..+.|+ ...+.++ +.+
T Consensus 302 l~~v~~gg~~l~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~-~~~~~~~~~~~~G~p~~~~-~~v~i~d--~~~--- 372 (536)
T PRK10946 302 LKLLQVGGARLSETLARRIPAEL-GCQLQ-QVFGMAEGLVNYTR-LDDSDERIFTTQGRPMSPD-DEVWVAD--ADG--- 372 (536)
T ss_pred eeEEEECCCCCCHHHHHHHHHhc-CCeEE-Eeecccccceeeec-CCCccccccccCCcccCCC-ceEEEEC--CCC---
Confidence 788888885 35556666777 79998 99999997544311 1100 00111111122 1233332 111
Q ss_pred CCCCCCCccccccccCCCceEEEEEcc---ccceec--------------cccCCEEEEccccCCCCeEEEeeecCceec
Q 007728 376 TSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR--------------YKVGDILRVAGFHNASPHFHFVRRKDALLS 438 (591)
Q Consensus 376 ~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 438 (591)
.++..|+.+||+|+. ..|+|. |+|||+++.+. ...+.|.||.+|+++
T Consensus 373 ------------~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~----~G~l~~~gR~~d~i~ 436 (536)
T PRK10946 373 ------------NPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDP----DGYITVVGREKDQIN 436 (536)
T ss_pred ------------CCCCCCCccEEEEecCccchhhcCCcccchhhcccCCceecCceEEECC----CCcEEEeccccceee
Confidence 245689999999963 556662 99999999973 557999999999999
Q ss_pred ccccccCHHHHHHHHHH
Q 007728 439 IDYDKTDEADLQKAVEN 455 (591)
Q Consensus 439 ~~Geki~e~~v~~av~~ 455 (591)
++|+++++.+||.+|..
T Consensus 437 ~~G~~v~~~eiE~~l~~ 453 (536)
T PRK10946 437 RGGEKIAAEEIENLLLR 453 (536)
T ss_pred cCCEEEcHHHHHHHHHh
Confidence 99999999999999976
No 50
>PRK06839 acyl-CoA synthetase; Validated
Probab=99.35 E-value=2.3e-10 Score=126.08 Aligned_cols=128 Identities=14% Similarity=0.153 Sum_probs=85.9
Q ss_pred eeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccc-cccCCCCC---CCCCCceeecCCCeEEEEEECCCCCCC
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFF-GLNLNPMC---KTSEASYTIMPNMAYFEFLLHDPGSPA 374 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~-~i~~~~~~---~~~~~~~~l~~~~~~~EFip~~~~~~~ 374 (591)
.++.+++||. ....+.+++. |+++. +.||+||+.. ........ .....+.. .+ ..-+++++++.
T Consensus 265 ~lr~~~~gG~~~~~~~~~~~~~~--g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p-~~-~~~~~i~d~~~---- 335 (496)
T PRK06839 265 SVRWFYNGGAPCPEELMREFIDR--GFLFG-QGFGMTETSPTVFMLSEEDARRKVGSIGKP-VL-FCDYELIDENK---- 335 (496)
T ss_pred ccceEEECCCCCCHHHHHHHHHh--CCeeE-eeccCCCCCcceEecccccccccCCCCccc-CC-CceEEEECCCc----
Confidence 3788888885 4555666664 78988 9999999743 21111110 00011111 12 22344444322
Q ss_pred CCCCCCCCccccccccCCCceEEEEEcc---ccceec-------------cccCCEEEEccccCCCCeEEEeeecCceec
Q 007728 375 STSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR-------------YKVGDILRVAGFHNASPHFHFVRRKDALLS 438 (591)
Q Consensus 375 ~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 438 (591)
.++.+|+.|||+|++ ..|+|. |+|||+++.+. ...+.|.||.+|+++
T Consensus 336 -------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~d~i~ 398 (496)
T PRK06839 336 -------------NKVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDGWLCTGDLARVDE----DGFVYIVGRKKEMII 398 (496)
T ss_pred -------------CCCCCCCceEEEEECCCcchhhcCChHHHHHHHcCCCeeecceEEEcC----CCcEEEeccccceEE
Confidence 135789999999975 335542 89999999963 568899999999999
Q ss_pred ccccccCHHHHHHHHHH
Q 007728 439 IDYDKTDEADLQKAVEN 455 (591)
Q Consensus 439 ~~Geki~e~~v~~av~~ 455 (591)
..|+|+.+.+||+++..
T Consensus 399 ~~G~~v~p~~iE~~l~~ 415 (496)
T PRK06839 399 SGGENIYPLEVEQVINK 415 (496)
T ss_pred ECCEEECHHHHHHHHHh
Confidence 99999999999999976
No 51
>PRK13383 acyl-CoA synthetase; Provisional
Probab=99.35 E-value=3e-10 Score=126.47 Aligned_cols=128 Identities=13% Similarity=0.024 Sum_probs=87.6
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCC---CCCCCceeecCCCeEEEEEECCCCCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMC---KTSEASYTIMPNMAYFEFLLHDPGSPAST 376 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~---~~~~~~~~l~~~~~~~EFip~~~~~~~~~ 376 (591)
++.+++||. ...++++++.+ |++++ +.||+||+.......+.. .+...+. ..| +.-+++++.+ +
T Consensus 294 lr~i~~gG~~l~~~~~~~~~~~~-g~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~-~~~~~i~d~~--~---- 363 (516)
T PRK13383 294 LRVVMSSGDRLDPTLGQRFMDTY-GDILY-NGYGSTEVGIGALATPADLRDAPETVGK-PVA-GCPVRILDRN--N---- 363 (516)
T ss_pred eEEEEECCCCCCHHHHHHHHHHc-Cchhh-hcccccccccceeccccccccCCCcccC-CCC-CcEEEEECCC--C----
Confidence 788888885 45667778888 68888 999999974322111100 0001111 112 2234555422 1
Q ss_pred CCCCCCccccccccCCCceEEEEEcc---cccee----------ccccCCEEEEccccCCCCeEEEeeecCceecccccc
Q 007728 377 SDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY----------RYKVGDILRVAGFHNASPHFHFVRRKDALLSIDYDK 443 (591)
Q Consensus 377 ~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly----------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~Gek 443 (591)
.++.+|+.|||+|+. ..||+ .|+|||+++.+. ...+.|+||.+++++++|++
T Consensus 364 -----------~~~~~g~~Gel~v~g~~~~~~Y~~~~~~~~~~g~~~TGDl~~~d~----~G~l~i~GR~~~~i~~~G~~ 428 (516)
T PRK13383 364 -----------RPVGPRVTGRIFVGGELAGTRYTDGGGKAVVDGMTSTGDMGYLDN----AGRLFIVGREDDMIISGGEN 428 (516)
T ss_pred -----------CCCCCCCceEEEEecCcccccccCCchhheecCceecceeEEEcC----CccEEEeccccceEEECCEE
Confidence 134678999999975 34555 477999999964 56889999999999999999
Q ss_pred cCHHHHHHHHHH
Q 007728 444 TDEADLQKAVEN 455 (591)
Q Consensus 444 i~e~~v~~av~~ 455 (591)
+++.+|+.+|.+
T Consensus 429 v~~~eiE~~l~~ 440 (516)
T PRK13383 429 VYPRAVENALAA 440 (516)
T ss_pred ECHHHHHHHHHh
Confidence 999999999975
No 52
>PLN02246 4-coumarate--CoA ligase
Probab=99.35 E-value=1.5e-10 Score=129.43 Aligned_cols=131 Identities=15% Similarity=0.127 Sum_probs=89.0
Q ss_pred eeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCC-------CCCCCCceeecCCCeEEEEEECCCC
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPM-------CKTSEASYTIMPNMAYFEFLLHDPG 371 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~-------~~~~~~~~~l~~~~~~~EFip~~~~ 371 (591)
.++.++.||. ....+.+++.++++++. +.||+||+...+..... ..+...+.. . ...-.++++++..
T Consensus 299 ~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~-~-~~~~~~i~d~~~~ 375 (537)
T PLN02246 299 SIRMVLSGAAPLGKELEDAFRAKLPNAVLG-QGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTV-V-RNAELKIVDPETG 375 (537)
T ss_pred ceeEEEEecCcCCHHHHHHHHHHcCCCeEe-ccccccccCcccccccccCCCCccccCCccccc-c-CCcEEEEecCCCC
Confidence 3788888885 45667788888788888 99999997432111000 000111111 1 1223444432221
Q ss_pred CCCCCCCCCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEccccCCCCeEEEeeecC
Q 007728 372 SPASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY--------------RYKVGDILRVAGFHNASPHFHFVRRKD 434 (591)
Q Consensus 372 ~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~ 434 (591)
.++..|+.|||+|+. ..|+| -|+|||+++++. ...+.|.||.+
T Consensus 376 ----------------~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~GR~d 435 (537)
T PLN02246 376 ----------------ASLPRNQPGEICIRGPQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDD----DDELFIVDRLK 435 (537)
T ss_pred ----------------CcCCCCCceEEEEECCchhccccCCchhhhhcccCCCCeeecceEEEeC----CCeEEEEeccc
Confidence 245789999999974 45554 278999999963 55899999999
Q ss_pred ceecccccccCHHHHHHHHHH
Q 007728 435 ALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 435 ~~l~~~Geki~e~~v~~av~~ 455 (591)
+++++.|++|+..+||.++.+
T Consensus 436 d~i~~~G~~i~~~eIE~~l~~ 456 (537)
T PLN02246 436 ELIKYKGFQVAPAELEALLIS 456 (537)
T ss_pred ceEEECCEEECcHHHHHHHHh
Confidence 999999999999999999976
No 53
>PRK08316 acyl-CoA synthetase; Validated
Probab=99.34 E-value=4.5e-11 Score=132.51 Aligned_cols=131 Identities=17% Similarity=0.178 Sum_probs=87.8
Q ss_pred ceeeEEEecCh---HHHHHHHHHHhCCCCeecccccccccc-ccccCCCC---CCCCCCceeecCCCeEEEEEECCCCCC
Q 007728 301 KYLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECF-FGLNLNPM---CKTSEASYTIMPNMAYFEFLLHDPGSP 373 (591)
Q Consensus 301 ~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~-~~i~~~~~---~~~~~~~~~l~~~~~~~EFip~~~~~~ 373 (591)
+.++.+..||. ....+.+++.+++++++ +.||+||+. ++....+. ......+.. .++ .-...++.+ +
T Consensus 286 ~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~-~~~-~~~~i~~~~--~- 359 (523)
T PRK08316 286 SSLRKGYYGASIMPVEVLKELRERLPGLRFY-NCYGQTEIAPLATVLGPEEHLRRPGSAGRP-VLN-VETRVVDDD--G- 359 (523)
T ss_pred ccceEEEEcCCcCCHHHHHHHHHHcCCCcee-eeecccccCccccccCccccccccCCcccC-CCC-cEEEEEcCC--C-
Confidence 34677777774 45667888888889999 999999963 22211110 000011111 111 122333321 1
Q ss_pred CCCCCCCCCccccccccCCCceEEEEEcc---cccee-------------ccccCCEEEEccccCCCCeEEEeeecCcee
Q 007728 374 ASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY-------------RYKVGDILRVAGFHNASPHFHFVRRKDALL 437 (591)
Q Consensus 374 ~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l 437 (591)
.++..|+.|||+++. ..|+| .|+|||+++++. ...+.|+||.++++
T Consensus 360 --------------~~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~i~gR~~~~i 421 (523)
T PRK08316 360 --------------NDVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAFRGGWFHSGDLGVMDE----EGYITVVDRKKDMI 421 (523)
T ss_pred --------------CCCCCCCcceEEEECCchhhhhcCCHHHHHHHhhCCCeeccceEEEcC----CceEEEecccccEE
Confidence 134568999999975 44555 299999999963 56899999999999
Q ss_pred cccccccCHHHHHHHHHH
Q 007728 438 SIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 438 ~~~Geki~e~~v~~av~~ 455 (591)
++.|+++++.+||.++.+
T Consensus 422 ~~~G~~i~~~~iE~~l~~ 439 (523)
T PRK08316 422 KTGGENVASREVEEALYT 439 (523)
T ss_pred EeCCeEECHHHHHHHHHh
Confidence 999999999999999966
No 54
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.34 E-value=1.8e-10 Score=129.01 Aligned_cols=129 Identities=15% Similarity=0.147 Sum_probs=91.1
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccc-cccCCCCC---CCCCCceeecCCCeEEEEEECCCCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFF-GLNLNPMC---KTSEASYTIMPNMAYFEFLLHDPGSPAS 375 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~-~i~~~~~~---~~~~~~~~l~~~~~~~EFip~~~~~~~~ 375 (591)
++++.+||. ...++.+.+.+++++++ +.||+||+.. +....... .+...+.. . .....++++.+.
T Consensus 292 lr~i~~gg~~~~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~-~-~~~~~~i~d~~~----- 363 (542)
T PRK07786 292 LRVLSWGAAPASDTLLRQMAATFPEAQIL-AAFGQTEMSPVTCMLLGEDAIRKLGSVGKV-I-PTVAARVVDENM----- 363 (542)
T ss_pred eEEEEECCCCCCHHHHHHHHHHcCCCeEE-eeecccccccceEecCcccccccCCCcccc-C-CCceEEEECCCC-----
Confidence 788888884 45678888888889999 9999999742 22111100 00011111 1 234556665321
Q ss_pred CCCCCCCccccccccCCCceEEEEEcc---ccceec-------------cccCCEEEEccccCCCCeEEEeeecCceecc
Q 007728 376 TSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR-------------YKVGDILRVAGFHNASPHFHFVRRKDALLSI 439 (591)
Q Consensus 376 ~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 439 (591)
.++.+|+.|||++.. ..|+|+ |+|||+++... ...+.|+||.++++++
T Consensus 364 ------------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f~~~~~~TGDl~~~~~----~g~~~i~GR~~d~i~~ 427 (542)
T PRK07786 364 ------------NDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAFAGGWFHSGDLVRQDE----EGYVWVVDRKKDMIIS 427 (542)
T ss_pred ------------CCCcCCCceEEEEEChhhhhhhcCCHHHHHHHhhCCcccccceEEEcC----CceEEEEecccceEEe
Confidence 145678999999964 556664 99999999963 5689999999999999
Q ss_pred cccccCHHHHHHHHHH
Q 007728 440 DYDKTDEADLQKAVEN 455 (591)
Q Consensus 440 ~Geki~e~~v~~av~~ 455 (591)
+|+++.+.+||.+|.+
T Consensus 428 ~G~~v~~~eiE~~l~~ 443 (542)
T PRK07786 428 GGENIYCAEVENVLAS 443 (542)
T ss_pred CCEEECHHHHHHHHHh
Confidence 9999999999999976
No 55
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=99.33 E-value=7.1e-11 Score=131.80 Aligned_cols=129 Identities=12% Similarity=0.157 Sum_probs=88.5
Q ss_pred eeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCCCC----CCCceeecCCCeEEEEEECCCCCCC
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCKT----SEASYTIMPNMAYFEFLLHDPGSPA 374 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~----~~~~~~l~~~~~~~EFip~~~~~~~ 374 (591)
.++++++||. ....+.+++.+ |++++ +.||+||+.+.... ...+. ...+..+.+ ....++++.+ +
T Consensus 300 ~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~-~~~~~~~~~~~~G~~~~~-~~~v~i~d~~--g-- 371 (527)
T TIGR02275 300 SLKLLQVGGAKFSEAAARRVPAVF-GCQLQ-QVFGMAEGLVNYTR-LDDPAEIIFTTQGRPMSP-DDEVRVVDDH--G-- 371 (527)
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHh-CCeEE-eeeccCccCccccC-CCCccccccccCCCCCCC-CceEEEECCC--C--
Confidence 3788888885 45667777778 78998 99999997543211 10000 011222211 1233444322 1
Q ss_pred CCCCCCCCccccccccCCCceEEEEEcc---ccceec--------------cccCCEEEEccccCCCCeEEEeeecCcee
Q 007728 375 STSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR--------------YKVGDILRVAGFHNASPHFHFVRRKDALL 437 (591)
Q Consensus 375 ~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l 437 (591)
..+.+|+.+||+|+. ..|+|. |+|||+++++. ..++.|+||.+|++
T Consensus 372 -------------~~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~----~g~l~~~gR~~d~i 434 (527)
T TIGR02275 372 -------------NPVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTP----EGYIVVVGRAKDQI 434 (527)
T ss_pred -------------CCCCCCCceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCceEEEcC----CccEEEEeccccee
Confidence 134679999999963 456652 99999999963 66789999999999
Q ss_pred cccccccCHHHHHHHHHH
Q 007728 438 SIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 438 ~~~Geki~e~~v~~av~~ 455 (591)
+++|+++.+.+||++|.+
T Consensus 435 ~~~G~~v~~~eiE~~l~~ 452 (527)
T TIGR02275 435 NRGGEKIAAEEIENLLLA 452 (527)
T ss_pred ecCCEEECHHHHHHHHHh
Confidence 999999999999999976
No 56
>PLN02614 long-chain acyl-CoA synthetase
Probab=99.33 E-value=1.5e-11 Score=141.62 Aligned_cols=132 Identities=12% Similarity=0.150 Sum_probs=87.4
Q ss_pred eeEEEecCh--HHHHHHHHHHhCCCCeeccccccccccccccCC-CCC--CCCCCceeecCCCeEEEEEECCCCCCCCCC
Q 007728 303 LDAVATGSM--AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLN-PMC--KTSEASYTIMPNMAYFEFLLHDPGSPASTS 377 (591)
Q Consensus 303 l~~~~~g~~--~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~-~~~--~~~~~~~~l~~~~~~~EFip~~~~~~~~~~ 377 (591)
++.+++||+ .....++.+.+++++++ ++||+||+...+... +.. .+...|. ..|+. -.-++++++.+.
T Consensus 388 lr~~~~Gga~l~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~-p~pg~-evki~d~~~~~~---- 460 (666)
T PLN02614 388 VRIILSGAAPLASHVESFLRVVACCHVL-QGYGLTESCAGTFVSLPDELDMLGTVGP-PVPNV-DIRLESVPEMEY---- 460 (666)
T ss_pred EEEEEEcCCCCCHHHHHHHHHhcCCCEE-eeCchHhhhhheeeeccccCCcCCcccC-cCCce-EEEEeeecccCc----
Confidence 788888885 33345555667679998 999999974322111 110 0111222 12221 122333222110
Q ss_pred CCCCCccccccccCCCceEEEEEcc---ccceec-------------cccCCEEEEccccCCCCeEEEeeecCceecc-c
Q 007728 378 DFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR-------------YKVGDILRVAGFHNASPHFHFVRRKDALLSI-D 440 (591)
Q Consensus 378 ~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~-~ 440 (591)
.++.+|+.|||+|.. ..|||+ |+|||+++++ ....|.|+||.+|+|++ .
T Consensus 461 ----------~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d----~dG~l~i~gR~kd~ik~~~ 526 (666)
T PLN02614 461 ----------DALASTPRGEICIRGKTLFSGYYKREDLTKEVLIDGWLHTGDVGEWQ----PNGSMKIIDRKKNIFKLSQ 526 (666)
T ss_pred ----------ccCCCCCCceEEEcCCcccccccCCHHHhhhhhccCCcccceEEEEc----CCCCEEEEEcchhceecCC
Confidence 135679999999953 678885 9999999997 36689999999999986 6
Q ss_pred ccccCHHHHHHHHHH
Q 007728 441 YDKTDEADLQKAVEN 455 (591)
Q Consensus 441 Geki~e~~v~~av~~ 455 (591)
||+|++.+||+++..
T Consensus 527 G~~V~p~eIE~~l~~ 541 (666)
T PLN02614 527 GEYVAVENIENIYGE 541 (666)
T ss_pred CeeecHHHHHHHHhc
Confidence 999999999999975
No 57
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=99.33 E-value=1.4e-10 Score=129.99 Aligned_cols=130 Identities=18% Similarity=0.262 Sum_probs=88.9
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeecccccccccc-ccccCC-CCC-----CCCCCceeecCCCeEEEEEECCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECF-FGLNLN-PMC-----KTSEASYTIMPNMAYFEFLLHDPGS 372 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~-~~i~~~-~~~-----~~~~~~~~l~~~~~~~EFip~~~~~ 372 (591)
++.+++||. ...++++++.++|++++ +.||+||+. +++... +.. .+...+.. .|+ .=.++++.+..
T Consensus 305 l~~i~~~g~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~-~~~-~~v~i~d~~~~- 380 (546)
T PLN02330 305 LQAIMTAAAPLAPELLTAFEAKFPGVQVQ-EAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFI-LPN-LEVKFIDPDTG- 380 (546)
T ss_pred eeeEEEcCCcCCHHHHHHHHHHcCCCeEE-ecccccccccceecCCCccccccccccCccccc-cCC-cEEEEEeCCCC-
Confidence 677777774 45677888888889999 999999973 322110 100 00011211 122 12455553322
Q ss_pred CCCCCCCCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEccccCCCCeEEEeeecCc
Q 007728 373 PASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY--------------RYKVGDILRVAGFHNASPHFHFVRRKDA 435 (591)
Q Consensus 373 ~~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~ 435 (591)
..+.+|+.|||+|+. ..|+| -|+|||++++.. ...+.|.||.++
T Consensus 381 ---------------~~~p~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~----dG~l~~~GR~~d 441 (546)
T PLN02330 381 ---------------RSLPKNTPGELCVRSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDD----DGDIFIVDRIKE 441 (546)
T ss_pred ---------------ccCCCCCceEEEEecchhhhhhccCccchhhhccCCCceecccEEEEeC----CCcEEEEechHH
Confidence 235679999999963 44554 199999999863 457899999999
Q ss_pred eecccccccCHHHHHHHHHH
Q 007728 436 LLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 436 ~l~~~Geki~e~~v~~av~~ 455 (591)
++++.|+++++.+||.+|..
T Consensus 442 ~i~~~G~~v~~~~iE~~l~~ 461 (546)
T PLN02330 442 LIKYKGFQVAPAELEAILLT 461 (546)
T ss_pred hhhcCCEEECHHHHHHHHHh
Confidence 99999999999999999976
No 58
>PRK12583 acyl-CoA synthetase; Provisional
Probab=99.33 E-value=4.9e-10 Score=125.56 Aligned_cols=130 Identities=11% Similarity=0.066 Sum_probs=88.7
Q ss_pred eeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCCCC-----CCCceeecCCCeEEEEEECCCCCC
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCKT-----SEASYTIMPNMAYFEFLLHDPGSP 373 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~-----~~~~~~l~~~~~~~EFip~~~~~~ 373 (591)
.|+.+++||. ....+.+.+.+++.++. +.||+||+.........++. ...+. ..+ ...+++++++ .
T Consensus 318 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~-p~~-~~~~~i~d~~-~-- 391 (558)
T PRK12583 318 SLRTGIMAGAPCPIEVMRRVMDEMHMAEVQ-IAYGMTETSPVSLQTTAADDLERRVETVGR-TQP-HLEVKVVDPD-G-- 391 (558)
T ss_pred hheEEEecCCCCCHHHHHHHHHHcCCccee-ccccccccccceeccCcccccccccCCCCc-cCC-CCeEEEECCC-C--
Confidence 3788777774 45567777777666787 99999997432211111110 01121 112 2345665533 1
Q ss_pred CCCCCCCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEccccCCCCeEEEeeecCce
Q 007728 374 ASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY--------------RYKVGDILRVAGFHNASPHFHFVRRKDAL 436 (591)
Q Consensus 374 ~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~ 436 (591)
.++..|+.|||+|+. ..|+| .|+|||+++++. ...+.|.||.+++
T Consensus 392 --------------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~----dg~l~i~GR~~~~ 453 (558)
T PRK12583 392 --------------ATVPRGEIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDE----QGYVRIVGRSKDM 453 (558)
T ss_pred --------------CCCCCCCeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECC----CccEEEEecccce
Confidence 245789999999965 34554 289999999963 5689999999999
Q ss_pred ecccccccCHHHHHHHHHH
Q 007728 437 LSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 437 l~~~Geki~e~~v~~av~~ 455 (591)
++++|+++++.+||++|.+
T Consensus 454 i~~~G~~v~~~~IE~~l~~ 472 (558)
T PRK12583 454 IIRGGENIYPREIEEFLFT 472 (558)
T ss_pred eEECCEEeCHHHHHHHHHh
Confidence 9999999999999999965
No 59
>PRK12467 peptide synthase; Provisional
Probab=99.32 E-value=3.7e-11 Score=161.11 Aligned_cols=129 Identities=16% Similarity=0.154 Sum_probs=88.8
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCCCCC-------CCceeecCCCeEEEEEECCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCKTS-------EASYTIMPNMAYFEFLLHDPGS 372 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~-------~~~~~l~~~~~~~EFip~~~~~ 372 (591)
++.+++||. ....+++.+.++++.++ +.||+||+.+.+......... ..|. ..++. ++.-.++.+
T Consensus 3353 lr~~~~gGe~~~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~-p~~~~---~~~v~d~~~ 3427 (3956)
T PRK12467 3353 LDIYVFGGEAVPPAAFEQVKRKLKPRGLT-NGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGR-PVAGR---SIYVLDGQL 3427 (3956)
T ss_pred ceEEEEecCCCCHHHHHHHHHhCCCCEEE-eCcccchhEeeeEEEecccccccCCCCCCCcc-ccCCC---EEEEECCCC
Confidence 788888884 34556666677788898 999999985533211110000 0111 11222 222223221
Q ss_pred CCCCCCCCCCccccccccCCCceEEEEEcc---ccceec---------------------cccCCEEEEccccCCCCeEE
Q 007728 373 PASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR---------------------YKVGDILRVAGFHNASPHFH 428 (591)
Q Consensus 373 ~~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR---------------------Yr~GDvV~v~gf~~~~P~i~ 428 (591)
..|.+|+.|||.|.. ..|||. |||||++++. ....|+
T Consensus 3428 ---------------~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~----~dG~l~ 3488 (3956)
T PRK12467 3428 ---------------NPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYR----ADGVIE 3488 (3956)
T ss_pred ---------------CCCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhheec----CCCcEE
Confidence 245789999999963 456652 9999999996 467999
Q ss_pred EeeecCceecccccccCHHHHHHHHHH
Q 007728 429 FVRRKDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 429 f~gR~~~~l~~~Geki~e~~v~~av~~ 455 (591)
|+||.|++++++|.+|...|||++|.+
T Consensus 3489 ~~GR~d~~iki~G~rIe~~EIE~~l~~ 3515 (3956)
T PRK12467 3489 YLGRIDHQVKIRGFRIELGEIEARLLQ 3515 (3956)
T ss_pred EeccccceEeeceEeecHHHHHHHHhh
Confidence 999999999999999999999999976
No 60
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.32 E-value=2.3e-10 Score=128.64 Aligned_cols=129 Identities=16% Similarity=0.170 Sum_probs=88.9
Q ss_pred eeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCCC---CCCCceeecCCCeEEEEEECCCCCCCC
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCK---TSEASYTIMPNMAYFEFLLHDPGSPAS 375 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~---~~~~~~~l~~~~~~~EFip~~~~~~~~ 375 (591)
.++++++||. ....+.+++.+ |++++ +.||+||+...+....... +...+.. . .+.-.++++.+.
T Consensus 326 ~lr~~~~gg~~~~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~-~-~~~~~~i~~~~~----- 396 (560)
T PRK08974 326 SLKLSVGGGMAVQQAVAERWVKLT-GQYLL-EGYGLTECSPLVSVNPYDLDYYSGSIGLP-V-PSTEIKLVDDDG----- 396 (560)
T ss_pred ceeEEEecCccCCHHHHHHHHHHh-CCcEE-eeecccccCceeeccCCCCcccCCccccC-c-CCCEEEEECCCC-----
Confidence 3788888885 34456677767 79999 9999999743321111100 1111221 1 223455554321
Q ss_pred CCCCCCCccccccccCCCceEEEEEcc---ccceec-------------cccCCEEEEccccCCCCeEEEeeecCceecc
Q 007728 376 TSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR-------------YKVGDILRVAGFHNASPHFHFVRRKDALLSI 439 (591)
Q Consensus 376 ~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 439 (591)
.++..|+.|||+|+. ..|+|. |+|||+++.+. ...+.|+||.+|++++
T Consensus 397 ------------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~i~GR~~d~i~~ 460 (560)
T PRK08974 397 ------------NEVPPGEPGELWVKGPQVMLGYWQRPEATDEVIKDGWLATGDIAVMDE----EGFLRIVDRKKDMILV 460 (560)
T ss_pred ------------CCCCCCCceEEEEecCCcchhhcCChhhhhhhhhcCCcccCCEEEEcC----CceEEEEecccceEEe
Confidence 245679999999974 455553 99999999863 5679999999999999
Q ss_pred cccccCHHHHHHHHHH
Q 007728 440 DYDKTDEADLQKAVEN 455 (591)
Q Consensus 440 ~Geki~e~~v~~av~~ 455 (591)
.|+++++.+||.+|.+
T Consensus 461 ~G~~i~~~~IE~~l~~ 476 (560)
T PRK08974 461 SGFNVYPNEIEDVVML 476 (560)
T ss_pred CCEEECHHHHHHHHHh
Confidence 9999999999999976
No 61
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=99.32 E-value=2.8e-10 Score=126.03 Aligned_cols=130 Identities=17% Similarity=0.227 Sum_probs=87.5
Q ss_pred eeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCC---CCCCCceeecCCCeEEEEEECCCCCCCC
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMC---KTSEASYTIMPNMAYFEFLLHDPGSPAS 375 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~---~~~~~~~~l~~~~~~~EFip~~~~~~~~ 375 (591)
.++.+.+||. ....+.+++.+++++++ +.||+||+.......+.. .+...+- ..+ .....+++.+ +
T Consensus 275 ~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~-~~~-~~~~~i~~~~--~--- 346 (515)
T TIGR03098 275 SLRYLTNSGGAMPRATLSRLRSFLPNARLF-LMYGLTEAFRSTYLPPEEVDRRPDSIGK-AIP-NAEVLVLRED--G--- 346 (515)
T ss_pred ceEEEEecCCcCCHHHHHHHHHHCCCCeEe-eeeccccccceEecccccccCCCCCcce-ecC-CCEEEEECCC--C---
Confidence 3788888774 45667788888788888 999999974322211110 0111111 112 2234444422 1
Q ss_pred CCCCCCCccccccccCCCceEEEEEcc---cccee-------------------------ccccCCEEEEccccCCCCeE
Q 007728 376 TSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY-------------------------RYKVGDILRVAGFHNASPHF 427 (591)
Q Consensus 376 ~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly-------------------------RYr~GDvV~v~gf~~~~P~i 427 (591)
..+..|+.|||++.+ ..|+| .|+|||++++.. ...+
T Consensus 347 ------------~~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l 410 (515)
T TIGR03098 347 ------------SECAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDE----EGFL 410 (515)
T ss_pred ------------CCCCCCCceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcC----CceE
Confidence 134568889999964 34444 278999999853 4578
Q ss_pred EEeeecCceecccccccCHHHHHHHHHH
Q 007728 428 HFVRRKDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 428 ~f~gR~~~~l~~~Geki~e~~v~~av~~ 455 (591)
.|.||.+|++++.|+++++.+||+++..
T Consensus 411 ~~~GR~~d~i~~~G~~v~~~eiE~~l~~ 438 (515)
T TIGR03098 411 YFVGRRDEMIKTSGYRVSPTEVEEVAYA 438 (515)
T ss_pred EEEeccccceecCCEEeCHHHHHHHHhc
Confidence 9999999999999999999999999975
No 62
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.32 E-value=8.7e-10 Score=122.35 Aligned_cols=129 Identities=14% Similarity=0.047 Sum_probs=88.5
Q ss_pred eeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCC---CCCCCCceeecCCCeEEEEEECCCCCCCC
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPM---CKTSEASYTIMPNMAYFEFLLHDPGSPAS 375 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~---~~~~~~~~~l~~~~~~~EFip~~~~~~~~ 375 (591)
.++.+++||. ...++.+++.+ +++++ +.||+||+....-.... ..+...+. ..++ .-+++++.+ +
T Consensus 272 ~l~~v~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d~~--~--- 342 (509)
T PRK12406 272 SLRHVIHAAAPCPADVKRAMIEWW-GPVIY-EYYGSTESGAVTFATSEDALSHPGTVGK-AAPG-AELRFVDED--G--- 342 (509)
T ss_pred ceeEEEEcCCCCCHHHHHHHHHHc-CCcEE-eeccccccCceEecCcccccccCCCcCc-cCCC-cEEEEECCC--C---
Confidence 4788888874 46677888877 78888 99999997432111110 11111222 1222 234555422 1
Q ss_pred CCCCCCCccccccccCCCceEEEEEccc----cceec-------------cccCCEEEEccccCCCCeEEEeeecCceec
Q 007728 376 TSDFQPPKLVDLVDVEVGKEYEPIITNY----TGVYR-------------YKVGDILRVAGFHNASPHFHFVRRKDALLS 438 (591)
Q Consensus 376 ~~~~~~~~~~~~~ev~~G~~yelvvTt~----~GlyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 438 (591)
..+..|+.+||+++.. .|++. |+|||+++++. ...+.|.||.+|+++
T Consensus 343 ------------~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~GR~~d~ik 406 (509)
T PRK12406 343 ------------RPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEIDRGGFITSGDVGYLDA----DGYLFLCDRKRDMVI 406 (509)
T ss_pred ------------CCCCCCCceEEEEECCccccccccCCchhcccccCCCCeEEccEEEEcC----CceEEEeecccceEE
Confidence 2456799999999752 25552 88999999963 567899999999999
Q ss_pred ccccccCHHHHHHHHHH
Q 007728 439 IDYDKTDEADLQKAVEN 455 (591)
Q Consensus 439 ~~Geki~e~~v~~av~~ 455 (591)
++|+++++.+||.+|.+
T Consensus 407 ~~G~~v~~~~IE~~l~~ 423 (509)
T PRK12406 407 SGGVNIYPAEIEAVLHA 423 (509)
T ss_pred ECCEEECHHHHHHHHHh
Confidence 99999999999999975
No 63
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.31 E-value=5.2e-11 Score=144.72 Aligned_cols=130 Identities=15% Similarity=0.163 Sum_probs=90.5
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccc-c-ccCCCC----------CCCCCCceeecCCCeEEEEEE
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFF-G-LNLNPM----------CKTSEASYTIMPNMAYFEFLL 367 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~-~-i~~~~~----------~~~~~~~~~l~~~~~~~EFip 367 (591)
++.+.+||. ...++.+++.+ |++++ +.||+||+.. . .+.... +.+...+. ..| +.-.+.++
T Consensus 900 lr~~~~gg~~~~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~-p~~-~~~v~i~d 975 (1146)
T PRK08633 900 LRLVVAGAEKLKPEVADAFEEKF-GIRIL-EGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGM-PLP-GVAVRIVD 975 (1146)
T ss_pred eeeEEEcCCcCCHHHHHHHHHHh-CCCee-cccccccCcceEEEecCcccccccccccCCCCCCccc-cCC-CCEEEEEc
Confidence 788888885 45667788878 79998 9999999632 2 211000 00111111 112 22345554
Q ss_pred CCCCCCCCCCCCCCCccccccccCCCceEEEEEcc---cccee-----------------ccccCCEEEEccccCCCCeE
Q 007728 368 HDPGSPASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY-----------------RYKVGDILRVAGFHNASPHF 427 (591)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly-----------------RYr~GDvV~v~gf~~~~P~i 427 (591)
+++. .++.+|+.|||+|+. ..|+| .|+|||+++++. ...+
T Consensus 976 ~~~~----------------~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~----~g~l 1035 (1146)
T PRK08633 976 PETF----------------EELPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDE----DGFL 1035 (1146)
T ss_pred CCCC----------------ccCCCCCceEEEEcCCCccccccCCccchHHHhhcCCCCCeEECCCEEEEcC----CceE
Confidence 3322 246789999999964 45555 299999999973 6789
Q ss_pred EEeeecCceecccccccCHHHHHHHHHHH
Q 007728 428 HFVRRKDALLSIDYDKTDEADLQKAVENA 456 (591)
Q Consensus 428 ~f~gR~~~~l~~~Geki~e~~v~~av~~a 456 (591)
.|+||.+|+++++|+++++.+||+++.+.
T Consensus 1036 ~~~gR~~d~i~~~G~~v~~~eiE~~l~~~ 1064 (1146)
T PRK08633 1036 TITDRYSRFAKIGGEMVPLGAVEEELAKA 1064 (1146)
T ss_pred EEEecccchhhhCcEEECHHHHHHHHHhc
Confidence 99999999999999999999999999873
No 64
>PRK08315 AMP-binding domain protein; Validated
Probab=99.31 E-value=4.3e-10 Score=126.19 Aligned_cols=131 Identities=10% Similarity=0.074 Sum_probs=87.6
Q ss_pred eeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCCC-----CCCCceeecCCCeEEEEEECCCCCC
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCK-----TSEASYTIMPNMAYFEFLLHDPGSP 373 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~-----~~~~~~~l~~~~~~~EFip~~~~~~ 373 (591)
.|++++.||. ....+.+.+.++..+++ +.||+||+........... +...+.. .+ ..-++.++.++.
T Consensus 316 ~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p-~~-~~~v~i~d~~~~-- 390 (559)
T PRK08315 316 SLRTGIMAGSPCPIEVMKRVIDKMHMSEVT-IAYGMTETSPVSTQTRTDDPLEKRVTTVGRA-LP-HLEVKIVDPETG-- 390 (559)
T ss_pred hhheeEecCCCCCHHHHHHHHHHcCCccee-EEEcccccccceeecCcccchhhccCCCCcc-CC-CcEEEEEcCccC--
Confidence 3677777774 34566777778556688 9999999743221111000 0111221 12 234555553322
Q ss_pred CCCCCCCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEccccCCCCeEEEeeecCce
Q 007728 374 ASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY--------------RYKVGDILRVAGFHNASPHFHFVRRKDAL 436 (591)
Q Consensus 374 ~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~ 436 (591)
..+..|+.|||+|.. ..|+| .|+|||+++... ...+.|+||.+++
T Consensus 391 --------------~~~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----dg~~~~~GR~d~~ 452 (559)
T PRK08315 391 --------------ETVPRGEQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDE----EGYVNIVGRIKDM 452 (559)
T ss_pred --------------CcCCCCCceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcC----CceEEEEeeccce
Confidence 134679999999964 34444 399999999863 5689999999999
Q ss_pred ecccccccCHHHHHHHHHH
Q 007728 437 LSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 437 l~~~Geki~e~~v~~av~~ 455 (591)
+++.|+++...+||+++.+
T Consensus 453 i~~~G~~v~~~eIE~~l~~ 471 (559)
T PRK08315 453 IIRGGENIYPREIEEFLYT 471 (559)
T ss_pred EEECCEEEcHHHHHHHHHh
Confidence 9999999999999999976
No 65
>PRK07867 acyl-CoA synthetase; Validated
Probab=99.31 E-value=9.4e-11 Score=131.26 Aligned_cols=127 Identities=15% Similarity=0.145 Sum_probs=83.6
Q ss_pred eeEEEecC-hHHHHHHHHHHhCCCCeeccccccccccccccCCCCCCCCCCceeecCCCeEEEEEECCCCCCCCCCCCCC
Q 007728 303 LDAVATGS-MAQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCKTSEASYTIMPNMAYFEFLLHDPGSPASTSDFQP 381 (591)
Q Consensus 303 l~~~~~g~-~~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~ 381 (591)
++++.+|. ..+-..++.+.+ |++++ +.||+||+.+.+...+..++...+.. .++ ++++..+...
T Consensus 269 lr~~~gg~~~~~~~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~g~~-~~~---~~i~~~~~~~--------- 333 (529)
T PRK07867 269 LRIVYGNEGAPGDIARFARRF-GCVVV-DGFGSTEGGVAITRTPDTPPGALGPL-PPG---VAIVDPDTGT--------- 333 (529)
T ss_pred eEEEecCCCChHHHHHHHHHh-CCcEE-EeecccccccccccCCCCCCCCcCCC-CCC---EEEEECCCCC---------
Confidence 56554433 234456666777 78998 99999997543321111111111211 122 6676543221
Q ss_pred CccccccccCCCc------------eEEEEE-cc---cccee-------------ccccCCEEEEccccCCCCeEEEeee
Q 007728 382 PKLVDLVDVEVGK------------EYEPII-TN---YTGVY-------------RYKVGDILRVAGFHNASPHFHFVRR 432 (591)
Q Consensus 382 ~~~~~~~ev~~G~------------~yelvv-Tt---~~Gly-------------RYr~GDvV~v~gf~~~~P~i~f~gR 432 (591)
++.+|+ .|||++ .. ..|+| +|+|||+++++. ...+.|+||
T Consensus 334 -------~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~~~GR 402 (529)
T PRK07867 334 -------ECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERMRGGVYWSGDLAYRDA----DGYAYFAGR 402 (529)
T ss_pred -------CCCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhhcCCeEeeccEEEEeC----CCcEEEecc
Confidence 122333 799998 32 46666 699999999963 568999999
Q ss_pred cCceecccccccCHHHHHHHHHH
Q 007728 433 KDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 433 ~~~~l~~~Geki~e~~v~~av~~ 455 (591)
.+|+++++|+|+.+.+||.+|.+
T Consensus 403 ~~d~i~~~G~~v~p~eIE~~l~~ 425 (529)
T PRK07867 403 LGDWMRVDGENLGTAPIERILLR 425 (529)
T ss_pred ccCeEEECCEEeCHHHHHHHHHh
Confidence 99999999999999999999976
No 66
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=99.30 E-value=8e-11 Score=132.29 Aligned_cols=130 Identities=17% Similarity=0.165 Sum_probs=88.9
Q ss_pred ceeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCC---CCCCCceeecCCCeEEEEEECCCCCCC
Q 007728 301 KYLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMC---KTSEASYTIMPNMAYFEFLLHDPGSPA 374 (591)
Q Consensus 301 ~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~---~~~~~~~~l~~~~~~~EFip~~~~~~~ 374 (591)
+.++.+..||. ...++++++.+ |++++ +.||+||+...+...+.. .+...+..+ .+.-.++++.+ +
T Consensus 327 ~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~p~--~g~~v~i~d~~--~-- 398 (557)
T PRK07059 327 SKLIVANGGGMAVQRPVAERWLEMT-GCPIT-EGYGLSETSPVATCNPVDATEFSGTIGLPL--PSTEVSIRDDD--G-- 398 (557)
T ss_pred hhheEEEeccccCCHHHHHHHHHHh-CCCee-eccccccccchhhcCCCCCCCcCCcccCcc--CCcEEEEECCC--C--
Confidence 34788888884 35566777777 79999 999999974432211111 011122211 23345555422 1
Q ss_pred CCCCCCCCccccccccCCCceEEEEEcc---ccceec--------------cccCCEEEEccccCCCCeEEEeeecCcee
Q 007728 375 STSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR--------------YKVGDILRVAGFHNASPHFHFVRRKDALL 437 (591)
Q Consensus 375 ~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l 437 (591)
..+.+|+.|||+|++ ..|+|. |+|||+++... ...+.|+||.++++
T Consensus 399 -------------~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~~~i 461 (557)
T PRK07059 399 -------------NDLPLGEPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDE----RGYTKIVDRKKDMI 461 (557)
T ss_pred -------------CCCCCCCceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcC----CCcEEEecccccce
Confidence 135679999999975 334442 89999999863 56899999999999
Q ss_pred cccccccCHHHHHHHHHH
Q 007728 438 SIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 438 ~~~Geki~e~~v~~av~~ 455 (591)
++.|+++++.+||++|.+
T Consensus 462 ~~~G~~i~p~~iE~~l~~ 479 (557)
T PRK07059 462 LVSGFNVYPNEIEEVVAS 479 (557)
T ss_pred EECCEEEcHHHHHHHHHh
Confidence 999999999999999976
No 67
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.30 E-value=4e-11 Score=134.87 Aligned_cols=131 Identities=12% Similarity=0.094 Sum_probs=89.9
Q ss_pred eeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCC---CCCCCCCceeecCCCeEEEEEECCCCCCCC
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNP---MCKTSEASYTIMPNMAYFEFLLHDPGSPAS 375 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~---~~~~~~~~~~l~~~~~~~EFip~~~~~~~~ 375 (591)
.++.+++||. ....+.+++.+ |++++ +.||+||+........ ...+... .+..++. -.++++++..
T Consensus 324 ~lr~v~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~-G~~~~~~-~~~i~~~~~~---- 395 (563)
T PRK06710 324 SIRACISGSAPLPVEVQEKFETVT-GGKLV-EGYGLTESSPVTHSNFLWEKRVPGSI-GVPWPDT-EAMIMSLETG---- 395 (563)
T ss_pred hhhheeeCCCcCCHHHHHHHHHhh-CCCEe-cccccccCccccccCcccccccCCcc-CCCCCCC-eEEEEECCCC----
Confidence 3677788774 35566777777 78888 9999999743211100 0011111 1223333 3455554332
Q ss_pred CCCCCCCccccccccCCCceEEEEEcc---ccceec-------------cccCCEEEEccccCCCCeEEEeeecCceecc
Q 007728 376 TSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR-------------YKVGDILRVAGFHNASPHFHFVRRKDALLSI 439 (591)
Q Consensus 376 ~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 439 (591)
..+..|+.|||+++. ..|+|. |+|||++..+. ...+.++||.+|++++
T Consensus 396 ------------~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~~~~~GR~dd~i~~ 459 (563)
T PRK06710 396 ------------EALPPGEIGEIVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDVGYMDE----DGFFYVKDRKKDMIVA 459 (563)
T ss_pred ------------ccCCCCCceEEEEecCccchhhhCChHHHhhhcccCcccccceEEEcC----CCcEEEeeccccEEEE
Confidence 245679999999975 456664 99999999863 5689999999999999
Q ss_pred cccccCHHHHHHHHHHH
Q 007728 440 DYDKTDEADLQKAVENA 456 (591)
Q Consensus 440 ~Geki~e~~v~~av~~a 456 (591)
+|+|+++.+||.+|...
T Consensus 460 ~G~~v~p~eiE~~l~~~ 476 (563)
T PRK06710 460 SGFNVYPREVEEVLYEH 476 (563)
T ss_pred CCEEECHHHHHHHHHhC
Confidence 99999999999999763
No 68
>PRK07470 acyl-CoA synthetase; Validated
Probab=99.30 E-value=6.5e-11 Score=131.96 Aligned_cols=128 Identities=9% Similarity=0.105 Sum_probs=85.5
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCC----------CCCCCCceeecCCCeEEEEEECC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPM----------CKTSEASYTIMPNMAYFEFLLHD 369 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~----------~~~~~~~~~l~~~~~~~EFip~~ 369 (591)
++.+++||. ....+++.+.+ |.++. +.||+||+...+...+. ......+.. .+ ..-+++++.+
T Consensus 282 lr~~~~gG~~l~~~~~~~~~~~~-g~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~-~~-g~~~~i~d~~ 357 (528)
T PRK07470 282 LRYVIYAGAPMYRADQKRALAKL-GKVLV-QYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFE-RT-GMEVQIQDDE 357 (528)
T ss_pred eEEEEEcCCCCCHHHHHHHHHHh-CcHHH-HhCCCcccCCceeecchhhccccccccceeeccCcc-cC-CcEEEEECCC
Confidence 788888874 34556666667 67787 99999996432211100 000001111 11 1233444322
Q ss_pred CCCCCCCCCCCCCccccccccCCCceEEEEEcc---ccceec-------------cccCCEEEEccccCCCCeEEEeeec
Q 007728 370 PGSPASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR-------------YKVGDILRVAGFHNASPHFHFVRRK 433 (591)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~ 433 (591)
+ .++..|+.|||+|+. ..|+|. |+|||+++++. ...+.+.||.
T Consensus 358 --~---------------~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~TGDl~~~~~----~g~l~~~GR~ 416 (528)
T PRK07470 358 --G---------------RELPPGETGEICVIGPAVFAGYYNNPEANAKAFRDGWFRTGDLGHLDA----RGFLYITGRA 416 (528)
T ss_pred --C---------------CCCCCCCceEEEEeCCccchhhcCCHHHHHhhhcCCcEecceeEEEcc----CCeEEEeCCc
Confidence 1 245679999999964 456653 99999999863 5689999999
Q ss_pred CceecccccccCHHHHHHHHHH
Q 007728 434 DALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 434 ~~~l~~~Geki~e~~v~~av~~ 455 (591)
++++++.|+++.+.+||.+|..
T Consensus 417 dd~i~~~G~~v~~~~IE~~l~~ 438 (528)
T PRK07470 417 SDMYISGGSNVYPREIEEKLLT 438 (528)
T ss_pred cceEEeCCEEECHHHHHHHHHh
Confidence 9999999999999999999975
No 69
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.30 E-value=5.6e-10 Score=127.67 Aligned_cols=63 Identities=21% Similarity=0.188 Sum_probs=53.8
Q ss_pred ccCCCceEEEEEcc---cccee-------------------------------ccccCCEEEEccccCCCCeEEEeeecC
Q 007728 389 DVEVGKEYEPIITN---YTGVY-------------------------------RYKVGDILRVAGFHNASPHFHFVRRKD 434 (591)
Q Consensus 389 ev~~G~~yelvvTt---~~Gly-------------------------------RYr~GDvV~v~gf~~~~P~i~f~gR~~ 434 (591)
++..|+.|||+|.. ..||| -|||||++++. ...+.|+||.+
T Consensus 412 ~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-----dG~l~i~GR~~ 486 (631)
T PRK07769 412 ELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-----DGELYITGRVK 486 (631)
T ss_pred CCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-----CCEEEEEcccc
Confidence 56789999999964 45555 28999999884 46899999999
Q ss_pred ceecccccccCHHHHHHHHHHH
Q 007728 435 ALLSIDYDKTDEADLQKAVENA 456 (591)
Q Consensus 435 ~~l~~~Geki~e~~v~~av~~a 456 (591)
|+|+++|++|++.+||.+|...
T Consensus 487 d~Ik~~G~~V~p~eIE~~l~~~ 508 (631)
T PRK07769 487 DLVIIDGRNHYPQDLEYTAQEA 508 (631)
T ss_pred cEEEECCeeeCHHHHHHHHHhc
Confidence 9999999999999999999863
No 70
>PLN03052 acetate--CoA ligase; Provisional
Probab=99.30 E-value=6.6e-10 Score=129.32 Aligned_cols=132 Identities=12% Similarity=0.023 Sum_probs=80.8
Q ss_pred CceeeEEEecChH---HHHHHHHHHhCCCCeeccccccccccccccC-CCCCC--CCCCceeecCCCeEEEEEECCCCCC
Q 007728 300 TKYLDAVATGSMA---QYIHLLDYYSGSLPIASMLYSSSECFFGLNL-NPMCK--TSEASYTIMPNMAYFEFLLHDPGSP 373 (591)
Q Consensus 300 l~~l~~~~~g~~~---~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~-~~~~~--~~~~~~~l~~~~~~~EFip~~~~~~ 373 (591)
++.|+.+.+||.. .....+.+.++..++. +.||.||+..++.. .+..+ +...+. ..++. -...++ +.+
T Consensus 470 lssLr~i~s~Ge~l~~~~~~~~~~~~~~~~i~-~~yG~TE~~~~~~~~~~~~~~~~g~~g~-p~~g~-~v~v~d--~~g- 543 (728)
T PLN03052 470 WSSIRCFGSTGEASSVDDYLWLMSRAGYKPII-EYCGGTELGGGFVTGSLLQPQAFAAFST-PAMGC-KLFILD--DSG- 543 (728)
T ss_pred hhheeEEEecCCCCCHHHHHHHHHhcCCCCeE-eeccChhhCcccccCCCCCCCCCCcccc-CCCCc-eEEEEC--CCC-
Confidence 3447888888852 2223344555446777 99999997432211 11101 011111 11222 123333 221
Q ss_pred CCCCCCCCCccccccccCCCc--eEEEEEccc--c------------cee----------ccccCCEEEEccccCCCCeE
Q 007728 374 ASTSDFQPPKLVDLVDVEVGK--EYEPIITNY--T------------GVY----------RYKVGDILRVAGFHNASPHF 427 (591)
Q Consensus 374 ~~~~~~~~~~~~~~~ev~~G~--~yelvvTt~--~------------Gly----------RYr~GDvV~v~gf~~~~P~i 427 (591)
.+|..|+ .|||+|... . ++| -|+|||+++++. ...+
T Consensus 544 --------------~~v~~g~~~~GEL~v~~~~~~~~~~~~~~~~~~~yf~~~p~~~g~~~~~tGDl~~~d~----dG~l 605 (728)
T PLN03052 544 --------------NPYPDDAPCTGELALFPLMFGASSTLLNADHYKVYFKGMPVFNGKILRRHGDIFERTS----GGYY 605 (728)
T ss_pred --------------CCCCCCCCceEEEEEeCCCCCCCccccCchhhhhhhhcCCCCCCCEEEecCceEEECC----CCeE
Confidence 1344564 699999521 1 122 389999999973 5689
Q ss_pred EEeeecCceecccccccCHHHHHHHHHH
Q 007728 428 HFVRRKDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 428 ~f~gR~~~~l~~~Geki~e~~v~~av~~ 455 (591)
.|+||.||+||++|++|...|||++|..
T Consensus 606 ~i~GR~Dd~I~~~G~rI~~~EIE~~l~~ 633 (728)
T PLN03052 606 RAHGRADDTMNLGGIKVSSVEIERVCNA 633 (728)
T ss_pred EEEecCCCEEeeCCEEeCHHHHHHHHHh
Confidence 9999999999999999999999999964
No 71
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.29 E-value=6.9e-10 Score=124.31 Aligned_cols=64 Identities=9% Similarity=0.049 Sum_probs=54.0
Q ss_pred ccCCCceEEEEEcc---cccee-------------ccccCCEEEEccccCCCCeEEEeeecCceecccccccCHHHHHHH
Q 007728 389 DVEVGKEYEPIITN---YTGVY-------------RYKVGDILRVAGFHNASPHFHFVRRKDALLSIDYDKTDEADLQKA 452 (591)
Q Consensus 389 ev~~G~~yelvvTt---~~Gly-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~Geki~e~~v~~a 452 (591)
.+.+|+.+||+++. ..|+| .|+|||+++++. ...+.|+||.+|++++.|+++++.+||.+
T Consensus 380 ~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~eiE~~ 455 (545)
T PRK07768 380 VLPPRGVGVIELRGESVTPGYLTMDGFIPAQDADGWLDTGDLGYLTE----EGEVVVCGRVKDVIIMAGRNIYPTDIERA 455 (545)
T ss_pred CCCCCCEEEEEEccCcccccccCCCCCcccccCCCeeeccceEEEec----CCEEEEEccccceEEECCEecCHHHHHHH
Confidence 35679999999974 34554 399999999963 55899999999999999999999999999
Q ss_pred HHHH
Q 007728 453 VENA 456 (591)
Q Consensus 453 v~~a 456 (591)
|...
T Consensus 456 l~~~ 459 (545)
T PRK07768 456 AARV 459 (545)
T ss_pred HHhC
Confidence 9774
No 72
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.29 E-value=5.4e-11 Score=146.57 Aligned_cols=129 Identities=19% Similarity=0.271 Sum_probs=87.7
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCCCCC---------CCceeecCCCeEEEEEECCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCKTS---------EASYTIMPNMAYFEFLLHDP 370 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~---------~~~~~l~~~~~~~EFip~~~ 370 (591)
++.++.||. ....+.+++.+ +++++ +.||+||+.+.+...+.++.. ..+.. .++.. +..++ +
T Consensus 719 lr~i~~gGe~l~~~~~~~~~~~~-~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p-~~~~~-~~i~d--~ 792 (1296)
T PRK10252 719 LRQVFCSGEALPADLCREWQQLT-GAPLH-NLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYP-VWNTG-LRILD--A 792 (1296)
T ss_pred ccEEEEecCCCCHHHHHHHHhcC-CCEEE-eCCCcchhhheeeeeecccccccccCCCCCCcccc-cCCCE-EEEEC--C
Confidence 677888884 45556676666 78898 999999975433222211100 01111 12222 22332 2
Q ss_pred CCCCCCCCCCCCccccccccCCCceEEEEEcc---ccceec--------------------cccCCEEEEccccCCCCeE
Q 007728 371 GSPASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR--------------------YKVGDILRVAGFHNASPHF 427 (591)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR--------------------Yr~GDvV~v~gf~~~~P~i 427 (591)
.+ ..+..|+.|||+|+. ..||+. |+|||++++.. ...+
T Consensus 793 ~~---------------~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~----~G~l 853 (1296)
T PRK10252 793 RM---------------RPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLD----DGAV 853 (1296)
T ss_pred CC---------------CCCCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcC----CCcE
Confidence 11 245689999999975 345542 99999999963 5789
Q ss_pred EEeeecCceecccccccCHHHHHHHHHHH
Q 007728 428 HFVRRKDALLSIDYDKTDEADLQKAVENA 456 (591)
Q Consensus 428 ~f~gR~~~~l~~~Geki~e~~v~~av~~a 456 (591)
.|+||.+++++++|++|...+||.+|.+.
T Consensus 854 ~~~GR~d~~ik~~G~ri~~~eIE~~l~~~ 882 (1296)
T PRK10252 854 EYLGRSDDQLKIRGQRIELGEIDRAMQAL 882 (1296)
T ss_pred EEecccCCeEEEeeEEecHHHHHHHHHhC
Confidence 99999999999999999999999999873
No 73
>PRK07787 acyl-CoA synthetase; Validated
Probab=99.29 E-value=1.7e-10 Score=126.83 Aligned_cols=129 Identities=14% Similarity=0.162 Sum_probs=84.8
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCCC--CCCCceeecCCCeEEEEEECCCCCCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCK--TSEASYTIMPNMAYFEFLLHDPGSPASTS 377 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~--~~~~~~~l~~~~~~~EFip~~~~~~~~~~ 377 (591)
++.+++||. ....+.+++.+ +++++ +.||+||+.+.+....... +...+.. .+ ..-.++++.+ +
T Consensus 243 l~~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~vG~~-~~-g~~~~i~d~~--~----- 311 (471)
T PRK07787 243 ARLLVSGSAALPVPVFDRLAALT-GHRPV-ERYGMTETLITLSTRADGERRPGWVGLP-LA-GVETRLVDED--G----- 311 (471)
T ss_pred eeEEEECCCCCCHHHHHHHHHHc-CCCee-cccCccccCcceecCCCCcccCCccccc-CC-CcEEEEECCC--C-----
Confidence 788888884 35667777877 78898 9999999854321111100 1111111 12 2233344322 1
Q ss_pred CCCCCccccccccCCCc-eEEEEEcc---cccee--------------ccccCCEEEEccccCCCCeEEEeeec-Cceec
Q 007728 378 DFQPPKLVDLVDVEVGK-EYEPIITN---YTGVY--------------RYKVGDILRVAGFHNASPHFHFVRRK-DALLS 438 (591)
Q Consensus 378 ~~~~~~~~~~~ev~~G~-~yelvvTt---~~Gly--------------RYr~GDvV~v~gf~~~~P~i~f~gR~-~~~l~ 438 (591)
..+. ..|+ .|||+++. ..|+| -|+|||++.++ ....+.++||. +++++
T Consensus 312 -----~~~~----~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~----~dg~l~~~GR~~d~~i~ 378 (471)
T PRK07787 312 -----GPVP----HDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVD----PDGMHRIVGRESTDLIK 378 (471)
T ss_pred -----CCCC----CCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEc----CCCCEEEeCCCCceeEe
Confidence 1121 1343 68999975 45665 29999999996 35689999996 89999
Q ss_pred ccccccCHHHHHHHHHH
Q 007728 439 IDYDKTDEADLQKAVEN 455 (591)
Q Consensus 439 ~~Geki~e~~v~~av~~ 455 (591)
++|+|+++.+||++|..
T Consensus 379 ~~G~~v~~~eIE~~l~~ 395 (471)
T PRK07787 379 SGGYRIGAGEIETALLG 395 (471)
T ss_pred eCCEEECHHHHHHHHHh
Confidence 99999999999999976
No 74
>PRK12467 peptide synthase; Provisional
Probab=99.29 E-value=1.2e-10 Score=156.42 Aligned_cols=129 Identities=17% Similarity=0.188 Sum_probs=88.0
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCCCCCC------CceeecCCCeEEEEEECCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCKTSE------ASYTIMPNMAYFEFLLHDPGSP 373 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~~------~~~~l~~~~~~~EFip~~~~~~ 373 (591)
++.+++||. ....+++.+.+++++++ +.||.||+.+.+.......... .|. ..++. -+.+++ ...
T Consensus 773 lr~i~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~-p~~~~-~~~i~d--~~~- 846 (3956)
T PRK12467 773 QRALVCGGEALQVDLLARVRALGPGARLI-NHYGPTETTVGVSTYELSDEERDFGNVPIGQ-PLANL-GLYILD--HYL- 846 (3956)
T ss_pred ccEEEEEeecCCHHHHHHHHHhCCCCEEE-eCcCCChhhhheeeEecccccccCCCCcccC-CcCCC-EEEEEC--CCC-
Confidence 477788874 35556677777789999 9999999854322111100000 111 11222 222332 211
Q ss_pred CCCCCCCCCccccccccCCCceEEEEEcc---ccceec---------------------cccCCEEEEccccCCCCeEEE
Q 007728 374 ASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR---------------------YKVGDILRVAGFHNASPHFHF 429 (591)
Q Consensus 374 ~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR---------------------Yr~GDvV~v~gf~~~~P~i~f 429 (591)
..|.+|+.|||+|+. ..|||+ |||||+++.. ....+.|
T Consensus 847 --------------~~vp~G~~GEL~i~G~~v~~GYl~~p~~T~~~F~~~p~~~~g~r~yrTGDl~~~~----~dG~l~~ 908 (3956)
T PRK12467 847 --------------NPVPVGVVGELYIGGAGLARGYHRRPALTAERFVPDPFGADGGRLYRTGDLARYR----ADGVIEY 908 (3956)
T ss_pred --------------CCCCCCCceEEEecccccchhhcCCccccHhhCcCCCCCCCCceeEecCceeEEc----CCCcEEE
Confidence 245789999999964 455553 9999999996 3678999
Q ss_pred eeecCceecccccccCHHHHHHHHHH
Q 007728 430 VRRKDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 430 ~gR~~~~l~~~Geki~e~~v~~av~~ 455 (591)
+||.|++++++|++|...+||.+|.+
T Consensus 909 ~GR~d~~vki~G~rI~~~eIE~~L~~ 934 (3956)
T PRK12467 909 LGRMDHQVKIRGFRIELGEIEARLLA 934 (3956)
T ss_pred eccccCeEEECCEecCHHHHHHHHHh
Confidence 99999999999999999999999976
No 75
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.29 E-value=1.4e-10 Score=130.55 Aligned_cols=130 Identities=17% Similarity=0.227 Sum_probs=88.1
Q ss_pred ceeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCC---CCCCCceeecCCCeEEEEEECCCCCCC
Q 007728 301 KYLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMC---KTSEASYTIMPNMAYFEFLLHDPGSPA 374 (591)
Q Consensus 301 ~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~---~~~~~~~~l~~~~~~~EFip~~~~~~~ 374 (591)
..++.+.+||. ...++.+++.+ |++++ +.||+||+.......+.. .+...+.. .++ .-+++++++ +
T Consensus 333 ~~lr~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~p-~~~-~~v~ivd~~--~-- 404 (562)
T PRK12492 333 SALKLTNSGGTALVKATAERWEQLT-GCTIV-EGYGLTETSPVASTNPYGELARLGTVGIP-VPG-TALKVIDDD--G-- 404 (562)
T ss_pred cceeEEEeccccCCHHHHHHHHHHh-CCcee-eccCccccCceeeecCCcccccCCcccee-cCC-CEEEEECCC--C--
Confidence 34788888884 35556677767 79998 999999973221111100 01112221 122 224444322 1
Q ss_pred CCCCCCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEccccCCCCeEEEeeecCcee
Q 007728 375 STSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY--------------RYKVGDILRVAGFHNASPHFHFVRRKDALL 437 (591)
Q Consensus 375 ~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l 437 (591)
..+.+|+.|||+|+. ..|+| .|+|||+++++. ...+.|.||.++++
T Consensus 405 -------------~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~----~G~l~i~GR~~~~i 467 (562)
T PRK12492 405 -------------NELPLGERGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDP----DGFVRIVDRKKDLI 467 (562)
T ss_pred -------------CCCCCCCceEEEEeCCccccccccCchhhhhcccCCCceecCcEEEECC----CCeEEEecccCCeE
Confidence 135679999999975 44555 299999999973 56899999999999
Q ss_pred cccccccCHHHHHHHHHH
Q 007728 438 SIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 438 ~~~Geki~e~~v~~av~~ 455 (591)
++.|+++.+.+||.++.+
T Consensus 468 ~~~G~~i~~~eIE~~l~~ 485 (562)
T PRK12492 468 IVSGFNVYPNEIEDVVMA 485 (562)
T ss_pred EECCEEECHHHHHHHHHh
Confidence 999999999999999965
No 76
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=99.28 E-value=3e-11 Score=139.94 Aligned_cols=132 Identities=14% Similarity=0.251 Sum_probs=85.4
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCCC--CCCCceeecCCCeEEEEEECCCCCCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCK--TSEASYTIMPNMAYFEFLLHDPGSPASTS 377 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~--~~~~~~~l~~~~~~~EFip~~~~~~~~~~ 377 (591)
++.+++||+ ....+.++..+ |++++ ++||+||+..+.......+ .+..|-. .| ..-..+++.++.+
T Consensus 422 lr~i~~GGapl~~~~~~~~~~~~-g~~v~-~~YG~TEt~~~~~~~~~~~~~~gsvG~p-~p-~~evkivd~~~~~----- 492 (696)
T PLN02387 422 IRFMLSGGAPLSGDTQRFINICL-GAPIG-QGYGLTETCAGATFSEWDDTSVGRVGPP-LP-CCYVKLVSWEEGG----- 492 (696)
T ss_pred EEEEEEcCCCCCHHHHHHHHHHc-CCCee-EeechhhcccceeecCcccCCCCccCCC-CC-ceEEEEeeccccC-----
Confidence 889999985 23334455556 79999 9999999743221111111 1111211 12 2234555533321
Q ss_pred CCCCCccccccccCCCceEEEEEcc---cccee------------------ccccCCEEEEccccCCCCeEEEeeecCce
Q 007728 378 DFQPPKLVDLVDVEVGKEYEPIITN---YTGVY------------------RYKVGDILRVAGFHNASPHFHFVRRKDAL 436 (591)
Q Consensus 378 ~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly------------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~ 436 (591)
..+. -.++..|||+|.. +.||| -|+|||+++++ ....+.|+||.+|+
T Consensus 493 -----~~~~---~~~~p~GEi~vrGp~v~~GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d----~dG~l~i~gR~kd~ 560 (696)
T PLN02387 493 -----YLIS---DKPMPRGEIVIGGPSVTLGYFKNQEKTDEVYKVDERGMRWFYTGDIGQFH----PDGCLEIIDRKKDI 560 (696)
T ss_pred -----cccC---CCCCCCceEEeccCcccchhcCCHHHHhhhhccccCCCceeecCceEEEC----CCCcEEEEEcccce
Confidence 0111 1234568999963 67776 37899999996 36789999999999
Q ss_pred ecc-cccccCHHHHHHHHHH
Q 007728 437 LSI-DYDKTDEADLQKAVEN 455 (591)
Q Consensus 437 l~~-~Geki~e~~v~~av~~ 455 (591)
+++ .||+|++.+||+++.+
T Consensus 561 ik~~~Ge~I~p~eIE~~l~~ 580 (696)
T PLN02387 561 VKLQHGEYVSLGKVEAALSV 580 (696)
T ss_pred EECCCCeEEchHHHHHHHhc
Confidence 998 5999999999999865
No 77
>PRK06188 acyl-CoA synthetase; Validated
Probab=99.28 E-value=1e-09 Score=122.14 Aligned_cols=129 Identities=15% Similarity=0.118 Sum_probs=85.2
Q ss_pred eeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCC-CC-------CCCCceeecCCCeEEEEEECCC
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPM-CK-------TSEASYTIMPNMAYFEFLLHDP 370 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~-~~-------~~~~~~~l~~~~~~~EFip~~~ 370 (591)
.++.+..||. ......+.+.+ ++++. +.||+||+..++..... .. ....+. ..+ ..-.++++++.
T Consensus 282 ~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~-p~~-g~~v~i~~~~~ 357 (524)
T PRK06188 282 SLETVYYGASPMSPVRLAEAIERF-GPIFA-QYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGR-PTP-GLRVALLDEDG 357 (524)
T ss_pred ceeEEEEcCCCCCHHHHHHHHHHh-Cchhh-heeCccccCCceeecCchhccccccccCCcccc-ccC-CcEEEEEcCCC
Confidence 4777887774 33445555667 56776 99999998433321110 00 000111 112 22345544221
Q ss_pred CCCCCCCCCCCCccccccccCCCceEEEEEcc---cccee-------------ccccCCEEEEccccCCCCeEEEeeecC
Q 007728 371 GSPASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY-------------RYKVGDILRVAGFHNASPHFHFVRRKD 434 (591)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~ 434 (591)
.++..|+.|||+|++ ..|+| .|+|||+++... ...+.|.||.+
T Consensus 358 -----------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~ 416 (524)
T PRK06188 358 -----------------REVAQGEVGEICVRGPLVMDGYWNRPEETAEAFRDGWLHTGDVAREDE----DGFYYIVDRKK 416 (524)
T ss_pred -----------------CCCCCCCeeEEEEECcchhhhhcCChHHhhhhhcCCceeecceEEEcC----CccEEEEeccc
Confidence 245679999999986 34554 399999999963 56889999999
Q ss_pred ceecccccccCHHHHHHHHHH
Q 007728 435 ALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 435 ~~l~~~Geki~e~~v~~av~~ 455 (591)
++++++|+++.+.+||.++..
T Consensus 417 ~~i~~~G~~i~~~~IE~~l~~ 437 (524)
T PRK06188 417 DMIVTGGFNVFPREVEDVLAE 437 (524)
T ss_pred cceecCCEEECHHHHHHHHHh
Confidence 999999999999999999865
No 78
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.26 E-value=8.9e-11 Score=145.76 Aligned_cols=131 Identities=15% Similarity=0.146 Sum_probs=85.1
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCCCC-CC------------CceeecCCCeEEEEE
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCKT-SE------------ASYTIMPNMAYFEFL 366 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~-~~------------~~~~l~~~~~~~EFi 366 (591)
++.++.||. .....+++...++++++ +.||+||+.+.+........ .. .|.. .++.. +.++
T Consensus 531 lr~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~-~~~~~-~~iv 607 (1389)
T TIGR03443 531 LHHAFFVGDILTKRDCLRLQTLAENVCIV-NMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKG-MKNVQ-LLVV 607 (1389)
T ss_pred ccEEEEecccCCHHHHHHHHHhCCCCEEE-ECccCCccceeEEEEEccccccccchhhcccCcCcCCCc-cCCCE-EEEE
Confidence 566677764 34456677777789999 99999998543221110000 00 0000 01111 1122
Q ss_pred ECCCCCCCCCCCCCCCccccccccCCCceEEEEEcc---cccee------------------------------------
Q 007728 367 LHDPGSPASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY------------------------------------ 407 (591)
Q Consensus 367 p~~~~~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly------------------------------------ 407 (591)
+.++. ...+.+|+.|||+|.. ..|||
T Consensus 608 d~~~~---------------~~~~~~G~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (1389)
T TIGR03443 608 NRNDR---------------TQTCGVGEVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFW 672 (1389)
T ss_pred CCccC---------------CCcCCCCCceEEEecccccchhcCCChhHhhhhccCCcccCccccccccccccccccccc
Confidence 11110 1235679999999953 45655
Q ss_pred ------ccccCCEEEEccccCCCCeEEEeeecCceecccccccCHHHHHHHHHH
Q 007728 408 ------RYKVGDILRVAGFHNASPHFHFVRRKDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 408 ------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~Geki~e~~v~~av~~ 455 (591)
-|+|||++++. ....+.|+||.||+|+++|++|.+.+||.+|.+
T Consensus 673 ~~~~~~~y~TGDlg~~~----~dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~~ 722 (1389)
T TIGR03443 673 LGPRDRLYRTGDLGRYL----PDGNVECCGRADDQVKIRGFRIELGEIDTHLSQ 722 (1389)
T ss_pred CCCccceeecCCceeEc----CCCCEEEecccCCEEEeCcEEecHHHHHHHHHh
Confidence 29999999996 357899999999999999999999999999976
No 79
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=99.25 E-value=6.8e-11 Score=136.10 Aligned_cols=132 Identities=10% Similarity=0.080 Sum_probs=83.4
Q ss_pred eeEEEecCh--HHHHHHHHHHhCCCCeeccccccccccccccCC-CCCC--CCCCceeecCCCeEEEEEECCCCCCCCCC
Q 007728 303 LDAVATGSM--AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLN-PMCK--TSEASYTIMPNMAYFEFLLHDPGSPASTS 377 (591)
Q Consensus 303 l~~~~~g~~--~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~-~~~~--~~~~~~~l~~~~~~~EFip~~~~~~~~~~ 377 (591)
++.+++||+ .+-..++.+.++.++++ ++||+||+..++... +... ++..|.. .|+. -.-+++.++.+.
T Consensus 385 lr~~~~Ggapl~~~~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~p-~p~~-ev~i~d~~~~g~---- 457 (660)
T PLN02861 385 VRLLLSGAAPLPRHVEEFLRVTSCSVLS-QGYGLTESCGGCFTSIANVFSMVGTVGVP-MTTI-EARLESVPEMGY---- 457 (660)
T ss_pred EEEEEECCCCCCHHHHHHHHHHcCCCee-EecchhhhhhceeecccccCCCCCCccCc-cCce-EEEEEEccccCc----
Confidence 788899885 22234454556455777 999999974322111 1100 1111221 1221 122333222110
Q ss_pred CCCCCccccccccCCCceEEEEEc---cccceec-------------cccCCEEEEccccCCCCeEEEeeecCceecc-c
Q 007728 378 DFQPPKLVDLVDVEVGKEYEPIIT---NYTGVYR-------------YKVGDILRVAGFHNASPHFHFVRRKDALLSI-D 440 (591)
Q Consensus 378 ~~~~~~~~~~~ev~~G~~yelvvT---t~~GlyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~-~ 440 (591)
..+.+|..|||+|. ...|||+ |+|||+++++. ...+.|+||.+|+|++ +
T Consensus 458 ----------~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~----dG~l~i~GR~kd~Ik~~~ 523 (660)
T PLN02861 458 ----------DALSDVPRGEICLRGNTLFSGYHKRQDLTEEVLIDGWFHTGDIGEWQP----NGAMKIIDRKKNIFKLSQ 523 (660)
T ss_pred ----------ccCCCCCceeEEEcCCcccccccCCHHHHHhhhhccCcccCceEEECC----CCcEEEEeccccceEcCC
Confidence 12234567899995 3678884 99999999973 6789999999999997 7
Q ss_pred ccccCHHHHHHHHHH
Q 007728 441 YDKTDEADLQKAVEN 455 (591)
Q Consensus 441 Geki~e~~v~~av~~ 455 (591)
||+|++.+||+++.+
T Consensus 524 G~~I~p~eIE~~l~~ 538 (660)
T PLN02861 524 GEYVAVENLENTYSR 538 (660)
T ss_pred CeEEcHHHHHHHHhc
Confidence 999999999999975
No 80
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=99.24 E-value=1.9e-10 Score=127.88 Aligned_cols=132 Identities=14% Similarity=0.141 Sum_probs=94.1
Q ss_pred CceeeEEEecCh---HHHHHHHHHHhCCCCeecccccccccc--ccccCCCCC-CCCCCceeecCCCeEEEEEECCCCCC
Q 007728 300 TKYLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECF--FGLNLNPMC-KTSEASYTIMPNMAYFEFLLHDPGSP 373 (591)
Q Consensus 300 l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~--~~i~~~~~~-~~~~~~~~l~~~~~~~EFip~~~~~~ 373 (591)
|+.++.+.+||+ .+..+++++.+|...+. .+||+||.. ++++.+... .++..|.. .+ +.-=.+..+. +
T Consensus 298 l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~-q~YGmTE~~~~~~~~~~~~e~k~~svG~~-~~--g~~~~v~~e~-g- 371 (537)
T KOG1176|consen 298 LSSLRSVLSGGAPLSPATLEKVKERLPNVTVI-QGYGMTEAGGLITSNDWGPERKPGSVGRL-LP--GVRVKVLDET-G- 371 (537)
T ss_pred CCccEEEEecCCCCCHHHHHHHHHhCCCceEE-EeeccccccCceeecCCCccCcccccCcc-cc--ceEEEeeCCC-C-
Confidence 344777766664 46678888888657777 999999963 455555542 22233332 23 2211222222 1
Q ss_pred CCCCCCCCCccccccccCCCceEEEEEc---cccceec--------------cccCCEEEEccccCCCCeEEEeeecCce
Q 007728 374 ASTSDFQPPKLVDLVDVEVGKEYEPIIT---NYTGVYR--------------YKVGDILRVAGFHNASPHFHFVRRKDAL 436 (591)
Q Consensus 374 ~~~~~~~~~~~~~~~ev~~G~~yelvvT---t~~GlyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~ 436 (591)
..+.+++.|||++- -..|||. |+|||++-++ ....+.|++|.+|+
T Consensus 372 --------------~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D----~DG~l~IvdR~Kdl 433 (537)
T KOG1176|consen 372 --------------VSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFD----EDGYLYIVDRSKDL 433 (537)
T ss_pred --------------CCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEc----CCCeEEEecchhhh
Confidence 24567899999994 3688885 9999998886 58899999999999
Q ss_pred ecccccccCHHHHHHHHHH
Q 007728 437 LSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 437 l~~~Geki~e~~v~~av~~ 455 (591)
|+.+|+++.+.|||++|..
T Consensus 434 Ik~~G~qv~P~EiE~vL~~ 452 (537)
T KOG1176|consen 434 IKYGGEQVSPAEIEAVLLT 452 (537)
T ss_pred eeeCCEEeCHHHHHHHHHh
Confidence 9999999999999999976
No 81
>PRK09192 acyl-CoA synthetase; Validated
Probab=99.24 E-value=2.4e-09 Score=121.17 Aligned_cols=63 Identities=13% Similarity=0.096 Sum_probs=53.8
Q ss_pred ccCCCceEEEEEcc---cccee-------------ccccCCEEEEccccCCCCeEEEeeecCceecccccccCHHHHHHH
Q 007728 389 DVEVGKEYEPIITN---YTGVY-------------RYKVGDILRVAGFHNASPHFHFVRRKDALLSIDYDKTDEADLQKA 452 (591)
Q Consensus 389 ev~~G~~yelvvTt---~~Gly-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~Geki~e~~v~~a 452 (591)
++..|+.+||+++. ..||| .|+|||++.+ . ...+.|+||.+|+++++|++|++.+||++
T Consensus 405 ~~~~g~~Gel~i~g~~~~~gY~~~~~~~~~~~~dgw~~TGDlg~~-~----~G~l~~~GR~dd~i~~~G~~v~p~eIE~~ 479 (579)
T PRK09192 405 PLPERVVGHICVRGPSLMSGYFRDEESQDVLAADGWLDTGDLGYL-L----DGYLYITGRAKDLIIINGRNIWPQDIEWI 479 (579)
T ss_pred CCCCCCEEEEEecCCchhhhhcCCccccccccCCceeeccceeeE-E----CCEEEEEeccccEEEECCCccCHHHHHHH
Confidence 45678999999964 45666 3899999987 3 45899999999999999999999999999
Q ss_pred HHHH
Q 007728 453 VENA 456 (591)
Q Consensus 453 v~~a 456 (591)
|...
T Consensus 480 l~~~ 483 (579)
T PRK09192 480 AEQE 483 (579)
T ss_pred HHhc
Confidence 9874
No 82
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.24 E-value=3.1e-10 Score=131.93 Aligned_cols=126 Identities=18% Similarity=0.199 Sum_probs=79.5
Q ss_pred eeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCC--CCCCCCCceeecCCCeEEEEEECCCCCCCCC
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNP--MCKTSEASYTIMPNMAYFEFLLHDPGSPAST 376 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~--~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~ 376 (591)
.++.+++||. ...++.+++.+ |++++ +.||+||+...+...+ ...+...|. ..|+. -...++.+.
T Consensus 480 ~lr~i~~gg~~l~~~~~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~svG~-p~pg~-~~~i~d~~~------ 549 (718)
T PRK08043 480 RLRYVVAGAEKLQESTKQLWQDKF-GLRIL-EGYGVTECAPVVSINVPMAAKPGTVGR-ILPGM-DARLLSVPG------ 549 (718)
T ss_pred ceEEEEEeCccCCHHHHHHHHHHc-CCCee-cccCcccccceEEecCCcccCCCCCCC-cCCCC-eeEEecCCC------
Confidence 3788888885 34556677777 79998 9999999743211111 011111121 11221 122222111
Q ss_pred CCCCCCccccccccCCCceEEEEEcc---cccee-----------------------ccccCCEEEEccccCCCCeEEEe
Q 007728 377 SDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY-----------------------RYKVGDILRVAGFHNASPHFHFV 430 (591)
Q Consensus 377 ~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly-----------------------RYr~GDvV~v~gf~~~~P~i~f~ 430 (591)
.|+.+||.+.. ..|+| .|+|||+++++ ....+.|+
T Consensus 550 ---------------~~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d----~dG~l~i~ 610 (718)
T PRK08043 550 ---------------IEQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFD----EQGFVQIQ 610 (718)
T ss_pred ---------------CCCceEEEEecCCccccccCCCCcccccccccccccccccCCeEecCCEEEEc----CCCcEEEE
Confidence 13345666532 22332 38999999996 36689999
Q ss_pred eecCceecccccccCHHHHHHHHHHH
Q 007728 431 RRKDALLSIDYDKTDEADLQKAVENA 456 (591)
Q Consensus 431 gR~~~~l~~~Geki~e~~v~~av~~a 456 (591)
||.+|+|++.|++|++.+||+++...
T Consensus 611 GR~~d~I~~~G~~V~p~eIE~~l~~~ 636 (718)
T PRK08043 611 GRAKRFAKIAGEMVSLEMVEQLALGV 636 (718)
T ss_pred ecCCCeeEeCcEEcCHHHHHHHHHhC
Confidence 99999999999999999999998763
No 83
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=99.23 E-value=1.8e-09 Score=120.59 Aligned_cols=232 Identities=13% Similarity=0.114 Sum_probs=141.0
Q ss_pred ceeeEEEecCh---HHHHHHHHHHhCCCCeecccccccccc-ccccCCCCC-CCCCCceeecCCCe-EEEEEECCCCCCC
Q 007728 301 KYLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECF-FGLNLNPMC-KTSEASYTIMPNMA-YFEFLLHDPGSPA 374 (591)
Q Consensus 301 ~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~-~~i~~~~~~-~~~~~~~~l~~~~~-~~EFip~~~~~~~ 374 (591)
++|+++.++|. ..-.+.+.+.++..||. +.||.||.. ..+...+.- |. ..++.-.|..+ .++.++++ +
T Consensus 359 ~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~-e~~~qtEtG~~~i~~~~g~~p~-~pg~~~~p~~g~~v~i~de~--g-- 432 (626)
T KOG1175|consen 359 KSLRTCGSVGEPINPEAWEWWKRVTGLDPIY-ETYGQTETGGICITPKPGKLPI-KPGSAGKPFPGYDVQILDEN--G-- 432 (626)
T ss_pred ceEEEEeecCccCCcchHHHHHHhcCccchh-hceeeeccCceeeeccCCCCCc-CccccCCCCCCcceEEECCC--C--
Confidence 55899988884 23335566777434777 999999962 222211211 11 11221222222 34444432 1
Q ss_pred CCCCCCCCccccccccCCC-ceEEEEEcc------ccceec----------------cccCCEEEEccccCCCCeEEEee
Q 007728 375 STSDFQPPKLVDLVDVEVG-KEYEPIITN------YTGVYR----------------YKVGDILRVAGFHNASPHFHFVR 431 (591)
Q Consensus 375 ~~~~~~~~~~~~~~ev~~G-~~yelvvTt------~~GlyR----------------Yr~GDvV~v~gf~~~~P~i~f~g 431 (591)
.+++.+ +.+||+++. ..++|+ |.|||-++.+ +...|.+.|
T Consensus 433 -------------~~~~~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd----~dGY~~i~G 495 (626)
T KOG1175|consen 433 -------------NELPPSTGNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRD----EDGYYWILG 495 (626)
T ss_pred -------------CCcCCCCceeEEEEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEc----CCceEEEEe
Confidence 134444 789999964 233443 9999999996 688999999
Q ss_pred ecCceecccccccCHHHHHHHHHHHHHhhcccCceEEeeEeeecCCCCCcee-EEEEEEeecCCCCCCChHHHHHHHHHH
Q 007728 432 RKDALLSIDYDKTDEADLQKAVENASRLLREFDTRILEYTSYAEKKTNPGHH-VIYWEILVKDPANSPTDDVLKQCCLAM 510 (591)
Q Consensus 432 R~~~~l~~~Geki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~p~~Y-~l~~E~~~~~~~~~~~~~~~~~~~~~l 510 (591)
|.||+||+.|-+++..|||+||.+. +. +.|-+|+.-.....|.- .+|+-+.. ++ . ..+++..+|
T Consensus 496 R~DDviNvsGhRigtaEIE~al~~h-p~-------VaEsAvVg~p~~~~ge~v~aFvvl~~-g~---~---~~~~L~kel 560 (626)
T KOG1175|consen 496 RVDDVINVSGHRIGTAEIESALVEH-PA-------VAESAVVGSPDPIKGEVVLAFVVLKS-GS---H---DPEQLTKEL 560 (626)
T ss_pred cccccccccceeecHHHHHHHHhhC-cc-------hhheeeecCCCCCCCeEEEEEEEEcC-CC---C---ChHHHHHHH
Confidence 9999999999999999999999653 21 22333332111112222 35555542 21 2 233344555
Q ss_pred HhhhCHHHHHhhhccCccCCeEEEE----eCCccHHHHHHHHHhcCCCCCCCccccccCCHhHHHHHhhcc
Q 007728 511 EESLDSAYREARVVDKTIGPLEIRL----VKTGTFEELMDYAISRGASINQYKVARCVGSTSILKLLDSRV 577 (591)
Q Consensus 511 d~~Ln~~Y~~~R~~~g~l~p~~v~~----v~~gtf~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~l~~~~ 577 (591)
-..+ |+..|-+.-|+..+ +|.=...+.|++.+.+-.+.-|++-.-.+.|+++++.+.+.+
T Consensus 561 ~~~V-------R~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~~~~d~st~~dp~v~~~~~~~~ 624 (626)
T KOG1175|consen 561 VKHV-------RSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASGKAVGDTSTLADPSVIDHLRSIL 624 (626)
T ss_pred HHHH-------HhhcCcccccceeEecCCCCccccchhHHHHHHHHhccCccccccccCChHHHHHHHHhh
Confidence 5555 65555555555444 344455778887776544444889999999999999988754
No 84
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=99.23 E-value=3.6e-10 Score=127.05 Aligned_cols=132 Identities=15% Similarity=0.161 Sum_probs=87.8
Q ss_pred eeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCCCCC-CCceeecCCCeEEEEEECCCCCCCCCC
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCKTS-EASYTIMPNMAYFEFLLHDPGSPASTS 377 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~-~~~~~l~~~~~~~EFip~~~~~~~~~~ 377 (591)
.|+.+.+||. ....+++++.+ |++++ +.||+||+...+...+..... ...........-..+++ +.+
T Consensus 330 ~lr~v~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d--~~~----- 400 (560)
T PRK08751 330 SLKMTLGGGMAVQRSVAERWKQVT-GLTLV-EAYGLTETSPAACINPLTLKEYNGSIGLPIPSTDACIKD--DAG----- 400 (560)
T ss_pred hheeeeeCCCCCCHHHHHHHHHHh-CCeEE-EeeccccCCCceecccccccccCCCcCccCCCceEEEEC--CCC-----
Confidence 3788888884 45556777777 78888 999999975433221110000 01111111222233333 111
Q ss_pred CCCCCccccccccCCCceEEEEEcc---ccceec--------------cccCCEEEEccccCCCCeEEEeeecCceeccc
Q 007728 378 DFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR--------------YKVGDILRVAGFHNASPHFHFVRRKDALLSID 440 (591)
Q Consensus 378 ~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~ 440 (591)
.++..|+.|||+|++ ..|+|. |+|||+++++. ...+.|.||.+|++++.
T Consensus 401 ----------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~i~GR~~d~i~~~ 466 (560)
T PRK08751 401 ----------TVLAIGEIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDE----QGFVYIVDRKKDMILVS 466 (560)
T ss_pred ----------CCCCCCCceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcC----CceEEEEeechhheeEC
Confidence 245678999999975 345552 89999999963 56899999999999999
Q ss_pred ccccCHHHHHHHHHHH
Q 007728 441 YDKTDEADLQKAVENA 456 (591)
Q Consensus 441 Geki~e~~v~~av~~a 456 (591)
|+++.+.+||.+|.+.
T Consensus 467 G~~v~p~eiE~~l~~~ 482 (560)
T PRK08751 467 GFNVYPNEIEDVIAMM 482 (560)
T ss_pred CEEEcHHHHHHHHHhC
Confidence 9999999999999763
No 85
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=99.23 E-value=7.7e-10 Score=128.72 Aligned_cols=130 Identities=15% Similarity=0.212 Sum_probs=85.0
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCC-CC-CCCCCCceeecCCCeEEEEEECCCCCCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLN-PM-CKTSEASYTIMPNMAYFEFLLHDPGSPASTS 377 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~-~~-~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~ 377 (591)
++.+++||+ ....+.++..+ |+++. ++||+||+...+... +. ..++..|..+.|. .|+...+..+.
T Consensus 463 lr~~~sGGapl~~~~~~~~~~~~-g~~i~-~gYGlTEt~~~~~~~~~~~~~~gsvG~p~~pg---~e~ki~d~~~~---- 533 (746)
T PTZ00342 463 LEVILNGGGKLSPKIAEELSVLL-NVNYY-QGYGLTETTGPIFVQHADDNNTESIGGPISPN---TKYKVRTWETY---- 533 (746)
T ss_pred eEEEEEcCCCCCHHHHHHHHHhc-CCCEE-EeeccCcccceeeeccCCCCCcccccCcCCCc---EEEEEeccccc----
Confidence 788899985 34556666667 79998 999999973322111 11 0111122211122 34443321100
Q ss_pred CCCCCccccccccCCCceEEEEEc---cccceec--------------cccCCEEEEccccCCCCeEEEeeecCceecc-
Q 007728 378 DFQPPKLVDLVDVEVGKEYEPIIT---NYTGVYR--------------YKVGDILRVAGFHNASPHFHFVRRKDALLSI- 439 (591)
Q Consensus 378 ~~~~~~~~~~~ev~~G~~yelvvT---t~~GlyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~- 439 (591)
.....+..|||+|. .+.|||+ |+|||+++++ ....+.|+||.++++++
T Consensus 534 ----------~~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d----~dG~l~i~gR~kdlIkls 599 (746)
T PTZ00342 534 ----------KATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQIN----KNGSLTFLDRSKGLVKLS 599 (746)
T ss_pred ----------ccCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEEC----CCCeEEEEccCCCeEEeC
Confidence 01123456899995 3678874 9999999996 46799999999999995
Q ss_pred cccccCHHHHHHHHHH
Q 007728 440 DYDKTDEADLQKAVEN 455 (591)
Q Consensus 440 ~Geki~e~~v~~av~~ 455 (591)
.||+|++.+||+++..
T Consensus 600 ~Ge~I~p~eIE~~l~~ 615 (746)
T PTZ00342 600 QGEYIETDMLNNLYSQ 615 (746)
T ss_pred CCEEEchHHHHHHHhc
Confidence 6999999999999976
No 86
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=99.22 E-value=5.2e-10 Score=125.05 Aligned_cols=62 Identities=13% Similarity=0.169 Sum_probs=53.6
Q ss_pred cCCCceEEEEEcc---ccceec---------cccCCEEEEccccCCCCeEEEeeecCceecccccccCHHHHHHHHHHH
Q 007728 390 VEVGKEYEPIITN---YTGVYR---------YKVGDILRVAGFHNASPHFHFVRRKDALLSIDYDKTDEADLQKAVENA 456 (591)
Q Consensus 390 v~~G~~yelvvTt---~~GlyR---------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~Geki~e~~v~~av~~a 456 (591)
+..|+.|||+|+. ..|||. |+|||+++.. ...+.|+||.+|+|++.|++|++.+||.+|.+.
T Consensus 367 ~~~g~~GEl~v~g~~~~~GY~~~~~~~~~~~~~TGDl~~~~-----~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~ 440 (525)
T PRK05851 367 VAGREIGEIEIRGASMMSGYLGQAPIDPDDWFPTGDLGYLV-----DGGLVVCGRAKELITVAGRNIFPTEIERVAAQV 440 (525)
T ss_pred CCCCCeEEEEEecCchhhccccCCccCCCCceeccceEEEE-----CCEEEEEeecCCEEEECCEEeCHHHHHHHHHhC
Confidence 5779999999964 457763 9999999874 357999999999999999999999999999873
No 87
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=99.22 E-value=4.6e-10 Score=127.47 Aligned_cols=143 Identities=15% Similarity=0.131 Sum_probs=83.6
Q ss_pred eeEEEecCh-HHHHHHHHHHhCCCCeeccccccccccccccCCCCCCCCCCceeecCCCeEEEEEECCCCCCCCCCCCCC
Q 007728 303 LDAVATGSM-AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCKTSEASYTIMPNMAYFEFLLHDPGSPASTSDFQP 381 (591)
Q Consensus 303 l~~~~~g~~-~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~ 381 (591)
++++..++. ....+++.+.+|...++ +.||+||+.+.+.. ....++..+........-+.++..+...+ .. ..
T Consensus 316 l~~~~g~~l~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~---i~ 389 (600)
T PRK08279 316 LRLMIGNGLRPDIWDEFQQRFGIPRIL-EFYAASEGNVGFIN-VFNFDGTVGRVPLWLAHPYAIVKYDVDTG-EP---VR 389 (600)
T ss_pred eeEEecCCCCHHHHHHHHHHhCcceee-eeecccccceeecc-cCCCCcccccccccccccceeeeeccCcC-ce---ee
Confidence 455554443 45667788888544577 99999998553321 11111112221110000012222111100 00 00
Q ss_pred CccccccccCCCceEEEEEc-----ccccee-------------------ccccCCEEEEccccCCCCeEEEeeecCcee
Q 007728 382 PKLVDLVDVEVGKEYEPIIT-----NYTGVY-------------------RYKVGDILRVAGFHNASPHFHFVRRKDALL 437 (591)
Q Consensus 382 ~~~~~~~ev~~G~~yelvvT-----t~~Gly-------------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l 437 (591)
...-.+.++.+|+.+||++. .+.|+. -|+|||+++++. ...+.|.||.+|++
T Consensus 390 ~~~~~~~~~~~g~~Gel~~~i~~~~~~~GY~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~----dG~l~~~GR~~d~i 465 (600)
T PRK08279 390 DADGRCIKVKPGEVGLLIGRITDRGPFDGYTDPEASEKKILRDVFKKGDAWFNTGDLMRDDG----FGHAQFVDRLGDTF 465 (600)
T ss_pred CCCCccccCCCCCceeEEEEecCcccccccCCchhhHHHHhhcccCCCCceEeecceEEEcC----CccEEEecccCCeE
Confidence 00111235678999999842 233431 189999999973 56899999999999
Q ss_pred cccccccCHHHHHHHHHH
Q 007728 438 SIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 438 ~~~Geki~e~~v~~av~~ 455 (591)
+++|++|.+.+||++|.+
T Consensus 466 k~~G~~i~p~eIE~~l~~ 483 (600)
T PRK08279 466 RWKGENVATTEVENALSG 483 (600)
T ss_pred EECCcccCHHHHHHHHhc
Confidence 999999999999999986
No 88
>PRK12316 peptide synthase; Provisional
Probab=99.21 E-value=2.8e-10 Score=155.46 Aligned_cols=129 Identities=16% Similarity=0.110 Sum_probs=86.6
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCCCC---C----CCceeecCCCeEEEEEECCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCKT---S----EASYTIMPNMAYFEFLLHDPGS 372 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~---~----~~~~~l~~~~~~~EFip~~~~~ 372 (591)
++.+++||. ....+++.+.+++++++ +.||.||+.+........+. . ..|.. .++. -.-.+ ++.+
T Consensus 2263 lr~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p-~~~~-~~~i~--d~~~ 2337 (5163)
T PRK12316 2263 VRVYCFGGEAVPAASLRLAWEALRPVYLF-NGYGPTEAVVTPLLWKCRPQDPCGAAYVPIGRA-LGNR-RAYIL--DADL 2337 (5163)
T ss_pred eeEEEEecccCCHHHHHHHHHhCCCcEEE-ECccchhheeeeeeeecccccccCCCcCCcccc-cCCC-EEEEE--CCCC
Confidence 788999884 34455565666788888 99999998543211111110 0 01111 1121 12222 2211
Q ss_pred CCCCCCCCCCccccccccCCCceEEEEEcc---cccee---------------------ccccCCEEEEccccCCCCeEE
Q 007728 373 PASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY---------------------RYKVGDILRVAGFHNASPHFH 428 (591)
Q Consensus 373 ~~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly---------------------RYr~GDvV~v~gf~~~~P~i~ 428 (591)
..|.+|+.|||+|.. ..||| -|||||++++. ....+.
T Consensus 2338 ---------------~~vp~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~----~dG~l~ 2398 (5163)
T PRK12316 2338 ---------------NLLAPGMAGELYLGGEGLARGYLNRPGLTAERFVPDPFSASGERLYRTGDLARYR----ADGVVE 2398 (5163)
T ss_pred ---------------CCCCCCCeeEEEecchhhcccccCChhhhhhhccCCCCCCCCCeeEecccEEEEc----CCCcEE
Confidence 245789999999953 34554 29999999996 467899
Q ss_pred EeeecCceecccccccCHHHHHHHHHH
Q 007728 429 FVRRKDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 429 f~gR~~~~l~~~Geki~e~~v~~av~~ 455 (591)
|+||.|++++++|++|...|||.+|.+
T Consensus 2399 ~~GR~d~~iki~G~rie~~eIE~~l~~ 2425 (5163)
T PRK12316 2399 YLGRIDHQVKIRGFRIELGEIEARLQA 2425 (5163)
T ss_pred EecCCCCeEEEcCccCChHHHHHHHhh
Confidence 999999999999999999999999976
No 89
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.20 E-value=4.8e-10 Score=123.23 Aligned_cols=126 Identities=17% Similarity=0.213 Sum_probs=83.0
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccc-cCCCCC---CCCCCceeecCCCeEEEEEECCCCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGL-NLNPMC---KTSEASYTIMPNMAYFEFLLHDPGSPAS 375 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i-~~~~~~---~~~~~~~~l~~~~~~~EFip~~~~~~~~ 375 (591)
+++++.||. ...++.+++ + |++++ +.||+||....+ ...+.. .+...+. ..++ .|+.-.+..
T Consensus 256 lr~~~~~g~~~~~~~~~~~~~-~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~vG~-p~~~---~~~~i~~~~---- 324 (483)
T PRK03640 256 FRCMLLGGGPAPKPLLEQCKE-K-GIPVY-QSYGMTETASQIVTLSPEDALTKLGSAGK-PLFP---CELKIEKDG---- 324 (483)
T ss_pred ceEEEEcCCCCCHHHHHHHHH-h-CCCee-eeeccCcccccccccCcccccccCCCccc-ccCC---cEEEEecCC----
Confidence 788888874 334455554 4 79999 999999963221 111110 0011111 1122 232222211
Q ss_pred CCCCCCCccccccccCCCceEEEEEcc---cccee-------------ccccCCEEEEccccCCCCeEEEeeecCceecc
Q 007728 376 TSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY-------------RYKVGDILRVAGFHNASPHFHFVRRKDALLSI 439 (591)
Q Consensus 376 ~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 439 (591)
.++.+|+.|||+|++ ..|++ .|+|||++++.. ...+.|.||.++++++
T Consensus 325 ------------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~tGDl~~~~~----~g~l~~~GR~~~~i~~ 388 (483)
T PRK03640 325 ------------VVVPPFEEGEIVVKGPNVTKGYLNREDATRETFQDGWFKTGDIGYLDE----EGFLYVLDRRSDLIIS 388 (483)
T ss_pred ------------CcCCCCCceEEEEECcchhhhhcCCHHHHHHHHhcCCeeccceEEEcC----CCCEEEeecccCeEEe
Confidence 145689999999986 34444 489999999964 5679999999999999
Q ss_pred cccccCHHHHHHHHHH
Q 007728 440 DYDKTDEADLQKAVEN 455 (591)
Q Consensus 440 ~Geki~e~~v~~av~~ 455 (591)
.|++++..+|+.++..
T Consensus 389 ~G~~v~~~~ie~~i~~ 404 (483)
T PRK03640 389 GGENIYPAEIEEVLLS 404 (483)
T ss_pred CCEEECHHHHHHHHHh
Confidence 9999999999999975
No 90
>PRK13391 acyl-CoA synthetase; Provisional
Probab=99.20 E-value=2.4e-09 Score=118.92 Aligned_cols=128 Identities=12% Similarity=0.014 Sum_probs=86.9
Q ss_pred eeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccc-cccCCCCCC--CCCCceeecCCCeEEEEEECCCCCCCC
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFF-GLNLNPMCK--TSEASYTIMPNMAYFEFLLHDPGSPAS 375 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~-~i~~~~~~~--~~~~~~~l~~~~~~~EFip~~~~~~~~ 375 (591)
.++.+++||. ....+.+++.+ |.+++ +.||+||+.. .......+. +...+.. .+ +..++++.+ +
T Consensus 276 ~l~~~~~gg~~~~~~~~~~~~~~~-g~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~~-~~--g~~~i~d~~--~--- 345 (511)
T PRK13391 276 SLEVAIHAAAPCPPQVKEQMIDWW-GPIIH-EYYAATEGLGFTACDSEEWLAHPGTVGRA-MF--GDLHILDDD--G--- 345 (511)
T ss_pred ceeEEEEccCCCCHHHHHHHHHHc-CCcee-eeeccccccceEEecCccccccCCCcCCc-cc--ceEEEECCC--C---
Confidence 3788888874 45667788877 67787 9999999743 211111110 1111221 11 234444422 1
Q ss_pred CCCCCCCccccccccCCCceEEEEEcc--ccceec---------------cccCCEEEEccccCCCCeEEEeeecCceec
Q 007728 376 TSDFQPPKLVDLVDVEVGKEYEPIITN--YTGVYR---------------YKVGDILRVAGFHNASPHFHFVRRKDALLS 438 (591)
Q Consensus 376 ~~~~~~~~~~~~~ev~~G~~yelvvTt--~~GlyR---------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 438 (591)
..++.|+.+||++.. ..|+|. |+|||++++. ....+.|.||.+|+++
T Consensus 346 ------------~~~~~g~~Gel~~~g~~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~----~~g~l~~~gR~~~~i~ 409 (511)
T PRK13391 346 ------------AELPPGEPGTIWFEGGRPFEYLNDPAKTAEARHPDGTWSTVGDIGYVD----EDGYLYLTDRAAFMII 409 (511)
T ss_pred ------------CCCCCCCceEEEEecCcceEEcCChhHhHHhhccCCCEEecCCEEEEC----CCccEEEeccCCCEEE
Confidence 134678999999975 234442 7899999986 3578999999999999
Q ss_pred ccccccCHHHHHHHHHH
Q 007728 439 IDYDKTDEADLQKAVEN 455 (591)
Q Consensus 439 ~~Geki~e~~v~~av~~ 455 (591)
++|+++.+.+|+++|.+
T Consensus 410 ~~G~~v~~~eie~~l~~ 426 (511)
T PRK13391 410 SGGVNIYPQEAENLLIT 426 (511)
T ss_pred eCCEEECHHHHHHHHHh
Confidence 99999999999999976
No 91
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.20 E-value=2.8e-09 Score=117.92 Aligned_cols=129 Identities=11% Similarity=0.017 Sum_probs=87.8
Q ss_pred CceeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccc-cccCCCCC---CCCCCceeecCCCeEEEEEECCCCC
Q 007728 300 TKYLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFF-GLNLNPMC---KTSEASYTIMPNMAYFEFLLHDPGS 372 (591)
Q Consensus 300 l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~-~i~~~~~~---~~~~~~~~l~~~~~~~EFip~~~~~ 372 (591)
+..+++++.||. ...++.+++.+ |.+++ +.||+||+.. .+. ...+ .+...+..+ .+-++.++.+ +
T Consensus 261 ~~~lr~i~~~g~~~~~~~~~~~~~~~-~~~~~-~~yG~tE~~~~~~~-~~~~~~~~~~~~G~~~---~~~~~i~d~~--~ 332 (502)
T PRK08276 261 VSSLRVAIHAAAPCPVEVKRAMIDWW-GPIIH-EYYASSEGGGVTVI-TSEDWLAHPGSVGKAV---LGEVRILDED--G 332 (502)
T ss_pred cccceEEEecCCCCCHHHHHHHHHHh-CcHhh-hhcccccccceeEe-cCccccccCCCcceec---ccEEEEECCC--C
Confidence 445889999885 45667777877 67777 9999999743 211 1111 011122222 2234444321 1
Q ss_pred CCCCCCCCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEccccCCCCeEEEeeecCc
Q 007728 373 PASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY--------------RYKVGDILRVAGFHNASPHFHFVRRKDA 435 (591)
Q Consensus 373 ~~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~ 435 (591)
..+..|+.|||+++. ..|+| .|+|||+++++. ...+.+.||.++
T Consensus 333 ---------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~GR~~~ 393 (502)
T PRK08276 333 ---------------NELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDE----DGYLYLTDRKSD 393 (502)
T ss_pred ---------------CCCcCCCceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcC----CcCEEEeccCcc
Confidence 245678999999983 23443 378999999963 568999999999
Q ss_pred eecccccccCHHHHHHHHHH
Q 007728 436 LLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 436 ~l~~~Geki~e~~v~~av~~ 455 (591)
+++++|+++++.+||.++.+
T Consensus 394 ~i~~~G~~v~~~~iE~~i~~ 413 (502)
T PRK08276 394 MIISGGVNIYPQEIENLLVT 413 (502)
T ss_pred eEEeCCEEeCHHHHHHHHHh
Confidence 99999999999999999975
No 92
>PRK05850 acyl-CoA synthetase; Validated
Probab=99.20 E-value=8.6e-09 Score=116.43 Aligned_cols=63 Identities=17% Similarity=0.284 Sum_probs=53.7
Q ss_pred ccCCCceEEEEEcc---cccee-------------------------ccccCCEEEEccccCCCCeEEEeeecCceeccc
Q 007728 389 DVEVGKEYEPIITN---YTGVY-------------------------RYKVGDILRVAGFHNASPHFHFVRRKDALLSID 440 (591)
Q Consensus 389 ev~~G~~yelvvTt---~~Gly-------------------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~ 440 (591)
++.+|+.|||.|.. ..||| -|+|||++.+. ...+.|+||.+|+|+++
T Consensus 391 ~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-----~G~l~~~GR~~d~i~~~ 465 (578)
T PRK05850 391 ECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-----EGELFIVGRIKDLLIVD 465 (578)
T ss_pred CCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-----CCEEEEEcccccEEEEC
Confidence 56789999999964 34555 38999999874 35899999999999999
Q ss_pred ccccCHHHHHHHHHHH
Q 007728 441 YDKTDEADLQKAVENA 456 (591)
Q Consensus 441 Geki~e~~v~~av~~a 456 (591)
|++|++.+||.+|.+.
T Consensus 466 G~~i~p~eIE~~l~~~ 481 (578)
T PRK05850 466 GRNHYPDDIEATIQEI 481 (578)
T ss_pred CeecCHHHHHHHHHHh
Confidence 9999999999999873
No 93
>PRK05857 acyl-CoA synthetase; Validated
Probab=99.20 E-value=6.5e-10 Score=124.67 Aligned_cols=132 Identities=15% Similarity=0.119 Sum_probs=84.1
Q ss_pred eeEEEecChH---HHHHHHHHHhCCCCeeccccccccccc-cccCCCCC-------CCCCCceeecCCCeEEEEEECCCC
Q 007728 303 LDAVATGSMA---QYIHLLDYYSGSLPIASMLYSSSECFF-GLNLNPMC-------KTSEASYTIMPNMAYFEFLLHDPG 371 (591)
Q Consensus 303 l~~~~~g~~~---~y~~~l~~~~~g~~v~~~~ygaSEg~~-~i~~~~~~-------~~~~~~~~l~~~~~~~EFip~~~~ 371 (591)
++.+.+||+. ...+.+ +.+ |+++. +.||+||+.. .+.. +.. .+...+. ..++. -..+++.+..
T Consensus 288 lr~~~~gG~~~~~~~~~~~-~~~-g~~i~-~~YG~TE~~~~~~~~-~~~~~~~~~~~~~~~G~-~~~g~-~v~i~d~~~~ 361 (540)
T PRK05857 288 LRLVGYGGSRAIAADVRFI-EAT-GVRTA-QVYGLSETGCTALCL-PTDDGSIVKIEAGAVGR-PYPGV-DVYLAATDGI 361 (540)
T ss_pred ceEEEEcCccCCchhHHHH-HHh-CCeee-cccCCCcCCceeeec-ccccccccccccCCcCc-ccCCc-EEEEECcccc
Confidence 7888888752 222323 345 78998 9999999743 2211 110 0001111 12222 1223332211
Q ss_pred CCCCCCCCCCCccccccccCCCceEEEEEcc---cccee-------------ccccCCEEEEccccCCCCeEEEeeecCc
Q 007728 372 SPASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY-------------RYKVGDILRVAGFHNASPHFHFVRRKDA 435 (591)
Q Consensus 372 ~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~ 435 (591)
..+....+..|+.|||+|+. ..|+| -|+|||+++++ ....+.|.||.++
T Consensus 362 -----------~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDlg~~d----~~g~l~~~GR~~~ 426 (540)
T PRK05857 362 -----------GPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVLIDGWVNTGDLLERR----EDGFFYIKGRSSE 426 (540)
T ss_pred -----------CccccccCCCCCcceEEEeCcchhhhhhCCccchhhhcCCCceeccceEEEc----CCceEEEeccccc
Confidence 12222345678899999976 34666 39999999986 3678999999999
Q ss_pred eecccccccCHHHHHHHHHH
Q 007728 436 LLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 436 ~l~~~Geki~e~~v~~av~~ 455 (591)
+++++|+++++.+||.++..
T Consensus 427 ~ik~~G~~v~p~eIE~~l~~ 446 (540)
T PRK05857 427 MIICGGVNIAPDEVDRIAEG 446 (540)
T ss_pred cEecCCEEECHHHHHHHHHh
Confidence 99999999999999999975
No 94
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=99.20 E-value=3.1e-09 Score=121.20 Aligned_cols=63 Identities=19% Similarity=0.221 Sum_probs=53.7
Q ss_pred ccCCCceEEEEEcc---cccee--------------------------------ccccCCEEEEccccCCCCeEEEeeec
Q 007728 389 DVEVGKEYEPIITN---YTGVY--------------------------------RYKVGDILRVAGFHNASPHFHFVRRK 433 (591)
Q Consensus 389 ev~~G~~yelvvTt---~~Gly--------------------------------RYr~GDvV~v~gf~~~~P~i~f~gR~ 433 (591)
++.+|+.|||+|.. ..||| -|+|||++++. ...+.|+||.
T Consensus 423 ~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-----dG~l~i~GR~ 497 (612)
T PRK12476 423 ELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-----DGELYITGRI 497 (612)
T ss_pred CCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccceeE-----CCEEEEEecc
Confidence 56789999999963 45665 48999999763 4579999999
Q ss_pred CceecccccccCHHHHHHHHHHH
Q 007728 434 DALLSIDYDKTDEADLQKAVENA 456 (591)
Q Consensus 434 ~~~l~~~Geki~e~~v~~av~~a 456 (591)
+|+|+++|++|++.+||++|.+.
T Consensus 498 ~d~I~~~G~~I~p~eIE~~l~~~ 520 (612)
T PRK12476 498 ADLIVIDGRNHYPQDIEATVAEA 520 (612)
T ss_pred CcEEEECCcccCHHHHHHHHHHh
Confidence 99999999999999999999864
No 95
>PRK12316 peptide synthase; Provisional
Probab=99.19 E-value=1.4e-10 Score=158.33 Aligned_cols=129 Identities=16% Similarity=0.141 Sum_probs=87.6
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCC----CCCCCceeecCCCeEEEEEECCCCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMC----KTSEASYTIMPNMAYFEFLLHDPGSPAS 375 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~----~~~~~~~~l~~~~~~~EFip~~~~~~~~ 375 (591)
++.+++||. ....+++.+.+++++++ +.||.||+.+.+...... .+...|.. .++.. +..++ +.+
T Consensus 772 l~~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p-~~~~~-~~i~d--~~~--- 843 (5163)
T PRK12316 772 LRRIVCSGEALPADAQEQVFAKLPQAGLY-NLYGPTEAAIDVTHWTCVEEGGDSVPIGRP-IANLA-CYILD--ANL--- 843 (5163)
T ss_pred ccEEEEeeccCCHHHHHHHHHhCCCCeEE-eCcCcChheeeeeEEecccccCCCCCCccc-cCCCE-EEEEC--CCC---
Confidence 677888885 34556665667789999 999999986432211100 00011111 12222 22332 211
Q ss_pred CCCCCCCccccccccCCCceEEEEEcc---cccee--------------------ccccCCEEEEccccCCCCeEEEeee
Q 007728 376 TSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY--------------------RYKVGDILRVAGFHNASPHFHFVRR 432 (591)
Q Consensus 376 ~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly--------------------RYr~GDvV~v~gf~~~~P~i~f~gR 432 (591)
..+..|+.|||+|.. ..||+ -|+|||+++.. ....+.|+||
T Consensus 844 ------------~~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~----~dG~l~~~GR 907 (5163)
T PRK12316 844 ------------EPVPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYR----ADGVIEYAGR 907 (5163)
T ss_pred ------------CCCCCCCceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEEC----CCCCEEeecc
Confidence 245689999999953 44555 29999999996 3678999999
Q ss_pred cCceecccccccCHHHHHHHHHH
Q 007728 433 KDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 433 ~~~~l~~~Geki~e~~v~~av~~ 455 (591)
.|++++++|++|.+.|||++|.+
T Consensus 908 ~d~~ik~~G~rI~~~EIE~~l~~ 930 (5163)
T PRK12316 908 IDHQVKLRGLRIELGEIEARLLE 930 (5163)
T ss_pred cCCEEEEceEEcChHHHHHHHHh
Confidence 99999999999999999999976
No 96
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=99.19 E-value=1e-09 Score=123.03 Aligned_cols=128 Identities=13% Similarity=0.134 Sum_probs=85.2
Q ss_pred eeeEEEecCh---HHHHHHHHHHhCCCCeecccccccccc-ccccCCCCCCC---CCCceeecCCCeEEEEEECCCCCCC
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECF-FGLNLNPMCKT---SEASYTIMPNMAYFEFLLHDPGSPA 374 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~-~~i~~~~~~~~---~~~~~~l~~~~~~~EFip~~~~~~~ 374 (591)
.++.+++||. ....+.++. + |++++ +.||+||+. +++.....+.. ...+. ......++.++.+ +
T Consensus 303 ~lr~i~~gG~~~~~~~~~~~~~-~-~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~--~~~~~~~~i~d~~--~-- 373 (547)
T PRK06087 303 ALRFFLCGGTTIPKKVARECQQ-R-GIKLL-SVYGSTESSPHAVVNLDDPLSRFMHTDGY--AAAGVEIKVVDEA--R-- 373 (547)
T ss_pred CeEEEEEcCCCCCHHHHHHHHH-c-CCcEE-EEecccccCCccccCCCcchhhcCCcCCc--cCCCceEEEEcCC--C--
Confidence 3788888885 334444544 4 79999 999999973 32211111110 01111 1123345555422 1
Q ss_pred CCCCCCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEccccCCCCeEEEeeecCcee
Q 007728 375 STSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY--------------RYKVGDILRVAGFHNASPHFHFVRRKDALL 437 (591)
Q Consensus 375 ~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l 437 (591)
.++..|+.|||+|.. ..|+| -|+|||+++++ ....+.|.||.+|++
T Consensus 374 -------------~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~----~~g~l~i~GR~~d~i 436 (547)
T PRK06087 374 -------------KTLPPGCEGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMD----EAGYIKITGRKKDII 436 (547)
T ss_pred -------------CCCcCCCcceEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEEC----CCCCEEEEecchhhh
Confidence 245689999999953 34443 28999999996 356789999999999
Q ss_pred cccccccCHHHHHHHHHH
Q 007728 438 SIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 438 ~~~Geki~e~~v~~av~~ 455 (591)
+++|+++++.+|+.+|..
T Consensus 437 ~~~G~~v~p~~iE~~l~~ 454 (547)
T PRK06087 437 VRGGENISSREVEDILLQ 454 (547)
T ss_pred hcCCEEECHHHHHHHHHh
Confidence 999999999999999975
No 97
>PRK13388 acyl-CoA synthetase; Provisional
Probab=99.19 E-value=1e-09 Score=123.20 Aligned_cols=136 Identities=15% Similarity=0.119 Sum_probs=84.1
Q ss_pred eeEEEecCh--HHHHHHHHHHhCCCCeeccccccccccccccCCCCCCCCCCceeecCCCeEEEEEECCCCCCCCCCCCC
Q 007728 303 LDAVATGSM--AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCKTSEASYTIMPNMAYFEFLLHDPGSPASTSDFQ 380 (591)
Q Consensus 303 l~~~~~g~~--~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~ 380 (591)
++.+. |+. ....+++.+.+ +++++ +.||+||+...+...+..++...+..+ ++ .+++..+.... .
T Consensus 267 l~~~~-G~~~~~~~~~~~~~~~-~~~l~-~~YG~tE~~~~~~~~~~~~~~~vG~p~-~g---~~i~~~~~~~~------~ 333 (540)
T PRK13388 267 LRVAF-GNEASPRDIAEFSRRF-GCQVE-DGYGSSEGAVIVVREPGTPPGSIGRGA-PG---VAIYNPETLTE------C 333 (540)
T ss_pred eEEEE-CCCCCHHHHHHHHHHh-CCcee-cccccccccceeecCCCCCCCCCCCCC-CC---cEEEcCCCCcc------c
Confidence 45443 542 44556677777 78998 999999985332221222222223322 33 34444332100 0
Q ss_pred CCccccc--ccc-CCCceEEEEEc-c---cccee-------------ccccCCEEEEccccCCCCeEEEeeecCceeccc
Q 007728 381 PPKLVDL--VDV-EVGKEYEPIIT-N---YTGVY-------------RYKVGDILRVAGFHNASPHFHFVRRKDALLSID 440 (591)
Q Consensus 381 ~~~~~~~--~ev-~~G~~yelvvT-t---~~Gly-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~ 440 (591)
....++- ..+ ..|+.|||+++ . ..||| .|+|||+++++. ...+.|+||.+++++++
T Consensus 334 ~~~~~d~~g~~~~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~~~g~~~TGD~~~~~~----dg~l~i~GR~~d~i~~~ 409 (540)
T PRK13388 334 AVARFDAHGALLNADEAIGELVNTAGAGFFEGYYNNPEATAERMRHGMYWSGDLAYRDA----DGWIYFAGRTADWMRVD 409 (540)
T ss_pred cceeccCccccccCCCcceEEEEecCCcccccccCChHHHHHHhhcCceeccceEEEcC----CCcEEEeccCCceEEEC
Confidence 0001100 001 24678999997 3 34666 399999999963 56899999999999999
Q ss_pred ccccCHHHHHHHHHH
Q 007728 441 YDKTDEADLQKAVEN 455 (591)
Q Consensus 441 Geki~e~~v~~av~~ 455 (591)
|+++++.+||.+|.+
T Consensus 410 G~~v~p~eIE~~l~~ 424 (540)
T PRK13388 410 GENLSAAPIERILLR 424 (540)
T ss_pred CEEeCHHHHHHHHHh
Confidence 999999999999876
No 98
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.18 E-value=5.9e-09 Score=117.87 Aligned_cols=131 Identities=13% Similarity=0.163 Sum_probs=83.6
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCC-CCC---CCCCCcee----ecCCCeEEEEEECCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLN-PMC---KTSEASYT----IMPNMAYFEFLLHDPG 371 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~-~~~---~~~~~~~~----l~~~~~~~EFip~~~~ 371 (591)
+++++.||. ....+++++.+ |++++ +.||+||+....... +.. .+....+. ..+.....+.++. .
T Consensus 300 l~~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~--g 375 (576)
T PRK05620 300 LQEIYVGGSAVPPILIKAWEERY-GVDVV-HVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVND--G 375 (576)
T ss_pred eeEEEEcCCCCCHHHHHHHHHHh-CCcee-eeccccccccceeeeccCCccccccccccccccCCcCCceeEEEecC--C
Confidence 778888874 45566677777 78999 999999974311111 100 00000000 0112223344432 1
Q ss_pred CCCCCCCCCCCccccccccCCCceEEEEEcc---cccee------------------------------ccccCCEEEEc
Q 007728 372 SPASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY------------------------------RYKVGDILRVA 418 (591)
Q Consensus 372 ~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly------------------------------RYr~GDvV~v~ 418 (591)
. .+ +...|+.|||+++. ..||| -|+|||+++++
T Consensus 376 ~-----------~~---~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~ 441 (576)
T PRK05620 376 Q-----------VM---ESTDRNEGEIQVRGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVT 441 (576)
T ss_pred c-----------cc---cCCCCCceEEEEEcCcccccccCCccccccccccccccccchhhhcccccCCcEecCceEEEc
Confidence 1 11 11346789999964 34444 28999999986
Q ss_pred cccCCCCeEEEeeecCceecccccccCHHHHHHHHHH
Q 007728 419 GFHNASPHFHFVRRKDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 419 gf~~~~P~i~f~gR~~~~l~~~Geki~e~~v~~av~~ 455 (591)
. ...+.|+||.++++++.|++|.+.+||.+|.+
T Consensus 442 ~----dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~ 474 (576)
T PRK05620 442 R----DGFLTIHDRARDVIRSGGEWIYSAQLENYIMA 474 (576)
T ss_pred C----CceEEEEechhhhhhcCCEEEcHHHHHHHHhc
Confidence 3 56899999999999999999999999999976
No 99
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=99.18 E-value=8.6e-10 Score=122.51 Aligned_cols=128 Identities=16% Similarity=0.115 Sum_probs=82.9
Q ss_pred eeEEEecC--hHHHHHHHHHHhCCCCeeccccccccccccccCC-CC--CCCCCCceeecCCCeEEEEEECCCCCCCCCC
Q 007728 303 LDAVATGS--MAQYIHLLDYYSGSLPIASMLYSSSECFFGLNLN-PM--CKTSEASYTIMPNMAYFEFLLHDPGSPASTS 377 (591)
Q Consensus 303 l~~~~~g~--~~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~-~~--~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~ 377 (591)
++++..|+ ....+..+.+.+ |++++ +.||+||+....... +. +.....+.. .+ +.-.+.++.+ +
T Consensus 290 l~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~-~~-g~~~~i~d~~--~----- 358 (517)
T PRK08008 290 LREVMFYLNLSDQEKDAFEERF-GVRLL-TSYGMTETIVGIIGDRPGDKRRWPSIGRP-GF-CYEAEIRDDH--N----- 358 (517)
T ss_pred ceeeEEecCCCHHHHHHHHHHh-CCeEE-eeccccccccccccCCccccccCCccccC-CC-CcEEEEECCC--C-----
Confidence 44444444 244556777777 79999 999999974322110 10 000011111 11 2234444422 1
Q ss_pred CCCCCccccccccCCCceEEEEEcc------cccee--------------ccccCCEEEEccccCCCCeEEEeeecCcee
Q 007728 378 DFQPPKLVDLVDVEVGKEYEPIITN------YTGVY--------------RYKVGDILRVAGFHNASPHFHFVRRKDALL 437 (591)
Q Consensus 378 ~~~~~~~~~~~ev~~G~~yelvvTt------~~Gly--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l 437 (591)
.++..|+.|||+++. ..|+| -|+|||++.++. ...+.|.||.++++
T Consensus 359 ----------~~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~----~g~~~~~GR~~d~i 424 (517)
T PRK08008 359 ----------RPLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDE----EGFFYFVDRRCNMI 424 (517)
T ss_pred ----------CCCCCCCcceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccceEEECC----CCcEEEeecccceE
Confidence 245679999999974 22443 289999999863 56899999999999
Q ss_pred cccccccCHHHHHHHHHH
Q 007728 438 SIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 438 ~~~Geki~e~~v~~av~~ 455 (591)
++.|+++++.+||.++..
T Consensus 425 ~~~G~~i~p~~iE~~l~~ 442 (517)
T PRK08008 425 KRGGENVSCVELENIIAT 442 (517)
T ss_pred EeCCEEECHHHHHHHHHh
Confidence 999999999999999965
No 100
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=99.17 E-value=4.7e-09 Score=116.44 Aligned_cols=128 Identities=16% Similarity=0.123 Sum_probs=86.2
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCCC--CCCCceeecCCCeEEEEEECCCCCCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCK--TSEASYTIMPNMAYFEFLLHDPGSPASTS 377 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~--~~~~~~~l~~~~~~~EFip~~~~~~~~~~ 377 (591)
++.+.+||. ....+.+++.+ |++++ +.||+||...........+ ....+. ..+ ..-+++++ +..
T Consensus 280 l~~~~~~G~~l~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~G~-~~~-g~~v~i~d-~~~------ 348 (508)
T TIGR02262 280 LRLCTSAGEALPAEVGQRWQARF-GVDIV-DGIGSTEMLHIFLSNLPGDVRYGTSGK-PVP-GYRLRLVG-DGG------ 348 (508)
T ss_pred ceeEEEcCCCCCHHHHHHHHHHh-CCchh-hCccccccCceeecCCccCCCCCCcCC-CCC-CcEEEEEC-CCC------
Confidence 677777774 44566777778 78998 9999999742211111110 001111 112 22355554 211
Q ss_pred CCCCCccccccccCCCceEEEEEcc---cccee-------------ccccCCEEEEccccCCCCeEEEeeecCceecccc
Q 007728 378 DFQPPKLVDLVDVEVGKEYEPIITN---YTGVY-------------RYKVGDILRVAGFHNASPHFHFVRRKDALLSIDY 441 (591)
Q Consensus 378 ~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~G 441 (591)
..+.+|+.|||+|+. ..|+| .|+|||+++.. ....+.|.||.+|++++.|
T Consensus 349 ----------~~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~----~~g~~~~~gR~~d~i~~~G 414 (508)
T TIGR02262 349 ----------QDVAAGEPGELLISGPSSATMYWNNRAKTRDTFQGEWTRSGDKYVRN----DDGSYTYAGRTDDMLKVSG 414 (508)
T ss_pred ----------CCCCCCCeeEEEEecCccccccCCCHHHhHhhhhcCceeccceEEEc----CCccEEEeccccceeeeCC
Confidence 135679999999975 34554 37999999985 3557999999999999999
Q ss_pred cccCHHHHHHHHHH
Q 007728 442 DKTDEADLQKAVEN 455 (591)
Q Consensus 442 eki~e~~v~~av~~ 455 (591)
+++++.+|+++|.+
T Consensus 415 ~~v~~~~ie~~l~~ 428 (508)
T TIGR02262 415 IYVSPFEIESALIQ 428 (508)
T ss_pred EEECHHHHHHHHHh
Confidence 99999999999976
No 101
>PRK13390 acyl-CoA synthetase; Provisional
Probab=99.17 E-value=3.4e-09 Score=117.42 Aligned_cols=127 Identities=14% Similarity=0.066 Sum_probs=84.7
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccc-cccCCCCCC--CCCCceeecCCCeEEEEEECCCCCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFF-GLNLNPMCK--TSEASYTIMPNMAYFEFLLHDPGSPAST 376 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~-~i~~~~~~~--~~~~~~~l~~~~~~~EFip~~~~~~~~~ 376 (591)
++.+++||. ....+.+++.+ |.+++ +.||+||+.. .....+... +...+.. .++ -.+.++.+ +
T Consensus 272 l~~v~~~g~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~-~~g--~~~i~d~~--~---- 340 (501)
T PRK13390 272 LRAVIHAAAPCPVDVKHAMIDWL-GPIVY-EYYSSTEAHGMTFIDSPDWLAHPGSVGRS-VLG--DLHICDDD--G---- 340 (501)
T ss_pred hheEEEcCCCCCHHHHHHHHHhc-CCcee-eeecccccCceEEecchhhccCCCCcCCc-ccc--eEEEECCC--C----
Confidence 678888874 34556677777 68888 9999999742 211111100 0111111 122 23444321 1
Q ss_pred CCCCCCccccccccCCCceEEEEEcc---cccee----------------ccccCCEEEEccccCCCCeEEEeeecCcee
Q 007728 377 SDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY----------------RYKVGDILRVAGFHNASPHFHFVRRKDALL 437 (591)
Q Consensus 377 ~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly----------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l 437 (591)
..+.+|+.|||+|.+ ..|+| -|+|||+++++. ...+.|.||.++++
T Consensus 341 -----------~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~----dg~l~~~gR~~~~i 405 (501)
T PRK13390 341 -----------NELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDE----DGYLYLADRKSFMI 405 (501)
T ss_pred -----------CCCCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEECC----CCeEEEeeccccce
Confidence 135689999999965 33443 259999999963 57899999999999
Q ss_pred cccccccCHHHHHHHHHH
Q 007728 438 SIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 438 ~~~Geki~e~~v~~av~~ 455 (591)
++.|+++++.+||++|..
T Consensus 406 ~~~G~~v~p~eIE~~l~~ 423 (501)
T PRK13390 406 ISGGVNIYPQETENALTM 423 (501)
T ss_pred eECCeeeCHHHHHHHHHh
Confidence 999999999999999965
No 102
>PRK05691 peptide synthase; Validated
Probab=99.17 E-value=8.3e-10 Score=149.55 Aligned_cols=129 Identities=16% Similarity=0.128 Sum_probs=88.3
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCCCC----CCCceeecCCCeEEEEEECCCCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCKT----SEASYTIMPNMAYFEFLLHDPGSPAS 375 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~----~~~~~~l~~~~~~~EFip~~~~~~~~ 375 (591)
++.+++||. ....+++.+.+++++++ +.||.||+.+.+........ ...|.. .++ .....++.+ +
T Consensus 1390 lr~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p-~~~-~~~~i~d~~--~--- 1461 (4334)
T PRK05691 1390 LRRLFSGGEALPAELRNRVLQRLPQVQLH-NRYGPTETAINVTHWQCQAEDGERSPIGRP-LGN-VLCRVLDAE--L--- 1461 (4334)
T ss_pred ccEEEEeecCCCHHHHHHHHHhCCCcEEE-eCCCcChheeeeeeeecccccCCCCcccce-eCC-CEEEEECCC--C---
Confidence 678888884 45556777777889999 99999998543321110000 011111 122 223333311 1
Q ss_pred CCCCCCCccccccccCCCceEEEEEcc---cccee---------------------ccccCCEEEEccccCCCCeEEEee
Q 007728 376 TSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY---------------------RYKVGDILRVAGFHNASPHFHFVR 431 (591)
Q Consensus 376 ~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly---------------------RYr~GDvV~v~gf~~~~P~i~f~g 431 (591)
..|..|+.|||+|.. ..||+ -|||||+++.. ....+.|+|
T Consensus 1462 ------------~~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~----~dG~l~~~G 1525 (4334)
T PRK05691 1462 ------------NLLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWN----ADGALEYLG 1525 (4334)
T ss_pred ------------CCCCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEEC----CCCCEEEec
Confidence 245689999999953 33443 29999999996 367899999
Q ss_pred ecCceecccccccCHHHHHHHHHH
Q 007728 432 RKDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 432 R~~~~l~~~Geki~e~~v~~av~~ 455 (591)
|.+++++++|++|...+||.+|.+
T Consensus 1526 R~d~qiki~G~rie~~eIE~~l~~ 1549 (4334)
T PRK05691 1526 RLDQQVKLRGFRVEPEEIQARLLA 1549 (4334)
T ss_pred ccCcEEEECCEEcCHHHHHHHHHh
Confidence 999999999999999999999976
No 103
>PRK06178 acyl-CoA synthetase; Validated
Probab=99.16 E-value=3.8e-09 Score=119.02 Aligned_cols=121 Identities=13% Similarity=0.220 Sum_probs=79.5
Q ss_pred HHHHHHHHHHhCCCCeeccccccccccccccCCC--CCC-------CCCCceeecCCCeEEEEEECCCCCCCCCCCCCCC
Q 007728 312 AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNP--MCK-------TSEASYTIMPNMAYFEFLLHDPGSPASTSDFQPP 382 (591)
Q Consensus 312 ~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~--~~~-------~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~~~ 382 (591)
....+.+++.+ |.+++...||+||......... .+. +...+. ..|+ .-+++++++..
T Consensus 341 ~~~~~~~~~~~-g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~-p~~g-~~v~v~d~~~~----------- 406 (567)
T PRK06178 341 PDYRQRWRALT-GSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGL-PVPG-TEFKICDFETG----------- 406 (567)
T ss_pred HHHHHHHHHHh-CCcccccccccccccccceeccccccCccccccCCccccc-ccCC-cEEEEEcCCCC-----------
Confidence 45667777878 5556646899999633211111 000 000111 1222 23455553322
Q ss_pred ccccccccCCCceEEEEEcc---cccee-------------ccccCCEEEEccccCCCCeEEEeeecCceecccccccCH
Q 007728 383 KLVDLVDVEVGKEYEPIITN---YTGVY-------------RYKVGDILRVAGFHNASPHFHFVRRKDALLSIDYDKTDE 446 (591)
Q Consensus 383 ~~~~~~ev~~G~~yelvvTt---~~Gly-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~Geki~e 446 (591)
..+..|+.|||+|.. ..|+| .|+|||++++.+ ...+.|+||.+|+++++|+++++
T Consensus 407 -----~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dg~~~TGDl~~~~~----~g~l~i~GR~~d~i~~~G~~i~~ 477 (567)
T PRK06178 407 -----ELLPLGAEGEIVVRTPSLLKGYWNKPEATAEALRDGWLHTGDIGKIDE----QGFLHYLGRRKEMLKVNGMSVFP 477 (567)
T ss_pred -----CcCCCCCceEEEEECCcccccccCChhhhhhcccCCceeecceEEEec----CCeEEEEecccccEEECCEEECH
Confidence 135678899999964 34444 389999999963 56899999999999999999999
Q ss_pred HHHHHHHHH
Q 007728 447 ADLQKAVEN 455 (591)
Q Consensus 447 ~~v~~av~~ 455 (591)
.+||+++.+
T Consensus 478 ~eiE~~l~~ 486 (567)
T PRK06178 478 SEVEALLGQ 486 (567)
T ss_pred HHHHHHHHh
Confidence 999999876
No 104
>PLN03102 acyl-activating enzyme; Provisional
Probab=99.15 E-value=1.5e-09 Score=122.88 Aligned_cols=59 Identities=12% Similarity=0.200 Sum_probs=51.7
Q ss_pred CceEEEEEcc---cccee-------------ccccCCEEEEccccCCCCeEEEeeecCceecccccccCHHHHHHHHHH
Q 007728 393 GKEYEPIITN---YTGVY-------------RYKVGDILRVAGFHNASPHFHFVRRKDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 393 G~~yelvvTt---~~Gly-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~Geki~e~~v~~av~~ 455 (591)
|+.|||+|+. ..||| +|+|||+++++ ....+.|+||.+|++++.|++|++.+||.++.+
T Consensus 390 ~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~gw~~TGDlg~~d----~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~ 464 (579)
T PLN03102 390 KTMGEIVIKGSSIMKGYLKNPKATSEAFKHGWLNTGDVGVIH----PDGHVEIKDRSKDIIISGGENISSVEVENVLYK 464 (579)
T ss_pred CCceEEEEECcchhhhhcCChhhhHhhhccCceecCceEEEc----CCCeEEEEeccCcEEEECCEEECHHHHHHHHHh
Confidence 3679999975 56776 49999999996 467899999999999999999999999999976
No 105
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.15 E-value=1.2e-09 Score=133.08 Aligned_cols=126 Identities=14% Similarity=0.155 Sum_probs=83.3
Q ss_pred ceeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCC--CCCCCCceeecCCCeEEEEEECCCCCCCC
Q 007728 301 KYLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPM--CKTSEASYTIMPNMAYFEFLLHDPGSPAS 375 (591)
Q Consensus 301 ~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~--~~~~~~~~~l~~~~~~~EFip~~~~~~~~ 375 (591)
..++.+.+||. ...++.+++.+ |++++ +.||+||+...+...+. ..+...+. ..|+. -....|.+
T Consensus 907 ~~lr~v~~gg~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~vG~-p~~g~-~~~~~~~~------ 976 (1140)
T PRK06814 907 RSLRYVFAGAEKVKEETRQTWMEKF-GIRIL-EGYGVTETAPVIALNTPMHNKAGTVGR-LLPGI-EYRLEPVP------ 976 (1140)
T ss_pred cceeEEEEcCCcCCHHHHHHHHHHh-CCcEE-eccccccccceEEecCCCCCCCCcCCc-cCCCC-eEEEeecC------
Confidence 34788888885 45566777777 78998 99999997443211111 01111111 11111 11111111
Q ss_pred CCCCCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEccccCCCCeEEEeeecCceec
Q 007728 376 TSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY--------------RYKVGDILRVAGFHNASPHFHFVRRKDALLS 438 (591)
Q Consensus 376 ~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 438 (591)
..|+.|||.+.. ..|+| .|+|||+++++ ....+.|+||.+|+++
T Consensus 977 ---------------~~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d----~dG~l~~~GR~~d~i~ 1037 (1140)
T PRK06814 977 ---------------GIDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDIVTID----EEGFITIKGRAKRFAK 1037 (1140)
T ss_pred ---------------CCCCceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCEEEEC----CCCeEEEEecccCeee
Confidence 136678888853 34444 49999999996 3678999999999999
Q ss_pred ccccccCHHHHHHHHHH
Q 007728 439 IDYDKTDEADLQKAVEN 455 (591)
Q Consensus 439 ~~Geki~e~~v~~av~~ 455 (591)
++|+++++.+||+++.+
T Consensus 1038 ~~G~~v~~~eIE~~l~~ 1054 (1140)
T PRK06814 1038 IAGEMISLAAVEELAAE 1054 (1140)
T ss_pred eCCEEECHHHHHHHHHh
Confidence 99999999999999976
No 106
>PRK05691 peptide synthase; Validated
Probab=99.14 E-value=1.5e-09 Score=147.20 Aligned_cols=129 Identities=15% Similarity=0.185 Sum_probs=85.6
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccC---CCCCCCCC---CceeecCCCeEEEEEECCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNL---NPMCKTSE---ASYTIMPNMAYFEFLLHDPGSP 373 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~---~~~~~~~~---~~~~l~~~~~~~EFip~~~~~~ 373 (591)
++.++.||. ....+++.+.++++.++ +.||.||+.+.+.. +....... .|.. .++...+ .+ ++.+
T Consensus 3985 lr~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p-~~~~~~~-v~--d~~~- 4058 (4334)
T PRK05691 3985 LRWMLPTGEAMPPELARQWLQRYPQIGLV-NAYGPAECSDDVAFFRVDLASTRGSYLPIGSP-TDNNRLY-LL--DEAL- 4058 (4334)
T ss_pred ceEEEecCCcCCHHHHHHHHHhCCCCeEE-eCccCccceeEEEEEEcccccccCCcCCCCCc-cCCCEEE-EE--CCCC-
Confidence 677888884 33445555566789999 99999998653221 11110000 0110 1122111 11 2111
Q ss_pred CCCCCCCCCccccccccCCCceEEEEEcc---ccceec---------------------cccCCEEEEccccCCCCeEEE
Q 007728 374 ASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR---------------------YKVGDILRVAGFHNASPHFHF 429 (591)
Q Consensus 374 ~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR---------------------Yr~GDvV~v~gf~~~~P~i~f 429 (591)
..|..|..|||+|.. ..||+. |||||++++. ....|+|
T Consensus 4059 --------------~~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~----~dG~l~~ 4120 (4334)
T PRK05691 4059 --------------ELVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRR----SDGVLEY 4120 (4334)
T ss_pred --------------CCCCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceeec----CCCcEEE
Confidence 235679999999963 455552 9999999996 4678999
Q ss_pred eeecCceecccccccCHHHHHHHHHH
Q 007728 430 VRRKDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 430 ~gR~~~~l~~~Geki~e~~v~~av~~ 455 (591)
+||.|++++++|.+|...|||++|.+
T Consensus 4121 ~GR~d~qvki~G~riel~eIE~~l~~ 4146 (4334)
T PRK05691 4121 VGRIDHQVKIRGYRIELGEIEARLHE 4146 (4334)
T ss_pred ecccCCcEEeceEEecHHHHHHHHHh
Confidence 99999999999999999999999876
No 107
>PRK08308 acyl-CoA synthetase; Validated
Probab=99.14 E-value=1.7e-09 Score=117.16 Aligned_cols=58 Identities=10% Similarity=0.088 Sum_probs=50.6
Q ss_pred CCceEEEEEccccceeccccCCEEEEccccCCCCeEEEeeecCceecccccccCHHHHHHHHHH
Q 007728 392 VGKEYEPIITNYTGVYRYKVGDILRVAGFHNASPHFHFVRRKDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 392 ~G~~yelvvTt~~GlyRYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~Geki~e~~v~~av~~ 455 (591)
.|+.+|+++++..| +|+|||++++.. ...+.|+||.+++++++|+++++.+||+++.+
T Consensus 278 ~~~~gel~v~~~~~--~~~TGDl~~~~~----dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~ 335 (414)
T PRK08308 278 ENAPEEIVVKMGDK--EIFTKDLGYKSE----RGTLHFMGRMDDVINVSGLNVYPIEVEDVMLR 335 (414)
T ss_pred CCCCceEEEEcCCc--eEECCceEEECC----CccEEEecccCCeEEECCEEECHHHHHHHHHh
Confidence 46678999988766 478999999863 46899999999999999999999999999976
No 108
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=99.13 E-value=1.6e-09 Score=117.36 Aligned_cols=122 Identities=16% Similarity=0.195 Sum_probs=78.6
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCC-CCCC--CCceeecCCCeEEEEEECCCCCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPM-CKTS--EASYTIMPNMAYFEFLLHDPGSPAST 376 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~-~~~~--~~~~~l~~~~~~~EFip~~~~~~~~~ 376 (591)
++.+.+||. ...++.++. + |++++ +.||+||....+..... .... ..+. ..+ ..|+.....
T Consensus 221 l~~~~~~G~~~~~~~~~~~~~-~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~---~~~~~i~~~------ 287 (436)
T TIGR01923 221 LRKILLGGSAIPAPLIEEAQQ-Y-GLPIY-LSYGMTETCSQVTTATPEMLHARPDVGR-PLA---GREIKIKVD------ 287 (436)
T ss_pred eEEEEECCCCCCHHHHHHHHH-h-CCcee-eEecCCccchhccCcCccccccccCCCc-cCC---CcEEEEEeC------
Confidence 677777774 344555544 4 79998 99999997432211110 0000 0111 011 122221010
Q ss_pred CCCCCCccccccccCCCceEEEEEcc---ccceec-------------cccCCEEEEccccCCCCeEEEeeecCceeccc
Q 007728 377 SDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR-------------YKVGDILRVAGFHNASPHFHFVRRKDALLSID 440 (591)
Q Consensus 377 ~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~ 440 (591)
..++.+||+|++ ..|+|+ |+|||+++++. ...+.+.||.+|+++++
T Consensus 288 --------------~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~----dg~~~~~GR~~d~i~~~ 349 (436)
T TIGR01923 288 --------------NKEGHGEIMVKGANLMKGYLYQGELTPAFEQQGWFNTGDIGELDG----EGFLYVLGRRDDLIISG 349 (436)
T ss_pred --------------CCCCceEEEEECCccchhhCCChhhhhhhhcCCCeeccceEEEcC----CCCEEEeccccCeEEeC
Confidence 123668999976 345554 89999999974 56899999999999999
Q ss_pred ccccCHHHHHHHHHH
Q 007728 441 YDKTDEADLQKAVEN 455 (591)
Q Consensus 441 Geki~e~~v~~av~~ 455 (591)
|++++..+||.+|..
T Consensus 350 G~~v~~~~iE~~l~~ 364 (436)
T TIGR01923 350 GENIYPEEIETVLYQ 364 (436)
T ss_pred CEeeCHHHHHHHHHh
Confidence 999999999999975
No 109
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=99.11 E-value=1.6e-09 Score=124.93 Aligned_cols=130 Identities=14% Similarity=0.118 Sum_probs=81.9
Q ss_pred eeEEEecChH--HHHHHHHHHhCCCCeeccccccccccccccCC-CCC--CCCCCceeecCCCeEEEEE--ECCCCCCCC
Q 007728 303 LDAVATGSMA--QYIHLLDYYSGSLPIASMLYSSSECFFGLNLN-PMC--KTSEASYTIMPNMAYFEFL--LHDPGSPAS 375 (591)
Q Consensus 303 l~~~~~g~~~--~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~-~~~--~~~~~~~~l~~~~~~~EFi--p~~~~~~~~ 375 (591)
++.+++||+. +...++.+.+++++++ ++||+||+...+... +.. .++..+- ..|+ .|+. +.++.+
T Consensus 385 lr~~~~gga~l~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~-p~~~---~evki~d~~~~g--- 456 (660)
T PLN02430 385 LRLLISGGAPLSTEIEEFLRVTSCAFVV-QGYGLTETLGPTTLGFPDEMCMLGTVGA-PAVY---NELRLEEVPEMG--- 456 (660)
T ss_pred EEEEEECCCCCCHHHHHHHHHhcCCCee-eecchhhhhhceEeeccccCCCCCCccC-CCCc---eEEEEEEcCCcC---
Confidence 7888998852 2223333445467888 999999974321111 110 0111111 1121 2332 211111
Q ss_pred CCCCCCCccccccccCCCceEEEEEcc---ccceec-------------cccCCEEEEccccCCCCeEEEeeecCceecc
Q 007728 376 TSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR-------------YKVGDILRVAGFHNASPHFHFVRRKDALLSI 439 (591)
Q Consensus 376 ~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~ 439 (591)
..++..|..|||+|.. ..|||. |+|||+++++ ....+.|+||.+|++++
T Consensus 457 -----------~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~dGw~~TGDig~~d----~dG~l~i~gR~kd~ik~ 521 (660)
T PLN02430 457 -----------YDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVMKDGWFHTGDIGEIL----PNGVLKIIDRKKNLIKL 521 (660)
T ss_pred -----------cccCCCCCcceEEecCCCccccccCChHHhhhhhhccceeccceEEEC----CCCcEEEEEcccccEEc
Confidence 0123445679999964 578874 9999999996 35689999999999996
Q ss_pred -cccccCHHHHHHHHHH
Q 007728 440 -DYDKTDEADLQKAVEN 455 (591)
Q Consensus 440 -~Geki~e~~v~~av~~ 455 (591)
.||+|++.+||.++.+
T Consensus 522 ~~G~~V~p~~IE~~l~~ 538 (660)
T PLN02430 522 SQGEYVALEYLENVYGQ 538 (660)
T ss_pred CCCcEEchHHHHHHHhc
Confidence 6999999999998865
No 110
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=99.11 E-value=2.4e-09 Score=122.14 Aligned_cols=126 Identities=16% Similarity=0.184 Sum_probs=73.5
Q ss_pred eeEEEecCh---HHHHHHHHHH----hC-CCCeeccccccccccccccCCC--CCCCCCCceeecCCCeEEEEEECCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYY----SG-SLPIASMLYSSSECFFGLNLNP--MCKTSEASYTIMPNMAYFEFLLHDPGS 372 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~----~~-g~~v~~~~ygaSEg~~~i~~~~--~~~~~~~~~~l~~~~~~~EFip~~~~~ 372 (591)
++.+++||. ....+.+++. +| +++++ +.||+||+...+...+ ...++..+. ..|+ .|+..
T Consensus 336 lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~-~~YG~TE~~~~~~~~~~~~~~~~svG~-p~pg---~~v~i----- 405 (614)
T PRK08180 336 LKLLFYAGAALSQDVWDRLDRVAEATCGERIRMM-TGLGMTETAPSATFTTGPLSRAGNIGL-PAPG---CEVKL----- 405 (614)
T ss_pred eeEEEEccCCCCHHHHHHHHHHHHhhcCCCceee-eeecccccCCceEecccccCCCCcccC-ccCC---cEEEE-----
Confidence 788888885 3445555543 43 47788 9999999742221111 000011111 0111 11111
Q ss_pred CCCCCCCCCCccccccccCCCceEEEEEcc---ccceec--------------cccCCEEEEccccCCCCeEEEeeecCc
Q 007728 373 PASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR--------------YKVGDILRVAGFHNASPHFHFVRRKDA 435 (591)
Q Consensus 373 ~~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~ 435 (591)
+.+|..+||+|.. ..|||. |+|||++++.+=......+.|+||.+|
T Consensus 406 -----------------~d~~~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d 468 (614)
T PRK08180 406 -----------------VPVGGKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAE 468 (614)
T ss_pred -----------------ecCCCCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhh
Confidence 1135567999853 456663 899999999520012346899999988
Q ss_pred eec-ccccccC--HHHHHHHHHH
Q 007728 436 LLS-IDYDKTD--EADLQKAVEN 455 (591)
Q Consensus 436 ~l~-~~Geki~--e~~v~~av~~ 455 (591)
+++ .+|+|++ +.+++.++..
T Consensus 469 ~i~~~~G~~i~~~p~Eie~~l~~ 491 (614)
T PRK08180 469 DFKLSSGTWVSVGPLRARAVSAG 491 (614)
T ss_pred hEEcCCCcEecchhhhHHHHhhc
Confidence 876 4698776 7788777654
No 111
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=99.11 E-value=8.3e-10 Score=128.00 Aligned_cols=129 Identities=14% Similarity=0.146 Sum_probs=82.3
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCC-CC-CCCCCceeecCCCeEEEEEECCCCCCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNP-MC-KTSEASYTIMPNMAYFEFLLHDPGSPASTS 377 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~-~~-~~~~~~~~l~~~~~~~EFip~~~~~~~~~~ 377 (591)
++.+++||+ ....+.++..+ + +++ ++||+||+........ .. .+...|. ..|+ .|+.-.+..+.
T Consensus 430 lr~i~~GGa~l~~~~~~~~~~~~-~-~l~-~~YG~TEt~~~~~~~~~~~~~~~svG~-p~~g---~evkI~d~~~~---- 498 (700)
T PTZ00216 430 VRAMLSGGGPLSAATQEFVNVVF-G-MVI-QGWGLTETVCCGGIQRTGDLEPNAVGQ-LLKG---VEMKLLDTEEY---- 498 (700)
T ss_pred EEEEEECCCCCCHHHHHHHHHHh-h-hHh-hccCcccccccccccCCCCCCCCCcCC-cCCC---eEEEEeechhh----
Confidence 789999985 23334455555 5 888 9999999743211111 10 0111111 1122 23322221100
Q ss_pred CCCCCccccccccCCCceEEEEEcc---ccceec--------------cccCCEEEEccccCCCCeEEEeeecCceec-c
Q 007728 378 DFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR--------------YKVGDILRVAGFHNASPHFHFVRRKDALLS-I 439 (591)
Q Consensus 378 ~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~-~ 439 (591)
. ..+.+|..|||+|.. ..|||+ |+|||+++++ ....+.|+||.+|+++ .
T Consensus 499 ---~------~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~~TGDig~~d----~dG~l~i~GR~kd~ik~~ 565 (700)
T PTZ00216 499 ---K------HTDTPEPRGEILLRGPFLFKGYYKQEELTREVLDEDGWFHTGDVGSIA----ANGTLRIIGRVKALAKNC 565 (700)
T ss_pred ---c------cCCCCCCCceEEEcCCcccchhcCChhHhhhhccccCCeeccceEEEc----CCCcEEEEEehHhheecC
Confidence 0 012456678999963 567773 9999999996 3678999999999996 8
Q ss_pred cccccCHHHHHHHHHH
Q 007728 440 DYDKTDEADLQKAVEN 455 (591)
Q Consensus 440 ~Geki~e~~v~~av~~ 455 (591)
.|++|.+.+||+++.+
T Consensus 566 ~G~~I~p~eIE~~l~~ 581 (700)
T PTZ00216 566 LGEYIALEALEALYGQ 581 (700)
T ss_pred CCceeccHHHHHHHhc
Confidence 9999999999999976
No 112
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=99.10 E-value=1.2e-09 Score=117.59 Aligned_cols=115 Identities=22% Similarity=0.321 Sum_probs=77.1
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccc-cccCC-CCC--CCCCCceeecCCCeEEEEEECCCCCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFF-GLNLN-PMC--KTSEASYTIMPNMAYFEFLLHDPGSPAS 375 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~-~i~~~-~~~--~~~~~~~~l~~~~~~~EFip~~~~~~~~ 375 (591)
++.+++||. ....+++++.++.++++ +.||+||+.. ++... ... .+...+ ...| +.-++++++++.
T Consensus 279 lr~v~~~G~~l~~~~~~~~~~~~~~~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G-~~~~-~~~~~ivd~~~~---- 351 (417)
T PF00501_consen 279 LRTVISGGEPLPPDLLRRLRKAFGNAPII-NLYGSTETGSIATIRPPEDDIEKPGSVG-KPLP-GVEVKIVDPNTG---- 351 (417)
T ss_dssp -SEEEEESST-CHHHHHHHHHHHTTSEEE-EEEEEGGGSSEEEEEETTTHHSSTTSEB-EEST-TEEEEEECTTTS----
T ss_pred ccccccccccCChhhccccccccccccce-ecccccccceeeeccccccccccccccc-cccc-cccccccccccc----
Confidence 666666664 56778888888555888 9999999744 33110 111 111122 2223 556677765432
Q ss_pred CCCCCCCccccccccCCCceEEEEEcc---ccceec--------------cccCCEEEEccccCCCCeEEEeeecCceec
Q 007728 376 TSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR--------------YKVGDILRVAGFHNASPHFHFVRRKDALLS 438 (591)
Q Consensus 376 ~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 438 (591)
..+.+|+.|||+|+. ..|+|+ |+|||+++++ ....|.++||.+|+|+
T Consensus 352 ------------~~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d----~~G~~~~~GR~~~~i~ 415 (417)
T PF00501_consen 352 ------------EPLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLD----EDGYLYILGRSDDMIK 415 (417)
T ss_dssp ------------SBESTTSEEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEE----TTSEEEEEEEGSCEEE
T ss_pred ------------ccccccccccccccCCccceeeeccccccccccccccceecceEEEEC----CCCeEEEEEeeCCEEE
Confidence 245789999999974 456664 9999999996 3579999999999998
Q ss_pred cc
Q 007728 439 ID 440 (591)
Q Consensus 439 ~~ 440 (591)
+.
T Consensus 416 ~~ 417 (417)
T PF00501_consen 416 VR 417 (417)
T ss_dssp ET
T ss_pred eC
Confidence 63
No 113
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=99.09 E-value=2.4e-09 Score=120.43 Aligned_cols=132 Identities=17% Similarity=0.275 Sum_probs=92.4
Q ss_pred eeEEEecChHHHHHHHH--HHhCCCCeeccccccccccccccCCCCCCCCCCceeecCCCeEEEEEECCCCCCCCCCCCC
Q 007728 303 LDAVATGSMAQYIHLLD--YYSGSLPIASMLYSSSECFFGLNLNPMCKTSEASYTIMPNMAYFEFLLHDPGSPASTSDFQ 380 (591)
Q Consensus 303 l~~~~~g~~~~y~~~l~--~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~ 380 (591)
++..+|||+..-.+.++ +-. |+++. .+||.||...+++.++ + ..|.+ +..+
T Consensus 355 i~~~~sGGa~l~~~~~~f~~~l-Gi~i~-eGYGlTEts~~~~v~~---~-------------~~~~~-gtvG-------- 407 (613)
T COG1022 355 IRYALSGGAPLSPELLHFFRSL-GIPIL-EGYGLTETSAVVSVNP---P-------------DRFVL-GTVG-------- 407 (613)
T ss_pred EEEEEecCCcCCHHHHHHHHHc-CCCeE-EEecccccccceEEcc---c-------------cCccc-CCcC--------
Confidence 68889998632222222 333 79999 9999999755543332 1 11111 1111
Q ss_pred CCccccccccCCCceEEEEEcc---ccceec--------------cccCCEEEEccccCCCCeEEEeeecCceecc-ccc
Q 007728 381 PPKLVDLVDVEVGKEYEPIITN---YTGVYR--------------YKVGDILRVAGFHNASPHFHFVRRKDALLSI-DYD 442 (591)
Q Consensus 381 ~~~~~~~~ev~~G~~yelvvTt---~~GlyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~-~Ge 442 (591)
.+++-.|++.++.|||.|.. +.|||. |+|||+++++. ...+.++||.++++.+ +||
T Consensus 408 --~p~p~~evKI~d~GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~----~g~L~i~gRkK~~i~l~~Gk 481 (613)
T COG1022 408 --KPLPGIEVKIADDGEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDE----DGYLVITGRKKELIKLSNGK 481 (613)
T ss_pred --CcCCCceEEEccCceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcC----CCcEEEeecccceEECCCCc
Confidence 25555688888999999975 789997 99999999984 5899999999999654 589
Q ss_pred ccCHHHHHHHHHHHHHhhcccCceEEeeEeeec
Q 007728 443 KTDEADLQKAVENASRLLREFDTRILEYTSYAE 475 (591)
Q Consensus 443 ki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~ 475 (591)
+|.+.-||.++.+ .--+.+.+++.+
T Consensus 482 nIaP~~IE~~l~~--------~~~I~qi~vvg~ 506 (613)
T COG1022 482 NIAPEPIESKLAK--------SPLIEQICVVGD 506 (613)
T ss_pred ccChHHHHHHHhc--------CCCeeEEEEEec
Confidence 9999999997754 122445666664
No 114
>PRK12582 acyl-CoA synthetase; Provisional
Probab=99.09 E-value=1.8e-09 Score=123.51 Aligned_cols=125 Identities=17% Similarity=0.209 Sum_probs=75.8
Q ss_pred eeEEEecCh---HHHHHHHHHH----hC-CCCeeccccccccccccccC-CCC-CCCCCCceeecCCCeEEEEEECCCCC
Q 007728 303 LDAVATGSM---AQYIHLLDYY----SG-SLPIASMLYSSSECFFGLNL-NPM-CKTSEASYTIMPNMAYFEFLLHDPGS 372 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~----~~-g~~v~~~~ygaSEg~~~i~~-~~~-~~~~~~~~~l~~~~~~~EFip~~~~~ 372 (591)
++.+++||. ....+.+++. ++ +++++ +.||+||+...+.. ... ..+...+. ..|+. |+
T Consensus 348 lr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~-~~YG~TE~~~~~~~~~~~~~~~~svG~-p~pg~---~v------- 415 (624)
T PRK12582 348 LRLMAYGGATLSDDLYERMQALAVRTTGHRIPFY-TGYGATETAPTTTGTHWDTERVGLIGL-PLPGV---EL------- 415 (624)
T ss_pred eeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEE-eccccccccceeecccCCCCCCCCCCc-CCCCc---EE-------
Confidence 788888885 3444555554 33 47888 99999997432211 000 00001111 01110 11
Q ss_pred CCCCCCCCCCccccccccCCCceEEEEEcc---ccceec--------------cccCCEEEEccccCCCCeEEEeeecCc
Q 007728 373 PASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR--------------YKVGDILRVAGFHNASPHFHFVRRKDA 435 (591)
Q Consensus 373 ~~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~ 435 (591)
.-+..|+.|||+|.. ..|||. |+|||++++.+-......+.|+||.+|
T Consensus 416 ---------------~i~~~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d 480 (624)
T PRK12582 416 ---------------KLAPVGDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAE 480 (624)
T ss_pred ---------------EEccCCCceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchh
Confidence 112458889999954 567773 999999998421112357899999999
Q ss_pred eecc-cccccCHHHHH--HHHH
Q 007728 436 LLSI-DYDKTDEADLQ--KAVE 454 (591)
Q Consensus 436 ~l~~-~Geki~e~~v~--~av~ 454 (591)
++++ +|+||++.+|| .++.
T Consensus 481 ~i~~~~G~~i~p~~iE~e~~l~ 502 (624)
T PRK12582 481 DFKLSTGTWVSVGTLRPDAVAA 502 (624)
T ss_pred hEecCCCcEechHHHHHHHHHh
Confidence 9885 69999988875 4443
No 115
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=99.09 E-value=1e-09 Score=116.40 Aligned_cols=134 Identities=16% Similarity=0.198 Sum_probs=87.7
Q ss_pred CCceeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccc-cccCCCCCCCCC---CceeecCCCeEEEEEECCCC
Q 007728 299 NTKYLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFF-GLNLNPMCKTSE---ASYTIMPNMAYFEFLLHDPG 371 (591)
Q Consensus 299 ~l~~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~-~i~~~~~~~~~~---~~~~l~~~~~~~EFip~~~~ 371 (591)
+++.|+.++.||+ ....+++.... .+..+.-.||.||... .+..-+.+++++ ...+++++ +|---.+..
T Consensus 348 ~~s~lr~~vigGa~~s~eLlk~iv~~~-~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h---~Ea~iv~~~ 423 (596)
T KOG1177|consen 348 DLSSLRKGVIGGAPVSPELLKLIVNQM-NMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDH---YEAAIVDKD 423 (596)
T ss_pred chhhhhhheeCCCCCCHHHHHHHHHhh-CceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhcccc---cccccccCC
Confidence 4455777777775 33444444433 3444548899999632 111113333311 12333332 222222221
Q ss_pred CCCCCCCCCCCccccccccCCCceEEEEE---ccccceec--------------cccCCEEEEccccCCCCeEEEeeecC
Q 007728 372 SPASTSDFQPPKLVDLVDVEVGKEYEPII---TNYTGVYR--------------YKVGDILRVAGFHNASPHFHFVRRKD 434 (591)
Q Consensus 372 ~~~~~~~~~~~~~~~~~ev~~G~~yelvv---Tt~~GlyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~ 434 (591)
+ .+++.|..|||++ +|..|+|- |+|||+.++. .-..|+++||.+
T Consensus 424 g---------------~~v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~----enG~i~iVGRsk 484 (596)
T KOG1177|consen 424 G---------------SEVPLGTKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMD----ENGTIEIVGRSK 484 (596)
T ss_pred C---------------CccccCCCceEEEEechhheeecCCcccchhhcccccceecCceEEEc----CCCcEEEEEccc
Confidence 1 2456788899999 46788885 9999999996 577999999999
Q ss_pred ceecccccccCHHHHHHHHHH
Q 007728 435 ALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 435 ~~l~~~Geki~e~~v~~av~~ 455 (591)
|||..+||+|.+.|||+.+.+
T Consensus 485 dmI~rGGENVyP~ElE~fL~~ 505 (596)
T KOG1177|consen 485 DMIIRGGENVYPTELEDFLNK 505 (596)
T ss_pred CeEEeCCcccChHHHHHHHhh
Confidence 999999999999999999876
No 116
>PRK07798 acyl-CoA synthetase; Validated
Probab=99.05 E-value=8.4e-09 Score=114.50 Aligned_cols=131 Identities=18% Similarity=0.059 Sum_probs=84.7
Q ss_pred eeeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccc-cccCCCCCCCCCCceeecCCCeEEEEEECCCCCCCCCC
Q 007728 302 YLDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFF-GLNLNPMCKTSEASYTIMPNMAYFEFLLHDPGSPASTS 377 (591)
Q Consensus 302 ~l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~-~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~ 377 (591)
.++.+.+||. ....+.+++.+++++++ +.||+||... +......++....+-...+. .-.++++.+.
T Consensus 297 ~l~~i~~gG~~~~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~g~~~~~~~-~~~~i~~~~~------- 367 (533)
T PRK07798 297 SLFAIASGGALFSPSVKEALLELLPNVVLT-DSIGSSETGFGGSGTVAKGAVHTGGPRFTIG-PRTVVLDEDG------- 367 (533)
T ss_pred ceEEEEECCCCCCHHHHHHHHHHcCCCeEE-eeecccccccccccCCCCCCccCCCCccCCC-ceEEEECCCC-------
Confidence 3788888884 45667777778788998 9999999632 22111111111111011122 2344443221
Q ss_pred CCCCCccccccccCCCce--EEEEEcc--ccce-----------------eccccCCEEEEccccCCCCeEEEeeecCce
Q 007728 378 DFQPPKLVDLVDVEVGKE--YEPIITN--YTGV-----------------YRYKVGDILRVAGFHNASPHFHFVRRKDAL 436 (591)
Q Consensus 378 ~~~~~~~~~~~ev~~G~~--yelvvTt--~~Gl-----------------yRYr~GDvV~v~gf~~~~P~i~f~gR~~~~ 436 (591)
..+.+|+. ++++.+. ..|+ .-|+|||+++++. ...+.|.||.+++
T Consensus 368 ----------~~~~~g~~~~g~l~~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~----~g~l~~~GR~~~~ 433 (533)
T PRK07798 368 ----------NPVEPGSGEIGWIARRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEA----DGTITLLGRGSVC 433 (533)
T ss_pred ----------CCCCCCCCCeeEEEeecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcC----CCcEEEEccccce
Confidence 13355666 7777653 1222 2478999999963 5689999999999
Q ss_pred ecccccccCHHHHHHHHHH
Q 007728 437 LSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 437 l~~~Geki~e~~v~~av~~ 455 (591)
++++|+++++.+||.++.+
T Consensus 434 i~~~G~~v~~~eIE~~l~~ 452 (533)
T PRK07798 434 INTGGEKVFPEEVEEALKA 452 (533)
T ss_pred EecCCEEeCHHHHHHHHHh
Confidence 9999999999999999875
No 117
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.04 E-value=9.8e-09 Score=115.10 Aligned_cols=128 Identities=9% Similarity=0.092 Sum_probs=81.7
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCC------CC-------CCCceeecCCCeEEEEE
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMC------KT-------SEASYTIMPNMAYFEFL 366 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~------~~-------~~~~~~l~~~~~~~EFi 366 (591)
++.+++||. ....+.+++.+ |++++ +.||+||+.......... ++ ...+.. .| +.-.+++
T Consensus 295 l~~~~~~G~~l~~~~~~~~~~~~-~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p-~p-g~~~~i~ 370 (539)
T PRK07008 295 LRRTVIGGSACPPAMIRTFEDEY-GVEVI-HAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRV-IY-GVDMKIV 370 (539)
T ss_pred ceEEEEcCCCCCHHHHHHHHHHh-CCcee-cccccccccccceecccccccccCCchhhhhhcccCCcc-cc-ceEEEEE
Confidence 566677774 45667777778 79999 999999974211110000 00 000110 01 1223333
Q ss_pred ECCCCCCCCCCCCCCCccccccccCC--CceEEEEEcc---ccceec----------cccCCEEEEccccCCCCeEEEee
Q 007728 367 LHDPGSPASTSDFQPPKLVDLVDVEV--GKEYEPIITN---YTGVYR----------YKVGDILRVAGFHNASPHFHFVR 431 (591)
Q Consensus 367 p~~~~~~~~~~~~~~~~~~~~~ev~~--G~~yelvvTt---~~GlyR----------Yr~GDvV~v~gf~~~~P~i~f~g 431 (591)
+.+ + .++.. ++.+||+++. ..|+|. |+|||+++.+. ...+.|+|
T Consensus 371 d~~--~---------------~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~~~~~g~~~TGD~~~~~~----dg~l~~~G 429 (539)
T PRK07008 371 GDD--G---------------RELPWDGKAFGDLQVRGPWVIDRYFRGDASPLVDGWFPTGDVATIDA----DGFMQITD 429 (539)
T ss_pred CCC--C---------------CccCCCCCcceEEEEeCCccchhhcCChhhhhcCCCcccCceEEEcC----CCcEEEee
Confidence 321 1 12222 2468999985 345442 99999999964 55799999
Q ss_pred ecCceecccccccCHHHHHHHHHH
Q 007728 432 RKDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 432 R~~~~l~~~Geki~e~~v~~av~~ 455 (591)
|.+|++++.|+|+++.+||.++..
T Consensus 430 R~~d~i~~~G~~v~p~eIE~~l~~ 453 (539)
T PRK07008 430 RSKDVIKSGGEWISSIDIENVAVA 453 (539)
T ss_pred cccCEEEeCCeEEcHHHHHHHHHh
Confidence 999999999999999999999976
No 118
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=99.03 E-value=4.4e-09 Score=115.71 Aligned_cols=60 Identities=15% Similarity=0.207 Sum_probs=51.7
Q ss_pred CCceEEEEEcc---ccceec--------cccCCEEEEccccCCCCeEEEeeecCceecccccccCHHHHHHHHHH
Q 007728 392 VGKEYEPIITN---YTGVYR--------YKVGDILRVAGFHNASPHFHFVRRKDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 392 ~G~~yelvvTt---~~GlyR--------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~Geki~e~~v~~av~~ 455 (591)
.|+.|||+|.. ..|+|. |+|||+++++ ....+.|+||.+|+|+++|+||++.+||.++.+
T Consensus 298 ~g~~Gel~v~g~~~~~gY~~~~~~~~g~~~TGDl~~~d----~dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~ 368 (452)
T PRK07445 298 ANQTGNITIQAQSLALGYYPQILDSQGIFETDDLGYLD----AQGYLHILGRNSQKIITGGENVYPAEVEAAILA 368 (452)
T ss_pred CCCcceEEEeCCccchhhcCCccCCCCEEECCCEEEEc----CCCCEEEEeecCCEEEECCEEECHHHHHHHHHh
Confidence 48889999943 456653 8999999985 366899999999999999999999999999976
No 119
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.03 E-value=3.2e-08 Score=104.97 Aligned_cols=43 Identities=12% Similarity=0.112 Sum_probs=39.3
Q ss_pred ccccCCEEEEccccCCCCeEEEeeecCceecccccccCHHHHHHHHHH
Q 007728 408 RYKVGDILRVAGFHNASPHFHFVRRKDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 408 RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~Geki~e~~v~~av~~ 455 (591)
+|+|||++++. ...+.|+||.+|+++++|+++++.+||.+|.+
T Consensus 235 ~~~TGDl~~~~-----~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~ 277 (358)
T PRK07824 235 WFRTDDLGALD-----DGVLTVLGRADDAISTGGLTVLPQVVEAALAT 277 (358)
T ss_pred ceecccEEEEe-----CCEEEEEeccCCeEEECCEEECHHHHHHHHHh
Confidence 79999999982 45789999999999999999999999999976
No 120
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=98.98 E-value=1.7e-08 Score=113.11 Aligned_cols=129 Identities=14% Similarity=0.143 Sum_probs=81.6
Q ss_pred eeEEEecCh---HHHHHHHHHHhCCCCeeccccccccccccccCCCCCCC-C------------CCceeecCCCeEEEEE
Q 007728 303 LDAVATGSM---AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCKT-S------------EASYTIMPNMAYFEFL 366 (591)
Q Consensus 303 l~~~~~g~~---~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~-~------------~~~~~l~~~~~~~EFi 366 (591)
++.+++||. ...++.+++ + +++++ +.||+||+..........++ . ..+.. .+ ..|+.
T Consensus 296 lr~~~~~G~~l~~~~~~~~~~-~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~-~~---g~~i~ 368 (542)
T PRK06018 296 LKMVVCGGSAMPRSMIKAFED-M-GVEVR-HAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYP-PF---GVEMK 368 (542)
T ss_pred ceEEEEcCCCCCHHHHHHHHH-h-CCCeE-eeecccccCcccccccCccccccCCchhhhhccccCCCC-CC---CcEEE
Confidence 677788774 456677878 6 89999 99999997432111000000 0 00000 01 12332
Q ss_pred ECCCCCCCCCCCCCCCccccccccCCCceEEEEEcc---ccceec-----------cccCCEEEEccccCCCCeEEEeee
Q 007728 367 LHDPGSPASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVYR-----------YKVGDILRVAGFHNASPHFHFVRR 432 (591)
Q Consensus 367 p~~~~~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR-----------Yr~GDvV~v~gf~~~~P~i~f~gR 432 (591)
..+..+ ..+. +..+..+||++.. ..|+|. |+|||++++.. ...+.|+||
T Consensus 369 v~d~~~----------~~~~---~~~~~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~~TGDl~~~~~----~g~~~~~GR 431 (542)
T PRK06018 369 ITDDAG----------KELP---WDGKTFGRLKVRGPAVAAAYYRVDGEILDDDGFFDTGDVATIDA----YGYMRITDR 431 (542)
T ss_pred EECCCC----------CCCC---CCCCceeEEEEecCCcchhhhcCcccEecCCcEEEcCCEEEEcC----CccEEEEec
Confidence 222211 1111 1112578999963 456664 99999999863 557999999
Q ss_pred cCceecccccccCHHHHHHHHHH
Q 007728 433 KDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 433 ~~~~l~~~Geki~e~~v~~av~~ 455 (591)
.+++++++|+|+++.+||.++..
T Consensus 432 ~~d~i~~~G~~v~~~eIE~~l~~ 454 (542)
T PRK06018 432 SKDVIKSGGEWISSIDLENLAVG 454 (542)
T ss_pred CCCeEEECCEEECHHHHHHHHHh
Confidence 99999999999999999999975
No 121
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=98.96 E-value=1.9e-08 Score=112.57 Aligned_cols=134 Identities=13% Similarity=0.162 Sum_probs=91.9
Q ss_pred ccCCCCceeeEEEecChH---HHHHHHHHHhCCCCeeccccccccccccccCC-CCCC-CCCCceeecCCCeEEEEEECC
Q 007728 295 RIWPNTKYLDAVATGSMA---QYIHLLDYYSGSLPIASMLYSSSECFFGLNLN-PMCK-TSEASYTIMPNMAYFEFLLHD 369 (591)
Q Consensus 295 ~lWP~l~~l~~~~~g~~~---~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~-~~~~-~~~~~~~l~~~~~~~EFip~~ 369 (591)
.|+++ ++.+++|++. ....=++..+ |++|+ ++||.||+..|..+. +.+. .+..|.. +| ++-+=++++.
T Consensus 416 ~LGg~---vr~~~sGaAPls~ev~~F~r~~~-g~~v~-eGYGlTEts~g~~~~~~~d~~lgsvG~p-~p-~~~vKL~dvp 488 (691)
T KOG1256|consen 416 SLGGN---VRLIISGAAPLSPEVLTFFRAAL-GCRVL-EGYGLTETSAGTTLTLPGDNVLGSVGPP-VP-GNEVKLVDVP 488 (691)
T ss_pred HhcCc---eeEEEecCCCCCHHHHHHHHHhc-Cceee-ecccccccCCceEeccCCCCCCCCcCCc-cc-CceEEEechH
Confidence 47788 8999999862 3333344444 89999 999999986443221 1111 1112221 12 2223333444
Q ss_pred CCCCCCCCCCCCCccccccccCCCceEEEEEc---cccceec--------------cccCCEEEEccccCCCCeEEEeee
Q 007728 370 PGSPASTSDFQPPKLVDLVDVEVGKEYEPIIT---NYTGVYR--------------YKVGDILRVAGFHNASPHFHFVRR 432 (591)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~ev~~G~~yelvvT---t~~GlyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR 432 (591)
+.+ -...|..|||.|- -+.|||- .+|||+.+++. ...+.++||
T Consensus 489 e~n----------------y~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~~p----~G~l~IidR 548 (691)
T KOG1256|consen 489 EMN----------------YDADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEWDP----NGTLKIIDR 548 (691)
T ss_pred HhC----------------cCcCCCcceEEEecchhceeccCChHHHhhhhccccccccccceeECC----CccEEEEec
Confidence 432 1235678999994 5899996 99999999985 779999999
Q ss_pred cCceeccc-ccccCHHHHHHHHHH
Q 007728 433 KDALLSID-YDKTDEADLQKAVEN 455 (591)
Q Consensus 433 ~~~~l~~~-Geki~e~~v~~av~~ 455 (591)
.++++++. ||.|.+..||++..+
T Consensus 549 kK~ifklaqGEyVaPe~IEniy~~ 572 (691)
T KOG1256|consen 549 KKNIFKLAQGEYVAPEKIENIYKR 572 (691)
T ss_pred ccceEEcCCCCccChHHHHHHHhc
Confidence 99998877 799999999999977
No 122
>PLN02479 acetate-CoA ligase
Probab=98.93 E-value=3.7e-08 Score=111.19 Aligned_cols=58 Identities=10% Similarity=0.150 Sum_probs=50.0
Q ss_pred ceEEEEEcc---cccee-------------ccccCCEEEEccccCCCCeEEEeeecCceecccccccCHHHHHHHHHH
Q 007728 394 KEYEPIITN---YTGVY-------------RYKVGDILRVAGFHNASPHFHFVRRKDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 394 ~~yelvvTt---~~Gly-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~Geki~e~~v~~av~~ 455 (591)
+.|||+|+. ..|+| .|+|||+++++ ....+.|+||.+|++++.|+++++.+||.++.+
T Consensus 401 ~~GEl~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDl~~~~----~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~ 474 (567)
T PLN02479 401 TMGEIVMRGNMVMKGYLKNPKANEEAFANGWFHSGDLGVKH----PDGYIEIKDRSKDIIISGGENISSLEVENVVYT 474 (567)
T ss_pred CceEEEEeccchhhhhhcCcccccchhcCCceecceeEEEc----CCccEEEeccccceEEeCCEEEcHHHHHHHHHh
Confidence 579999974 45666 39999999986 356899999999999999999999999999975
No 123
>PRK08162 acyl-CoA synthetase; Validated
Probab=98.93 E-value=4.8e-08 Score=109.36 Aligned_cols=58 Identities=9% Similarity=0.184 Sum_probs=50.2
Q ss_pred ceEEEEEcc---ccceec-------------cccCCEEEEccccCCCCeEEEeeecCceecccccccCHHHHHHHHHH
Q 007728 394 KEYEPIITN---YTGVYR-------------YKVGDILRVAGFHNASPHFHFVRRKDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 394 ~~yelvvTt---~~GlyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~Geki~e~~v~~av~~ 455 (591)
+.|||+|+. ..|+|. |+|||+++++. ...+.|+||.+++++++|+++++.+||.+|.+
T Consensus 387 ~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~d~----dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~ 460 (545)
T PRK08162 387 TIGEIMFRGNIVMKGYLKNPKATEEAFAGGWFHTGDLAVLHP----DGYIKIKDRSKDIIISGGENISSIEVEDVLYR 460 (545)
T ss_pred ceeEEEEecCcchhhhcCChhhhHHHhhCCCcccCceEEEcC----CccEEEEecccceEEeCCEEECHHHHHHHHHh
Confidence 369999975 456663 99999999974 56899999999999999999999999999976
No 124
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.87 E-value=8.4e-08 Score=115.51 Aligned_cols=140 Identities=12% Similarity=0.117 Sum_probs=89.0
Q ss_pred eeeEEEecCh-HHHHHHHHHHhCCCCeeccccccccccccccCCCCCCCCCCceeecCCCeEEEEEECCCCCCCCCCCCC
Q 007728 302 YLDAVATGSM-AQYIHLLDYYSGSLPIASMLYSSSECFFGLNLNPMCKTSEASYTIMPNMAYFEFLLHDPGSPASTSDFQ 380 (591)
Q Consensus 302 ~l~~~~~g~~-~~y~~~l~~~~~g~~v~~~~ygaSEg~~~i~~~~~~~~~~~~~~l~~~~~~~EFip~~~~~~~~~~~~~ 380 (591)
.++.+++|++ ....+++.+.+++++++ +.||+||+.+.+...+...+...+.. .|+..-++..+.+...++
T Consensus 721 slr~~~g~gl~~~l~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~~~svG~p-~pg~~~v~i~~~d~~~g~------ 792 (994)
T PRK07868 721 PVRLFIGSGMPTGLWERVVEAFAPAHVV-EFFATTDGQAVLANVSGAKIGSKGRP-LPGAGRVELAAYDPEHDL------ 792 (994)
T ss_pred ceEEEecCCCCHHHHHHHHHHhCchhee-eeeecccccccccccCCCCCcccCCc-cCCCCceeEEEecCcCCc------
Confidence 4677776666 45667788888778998 99999998542211011111122222 233212333222210000
Q ss_pred CCcccc----ccccCCCceEEEEEccc----------cceec-----cccCCEEEEccccCCCCeEEEeeecCceecccc
Q 007728 381 PPKLVD----LVDVEVGKEYEPIITNY----------TGVYR-----YKVGDILRVAGFHNASPHFHFVRRKDALLSIDY 441 (591)
Q Consensus 381 ~~~~~~----~~ev~~G~~yelvvTt~----------~GlyR-----Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~G 441 (591)
-.+. ..++++|+.|||++... .|.++ |+|||+++++ ....+.|+||.+++|++.|
T Consensus 793 --li~d~~G~~~~~~~ge~Gel~~~~~~~~~p~~t~~~~~~~~~dgw~~TGDlg~~d----~dG~l~~~GR~dd~Ik~~G 866 (994)
T PRK07868 793 --ILEDDRGFVRRAEVNEVGVLLARARGPIDPTASVKRGVFAPADTWISTEYLFRRD----DDGDYWLVDRRGSVIRTAR 866 (994)
T ss_pred --eeecCCceEEEcCCCCceEEEEecCCCCChhhhhHhcccccCCEEEeccceEEEc----CCCCEEEeccCCCEEEeCC
Confidence 0011 02467899999998542 23332 8899999996 4678999999999999999
Q ss_pred cccCHHHHHHHHHH
Q 007728 442 DKTDEADLQKAVEN 455 (591)
Q Consensus 442 eki~e~~v~~av~~ 455 (591)
++|++.+||++|.+
T Consensus 867 ~~I~p~EIE~~L~~ 880 (994)
T PRK07868 867 GPVYTEPVTDALGR 880 (994)
T ss_pred ceEcHHHHHHHHhc
Confidence 99999999999976
No 125
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=98.83 E-value=1.1e-07 Score=104.12 Aligned_cols=43 Identities=9% Similarity=0.168 Sum_probs=39.3
Q ss_pred ccccCCEEEEccccCCCCeEEEeeecCceecccccccCHHHHHHHHHH
Q 007728 408 RYKVGDILRVAGFHNASPHFHFVRRKDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 408 RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~Geki~e~~v~~av~~ 455 (591)
.|+|||+++++ ...+.|.||.+|++++.|+++++.+||++|.+
T Consensus 333 ~~~TGD~~~~~-----~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~ 375 (458)
T PRK09029 333 WFATRDRGEWQ-----NGELTILGRLDNLFFSGGEGIQPEEIERVINQ 375 (458)
T ss_pred ccCCCCcEEEe-----CCEEEEecccccceeeCCEEeCHHHHHHHHhc
Confidence 48999999996 35799999999999999999999999999976
No 126
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=98.72 E-value=1.5e-06 Score=94.59 Aligned_cols=232 Identities=13% Similarity=0.166 Sum_probs=134.7
Q ss_pred eeEEEecCh-HHHHHHHHHHhCCCCeecccccccccccc-ccCCCCCCCCCCcee--ecCCCeEEEEEECCCCCCCCCCC
Q 007728 303 LDAVATGSM-AQYIHLLDYYSGSLPIASMLYSSSECFFG-LNLNPMCKTSEASYT--IMPNMAYFEFLLHDPGSPASTSD 378 (591)
Q Consensus 303 l~~~~~g~~-~~y~~~l~~~~~g~~v~~~~ygaSEg~~~-i~~~~~~~~~~~~~~--l~~~~~~~EFip~~~~~~~~~~~ 378 (591)
++..+.-|. +...+.+.+.| |++...+.||+|||.++ +|.+..+.+ .++. +.....=|+.|-.|...+|.-
T Consensus 359 VRla~GNGLR~diW~~Fv~RF-g~~~IgE~YgaTEgn~~~~N~d~~vGA--~G~~~~~~~~l~p~~LIk~D~~t~E~i-- 433 (649)
T KOG1179|consen 359 VRLAYGNGLRPDIWQQFVKRF-GIIKIGEFYGATEGNSNLVNYDGRVGA--CGFMSRLLKLLYPFRLIKVDPETGEPI-- 433 (649)
T ss_pred EEEEecCCCCchHHHHHHHHc-CCCeEEEEeccccCcceeeeecCcccc--ccchhhhhhhccceEEEEecCCCCcee--
Confidence 344333343 44556777889 66655599999999654 444432221 1110 111111266666664332110
Q ss_pred CCCCccccccccCCCceEEEEEc--------cccce-----------ec---------cccCCEEEEccccCCCCeEEEe
Q 007728 379 FQPPKLVDLVDVEVGKEYEPIIT--------NYTGV-----------YR---------YKVGDILRVAGFHNASPHFHFV 430 (591)
Q Consensus 379 ~~~~~~~~~~ev~~G~~yelvvT--------t~~Gl-----------yR---------Yr~GDvV~v~gf~~~~P~i~f~ 430 (591)
.++.-+. ..+++||.|.||-. .+.|+ +| |.|||+..++ .-..+-|.
T Consensus 434 -Rd~~G~C-i~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D----~~GylYF~ 507 (649)
T KOG1179|consen 434 -RDSQGLC-IPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVAD----ELGYLYFK 507 (649)
T ss_pred -ecCCceE-EECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEe----cCCcEEEe
Confidence 0011121 35688999977653 23332 23 9999999997 36789999
Q ss_pred eecCceecccccccCHHHHHHHHHHHHHhhcccCceEEeeEe-eecCCCCCceeEEEEEEeecCCCCCCChHHHHHHHHH
Q 007728 431 RRKDALLSIDYDKTDEADLQKAVENASRLLREFDTRILEYTS-YAEKKTNPGHHVIYWEILVKDPANSPTDDVLKQCCLA 509 (591)
Q Consensus 431 gR~~~~l~~~Geki~e~~v~~av~~a~~~l~~~g~~l~~f~~-~~~~~~~p~~Y~l~~E~~~~~~~~~~~~~~~~~~~~~ 509 (591)
.|.+|...-.||+++-.||++.+..... ++ . +.-|-+ ++..+++.|-=.|. .. + ...-+++++-..
T Consensus 508 DRtGDTFRWKGENVsTtEVe~~l~~~~~-~~--d--v~VYGV~VP~~EGRaGMAaI~--~~--p----~~~~d~~~l~~~ 574 (649)
T KOG1179|consen 508 DRTGDTFRWKGENVSTTEVEDVLSALDF-LQ--D--VNVYGVTVPGYEGRAGMAAIV--LD--P----TTEKDLEKLYQH 574 (649)
T ss_pred ccCCCceeecCCcccHHHHHHHHhhhcc-cc--c--eeEEEEecCCccCccceEEEE--ec--C----cccchHHHHHHH
Confidence 9999999999999999999999977432 21 1 122322 22333333322222 11 1 122356666667
Q ss_pred HHhhhCHHHHHhhhccCccCCeEEEEeCCccHHHHHHHHHhcCCCCCCCcccccc
Q 007728 510 MEESLDSAYREARVVDKTIGPLEIRLVKTGTFEELMDYAISRGASINQYKVARCV 564 (591)
Q Consensus 510 ld~~Ln~~Y~~~R~~~g~l~p~~v~~v~~gtf~~~~~~~~~~G~~~~Q~K~Pr~~ 564 (591)
+.+.| |.|+.=|. . +|-. .+=.-|||+.....+++.|-.+++++-|--+
T Consensus 575 l~~~L-P~YA~P~F-l-Rl~~---~i~~TgTFKl~K~~L~~egf~p~~~~dply~ 623 (649)
T KOG1179|consen 575 LRENL-PSYARPRF-L-RLQD---EIEKTGTFKLQKTELQKEGFNPAIISDPLYY 623 (649)
T ss_pred HHhhC-ccccchHH-H-HHHh---hhhcccchhhHHHHHHHccCCccccCCceEE
Confidence 77777 77776552 2 1211 2335699997666676779899999988754
No 127
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=98.68 E-value=2.6e-07 Score=99.74 Aligned_cols=44 Identities=20% Similarity=0.310 Sum_probs=40.2
Q ss_pred ccccCCEEEEccccCCCCeEEEeeecCceecccccccCHHHHHHHHHH
Q 007728 408 RYKVGDILRVAGFHNASPHFHFVRRKDALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 408 RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~Geki~e~~v~~av~~ 455 (591)
.|+|||++++. ....+.|+||.++++++.|+|+++.+||+++.+
T Consensus 276 ~~~tgD~g~~d----~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~ 319 (386)
T TIGR02372 276 RLDLQDRLAWD----KDGGFTILGRKDEILQVGGVNVSPGHVRDILER 319 (386)
T ss_pred eeecCceEEEc----CCCcEEEecccCCEEEECCEEEcHHHHHHHHHc
Confidence 37899999986 467899999999999999999999999999986
No 128
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=98.58 E-value=5.4e-06 Score=90.06 Aligned_cols=145 Identities=14% Similarity=0.196 Sum_probs=93.0
Q ss_pred eeEEEecCh--HHHHHHHHHHhCCCCeeccccccccccc-cccCCCCCCC-CCCceeecCCCeEEEEEECCCCCCCCCCC
Q 007728 303 LDAVATGSM--AQYIHLLDYYSGSLPIASMLYSSSECFF-GLNLNPMCKT-SEASYTIMPNMAYFEFLLHDPGSPASTSD 378 (591)
Q Consensus 303 l~~~~~g~~--~~y~~~l~~~~~g~~v~~~~ygaSEg~~-~i~~~~~~~~-~~~~~~l~~~~~~~EFip~~~~~~~~~~~ 378 (591)
|+-+++||+ ++-.+++-...=.+|+. .+||-||... +...++.+.. +..|..+ ..+.+-.++.++.+
T Consensus 404 lR~~LsGGapLS~dtQrF~nic~C~Pv~-qGYGLTEtca~~tv~e~~d~~~g~vG~pl--~c~eiKLvdw~EgG------ 474 (678)
T KOG1180|consen 404 LRYILSGGAPLSPDTQRFMNICFCCPVL-QGYGLTETCAAATVLEPEDFSTGRVGAPL--PCCEIKLVDWEEGG------ 474 (678)
T ss_pred eEEEEeCCCCCCHHHHHHHHHhcccccc-ccccccchhcccEecChhhcccccccCCc--cceEEEEEEhhhcC------
Confidence 788999996 34456655433267999 9999999643 4434443331 1111111 33455555554432
Q ss_pred CCCCccccccccCCCceEEEEEcc---ccceec-----------------cccCCEEEEccccCCCCeEEEeeecCceec
Q 007728 379 FQPPKLVDLVDVEVGKEYEPIITN---YTGVYR-----------------YKVGDILRVAGFHNASPHFHFVRRKDALLS 438 (591)
Q Consensus 379 ~~~~~~~~~~ev~~G~~yelvvTt---~~GlyR-----------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 438 (591)
+- ..+ .+ =+|||+|+- ..|+|. |+||||++++ ...+++++.|++|+++
T Consensus 475 -Y~-----~~~-~P-PrGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~WF~TGDIGe~~----pdG~LkIIDRKKdLVK 542 (678)
T KOG1180|consen 475 -YF-----AKN-KP-PRGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQRWFRTGDIGEFH----PDGCLKIIDRKKDLVK 542 (678)
T ss_pred -cc-----CCC-CC-CCceEEecCCccChhhhCChhhhhhhceecCCcEEEeccccceec----CCCcEEEeechhhhhh
Confidence 00 000 11 257999962 556663 9999999996 5779999999999976
Q ss_pred c-cccccCHHHHHHHHHHHHHhhcccCceEEeeEeeecC
Q 007728 439 I-DYDKTDEADLQKAVENASRLLREFDTRILEYTSYAEK 476 (591)
Q Consensus 439 ~-~Geki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~ 476 (591)
+ +||-|+=.-||.++... + -+.+.|+++|.
T Consensus 543 lq~GEYIsL~KvEa~l~s~-p-------~V~NICvyAd~ 573 (678)
T KOG1180|consen 543 LQNGEYISLGKVEAALRSS-P-------YVDNICVYADS 573 (678)
T ss_pred hcccceeehHHHHHHHhcC-c-------chhheEEeccc
Confidence 4 69999999999888652 1 23366788885
No 129
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.36 E-value=1.8e-05 Score=84.74 Aligned_cols=82 Identities=16% Similarity=0.301 Sum_probs=53.2
Q ss_pred cHHHHHHHHHHHHHHh-cCCChhhhhc----CCCCCCCHHHHhhcCCCcccccccHHHHHHhcCCCcccc--ccccccee
Q 007728 32 NAATFQETVLAEILSR-NANSEYLQRY----KLGGATDRETFKLKLPVITYEDIKPDIQRMADGDRSAVL--LASPISEF 104 (591)
Q Consensus 32 ~~~~~Q~~~L~~iL~~-~~~t~ygr~~----gf~~i~s~edf~~~vPl~~Yed~~p~ier~~~Ge~~~ll--~~~pi~~f 104 (591)
+-++...+.++++.+. .++++.||++ |++ .+++++. .+|..--+-++. . .|. +.+.+...
T Consensus 28 e~~~l~~~~~~~~~~~q~~~~~~Yr~~~~~~~~~--~~v~~~~-dIP~lPi~~FK~--~--------~L~S~~~e~~~~~ 94 (365)
T PF04443_consen 28 EKEELFLALALELFRYQYEHNPPYRKYCDALGFD--EDVKDLE-DIPFLPIRFFKE--H--------ELLSVPEEEVEKV 94 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCC--cccccHH-HCCcchHHHHhh--c--------eeeecChhhheeE
Confidence 3445556677777776 5899999987 565 4555553 577665555553 1 222 23557688
Q ss_pred ecccccCCCccccccCChHHHHH
Q 007728 105 LKSSGTSSGEQKLFPSTQEELDR 127 (591)
Q Consensus 105 ~~TSGTT~G~~K~iP~T~~~l~~ 127 (591)
..||||| |.+-.|...+.....
T Consensus 95 ~tSSGTt-G~~S~i~~D~~t~~~ 116 (365)
T PF04443_consen 95 FTSSGTT-GQPSRIFRDRETAER 116 (365)
T ss_pred EECCCCC-CCCcEEEECHHHHHH
Confidence 9999999 776677777665544
No 130
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.46 E-value=0.0036 Score=71.83 Aligned_cols=133 Identities=20% Similarity=0.303 Sum_probs=79.8
Q ss_pred CCceeeEEEecCh---HHHHHHHHHHhC-CCCeeccccccccccccccCCCCCCCCC----CceeecCCCeEEEEEECCC
Q 007728 299 NTKYLDAVATGSM---AQYIHLLDYYSG-SLPIASMLYSSSECFFGLNLNPMCKTSE----ASYTIMPNMAYFEFLLHDP 370 (591)
Q Consensus 299 ~l~~l~~~~~g~~---~~y~~~l~~~~~-g~~v~~~~ygaSEg~~~i~~~~~~~~~~----~~~~l~~~~~~~EFip~~~ 370 (591)
....++.+.+||. .....++....+ ...+. +.||.||+.+............ .+.. .++..++ |. +.
T Consensus 483 ~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~-~~ygpTe~~~~~~~~~~~~~~~~~~piG~p-~~n~~~~--il-d~ 557 (642)
T COG1020 483 PCERLRQLLSGGEALPLALVQRLLQLAALARRLL-NLYGPTEATLDAPSFPISAELESRVPIGRP-VANTQLY--IL-DQ 557 (642)
T ss_pred CcccccEEEEcCCCCCHHHHHHHHHhccccceEe-eccCccHHhhheeeEEcccccCCCCCccee-eCCCeEE--EE-CC
Confidence 3334688888883 233444443332 24455 9999999644332211111111 1121 1222222 11 11
Q ss_pred CCCCCCCCCCCCccccccccCCCceEEEEEcc---cccee--------------ccccCCEEEEccccCCCCeEEEeeec
Q 007728 371 GSPASTSDFQPPKLVDLVDVEVGKEYEPIITN---YTGVY--------------RYKVGDILRVAGFHNASPHFHFVRRK 433 (591)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~ev~~G~~yelvvTt---~~Gly--------------RYr~GDvV~v~gf~~~~P~i~f~gR~ 433 (591)
. ...+..|..+|+.++- ..|++ .|+|||+++. .....++|+||.
T Consensus 558 ~---------------~~~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~----~~dg~~e~lgr~ 618 (642)
T COG1020 558 G---------------LRPLPLGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARP----LADGALEYLGRK 618 (642)
T ss_pred C---------------CCcCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeE----CCCCeEEEeccc
Confidence 1 1245668889999974 23322 3999999994 356799999999
Q ss_pred CceecccccccCHHHHHHHHHH
Q 007728 434 DALLSIDYDKTDEADLQKAVEN 455 (591)
Q Consensus 434 ~~~l~~~Geki~e~~v~~av~~ 455 (591)
+..+++.|..|-..+|+.++..
T Consensus 619 D~qvki~g~Riel~eie~~l~~ 640 (642)
T COG1020 619 DSQVKIRGFRIELGEIEAALAE 640 (642)
T ss_pred cceeEeceEecCcHHHHHHHhc
Confidence 9999999999988999887753
No 131
>PTZ00297 pantothenate kinase; Provisional
Probab=96.50 E-value=0.07 Score=66.62 Aligned_cols=54 Identities=11% Similarity=0.120 Sum_probs=38.6
Q ss_pred eEEEEEccccceec--cccCCEEEEccccCCCCeEEEeeecCceecc-cccccCHHHHHHHHHH
Q 007728 395 EYEPIITNYTGVYR--YKVGDILRVAGFHNASPHFHFVRRKDALLSI-DYDKTDEADLQKAVEN 455 (591)
Q Consensus 395 ~yelvvTt~~GlyR--Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~-~Geki~e~~v~~av~~ 455 (591)
.|||++. .++ =.|+++ +.|+. ....+.|+||.++++.. .||+|.++.||+++..
T Consensus 825 ~GEIlvr----~~kdpe~T~e~--~~gW~-~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~ 881 (1452)
T PTZ00297 825 IGQLVLA----KKGEPRRTLPI--AAQWK-RDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQ 881 (1452)
T ss_pred CCeEEEE----ECCChHHHHHh--hCcCc-cCCeEEEEeccccceECCCCcEEcHHHHHHHHhc
Confidence 4788883 111 225553 24553 45799999999999665 4899999999999854
No 132
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=95.23 E-value=0.061 Score=46.30 Aligned_cols=84 Identities=15% Similarity=0.169 Sum_probs=50.9
Q ss_pred ccccCHHHHHHHHHHHHHhhcccCceEEeeEeeecCCCCCceeEEEEEEeecCCCCCCChHHHHHHHHHHHhhhCHHHHH
Q 007728 441 YDKTDEADLQKAVENASRLLREFDTRILEYTSYAEKKTNPGHHVIYWEILVKDPANSPTDDVLKQCCLAMEESLDSAYRE 520 (591)
Q Consensus 441 Geki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~p~~Y~l~~E~~~~~~~~~~~~~~~~~~~~~ld~~Ln~~Y~~ 520 (591)
|.+++|.+|+++|.+. + ++. .+|.+..+....--+..+.+|.. +. ...+....+.+++.|.++|
T Consensus 1 GvnvfP~~Ie~vl~~~-~-----~~~-~~y~i~v~~~~~~D~l~v~vE~~--~~-~~~~~~~~~~l~~~i~~~l------ 64 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREF-P-----EVS-PEYQIVVTREGGLDELTVRVELR--PG-FSDDAEDLEALAERIAERL------ 64 (96)
T ss_dssp TEEE-HHHHHHHHCTS-T-----TEE-EEEEEEEEEETTEEEEEEEEEES--TT-CCTTHHHHHHHHHHHHHHH------
T ss_pred CcEECHHHHHHHHHhC-c-----CCC-CcEEEEEEcCCCCcEEEEEEEEC--Cc-cCcchHHHHHHHHHHHHHH------
Confidence 7899999999999874 2 222 27876655322222444666664 21 1122356777888888888
Q ss_pred hhhccCccCCeEEEEeCCccHHH
Q 007728 521 ARVVDKTIGPLEIRLVKTGTFEE 543 (591)
Q Consensus 521 ~R~~~g~l~p~~v~~v~~gtf~~ 543 (591)
|+..| +.| +|.+|++|++.+
T Consensus 65 -k~~lg-v~~-~V~lv~~gtLpr 84 (96)
T PF14535_consen 65 -KERLG-VRP-EVELVPPGTLPR 84 (96)
T ss_dssp -HHHHS-S-E-EEEEE-TT-S--
T ss_pred -HhhcC-ceE-EEEEECCCCccC
Confidence 66664 665 999999999997
No 133
>PRK09188 serine/threonine protein kinase; Provisional
Probab=89.13 E-value=0.48 Score=50.95 Aligned_cols=39 Identities=15% Similarity=0.128 Sum_probs=32.7
Q ss_pred ccccCCEEEEccccCCCCeEEEeeecCceecccc---cccCHHHHHHHHHH
Q 007728 408 RYKVGDILRVAGFHNASPHFHFVRRKDALLSIDY---DKTDEADLQKAVEN 455 (591)
Q Consensus 408 RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~G---eki~e~~v~~av~~ 455 (591)
-|+|||++++.+ ....+.|+||.+ +| |+|++. ||+++.+
T Consensus 210 W~~TGDlg~~~d---~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~ 251 (365)
T PRK09188 210 WLATGKKVYNFI---TRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKS 251 (365)
T ss_pred EEeCCCEEEEEc---CCCeEEEEecCc-----CCcCceeeCHH-HHHHHHh
Confidence 489999999731 466899999997 78 899999 9998876
No 134
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=64.37 E-value=4.5 Score=48.92 Aligned_cols=45 Identities=20% Similarity=0.197 Sum_probs=40.3
Q ss_pred ccccCCEEEEccccCCCCeEEEeeecCceecccccccCHHHHHHHHHHH
Q 007728 408 RYKVGDILRVAGFHNASPHFHFVRRKDALLSIDYDKTDEADLQKAVENA 456 (591)
Q Consensus 408 RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~~~Geki~e~~v~~av~~a 456 (591)
+|||||.++.. +..-++|.||.++.++++|-++.=.+|..++..-
T Consensus 455 ~y~tgD~gr~l----~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~~~ 499 (1032)
T KOG1178|consen 455 IYRTGDNGRSL----KNGGLEISGRADRQIKDRGVRIELGELNTVVEVH 499 (1032)
T ss_pred cccccccceee----cCCCEEEEEeccceEEEccEEEehhhhchhhccC
Confidence 39999999986 3668999999999999999999999999988774
No 135
>COG2139 RPL21A Ribosomal protein L21E [Translation, ribosomal structure and biogenesis]
Probab=39.08 E-value=22 Score=30.52 Aligned_cols=37 Identities=24% Similarity=0.511 Sum_probs=26.2
Q ss_pred eeccccCCEEEEc---cccCCCCeEEEeeecCceeccccc
Q 007728 406 VYRYKVGDILRVA---GFHNASPHFHFVRRKDALLSIDYD 442 (591)
Q Consensus 406 lyRYr~GDvV~v~---gf~~~~P~i~f~gR~~~~l~~~Ge 442 (591)
|.-|..||.|-++ +++...|-=+|.||++.++...|.
T Consensus 30 l~ey~~Gd~V~I~IdpSv~kGmPh~rf~G~TG~Vvg~~g~ 69 (98)
T COG2139 30 LQEYKVGDKVHIDIDPSVHKGMPHPRFQGKTGTVVGVRGR 69 (98)
T ss_pred HhhccCCCEEEEEeCcccccCCCCccccCcceEEEeccCC
Confidence 4458888888766 455667777788888877766664
No 136
>cd04931 ACT_PAH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe. In PAH, an autoregulatory sequence, N-terminal of the ACT domain, extends across the catalytic domain active site and regulates the enzyme by intrasteric regulation. It appears that the activation by L-Phe induces a conformational change that converts the enzyme to a high-affinity and high-activity state. Modulation of activity is achieved through inhibition by BH4 and activation by phosphorylation of serine residues of the autoregulatory region. The molecular basis for the cooperative activation process is not fully understood yet. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=33.70 E-value=2e+02 Score=24.39 Aligned_cols=40 Identities=15% Similarity=0.120 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHhhcccCceEEeeEeeecCCCCCceeEEEEEEe
Q 007728 446 EADLQKAVENASRLLREFDTRILEYTSYAEKKTNPGHHVIYWEIL 490 (591)
Q Consensus 446 e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~p~~Y~l~~E~~ 490 (591)
+..+..++..+. ..|+-+...-..+. ...++.|.+|++++
T Consensus 25 pGsL~~vL~~Fa----~~~INLt~IeSRP~-~~~~~~Y~FfVDie 64 (90)
T cd04931 25 VGALAKVLRLFE----EKDINLTHIESRPS-RLNKDEYEFFINLD 64 (90)
T ss_pred CcHHHHHHHHHH----HCCCCEEEEEeccC-CCCCceEEEEEEEE
Confidence 445767776664 36777766655543 33567999999997
No 137
>PF01797 Y1_Tnp: Transposase IS200 like; InterPro: IPR002686 Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This entry represents a domain found in transposases for IS200 from Escherichia coli []. More information about these proteins can be found at Protein of the Month: Transposase [].; GO: 0003677 DNA binding, 0004803 transposase activity, 0006313 transposition, DNA-mediated; PDB: 2F5G_B 2F4F_B 2EC2_F 2XM3_C 2XQC_D 2XO6_A 2XMA_E 2VJV_B 2VIH_B 2VJU_A ....
Probab=33.00 E-value=1.4e+02 Score=25.90 Aligned_cols=101 Identities=11% Similarity=0.167 Sum_probs=54.0
Q ss_pred EeeecCceecccccccCHHHHHHHHHHHHHhhcccCceEEeeEeeecCCCCCceeEEEEEEeecCCCCCCChHHHHHHHH
Q 007728 429 FVRRKDALLSIDYDKTDEADLQKAVENASRLLREFDTRILEYTSYAEKKTNPGHHVIYWEILVKDPANSPTDDVLKQCCL 508 (591)
Q Consensus 429 f~gR~~~~l~~~Geki~e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~p~~Y~l~~E~~~~~~~~~~~~~~~~~~~~ 508 (591)
++-|.+.--.+..+. ..+.+.+.+...+. +.++++.+|++.+| |+++.+++. +. . .+.++..
T Consensus 8 iv~~~~~r~~~~~~~-~~~~l~~~l~~~~~---~~~~~i~~~~vm~n------HvHllv~~~--~~---~---~is~~~~ 69 (121)
T PF01797_consen 8 IVFRTKYRRPLFNDE-IREALLEILREICE---EYGIEIIAFVVMPN------HVHLLVSIP--PK---Q---SISKFMQ 69 (121)
T ss_dssp EEEEBGGGTSSSSHH-HHHHHHHHHHHHHH---HTTEEEEEEEEETT------EEEEEEEE---TT---S----HHHHHH
T ss_pred EEEeeeCCEeeeehh-eeeeeeeccccccc---cccceeeeecccCc------ccceeeeec--cc---c---cchheee
Confidence 344444333344444 45567777777654 46899999998544 999999884 21 1 2333344
Q ss_pred HHHh----hhCHHHHHhhhc-c--Ccc--CCeEEEEeCCccHHHHHHH
Q 007728 509 AMEE----SLDSAYREARVV-D--KTI--GPLEIRLVKTGTFEELMDY 547 (591)
Q Consensus 509 ~ld~----~Ln~~Y~~~R~~-~--g~l--~p~~v~~v~~gtf~~~~~~ 547 (591)
.+.. .+|..|...... . |.+ ..--...+.+..+....++
T Consensus 70 ~lK~~~s~~~~k~~~~~~~~~~~~~~~Wq~~y~~~~i~~~~~~~~~~Y 117 (121)
T PF01797_consen 70 RLKGRSSRWINKEFPELKKRYFWRGHFWQRGYFDRSIRNESLDNVIRY 117 (121)
T ss_dssp HHHHHHHHHHHHHTHHHHHSCCT-TSSBESEEEEEEEBSSBHHHHHHH
T ss_pred cccccccccccccccceecccccccccccCCeEEEEECChhHHHHHHH
Confidence 4433 335444443211 1 111 2345666666676666554
No 138
>PRK04306 50S ribosomal protein L21e; Reviewed
Probab=31.73 E-value=31 Score=29.94 Aligned_cols=36 Identities=17% Similarity=0.322 Sum_probs=25.5
Q ss_pred eccccCCEEEEcc---ccCCCCeEEEeeecCceeccccc
Q 007728 407 YRYKVGDILRVAG---FHNASPHFHFVRRKDALLSIDYD 442 (591)
Q Consensus 407 yRYr~GDvV~v~g---f~~~~P~i~f~gR~~~~l~~~Ge 442 (591)
--|+.||+|-+.. ++...|.=.|.||++-++++.|.
T Consensus 33 ~~y~~Gd~V~I~~d~sv~kGmPh~~yhGkTG~V~~v~~~ 71 (98)
T PRK04306 33 QEFEEGDKVHIVIDPSVHKGMPHPRFHGKTGTVVGKRGR 71 (98)
T ss_pred HhccCCCEEEEEecCceecCCccccccCCCEEEEeecCe
Confidence 3488888887764 33566666788888877777664
No 139
>PF07311 Dodecin: Dodecin; InterPro: IPR009923 This entry represents proteins with a Dodecin-like topology. Dodecin flavoprotein is a small dodecameric flavin-binding protein from Halobacterium salinarium (Halobacterium halobium) that contains two flavins stacked in a single binding pocket between two tryptophan residues to form an aromatic tetrade []. Dodecin binds riboflavin, although it appears to have a broad specificity for flavins. Lumichrome, a molecule associated with flavin metabolism, appears to be a ligand of dodecin, which could act as a waste-trapping device. ; PDB: 2VYX_L 2DEG_F 2V18_K 2V19_D 2UX9_B 2CZ8_E 2V21_F 2CC8_A 2CCB_A 2VX9_A ....
Probab=31.26 E-value=1.6e+02 Score=23.59 Aligned_cols=48 Identities=23% Similarity=0.144 Sum_probs=33.8
Q ss_pred ccCHHHHHHHHHHHHHhhcc-cCceEEeeEeeecCCCCCceeEEEEEEee
Q 007728 443 KTDEADLQKAVENASRLLRE-FDTRILEYTSYAEKKTNPGHHVIYWEILV 491 (591)
Q Consensus 443 ki~e~~v~~av~~a~~~l~~-~g~~l~~f~~~~~~~~~p~~Y~l~~E~~~ 491 (591)
+=.|+.+++||.+|++.++. .++++.+.....+. +.-.||.+-+++.+
T Consensus 14 ~S~edAv~~Av~~A~kTl~ni~~~eV~e~~~~v~d-g~i~~y~v~lkv~F 62 (66)
T PF07311_consen 14 KSWEDAVQNAVARASKTLRNIRWFEVKEQRGHVED-GKITEYQVNLKVSF 62 (66)
T ss_dssp SHHHHHHHHHHHHHHHHSSSEEEEEEEEEEEEEET-TCEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHhhchhCcEEEEEEEEEEEEeC-CcEEEEEEEEEEEE
Confidence 44588999999999998853 25667777665544 34458988777754
No 140
>PF11454 DUF3016: Protein of unknown function (DUF3016); InterPro: IPR021557 This is a bacterial family of uncharacterised proteins.
Probab=30.66 E-value=1e+02 Score=28.56 Aligned_cols=55 Identities=15% Similarity=0.200 Sum_probs=36.2
Q ss_pred cCCCceEEEEEcc--ccceecc----ccCCEEEEccccCCCCeEEEeeec----CceecccccccCH
Q 007728 390 VEVGKEYEPIITN--YTGVYRY----KVGDILRVAGFHNASPHFHFVRRK----DALLSIDYDKTDE 446 (591)
Q Consensus 390 v~~G~~yelvvTt--~~GlyRY----r~GDvV~v~gf~~~~P~i~f~gR~----~~~l~~~Geki~e 446 (591)
|.+|+.-+|.||. .+|-+++ ..+|+=.|.+ -..|+|.|.+.. +.+|.-+-||++.
T Consensus 47 Lp~gq~L~v~VtDvDLAG~~~P~~~~~~~dvRvvkd--i~pPRI~l~Y~L~d~~G~vi~~g~e~L~D 111 (141)
T PF11454_consen 47 LPPGQTLEVTVTDVDLAGDVEPFWGSGANDVRVVKD--IYPPRIELSYTLTDADGKVIKQGEEKLKD 111 (141)
T ss_pred CCCCCEEEEEEEecccCcccccCcCCCCCcEEEEcc--CCCCcEEEEEEEECCCCcEEEecceEEec
Confidence 7899999999996 6887765 5566644444 457888877763 3334333345544
No 141
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=29.47 E-value=52 Score=25.22 Aligned_cols=19 Identities=21% Similarity=0.726 Sum_probs=14.4
Q ss_pred cccCCEEEEccccCCCCeEEEe
Q 007728 409 YKVGDILRVAGFHNASPHFHFV 430 (591)
Q Consensus 409 Yr~GDvV~v~gf~~~~P~i~f~ 430 (591)
|.+||+|+..+ ..|.+.+.
T Consensus 1 f~~GDvV~LKS---GGp~MTV~ 19 (53)
T PF09926_consen 1 FKIGDVVQLKS---GGPRMTVT 19 (53)
T ss_pred CCCCCEEEEcc---CCCCeEEE
Confidence 68999999985 67765544
No 142
>PTZ00189 60S ribosomal protein L21; Provisional
Probab=29.46 E-value=33 Score=32.34 Aligned_cols=35 Identities=20% Similarity=0.384 Sum_probs=24.6
Q ss_pred ccccCCEEEEcc---ccCCCCeEEEeeecCceeccccc
Q 007728 408 RYKVGDILRVAG---FHNASPHFHFVRRKDALLSIDYD 442 (591)
Q Consensus 408 RYr~GDvV~v~g---f~~~~P~i~f~gR~~~~l~~~Ge 442 (591)
-|+.||+|-+.+ .+.+.|.=.|.||++-+.|+.|.
T Consensus 33 ~yk~GD~VdIk~d~svqkGMPhk~YHGkTG~V~nv~~~ 70 (160)
T PTZ00189 33 TFKVGDYVDIVVDSAVHKGMPYKYYHGRTGRVFNVTPR 70 (160)
T ss_pred HccCCCEEEEEecCCeecCCCcccccCCCeEEEeecCe
Confidence 388888887764 44567766778888777766653
No 143
>PLN00190 60S ribosomal protein L21; Provisional
Probab=23.81 E-value=48 Score=31.23 Aligned_cols=36 Identities=22% Similarity=0.438 Sum_probs=26.8
Q ss_pred eccccCCEEEEcc---ccCCCCeEEEeeecCceeccccc
Q 007728 407 YRYKVGDILRVAG---FHNASPHFHFVRRKDALLSIDYD 442 (591)
Q Consensus 407 yRYr~GDvV~v~g---f~~~~P~i~f~gR~~~~l~~~Ge 442 (591)
.-|+.||+|-+.+ ++.+.|.=.|.||++-+.|+.|.
T Consensus 32 ~~yk~GD~VdIk~~~svqKGMPhk~YHGkTG~V~nv~~~ 70 (158)
T PLN00190 32 RTFKVGDYVDIKVNGAIHKGMPHKFYHGRTGIVWNVTKR 70 (158)
T ss_pred HHhcCCCEEEEEecCCeecCCCcccccCCCeEEEeecCc
Confidence 3488999988774 44567777888888888777664
No 144
>cd04866 LigD_Pol_like_3 LigD_Pol_like_3: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD, subgroup 3. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. It has been suggested that LigD Pol contributes to NHEJ-mediated repair DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase domain, resulting in short stretches of RNA incorporated into the genomic DNA. The Pol domains of PaeLigD and Mycobacterium tuberculosis (Mt)LigD are stimulated by manganese, are error-prone, and prefer adding rNTPs to dNTPs in vitro; however PaeLigD and MtLigD belong to other subgroups, proteins in this subgroup await functional characterization.
Probab=22.21 E-value=55 Score=32.73 Aligned_cols=50 Identities=22% Similarity=0.405 Sum_probs=31.2
Q ss_pred cccccccceeecccccCCCccccccCC-hH-HHHHHHHHHHHHHHHHhccCCC
Q 007728 95 VLLASPISEFLKSSGTSSGEQKLFPST-QE-ELDRRHFQISLLRAVMNRCVPD 145 (591)
Q Consensus 95 ll~~~pi~~f~~TSGTT~G~~K~iP~T-~~-~l~~~~~~~~~~~~~~~~~~p~ 145 (591)
+|..-.+..|.+|||.+ |-.-++|.. .. ..+....+....+..+.+..|+
T Consensus 121 ~L~~lgL~~f~KTSG~k-GlHV~vPl~~~~~~~~~~r~fa~~iA~~l~~~~P~ 172 (223)
T cd04866 121 ILDALGLTSFVKTSGNK-GLQVYIPLPDNKFTYDETRLFTEFIAEYLCQQFPE 172 (223)
T ss_pred HHHHcCCccceEccCCC-eEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHCch
Confidence 34445567899999999 899999998 32 2233222223334455556664
No 145
>COG5475 Uncharacterized small protein [Function unknown]
Probab=21.62 E-value=99 Score=23.91 Aligned_cols=24 Identities=13% Similarity=0.418 Sum_probs=19.5
Q ss_pred cccCCEEEEccccCCCCeEEEeeecCc
Q 007728 409 YKVGDILRVAGFHNASPHFHFVRRKDA 435 (591)
Q Consensus 409 Yr~GDvV~v~gf~~~~P~i~f~gR~~~ 435 (591)
|.|||+|++.. ..|++.+.+=..|
T Consensus 5 FstgdvV~lKs---GGP~Mtvs~~ss~ 28 (60)
T COG5475 5 FSTGDVVTLKS---GGPRMTVSGYSSD 28 (60)
T ss_pred eecCcEEEeec---CCceEEEeccccC
Confidence 68999999984 7898888776653
No 146
>PRK11899 prephenate dehydratase; Provisional
Probab=21.24 E-value=5.5e+02 Score=26.59 Aligned_cols=41 Identities=20% Similarity=0.114 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHhhcccCceEEeeEeeecCCCCCceeEEEEEEee
Q 007728 446 EADLQKAVENASRLLREFDTRILEYTSYAEKKTNPGHHVIYWEILV 491 (591)
Q Consensus 446 e~~v~~av~~a~~~l~~~g~~l~~f~~~~~~~~~p~~Y~l~~E~~~ 491 (591)
+..+-++|..+.. .|+-|.-.-+.+ ....++.|++|+|++.
T Consensus 205 pGaL~~vL~~Fa~----~gINLtkIeSRP-~~~~~~~Y~F~id~eg 245 (279)
T PRK11899 205 PAALYKALGGFAT----NGVNMTKLESYM-VGGSFTATQFYADIEG 245 (279)
T ss_pred CChHHHHHHHHHH----cCCCeeeEEeee-cCCCCceEEEEEEEEC
Confidence 4567777777653 576666555554 3347889999999983
Done!