Your job contains 1 sequence.
>007729
MNKGTKNSQAEVEAAAGGSDVRFTVQPERELQANWEVDLAKKLEDYLLKICSGQVTASES
LDSISVNFAEAALLVQGSVQVYSRKVEYLYNLVLHTLEFISQKSQQDQIEGTPVQAEESG
SHAVAGEENDFFWGFDDVPVEVKNCLDSPNGKDTSLNLFVKPPANLVVLEGDCLDTVGDG
TELESYLLATSDLYRDFILLDTYDSVAVDDFLEGDEVCKGPNDVYRGSSTRKSFQSPTRR
SGGTAHKSSLAKNKDVNLPASPRVACGFDVGPNPPVNDNFGENYHGFDMDDNYSEPRDFD
NSDDEDDPWKPLNPHEPGNLKVKPFRKVKTFRRNGVKSAKRISISTIFPLAKLRGTISPE
LTEIWEARHKCFEEQRASQPPSLYEKLRQSLADEGHETFDAFANPGCYEDKGYDSGDPDI
GHPDFDMPDGMYMDEDVPLQHDKHDDGPAPFEPNEAFEHGSQDSHANLEDLCRSHLDALL
ANIAETEKQTELAARVSSWKQKIENNLDEQVTYCFTPFYPESSYISLSSTFNFITFVCLS
FKLVYGLLIVEFLIFYRIRTLHLIFMNMEKVLLISYHLKETMEISHPLLML
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007729
(591 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2089298 - symbol:HEB2 "hypersensitive to exces... 1323 4.7e-135 1
UNIPROTKB|Q6IBW4 - symbol:NCAPH2 "Condensin-2 complex sub... 218 6.7e-20 3
ZFIN|ZDB-GENE-041210-172 - symbol:ncaph2 "non-SMC condens... 265 9.8e-20 1
MGI|MGI:1289164 - symbol:Ncaph2 "non-SMC condensin II com... 218 3.0e-19 2
UNIPROTKB|Q3SZL8 - symbol:NCAPH2 "Condensin-2 complex sub... 212 2.8e-17 2
RGD|1565937 - symbol:Ncaph2 "non-SMC condensin II complex... 167 1.2e-11 2
WB|WBGene00016202 - symbol:kle-2 species:6239 "Caenorhabd... 129 0.00014 2
UNIPROTKB|P34341 - symbol:kle-2 "Kleisin, abnormal closur... 129 0.00014 2
>TAIR|locus:2089298 [details] [associations]
symbol:HEB2 "hypersensitive to excess boron 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0000793 "condensed chromosome" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045739 "positive
regulation of DNA repair" evidence=IMP] [GO:2001022 "positive
regulation of response to DNA damage stimulus" evidence=IMP]
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0030261
GO:GO:0000793 GO:GO:0045739 EMBL:AB022217 EMBL:AB193291
EMBL:AK226817 IPI:IPI00525183 RefSeq:NP_188295.2 UniGene:At.53340
PaxDb:Q9LUR0 PRIDE:Q9LUR0 EnsemblPlants:AT3G16730.1 GeneID:820925
KEGG:ath:AT3G16730 TAIR:At3g16730 eggNOG:NOG238357
HOGENOM:HOG000084396 InParanoid:Q9LUR0 KO:K11490 OMA:EVSVCRS
PhylomeDB:Q9LUR0 ProtClustDB:CLSN2696784 Genevestigator:Q9LUR0
InterPro:IPR009378 Pfam:PF06278 Uniprot:Q9LUR0
Length = 683
Score = 1323 (470.8 bits), Expect = 4.7e-135, P = 4.7e-135
Identities = 285/509 (55%), Positives = 352/509 (69%)
Query: 17 GGSDVR----FTVQPERELQANWEVDLAKKLEDYLLKICSGQVTASESLDSISVNFAEAA 72
GG +VR TVQPER+L ANWEVDL++KLE+YLLKICSG++T +E I VNFAEAA
Sbjct: 5 GGGEVRGERIHTVQPERDLVANWEVDLSEKLEEYLLKICSGEITGNEEDGQIPVNFAEAA 64
Query: 73 LLVQGSVQVYSRKVEYLYNLVLHTLEFISQKSQQDQIEGTPVQAEESGSHAVAGEENDFF 132
LL+QGSVQVYS+KVEYLYNLVL TLEF+S++ Q+Q +GT + E S S V EEND F
Sbjct: 65 LLLQGSVQVYSKKVEYLYNLVLRTLEFLSKQRDQEQSKGTSNENEASSSRQVDEEENDLF 124
Query: 133 WGFDDVPVEVKNCLDSPNGKDTSLNLFVKPPANLVVLEGDCLDTVGDGTELESYLLATSD 192
W DD+PV+ KN LDS G DT + FVKPPANLVVLEGDCLDT GDG ELESYLLAT+
Sbjct: 125 WNVDDIPVDTKNRLDSSVGGDTCPSQFVKPPANLVVLEGDCLDTSGDGGELESYLLATTH 184
Query: 193 LYRDFILLDTYDSVAVDDFLEGDEVCKGPNDVYRGSSTRKSFQSPTRRSGGTAHKSSLAK 252
LYRDFILLD D+VAV++FL + KG N +RGSS RKSF S RSGG+A KSS+ K
Sbjct: 185 LYRDFILLDPCDAVAVNEFLGDNYGGKGRNSAHRGSSVRKSFHSSVGRSGGSARKSSVGK 244
Query: 253 NKDVNLPASPRVACG-----FDVGPNPPVNDNFGENYHGFDMDDNYSEPRDFDNSD-DED 306
N+ N+ SP G D G PPV F +N HGFDMD+ Y DF ++D DED
Sbjct: 245 NQGTNVHLSPICGNGPNDQNCDQGSQPPV---FEDNDHGFDMDNEYGGAMDFSDTDADED 301
Query: 307 DPWKPLNPHEPGNLKVKPFRKVKTFRRNGVKSAKRISISTIFPLAKLRGTISPELTEIWE 366
DPWKPLNP+EPG LKVKPF+KVK ++ G K ++++FPLA+ G IS EL EIW+
Sbjct: 302 DPWKPLNPYEPGKLKVKPFKKVKILKKIGWSITKD-HMTSMFPLARPNGPISSELIEIWK 360
Query: 367 ARHKCF-EEQRASQPPSLYEKLRQSLADEGHETFDAFANPGCYEDKGYD---SGD-PDIG 421
H C ++++ASQ YEKLR+ L + G++ A N + +D +GD D G
Sbjct: 361 M-HGCASKDEQASQDIPYYEKLREMLVNGGNQPCGANGNYNDNDKDNHDEANNGDFHDFG 419
Query: 422 HPDFDMPDGMYMDEDVPLQHDKHDDGPAPFEPNEAFEHGSQDSHANLEDLCRSHLDALLA 481
D D + +MDEDV + +D G A F + FE+G + +LEDLCRSHLDALLA
Sbjct: 420 EHDGDDAEHPFMDEDVL---NMNDGGAAEFHNYDGFENGESNCQESLEDLCRSHLDALLA 476
Query: 482 NIAETEKQTELAARVSSWKQKIENNLDEQ 510
NIA++EKQT+LAARVS+WKQKIE NL+EQ
Sbjct: 477 NIAKSEKQTDLAARVSTWKQKIEQNLEEQ 505
>UNIPROTKB|Q6IBW4 [details] [associations]
symbol:NCAPH2 "Condensin-2 complex subunit H2" species:9606
"Homo sapiens" [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] GO:GO:0005634 GO:GO:0005694 EMBL:CH471138
GO:GO:0030261 EMBL:U62317 eggNOG:NOG238357 KO:K11490 OMA:EVSVCRS
InterPro:IPR009378 Pfam:PF06278 CTD:29781 HOVERGEN:HBG098083
OrthoDB:EOG408N7P EMBL:AL021682 EMBL:CR456604 EMBL:BC000473
EMBL:BC001509 EMBL:BC001833 EMBL:BC001937 EMBL:BC009441
EMBL:BC014939 IPI:IPI00745556 IPI:IPI00853120 IPI:IPI00853264
IPI:IPI00889043 RefSeq:NP_001171940.1 RefSeq:NP_055366.3
RefSeq:NP_689512.2 UniGene:Hs.730607 ProteinModelPortal:Q6IBW4
IntAct:Q6IBW4 MINT:MINT-4329914 STRING:Q6IBW4 PhosphoSite:Q6IBW4
DMDM:74709496 PaxDb:Q6IBW4 PRIDE:Q6IBW4 DNASU:29781
Ensembl:ENST00000299821 Ensembl:ENST00000395698
Ensembl:ENST00000420993 GeneID:29781 KEGG:hsa:29781 UCSC:uc003blq.4
UCSC:uc003blr.4 UCSC:uc003blx.4 GeneCards:GC22P050946
H-InvDB:HIX0016615 HGNC:HGNC:25071 MIM:611230 neXtProt:NX_Q6IBW4
PharmGKB:PA162397314 GenomeRNAi:29781 NextBio:52312
ArrayExpress:Q6IBW4 Bgee:Q6IBW4 CleanEx:HS_NCAPH2
Genevestigator:Q6IBW4 Uniprot:Q6IBW4
Length = 605
Score = 218 (81.8 bits), Expect = 6.7e-20, Sum P(3) = 6.7e-20
Identities = 59/147 (40%), Positives = 83/147 (56%)
Query: 20 DVRFT--VQPERELQANWEVDLAKKLEDYLLKICSGQVTASESLDSISVNFAEAALLVQG 77
+ RF +QP R+L NWEVD+A +L +YL ++ Q+ S ++NF EAALL+QG
Sbjct: 5 EARFAHLLQPIRDLTKNWEVDVAAQLGEYLEEL--DQICISFDEGKTTMNFIEAALLIQG 62
Query: 78 SVQVYSRKVEYLYNLVLHTLEFISQKSQQDQIEGTPVQAEESGSHAVAG----EENDFFW 133
S VYS+KVEYLY+LV L+FIS K + Q+ VQ + + A +G EN+F
Sbjct: 63 SACVYSKKVEYLYSLVYQALDFISGKRRAKQLSS--VQEDRANGVASSGVPQEAENEFL- 119
Query: 134 GFDDVPVEVKNCLDSPNGKDTSLNLFV 160
DD P N +D N + S L +
Sbjct: 120 SLDDFPDSRTN-VDLKNDQTPSEVLII 145
Score = 82 (33.9 bits), Expect = 6.7e-20, Sum P(3) = 6.7e-20
Identities = 25/99 (25%), Positives = 46/99 (46%)
Query: 448 PAPFEPNEAFEHGSQDSHANLEDLCRSHLDALLANIAETEKQTELAARVSSWKQKIENNL 507
P +P EA + + + E+L R +++ +A + ++TEL+ R+ W+ ++ L
Sbjct: 447 PEGADPREAADLDAVPMSLSYEELVRRNVELFIATSQKFVQETELSQRIRDWEDTVQPLL 506
Query: 508 DEQVTYCFTPFYPESSYISLSSTFNFITFVCLSFKLVYG 546
EQ + PF + L S F + C +LV G
Sbjct: 507 QEQEQH--VPFDIHTYGDQLVSRFPQLNEWCPFAELVAG 543
Score = 56 (24.8 bits), Expect = 6.7e-20, Sum P(3) = 6.7e-20
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 307 DPWKPLNPHEPGNLKVKPFRKVKTF 331
DPW+ L+P + +L+ KPF+K + +
Sbjct: 315 DPWQSLDPFD--SLESKPFKKGRPY 337
Score = 37 (18.1 bits), Expect = 5.9e-18, Sum P(3) = 5.9e-18
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 204 DSVAVDDFLEGDE 216
D A DDFLE +E
Sbjct: 431 DLGAADDFLEPEE 443
>ZFIN|ZDB-GENE-041210-172 [details] [associations]
symbol:ncaph2 "non-SMC condensin II complex,
subunit H2" species:7955 "Danio rerio" [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
ZFIN:ZDB-GENE-041210-172 GO:GO:0005634 GO:GO:0030261
eggNOG:NOG238357 KO:K11490 OMA:EVSVCRS InterPro:IPR009378
Pfam:PF06278 CTD:29781 HOGENOM:HOG000081774 HOVERGEN:HBG098083
OrthoDB:EOG408N7P EMBL:BX649398 EMBL:BC146715 IPI:IPI00484101
RefSeq:NP_001038456.1 UniGene:Dr.74031 STRING:Q5RH01
Ensembl:ENSDART00000040827 GeneID:562678 KEGG:dre:562678
GeneTree:ENSGT00390000014443 InParanoid:Q5RH01 NextBio:20884528
Bgee:Q5RH01 Uniprot:Q5RH01
Length = 592
Score = 265 (98.3 bits), Expect = 9.8e-20, P = 9.8e-20
Identities = 138/517 (26%), Positives = 213/517 (41%)
Query: 25 VQPERELQANWEVDLAKKLEDYLLKICSGQVTASESLDSISVNFAEAALLVQGSVQVYSR 84
+QP R+L NW++DLA +L +YL ++ Q+T S +NFAEAALL+QGS +Y R
Sbjct: 12 LQPLRDLTKNWDIDLASQLGEYLEEL--DQMTISFDGGKTMMNFAEAALLIQGSTCIYGR 69
Query: 85 KVEYLYNLVLHTLEFISQKSQQDQIEGTPVQAEESGSHAVAGEENDFFWGFDDVPVEVKN 144
KVE L+ LV TL++IS K+++ +G+ ++ + A +G E D FD++ +
Sbjct: 70 KVELLHTLVFQTLDYISNKNKKRDKQGS--SSDGNQEQAPSGSEGDGC-EFDEIEQDENV 126
Query: 145 CLDSPNGKDTS--LNLFVKPPANLVVLEGDCLDTVGDGTELESYLLATSDLYRDFILLDT 202
+ KD + + + PP +L+ E L+ LL + +R I T
Sbjct: 127 NTHNITMKDPTEPVRIIRLPPESLIPAESHEKQKY-PLLSLKGELLGSCKDFR--INTFT 183
Query: 203 YDSVAVDDFLEGDEVCKGPNDVYRGSSTRKSFQSPTRRSG-GTAHKSSLAKNKDVNLPAS 261
D + KG +V R S P + G A + D
Sbjct: 184 MDEAGLMRLGSNTHFLKGVAEVQRDFSVH--LPEPLQIEGEAAAANGGYDEEVDGGAEVL 241
Query: 262 PRVACGFDVGPNPPVNDNFGENYHGFDMDDNYSEPRDFDNSDDED--------DPWKPLN 313
P + D G +D + E H + PR E+ DPWK +
Sbjct: 242 PPLE---DHGMEVE-SDEWVER-HEAPSEGRMLRPRPAVQPVSEEPKQLKETVDPWKLHD 296
Query: 314 PHEPGNLKVKPFRKVKTFR------RNGVKSAKRIS----ISTIFPLA------KLR-GT 356
P+ + KP + K ++ +G + K S T F A KL+ G
Sbjct: 297 PYATFG-EDKPLKAGKCYKVPAGLDESGKRKRKGPSKLQDFGTWFNKAFETADRKLKNGP 355
Query: 357 ISPELTEIWEARHKCFEEQRASQPPSLYEKLRQSLADEGHETFDAFANPGCYEDKGYDSG 416
P+L I+ ++ +QR + K ++DE E + P ED+
Sbjct: 356 TFPDLNYIFVSKM----DQRLKVQRQMLRKRGVFVSDE--ELKKTYLEPENVEDQV---- 405
Query: 417 DPDIGHPDFDMPDGMYMDEDVPLQHDKHDDGPAPFEPNEAFEHGSQDSHAN---LEDLCR 473
I HPD D D Y DE+ HD D P E + E QD H + EDL +
Sbjct: 406 -EVIRHPDADGDD--YSDEE----HDNLADDLEPAEHLDDQEQIFQDLHMSRMSYEDLVK 458
Query: 474 SHLDALLANIAETEKQTELAARVSSWKQKIENNLDEQ 510
+D L N + ++T L+ RV W+ I +L Q
Sbjct: 459 KSVDLFLVNSQKYAQETALSRRVKDWEDSINPHLAAQ 495
>MGI|MGI:1289164 [details] [associations]
symbol:Ncaph2 "non-SMC condensin II complex, subunit H2"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0033077 "T
cell differentiation in thymus" evidence=IMP] MGI:MGI:1289164
GO:GO:0005634 GO:GO:0033077 GO:GO:0030261 eggNOG:NOG238357
KO:K11490 OMA:EVSVCRS InterPro:IPR009378 Pfam:PF06278 CTD:29781
HOVERGEN:HBG098083 OrthoDB:EOG408N7P GeneTree:ENSGT00390000014443
EMBL:AK004160 EMBL:AK031135 EMBL:AK037175 EMBL:AK080447
EMBL:AK085584 EMBL:AK088294 EMBL:AK146642 EMBL:AK152158
EMBL:AK163958 EMBL:AK165250 EMBL:BC003900 IPI:IPI00403116
IPI:IPI00625515 IPI:IPI00856653 RefSeq:NP_001108604.1
RefSeq:NP_001258530.1 UniGene:Mm.143167 STRING:Q8BSP2
PhosphoSite:Q8BSP2 PaxDb:Q8BSP2 PRIDE:Q8BSP2
Ensembl:ENSMUST00000074552 Ensembl:ENSMUST00000088717 GeneID:52683
KEGG:mmu:52683 UCSC:uc007xgg.2 UCSC:uc007xgh.2 UCSC:uc007xgk.2
ChiTaRS:NCAPH2 NextBio:309335 Bgee:Q8BSP2 CleanEx:MM_NCAPH2
Genevestigator:Q8BSP2 Uniprot:Q8BSP2
Length = 607
Score = 218 (81.8 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 64/156 (41%), Positives = 88/156 (56%)
Query: 20 DVRFT--VQPERELQANWEVDLAKKLEDYLLKICSGQVTASESLDSISVNFAEAALLVQG 77
+VRF +QP R+L NWEVD+A +L +YL ++ Q+ S ++NF EAALL+QG
Sbjct: 5 EVRFAHLLQPIRDLTKNWEVDVAAQLGEYLEEL--DQICISFDEGKTTMNFIEAALLIQG 62
Query: 78 SVQVYSRKVEYLYNLVLHTLEFISQKSQQDQIEGTPVQAEES----GSHAVAGEENDFFW 133
S VYS+KVEYLY+LV L+FIS K + Q+ + VQ + S S EN+F
Sbjct: 63 SACVYSKKVEYLYSLVYQALDFISGKRRAKQL--SLVQEDGSKKTVNSETPCETENEFL- 119
Query: 134 GFDDVPVEVKNCLDSPNGKDTSLNLFVKP--PANLV 167
DD P N +D N + +S L + P P LV
Sbjct: 120 SLDDFPDSRAN-VDLKNDQASS-ELLIIPLLPMALV 153
Score = 91 (37.1 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 60/261 (22%), Positives = 109/261 (41%)
Query: 296 PRDFDNSDDEDDPWKPLNPHEPGNLKVKPFRKVKTFR-RNGVKSA-----KRISISTIFP 349
P + DPW+ L+P + +L+ K F+K K + GV+ A KR + +
Sbjct: 296 PEPASRLQETPDPWQSLDPFD--SLESKVFQKGKPYSVPPGVEEAPGQKRKRKGATKLQD 353
Query: 350 LAKLRGTISPELTEIWEARHK--CFEEQRASQPPSLYEKLRQSLADEGHETFDAFANPGC 407
K E + AR K F + + E+L ++L + PG
Sbjct: 354 FHKWYLDAYAEHPDGRRARRKGPTFADMEVLYWKHVKEQL-ETLQKLRRRKINERWLPGA 412
Query: 408 YEDKGYDSGDPDIGHPDFDMPDGMYMDEDVPLQHDKHDDGPAPFEPNEAFEHGSQDSHAN 467
+D D + + D + + +D L+ +++ + PA P EA + ++ +
Sbjct: 413 KQDLWPTEED----RLEESLED-LGVADDF-LEPEEYVEEPAGVMPEEAADLDAEAMPES 466
Query: 468 L--EDLCRSHLDALLANIAETEKQTELAARVSSWKQKIENNLDEQVTYCFTPFYPESSYI 525
L E+L R +++ +A + ++TEL+ R+ W+ I+ L EQ + PF
Sbjct: 467 LRYEELVRRNVELFIATSQKFIQETELSQRIRDWEDTIQPLLQEQEQH--VPFDIHIYGD 524
Query: 526 SLSSTFNFITFVCLSFKLVYG 546
L+S F + C +LV G
Sbjct: 525 QLASRFPQLNEWCPFSELVAG 545
Score = 38 (18.4 bits), Expect = 9.8e-14, Sum P(2) = 9.8e-14
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 204 DSVAVDDFLEGDEVCKGPNDV 224
D DDFLE +E + P V
Sbjct: 430 DLGVADDFLEPEEYVEEPAGV 450
Score = 38 (18.4 bits), Expect = 9.8e-14, Sum P(2) = 9.8e-14
Identities = 28/122 (22%), Positives = 48/122 (39%)
Query: 274 PPVNDNFGENYHGFDMDDNYSEPRDFDNSDDEDDPWKP--LNPHE-PGNLKVKPF--RKV 328
P D E+ + D++ EP ++ P + L+ P +L+ + R V
Sbjct: 418 PTEEDRLEESLEDLGVADDFLEPEEYVEEPAGVMPEEAADLDAEAMPESLRYEELVRRNV 477
Query: 329 KTFRRNGVKSAKRISISTIFPLAKLRGTISPELTEIWEARHKCFE-----EQRASQPPSL 383
+ F K + +S + TI P L E + +H F+ +Q AS+ P L
Sbjct: 478 ELFIATSQKFIQETELSQ--RIRDWEDTIQPLLQE--QEQHVPFDIHIYGDQLASRFPQL 533
Query: 384 YE 385
E
Sbjct: 534 NE 535
>UNIPROTKB|Q3SZL8 [details] [associations]
symbol:NCAPH2 "Condensin-2 complex subunit H2" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0030261
"chromosome condensation" evidence=IEA] GO:GO:0005634 GO:GO:0030261
eggNOG:NOG238357 KO:K11490 InterPro:IPR009378 Pfam:PF06278
EMBL:BC102795 IPI:IPI00708981 RefSeq:NP_001070511.1
UniGene:Bt.21459 STRING:Q3SZL8 GeneID:767978 KEGG:bta:767978
CTD:29781 HOGENOM:HOG000081774 HOVERGEN:HBG098083 InParanoid:Q3SZL8
OrthoDB:EOG408N7P NextBio:20918333 Uniprot:Q3SZL8
Length = 622
Score = 212 (79.7 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 51/122 (41%), Positives = 72/122 (59%)
Query: 20 DVRFT--VQPERELQANWEVDLAKKLEDYLLKICSGQVTASESLDSISVNFAEAALLVQG 77
+ RF + P R+L NWEVD+A +L +YL ++ Q+ S ++NF EAALL+QG
Sbjct: 5 EARFAHLLLPIRDLTRNWEVDVAAQLGEYLEEL--DQICISFDKGKTTMNFIEAALLIQG 62
Query: 78 SVQVYSRKVEYLYNLVLHTLEFISQKSQQDQIEGTPVQAEESGSHAVAGEENDF-FWGFD 136
S VYS+KVEYLY+LV L+FIS K Q Q+ TP + + A +E + F D
Sbjct: 63 SACVYSKKVEYLYSLVYQALDFISGKKQAKQLSSTPEDGTIGDASSRAPQEAEQKFRALD 122
Query: 137 DV 138
D+
Sbjct: 123 DL 124
Score = 79 (32.9 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 77/350 (22%), Positives = 124/350 (35%)
Query: 217 VCKGPNDVYRGSSTRKSF-QSPTRRSGGTAHKSSLAKNKDVNLPASPRVACGFDVGPNPP 275
VC P S S + P R GG +D A P A +V PP
Sbjct: 224 VCGSPGPALSTSQEPGSSPEGPVPRGGGVGEDE-----EDAEGAAEPPEASAPEVPMEPP 278
Query: 276 VNDNFGENY---HGFDMDDNYSEPRDFDNSDDEDDPWKPLNPHEPGNLKVKPFRKVKTFR 332
+ ++ + + + P D DPW+ L+P + + K PFRK + +
Sbjct: 279 EPRSPEQSVAQPRRYTLRERKEAPEPASRLKDTPDPWQGLDPFDSPDSK--PFRKGRPYS 336
Query: 333 -RNGVKSA-----KRISISTIFPLAKLRGTISPELTEIWEARHK--CFEEQRA---SQPP 381
V+ A KR + + + T+ +R K F +
Sbjct: 337 VPPRVEEAPGQKRKRKGAVKLQDFHQWYLAAYADHTDSRRSRRKGPSFADMEVLYWKHVK 396
Query: 382 SLYEKLRQSLADEGHETFDAFANPGCY---EDKGYDSGDPDIGHPDFDMPDGMYMDEDVP 438
E LR+ E E + A G + ED+ DS + D+G D + Y + P
Sbjct: 397 EQLETLRKMQRREAAERWLPRAEQGLWPVEEDRLEDSVE-DLGAADDFLEPEEYAE---P 452
Query: 439 LQHDKHDDGPAPFEPNEAFEHGSQDSHANLE-DLCRSHLDALLANIA-ETEKQTELAARV 496
+ +D E A + N+E + S D + E ++TEL +
Sbjct: 453 EGAEPGEDADMEAEAMPASLRYEELVQRNVELFVTASKQDVFVTTSRQELVQETELKQHI 512
Query: 497 SSWKQKIENNLDEQVTYCFTPFYPESSYISLSSTFNFITFVCLSFKLVYG 546
W+ I++ L EQ + PF + + S F+ + C KLV G
Sbjct: 513 RGWEDAIQSLLQEQEEH--VPFDIHTYGDQVVSRFSQLNQWCPFAKLVAG 560
Score = 42 (19.8 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 310 KPLNPHEPGNLKVKP 324
+P NP EPG + +P
Sbjct: 205 QPWNPKEPGRAEEQP 219
Score = 37 (18.1 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 204 DSVAVDDFLEGDE 216
D A DDFLE +E
Sbjct: 436 DLGAADDFLEPEE 448
>RGD|1565937 [details] [associations]
symbol:Ncaph2 "non-SMC condensin II complex, subunit H2"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=ISO]
RGD:1565937 GO:GO:0005634 GO:GO:0030261 eggNOG:NOG238357 KO:K11490
InterPro:IPR009378 Pfam:PF06278 CTD:29781 HOGENOM:HOG000081774
HOVERGEN:HBG098083 OrthoDB:EOG408N7P GeneTree:ENSGT00390000014443
EMBL:BC097379 IPI:IPI00779107 RefSeq:NP_001020048.1 UniGene:Rn.4227
HSSP:P20823 STRING:Q4V8I2 PhosphoSite:Q4V8I2 PRIDE:Q4V8I2
Ensembl:ENSRNOT00000055808 GeneID:300149 KEGG:rno:300149
NextBio:646447 ArrayExpress:Q4V8I2 Genevestigator:Q4V8I2
Uniprot:Q4V8I2
Length = 554
Score = 167 (63.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 78/295 (26%), Positives = 129/295 (43%)
Query: 66 VNFAEAALLVQGSVQVYSRKVEYLYNLVLHTLEFISQKSQQDQIEGTPVQAEESGSHAV- 124
+NF EAALL+QGS VYS+KVEYLY+LV L+FIS K + Q+ + VQ E+ + AV
Sbjct: 1 MNFIEAALLIQGSACVYSKKVEYLYSLVYQALDFISGKRRAKQL--SLVQ-EDGSNRAVN 57
Query: 125 AG---EENDFFWGFDDVPVEVKNCLDSPNGKDTSLNLFVKPPANLVVLEGDCLDTVGDGT 181
+G E D F DD P N +D N + +S L + P + ++ D ++ +
Sbjct: 58 SGTPCETEDEFLSLDDFPDSRAN-VDLKNDQASS-ELLIIPLLPMALVAPDEVEKSSNPL 115
Query: 182 -ELESYLLATSDLYRDFILLDTYDSVAVDDFLEGDEVCK-GPNDVYRGSSTRKSFQSPTR 239
+ +LA+ +DF + L+ +C P DV+ ++K +
Sbjct: 116 YSCQGEVLASR---KDFRMNTCTPDPRGSFMLDPVGMCPVEPVDVHPMPRSQKDAEEAEE 172
Query: 240 RSGGTAHKSSLAKNKDVNL-PASPRVACGF----DVGPNP-----PVNDNFGENY----H 285
+ + S + ++ P P ++ G DV P P +
Sbjct: 173 QPMAVSRNGSPVSVRSISQEPDGPALSSGDEDAEDVAELPEVALEPAEPRTSQQTAILPR 232
Query: 286 GFDMDDNYSEPRDFDNSDDEDDPWKPLNPHEPGNLKVKPFRKVKTFR-RNGVKSA 339
+ + + P + DPW+ L+P + +L K F+K K + GV+ A
Sbjct: 233 RYMLRERQGAPEPASQPQETPDPWQSLDPFD--SLDSKLFQKGKPYSVPPGVEEA 285
Score = 71 (30.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 22/78 (28%), Positives = 38/78 (48%)
Query: 469 EDLCRSHLDALLANIAETEKQTELAARVSSWKQKIENNLDEQVTYCFTPFYPESSYISLS 528
E+L R +++ +A + ++TEL+ R+ W+ I+ L EQ + PF + L
Sbjct: 417 EELVRRNVELFIATSQKFIQETELSQRIRDWEDTIQPLLQEQEQH--VPFDIHTYGDQLV 474
Query: 529 STFNFITFVCLSFKLVYG 546
S F + C +LV G
Sbjct: 475 SRFPQLNEWCPFAELVAG 492
>WB|WBGene00016202 [details] [associations]
symbol:kle-2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0000070 "mitotic sister chromatid segregation" evidence=IMP]
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0005694
GO:GO:0016246 GO:GO:0000070 GO:GO:0040035 InterPro:IPR009378
Pfam:PF06278 GeneTree:ENSGT00390000014443 EMBL:FO080706
RefSeq:NP_498727.2 ProteinModelPortal:P34341 IntAct:P34341
STRING:P34341 PaxDb:P34341 EnsemblMetazoa:C29E4.2.1
EnsemblMetazoa:C29E4.2.2 GeneID:176116 KEGG:cel:CELE_C29E4.2
UCSC:C29E4.2 CTD:176116 WormBase:C29E4.2 eggNOG:NOG236698
HOGENOM:HOG000019611 InParanoid:P34341 OMA:WRSAARI NextBio:891184
Uniprot:P34341
Length = 821
Score = 129 (50.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 28/98 (28%), Positives = 50/98 (51%)
Query: 19 SDVRFTVQPERELQANWEVDLAKKLEDYLLKICSGQVTASESLDSISV----NFAEAALL 74
+D+ + V P ++L N+ +D+ K L YL I +D+ + +F A +
Sbjct: 12 TDLAWLVTPAKDLVENFSIDVLKALAGYLEVIRQESEDTDNQVDAATTYRLFDFQRACRI 71
Query: 75 VQGSVQVYSRKVEYLYNLVLHTLEFISQKSQQDQIEGT 112
+QGS VY RKV+++Y L + ++ + K Q D G+
Sbjct: 72 IQGSCAVYGRKVDHVYELTISVVDLVENKGQDDGNTGS 109
Score = 47 (21.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 282 ENYHGFDMDDNYSEPRDFDNSDDEDD 307
ENY D DD++ D DD+DD
Sbjct: 403 ENYAPMDFDDDFGGGGD----DDDDD 424
Score = 42 (19.8 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 430 GMYMDEDVPLQHDKHDDGPAPFEPNEAFEHGSQD 463
G M D P + D+ AP + ++ F G D
Sbjct: 387 GSVMQNDEPNTSRRPDENYAPMDFDDDFGGGGDD 420
>UNIPROTKB|P34341 [details] [associations]
symbol:kle-2 "Kleisin, abnormal closure, protein 2"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
GO:GO:0005694 GO:GO:0016246 GO:GO:0000070 GO:GO:0040035
InterPro:IPR009378 Pfam:PF06278 GeneTree:ENSGT00390000014443
EMBL:FO080706 RefSeq:NP_498727.2 ProteinModelPortal:P34341
IntAct:P34341 STRING:P34341 PaxDb:P34341 EnsemblMetazoa:C29E4.2.1
EnsemblMetazoa:C29E4.2.2 GeneID:176116 KEGG:cel:CELE_C29E4.2
UCSC:C29E4.2 CTD:176116 WormBase:C29E4.2 eggNOG:NOG236698
HOGENOM:HOG000019611 InParanoid:P34341 OMA:WRSAARI NextBio:891184
Uniprot:P34341
Length = 821
Score = 129 (50.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 28/98 (28%), Positives = 50/98 (51%)
Query: 19 SDVRFTVQPERELQANWEVDLAKKLEDYLLKICSGQVTASESLDSISV----NFAEAALL 74
+D+ + V P ++L N+ +D+ K L YL I +D+ + +F A +
Sbjct: 12 TDLAWLVTPAKDLVENFSIDVLKALAGYLEVIRQESEDTDNQVDAATTYRLFDFQRACRI 71
Query: 75 VQGSVQVYSRKVEYLYNLVLHTLEFISQKSQQDQIEGT 112
+QGS VY RKV+++Y L + ++ + K Q D G+
Sbjct: 72 IQGSCAVYGRKVDHVYELTISVVDLVENKGQDDGNTGS 109
Score = 47 (21.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 282 ENYHGFDMDDNYSEPRDFDNSDDEDD 307
ENY D DD++ D DD+DD
Sbjct: 403 ENYAPMDFDDDFGGGGD----DDDDD 424
Score = 42 (19.8 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 430 GMYMDEDVPLQHDKHDDGPAPFEPNEAFEHGSQD 463
G M D P + D+ AP + ++ F G D
Sbjct: 387 GSVMQNDEPNTSRRPDENYAPMDFDDDFGGGGDD 420
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.134 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 591 591 0.00084 120 3 11 22 0.44 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 623 (66 KB)
Total size of DFA: 352 KB (2175 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 58.36u 0.13s 58.49t Elapsed: 00:00:02
Total cpu time: 58.36u 0.13s 58.49t Elapsed: 00:00:02
Start: Fri May 10 12:31:41 2013 End: Fri May 10 12:31:43 2013