Query 007731
Match_columns 591
No_of_seqs 585 out of 2554
Neff 7.3
Searched_HMMs 46136
Date Thu Mar 28 14:34:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007731.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007731hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02887 hydrolase family prot 100.0 1E-113 2E-118 950.9 53.5 547 38-591 29-580 (580)
2 PRK10513 sugar phosphate phosp 100.0 6.8E-42 1.5E-46 349.7 30.4 268 317-591 1-269 (270)
3 PRK10976 putative hydrolase; P 100.0 3.9E-42 8.5E-47 350.8 27.9 261 319-591 2-265 (266)
4 PRK15126 thiamin pyrimidine py 100.0 1.3E-41 2.8E-46 348.4 29.1 260 318-590 1-262 (272)
5 COG0319 Predicted metal-depend 100.0 2.8E-41 6E-46 311.4 17.3 117 169-286 36-152 (153)
6 COG0561 Cof Predicted hydrolas 100.0 4.8E-39 1E-43 327.8 28.7 259 317-591 1-262 (264)
7 PRK10530 pyridoxal phosphate ( 100.0 8E-39 1.7E-43 326.9 28.6 264 317-591 1-272 (272)
8 PF08282 Hydrolase_3: haloacid 100.0 1.6E-38 3.4E-43 317.8 27.7 254 322-586 1-254 (254)
9 PRK13963 unkown domain/putativ 100.0 3.6E-39 7.8E-44 314.7 19.1 144 106-284 108-257 (258)
10 TIGR00099 Cof-subfamily Cof su 100.0 1.2E-36 2.5E-41 308.9 27.2 254 321-586 1-256 (256)
11 TIGR00043 metalloprotein, YbeY 100.0 5.8E-38 1.3E-42 275.9 14.4 107 172-279 2-110 (110)
12 PRK00016 metal-binding heat sh 100.0 1.6E-36 3.5E-41 284.1 18.9 115 169-284 36-155 (159)
13 PF02130 UPF0054: Uncharacteri 100.0 4E-37 8.7E-42 284.8 14.0 110 169-279 33-145 (145)
14 PRK01158 phosphoglycolate phos 100.0 7.1E-35 1.5E-39 290.6 25.7 229 317-591 1-230 (230)
15 PRK03669 mannosyl-3-phosphogly 100.0 2.6E-33 5.7E-38 287.0 24.7 247 318-590 6-268 (271)
16 TIGR01482 SPP-subfamily Sucros 100.0 2.7E-32 6E-37 270.9 23.1 219 322-589 1-224 (225)
17 PRK00192 mannosyl-3-phosphogly 100.0 6.3E-32 1.4E-36 277.1 23.9 246 317-590 2-270 (273)
18 TIGR01486 HAD-SF-IIB-MPGP mann 100.0 8.3E-32 1.8E-36 273.6 22.7 241 321-590 1-256 (256)
19 TIGR01487 SPP-like sucrose-pho 100.0 2E-31 4.3E-36 263.7 23.3 215 319-586 1-215 (215)
20 TIGR01485 SPP_plant-cyano sucr 100.0 2.7E-30 5.9E-35 261.4 20.6 233 320-591 2-248 (249)
21 TIGR02471 sucr_syn_bact_C sucr 100.0 3.1E-30 6.7E-35 258.9 17.2 230 321-591 1-236 (236)
22 PLN02382 probable sucrose-phos 100.0 5E-29 1.1E-33 268.7 21.9 237 316-591 6-261 (413)
23 PRK14502 bifunctional mannosyl 100.0 4.6E-27 1E-31 259.9 27.5 290 288-590 374-690 (694)
24 PTZ00174 phosphomannomutase; P 100.0 5.2E-28 1.1E-32 244.6 18.1 233 316-574 2-245 (247)
25 TIGR02463 MPGP_rel mannosyl-3- 99.9 3E-26 6.5E-31 227.5 22.3 214 321-560 1-221 (221)
26 PRK10187 trehalose-6-phosphate 99.9 1.3E-24 2.9E-29 221.9 23.1 216 320-589 15-243 (266)
27 TIGR02461 osmo_MPG_phos mannos 99.9 1.2E-24 2.6E-29 216.9 19.3 209 321-560 1-225 (225)
28 PF05116 S6PP: Sucrose-6F-phos 99.9 2.2E-25 4.7E-30 225.3 12.4 231 320-591 3-247 (247)
29 PLN02423 phosphomannomutase 99.9 2.4E-23 5.2E-28 210.2 19.1 222 319-567 6-238 (245)
30 TIGR01484 HAD-SF-IIB HAD-super 99.9 1.1E-22 2.3E-27 199.4 22.5 199 321-559 1-204 (204)
31 PRK14501 putative bifunctional 99.9 2.7E-22 5.8E-27 231.8 26.9 250 289-589 446-723 (726)
32 PRK12702 mannosyl-3-phosphogly 99.9 1.6E-21 3.6E-26 197.0 23.2 249 319-590 1-294 (302)
33 PLN02205 alpha,alpha-trehalose 99.8 2.3E-19 4.9E-24 208.1 22.7 252 289-589 535-844 (854)
34 TIGR00685 T6PP trehalose-phosp 99.8 1.3E-18 2.8E-23 175.7 20.0 220 318-589 2-242 (244)
35 PLN02580 trehalose-phosphatase 99.8 3E-17 6.6E-22 173.4 22.1 230 316-589 116-376 (384)
36 PLN03017 trehalose-phosphatase 99.7 1.1E-15 2.3E-20 160.4 22.3 222 318-590 110-359 (366)
37 TIGR01670 YrbI-phosphatas 3-de 99.7 8.2E-17 1.8E-21 151.2 11.8 72 519-590 77-149 (154)
38 TIGR02726 phenyl_P_delta pheny 99.7 1.3E-16 2.8E-21 151.8 12.0 137 318-588 6-153 (169)
39 PRK09484 3-deoxy-D-manno-octul 99.7 1.8E-16 3.8E-21 153.3 11.0 72 519-590 97-168 (183)
40 PLN03063 alpha,alpha-trehalose 99.7 7.2E-15 1.6E-19 170.6 24.3 222 289-554 461-721 (797)
41 PLN02151 trehalose-phosphatase 99.7 1.1E-14 2.4E-19 152.3 22.0 227 318-589 97-344 (354)
42 COG3769 Predicted hydrolase (H 99.6 8.4E-14 1.8E-18 133.1 18.8 254 315-589 3-270 (274)
43 PRK11133 serB phosphoserine ph 99.6 3E-15 6.4E-20 156.6 9.6 71 516-587 246-316 (322)
44 PLN03064 alpha,alpha-trehalose 99.6 7E-14 1.5E-18 162.2 20.3 222 288-553 544-810 (934)
45 COG1778 Low specificity phosph 99.6 7.5E-15 1.6E-19 133.7 8.6 71 518-588 83-154 (170)
46 PF02358 Trehalose_PPase: Treh 99.5 1.1E-13 2.3E-18 139.1 14.8 212 323-576 1-233 (235)
47 COG1877 OtsB Trehalose-6-phosp 99.5 2.6E-12 5.5E-17 130.0 21.4 204 313-562 12-230 (266)
48 TIGR02468 sucrsPsyn_pln sucros 99.3 4.8E-11 1E-15 139.4 18.7 237 320-589 771-1049(1050)
49 KOG3189 Phosphomannomutase [Li 99.3 4.6E-12 1E-16 119.4 6.6 228 320-568 12-245 (252)
50 TIGR00338 serB phosphoserine p 99.2 2.4E-10 5.1E-15 113.1 16.9 61 517-578 151-211 (219)
51 COG0560 SerB Phosphoserine pho 99.2 2.1E-11 4.5E-16 120.5 7.8 64 512-576 138-201 (212)
52 PRK13288 pyrophosphatase PpaX; 99.2 1.6E-10 3.5E-15 114.0 12.0 111 469-587 96-211 (214)
53 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.1 2.8E-09 6.2E-14 108.0 19.1 57 319-376 1-60 (249)
54 COG0546 Gph Predicted phosphat 99.1 2.4E-10 5.2E-15 113.7 9.9 108 466-579 100-212 (220)
55 PRK13223 phosphoglycolate phos 99.1 3.2E-10 6.9E-15 116.5 10.6 103 469-577 115-222 (272)
56 cd01427 HAD_like Haloacid deha 99.1 5.9E-10 1.3E-14 99.9 11.0 55 321-375 1-63 (139)
57 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.1 2.9E-09 6.2E-14 108.5 17.3 57 319-375 1-63 (257)
58 smart00775 LNS2 LNS2 domain. T 99.1 3.2E-10 6.9E-15 106.9 9.5 101 321-429 1-122 (157)
59 PRK10671 copA copper exporting 99.1 4.9E-10 1.1E-14 132.1 11.3 236 317-587 515-765 (834)
60 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.1 3.7E-09 7.9E-14 102.7 14.9 45 517-561 146-190 (201)
61 PRK13225 phosphoglycolate phos 99.0 1E-09 2.2E-14 112.7 10.8 111 468-589 155-270 (273)
62 TIGR01452 PGP_euk phosphoglyco 99.0 1E-08 2.2E-13 105.7 18.0 56 319-375 2-60 (279)
63 PRK13222 phosphoglycolate phos 99.0 1.2E-09 2.7E-14 108.2 10.3 111 469-587 107-222 (226)
64 PRK10444 UMP phosphatase; Prov 99.0 8E-09 1.7E-13 104.7 15.8 56 319-375 1-59 (248)
65 PRK13226 phosphoglycolate phos 99.0 1.1E-09 2.4E-14 109.5 9.0 103 469-577 109-217 (229)
66 PLN02770 haloacid dehalogenase 99.0 5.5E-09 1.2E-13 105.8 13.3 115 468-588 121-239 (248)
67 PRK10826 2-deoxyglucose-6-phos 99.0 2.9E-09 6.4E-14 105.7 10.7 102 469-576 106-211 (222)
68 PRK13478 phosphonoacetaldehyde 99.0 2.2E-08 4.8E-13 102.5 17.3 88 468-561 114-204 (267)
69 PF03332 PMM: Eukaryotic phosp 99.0 1.5E-09 3.3E-14 105.6 7.9 207 342-569 2-215 (220)
70 PRK11587 putative phosphatase; 98.9 5.7E-09 1.2E-13 103.4 10.9 63 515-577 136-200 (218)
71 TIGR01422 phosphonatase phosph 98.9 1.7E-08 3.6E-13 102.4 14.1 89 468-562 112-203 (253)
72 PLN02645 phosphoglycolate phos 98.9 2.6E-08 5.7E-13 104.3 16.0 57 318-375 27-86 (311)
73 PLN03243 haloacid dehalogenase 98.9 1.1E-08 2.3E-13 104.5 11.7 106 468-579 122-229 (260)
74 PRK13582 thrH phosphoserine ph 98.9 7.5E-09 1.6E-13 101.2 10.0 67 517-589 131-198 (205)
75 PLN02575 haloacid dehalogenase 98.9 1.5E-08 3.1E-13 108.0 12.7 111 466-582 227-339 (381)
76 TIGR01449 PGP_bact 2-phosphogl 98.9 7.1E-09 1.5E-13 101.8 8.9 104 469-578 99-207 (213)
77 TIGR02137 HSK-PSP phosphoserin 98.9 3.3E-08 7.1E-13 97.2 13.5 68 515-587 129-196 (203)
78 TIGR03351 PhnX-like phosphonat 98.9 2.5E-08 5.3E-13 98.7 12.6 106 468-577 100-212 (220)
79 PRK11590 hypothetical protein; 98.9 6.5E-08 1.4E-12 95.6 15.5 95 469-568 110-209 (211)
80 PLN02779 haloacid dehalogenase 98.9 2.1E-08 4.5E-13 103.8 12.4 107 468-579 157-267 (286)
81 TIGR02253 CTE7 HAD superfamily 98.8 2.7E-08 5.8E-13 98.4 11.3 47 516-562 149-197 (221)
82 TIGR01454 AHBA_synth_RP 3-amin 98.8 2.7E-08 5.8E-13 97.5 10.5 63 515-577 129-196 (205)
83 TIGR01662 HAD-SF-IIIA HAD-supe 98.8 7E-08 1.5E-12 87.8 12.4 43 320-362 1-51 (132)
84 TIGR01656 Histidinol-ppas hist 98.8 7.8E-08 1.7E-12 89.5 12.5 41 517-557 101-141 (147)
85 PLN02954 phosphoserine phospha 98.7 2.3E-07 5E-12 92.0 15.4 61 515-577 152-216 (224)
86 PRK14988 GMP/IMP nucleotidase; 98.7 1.6E-07 3.5E-12 93.7 13.5 74 514-589 146-221 (224)
87 PRK10725 fructose-1-P/6-phosph 98.7 1.1E-07 2.4E-12 91.5 11.9 46 514-559 139-185 (188)
88 PRK08942 D,D-heptose 1,7-bisph 98.7 4E-07 8.7E-12 87.6 14.5 61 517-577 103-169 (181)
89 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.7 1.6E-07 3.6E-12 91.5 11.4 48 514-561 151-198 (202)
90 PRK10563 6-phosphogluconate ph 98.7 1.4E-07 2.9E-12 93.6 10.8 45 515-559 140-184 (221)
91 TIGR01488 HAD-SF-IB Haloacid D 98.6 9.1E-08 2E-12 91.1 8.3 41 513-553 137-177 (177)
92 TIGR01664 DNA-3'-Pase DNA 3'-p 98.6 2.5E-07 5.5E-12 88.0 11.2 47 316-362 10-68 (166)
93 TIGR00213 GmhB_yaeD D,D-heptos 98.6 2.8E-07 6.1E-12 88.4 11.6 62 516-577 105-171 (176)
94 PLN02940 riboflavin kinase 98.6 2.6E-07 5.7E-12 99.4 12.6 103 469-577 107-213 (382)
95 KOG1050 Trehalose-6-phosphate 98.6 7.8E-07 1.7E-11 101.7 16.6 219 288-553 457-692 (732)
96 TIGR02009 PGMB-YQAB-SF beta-ph 98.6 4.2E-07 9.1E-12 87.1 11.8 41 516-556 141-181 (185)
97 PHA02597 30.2 hypothetical pro 98.6 3.4E-07 7.3E-12 89.1 11.2 45 517-563 130-177 (197)
98 TIGR01689 EcbF-BcbF capsule bi 98.6 1.7E-07 3.6E-12 84.8 8.0 59 319-377 1-80 (126)
99 PRK06769 hypothetical protein; 98.6 5.9E-07 1.3E-11 86.0 12.2 45 518-562 94-139 (173)
100 TIGR01684 viral_ppase viral ph 98.6 2.1E-07 4.5E-12 94.9 8.7 59 319-377 126-187 (301)
101 TIGR01681 HAD-SF-IIIC HAD-supe 98.5 8.5E-07 1.8E-11 80.7 11.8 53 320-372 1-66 (128)
102 TIGR01990 bPGM beta-phosphoglu 98.5 7.2E-07 1.6E-11 85.5 11.7 42 515-556 139-180 (185)
103 TIGR01460 HAD-SF-IIA Haloacid 98.5 4.6E-06 9.9E-11 83.9 17.5 53 322-375 1-57 (236)
104 TIGR01261 hisB_Nterm histidino 98.5 9.6E-07 2.1E-11 83.6 11.6 43 517-559 103-146 (161)
105 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.5 9.7E-06 2.1E-10 81.8 19.5 59 318-377 7-67 (242)
106 PRK06698 bifunctional 5'-methy 98.5 6.1E-07 1.3E-11 99.1 11.3 103 467-578 342-447 (459)
107 TIGR01668 YqeG_hyp_ppase HAD s 98.5 2.6E-06 5.5E-11 81.4 13.5 47 316-362 22-69 (170)
108 TIGR01548 HAD-SF-IA-hyp1 haloa 98.5 1.3E-06 2.8E-11 85.1 11.5 80 467-553 118-197 (197)
109 TIGR01511 ATPase-IB1_Cu copper 98.5 1.5E-06 3.2E-11 98.3 13.5 132 319-587 385-519 (562)
110 TIGR01525 ATPase-IB_hvy heavy 98.4 2.2E-06 4.7E-11 97.0 14.4 134 318-587 363-500 (556)
111 TIGR01549 HAD-SF-IA-v1 haloaci 98.4 2.8E-06 6.1E-11 79.1 12.8 76 470-554 79-154 (154)
112 TIGR01428 HAD_type_II 2-haloal 98.4 1.5E-06 3.3E-11 84.5 11.2 84 469-558 106-189 (198)
113 TIGR02252 DREG-2 REG-2-like, H 98.4 3.8E-06 8.2E-11 82.0 13.7 41 517-557 160-201 (203)
114 PRK09552 mtnX 2-hydroxy-3-keto 98.4 8E-06 1.7E-10 81.0 16.1 38 517-558 147-184 (219)
115 PRK11033 zntA zinc/cadmium/mer 98.4 2E-05 4.3E-10 91.9 20.9 101 468-587 581-681 (741)
116 TIGR01116 ATPase-IIA1_Ca sarco 98.4 4.2E-06 9.2E-11 99.8 15.0 66 518-587 618-683 (917)
117 TIGR02254 YjjG/YfnB HAD superf 98.4 4.6E-06 9.9E-11 82.4 12.9 45 516-560 151-198 (224)
118 TIGR01106 ATPase-IIC_X-K sodiu 98.4 3.4E-06 7.4E-11 101.4 14.2 68 517-588 670-738 (997)
119 TIGR01993 Pyr-5-nucltdase pyri 98.3 8.7E-06 1.9E-10 78.3 13.7 42 517-558 141-182 (184)
120 PHA03398 viral phosphatase sup 98.3 1.5E-06 3.3E-11 88.8 8.7 59 319-377 128-189 (303)
121 TIGR01524 ATPase-IIIB_Mg magne 98.3 4.7E-06 1E-10 98.7 13.9 66 518-587 590-655 (867)
122 TIGR01489 DKMTPPase-SF 2,3-dik 98.3 8.7E-06 1.9E-10 78.0 13.4 42 514-558 145-186 (188)
123 TIGR01497 kdpB K+-transporting 98.3 1.2E-05 2.6E-10 91.9 15.8 133 319-587 426-561 (675)
124 PHA02530 pseT polynucleotide k 98.3 5.2E-06 1.1E-10 86.3 11.9 58 318-375 157-226 (300)
125 PRK01122 potassium-transportin 98.3 1.2E-05 2.7E-10 92.0 15.7 53 535-587 508-560 (679)
126 TIGR01672 AphA HAD superfamily 98.3 1.1E-05 2.3E-10 81.2 13.4 30 526-559 180-210 (237)
127 COG2217 ZntA Cation transport 98.3 4.5E-05 9.8E-10 87.6 20.1 104 467-587 549-652 (713)
128 PRK15122 magnesium-transportin 98.3 5.2E-06 1.1E-10 98.6 13.0 66 518-587 625-690 (903)
129 PRK10517 magnesium-transportin 98.3 4.9E-06 1.1E-10 98.7 12.8 66 518-587 625-690 (902)
130 PRK09449 dUMP phosphatase; Pro 98.3 8E-06 1.7E-10 81.0 12.2 62 516-577 149-215 (224)
131 TIGR01523 ATPase-IID_K-Na pota 98.3 7.9E-06 1.7E-10 98.4 14.4 67 517-587 732-799 (1053)
132 PRK10748 flavin mononucleotide 98.3 4.9E-06 1.1E-10 83.7 10.5 47 515-561 161-208 (238)
133 COG0637 Predicted phosphatase/ 98.3 4.6E-06 1E-10 83.1 10.1 49 513-561 138-187 (221)
134 PRK08238 hypothetical protein; 98.3 1.1E-05 2.4E-10 89.1 14.0 35 535-570 140-174 (479)
135 TIGR01517 ATPase-IIB_Ca plasma 98.3 5.9E-06 1.3E-10 98.9 12.6 66 518-587 656-722 (941)
136 TIGR01545 YfhB_g-proteo haloac 98.2 7.8E-06 1.7E-10 80.8 11.0 94 470-568 110-208 (210)
137 PRK14010 potassium-transportin 98.2 2.1E-05 4.6E-10 90.0 15.6 53 535-587 504-556 (673)
138 PLN02919 haloacid dehalogenase 98.2 6.5E-06 1.4E-10 99.2 12.1 114 467-586 173-291 (1057)
139 PF00702 Hydrolase: haloacid d 98.2 5.3E-06 1.1E-10 81.0 9.3 77 467-554 139-215 (215)
140 COG0647 NagD Predicted sugar p 98.2 6.9E-05 1.5E-09 76.5 17.4 56 316-372 5-63 (269)
141 TIGR01512 ATPase-IB2_Cd heavy 98.2 1.3E-05 2.9E-10 90.2 13.4 54 534-587 425-479 (536)
142 TIGR02247 HAD-1A3-hyp Epoxide 98.2 1E-05 2.3E-10 79.4 10.8 47 517-563 152-199 (211)
143 TIGR03333 salvage_mtnX 2-hydro 98.2 6.5E-05 1.4E-09 74.3 15.8 41 516-560 142-182 (214)
144 TIGR01647 ATPase-IIIA_H plasma 98.1 1.4E-05 3E-10 93.5 12.5 71 511-587 517-587 (755)
145 PF06888 Put_Phosphatase: Puta 98.1 1.7E-05 3.6E-10 79.4 11.1 43 510-552 142-187 (234)
146 PRK05446 imidazole glycerol-ph 98.1 3.2E-05 7E-10 82.0 13.9 44 516-559 103-147 (354)
147 COG0474 MgtA Cation transport 98.1 1.6E-05 3.4E-10 94.8 12.8 66 518-587 626-692 (917)
148 TIGR01686 FkbH FkbH-like domai 98.1 3.1E-05 6.7E-10 81.5 13.3 55 318-372 2-67 (320)
149 TIGR01685 MDP-1 magnesium-depe 98.1 1.7E-05 3.8E-10 75.9 10.2 57 319-375 2-85 (174)
150 TIGR01522 ATPase-IIA2_Ca golgi 98.1 3.1E-05 6.7E-10 92.2 14.1 66 518-587 605-671 (884)
151 PF12710 HAD: haloacid dehalog 98.0 1.1E-05 2.4E-10 77.6 7.2 33 518-551 157-192 (192)
152 COG2179 Predicted hydrolase of 98.0 9.5E-05 2.1E-09 69.0 11.4 60 316-375 25-85 (175)
153 PF13419 HAD_2: Haloacid dehal 97.9 1.4E-05 3E-10 74.8 6.1 84 468-557 90-173 (176)
154 smart00577 CPDc catalytic doma 97.9 3.5E-05 7.6E-10 71.8 8.2 34 525-558 106-139 (148)
155 TIGR01456 CECR5 HAD-superfamil 97.9 0.0015 3.2E-08 68.9 21.2 54 321-375 2-63 (321)
156 KOG0202 Ca2+ transporting ATPa 97.9 0.00013 2.8E-09 82.7 13.3 67 518-588 665-732 (972)
157 PRK11009 aphA acid phosphatase 97.9 0.00028 6E-09 71.0 14.2 30 528-561 182-212 (237)
158 TIGR01493 HAD-SF-IA-v2 Haloaci 97.9 1.4E-05 3E-10 76.1 4.3 37 516-552 138-174 (175)
159 KOG0207 Cation transport ATPas 97.8 0.0006 1.3E-08 78.2 17.4 103 468-587 736-838 (951)
160 COG4087 Soluble P-type ATPase 97.8 0.00012 2.5E-09 65.5 9.1 53 321-375 16-68 (152)
161 TIGR01657 P-ATPase-V P-type AT 97.8 0.00034 7.3E-09 84.9 15.9 66 517-588 788-853 (1054)
162 TIGR01652 ATPase-Plipid phosph 97.8 0.00019 4.1E-09 87.2 13.7 57 517-576 754-811 (1057)
163 KOG1615 Phosphoserine phosphat 97.8 9E-05 1.9E-09 70.7 8.1 62 511-574 152-215 (227)
164 PRK09456 ?-D-glucose-1-phospha 97.8 0.00029 6.2E-09 68.7 12.0 49 513-561 137-186 (199)
165 PLN02887 hydrolase family prot 97.7 1.3E-05 2.9E-10 90.1 2.5 78 19-108 1-82 (580)
166 COG0241 HisB Histidinol phosph 97.7 0.00051 1.1E-08 65.9 11.9 44 518-561 106-150 (181)
167 TIGR01509 HAD-SF-IA-v3 haloaci 97.7 5.1E-05 1.1E-09 72.2 4.8 41 516-556 139-179 (183)
168 TIGR01544 HAD-SF-IE haloacid d 97.6 0.0012 2.6E-08 67.7 14.4 38 516-553 190-230 (277)
169 TIGR01663 PNK-3'Pase polynucle 97.6 0.00032 6.9E-09 78.2 10.5 46 317-362 166-223 (526)
170 KOG0206 P-type ATPase [General 97.5 0.00035 7.5E-09 83.3 9.8 51 509-562 772-822 (1151)
171 PLN02811 hydrolase 97.5 0.0011 2.4E-08 65.7 11.6 63 515-577 135-203 (220)
172 COG1011 Predicted hydrolase (H 97.4 0.0013 2.8E-08 65.0 11.8 41 520-560 157-199 (229)
173 PTZ00445 p36-lilke protein; Pr 97.4 0.003 6.4E-08 61.8 12.9 51 512-562 156-207 (219)
174 PLN03190 aminophospholipid tra 97.4 0.0018 3.9E-08 78.9 14.0 41 335-375 725-765 (1178)
175 KOG3040 Predicted sugar phosph 97.3 0.013 2.9E-07 56.7 15.5 58 317-375 5-65 (262)
176 COG4359 Uncharacterized conser 97.2 0.0011 2.3E-08 62.9 7.3 108 413-559 77-184 (220)
177 PF13344 Hydrolase_6: Haloacid 97.2 0.00058 1.2E-08 59.5 4.9 53 322-375 1-56 (101)
178 KOG3120 Predicted haloacid deh 97.1 0.0017 3.6E-08 63.4 7.7 53 508-560 153-209 (256)
179 KOG2882 p-Nitrophenyl phosphat 97.1 0.019 4.2E-07 58.7 15.3 57 318-375 21-80 (306)
180 KOG3085 Predicted hydrolase (H 97.0 0.0044 9.6E-08 62.0 10.3 52 520-571 171-224 (237)
181 KOG0204 Calcium transporting A 97.0 0.0033 7.1E-08 71.7 10.2 66 517-586 725-791 (1034)
182 KOG0210 P-type ATPase [Inorgan 97.0 0.0025 5.4E-08 71.0 8.9 45 513-560 763-807 (1051)
183 PF13242 Hydrolase_like: HAD-h 97.0 0.0016 3.4E-08 53.3 5.6 62 517-578 4-73 (75)
184 TIGR01675 plant-AP plant acid 96.9 0.0069 1.5E-07 60.5 10.9 58 318-375 76-162 (229)
185 KOG0203 Na+/K+ ATPase, alpha s 96.9 0.0019 4.1E-08 73.5 7.1 50 526-578 700-750 (1019)
186 PF06437 ISN1: IMP-specific 5' 96.9 0.041 8.9E-07 58.0 16.3 52 318-369 146-199 (408)
187 TIGR01494 ATPase_P-type ATPase 96.8 0.0075 1.6E-07 67.4 11.5 56 319-374 327-385 (499)
188 KOG3109 Haloacid dehalogenase- 96.8 0.0072 1.6E-07 59.0 9.2 81 474-560 117-205 (244)
189 KOG2914 Predicted haloacid-hal 96.6 0.03 6.5E-07 55.7 12.6 64 513-576 147-214 (222)
190 PF08645 PNK3P: Polynucleotide 96.6 0.0017 3.8E-08 61.3 3.3 42 320-361 1-54 (159)
191 PF08235 LNS2: LNS2 (Lipin/Ned 96.5 0.0046 9.9E-08 58.0 5.5 53 321-373 1-67 (157)
192 COG2216 KdpB High-affinity K+ 96.4 0.018 3.8E-07 62.7 9.8 44 535-578 510-553 (681)
193 PLN02177 glycerol-3-phosphate 96.3 0.034 7.3E-07 62.0 12.1 40 518-561 176-215 (497)
194 PF09419 PGP_phosphatase: Mito 96.3 0.025 5.4E-07 53.8 9.6 61 315-375 37-107 (168)
195 PF12689 Acid_PPase: Acid Phos 96.3 0.12 2.5E-06 49.4 14.1 53 508-562 100-153 (169)
196 TIGR01533 lipo_e_P4 5'-nucleot 96.1 0.013 2.9E-07 59.9 6.8 59 318-376 74-161 (266)
197 PF05152 DUF705: Protein of un 95.4 0.087 1.9E-06 53.7 9.5 58 320-377 123-183 (297)
198 TIGR01680 Veg_Stor_Prot vegeta 95.4 0.055 1.2E-06 55.2 8.0 56 320-375 102-187 (275)
199 COG4030 Uncharacterized protei 95.2 0.032 7E-07 54.7 5.5 70 517-587 190-262 (315)
200 TIGR01691 enolase-ppase 2,3-di 95.2 0.12 2.7E-06 51.4 9.7 42 516-557 151-192 (220)
201 PF03767 Acid_phosphat_B: HAD 94.4 0.018 3.8E-07 57.8 1.4 58 318-375 71-157 (229)
202 KOG0209 P-type ATPase [Inorgan 94.3 0.38 8.2E-06 55.4 11.5 41 336-376 675-715 (1160)
203 PF11019 DUF2608: Protein of u 94.2 0.27 5.8E-06 50.1 9.4 41 512-552 156-196 (252)
204 PF03031 NIF: NLI interacting 94.1 0.041 8.8E-07 51.5 3.2 55 320-375 1-74 (159)
205 KOG0208 Cation transport ATPas 93.2 0.27 5.8E-06 57.6 8.1 41 335-375 704-744 (1140)
206 KOG2116 Protein involved in pl 92.5 0.13 2.8E-06 57.6 4.3 71 318-391 529-613 (738)
207 TIGR02250 FCP1_euk FCP1-like p 91.7 0.46 9.9E-06 44.7 6.5 57 318-375 5-96 (156)
208 TIGR02251 HIF-SF_euk Dullard-l 91.6 0.42 9.2E-06 45.2 6.1 55 320-375 2-80 (162)
209 COG4996 Predicted phosphatase 89.7 0.98 2.1E-05 40.9 6.2 55 321-375 2-80 (164)
210 TIGR02245 HAD_IIID1 HAD-superf 89.3 0.68 1.5E-05 45.2 5.5 58 317-375 19-83 (195)
211 KOG0205 Plasma membrane H+-tra 88.7 0.8 1.7E-05 51.6 6.0 56 519-578 573-628 (942)
212 PF11350 DUF3152: Protein of u 87.8 5 0.00011 39.1 10.1 144 91-261 10-159 (203)
213 COG4229 Predicted enolase-phos 87.6 10 0.00022 36.5 11.8 48 508-555 151-198 (229)
214 COG5083 SMP2 Uncharacterized p 87.5 0.49 1.1E-05 50.8 3.3 53 316-368 372-435 (580)
215 PF09419 PGP_phosphatase: Mito 87.5 1.7 3.7E-05 41.4 6.7 120 421-562 36-166 (168)
216 COG3882 FkbH Predicted enzyme 86.2 1.3 2.9E-05 48.3 5.8 56 318-373 221-292 (574)
217 PF06941 NT5C: 5' nucleotidase 85.7 0.81 1.8E-05 44.2 3.7 26 339-364 76-101 (191)
218 COG2217 ZntA Cation transport 81.0 7.3 0.00016 45.5 9.4 55 321-375 519-576 (713)
219 COG0560 SerB Phosphoserine pho 80.9 9.7 0.00021 37.7 9.2 83 336-427 77-159 (212)
220 KOG2134 Polynucleotide kinase 76.5 1.8 4E-05 46.0 2.6 43 318-360 74-128 (422)
221 PF04312 DUF460: Protein of un 73.4 5.5 0.00012 36.5 4.5 56 319-374 43-100 (138)
222 COG3700 AphA Acid phosphatase 72.3 4.6 9.9E-05 38.6 3.8 47 321-367 65-145 (237)
223 smart00731 SprT SprT homologue 70.8 12 0.00027 34.5 6.5 84 181-268 5-90 (146)
224 smart00775 LNS2 LNS2 domain. T 70.8 65 0.0014 30.1 11.4 38 518-555 102-140 (157)
225 COG2503 Predicted secreted aci 68.1 11 0.00024 37.9 5.6 59 317-375 77-165 (274)
226 PRK11590 hypothetical protein; 64.6 33 0.00072 33.5 8.5 75 338-421 97-172 (211)
227 TIGR01489 DKMTPPase-SF 2,3-dik 64.4 39 0.00084 31.7 8.7 41 336-376 72-112 (188)
228 KOG1618 Predicted phosphatase 63.8 7.9 0.00017 40.4 3.8 55 320-375 36-98 (389)
229 COG5639 Uncharacterized conser 63.8 2.9 6.4E-05 33.6 0.6 23 84-106 53-75 (77)
230 KOG3128 Uncharacterized conser 63.3 45 0.00098 33.9 8.9 31 523-553 215-247 (298)
231 TIGR01545 YfhB_g-proteo haloac 63.1 48 0.001 32.6 9.3 76 337-421 95-171 (210)
232 KOG0207 Cation transport ATPas 61.8 55 0.0012 38.9 10.5 58 318-375 702-762 (951)
233 cd04327 ZnMc_MMP_like_3 Zinc-d 60.4 5.6 0.00012 38.8 2.0 21 240-260 91-111 (198)
234 TIGR01533 lipo_e_P4 5'-nucleot 59.2 25 0.00053 36.2 6.6 72 469-549 132-203 (266)
235 PF00702 Hydrolase: haloacid d 59.2 9.4 0.0002 36.6 3.4 39 337-375 128-166 (215)
236 COG0546 Gph Predicted phosphat 58.4 17 0.00037 35.8 5.2 39 338-376 91-129 (220)
237 TIGR01454 AHBA_synth_RP 3-amin 57.6 14 0.00031 35.6 4.4 40 336-375 75-114 (205)
238 PRK10671 copA copper exporting 57.1 72 0.0016 38.3 11.0 57 319-375 630-689 (834)
239 PF06262 DUF1025: Possibl zinc 56.0 7.6 0.00017 33.5 1.9 40 217-257 50-89 (97)
240 TIGR01449 PGP_bact 2-phosphogl 55.3 17 0.00037 35.1 4.6 39 337-375 86-124 (213)
241 TIGR01422 phosphonatase phosph 55.1 18 0.00039 36.3 4.8 39 338-376 101-139 (253)
242 TIGR01548 HAD-SF-IA-hyp1 haloa 54.5 19 0.00042 34.5 4.8 34 342-375 112-145 (197)
243 cd04283 ZnMc_hatching_enzyme Z 54.4 6.7 0.00014 37.9 1.4 18 243-260 79-96 (182)
244 PF07759 DUF1615: Protein of u 54.2 62 0.0013 33.6 8.3 121 211-372 122-254 (319)
245 cd04268 ZnMc_MMP_like Zinc-dep 54.0 9.5 0.00021 35.5 2.4 22 238-259 91-112 (165)
246 KOG4549 Magnesium-dependent ph 53.5 40 0.00086 30.6 5.9 56 320-375 19-84 (144)
247 PRK13288 pyrophosphatase PpaX; 53.1 20 0.00044 34.8 4.7 40 337-376 83-122 (214)
248 PLN02954 phosphoserine phospha 52.4 23 0.0005 34.6 5.0 40 337-376 85-124 (224)
249 PRK11033 zntA zinc/cadmium/mer 52.1 29 0.00063 41.0 6.5 57 319-375 548-607 (741)
250 TIGR03351 PhnX-like phosphonat 51.6 18 0.00038 35.3 4.0 40 336-375 87-126 (220)
251 PF13419 HAD_2: Haloacid dehal 49.9 16 0.00034 33.4 3.2 40 337-376 78-117 (176)
252 TIGR01488 HAD-SF-IB Haloacid D 49.5 27 0.00059 32.4 4.8 39 337-375 74-112 (177)
253 cd04281 ZnMc_BMP1_TLD Zinc-dep 48.7 8.8 0.00019 37.7 1.3 18 244-261 90-107 (200)
254 COG4483 Uncharacterized protei 47.9 18 0.00039 28.6 2.6 27 522-552 6-32 (68)
255 TIGR02253 CTE7 HAD superfamily 47.9 25 0.00054 34.2 4.4 39 337-375 95-133 (221)
256 PRK11587 putative phosphatase; 47.7 31 0.00067 33.7 5.0 39 337-375 84-122 (218)
257 PRK10826 2-deoxyglucose-6-phos 47.6 33 0.00071 33.6 5.2 40 336-375 92-131 (222)
258 PLN02770 haloacid dehalogenase 47.5 32 0.00068 34.6 5.2 40 337-376 109-148 (248)
259 TIGR02137 HSK-PSP phosphoserin 46.9 1E+02 0.0023 30.0 8.6 39 336-375 68-106 (203)
260 PF01400 Astacin: Astacin (Pep 46.1 8.8 0.00019 37.3 0.8 17 243-259 81-97 (191)
261 cd04282 ZnMc_meprin Zinc-depen 46.1 10 0.00023 38.0 1.3 18 243-260 122-139 (230)
262 TIGR01428 HAD_type_II 2-haloal 45.8 32 0.0007 32.8 4.8 38 338-375 94-131 (198)
263 PRK09552 mtnX 2-hydroxy-3-keto 45.2 41 0.00089 33.0 5.5 39 336-375 74-112 (219)
264 COG3824 Predicted Zn-dependent 45.1 27 0.00058 31.2 3.5 41 218-258 86-126 (136)
265 cd04280 ZnMc_astacin_like Zinc 44.6 11 0.00023 36.3 1.1 19 242-260 75-93 (180)
266 TIGR01544 HAD-SF-IE haloacid d 44.6 57 0.0012 33.7 6.5 41 336-376 121-161 (277)
267 smart00235 ZnMc Zinc-dependent 44.5 12 0.00026 34.0 1.4 17 244-260 89-105 (140)
268 PLN03243 haloacid dehalogenase 43.2 34 0.00073 34.9 4.6 40 337-376 110-149 (260)
269 PRK13222 phosphoglycolate phos 43.1 37 0.0008 33.0 4.8 39 337-375 94-132 (226)
270 cd04279 ZnMc_MMP_like_1 Zinc-d 42.8 19 0.00041 33.5 2.5 22 239-260 102-123 (156)
271 PF01457 Peptidase_M8: Leishma 42.6 12 0.00027 42.2 1.4 37 214-257 190-226 (521)
272 PRK04351 hypothetical protein; 42.0 1.9E+02 0.0041 27.0 9.0 74 182-258 9-84 (149)
273 PLN02499 glycerol-3-phosphate 40.1 24 0.00053 39.3 3.1 23 320-342 9-31 (498)
274 PRK13225 phosphoglycolate phos 39.8 40 0.00087 34.6 4.6 39 337-375 143-181 (273)
275 TIGR01459 HAD-SF-IIA-hyp4 HAD- 39.1 51 0.0011 32.9 5.1 34 521-554 82-115 (242)
276 TIGR02009 PGMB-YQAB-SF beta-ph 38.6 42 0.00091 31.4 4.3 38 336-375 88-125 (185)
277 PRK13478 phosphonoacetaldehyde 37.4 40 0.00087 34.1 4.1 38 338-375 103-140 (267)
278 PF00413 Peptidase_M10: Matrix 37.2 20 0.00044 32.8 1.7 21 239-259 103-123 (154)
279 PF01863 DUF45: Protein of unk 35.6 43 0.00093 32.3 3.9 55 185-269 136-190 (205)
280 PRK14988 GMP/IMP nucleotidase; 35.5 54 0.0012 32.4 4.6 40 336-375 93-132 (224)
281 PRK13223 phosphoglycolate phos 34.9 51 0.0011 33.7 4.4 39 337-375 102-140 (272)
282 PF09949 DUF2183: Uncharacteri 34.4 1.6E+02 0.0035 25.5 6.7 71 480-552 8-83 (100)
283 TIGR01509 HAD-SF-IA-v3 haloaci 34.4 62 0.0013 30.0 4.6 38 337-375 86-123 (183)
284 PRK13226 phosphoglycolate phos 34.3 63 0.0014 31.9 4.9 39 337-375 96-134 (229)
285 PRK11133 serB phosphoserine ph 33.5 1.9E+02 0.0042 30.5 8.6 40 336-375 181-220 (322)
286 PLN02575 haloacid dehalogenase 33.1 62 0.0014 35.0 4.8 39 338-376 218-256 (381)
287 PF06014 DUF910: Bacterial pro 32.9 28 0.00061 27.5 1.6 27 522-552 6-32 (62)
288 PF14258 DUF4350: Domain of un 32.0 60 0.0013 25.6 3.5 23 336-358 46-69 (70)
289 TIGR03333 salvage_mtnX 2-hydro 31.8 77 0.0017 30.9 5.0 39 336-374 70-108 (214)
290 PF12689 Acid_PPase: Acid Phos 30.8 59 0.0013 31.0 3.8 58 319-376 3-86 (169)
291 PTZ00257 Glycoprotein GP63 (le 30.4 50 0.0011 37.9 3.7 37 214-257 236-272 (622)
292 TIGR02251 HIF-SF_euk Dullard-l 29.8 52 0.0011 30.9 3.2 33 525-557 103-135 (162)
293 cd04277 ZnMc_serralysin_like Z 29.1 36 0.00078 32.5 2.1 40 215-259 92-131 (186)
294 PF06189 5-nucleotidase: 5'-nu 29.0 95 0.0021 31.7 5.0 54 322-375 124-212 (264)
295 cd04278 ZnMc_MMP Zinc-dependen 28.8 36 0.00078 31.6 2.0 76 170-259 50-125 (157)
296 TIGR01549 HAD-SF-IA-v1 haloaci 28.4 71 0.0015 28.9 3.9 34 340-373 68-101 (154)
297 PRK13267 archaemetzincin-like 28.2 48 0.001 31.9 2.7 23 237-259 121-143 (179)
298 cd00203 ZnMc Zinc-dependent me 27.0 32 0.0007 31.9 1.3 21 239-259 94-114 (167)
299 TIGR02244 HAD-IG-Ncltidse HAD 26.7 1.1E+02 0.0025 32.5 5.4 37 337-373 185-221 (343)
300 PRK06698 bifunctional 5'-methy 26.6 77 0.0017 35.0 4.4 38 339-376 333-370 (459)
301 TIGR02244 HAD-IG-Ncltidse HAD 26.5 1.9E+02 0.0041 30.9 7.1 39 521-559 281-322 (343)
302 COG0021 TktA Transketolase [Ca 26.5 6.8E+02 0.015 29.1 11.5 96 321-421 181-279 (663)
303 cd04276 ZnMc_MMP_like_2 Zinc-d 25.8 46 0.001 32.6 2.1 45 215-259 90-134 (197)
304 PF14174 YycC: YycC-like prote 25.7 70 0.0015 24.0 2.5 20 220-239 5-24 (53)
305 PF12388 Peptidase_M57: Dual-a 24.8 47 0.001 32.8 2.0 20 239-258 131-150 (211)
306 TIGR02252 DREG-2 REG-2-like, H 24.5 1E+02 0.0022 29.4 4.4 38 337-375 106-143 (203)
307 PTZ00337 surface protease GP63 24.3 53 0.0011 37.5 2.5 36 214-258 211-246 (567)
308 COG2216 KdpB High-affinity K+ 24.3 1.1E+02 0.0024 34.4 4.7 47 336-385 447-493 (681)
309 PF07998 Peptidase_M54: Peptid 23.6 62 0.0013 31.6 2.5 23 237-259 141-163 (194)
310 COG4681 Uncharacterized protei 23.5 2.2E+02 0.0048 26.6 5.9 103 72-188 28-144 (181)
311 KOG3714 Meprin A metalloprotea 23.2 33 0.00072 37.5 0.7 17 244-260 162-178 (411)
312 PLN02779 haloacid dehalogenase 22.5 1.3E+02 0.0028 31.0 4.9 37 337-373 145-181 (286)
313 COG0637 Predicted phosphatase/ 22.5 1.4E+02 0.0029 29.5 4.8 39 337-375 87-125 (221)
314 PRK13582 thrH phosphoserine ph 22.4 1.2E+02 0.0027 28.8 4.5 37 338-375 70-106 (205)
315 PF05822 UMPH-1: Pyrimidine 5' 22.4 8.3E+02 0.018 24.8 11.8 127 461-589 96-244 (246)
316 TIGR01691 enolase-ppase 2,3-di 22.2 1.3E+02 0.0028 29.8 4.6 38 336-373 95-132 (220)
317 PF10038 DUF2274: Protein of u 22.1 36 0.00077 27.5 0.5 23 78-100 47-69 (69)
318 PRK13696 hypothetical protein; 21.4 3.3E+02 0.0072 21.6 5.6 37 230-269 18-60 (62)
319 TIGR01658 EYA-cons_domain eyes 21.4 1.6E+02 0.0035 29.9 4.9 53 515-567 211-263 (274)
320 TIGR02254 YjjG/YfnB HAD superf 21.3 1.3E+02 0.0029 28.9 4.5 38 337-375 98-135 (224)
321 KOG1605 TFIIF-interacting CTD 20.9 58 0.0012 33.4 1.8 18 317-334 87-104 (262)
322 KOG2469 IMP-GMP specific 5'-nu 20.9 85 0.0018 34.0 3.1 25 316-340 24-48 (424)
323 PF10263 SprT-like: SprT-like 20.9 5.3E+02 0.012 23.5 8.3 66 182-254 4-73 (157)
324 PRK09449 dUMP phosphatase; Pro 20.5 1.4E+02 0.003 29.0 4.4 38 337-375 96-133 (224)
325 COG2115 XylA Xylose isomerase 20.5 1.4E+02 0.003 31.6 4.4 56 230-285 273-337 (438)
326 TIGR01990 bPGM beta-phosphoglu 20.4 1.4E+02 0.0031 27.7 4.3 37 337-375 88-124 (185)
327 PRK04860 hypothetical protein; 20.1 4E+02 0.0088 25.1 7.2 79 188-269 17-96 (160)
No 1
>PLN02887 hydrolase family protein
Probab=100.00 E-value=1e-113 Score=950.86 Aligned_cols=547 Identities=75% Similarity=1.164 Sum_probs=478.8
Q ss_pred hhcccCCCCccccccCCCCCC----CCCCCCcccccccccccccccccccccchhhhhhhhhhhcccCC-Ccccccccee
Q 007731 38 AISFLNSPSISYKTHRLDASS----PSNSSPLFGRGFRVLCRREEESVVRSSRKVFAEQRGYRKARRRV-AKSKQKELEL 112 (591)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 112 (591)
+.++..++++||.++.+...+ +++++| |.+|||++++++.+ +|+||.+|+|||.|||| ||||++++++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (580)
T PLN02887 29 ARLLLQPSSLSFSPKTSNFNRLDVTSTEFSS-FRKGFHAFRSTKPR------GRVWAAHRGYRKIRRRAPPPKKEQELEL 101 (580)
T ss_pred hhhhcCccccccCCCCCCCccccCCCCchhh-HHHHHHHHhhcCcc------ccchhhhccCccccCCCCCCCcccceee
Confidence 334455556666543332211 224455 89999999999888 89999999999999985 7789999999
Q ss_pred EEEEEecCCCCChhHHHHHHHHhhhchhHHHHHHhhhcccccccccchhhhccCCCceeeEEEEEeChHHHHHHHHHHhC
Q 007731 113 NVSICIEDELPDDPEVLNIAEMLRLNAPTLMKLAFDSLKDSTYKTRDTAVEDVGGFESIELSILFCNNEFIRKLNKEWRD 192 (591)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~~~lN~~~r~ 192 (591)
.++|+||+++|+|+++.+++|.+|++||+||+.|+++|++|.|+|+++.|++++++...||||+||||++|++||++|||
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~elsv~~~~d~~i~~LN~~yr~ 181 (580)
T PLN02887 102 SVSICIEEDLPDDPEILNIAELLRLNVPMAMKLAFDGLKDSKYKTRDTDISDVGGYDSVELSVMLCNDDFIRKLNKEWRG 181 (580)
T ss_pred eEEEeeccCCCCCHHHHHHHHHHhhccHHHHHHHhhhcccccccccchHHHhcCCCCceEEEEEEECHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEeeccCCCCCCCCCccccccEEeeHHHHHHHHHHhCCCHHHHHHHHHHHhhhhhcCCCCCCCHHHHHHHHHHHH
Q 007731 193 EDHATDVLSMSQHVPELKLPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEEAEAEMEKNEE 272 (591)
Q Consensus 193 ~d~~TdVlSF~~~~~~~~~~~~~lGdi~i~~~~~~~~a~~~~~~~~~~~~~l~vHG~LHLlGyDh~~~~~~~~~M~~~e~ 272 (591)
+|+||||||||++.|+.+.+..+|||||||++++++||+|+|+++++|+.+|+|||+|||+||||+++++++++|+.+|+
T Consensus 182 ~d~~TDVLSF~~~~~~~~~~~~~lGDIvIs~~~~~~qA~e~~~s~~~el~~l~vHG~LHLlGyDH~~~~~~~~~M~~~e~ 261 (580)
T PLN02887 182 EDHATDVLSMSQHVPGLKLPVLMLGDIVISVETAARQAEERGHTLLDEIRILVVHGLLHLLGFDHEISNEAEAEMEKEEE 261 (580)
T ss_pred CCCCCcEEeccCcCCCCCCCCccceEEEEeHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 99999999999876655545568999999999999999999999999999999999999999999987777889999999
Q ss_pred HHHHhcCCcccCccccccccccchHHHHhhchhhhccccccccCCCceEEEEecCCCccCCCCCCCHHHHHHHHHHHhcC
Q 007731 273 FLLQSLGWKGKGLIQSAYDSETNTNIQVENSDDRKQEGSLRFYKPKFRYIFCDMDGTLLNSQSKISLTTAKALKEALSRG 352 (591)
Q Consensus 273 ~il~~l~~~~~gl~~~a~d~~~~~~~~l~~~~~~~~~~~l~~~~~~iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~G 352 (591)
+||++|||+++||++++||+++.++...+.++++++.+.++|++++||+|+|||||||+++++.+++.++++|++++++|
T Consensus 262 ~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl~ekG 341 (580)
T PLN02887 262 LLLKSLGWKGKGLIQSAYDAEKTQTDQLEKSDDRKKEGSLRFYKPKFSYIFCDMDGTLLNSKSQISETNAKALKEALSRG 341 (580)
T ss_pred HHHHHcCCCCCceeeeecccccccccccccccchhhhcchhhhccCccEEEEeCCCCCCCCCCccCHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEEcCCCcEEEeecCCHHHHHHHHHHHHhCCCCEEEEe
Q 007731 353 LKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVHGRQGREIFRRNLDRDFCREAYQYSWEHKVPLIAFS 432 (591)
Q Consensus 353 i~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~d~~g~~i~~~~l~~e~v~eil~~l~~~~i~~~i~~ 432 (591)
+.|++||||++..+..+++.+++...+++|+++++.|++||+.||+.+++.++...++.+.+.++++++.+.++.+.+++
T Consensus 342 i~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~NGA~I~d~~g~~I~~~~L~~e~v~eIi~~~~~~~i~~~~~~ 421 (580)
T PLN02887 342 VKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFLQGLLVYGRQGREIYRSNLDQEVCREACLYSLEHKIPLIAFS 421 (580)
T ss_pred CeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEeecCeEEEECCCcEEEEEeCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 99999999999999999999987656789999999999999999988888899999999999999999988888887888
Q ss_pred CCceeeecCCcccccccccccCCcccccccHHHhhcccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeee
Q 007731 433 GDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEI 512 (591)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI 512 (591)
.+.+|.....+........+.........++.++.....+.|+++...++.....+.+.+...+.+.+.++.+++.++||
T Consensus 422 ~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI 501 (580)
T PLN02887 422 QDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQLLAAADIQKVIFLDTAEGVSSVLRPYWSEATGDRANVVQAQPDMLEI 501 (580)
T ss_pred CCeEEEecCchHHHHHHHhhccccccccCCHHHhhcccCeeEEEEEcChHHHHHHHHHHHHHHhcCcEEEEEecCcEEEE
Confidence 87777543332221111111111111223344443334678888776655444456666666666778888898899999
Q ss_pred cCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecCCcHHHHhhcceecCCCChHHHHHHHHHhhC
Q 007731 513 VPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSNGSEKAKAVANVIGASNDEDGVADAIYRYAF 591 (591)
Q Consensus 513 ~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~~~~f 591 (591)
+|+++|||.||+++++++||+.++|+||||+.||++||+.+|+||||+||.+++|+.|++|+.+|+++||+++|++++|
T Consensus 502 ~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~~ 580 (580)
T PLN02887 502 VPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYRYAF 580 (580)
T ss_pred ecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999987
No 2
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=100.00 E-value=6.8e-42 Score=349.71 Aligned_cols=268 Identities=30% Similarity=0.410 Sum_probs=209.7
Q ss_pred CCceEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEE
Q 007731 317 PKFRYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLV 396 (591)
Q Consensus 317 ~~iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I 396 (591)
|++|+|+|||||||+++++.++++++++|++++++|+.|++||||++..+..+++.+++... ..+.|+.||+.|
T Consensus 1 m~~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~------~~~~I~~NGa~i 74 (270)
T PRK10513 1 MAIKLIAIDMDGTLLLPDHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQP------GDYCITNNGALV 74 (270)
T ss_pred CceEEEEEecCCcCcCCCCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCC------CCeEEEcCCeEE
Confidence 35899999999999999999999999999999999999999999999999999999887321 124577789999
Q ss_pred Ec-CCCcEEEeecCCHHHHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCeeEE
Q 007731 397 HG-RQGREIFRRNLDRDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQKL 475 (591)
Q Consensus 397 ~d-~~g~~i~~~~l~~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki 475 (591)
++ .+++.++..+++.+.+.++++.+++.++.+.+++.+.+|..............+..........+.++.....+.|+
T Consensus 75 ~~~~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 154 (270)
T PRK10513 75 QKAADGETVAQTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKV 154 (270)
T ss_pred EECCCCCEEEecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEE
Confidence 97 46788999999999999999999888887777777766643211100000000000000011122222222356777
Q ss_pred EEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCc
Q 007731 476 IFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASL 555 (591)
Q Consensus 476 ~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~ 555 (591)
++...++ ....+.+.+...+...+.++.+++.++||+|+++|||.||+++++++|++++++++||||.||++||+.+|+
T Consensus 155 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~ 233 (270)
T PRK10513 155 MMIDEPE-ILDAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGV 233 (270)
T ss_pred EEeCCHH-HHHHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCc
Confidence 7665443 334455555555556678888888899999999999999999999999999999999999999999999999
Q ss_pred eEEecCCcHHHHhhcceecCCCChHHHHHHHHHhhC
Q 007731 556 GIALSNGSEKAKAVANVIGASNDEDGVADAIYRYAF 591 (591)
Q Consensus 556 gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~~~~f 591 (591)
||||+||.+++|+.|++|+.+|+++||+++|+++++
T Consensus 234 ~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~~ 269 (270)
T PRK10513 234 GVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYVL 269 (270)
T ss_pred eEEecCccHHHHHhcCeeccCCCcchHHHHHHHHhc
Confidence 999999999999999999999999999999999863
No 3
>PRK10976 putative hydrolase; Provisional
Probab=100.00 E-value=3.9e-42 Score=350.84 Aligned_cols=261 Identities=24% Similarity=0.333 Sum_probs=206.4
Q ss_pred ceEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEEc
Q 007731 319 FRYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVHG 398 (591)
Q Consensus 319 iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~d 398 (591)
+|+|++||||||+++++.++++++++|++++++|++|++||||++..+..+++.+++ .++.|++||+.|++
T Consensus 2 ikli~~DlDGTLl~~~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~---------~~~~I~~NGa~i~~ 72 (266)
T PRK10976 2 YQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEI---------KSYMITSNGARVHD 72 (266)
T ss_pred ceEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCC---------CCeEEEcCCcEEEC
Confidence 799999999999999999999999999999999999999999999999999998887 23567788999998
Q ss_pred CCCcEEEeecCCHHHHHHHHHHHHhC-CCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCeeEEEE
Q 007731 399 RQGREIFRRNLDRDFCREAYQYSWEH-KVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQKLIF 477 (591)
Q Consensus 399 ~~g~~i~~~~l~~e~v~eil~~l~~~-~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki~~ 477 (591)
.+++.++..+++.+.+.++++.+.+. ++.+.++..+.+|.....+............ .. ...... +....+.|+.+
T Consensus 73 ~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~-~~~~~i~ki~~ 149 (266)
T PRK10976 73 TDGNLIFSHNLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFK-YQ-LYEPGL-LEPDGVSKVFF 149 (266)
T ss_pred CCCCEehhhcCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCc-ce-eechhh-cccCCceEEEE
Confidence 77788999999999999999988654 4445556666555432211110000000000 00 111111 12346778777
Q ss_pred ecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceE
Q 007731 478 LDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGI 557 (591)
Q Consensus 478 ~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gV 557 (591)
...+......+.+.+...++..+.++.+++.++||+|.++|||.||+++++++|++++++++|||+.||++||+.+|+||
T Consensus 150 ~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~v 229 (266)
T PRK10976 150 TCDSHEKLLPLEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGC 229 (266)
T ss_pred EcCCHHHHHHHHHHHHHHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCe
Confidence 65444434556666766666667888888889999999999999999999999999999999999999999999999999
Q ss_pred EecCCcHHHHhhcc--eecCCCChHHHHHHHHHhhC
Q 007731 558 ALSNGSEKAKAVAN--VIGASNDEDGVADAIYRYAF 591 (591)
Q Consensus 558 AmgNA~~elk~~Ad--~Vt~s~~edGVa~~L~~~~f 591 (591)
||+||.+++|+.|+ +|+.+|+++||+++|+++++
T Consensus 230 Am~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~~ 265 (266)
T PRK10976 230 IMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLYL 265 (266)
T ss_pred eecCCcHHHHHhCCCCeecccCchHHHHHHHHHHhh
Confidence 99999999999987 78999999999999999864
No 4
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=100.00 E-value=1.3e-41 Score=348.42 Aligned_cols=260 Identities=24% Similarity=0.329 Sum_probs=209.9
Q ss_pred CceEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEE
Q 007731 318 KFRYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVH 397 (591)
Q Consensus 318 ~iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~ 397 (591)
|+|+|++||||||+++++.++++++++|++++++|+.|++||||++..+..+++.+++ .++.|+.||+.|+
T Consensus 1 m~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~---------~~~~I~~NGa~I~ 71 (272)
T PRK15126 1 MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSL---------DAYLITGNGTRVH 71 (272)
T ss_pred CccEEEEeCCCcCcCCCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCC---------CCcEEecCCcEEE
Confidence 3799999999999999999999999999999999999999999999999999999887 2356778899999
Q ss_pred cCCCcEEEeecCCHHHHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCeeEEEE
Q 007731 398 GRQGREIFRRNLDRDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQKLIF 477 (591)
Q Consensus 398 d~~g~~i~~~~l~~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki~~ 477 (591)
+.+++.++...++.+.+.++++.+++.+..+.++..+.+|.....+............ . ...++.++ ....+.|+++
T Consensus 72 ~~~~~~l~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~-~~~~~~ki~~ 148 (272)
T PRK15126 72 SLEGELLHRQDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFR-Y-QLIDLKRL-PAHGVTKICF 148 (272)
T ss_pred cCCCCEEEeecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCc-e-EEecHHHc-cccCceEEEE
Confidence 8778889999999999999999998888877777776665432221111000000000 0 11122222 2245778777
Q ss_pred ecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceE
Q 007731 478 LDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGI 557 (591)
Q Consensus 478 ~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gV 557 (591)
+..++. ...+.+.+...++..+.++.++..++||+|+++|||.||+++++++||+++++++|||+.||++||+.+|+||
T Consensus 149 ~~~~~~-~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~v 227 (272)
T PRK15126 149 CGDHDD-LTRLQIQLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGF 227 (272)
T ss_pred ECCHHH-HHHHHHHHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCce
Confidence 765443 3456666766666667788888889999999999999999999999999999999999999999999999999
Q ss_pred EecCCcHHHHhhcce--ecCCCChHHHHHHHHHhh
Q 007731 558 ALSNGSEKAKAVANV--IGASNDEDGVADAIYRYA 590 (591)
Q Consensus 558 AmgNA~~elk~~Ad~--Vt~s~~edGVa~~L~~~~ 590 (591)
||+||.+++|+.|++ |+.+|+++||+++|++++
T Consensus 228 Am~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~ 262 (272)
T PRK15126 228 IMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWL 262 (272)
T ss_pred eccCChHHHHHhCCCCeecCCCcchHHHHHHHHHh
Confidence 999999999999986 888999999999999875
No 5
>COG0319 Predicted metal-dependent hydrolase [General function prediction only]
Probab=100.00 E-value=2.8e-41 Score=311.38 Aligned_cols=117 Identities=46% Similarity=0.658 Sum_probs=108.3
Q ss_pred ceeeEEEEEeChHHHHHHHHHHhCCCCCCcEeeccCCCCCCCCCccccccEEeeHHHHHHHHHHhCCCHHHHHHHHHHHh
Q 007731 169 ESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPELKLPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHG 248 (591)
Q Consensus 169 ~~~e~~i~~~~~~~~~~lN~~~r~~d~~TdVlSF~~~~~~~~~~~~~lGdi~i~~~~~~~~a~~~~~~~~~~~~~l~vHG 248 (591)
...||||+||||++||+||++|||||+||||||||++.|+....+.+|||||||+++|++||+|+|||+++|++||+|||
T Consensus 36 ~~~elsv~~vdd~ei~eLN~~yR~kD~pTDVLSFp~~e~~~~~~~~~LGDIvI~~~~~~~qA~e~g~s~~~e~~~l~vHG 115 (153)
T COG0319 36 STAELSVVLVDDAEIRELNLEYRGKDKPTDVLSFPYNEPGEAGEPPLLGDIVICPEVAEEQAKEQGHSLERELAHLTIHG 115 (153)
T ss_pred CCceEEEEEeCHHHHHHHHHHHcCCCCCCceEEecCCCCCCCCCCccceeeEEcHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 34799999999999999999999999999999999997765344568999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHHHHhcCCcccCcc
Q 007731 249 LLHLLGFDHEISEEAEAEMEKNEEFLLQSLGWKGKGLI 286 (591)
Q Consensus 249 ~LHLlGyDh~~~~~~~~~M~~~e~~il~~l~~~~~gl~ 286 (591)
+|||+||||++ ++|+++|+.+|++||..+|++.+++.
T Consensus 116 ~LHLlGYDH~~-~~e~~~M~~le~~iL~~l~~~~~~~~ 152 (153)
T COG0319 116 ILHLLGYDHEE-DEEEEEMEELEEEILAALGLSDPYLT 152 (153)
T ss_pred HHHHccCCCCC-chHHHHHHHHHHHHHHHcCCCccccC
Confidence 99999999986 68899999999999999999887653
No 6
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=100.00 E-value=4.8e-39 Score=327.84 Aligned_cols=259 Identities=31% Similarity=0.466 Sum_probs=201.2
Q ss_pred CCceEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEE
Q 007731 317 PKFRYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLV 396 (591)
Q Consensus 317 ~~iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I 396 (591)
|++|+|+|||||||+++++.++++++++|++++++|+.|+++|||++..+..+++.+++ .++.|+.||+.|
T Consensus 1 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~---------~~~~I~~NGa~i 71 (264)
T COG0561 1 MMIKLLAFDLDGTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGL---------DGPLITFNGALI 71 (264)
T ss_pred CCeeEEEEcCCCCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCC---------CccEEEeCCeEE
Confidence 46899999999999999999999999999999999999999999999999999999998 336677889999
Q ss_pred EcCCCcEEEeecCCHHHHHHHHHHHHhC-CCCEEEEeCCceeeecCCc-ccccccccccCCcccccccHHHhhcccCeeE
Q 007731 397 HGRQGREIFRRNLDRDFCREAYQYSWEH-KVPLIAFSGDRCLTLFDHP-LVDSLHTTYHEPKAEIIPAIEDLLATVDIQK 474 (591)
Q Consensus 397 ~d~~g~~i~~~~l~~e~v~eil~~l~~~-~i~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~k 474 (591)
++. ++.++..+++.+.+.++++.+.+. ......+..+.++...... ...... ...... ........ ... .+
T Consensus 72 ~~~-~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~---~~~-~~ 144 (264)
T COG0561 72 YNG-GELLFQKPLSREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARI-GFANLS-PVGREAAE---LED-NK 144 (264)
T ss_pred ecC-CcEEeeecCCHHHHHHHHHHHHhccCceEEEEeccceeeccCCCccccccc-cccccc-ccccchhh---cCc-ce
Confidence 987 899999999999999999999776 4555555555555443322 111000 000000 00011111 111 33
Q ss_pred EEEecChhhHHHhHHHHHHHhccCC-eEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHC
Q 007731 475 LIFLDTAEGVATTIRPYWSEATKDR-ANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELA 553 (591)
Q Consensus 475 i~~~~~~~~~~~~l~~~l~~~~~~~-~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~a 553 (591)
+............+...+...+... ..+..+.+.++||+|+++|||.|++++++++|+++++|+|||||.||++||+.+
T Consensus 145 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~a 224 (264)
T COG0561 145 IIALDKDHEILEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVA 224 (264)
T ss_pred EEEEecChHhHHHHHHHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhc
Confidence 4444443444445555566555543 455555555699999999999999999999999999999999999999999999
Q ss_pred CceEEecCCcHHHHhhcceecCCCChHHHHHHHHHhhC
Q 007731 554 SLGIALSNGSEKAKAVANVIGASNDEDGVADAIYRYAF 591 (591)
Q Consensus 554 g~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~~~~f 591 (591)
|+||||+||.+++|+.|++++.+|+++||+++|+++++
T Consensus 225 g~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 225 GLGVAMGNADEELKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred CeeeeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence 99999999999999999999999999999999999864
No 7
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=100.00 E-value=8e-39 Score=326.93 Aligned_cols=264 Identities=23% Similarity=0.284 Sum_probs=201.1
Q ss_pred CCceEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEE
Q 007731 317 PKFRYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLV 396 (591)
Q Consensus 317 ~~iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I 396 (591)
|++|+|+|||||||+++++.++++++++|++++++|+.|++||||++..+..+++.+++ .++.|+.||+.|
T Consensus 1 M~~kli~~DlDGTLl~~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~---------~~~~I~~NGa~i 71 (272)
T PRK10530 1 MTYRVIALDLDGTLLTPKKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALAL---------DTPAICCNGTYL 71 (272)
T ss_pred CCccEEEEeCCCceECCCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCC---------CCCEEEcCCcEE
Confidence 35899999999999999999999999999999999999999999999999999998886 245678889999
Q ss_pred EcC-CCcEEEeecCCHHHHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccc---cccccC---CcccccccHHHhhc-
Q 007731 397 HGR-QGREIFRRNLDRDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSL---HTTYHE---PKAEIIPAIEDLLA- 468 (591)
Q Consensus 397 ~d~-~g~~i~~~~l~~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~l~~~l~- 468 (591)
++. +++.++..+++.+.+.++++.+++.++...++..+.++........... ...... +......++.+.+.
T Consensus 72 ~d~~~~~~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (272)
T PRK10530 72 YDYQAKKVLEADPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQ 151 (272)
T ss_pred EecCCCEEEEecCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhh
Confidence 984 6778899999999999999999988877666666654432211111000 000000 00111222322222
Q ss_pred ccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHH
Q 007731 469 TVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVE 548 (591)
Q Consensus 469 ~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~ 548 (591)
...+.++.....+......+.+.+.+.++ +.+..+...++|+++.+++||.|++++++++|++++++++||||.||++
T Consensus 152 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~ 229 (272)
T PRK10530 152 VNAIWKFALTHEDLPQLQHFAKHVEHELG--LECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDIS 229 (272)
T ss_pred cCCcEEEEEecCCHHHHHHHHHHHhhhcC--ceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHH
Confidence 22344554443332222334444443333 4455566678999999999999999999999999999999999999999
Q ss_pred HHHHCCceEEecCCcHHHHhhcceecCCCChHHHHHHHHHhhC
Q 007731 549 MLELASLGIALSNGSEKAKAVANVIGASNDEDGVADAIYRYAF 591 (591)
Q Consensus 549 Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~~~~f 591 (591)
|++.+|+||+|+|+.+++|+.|++|+.+|+++||+++|+++++
T Consensus 230 m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~l 272 (272)
T PRK10530 230 MLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIYSHVL 272 (272)
T ss_pred HHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999864
No 8
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=100.00 E-value=1.6e-38 Score=317.83 Aligned_cols=254 Identities=34% Similarity=0.517 Sum_probs=209.2
Q ss_pred EEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEEcCCC
Q 007731 322 IFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVHGRQG 401 (591)
Q Consensus 322 I~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~d~~g 401 (591)
|+|||||||+++++.++++++++|++|+++|+.+++||||++..+..++..+++. .+.|+.||+.+++..+
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~---------~~~I~~nGa~i~~~~~ 71 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID---------DYFICSNGALIDDPKG 71 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC---------SEEEEGGGTEEEETTT
T ss_pred cEEEECCceecCCCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch---------hhhcccccceeeeccc
Confidence 7999999999999999999999999999999999999999999999999999872 3556677888866889
Q ss_pred cEEEeecCCHHHHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCeeEEEEecCh
Q 007731 402 REIFRRNLDRDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQKLIFLDTA 481 (591)
Q Consensus 402 ~~i~~~~l~~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki~~~~~~ 481 (591)
+.++...++.+.+.++++.+.++++.+.+++.+.+|.................. ...............+.++.+..+.
T Consensus 72 ~~l~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~ki~~~~~~ 150 (254)
T PF08282_consen 72 KILYEKPIDSDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFN-FKESIVSEDDLEDEEIFKILFFPDP 150 (254)
T ss_dssp EEEEEESB-HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTS-CEEEESHHHHHHCSSESEEEEESCH
T ss_pred ccchhhheeccchhheeehhhhcccccccccceeeecccccccchhhhhhcccc-cccccccccccccccceeeeccccc
Confidence 999999999999999999999999999999988887765511111000001111 1111122233345678888855544
Q ss_pred hhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecC
Q 007731 482 EGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSN 561 (591)
Q Consensus 482 ~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgN 561 (591)
+ ....+.+.+...+.....++.++..++||+|.++|||.|++++++++|++++++++||||.||++||+.+|+||||+|
T Consensus 151 ~-~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~n 229 (254)
T PF08282_consen 151 E-DLEQLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGN 229 (254)
T ss_dssp H-HHHHHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETT
T ss_pred h-hhhhhhhhhccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcC
Confidence 4 455677888888877778889999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHhhcceecCCCChHHHHHHH
Q 007731 562 GSEKAKAVANVIGASNDEDGVADAI 586 (591)
Q Consensus 562 A~~elk~~Ad~Vt~s~~edGVa~~L 586 (591)
|.+++|+.|++++.+++++||+++|
T Consensus 230 a~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 230 ATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp S-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred CCHHHHHhCCEEecCCCCChHHHhC
Confidence 9999999999999999999999986
No 9
>PRK13963 unkown domain/putative metalloprotease fusion protein; Provisional
Probab=100.00 E-value=3.6e-39 Score=314.70 Aligned_cols=144 Identities=32% Similarity=0.444 Sum_probs=125.7
Q ss_pred ccccceeEEEEEec------CCCCChhHHHHHHHHhhhchhHHHHHHhhhcccccccccchhhhccCCCceeeEEEEEeC
Q 007731 106 KQKELELNVSICIE------DELPDDPEVLNIAEMLRLNAPTLMKLAFDSLKDSTYKTRDTAVEDVGGFESIELSILFCN 179 (591)
Q Consensus 106 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~i~~~~ 179 (591)
....++|+||+..+ ..||....+.+|++.+ +. ...||||+|||
T Consensus 108 ~~~~l~l~vq~~~~~~~~~~~~lp~~~~i~~~i~~a-----------l~--------------------~~~eLsv~fVd 156 (258)
T PRK13963 108 REPELDLTVQYGDEIGGAQRKALPKRKLIAEWIEPA-----------LF--------------------ADAQLTVRFVG 156 (258)
T ss_pred ccCceEEEEEeecccccccccCCCCHHHHHHHHHHH-----------hC--------------------cCceEEEEEEC
Confidence 34467899998864 2389988999999862 21 13799999999
Q ss_pred hHHHHHHHHHHhCCCCCCcEeeccCCCCCCCCCccccccEEeeHHHHHHHHHHhCCCHHHHHHHHHHHhhhhhcCCCCCC
Q 007731 180 NEFIRKLNKEWRDEDHATDVLSMSQHVPELKLPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEI 259 (591)
Q Consensus 180 ~~~~~~lN~~~r~~d~~TdVlSF~~~~~~~~~~~~~lGdi~i~~~~~~~~a~~~~~~~~~~~~~l~vHG~LHLlGyDh~~ 259 (591)
+++|++||++|||||+||||||||++.++. ..+|||||||++++.+||+++|+++++|++||+|||+|||+||||++
T Consensus 157 deeir~LN~~YR~kD~pTDVLSFp~~e~~~---~~~LGDIvIc~e~v~rqA~e~~~sl~~El~~LlIHGlLHLLGYDHe~ 233 (258)
T PRK13963 157 EEEGRTLNRGYRGKDYATNVLTFAYAEEPD---GPVIGDLVLCCPVVEKEAREQGKPLEAHYAHLLVHGALHAQGYDHED 233 (258)
T ss_pred HHHHHHHHHHHcCCCCCCeEEeecCCCCCC---CCcceeEEEEHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCCCC
Confidence 999999999999999999999999874321 24799999999999999999999999999999999999999999985
Q ss_pred CHHHHHHHHHHHHHHHHhcCCcccC
Q 007731 260 SEEAEAEMEKNEEFLLQSLGWKGKG 284 (591)
Q Consensus 260 ~~~~~~~M~~~e~~il~~l~~~~~g 284 (591)
++|+++|+++|++||++||+.+++
T Consensus 234 -deEa~~Me~lE~~IL~~Lg~~~PY 257 (258)
T PRK13963 234 -DEDAAEMEALETDILAKLGFPNPY 257 (258)
T ss_pred -hHHHHHHHHHHHHHHHHcCCCCCC
Confidence 889999999999999999998865
No 10
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=100.00 E-value=1.2e-36 Score=308.89 Aligned_cols=254 Identities=33% Similarity=0.496 Sum_probs=200.0
Q ss_pred EEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEEcCC
Q 007731 321 YIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVHGRQ 400 (591)
Q Consensus 321 lI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~d~~ 400 (591)
+|+|||||||++.++.+++++.++|++++++|+.|++||||++..+..+++.+++ ..+.|+.||+.|++.+
T Consensus 1 li~~DlDGTLl~~~~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~---------~~~~I~~NGa~i~~~~ 71 (256)
T TIGR00099 1 LIFIDLDGTLLNDDHTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGL---------DTPFITANGAAVIDDQ 71 (256)
T ss_pred CEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCC---------CCCEEEcCCcEEECCC
Confidence 5899999999999889999999999999999999999999999999999998886 2356777899999876
Q ss_pred CcEEEeecCCHHHHHHHHHHHHhCCCCEEEEeCCceeeecCCc-ccccccccccCCcccccccHHHhhcccCeeEEEEec
Q 007731 401 GREIFRRNLDRDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHP-LVDSLHTTYHEPKAEIIPAIEDLLATVDIQKLIFLD 479 (591)
Q Consensus 401 g~~i~~~~l~~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki~~~~ 479 (591)
++.++..+++.+.+.++++.+.+.++.+.+++.+..|.....+ ............. ....+... .....+.++.+..
T Consensus 72 ~~~i~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~ 149 (256)
T TIGR00099 72 GEILYKKPLDLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPK-LEVVDIQY-LPDDILKILLLFL 149 (256)
T ss_pred CCEEeecCCCHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCc-ceeccchh-hhcccceEEEEEC
Confidence 7889999999999999999999988777777777665432211 1111111111110 00111111 1123455666555
Q ss_pred ChhhHHHhHHHHHHH-hccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEE
Q 007731 480 TAEGVATTIRPYWSE-ATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIA 558 (591)
Q Consensus 480 ~~~~~~~~l~~~l~~-~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVA 558 (591)
+.. ....+.+.+.. .+...+.++.++..++||+|+++|||.|++++++++|++++++++||||.||++|++.+|++||
T Consensus 150 ~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a 228 (256)
T TIGR00099 150 DPE-DLDLLIEALNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVA 228 (256)
T ss_pred CHH-HHHHHHHHhhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeE
Confidence 443 33445555552 3445677788888899999999999999999999999999999999999999999999999999
Q ss_pred ecCCcHHHHhhcceecCCCChHHHHHHH
Q 007731 559 LSNGSEKAKAVANVIGASNDEDGVADAI 586 (591)
Q Consensus 559 mgNA~~elk~~Ad~Vt~s~~edGVa~~L 586 (591)
|+|+.+++|+.|++++.+|+++||+++|
T Consensus 229 ~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 229 MGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 9999999999999999999999999875
No 11
>TIGR00043 metalloprotein, YbeY/UPF0054 family. This minimally protein family is represented by a single member sequence only in nearly every bacterium. Crystallography demonstrates metal-binding activity, possibly to nickel. It is a predicted to be a metallohydrolase, and somewhat more weakly to be a metalloproteinase.
Probab=100.00 E-value=5.8e-38 Score=275.86 Aligned_cols=107 Identities=55% Similarity=0.762 Sum_probs=98.4
Q ss_pred eEEEEEeChHHHHHHHHHHhCCCCCCcEeeccCCCCC--CCCCccccccEEeeHHHHHHHHHHhCCCHHHHHHHHHHHhh
Q 007731 172 ELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPE--LKLPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGL 249 (591)
Q Consensus 172 e~~i~~~~~~~~~~lN~~~r~~d~~TdVlSF~~~~~~--~~~~~~~lGdi~i~~~~~~~~a~~~~~~~~~~~~~l~vHG~ 249 (591)
+|||.|||+++|++||++|||+|+||||||||++.+. ...+...|||||||++++.|||+++|+++++|+++|+|||+
T Consensus 2 ~vsi~~v~~~~i~~lN~~yr~~d~~TDVLSF~~~~~~~~~~~~~~~lGdI~Is~~~~~~qa~~~~~~~~~e~~~l~iHG~ 81 (110)
T TIGR00043 2 ELSLLFVDDEEIQELNREYRDKDYPTDVLSFPYEEEEPPDGFPEEVLGDIVISLEVAKEQAKEYGHSLERELAHLTVHGL 81 (110)
T ss_pred EEEEEEECHHHHHHHHHHHhCCCCCCceEeecccCCcccccCCCCcceeEEEcHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 7999999999999999999999999999999987543 22344579999999999999999999999999999999999
Q ss_pred hhhcCCCCCCCHHHHHHHHHHHHHHHHhcC
Q 007731 250 LHLLGFDHEISEEAEAEMEKNEEFLLQSLG 279 (591)
Q Consensus 250 LHLlGyDh~~~~~~~~~M~~~e~~il~~l~ 279 (591)
|||+||||++ ++++++|+++|++||+.||
T Consensus 82 LHLlGyDH~~-~~~~~~M~~~E~~il~~l~ 110 (110)
T TIGR00043 82 LHLLGYDHET-EDEEKEMFALEEEILALLG 110 (110)
T ss_pred HHHcCCCCCC-hHHHHHHHHHHHHHHHHcC
Confidence 9999999986 7888999999999999875
No 12
>PRK00016 metal-binding heat shock protein; Provisional
Probab=100.00 E-value=1.6e-36 Score=284.14 Aligned_cols=115 Identities=48% Similarity=0.588 Sum_probs=102.9
Q ss_pred ceeeEEEEEeChHHHHHHHHHHhCCCCCCcEeeccCCCCCCC-----CCccccccEEeeHHHHHHHHHHhCCCHHHHHHH
Q 007731 169 ESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPELK-----LPILMLGDIVISVETAARQAEERGHSLLDEIRI 243 (591)
Q Consensus 169 ~~~e~~i~~~~~~~~~~lN~~~r~~d~~TdVlSF~~~~~~~~-----~~~~~lGdi~i~~~~~~~~a~~~~~~~~~~~~~ 243 (591)
...+|+|+|||+++|++||++|||+|+||||||||++..... .....|||||||+++|.+||+++|+++++|+++
T Consensus 36 ~~~ev~i~~v~~~~i~~lN~~yr~~d~~TDVLSFp~~~~~~~~~~~~~~~~~LGDI~Is~~~~~~qa~~~~~s~~~e~~~ 115 (159)
T PRK00016 36 PEAELSIRLVDNEEIRELNLEYRGKDKPTDVLSFPMDELPLLEDDGEEGPAYLGDIVICPEVAEEQAEEQGHSLERELAH 115 (159)
T ss_pred CCeeEEEEEECcHHHHHHHHHHcCCCCCCcEEeccccccCccccccccCCcCceeEEEcHHHHHHHHHHcCCCHHHHHHH
Confidence 347999999999999999999999999999999998632111 123479999999999999999999999999999
Q ss_pred HHHHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhcCCcccC
Q 007731 244 LMVHGLLHLLGFDHEISEEAEAEMEKNEEFLLQSLGWKGKG 284 (591)
Q Consensus 244 l~vHG~LHLlGyDh~~~~~~~~~M~~~e~~il~~l~~~~~g 284 (591)
|+|||+|||+||||++ ++++++|+.+|++||+.||+.+++
T Consensus 116 l~iHG~LHLlGYDH~~-~~e~~~M~~~E~~il~~l~~~~~~ 155 (159)
T PRK00016 116 LTVHGILHLLGYDHIE-DEEAEEMFGLEEEILAALGLPRPY 155 (159)
T ss_pred HHHHhhHHhcCCCCCC-hHHHHHHHHHHHHHHHHcCCCCcc
Confidence 9999999999999986 788999999999999999987754
No 13
>PF02130 UPF0054: Uncharacterized protein family UPF0054; InterPro: IPR002036 These, as yet, uncharacterised proteins are of 17 to 21 kDa. They contain a conserved region with three histidines at the C terminus. The protein family is represented by a single member sequence only in nearly every bacterium. The crystal structure of the protein from the hyperthermophilic bacteria Aquifex aeolicus has been determined. The overall fold consists of one central alpha-helix surrounded by a four-stranded beta-sheet and four other alpha-helices. Structure-based homology analysis reveals a good resemblance to the metal-dependent proteinases such as collagenases and gelatinases. However, experimental tests for collagenase and gelatinase-type function show no detectable activity under standard assay conditions [].; GO: 0046872 metal ion binding; PDB: 1TVI_A 1OZ9_A 1XM5_A 1XAX_A.
Probab=100.00 E-value=4e-37 Score=284.75 Aligned_cols=110 Identities=55% Similarity=0.795 Sum_probs=92.7
Q ss_pred ceeeEEEEEeChHHHHHHHHHHhCCCCCCcEeeccCCCCCCCCC---ccccccEEeeHHHHHHHHHHhCCCHHHHHHHHH
Q 007731 169 ESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPELKLP---ILMLGDIVISVETAARQAEERGHSLLDEIRILM 245 (591)
Q Consensus 169 ~~~e~~i~~~~~~~~~~lN~~~r~~d~~TdVlSF~~~~~~~~~~---~~~lGdi~i~~~~~~~~a~~~~~~~~~~~~~l~ 245 (591)
...+|+|+|||+++|++||++|||+|+||||||||++.+..... ...|||||||+++|.+||+++|+++++|+++|+
T Consensus 33 ~~~el~i~fv~~~~i~~LN~~yr~~d~pTDVLSFp~~~~~~~~~~~~~~~lGdI~Is~~~~~~qA~e~~~~~~~el~~l~ 112 (145)
T PF02130_consen 33 PDFELSIVFVDDEEIRELNKQYRGKDYPTDVLSFPYDEPEEPISPLPFEYLGDIFISPDTAERQAEEYGHSFEEELARLL 112 (145)
T ss_dssp CCCEEEEEEE-HHHHHHHHHHHHS-SSS-SEEEEE--SSSTTEE-E---EEEEEEEEHHHHHHHHHHCTS-HHHHHHHHH
T ss_pred CCCeEEEEEECHHHHHHHHHHHcCCCCCCeEEeECCCCCcccccccccccCceEEECHHHHHHHHHHccCChHHHHhHHH
Confidence 33499999999999999999999999999999999986543221 125999999999999999999999999999999
Q ss_pred HHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhcC
Q 007731 246 VHGLLHLLGFDHEISEEAEAEMEKNEEFLLQSLG 279 (591)
Q Consensus 246 vHG~LHLlGyDh~~~~~~~~~M~~~e~~il~~l~ 279 (591)
|||+|||+||||++ ++++++|+++|++||++||
T Consensus 113 vHG~LHLlGyDH~~-~~~~~~M~~~E~~il~~lg 145 (145)
T PF02130_consen 113 VHGLLHLLGYDHET-EEEAEEMEALEEEILKKLG 145 (145)
T ss_dssp HHHHHHHTT-SSTT-THHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCCCC-HHHHHHHHHHHHHHHHhcC
Confidence 99999999999985 7899999999999999987
No 14
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=100.00 E-value=7.1e-35 Score=290.65 Aligned_cols=229 Identities=28% Similarity=0.430 Sum_probs=172.0
Q ss_pred CCceEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEE
Q 007731 317 PKFRYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLV 396 (591)
Q Consensus 317 ~~iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I 396 (591)
|++|+|+|||||||+++++.+++++.++|++++++|++|++||||+...+..+++.+++ +++.|+.||+.+
T Consensus 1 m~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~---------~~~~i~~nGa~i 71 (230)
T PRK01158 1 MKIKAIAIDIDGTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGT---------SGPVIAENGGVI 71 (230)
T ss_pred CceeEEEEecCCCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCC---------CCcEEEecCeEE
Confidence 35799999999999999999999999999999999999999999999999999988887 235667789999
Q ss_pred EcC-CCcEEEeecCCHHHHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCeeEE
Q 007731 397 HGR-QGREIFRRNLDRDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQKL 475 (591)
Q Consensus 397 ~d~-~g~~i~~~~l~~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki 475 (591)
++. .++.++...++ .+.++++.+.+...... ..+.. ... .+ ....+
T Consensus 72 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-----~~~~~-~~~-------~~------------------~~~~~ 118 (230)
T PRK01158 72 SVGFDGKRIFLGDIE--ECEKAYSELKKRFPEAS-----TSLTK-LDP-------DY------------------RKTEV 118 (230)
T ss_pred EEcCCCCEEEEcchH--HHHHHHHHHHHhccccc-----eeeec-CCc-------cc------------------cccee
Confidence 874 46677777764 35566666554311100 00000 000 00 00011
Q ss_pred EEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCc
Q 007731 476 IFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASL 555 (591)
Q Consensus 476 ~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~ 555 (591)
.+... .. ...+.+.++. ++..+.++.+. .++|++++++|||.|++++++++|++++++++|||+.||++||+.+|+
T Consensus 119 ~~~~~-~~-~~~~~~~l~~-~~~~~~~~~~~-~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~ 194 (230)
T PRK01158 119 ALRRT-VP-VEEVRELLEE-LGLDLEIVDSG-FAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGF 194 (230)
T ss_pred eeccc-cc-HHHHHHHHHH-cCCcEEEEecc-eEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCc
Confidence 11111 11 1223333332 23334444443 578999999999999999999999999999999999999999999999
Q ss_pred eEEecCCcHHHHhhcceecCCCChHHHHHHHHHhhC
Q 007731 556 GIALSNGSEKAKAVANVIGASNDEDGVADAIYRYAF 591 (591)
Q Consensus 556 gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~~~~f 591 (591)
+|||+||.+++|+.|++|+.+|+++||+++|+++++
T Consensus 195 ~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~~~~ 230 (230)
T PRK01158 195 GVAVANADEELKEAADYVTEKSYGEGVAEAIEHLLL 230 (230)
T ss_pred eEEecCccHHHHHhcceEecCCCcChHHHHHHHHhC
Confidence 999999999999999999999999999999999875
No 15
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=100.00 E-value=2.6e-33 Score=287.00 Aligned_cols=247 Identities=16% Similarity=0.219 Sum_probs=180.4
Q ss_pred CceEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEE
Q 007731 318 KFRYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVH 397 (591)
Q Consensus 318 ~iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~ 397 (591)
.+|+|++||||||+++++.+++.++++|++++++|++|++||||+...+..+++.+++.. .+.|+.||+.||
T Consensus 6 ~~~lI~~DlDGTLL~~~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~--------~~~I~~NGa~I~ 77 (271)
T PRK03669 6 DPLLIFTDLDGTLLDSHTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQG--------LPLIAENGAVIQ 77 (271)
T ss_pred CCeEEEEeCccCCcCCCCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCC--------CcEEEeCCCEEE
Confidence 478999999999999888899999999999999999999999999999999999998721 245667788888
Q ss_pred cCCC------cEEEeecCCHHHHHHHHHHHHhC-CCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhccc
Q 007731 398 GRQG------REIFRRNLDRDFCREAYQYSWEH-KVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATV 470 (591)
Q Consensus 398 d~~g------~~i~~~~l~~e~v~eil~~l~~~-~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 470 (591)
+..+ ..++...++.+.+.++++.+++. ++.+..+.... .. .... +.... .....+... ..
T Consensus 78 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~---~~~~-~~~~~-~~~~~~~~~--~~ 144 (271)
T PRK03669 78 LDEQWQDHPDFPRIISGISHGEIRQVLNTLREKEGFKFTTFDDVD------DA---TIAE-WTGLS-RSQAALARL--HE 144 (271)
T ss_pred ecCcccCCCCceEeecCCCHHHHHHHHHHHHHhcCCceeecccCC------HH---HHHH-HhCCC-HHHHHHHhc--cc
Confidence 6422 24567789999999999988776 55443332210 00 0000 00000 000011111 11
Q ss_pred CeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCC---CCCcEEEEecChhhH
Q 007731 471 DIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGV---STKEIMAIGDGENDV 547 (591)
Q Consensus 471 ~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI---~~eeviafGDs~NDi 547 (591)
...++.+...+ .....+.+.+.. ..+.++.++ .++||+++++|||.|++++++++|+ +.+++++||||.||+
T Consensus 145 ~~~~~~~~~~~-~~~~~~~~~l~~---~~~~~~~~~-~~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi 219 (271)
T PRK03669 145 ASVTLIWRDSD-ERMAQFTARLAE---LGLQFVQGA-RFWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDA 219 (271)
T ss_pred cCceeEecCCH-HHHHHHHHHHHH---CCCEEEecC-eeEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHH
Confidence 12344443333 333445555543 135555544 6899999999999999999999999 999999999999999
Q ss_pred HHHHHCCceEEecCCc-HH-----HHhhcceecCCCChHHHHHHHHHhh
Q 007731 548 EMLELASLGIALSNGS-EK-----AKAVANVIGASNDEDGVADAIYRYA 590 (591)
Q Consensus 548 ~Mlk~ag~gVAmgNA~-~e-----lk~~Ad~Vt~s~~edGVa~~L~~~~ 590 (591)
+||+.+|+||||+|+. +. ++..|++++..+.++||.++|++++
T Consensus 220 ~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~~~ 268 (271)
T PRK03669 220 PLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDHFF 268 (271)
T ss_pred HHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHHHH
Confidence 9999999999999877 32 4557999999999999999999875
No 16
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=100.00 E-value=2.7e-32 Score=270.93 Aligned_cols=219 Identities=25% Similarity=0.377 Sum_probs=161.4
Q ss_pred EEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEEcCCC
Q 007731 322 IFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVHGRQG 401 (591)
Q Consensus 322 I~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~d~~g 401 (591)
|+|||||||+++++.+++++.++|++++++|+.|++||||++..+..+++.+++ .. +.|+.||+.|++..+
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~--~~-------~~i~~nGa~i~~~~~ 71 (225)
T TIGR01482 1 IASDIDGTLTDPNRAINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGT--PD-------PVIAENGGEISYNEG 71 (225)
T ss_pred CeEeccCccCCCCcccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCC--CC-------eEEEecCcEEEeCCC
Confidence 689999999999999999999999999999999999999999999999998885 22 455667888886443
Q ss_pred -cEEEeecCCHHHHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCeeEEEEecC
Q 007731 402 -REIFRRNLDRDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQKLIFLDT 480 (591)
Q Consensus 402 -~~i~~~~l~~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki~~~~~ 480 (591)
+.++...++..+......... ... ......+ + ......++....+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~~~~~--~------------~~~~~~~~~~~~~ 117 (225)
T TIGR01482 72 MDDIFLAYLEEEWFLDIVIAKT---FPF-----------------SRLKVQY--P------------RRASLVKMRYGID 117 (225)
T ss_pred CceEEecccCHHHHHHHHHhcc---cch-----------------hhhcccc--c------------cccceEEEeecCC
Confidence 556666676655433221110 000 0000000 0 0112223333332
Q ss_pred hhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEec
Q 007731 481 AEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALS 560 (591)
Q Consensus 481 ~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmg 560 (591)
.+. ...+.+. ++..+.+. ++..++|++|++++||.|++++++++|++++++++|||+.||++||+.+|+||||+
T Consensus 118 ~~~-~~~~~~~----~~~~~~~~-~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~ 191 (225)
T TIGR01482 118 VDT-VREIIKE----LGLNLVAV-DSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAVA 191 (225)
T ss_pred HHH-HHHHHHh----cCceEEEe-cCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEcC
Confidence 222 2222222 22223333 45578999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHhhcceecCCCChHH----HHHHHHHh
Q 007731 561 NGSEKAKAVANVIGASNDEDG----VADAIYRY 589 (591)
Q Consensus 561 NA~~elk~~Ad~Vt~s~~edG----Va~~L~~~ 589 (591)
||.+++|+.|++|+.+|+++| |+++|++|
T Consensus 192 Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~~~ 224 (225)
T TIGR01482 192 NAQPELKEWADYVTESPYGEGGAEAIGEILQAI 224 (225)
T ss_pred ChhHHHHHhcCeecCCCCCCcHHHHHHHHHHhh
Confidence 999999999999999999999 99999886
No 17
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=100.00 E-value=6.3e-32 Score=277.09 Aligned_cols=246 Identities=20% Similarity=0.231 Sum_probs=179.7
Q ss_pred CCceEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEE
Q 007731 317 PKFRYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLV 396 (591)
Q Consensus 317 ~~iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I 396 (591)
+|+|+|++||||||++++..+++.++++|++++++|+.+++||||+...+..+++.+++. .+.|+.||+.|
T Consensus 2 ~~~kli~~DlDGTLl~~~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~---------~~~i~~nGa~i 72 (273)
T PRK00192 2 MMKLLVFTDLDGTLLDHHTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE---------DPFIVENGAAI 72 (273)
T ss_pred CcceEEEEcCcccCcCCCCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC---------CCEEEEcCcEE
Confidence 468999999999999988889999999999999999999999999999999999998872 24566677777
Q ss_pred EcCC--------------CcEEEeecCCHHHHHHHHHHHHhC-CCCEEEEeCCceeeecCCcccccccccccCCcccccc
Q 007731 397 HGRQ--------------GREIFRRNLDRDFCREAYQYSWEH-KVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIP 461 (591)
Q Consensus 397 ~d~~--------------g~~i~~~~l~~e~v~eil~~l~~~-~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (591)
|+.. ++.++..+++.+.+.++++.+.+. +..+..+.... ...... +.. .. ..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---------~~~~~~-~~~--~~-~~ 139 (273)
T PRK00192 73 YIPKNYFPFQPDGERLKGDYWVIELGPPYEELREILDEISDELGYPLKGFGDLS---------AEEVAE-LTG--LS-GE 139 (273)
T ss_pred EecccccccCCccccccCCceEEEcCCCHHHHHHHHHHHHHHhCCCeeehhhCC---------HHHHHH-HhC--cC-HH
Confidence 7532 256788899999999998876553 43332221100 000000 000 00 00
Q ss_pred cHHHhhcccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCC-CcEEEE
Q 007731 462 AIEDLLATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVST-KEIMAI 540 (591)
Q Consensus 462 ~l~~~l~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~-eeviaf 540 (591)
.... .....+.+++++..+......+.+.+.. . .+.+..+ +.++||+|.+ +||.|++++++++|+++ +++++|
T Consensus 140 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~--~~~~~~~-~~~~ei~~~~-~Kg~al~~l~~~~~i~~~~~v~~~ 213 (273)
T PRK00192 140 SARL-AKDREFSEPFLWNGSEAAKERFEEALKR-L--GLKVTRG-GRFLHLLGGG-DKGKAVRWLKELYRRQDGVETIAL 213 (273)
T ss_pred HHHH-HHhcccCCceeecCchHHHHHHHHHHHH-c--CCEEEEC-CeEEEEeCCC-CHHHHHHHHHHHHhccCCceEEEE
Confidence 1111 1122344444423333444445555542 2 2555554 5799999999 99999999999999999 999999
Q ss_pred ecChhhHHHHHHCCceEEecCCcHHHH----hhc-ceec--CCCChHHHHHHHHHhh
Q 007731 541 GDGENDVEMLELASLGIALSNGSEKAK----AVA-NVIG--ASNDEDGVADAIYRYA 590 (591)
Q Consensus 541 GDs~NDi~Mlk~ag~gVAmgNA~~elk----~~A-d~Vt--~s~~edGVa~~L~~~~ 590 (591)
|||.||++|++.+|++|||+||.+++| +.| ++|+ .++.++||+++|++++
T Consensus 214 GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~ 270 (273)
T PRK00192 214 GDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKLL 270 (273)
T ss_pred cCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHHH
Confidence 999999999999999999999999999 666 6776 7888999999999864
No 18
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=100.00 E-value=8.3e-32 Score=273.59 Aligned_cols=241 Identities=17% Similarity=0.221 Sum_probs=176.0
Q ss_pred EEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEEcCC
Q 007731 321 YIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVHGRQ 400 (591)
Q Consensus 321 lI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~d~~ 400 (591)
+|++||||||+++++.+.+.++++|++++++|+.|+++|||++..+..+++.+++ .+ +.|+.||+.|++..
T Consensus 1 li~~DlDGTll~~~~~~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~--~~-------~~I~~NGa~i~~~~ 71 (256)
T TIGR01486 1 WIFTDLDGTLLDPHGYDWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGL--ED-------PFIVENGGAIYGPR 71 (256)
T ss_pred CEEEcCCCCCcCCCCcCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC--CC-------cEEEcCCeEEEeCC
Confidence 5899999999998874445799999999999999999999999999999999987 22 45666788888754
Q ss_pred CcE------EEeecCCHHHHHHHHHHHHh-CCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCee
Q 007731 401 GRE------IFRRNLDRDFCREAYQYSWE-HKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQ 473 (591)
Q Consensus 401 g~~------i~~~~l~~e~v~eil~~l~~-~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ 473 (591)
+.. ++...++.+.+.++++.+.+ .+..+..+... .+ .... .+... . .... +......+.
T Consensus 72 ~~~~~~~~~~~~~~i~~~~~~~il~~~~~~~~~~~~~~~~~-~~--------~~~~-~~~~~--~-~~~~-~~~~~~~~~ 137 (256)
T TIGR01486 72 GWFTEPEYPVIALGIPYEKIRARLEELSEELGFKFRGLGDL-TD--------AEIA-ELTGL--S-RELA-ALAQRREYS 137 (256)
T ss_pred CcccCCCeEEEEcCCCHHHHHHHHHHHHHHhCCCccchhhC-CH--------HHHH-HHhCc--C-HHHH-HHHhhCccC
Confidence 432 67888999999999986644 24433322210 00 0000 00000 0 0001 111122355
Q ss_pred EEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCC--CCcEEEEecChhhHHHHH
Q 007731 474 KLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVS--TKEIMAIGDGENDVEMLE 551 (591)
Q Consensus 474 ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~--~eeviafGDs~NDi~Mlk 551 (591)
++++. .. .....+.+.+.. ..+.+..++ .++||+|.+++||.|++++++++|++ .+++++||||.||++||+
T Consensus 138 ~~~~~-~~-~~~~~~~~~~~~---~~~~~~~s~-~~~ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~ 211 (256)
T TIGR01486 138 ETILW-SE-ERRERFTEALVE---LGLEVTHGN-RFYHVLGAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLE 211 (256)
T ss_pred Cceec-Ch-HHHHHHHHHHHH---cCCEEEeCC-ceEEEecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHH
Confidence 55555 32 333444454433 225555544 69999999999999999999999999 999999999999999999
Q ss_pred HCCceEEecCCc---HHHHhh--c-ceecCCCChHHHHHHHHHhh
Q 007731 552 LASLGIALSNGS---EKAKAV--A-NVIGASNDEDGVADAIYRYA 590 (591)
Q Consensus 552 ~ag~gVAmgNA~---~elk~~--A-d~Vt~s~~edGVa~~L~~~~ 590 (591)
.+|+||||+||. +++|+. | ++|+.+|+++||+++|++++
T Consensus 212 ~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~~~ 256 (256)
T TIGR01486 212 VVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEHLL 256 (256)
T ss_pred HCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHHhC
Confidence 999999999998 589987 5 59999999999999999874
No 19
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=100.00 E-value=2e-31 Score=263.71 Aligned_cols=215 Identities=24% Similarity=0.424 Sum_probs=155.2
Q ss_pred ceEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEEc
Q 007731 319 FRYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVHG 398 (591)
Q Consensus 319 iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~d 398 (591)
+|+|+|||||||+++++.+++.+.++|++++++|+.|+++|||++..+..+++.+++ +++.|+.||+.|++
T Consensus 1 ik~v~~DlDGTLl~~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~---------~~~~i~~NGa~i~~ 71 (215)
T TIGR01487 1 IKLVAIDIDGTLTEPNRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGT---------SGPVVAENGGVIFY 71 (215)
T ss_pred CcEEEEecCCCcCCCCcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCC---------CCcEEEccCcEEEe
Confidence 589999999999999999999999999999999999999999999999999998886 33566777888887
Q ss_pred CCCcEEEeecCCHHHHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCeeEEEEe
Q 007731 399 RQGREIFRRNLDRDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQKLIFL 478 (591)
Q Consensus 399 ~~g~~i~~~~l~~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki~~~ 478 (591)
..+. +........+... ...... . ... .....+ . . ....+.
T Consensus 72 ~~~~-~~~~~~~~~~~~~---~~~~~~--~------------~~~---~~~~~~---------------~-~--~~~~~~ 112 (215)
T TIGR01487 72 NKED-IFLANMEEEWFLD---EEKKKR--F------------PRD---RLSNEY---------------P-R--ASLVIM 112 (215)
T ss_pred CCCc-EEEecccchhhHH---Hhhhhh--h------------hhh---hccccc---------------c-e--eEEEEe
Confidence 5443 3222211111100 000000 0 000 000000 0 0 111111
Q ss_pred cChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEE
Q 007731 479 DTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIA 558 (591)
Q Consensus 479 ~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVA 558 (591)
..... ...+.+.+.. ..+.++.+ ..++||++.+++||.+++++++++|++.+++++||||.||++|++.+|+|||
T Consensus 113 ~~~~~-~~~~~~~l~~---~~~~~~~~-~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~va 187 (215)
T TIGR01487 113 REGKD-VDEVREIIKE---RGLNLVDS-GFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVA 187 (215)
T ss_pred cCCcc-HHHHHHHHHh---CCeEEEec-CceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEE
Confidence 11111 2233444432 23455544 4689999999999999999999999999999999999999999999999999
Q ss_pred ecCCcHHHHhhcceecCCCChHHHHHHH
Q 007731 559 LSNGSEKAKAVANVIGASNDEDGVADAI 586 (591)
Q Consensus 559 mgNA~~elk~~Ad~Vt~s~~edGVa~~L 586 (591)
|+|+.+++|+.|++|+.+++++||+++|
T Consensus 188 m~na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 188 VANADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred cCCccHHHHHhCCEEcCCCCCchhhhhC
Confidence 9999999999999999999999999875
No 20
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.97 E-value=2.7e-30 Score=261.42 Aligned_cols=233 Identities=21% Similarity=0.329 Sum_probs=163.8
Q ss_pred eEEEEecCCCccC---CCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEE
Q 007731 320 RYIFCDMDGTLLN---SQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLV 396 (591)
Q Consensus 320 KlI~fDLDGTLld---~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I 396 (591)
.+|++||||||++ .+..+++++.++++++.++|+.|++||||++..+..+.+.+++..++.+|++| |+.|
T Consensus 2 ~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~N-------Ga~I 74 (249)
T TIGR01485 2 LLLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSV-------GSEI 74 (249)
T ss_pred eEEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcC-------CceE
Confidence 3799999999997 66778999999999999999999999999999999999888876655566665 5555
Q ss_pred EcCCCcEEEeecCCHHHHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCeeEEE
Q 007731 397 HGRQGREIFRRNLDRDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQKLI 476 (591)
Q Consensus 397 ~d~~g~~i~~~~l~~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki~ 476 (591)
+.. +.. .+...+...+...+.. +. .......+.. ..... . ....+.|+.
T Consensus 75 ~~~-~~~-----~~~~~~~~~~~~~~~~---------~~---------~~~~~~~~~~--l~~~~----~-~~~~~~k~~ 123 (249)
T TIGR01485 75 YYG-GAE-----VPDQHWAEYLSEKWQR---------DI---------VVAITDKFEE--LKPQP----D-LEQRPHKVS 123 (249)
T ss_pred EeC-CCC-----cCCHHHHHHHhcccCH---------HH---------HHHHHhcCcc--cccCC----c-cccCCeeEE
Confidence 532 111 1111111111110000 00 0000000000 00000 0 023456666
Q ss_pred EecChhh---HHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHH-
Q 007731 477 FLDTAEG---VATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLEL- 552 (591)
Q Consensus 477 ~~~~~~~---~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~- 552 (591)
+...+.. ....+.+.+.. .+..+.++.++..++||+|++++|+.|++++++++|+++++|++|||+.||++||+.
T Consensus 124 ~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~ 202 (249)
T TIGR01485 124 FFLDPEAAPEVIKQLTEMLKE-TGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIG 202 (249)
T ss_pred EEechhhhhHHHHHHHHHHHh-cCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHcc
Confidence 6554433 22333444433 344567778888999999999999999999999999999999999999999999998
Q ss_pred CCceEEecCCcHHHHhhcc-------eecCCCChHHHHHHHHHhhC
Q 007731 553 ASLGIALSNGSEKAKAVAN-------VIGASNDEDGVADAIYRYAF 591 (591)
Q Consensus 553 ag~gVAmgNA~~elk~~Ad-------~Vt~s~~edGVa~~L~~~~f 591 (591)
++.+|+|+||.+++|+.++ +++.....+||+++|+++.|
T Consensus 203 ~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~~~~ 248 (249)
T TIGR01485 203 SVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIAHFDL 248 (249)
T ss_pred CCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHHcCC
Confidence 6799999999999998654 78888999999999999865
No 21
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.97 E-value=3.1e-30 Score=258.87 Aligned_cols=230 Identities=22% Similarity=0.295 Sum_probs=159.5
Q ss_pred EEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEEcCC
Q 007731 321 YIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVHGRQ 400 (591)
Q Consensus 321 lI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~d~~ 400 (591)
+|++||||||++++..+++.+ ++++ ++++|+.|+++|||++..+..++..+++..++.+|++| |+.|+...
T Consensus 1 li~~DlDgTLl~~~~~~~~~~-~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~n-------Ga~i~~~~ 71 (236)
T TIGR02471 1 LIITDLDNTLLGDDEGLASFV-ELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARV-------GTEIYYGP 71 (236)
T ss_pred CeEEeccccccCCHHHHHHHH-HHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECC-------CceEEeCC
Confidence 589999999999888888877 7776 68889999999999999999999999875555566655 66655322
Q ss_pred CcEEEeecCCHHHHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCeeEEEEecC
Q 007731 401 GREIFRRNLDRDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQKLIFLDT 480 (591)
Q Consensus 401 g~~i~~~~l~~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki~~~~~ 480 (591)
.. ..+..+... +.+ .... .. ....... .+... +... ....+.++.+...
T Consensus 72 ~~-----~~~~~~~~~----~~~-~~~~-------------~~-~~~~~~~--~~~~~----~~~~-~~~~~~~i~~~~~ 120 (236)
T TIGR02471 72 EL-----QPDRFWQKH----IDH-DWRR-------------QA-VVEALAD--IPGLT----LQDD-QEQGPFKISYLLD 120 (236)
T ss_pred CC-----CCChhHHHH----Hhc-CCCH-------------HH-HHHHHhc--CCCcE----eCCh-hcCCCeeEEEEEC
Confidence 10 001111000 000 0000 00 0000000 00000 0000 0123455555544
Q ss_pred hh--hHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEE
Q 007731 481 AE--GVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIA 558 (591)
Q Consensus 481 ~~--~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVA 558 (591)
+. .....+.+.+... +..+.++.++..++|++|+++||+.|++++++++|++++++++||||.||++||+.+|+||+
T Consensus 121 ~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~ia 199 (236)
T TIGR02471 121 PEGEPILPQIRQRLRQQ-SQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVV 199 (236)
T ss_pred cccchHHHHHHHHHHhc-cCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEE
Confidence 32 1223344444443 33456677788899999999999999999999999999999999999999999999999999
Q ss_pred ecCCcHHHHhhcc----eecCCCChHHHHHHHHHhhC
Q 007731 559 LSNGSEKAKAVAN----VIGASNDEDGVADAIYRYAF 591 (591)
Q Consensus 559 mgNA~~elk~~Ad----~Vt~s~~edGVa~~L~~~~f 591 (591)
|+|+.+++|+.|+ +|+.+|+++||+++|+++-|
T Consensus 200 v~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~~~~ 236 (236)
T TIGR02471 200 VGNHDPELEGLRHQQRIYFANNPHAFGILEGINHYDF 236 (236)
T ss_pred EcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHhhCC
Confidence 9999999999999 89999999999999999865
No 22
>PLN02382 probable sucrose-phosphatase
Probab=99.96 E-value=5e-29 Score=268.66 Aligned_cols=237 Identities=19% Similarity=0.276 Sum_probs=163.9
Q ss_pred CCCceEEEEecCCCccCCC--CCCCHHHHHHH-HHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEec
Q 007731 316 KPKFRYIFCDMDGTLLNSQ--SKISLTTAKAL-KEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQ 392 (591)
Q Consensus 316 ~~~iKlI~fDLDGTLld~~--~~is~~~~eaL-~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~N 392 (591)
.+..-+|++||||||++++ ..++....+++ +++.++|+.|+++|||++..+..+.+.+++..++.+|+.||+.|+++
T Consensus 6 ~~~~~lI~sDLDGTLL~~~~~~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~ 85 (413)
T PLN02382 6 GSPRLMIVSDLDHTMVDHHDPENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYG 85 (413)
T ss_pred CCCCEEEEEcCCCcCcCCCCccchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeC
Confidence 3344689999999999873 47887677766 88889999999999999999999999888876666666665444433
Q ss_pred CEEEEcCCCcEEEeecCCHHHHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCe
Q 007731 393 GLLVHGRQGREIFRRNLDRDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDI 472 (591)
Q Consensus 393 GA~I~d~~g~~i~~~~l~~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i 472 (591)
+..+ +...+...++..+.. ....+.. ..+... . +.. .....+
T Consensus 86 ~~~~-------------~d~~w~~~l~~~w~~-----------------~~v~~~~-~~~~~l--~----~q~-~~~~~~ 127 (413)
T PLN02382 86 ESMV-------------PDHGWVEYLNKKWDR-----------------EIVVEET-SKFPEL--K----LQP-ETEQRP 127 (413)
T ss_pred CCCc-------------cChhHHHHHhccCCh-----------------hhHHHHH-hcCCCc--c----cCC-cccCCC
Confidence 2111 112222222211100 0000000 000000 0 000 012456
Q ss_pred eEEEEecChhhHHHhHHHHHHHhc---cCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHc---CCCCCcEEEEecChhh
Q 007731 473 QKLIFLDTAEGVATTIRPYWSEAT---KDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHL---GVSTKEIMAIGDGEND 546 (591)
Q Consensus 473 ~ki~~~~~~~~~~~~l~~~l~~~~---~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~l---gI~~eeviafGDs~ND 546 (591)
.|+.++.++... ..+.+.+.+.+ +..+.++.++..++||+|+++|||.||++|++++ |++++++++||||.||
T Consensus 128 ~Ki~~~~~~~~~-~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~ND 206 (413)
T PLN02382 128 HKVSFYVDKKKA-QEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGND 206 (413)
T ss_pred eEEEEEechHHh-HHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHH
Confidence 777777655432 23344444444 3346777888899999999999999999999999 9999999999999999
Q ss_pred HHHHHHCC-ceEEecCCcHHHHhhc--------cee-cCCCChHHHHHHHHHhhC
Q 007731 547 VEMLELAS-LGIALSNGSEKAKAVA--------NVI-GASNDEDGVADAIYRYAF 591 (591)
Q Consensus 547 i~Mlk~ag-~gVAmgNA~~elk~~A--------d~V-t~s~~edGVa~~L~~~~f 591 (591)
++||+.+| +||+|+||.+++|+.+ +++ +.++.++||+++|++|.|
T Consensus 207 leMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~f~l 261 (413)
T PLN02382 207 AELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGHFNL 261 (413)
T ss_pred HHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHHhCC
Confidence 99999999 7999999999999864 333 356789999999999864
No 23
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.96 E-value=4.6e-27 Score=259.89 Aligned_cols=290 Identities=15% Similarity=0.115 Sum_probs=195.2
Q ss_pred cccccccchHHHHhhchhhh-----------ccccccccCCCceEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEE
Q 007731 288 SAYDSETNTNIQVENSDDRK-----------QEGSLRFYKPKFRYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVV 356 (591)
Q Consensus 288 ~a~d~~~~~~~~l~~~~~~~-----------~~~~l~~~~~~iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vv 356 (591)
...|.++|.+..-+..++.- ....+++..++.|+|++||||||+++++.+++.++++|++++++|+.|+
T Consensus 374 ~~~d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KLIfsDLDGTLLd~d~~i~~~t~eAL~~L~ekGI~~V 453 (694)
T PRK14502 374 QKMDLPKFSAIIEKYLPQMVLPDGELISRAARPSRLPSSGQFKKIVYTDLDGTLLNPLTYSYSTALDALRLLKDKELPLV 453 (694)
T ss_pred ccCCHHHHHHHHHHhchheeCCCCCccchhhhcccCCCcCceeeEEEEECcCCCcCCCCccCHHHHHHHHHHHHcCCeEE
Confidence 35677766663322332221 2233466677889999999999999888888999999999999999999
Q ss_pred EEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEE-------cCCCcEEEeecCCHHHHHHHHHHHHhCCCCEE
Q 007731 357 VATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVH-------GRQGREIFRRNLDRDFCREAYQYSWEHKVPLI 429 (591)
Q Consensus 357 iaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~-------d~~g~~i~~~~l~~e~v~eil~~l~~~~i~~~ 429 (591)
+||||+...+..+++.+++ .+++|++||..|+.+..... ..++..++...++.+.++++++.+.+ .....
T Consensus 454 IATGRs~~~i~~l~~~Lgl--~~~~I~eNGA~I~~~~~~~~~~~~~~~~~~~~iI~~~~l~~e~i~~IL~~lke-~l~~~ 530 (694)
T PRK14502 454 FCSAKTMGEQDLYRNELGI--KDPFITENGGAIFIPKDYFRLPFAYDRVAGNYLVIELGMAYKDIRHILKKALA-EACTE 530 (694)
T ss_pred EEeCCCHHHHHHHHHHcCC--CCeEEEcCCCEEEECCCcccccccccccCCCeEEEEcCCCHHHHHHHHHHHHH-hhcce
Confidence 9999999999999999887 34566665444443221000 01234688889999999999998877 44333
Q ss_pred EE---eCCceeeecCCcc-cccccccccCCcccccccHHHhhcccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEe
Q 007731 430 AF---SGDRCLTLFDHPL-VDSLHTTYHEPKAEIIPAIEDLLATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQA 505 (591)
Q Consensus 430 i~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s 505 (591)
++ ..++.++...... ........ ... ..............++++..+++ ..+.+.+.+... .+++..
T Consensus 531 i~ihv~~~~~~i~~~~d~~~~ei~~~T---gL~-~~~a~~a~~Re~seKIl~~gd~e-~Leel~~~L~~~---~l~v~~- 601 (694)
T PRK14502 531 IENSEKAGNIFITSFGDMSVEDVSRLT---DLN-LKQAELAKQREYSETVHIEGDKR-STNIVLNHIQQS---GLEYSF- 601 (694)
T ss_pred eeeeeccCcEEEecCCcccHHHHHHhh---CCC-HHHHHHHhhccCceeEEEcCCHH-HHHHHHHHHHHc---CcEEEE-
Confidence 33 3333332211111 11111110 000 11222222233456777766554 345566666543 355555
Q ss_pred cCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEE--ecChhhHHHHHHCCceEEecCCcH---HHHhhcceecCCCChH
Q 007731 506 IPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAI--GDGENDVEMLELASLGIALSNGSE---KAKAVANVIGASNDED 580 (591)
Q Consensus 506 ~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviaf--GDs~NDi~Mlk~ag~gVAmgNA~~---elk~~Ad~Vt~s~~ed 580 (591)
++.++||+ .++|||.|+++|++.+|++.+++++| |||.||++||+.||+||||++... .++..-...+....-.
T Consensus 602 g~rfleI~-~gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~~~~~~~l~~~~~~~~~~~GP~ 680 (694)
T PRK14502 602 GGRFYEVT-GGNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRPGNKWHKMRLRNPSYVKGVGPE 680 (694)
T ss_pred CCEEEEeC-CCCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCCCCCCCccCCCCceecCCCCcH
Confidence 77899999 59999999999999999999999999 999999999999999999987543 3421112345666778
Q ss_pred HHHHHHHHhh
Q 007731 581 GVADAIYRYA 590 (591)
Q Consensus 581 GVa~~L~~~~ 590 (591)
|+.++|.+++
T Consensus 681 GW~eai~~~L 690 (694)
T PRK14502 681 GFSRAVTDII 690 (694)
T ss_pred HHHHHHHHHH
Confidence 9999998875
No 24
>PTZ00174 phosphomannomutase; Provisional
Probab=99.96 E-value=5.2e-28 Score=244.60 Aligned_cols=233 Identities=18% Similarity=0.221 Sum_probs=155.6
Q ss_pred CCCceEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEE
Q 007731 316 KPKFRYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLL 395 (591)
Q Consensus 316 ~~~iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~ 395 (591)
.|++|+|+|||||||+++++.+++.++++|++++++|++|++||||++..+...++....... .+.|++||+.
T Consensus 2 ~~~~klia~DlDGTLL~~~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~-------~~~I~~NGa~ 74 (247)
T PTZ00174 2 EMKKTILLFDVDGTLTKPRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLGEDVLEDF-------DYVFSENGLV 74 (247)
T ss_pred CCCCeEEEEECcCCCcCCCCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhhhhhccc-------CeEEeCCceE
Confidence 367899999999999999999999999999999999999999999999988777653321111 1346678999
Q ss_pred EEcCCCcEEEeec----CCHHHHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccC
Q 007731 396 VHGRQGREIFRRN----LDRDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVD 471 (591)
Q Consensus 396 I~d~~g~~i~~~~----l~~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 471 (591)
|++ .++.++... ++.+.+.++++.+.+....+.++.....|........ ... +......... ...
T Consensus 75 I~~-~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~----~~~ 143 (247)
T PTZ00174 75 AYK-DGELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMI-NIS-----PIGRNCSQEE----RDE 143 (247)
T ss_pred EEE-CCeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceE-Eec-----cccccCCHHH----HHH
Confidence 986 567788776 5678999999887654222222222222222111000 000 0000000000 001
Q ss_pred eeEEEEecChhhHHHhHHHHHHHhccCCeEEEEe--cCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEec----Chh
Q 007731 472 IQKLIFLDTAEGVATTIRPYWSEATKDRANVVQA--IPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGD----GEN 545 (591)
Q Consensus 472 i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s--~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGD----s~N 545 (591)
+.+ ..........+.+.+...+.. +.+..+ ++.++||+|+++|||.||++|+++ .+++++||| +.|
T Consensus 144 ~~~---~~~~~~~~~~~~~~l~~~~~~-~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~----~~eviafGD~~~~~~N 215 (247)
T PTZ00174 144 FEK---YDKEHHIREKFIQDLKKEFSD-LGLKFSIGGQISFDVFPKGWDKTYCLRHLEND----FKEIHFFGDKTFEGGN 215 (247)
T ss_pred HHh---cCCcchHHHHHHHHHHHhcCC-CCeEEEecCceEEEeeeCCCcHHHHHHHHHhh----hhhEEEEcccCCCCCC
Confidence 111 122122223455566555532 333333 357999999999999999999998 489999999 899
Q ss_pred hHHHHHHCC-ceEEecCCcHHHHhhcceec
Q 007731 546 DVEMLELAS-LGIALSNGSEKAKAVANVIG 574 (591)
Q Consensus 546 Di~Mlk~ag-~gVAmgNA~~elk~~Ad~Vt 574 (591)
|++||+.++ .|++|+|+.+.+|..+..+.
T Consensus 216 DieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 216 DYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred cHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 999999874 57888899999999876543
No 25
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.95 E-value=3e-26 Score=227.46 Aligned_cols=214 Identities=21% Similarity=0.281 Sum_probs=148.2
Q ss_pred EEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEEcCC
Q 007731 321 YIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVHGRQ 400 (591)
Q Consensus 321 lI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~d~~ 400 (591)
+|++||||||+++++.+++.++++|++++++|++|+++|||+...+..+++.+++.. .+.|+.||+.|++..
T Consensus 1 ~i~~DlDGTLL~~~~~~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~--------~~~I~~NGa~i~~~~ 72 (221)
T TIGR02463 1 WVFSDLDGTLLDSHSYDWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTG--------DPYIAENGAAIHLEE 72 (221)
T ss_pred CEEEeCCCCCcCCCCCCcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC--------CcEEEeCCcEEEcCc
Confidence 489999999999887677779999999999999999999999999999999988721 245677789998743
Q ss_pred C-cE-----EEeecCCHHHHHHHHHHHHhC-CCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCee
Q 007731 401 G-RE-----IFRRNLDRDFCREAYQYSWEH-KVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQ 473 (591)
Q Consensus 401 g-~~-----i~~~~l~~e~v~eil~~l~~~-~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ 473 (591)
+ +. .+...++.+.+.++++.+.+. ...+..+ +..+.. .... +. ... ..... ........
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~-------~~~~-~~--~~~-~~~~~-~~~~~~~~ 138 (221)
T TIGR02463 73 LWREEPGYPRIILGISYGIIRLVLETLSEELHFKFTPF--DDLSDA-------EIAE-LT--GLS-GSQAA-LAQDREAS 138 (221)
T ss_pred ccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceeh--hhCCHH-------HHHH-Hh--CcC-HHHHH-HHHhccCC
Confidence 3 32 355678889999999876553 3322222 111000 0000 00 000 00111 11112233
Q ss_pred EEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHC
Q 007731 474 KLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELA 553 (591)
Q Consensus 474 ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~a 553 (591)
++++...+......+.+.+.. . .+.+..+ ..++||+|.+++||.|++++++++|+++++|++||||.||++||+.+
T Consensus 139 ~~~~~~~~~~~~~~~~~~l~~-~--~~~~~~~-~~~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~a 214 (221)
T TIGR02463 139 VPLLWRDSDSRMPRFTALLAD-L--GLAIVQG-NRFSHVLGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVA 214 (221)
T ss_pred ccEEecCchhHHHHHHHHHHH-c--CCeEEec-CCeeEEecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhC
Confidence 444441233334445555543 2 2555554 67899999999999999999999999999999999999999999999
Q ss_pred CceEEec
Q 007731 554 SLGIALS 560 (591)
Q Consensus 554 g~gVAmg 560 (591)
|+|||+.
T Consensus 215 g~~va~~ 221 (221)
T TIGR02463 215 DYAVVIK 221 (221)
T ss_pred CceEEeC
Confidence 9999973
No 26
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.93 E-value=1.3e-24 Score=221.91 Aligned_cols=216 Identities=15% Similarity=0.150 Sum_probs=155.2
Q ss_pred eEEEEecCCCccCC-----CCCCCHHHHHHHHHHHh-cCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecC
Q 007731 320 RYIFCDMDGTLLNS-----QSKISLTTAKALKEALS-RGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQG 393 (591)
Q Consensus 320 KlI~fDLDGTLld~-----~~~is~~~~eaL~~L~~-~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NG 393 (591)
.+|+||+||||++. +..++++++++|++|.+ .|+.|+++|||+...+..+++.+++ . .++.||
T Consensus 15 ~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~----~-------~i~~nG 83 (266)
T PRK10187 15 YAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRF----P-------LAGVHG 83 (266)
T ss_pred EEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccc----e-------EEEeCC
Confidence 69999999999984 56899999999999998 7999999999999999988876543 2 345568
Q ss_pred EEEEcCCCcEEEeecCCHHHHHHHHHHHHhCC--C-CEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhccc
Q 007731 394 LLVHGRQGREIFRRNLDRDFCREAYQYSWEHK--V-PLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATV 470 (591)
Q Consensus 394 A~I~d~~g~~i~~~~l~~e~v~eil~~l~~~~--i-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 470 (591)
+.+++.++.. +...++.+.+.++.+.+++.- . ...++..+..+.. ++ .. . .
T Consensus 84 a~i~~~~~~~-~~~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~---------h~--r~----~-~--------- 137 (266)
T PRK10187 84 AERRDINGKT-HIVHLPDAIARDISVQLHTALAQLPGAELEAKGMAFAL---------HY--RQ----A-P--------- 137 (266)
T ss_pred CeeecCCCCe-eeccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEE---------EC--CC----C-C---------
Confidence 8887655543 345678888888877765531 1 2233333333321 11 00 0 0
Q ss_pred CeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHH
Q 007731 471 DIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEML 550 (591)
Q Consensus 471 ~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Ml 550 (591)
........+.+.+.+.++ ...+.+++.++||.|.++|||.|++++++++|++.+++++|||+.||++||
T Consensus 138 ---------~~~~~~~~l~~~i~~~~~--~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf 206 (266)
T PRK10187 138 ---------QHEDALLALAQRITQIWP--QLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGF 206 (266)
T ss_pred ---------ccHHHHHHHHHHHHhhCC--ceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHH
Confidence 011112223333333332 233457889999999999999999999999999999999999999999999
Q ss_pred HHC----CceEEecCCcHHHHhhcceecCCCChHHHHHHHHHh
Q 007731 551 ELA----SLGIALSNGSEKAKAVANVIGASNDEDGVADAIYRY 589 (591)
Q Consensus 551 k~a----g~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~~~ 589 (591)
+.+ |++|+|||+.+. |.+...+ -++|..+|..+
T Consensus 207 ~~~~~~~g~~vavg~a~~~----A~~~l~~--~~~v~~~L~~l 243 (266)
T PRK10187 207 AVVNRLGGISVKVGTGATQ----ASWRLAG--VPDVWSWLEMI 243 (266)
T ss_pred HHHHhcCCeEEEECCCCCc----CeEeCCC--HHHHHHHHHHH
Confidence 999 999999998643 6676654 45688888765
No 27
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.93 E-value=1.2e-24 Score=216.91 Aligned_cols=209 Identities=22% Similarity=0.248 Sum_probs=146.5
Q ss_pred EEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEEcCC
Q 007731 321 YIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVHGRQ 400 (591)
Q Consensus 321 lI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~d~~ 400 (591)
+|+|||||||+++ +.++++++++|++++++|+.++++|||+...+..+++.+++ .+ +.|+.||+.|++..
T Consensus 1 li~~DlDGTLl~~-~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~--~~-------~~I~~NGa~I~~~~ 70 (225)
T TIGR02461 1 VIFTDLDGTLLPP-GYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGV--EP-------PFIVENGGAIFIPR 70 (225)
T ss_pred CEEEeCCCCCcCC-CCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC--CC-------cEEEcCCcEEEecC
Confidence 5899999999995 45667899999999999999999999999999999999987 22 34556677777632
Q ss_pred --------------CcEEEeecCCHHHHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHh
Q 007731 401 --------------GREIFRRNLDRDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDL 466 (591)
Q Consensus 401 --------------g~~i~~~~l~~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 466 (591)
++.++...++.+.++++++.+.+ ...+..++. .. .. .... +... ......+
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~il~~~~~-~~~~~~~~~--~~----~~---~~~~-~~~~----~~~~~~~ 135 (225)
T TIGR02461 71 GYFPFPVGAGREVGNYEVIELGKPVAKIRAALKEAEN-EYGLKYYGN--ST----AE---EVEK-LTGL----PRELAPL 135 (225)
T ss_pred ccccccccccccCCCeEEEEcCCCHHHHHHHHHHHHH-hcCccchhc--CC----HH---HHHH-HHCc----CHHHHHH
Confidence 45688999999999999998887 222322221 00 00 0000 0000 0011111
Q ss_pred hcccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCC--CCCcEEEEecCh
Q 007731 467 LATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGV--STKEIMAIGDGE 544 (591)
Q Consensus 467 l~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI--~~eeviafGDs~ 544 (591)
.....+.|+++..+++. ...+.+.+. ...+.++.++. ++++ +.++||+.|++.+++.+++ +..++++|||+.
T Consensus 136 ~~~~~~~ki~~~~~~e~-~~~~~~~~~---~~~~~~~~s~~-~~~i-~~~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~ 209 (225)
T TIGR02461 136 AKRREYSETIFLWSREG-WEAILVTAR---ARGLKYTHGGR-FYTV-HGGSDKGKAIKRLLDLYKLRPGAIESVGLGDSE 209 (225)
T ss_pred HHhhhcCCcccCCCHHH-HHHHHHHHH---HcCCcEEECCE-EEEE-CCCCCHHHHHHHHHHHhccccCcccEEEEcCCH
Confidence 12234556666655443 334444443 23466677654 4665 5599999999999999977 666899999999
Q ss_pred hhHHHHHHCCceEEec
Q 007731 545 NDVEMLELASLGIALS 560 (591)
Q Consensus 545 NDi~Mlk~ag~gVAmg 560 (591)
||++||+.+|+||++|
T Consensus 210 nD~~ml~~ag~~v~v~ 225 (225)
T TIGR02461 210 NDFPMFEVVDLAFLVG 225 (225)
T ss_pred HHHHHHHhCCCcEecC
Confidence 9999999999999986
No 28
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.92 E-value=2.2e-25 Score=225.30 Aligned_cols=231 Identities=20% Similarity=0.327 Sum_probs=141.5
Q ss_pred eEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEe--cCEEEE
Q 007731 320 RYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFI--QGLLVH 397 (591)
Q Consensus 320 KlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~--NGA~I~ 397 (591)
++|++||||||++.+..-..+..+.++...+.++.|+++|||+...+.+++...+++.++.+|+++|..|+. ++....
T Consensus 3 ~ll~sDlD~Tl~~~~~~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~~~~d~ 82 (247)
T PF05116_consen 3 RLLASDLDGTLIDGDDEALARLEELLEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGENWQPDE 82 (247)
T ss_dssp EEEEEETBTTTBHCHHHHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESSTTEE-H
T ss_pred EEEEEECCCCCcCCCHHHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCCCcChH
Confidence 689999999999332222333334443233457999999999999999999999988899999998766665 211110
Q ss_pred cCCCcEEEeecCCHHHHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCeeEEEE
Q 007731 398 GRQGREIFRRNLDRDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQKLIF 477 (591)
Q Consensus 398 d~~g~~i~~~~l~~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki~~ 477 (591)
.........++.+.+.+++..+.. +. .... . ...-.|+.+
T Consensus 83 --~w~~~i~~~w~~~~v~~~l~~~~~----l~-~q~~---------~------------------------~q~~~k~sy 122 (247)
T PF05116_consen 83 --EWQAHIDERWDRERVEEILAELPG----LR-PQPE---------S------------------------EQRPFKISY 122 (247)
T ss_dssp --HHHHHHHTT--HHHHHHHHHCHCC----EE-EGGC---------C------------------------CGCCTCECE
T ss_pred --HHHHHHHhcCChHHHHHHHHHhhC----cc-cCCc---------c------------------------ccCCeeEEE
Confidence 000111112333333333322211 10 0000 0 000011111
Q ss_pred ecCh---hhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCC
Q 007731 478 LDTA---EGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELAS 554 (591)
Q Consensus 478 ~~~~---~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag 554 (591)
+... ......+.+.+.. .+-.++++.++...++|+|.+++|+.||+++++++++++++++++|||.||++||..+.
T Consensus 123 ~~~~~~~~~~~~~i~~~l~~-~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~ 201 (247)
T PF05116_consen 123 YVDPDDSADILEEIRARLRQ-RGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGD 201 (247)
T ss_dssp EEETTSHCHHHHHHHHHHHC-CTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSS
T ss_pred EEecccchhHHHHHHHHHHH-cCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcC
Confidence 1111 1223345554432 33446778888899999999999999999999999999999999999999999998888
Q ss_pred ceEEecCCcHH-----HHhhcc----eecCCCChHHHHHHHHHhhC
Q 007731 555 LGIALSNGSEK-----AKAVAN----VIGASNDEDGVADAIYRYAF 591 (591)
Q Consensus 555 ~gVAmgNA~~e-----lk~~Ad----~Vt~s~~edGVa~~L~~~~f 591 (591)
.||+|+|+.++ ..+... |++..+...||.++|++|.|
T Consensus 202 ~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~~~~~ 247 (247)
T PF05116_consen 202 HGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQHFGF 247 (247)
T ss_dssp EEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHHHTTT
T ss_pred CEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHHHcCC
Confidence 99999999999 332221 67788999999999999976
No 29
>PLN02423 phosphomannomutase
Probab=99.91 E-value=2.4e-23 Score=210.22 Aligned_cols=222 Identities=18% Similarity=0.192 Sum_probs=142.7
Q ss_pred ce-EEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEE
Q 007731 319 FR-YIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVH 397 (591)
Q Consensus 319 iK-lI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~ 397 (591)
+| +++|||||||+++++.+++++.++|++++++ +.|++||||+...+...+.......... .|+.||+.++
T Consensus 6 ~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l~~~-i~fviaTGR~~~~~~~~~~~~~~~~~~~-------~I~~NGa~i~ 77 (245)
T PLN02423 6 PGVIALFDVDGTLTAPRKEATPEMLEFMKELRKV-VTVGVVGGSDLSKISEQLGKTVINDYDY-------VFSENGLVAH 77 (245)
T ss_pred cceEEEEeccCCCcCCCCcCCHHHHHHHHHHHhC-CEEEEECCcCHHHHHHHhcccccccCCE-------EEECCceEEE
Confidence 45 5559999999999999999999999999976 9999999998887776665431100013 3455677777
Q ss_pred cCCCcEEEe----ecCCHHHHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCee
Q 007731 398 GRQGREIFR----RNLDRDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQ 473 (591)
Q Consensus 398 d~~g~~i~~----~~l~~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ 473 (591)
.+|+.++. ..++.+.+.++++.+++......++.....+..+.... ....+....... .. .+++.
T Consensus 78 -~~g~~i~~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i---~~~~~~~~~~~~----~~---~~~~~ 146 (245)
T PLN02423 78 -KDGKLIGTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGM---LNVSPIGRNCSQ----EE---RDEFE 146 (245)
T ss_pred -eCCEEEEEecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCc---cccCcccccCCH----hH---HhhHH
Confidence 46677766 55778999999998876433233333322232211100 000000000000 00 01111
Q ss_pred EEEEecChhhHHHhHHHHHHHhccC-CeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEec----ChhhHH
Q 007731 474 KLIFLDTAEGVATTIRPYWSEATKD-RANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGD----GENDVE 548 (591)
Q Consensus 474 ki~~~~~~~~~~~~l~~~l~~~~~~-~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGD----s~NDi~ 548 (591)
++..+. . ....+...+.+.+++ .+..+.++..++||+++|+|||.||+.|+ ++++|+|||| +.||++
T Consensus 147 ~i~~i~--~-~~~~~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~e 218 (245)
T PLN02423 147 KYDKVH--N-IRPKMVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHE 218 (245)
T ss_pred hhCccc--h-HHHHHHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHH
Confidence 221121 2 223455666666654 23444555579999999999999999998 7899999999 899999
Q ss_pred HHHHCC-ceEEecCCcHHHH
Q 007731 549 MLELAS-LGIALSNGSEKAK 567 (591)
Q Consensus 549 Mlk~ag-~gVAmgNA~~elk 567 (591)
|++..| .+++|.+..+.+.
T Consensus 219 Ml~~~~~~~~~~~~~~~~~~ 238 (245)
T PLN02423 219 IFESERTIGHTVTSPDDTRE 238 (245)
T ss_pred HHhCCCcceEEeCCHHHHHH
Confidence 999855 5999977555443
No 30
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.91 E-value=1.1e-22 Score=199.35 Aligned_cols=199 Identities=27% Similarity=0.420 Sum_probs=131.0
Q ss_pred EEEEecCCCccCCC-CCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEEcC
Q 007731 321 YIFCDMDGTLLNSQ-SKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVHGR 399 (591)
Q Consensus 321 lI~fDLDGTLld~~-~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~d~ 399 (591)
+|+||+||||++++ ..+++++.++|++|.++|+.++++|||+...+..+++.++ ..+|++| |+.+++
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~----~~~i~~n-------Ga~i~~- 68 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP----LPLIAEN-------GALIFY- 68 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC----CCEEECC-------CcEEEE-
Confidence 58999999999987 7899999999999999999999999999999999988743 3566665 566654
Q ss_pred CCcEEEeecCCHHHHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCeeEEEEec
Q 007731 400 QGREIFRRNLDRDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQKLIFLD 479 (591)
Q Consensus 400 ~g~~i~~~~l~~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki~~~~ 479 (591)
.++.++.. +.+.+..++....+....+..+. .++. ....+... ..+ .+....
T Consensus 69 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~e~~~--------------------~~~-~~~~~~ 120 (204)
T TIGR01484 69 PGEILYIE--PSDVFEEILGIKEEIGAELKSLS--EHYV---GTFIEDKA--------------------IAV-AIHYVG 120 (204)
T ss_pred CCEEEEEc--ccccHHHHHHhhhhcCceeeeec--cccc---cceeeccc--------------------cee-eEEEec
Confidence 23334443 33445555544422221111111 1110 00000000 000 000000
Q ss_pred --ChhhHHHhHHHHHHHhc--cCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCc
Q 007731 480 --TAEGVATTIRPYWSEAT--KDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASL 555 (591)
Q Consensus 480 --~~~~~~~~l~~~l~~~~--~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~ 555 (591)
........+...+.... ...+.++.++..++||+|++++|+.+++.++++++++++++++|||+.||++|++.+|+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~ 200 (204)
T TIGR01484 121 AELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGL 200 (204)
T ss_pred cchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCC
Confidence 01111122233333221 13366666788999999999999999999999999999999999999999999999999
Q ss_pred eEEe
Q 007731 556 GIAL 559 (591)
Q Consensus 556 gVAm 559 (591)
+|||
T Consensus 201 ~vam 204 (204)
T TIGR01484 201 AVAV 204 (204)
T ss_pred ceEC
Confidence 9998
No 31
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.90 E-value=2.7e-22 Score=231.79 Aligned_cols=250 Identities=18% Similarity=0.245 Sum_probs=164.3
Q ss_pred ccccccchHHHHhhchhhhcccc---------c-------cccCCCceEEEEecCCCccCC-----CCCCCHHHHHHHHH
Q 007731 289 AYDSETNTNIQVENSDDRKQEGS---------L-------RFYKPKFRYIFCDMDGTLLNS-----QSKISLTTAKALKE 347 (591)
Q Consensus 289 a~d~~~~~~~~l~~~~~~~~~~~---------l-------~~~~~~iKlI~fDLDGTLld~-----~~~is~~~~eaL~~ 347 (591)
.|||+.|+..|++.+........ + ++...+.|+|+||+||||++. ...++++++++|++
T Consensus 446 ~~~~~~w~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~ 525 (726)
T PRK14501 446 RYDVHKWASDFLDELREAAEKNKAFASKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRR 525 (726)
T ss_pred hCCHHHHHHHHHHHHHHHHhhhhccccccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCCCCHHHHHHHHH
Confidence 59999999999987765522110 0 333456799999999999973 24578999999999
Q ss_pred HHhc-CCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEEcCCCcEEEeecCCH---HHHHHHHHHHHh
Q 007731 348 ALSR-GLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVHGRQGREIFRRNLDR---DFCREAYQYSWE 423 (591)
Q Consensus 348 L~~~-Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~d~~g~~i~~~~l~~---e~v~eil~~l~~ 423 (591)
|.+. |+.|+++|||+...+..++..+++ ++|+|| |+.++..++.+......+. +.+.++++.+.+
T Consensus 526 L~~d~g~~V~ivSGR~~~~l~~~~~~~~l----~liaen-------G~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~ 594 (726)
T PRK14501 526 LAADPNTDVAIISGRDRDTLERWFGDLPI----HLVAEH-------GAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVD 594 (726)
T ss_pred HHcCCCCeEEEEeCCCHHHHHHHhCCCCe----EEEEeC-------CEEEeCCCCceEECCCcchhHHHHHHHHHHHHHh
Confidence 9994 999999999999999998876543 566665 6666644444332222232 334444444433
Q ss_pred CCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEE
Q 007731 424 HKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVV 503 (591)
Q Consensus 424 ~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv 503 (591)
..-...+........ ++ |.. ....+. ......+...+...+......+
T Consensus 595 ~~~gs~ie~k~~~l~---------~~--~r~----~d~~~~-----------------~~~a~~l~~~l~~~~~~~~~~v 642 (726)
T PRK14501 595 RTPGSFIEEKEASLA---------WH--YRN----ADPELG-----------------EARANELILALSSLLSNAPLEV 642 (726)
T ss_pred cCCCcEEEEcceEEE---------EE--ccC----CCHHHH-----------------HHHHHHHHHHHHHHhcCCCeEE
Confidence 221111111111000 00 000 000000 0011223344444333333334
Q ss_pred EecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHC---CceEEecCCcHHHHhhcceecCCCChH
Q 007731 504 QAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELA---SLGIALSNGSEKAKAVANVIGASNDED 580 (591)
Q Consensus 504 ~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~a---g~gVAmgNA~~elk~~Ad~Vt~s~~ed 580 (591)
.++..++||.|+++|||.|++++++ +++++.+++|||+.||++||+.+ +++|+|||+ +..|++++.++ +
T Consensus 643 ~~g~~~veV~p~~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~--~ 714 (726)
T PRK14501 643 LRGNKVVEVRPAGVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQ--R 714 (726)
T ss_pred EECCeEEEEEECCCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCH--H
Confidence 4577899999999999999999999 67789999999999999999996 689999985 45788888876 4
Q ss_pred HHHHHHHHh
Q 007731 581 GVADAIYRY 589 (591)
Q Consensus 581 GVa~~L~~~ 589 (591)
+|.++|+.+
T Consensus 715 eV~~~L~~l 723 (726)
T PRK14501 715 EVRELLRRL 723 (726)
T ss_pred HHHHHHHHH
Confidence 499999875
No 32
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.89 E-value=1.6e-21 Score=197.03 Aligned_cols=249 Identities=15% Similarity=0.202 Sum_probs=158.1
Q ss_pred ceEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEE-
Q 007731 319 FRYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVH- 397 (591)
Q Consensus 319 iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~- 397 (591)
+|+||+||||||++++..+++.++++|++|+++|+.|++||||+...+..+.+.+++ .+.+|++||..|+.......
T Consensus 1 ~KLIftDLDGTLLd~~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl--~~p~I~eNGA~I~~p~~~~~~ 78 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRL--EHPFICEDGSAIYVPEHYFPA 78 (302)
T ss_pred CcEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCC--CCeEEEeCCcEEEEccccccc
Confidence 489999999999999888999999999999999999999999999999999999998 34566666555554422110
Q ss_pred --------cCCCcEEEeecCCHHHHHHHHHHHHh-CCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhc
Q 007731 398 --------GRQGREIFRRNLDRDFCREAYQYSWE-HKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLA 468 (591)
Q Consensus 398 --------d~~g~~i~~~~l~~e~v~eil~~l~~-~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 468 (591)
...+-.+..-..+...++.+++.+.. .+..+..|..-. .+.+.....-+ ..-.....
T Consensus 79 ~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t---------~~ei~~~TGL~-----~~~A~~A~ 144 (302)
T PRK12702 79 GILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWT---------ASELAAATGIP-----LEEAERAQ 144 (302)
T ss_pred cccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCC---------HHHHHHHhCcC-----HHHHHHHH
Confidence 01122234445677888888877765 344443332211 01111000000 00011111
Q ss_pred ccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecC------------------C---CCCHHHHHHHHH
Q 007731 469 TVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVP------------------P---GTSKGSGVKMLL 527 (591)
Q Consensus 469 ~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p------------------~---gvsKg~AL~~L~ 527 (591)
.......+++..++... .+.+. ...++++..+ .|+.++. . +++||.|+++|.
T Consensus 145 ~Re~SEp~~w~~~~~~~---~~~~~---~~g~~~~~Gg-Rf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~ 217 (302)
T PRK12702 145 KREYSEIFSYSGDPARL---REAFA---QQEANLTQHL-LRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLL 217 (302)
T ss_pred hccCCcceEecCCHHHH---HHHHH---HcCCeEEecC-ceEEecccccccccccccccccccccccCCCCHHHHHHHHH
Confidence 12222233333332221 22222 2235666555 4666665 5 899999999999
Q ss_pred HHcCCC--CCcEEEEecChhhHHHHHHCCceEEecCCcH--------HH--H-hhcc-eecCCCChHHHHHHHHHhh
Q 007731 528 DHLGVS--TKEIMAIGDGENDVEMLELASLGIALSNGSE--------KA--K-AVAN-VIGASNDEDGVADAIYRYA 590 (591)
Q Consensus 528 e~lgI~--~eeviafGDs~NDi~Mlk~ag~gVAmgNA~~--------el--k-~~Ad-~Vt~s~~edGVa~~L~~~~ 590 (591)
+.+.-. .-.++++|||.||++||+.++++|.+.+... .+ . .... +.+....-.|+.+++.+++
T Consensus 218 ~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~GP~GW~e~v~~~l 294 (302)
T PRK12702 218 DCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVLPSPIADSLWKEALRLGGPEVQPQWQLAQLPGPEGWNEVVLMWL 294 (302)
T ss_pred HHHHhccCCceEEEecCChhhHHHHHhCCeeEEecCCCCCCcccccccccCcccCccceecCCCCcHHHHHHHHHHH
Confidence 998653 3379999999999999999999999976432 22 1 1122 3455567789999988775
No 33
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.83 E-value=2.3e-19 Score=208.10 Aligned_cols=252 Identities=16% Similarity=0.204 Sum_probs=154.8
Q ss_pred ccccccchHHHHhhchhhhccc------------------------cc-------cccCCCceEEEEecCCCccCCC---
Q 007731 289 AYDSETNTNIQVENSDDRKQEG------------------------SL-------RFYKPKFRYIFCDMDGTLLNSQ--- 334 (591)
Q Consensus 289 a~d~~~~~~~~l~~~~~~~~~~------------------------~l-------~~~~~~iKlI~fDLDGTLld~~--- 334 (591)
.+|+..|++.||..+....+.. .+ .+.+.+.++|++|+||||++..
T Consensus 535 ~~d~~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~ 614 (854)
T PLN02205 535 THDVGYWARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASID 614 (854)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCcccc
Confidence 4899999999998665542110 00 2334468999999999999765
Q ss_pred CCCCHHHHHHHHHH-HhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEEcCCCcEEEee--c-CC
Q 007731 335 SKISLTTAKALKEA-LSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVHGRQGREIFRR--N-LD 410 (591)
Q Consensus 335 ~~is~~~~eaL~~L-~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~d~~g~~i~~~--~-l~ 410 (591)
..+++++.++|++| ...|+.|+|+|||+...+.+++..+. ..++++||| +.+...++ ..+.. . .+
T Consensus 615 ~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~---~l~laaEHG-------~~ir~~~~-~~w~~~~~~~~ 683 (854)
T PLN02205 615 KSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCE---KLGIAAEHG-------YFLRLKRD-VEWETCVPVAD 683 (854)
T ss_pred CCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCC---CeEEEEeCC-------EEEEeCCC-ceeeecchhhh
Confidence 36789999999998 45699999999999999999997542 246777774 55443222 12221 1 12
Q ss_pred HHHHHHHHHHHHhC--CCCEE-EEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCeeEEEEecChhhHHHh
Q 007731 411 RDFCREAYQYSWEH--KVPLI-AFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQKLIFLDTAEGVATT 487 (591)
Q Consensus 411 ~e~v~eil~~l~~~--~i~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki~~~~~~~~~~~~ 487 (591)
..+...+...+..+ ..+.. +....... .++ |. ...+++.. . . .+.
T Consensus 684 ~~w~~~v~~i~~~y~ertpGs~IE~K~~sl---------v~H--yR----~adpd~~~------------~-q----a~e 731 (854)
T PLN02205 684 CSWKQIAEPVMQLYTETTDGSTIEDKETAL---------VWC--YE----DADPDFGS------------C-Q----AKE 731 (854)
T ss_pred HHHHHHHHHHHHHHhcCCCchhheecceEE---------EEe--hh----hCChHHhh------------h-h----hHH
Confidence 22222222222211 11110 11000000 001 00 00000000 0 0 112
Q ss_pred HHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHH---HcCCCCCcEEEEecChhhHHHHHHCC----------
Q 007731 488 IRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLD---HLGVSTKEIMAIGDGENDVEMLELAS---------- 554 (591)
Q Consensus 488 l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e---~lgI~~eeviafGDs~NDi~Mlk~ag---------- 554 (591)
+...+...+......+.++..++||.|.++|||.|++.+++ .+|++++++++|||+.||++||+.++
T Consensus 732 l~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~ 811 (854)
T PLN02205 732 LLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAP 811 (854)
T ss_pred HHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccc
Confidence 33333333333334577888999999999999999999985 46899999999999999999999875
Q ss_pred ----ceEEecCCcHHHHhhcceecCCCChHHHHHHHHHh
Q 007731 555 ----LGIALSNGSEKAKAVANVIGASNDEDGVADAIYRY 589 (591)
Q Consensus 555 ----~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~~~ 589 (591)
++|.||..+ ..|.|...+. +.|.++|+.+
T Consensus 812 ~~~~~~v~VG~~~----S~A~y~L~d~--~eV~~lL~~L 844 (854)
T PLN02205 812 RAEVFACTVGQKP----SKAKYYLDDT--AEIVRLMQGL 844 (854)
T ss_pred cccceeEEECCCC----ccCeEecCCH--HHHHHHHHHH
Confidence 567777542 3466655554 5588887764
No 34
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=99.81 E-value=1.3e-18 Score=175.69 Aligned_cols=220 Identities=19% Similarity=0.137 Sum_probs=135.5
Q ss_pred CceEEEEecCCCccCCC-----CCCCHHHHHHHHHHHhc-CCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEe
Q 007731 318 KFRYIFCDMDGTLLNSQ-----SKISLTTAKALKEALSR-GLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFI 391 (591)
Q Consensus 318 ~iKlI~fDLDGTLld~~-----~~is~~~~eaL~~L~~~-Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~ 391 (591)
+.++|+||+||||++.. ..++++..++|++|.+. ++.|+|+|||+...+...+ .++ ..+++++|
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~---~~~-~~~l~g~h------ 71 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGV---KLP-GLGLAGEH------ 71 (244)
T ss_pred CcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccC---CCC-ceeEEeec------
Confidence 34789999999999732 34789999999999887 5778999999876654433 221 23456665
Q ss_pred cCEEEEcCCCcEEEeecCC------HHHHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHH
Q 007731 392 QGLLVHGRQGREIFRRNLD------RDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIED 465 (591)
Q Consensus 392 NGA~I~d~~g~~i~~~~l~------~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 465 (591)
|+.++. .|........+ .+.+.++.+++.+. -...+......+. +++... +
T Consensus 72 -G~~~~~-~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~---------~hyr~a-------~---- 128 (244)
T TIGR00685 72 -GCEMKD-NGSCQDWVNLTEKIPSWKVRANELREEITTR-PGVFIERKGVALA---------WHYRQA-------P---- 128 (244)
T ss_pred -CEEEec-CCCcceeeechhhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEE---------EEeccC-------C----
Confidence 666664 33221111111 12233444444443 1111121111111 111000 0
Q ss_pred hhcccCeeEEEEecChhhHHHhHHHHHHHhccC-CeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecCh
Q 007731 466 LLATVDIQKLIFLDTAEGVATTIRPYWSEATKD-RANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGE 544 (591)
Q Consensus 466 ~l~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~-~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~ 544 (591)
+++.....+.+.+...... .+. +..+..++|+.|.++|||.+++.++++++++.+++++|||+.
T Consensus 129 --------------d~~~~~~~~~~~~~~~~~~~~~~-v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~ 193 (244)
T TIGR00685 129 --------------VPELARFRAKELKEKILSFTDLE-VMDGKAVVELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDI 193 (244)
T ss_pred --------------CcHHHHHHHHHHHHHHhcCCCEE-EEECCeEEEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCC
Confidence 0011111112222211121 233 446778999999999999999999999999999999999999
Q ss_pred hhHHHHHHC--------CceEEecCCcHHHHhhcceecCCCChHHHHHHHHHh
Q 007731 545 NDVEMLELA--------SLGIALSNGSEKAKAVANVIGASNDEDGVADAIYRY 589 (591)
Q Consensus 545 NDi~Mlk~a--------g~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~~~ 589 (591)
||++||+.+ +++|+|+.+ ..+..|++++.+..+ |.++|+.+
T Consensus 194 ~D~~~~~~~~~~~~~~g~~~v~v~~g--~~~~~A~~~~~~~~~--v~~~L~~l 242 (244)
T TIGR00685 194 TDEDAFRVVNNQWGNYGFYPVPIGSG--SKKTVAKFHLTGPQQ--VLEFLGLL 242 (244)
T ss_pred cHHHHHHHHhcccCCCCeEEEEEecC--CcCCCceEeCCCHHH--HHHHHHHH
Confidence 999999998 478888633 456679998876554 88888765
No 35
>PLN02580 trehalose-phosphatase
Probab=99.77 E-value=3e-17 Score=173.44 Aligned_cols=230 Identities=20% Similarity=0.230 Sum_probs=137.7
Q ss_pred CCCceEEEEecCCCccCC-----CCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEE
Q 007731 316 KPKFRYIFCDMDGTLLNS-----QSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVF 390 (591)
Q Consensus 316 ~~~iKlI~fDLDGTLld~-----~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~ 390 (591)
+.+-.++|+|+||||.+- ...++++.+++|++|.+. ..++|+|||+...+.+++...++ +++++||..+.
T Consensus 116 ~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l~~~~l----~laGsHG~e~~ 190 (384)
T PLN02580 116 KGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELVGLTEL----YYAGSHGMDIM 190 (384)
T ss_pred hcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHhCCCCc----cEEEeCCceee
Confidence 334579999999999853 345799999999999887 47999999999999988865443 67788754432
Q ss_pred ec-CEE--------EE--cCCCcEEEeecCCHH---HHHHHHHHHHhC--CCC-EEEEeCCceeeecCCccccccccccc
Q 007731 391 IQ-GLL--------VH--GRQGREIFRRNLDRD---FCREAYQYSWEH--KVP-LIAFSGDRCLTLFDHPLVDSLHTTYH 453 (591)
Q Consensus 391 ~N-GA~--------I~--d~~g~~i~~~~l~~e---~v~eil~~l~~~--~i~-~~i~~~~~~~~~~~~~~~~~~~~~~~ 453 (591)
.. |.. +. +.+++.........+ .+.++.+.+.+. ..+ ..+..+..+.. +|+...
T Consensus 191 ~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~sva---------vHYR~a 261 (384)
T PLN02580 191 GPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVS---------VHYRNV 261 (384)
T ss_pred cCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEE---------EEeCCC
Confidence 21 100 00 001111000001122 123444443322 111 12222222211 111100
Q ss_pred CCcccccccHHHhhcccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecC-CCCCHHHHHHHHHHHcCC
Q 007731 454 EPKAEIIPAIEDLLATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVP-PGTSKGSGVKMLLDHLGV 532 (591)
Q Consensus 454 ~~~~~~~~~l~~~l~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p-~gvsKg~AL~~L~e~lgI 532 (591)
.. .. .......+...+.. +. .+.+ ..+..++||.| .++|||.|++++++++|+
T Consensus 262 ~~------~~-----------------~~~~~~~l~~~l~~-~~-~l~v-~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~ 315 (384)
T PLN02580 262 DE------KN-----------------WPLVAQCVHDVLKK-YP-RLRL-THGRKVLEVRPVIDWNKGKAVEFLLESLGL 315 (384)
T ss_pred Cc------hH-----------------HHHHHHHHHHHHHh-CC-ceEE-EeCCeEEEEecCCCCCHHHHHHHHHHhcCC
Confidence 00 00 01111222222221 11 2444 45568999999 599999999999999998
Q ss_pred CCC-c--EEEEecChhhHHHHHH-----CCceEEecCCcHHHHhhcceecCCCChHHHHHHHHHh
Q 007731 533 STK-E--IMAIGDGENDVEMLEL-----ASLGIALSNGSEKAKAVANVIGASNDEDGVADAIYRY 589 (591)
Q Consensus 533 ~~e-e--viafGDs~NDi~Mlk~-----ag~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~~~ 589 (591)
+.. . +++|||+.||++||+. +|+||+|+|+.++. .|+|...+. +.|.++|+.+
T Consensus 316 ~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L~dp--~eV~~~L~~L 376 (384)
T PLN02580 316 SNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSLRDP--SEVMEFLKSL 376 (384)
T ss_pred CcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEcCCH--HHHHHHHHHH
Confidence 765 3 3899999999999996 58999999987654 467776655 4588888765
No 36
>PLN03017 trehalose-phosphatase
Probab=99.71 E-value=1.1e-15 Score=160.41 Aligned_cols=222 Identities=19% Similarity=0.235 Sum_probs=134.5
Q ss_pred CceEEEEecCCCcc---C-CCC-CCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEec
Q 007731 318 KFRYIFCDMDGTLL---N-SQS-KISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQ 392 (591)
Q Consensus 318 ~iKlI~fDLDGTLl---d-~~~-~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~N 392 (591)
+-.+||+|+||||+ + .+. .++++++++|++|. +|+.|+|+|||++..+..++... ..+++++|
T Consensus 110 k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~l~----~l~l~g~h------- 177 (366)
T PLN03017 110 KQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFVKLA----ELYYAGSH------- 177 (366)
T ss_pred CCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhhccc----CceEEEcC-------
Confidence 44689999999999 3 444 69999999999998 78999999999999998875321 24566666
Q ss_pred CEEEEcCCCcE----------EEeecC-CHHHHHHHHHHHHhC--CCC-EEEEeCCceeeecCCcccccccccccCCccc
Q 007731 393 GLLVHGRQGRE----------IFRRNL-DRDFCREAYQYSWEH--KVP-LIAFSGDRCLTLFDHPLVDSLHTTYHEPKAE 458 (591)
Q Consensus 393 GA~I~d~~g~~----------i~~~~l-~~e~v~eil~~l~~~--~i~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (591)
|+.+....+.. .+.... ..+.+.++...+.+. ..+ ..+..+..+.. +|+....+
T Consensus 178 Ga~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~va---------vHyR~ad~--- 245 (366)
T PLN03017 178 GMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCAS---------VHFRCVDE--- 245 (366)
T ss_pred CcEEecCCCcceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEE---------EEcCcCCH---
Confidence 45544322111 111100 112233444433321 122 22222222221 11110000
Q ss_pred ccccHHHhhcccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCC-CCCHHHHHHHHHHHcCCCC---
Q 007731 459 IIPAIEDLLATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPP-GTSKGSGVKMLLDHLGVST--- 534 (591)
Q Consensus 459 ~~~~l~~~l~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~-gvsKg~AL~~L~e~lgI~~--- 534 (591)
. . .......+...+... . .+. +..|...+|+.|. ++|||.|+++|++.++...
T Consensus 246 ----~-~---------------~~~l~~~~~~vl~~~-~-~l~-v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~ 302 (366)
T PLN03017 246 ----K-K---------------WSELVLQVRSVLKNF-P-TLK-LTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNN 302 (366)
T ss_pred ----H-H---------------HHHHHHHHHHHHHhC-C-CcE-EeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCC
Confidence 0 0 011112222222221 1 133 4567789999995 9999999999999998653
Q ss_pred CcEEEEecChhhHHHHHHC-----CceEEecCCcHHHHhhcceecCCCChHHHHHHHHHhh
Q 007731 535 KEIMAIGDGENDVEMLELA-----SLGIALSNGSEKAKAVANVIGASNDEDGVADAIYRYA 590 (591)
Q Consensus 535 eeviafGDs~NDi~Mlk~a-----g~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~~~~ 590 (591)
.-.++|||+.+|.+||+.. |+||.||..+.+ ..|.|...+. +.|.++|+++.
T Consensus 303 ~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k~--T~A~y~L~dp--~eV~~fL~~L~ 359 (366)
T PLN03017 303 VFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPKD--TDASYSLQDP--SEVMDFLARLV 359 (366)
T ss_pred ceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCCC--CcceEeCCCH--HHHHHHHHHHH
Confidence 3589999999999999975 578888864332 4577777554 55888888763
No 37
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.70 E-value=8.2e-17 Score=151.22 Aligned_cols=72 Identities=17% Similarity=0.198 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecCCcHHHHhhcceecCCCC-hHHHHHHHHHhh
Q 007731 519 KGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSNGSEKAKAVANVIGASND-EDGVADAIYRYA 590 (591)
Q Consensus 519 Kg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s~~-edGVa~~L~~~~ 590 (591)
|..++..+++++|+++++|++|||+.||++|++.+|++++|.++.+.++..|++++.++. ++|+++++++++
T Consensus 77 k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~~ 149 (154)
T TIGR01670 77 KLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCELLL 149 (154)
T ss_pred hHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 567777899999999999999999999999999999999999999999999999998886 555999999875
No 38
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.69 E-value=1.3e-16 Score=151.79 Aligned_cols=137 Identities=17% Similarity=0.308 Sum_probs=111.4
Q ss_pred CceEEEEecCCCccCCC----------CCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCC
Q 007731 318 KFRYIFCDMDGTLLNSQ----------SKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAP 387 (591)
Q Consensus 318 ~iKlI~fDLDGTLld~~----------~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~ 387 (591)
.+|+++||+||||.|.. ..++...-.+++.|+++|++++++|+++...+...++.+++.
T Consensus 6 ~i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~----------- 74 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIK----------- 74 (169)
T ss_pred cCeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCc-----------
Confidence 48999999999999852 135677889999999999999999999988888888877651
Q ss_pred EEEecCEEEEcCCCcEEEeecCCHHHHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhh
Q 007731 388 GVFIQGLLVHGRQGREIFRRNLDRDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLL 467 (591)
Q Consensus 388 ~I~~NGA~I~d~~g~~i~~~~l~~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 467 (591)
..+..
T Consensus 75 ---------------~~f~~------------------------------------------------------------ 79 (169)
T TIGR02726 75 ---------------RFHEG------------------------------------------------------------ 79 (169)
T ss_pred ---------------EEEec------------------------------------------------------------
Confidence 00000
Q ss_pred cccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhH
Q 007731 468 ATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDV 547 (591)
Q Consensus 468 ~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi 547 (591)
+ .+|...++.+++++|+++++|++|||+.||+
T Consensus 80 --------------------------------------------~----kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi 111 (169)
T TIGR02726 80 --------------------------------------------I----KKKTEPYAQMLEEMNISDAEVCYVGDDLVDL 111 (169)
T ss_pred --------------------------------------------C----CCCHHHHHHHHHHcCcCHHHEEEECCCHHHH
Confidence 0 1234566678899999999999999999999
Q ss_pred HHHHHCCceEEecCCcHHHHhhcceecCCCChHHH-HHHHHH
Q 007731 548 EMLELASLGIALSNGSEKAKAVANVIGASNDEDGV-ADAIYR 588 (591)
Q Consensus 548 ~Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s~~edGV-a~~L~~ 588 (591)
+|++.+|+++||+||.+.+|+.|++|+.+++++|+ .++++.
T Consensus 112 ~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~v~e~~e~ 153 (169)
T TIGR02726 112 SMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGAVREVAEL 153 (169)
T ss_pred HHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCHHHHHHHH
Confidence 99999999999999999999999999988877776 444444
No 39
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.68 E-value=1.8e-16 Score=153.25 Aligned_cols=72 Identities=18% Similarity=0.246 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecCCcHHHHhhcceecCCCChHHHHHHHHHhh
Q 007731 519 KGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSNGSEKAKAVANVIGASNDEDGVADAIYRYA 590 (591)
Q Consensus 519 Kg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~~~~ 590 (591)
|+.+++.+++++|++++++++|||+.||++|++.+|++++|+++.+.++..|++++..+..+|+.+.|.+++
T Consensus 97 k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i 168 (183)
T PRK09484 97 KLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLL 168 (183)
T ss_pred HHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHH
Confidence 557778899999999999999999999999999999999999999989999999999888888877766554
No 40
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.66 E-value=7.2e-15 Score=170.60 Aligned_cols=222 Identities=14% Similarity=0.161 Sum_probs=136.2
Q ss_pred ccccccchHHHHhhchhhhcccc---------c-------cccCCCceEEEEecCCCccCCC--------CCCCHHHHHH
Q 007731 289 AYDSETNTNIQVENSDDRKQEGS---------L-------RFYKPKFRYIFCDMDGTLLNSQ--------SKISLTTAKA 344 (591)
Q Consensus 289 a~d~~~~~~~~l~~~~~~~~~~~---------l-------~~~~~~iKlI~fDLDGTLld~~--------~~is~~~~ea 344 (591)
.++|..|++.||+.+........ + .+...+-+++++|+||||++.. ..++++.+++
T Consensus 461 ~~~~~~Wa~~fl~~l~~~~~~~~~~~~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~ 540 (797)
T PLN03063 461 THSAQKWADDFMSELNDIIVEAELRTRNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKET 540 (797)
T ss_pred hCCHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCccccccCCCCHHHHHH
Confidence 48999999999986655532110 1 2333455899999999999642 2378899999
Q ss_pred HHHHHhc-CCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEEcCCCcEEE--eecCCHHHHHHHH---
Q 007731 345 LKEALSR-GLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVHGRQGREIF--RRNLDRDFCREAY--- 418 (591)
Q Consensus 345 L~~L~~~-Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~d~~g~~i~--~~~l~~e~v~eil--- 418 (591)
|++|.+. +..|+|+|||+...+..++..+++ ++++|| |+.+....+.+.. ...++.+|...+.
T Consensus 541 L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l----~l~aeH-------G~~~r~~~~~w~~~~~~~~~~~w~~~v~~~l 609 (797)
T PLN03063 541 LKALCSDPKTTVVVLSRSGKDILDKNFGEYNI----WLAAEN-------GMFLRHTSGEWVTTMPEHMNLDWVDGVKNVF 609 (797)
T ss_pred HHHHHcCCCCEEEEEeCCCHHHHHHHhCCCCC----cEEEeC-------CEEEecCCCceeeccccccChhHHHHHHHHH
Confidence 9999886 789999999999999999976543 677777 5555433443321 1223445544343
Q ss_pred HHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCeeEEEEecChhhHHHhHHHHHHH-hcc
Q 007731 419 QYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQKLIFLDTAEGVATTIRPYWSE-ATK 497 (591)
Q Consensus 419 ~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki~~~~~~~~~~~~l~~~l~~-~~~ 497 (591)
+.+.+.--...+..+..... +|+.. ..++.. ......+...+.+ ...
T Consensus 610 ~~~~~rtpGs~iE~K~~sla---------~HyR~------adp~~g-----------------~~~a~el~~~l~~~~~~ 657 (797)
T PLN03063 610 KYFTDRTPRSYVEKSETSLV---------WNYEY------ADVEFG-----------------RAQARDMLQHLWAGPIS 657 (797)
T ss_pred HHHHHhCCCcEEEEcCeEEE---------EEcCC------CChHHH-----------------HHHHHHHHHHHHHhhcc
Confidence 33333211122222211111 11100 000000 0111222223211 112
Q ss_pred C-CeEEEEecCCeeeecCCCCCHHHHHHHHHHHc------CCCCCcEEEEecCh-hhHHHHHHCC
Q 007731 498 D-RANVVQAIPDMLEIVPPGTSKGSGVKMLLDHL------GVSTKEIMAIGDGE-NDVEMLELAS 554 (591)
Q Consensus 498 ~-~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~l------gI~~eeviafGDs~-NDi~Mlk~ag 554 (591)
. .+. +..|...+|+.|.++|||.|++.+++++ +-.++.++|+||.. .|.+||+..+
T Consensus 658 ~~~~~-v~~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~ 721 (797)
T PLN03063 658 NASVD-VVRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFE 721 (797)
T ss_pred CCCcE-EEECCeEEEEEcCCCChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhcc
Confidence 1 233 4577789999999999999999999986 33568899999985 4999999753
No 41
>PLN02151 trehalose-phosphatase
Probab=99.65 E-value=1.1e-14 Score=152.28 Aligned_cols=227 Identities=19% Similarity=0.233 Sum_probs=133.4
Q ss_pred CceEEEEecCCCcc----CCCC-CCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEec
Q 007731 318 KFRYIFCDMDGTLL----NSQS-KISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQ 392 (591)
Q Consensus 318 ~iKlI~fDLDGTLl----d~~~-~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~N 392 (591)
+-.+|++|+||||+ +.+. .++++++++|++|. ++..++|+|||+...+..++...+ .+++++||..+...
T Consensus 97 ~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~~~~----l~laGsHG~e~~~p 171 (354)
T PLN02151 97 KQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVKLTE----LYYAGSHGMDIKGP 171 (354)
T ss_pred CceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcCCcc----ceEEEeCCceeecC
Confidence 34689999999999 4444 78999999999998 457999999999999988875433 36777775433221
Q ss_pred C-EEEEcCCCcEEEeecCC---HHHHHHHHHHHHhC--CCC-EEEEeCCceeeecCCcccccccccccCCcccccccHHH
Q 007731 393 G-LLVHGRQGREIFRRNLD---RDFCREAYQYSWEH--KVP-LIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIED 465 (591)
Q Consensus 393 G-A~I~d~~g~~i~~~~l~---~e~v~eil~~l~~~--~i~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 465 (591)
+ ...+...++... .... .+.+.++.+.+.+. ..+ ..+..+..+.. +|+....+. ..
T Consensus 172 ~~g~~~~~~~~~~~-~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~sla---------vHYR~a~~~-----~~-- 234 (354)
T PLN02151 172 EQGSKYKKENQSLL-CQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCAS---------VHFRCVEEN-----KW-- 234 (354)
T ss_pred CCCccccccccccc-cccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEE---------EEeCCCChH-----HH--
Confidence 1 000000001111 1112 22333444444321 222 12222222211 111110000 00
Q ss_pred hhcccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCC-CCCHHHHHHHHHHHcCCCCC---cEEEEe
Q 007731 466 LLATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPP-GTSKGSGVKMLLDHLGVSTK---EIMAIG 541 (591)
Q Consensus 466 ~l~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~-gvsKg~AL~~L~e~lgI~~e---eviafG 541 (591)
......+...+.. +. .+. +..|...+|+.|. ++|||.|++++++.++.... -++++|
T Consensus 235 ----------------~~l~~~l~~v~~~-~~-~l~-v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiG 295 (354)
T PLN02151 235 ----------------SDLANQVRSVLKN-YP-KLM-LTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIG 295 (354)
T ss_pred ----------------HHHHHHHHHHHhh-CC-CcE-EecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEc
Confidence 0111122222211 11 133 4567789999995 99999999999999876432 489999
Q ss_pred cChhhHHHHHHC-----CceEEecCCcHHHHhhcceecCCCChHHHHHHHHHh
Q 007731 542 DGENDVEMLELA-----SLGIALSNGSEKAKAVANVIGASNDEDGVADAIYRY 589 (591)
Q Consensus 542 Ds~NDi~Mlk~a-----g~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~~~ 589 (591)
|+.+|.+||+.. |+||.|+....+ -.|+|...+. +.|.++|+.+
T Consensus 296 DD~TDEDaF~~L~~~~~G~gI~Vg~~~k~--T~A~y~L~dp--~eV~~~L~~L 344 (354)
T PLN02151 296 DDRTDEDAFKILRDKKQGLGILVSKYAKE--TNASYSLQEP--DEVMEFLERL 344 (354)
T ss_pred CCCcHHHHHHHHhhcCCCccEEeccCCCC--CcceEeCCCH--HHHHHHHHHH
Confidence 999999999963 678888754322 2577777665 4488888765
No 42
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.59 E-value=8.4e-14 Score=133.13 Aligned_cols=254 Identities=19% Similarity=0.274 Sum_probs=150.1
Q ss_pred cCCCceEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEec-C
Q 007731 315 YKPKFRYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQ-G 393 (591)
Q Consensus 315 ~~~~iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~N-G 393 (591)
..+++++||+||||||++.... .+.....+.+|++.|+.|++||.++...+..+-+.+++++ ..+|+|||..|++. |
T Consensus 3 s~~~~~lIFtDlD~TLl~~~ye-~~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~-~p~iaEnG~aI~~p~~ 80 (274)
T COG3769 3 SIQMPLLIFTDLDGTLLPHSYE-WQPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG-LPLIAENGAAIYLPKG 80 (274)
T ss_pred ccccceEEEEcccCcccCCCCC-CCccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC-CceeecCCceEEeccc
Confidence 3456899999999999995443 3445778889999999999999999999999999999853 67788887666654 2
Q ss_pred EEEEcCCCcEE----E-eecCCHHHHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhc
Q 007731 394 LLVHGRQGREI----F-RRNLDRDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLA 468 (591)
Q Consensus 394 A~I~d~~g~~i----~-~~~l~~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 468 (591)
..-.+..++.+ + +-.+.-+.+++.++.+.+. ..+.-+ .+...+.+......+.. ...+..
T Consensus 81 ~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~-~g~~~~---------~~~d~~ei~e~TGlpre-----~aaLa~ 145 (274)
T COG3769 81 WFPFDGKPREISGISHIELGKVLEKIREKLDKLEEH-FGFTTF---------DDVDDEEIAEWTGLPRE-----QAALAM 145 (274)
T ss_pred ccccCCCCceecceEeeehhhhHHHHHHHHHHHHHH-hCeeEe---------ccCCHHHHHHHhCCChH-----HhHHHH
Confidence 22222222222 1 1123344555555555442 111111 11111111111111110 011111
Q ss_pred ccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcC-CCCC-cEEEEecChhh
Q 007731 469 TVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLG-VSTK-EIMAIGDGEND 546 (591)
Q Consensus 469 ~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lg-I~~e-eviafGDs~ND 546 (591)
.......++..+.+....++...+++ ..+++++..+ +-.+......||.|.+++++.+. .... -++++|||.||
T Consensus 146 ~rEyseti~~rs~d~~~~~~~~~L~e---~glt~v~gar-f~~v~~as~gKg~Aa~~ll~~y~rl~~~r~t~~~GDg~nD 221 (274)
T COG3769 146 LREYSETIIWRSSDERMAQFTARLNE---RGLTFVHGAR-FWHVLDASAGKGQAANWLLETYRRLGGARTTLGLGDGPND 221 (274)
T ss_pred HHHhhhheeecccchHHHHHHHHHHh---cCceEEeccc-eEEEeccccCccHHHHHHHHHHHhcCceeEEEecCCCCCc
Confidence 11222233444444444444444442 2366666664 55577777889999999998762 2333 49999999999
Q ss_pred HHHHHHCCceEEecCCc-HHHH---hhcce--ecCCCChHHHHHHHHHh
Q 007731 547 VEMLELASLGIALSNGS-EKAK---AVANV--IGASNDEDGVADAIYRY 589 (591)
Q Consensus 547 i~Mlk~ag~gVAmgNA~-~elk---~~Ad~--Vt~s~~edGVa~~L~~~ 589 (591)
++||...++++.|++=. +.++ ..... ++....-+|+.+.++++
T Consensus 222 ~Pl~ev~d~AfiV~~lnre~~~lv~~i~~vv~~~~~~~~~~~~e~~~~~ 270 (274)
T COG3769 222 APLLEVMDYAFIVKGLNREGVHLVSSIPAVVERIQREGPEGWREGLDHF 270 (274)
T ss_pred ccHHHhhhhheeecccchhhhhccccchhheeeccccCchHHHHHhhhh
Confidence 99999999999998532 2222 22222 23344456888887654
No 43
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.59 E-value=3e-15 Score=156.63 Aligned_cols=71 Identities=30% Similarity=0.375 Sum_probs=67.5
Q ss_pred CCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecCCcHHHHhhcceecCCCChHHHHHHHH
Q 007731 516 GTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSNGSEKAKAVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 516 gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~ 587 (591)
+.+|+.+++.+++++|+++++|++||||.||++|++.||+|||| ||.|.+++.|++++.+++-+||...|-
T Consensus 246 ~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 246 AQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred cccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 46899999999999999999999999999999999999999999 999999999999999999999988763
No 44
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.58 E-value=7e-14 Score=162.19 Aligned_cols=222 Identities=16% Similarity=0.257 Sum_probs=137.2
Q ss_pred cccccccchHHHHhhchhhhcccc---------c-------cccCCCceEEEEecCCCccCCC--------------CCC
Q 007731 288 SAYDSETNTNIQVENSDDRKQEGS---------L-------RFYKPKFRYIFCDMDGTLLNSQ--------------SKI 337 (591)
Q Consensus 288 ~a~d~~~~~~~~l~~~~~~~~~~~---------l-------~~~~~~iKlI~fDLDGTLld~~--------------~~i 337 (591)
..+|+..|++.|+..+........ + .+...+-+++++|+||||++-. ..+
T Consensus 544 ~~~d~~~Wa~~fl~~L~~~~~~~~~~~~~~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p 623 (934)
T PLN03064 544 TTHTAQEWAETFVSELNDTVVEAQLRTRQVPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRL 623 (934)
T ss_pred ccCCHHHHHHHHHHHHHHHHhhhhccccccCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCcccccccccccccCC
Confidence 469999999999986655521111 0 2333456899999999999632 236
Q ss_pred CHHHHHHHHHHHhc-CCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEEcCCCcEE--EeecCCHHHH
Q 007731 338 SLTTAKALKEALSR-GLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVHGRQGREI--FRRNLDRDFC 414 (591)
Q Consensus 338 s~~~~eaL~~L~~~-Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~d~~g~~i--~~~~l~~e~v 414 (591)
+++.+++|++|.+. +..|+|+|||+...+..++..+++ ++++|| |+.+...++.+. ....++.+|.
T Consensus 624 ~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~L----~LaAEH-------G~~~R~~~~~w~~~~~~~~~~~W~ 692 (934)
T PLN03064 624 HPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFDM----WLAAEN-------GMFLRHTKGEWMTTMPEHLNMDWV 692 (934)
T ss_pred CHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCCc----eEEeeC-------CeEEecCCCcceeccccccchHHH
Confidence 78999999999886 789999999999999999977654 677777 555544344443 1222344554
Q ss_pred HHH---HHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCeeEEEEecChhhHHHhHHHH
Q 007731 415 REA---YQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQKLIFLDTAEGVATTIRPY 491 (591)
Q Consensus 415 ~ei---l~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki~~~~~~~~~~~~l~~~ 491 (591)
..+ ++.+.+.--...+........ +|+.... +++. ......+...
T Consensus 693 ~~v~~ile~~~eRtPGS~IE~K~~SLa---------wHYR~AD------pe~g-----------------~~qA~el~~~ 740 (934)
T PLN03064 693 DSVKHVFEYFTERTPRSHFETRETSLV---------WNYKYAD------VEFG-----------------RLQARDMLQH 740 (934)
T ss_pred HHHHHHHHHHHhcCCCcEEEEcCcEEE---------EEecCCC------hhhH-----------------HHHHHHHHHH
Confidence 444 333333221122222221111 1111000 0000 0011223333
Q ss_pred H-HHhccC-CeEEEEecCCeeeecCCCCCHHHHHHHHHHHc------CCCCCcEEEEecChh-hHHHHHHC
Q 007731 492 W-SEATKD-RANVVQAIPDMLEIVPPGTSKGSGVKMLLDHL------GVSTKEIMAIGDGEN-DVEMLELA 553 (591)
Q Consensus 492 l-~~~~~~-~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~l------gI~~eeviafGDs~N-Di~Mlk~a 553 (591)
+ ...... .+. +..|...+||.|.++|||.|++.+++++ +-+++.|+|+||+.. |.+||+..
T Consensus 741 L~~~~~~~~~v~-V~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~GDd~~~DEdmF~~l 810 (934)
T PLN03064 741 LWTGPISNAAVD-VVQGSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTFF 810 (934)
T ss_pred HHhhhccCCCcE-EEeCCeEEEEEcCCCCHHHHHHHHHHhhhhccccCCCCCEEEEeCCCCCCcHHHHHHH
Confidence 3 211111 233 4567789999999999999999999975 235789999999875 99999985
No 45
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=99.56 E-value=7.5e-15 Score=133.71 Aligned_cols=71 Identities=21% Similarity=0.335 Sum_probs=61.7
Q ss_pred CHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecCCcHHHHhhcceecCCCChHH-HHHHHHH
Q 007731 518 SKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSNGSEKAKAVANVIGASNDEDG-VADAIYR 588 (591)
Q Consensus 518 sKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s~~edG-Va~~L~~ 588 (591)
+|-.+...|++++++.+++|.++||+.||+++|+.+|.++|+.+|++++++.|+||+..+...| |.++++-
T Consensus 83 dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dl 154 (170)
T COG1778 83 DKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDL 154 (170)
T ss_pred hHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHH
Confidence 3556777899999999999999999999999999999999999999999999999998776555 5555543
No 46
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=99.53 E-value=1.1e-13 Score=139.12 Aligned_cols=212 Identities=19% Similarity=0.213 Sum_probs=100.7
Q ss_pred EEecCCCccCCCC-----CCCHHHHHHHHHHHhcC-CeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEE
Q 007731 323 FCDMDGTLLNSQS-----KISLTTAKALKEALSRG-LKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLV 396 (591)
Q Consensus 323 ~fDLDGTLld~~~-----~is~~~~eaL~~L~~~G-i~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I 396 (591)
++|+||||.+... .++++.+++|++|.+.. ..|+|+|||+......+....+ .+++++||..+..+|.
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~----i~l~gehG~e~~~~~~-- 74 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPN----IGLAGEHGAEIRRPGG-- 74 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-----EEEEGGGTEEEETTE--
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCC----ceEEEEeeEEeccCcc--
Confidence 6999999997544 57899999999999874 6899999999988555543322 4678887655554433
Q ss_pred EcCCCcEEEe--ecCCHHHHHHHHHHHHhC---CCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccC
Q 007731 397 HGRQGREIFR--RNLDRDFCREAYQYSWEH---KVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVD 471 (591)
Q Consensus 397 ~d~~g~~i~~--~~l~~e~v~eil~~l~~~---~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 471 (591)
..... .....++...+.+.++.. --...+..+..++.. |+....+ .....
T Consensus 75 -----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~---------Hyr~~~~------~~~~~----- 129 (235)
T PF02358_consen 75 -----SEWTNLPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAF---------HYRNAPP------EFGEA----- 129 (235)
T ss_dssp ------EEE-TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEE---------E-TTS-S------T---------
T ss_pred -----ccccccccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEE---------EecCCCc------chhhh-----
Confidence 22221 233445555555554332 111222222222211 1111000 00000
Q ss_pred eeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCC---CCcEEEEecChhhHH
Q 007731 472 IQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVS---TKEIMAIGDGENDVE 548 (591)
Q Consensus 472 i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~---~eeviafGDs~NDi~ 548 (591)
........+.+.+.... .+. +..+...+||.|.+++||.|++++++.++.. .+-++++||+.+|.+
T Consensus 130 --------~~~~l~~~l~~~~~~~~--~~~-v~~g~~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~ 198 (235)
T PF02358_consen 130 --------QARELAEQLREILASHP--GLE-VVPGKKVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDED 198 (235)
T ss_dssp --------THHHHHHHHHHHHHHH---T-E-EEE-SSEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHH
T ss_pred --------HHHHHHHHHHHHHHhCC--CEE-EEECCCEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHH
Confidence 00111222222222211 133 4566789999999999999999999999865 678999999999999
Q ss_pred HHHHC------CceEEecCCc-HHHHhhcceecCC
Q 007731 549 MLELA------SLGIALSNGS-EKAKAVANVIGAS 576 (591)
Q Consensus 549 Mlk~a------g~gVAmgNA~-~elk~~Ad~Vt~s 576 (591)
||+.+ |+++.|+... .+..-.|+|-..+
T Consensus 199 ~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 199 AFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp HHHTTTTS----EEEEES-----------------
T ss_pred HHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 99984 5678887764 4444556665443
No 47
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=99.50 E-value=2.6e-12 Score=129.97 Aligned_cols=204 Identities=20% Similarity=0.248 Sum_probs=127.1
Q ss_pred cccCCCceEEEEecCCCccCCC-----CCCCHHHHHHHHHHHhc-CCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCC
Q 007731 313 RFYKPKFRYIFCDMDGTLLNSQ-----SKISLTTAKALKEALSR-GLKVVVATGKTRPAVISALKKVDLVGRDGIISEFA 386 (591)
Q Consensus 313 ~~~~~~iKlI~fDLDGTLld~~-----~~is~~~~eaL~~L~~~-Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng 386 (591)
.+...+-+++++|+||||.+.. ..++++.++.|++|..+ ...++|+|||+...+..++.-.++ ++++||
T Consensus 12 ~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i----~l~aeh- 86 (266)
T COG1877 12 PYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGI----GLIAEH- 86 (266)
T ss_pred ccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCc----cEEEec-
Confidence 4445566899999999999743 35789999999999988 568999999999999998874443 667776
Q ss_pred CEEEecCEEEEcCCCcEEEeec--CCHHHHHHHHHHHHhC--CCCEE-EEeCCceeeecCCcccccccccccCCcccccc
Q 007731 387 PGVFIQGLLVHGRQGREIFRRN--LDRDFCREAYQYSWEH--KVPLI-AFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIP 461 (591)
Q Consensus 387 ~~I~~NGA~I~d~~g~~i~~~~--l~~e~v~eil~~l~~~--~i~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (591)
|+++.+.+|+...... -...|..++.+.++.+ ..+.. +...+..+. +|+....+
T Consensus 87 ------Ga~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~---------~Hyr~a~~------ 145 (266)
T COG1877 87 ------GAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVA---------LHYRNAED------ 145 (266)
T ss_pred ------ceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEE---------EeeccCCc------
Confidence 6666555665432221 1222223444444432 22222 222221111 11110000
Q ss_pred cHHHhhcccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEe
Q 007731 462 AIEDLLATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIG 541 (591)
Q Consensus 462 ~l~~~l~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafG 541 (591)
.......+........... --+..+...+|+.|.++|||.+++++++++.....-+++.|
T Consensus 146 -------------------~~~~~~a~~~~~~~~~~~~-~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~~~~~~~aG 205 (266)
T COG1877 146 -------------------DEGAALALAEAATLINELK-LRVTPGKMVVELRPPGVSKGAAIKYIMDELPFDGRFPIFAG 205 (266)
T ss_pred -------------------hhhHHHHHHHHHhcccccc-EEEEeCceEEEEeeCCcchHHHHHHHHhcCCCCCCcceecC
Confidence 0001111111111111111 23566778999999999999999999999977666799999
Q ss_pred cChhhHHHHHHCC----ceEEecCC
Q 007731 542 DGENDVEMLELAS----LGIALSNG 562 (591)
Q Consensus 542 Ds~NDi~Mlk~ag----~gVAmgNA 562 (591)
|+..|..||+.+. ++|-++-+
T Consensus 206 DD~TDE~~F~~v~~~~~~~v~v~~~ 230 (266)
T COG1877 206 DDLTDEDAFAAVNKLDSITVKVGVG 230 (266)
T ss_pred CCCccHHHHHhhccCCCceEEecCC
Confidence 9999999999975 45555544
No 48
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=99.31 E-value=4.8e-11 Score=139.37 Aligned_cols=237 Identities=16% Similarity=0.199 Sum_probs=134.3
Q ss_pred eEEE--EecCCCccCCCCCCCHHHHHHHHHHH---hc-CCeEEEEcCCChhHHHHHHHhcCCC--CCCceeecCCCEEEe
Q 007731 320 RYIF--CDMDGTLLNSQSKISLTTAKALKEAL---SR-GLKVVVATGKTRPAVISALKKVDLV--GRDGIISEFAPGVFI 391 (591)
Q Consensus 320 KlI~--fDLDGTLld~~~~is~~~~eaL~~L~---~~-Gi~vviaTGRs~~~~~~~l~~lgl~--~~d~~I~eng~~I~~ 391 (591)
++++ +|+|+| .+ ..+...+.++.+. .. .+.|+++|||++..+..++...+++ .+|.+||..|..|++
T Consensus 771 ~~~via~D~d~~-~~----~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~vGTeIyy 845 (1050)
T TIGR02468 771 RLFVIAVDCYDD-KD----LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNSGSELYY 845 (1050)
T ss_pred eEEEEEeccCCC-CC----hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCcceec
Confidence 3444 899999 22 2222233333333 12 3899999999999999999999988 899999998777766
Q ss_pred cC-------EEEEcCCCcEEEeecCCHHHHHHHH-HHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccH
Q 007731 392 QG-------LLVHGRQGREIFRRNLDRDFCREAY-QYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAI 463 (591)
Q Consensus 392 NG-------A~I~d~~g~~i~~~~l~~e~v~eil-~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 463 (591)
.+ .+..|..........++.+.++..+ ++..... ... . ........
T Consensus 846 ~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~------~~~-------~-----------~~~~~l~~-- 899 (1050)
T TIGR02468 846 PSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASIN------EKK-------G-----------ENEEQIVE-- 899 (1050)
T ss_pred cCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcc------ccc-------c-----------ccccccee--
Confidence 31 1222211111111223333344322 2221100 000 0 00000000
Q ss_pred HHhhcccCeeEEEEecCh---hhHHHhHHHHHHHhccCCeEEEEecC-CeeeecCCCCCHHHHHHHHHHHcCCCCCcEEE
Q 007731 464 EDLLATVDIQKLIFLDTA---EGVATTIRPYWSEATKDRANVVQAIP-DMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMA 539 (591)
Q Consensus 464 ~~~l~~~~i~ki~~~~~~---~~~~~~l~~~l~~~~~~~~~vv~s~~-~~iEI~p~gvsKg~AL~~L~e~lgI~~eevia 539 (591)
+-.....-.|+.++..+ ....+.+++.+.. .+-.++++.+.+ .+++|+|..+|||.||++|+.++|++++++++
T Consensus 900 -Q~~~~q~~~k~SY~v~d~~~~~~v~elr~~Lr~-~gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~V 977 (1050)
T TIGR02468 900 -EDEESSTDHCYAFKVKDPSKVPPVKELRKLLRI-QGLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAV 977 (1050)
T ss_pred -cChhhCCCceEEEEecCcccCccHHHHHHHHHh-CCCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEE
Confidence 00001122344443111 1123445555543 244577788775 89999999999999999999999999999955
Q ss_pred -EecChh-hHH-HHHHCCceEEecC----CcHHHHhhc-----ce--------e-c-CCCChHHHHHHHHHh
Q 007731 540 -IGDGEN-DVE-MLELASLGIALSN----GSEKAKAVA-----NV--------I-G-ASNDEDGVADAIYRY 589 (591)
Q Consensus 540 -fGDs~N-Di~-Mlk~ag~gVAmgN----A~~elk~~A-----d~--------V-t-~s~~edGVa~~L~~~ 589 (591)
+|||.| |++ |+.....+|.+.. ++.++...- |+ + + ..+..+.|..+|+++
T Consensus 978 faGdSGntD~e~Ll~G~~~tvi~~g~~~~~s~~l~~~~sY~~eDVvp~dspni~~~~~~~~~~di~~aL~~l 1049 (1050)
T TIGR02468 978 FVGESGDTDYEGLLGGLHKTVILKGVVSRGSEQLHANRSYPLDDVVPLDSPNIVQATGGSSSDDISDALKKL 1049 (1050)
T ss_pred EeccCCCCCHHHHhCCceeEEEEecccccchhhhcccCCCcccccccCCCCCeEeecCCCCHHHHHHHHHhc
Confidence 999999 966 5555556888864 444554211 11 1 1 234556677777764
No 49
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=99.28 E-value=4.6e-12 Score=119.36 Aligned_cols=228 Identities=16% Similarity=0.183 Sum_probs=143.8
Q ss_pred eEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEEcC
Q 007731 320 RYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVHGR 399 (591)
Q Consensus 320 KlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~d~ 399 (591)
-++.||.||||......++++..+.|+.++. -+.+.++-|-.+..+.+.+..--+...|+..+|||-..+-+|..+-
T Consensus 12 ~l~lfdvdgtLt~~r~~~~~e~~~~l~~lr~-~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~~yk~gk~~~-- 88 (252)
T KOG3189|consen 12 TLCLFDVDGTLTPPRQKVTPEMLEFLQKLRK-KVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLVAYKGGKLLS-- 88 (252)
T ss_pred eEEEEecCCccccccccCCHHHHHHHHHHhh-heEEEEeecHHHHHHHHHhchhHHhhhcccccCCCeeEeeCCcchh--
Confidence 4899999999999999999999999999755 4888999998776665554222233357777887543333332221
Q ss_pred CCcEEEeecCCHHHHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCeeEEEEec
Q 007731 400 QGREIFRRNLDRDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQKLIFLD 479 (591)
Q Consensus 400 ~g~~i~~~~l~~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki~~~~ 479 (591)
+.-....+..+.+++++.++.++-..+.+-..++.+..+.+..+. ..|....+ +.++. ..+.-++
T Consensus 89 --~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiN------vsPIGR~c-s~EER------~eF~e~D 153 (252)
T KOG3189|consen 89 --KQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMIN------VSPIGRNC-SQEER------NEFEELD 153 (252)
T ss_pred --HHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCcee------cccccccc-CHHHH------HHHHHhh
Confidence 111223466777888887776653222222233333333322211 01110000 00000 0000122
Q ss_pred ChhhHHHhHHHHHHHhccCC-eEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEec----ChhhHHHHHHCC
Q 007731 480 TAEGVATTIRPYWSEATKDR-ANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGD----GENDVEMLELAS 554 (591)
Q Consensus 480 ~~~~~~~~l~~~l~~~~~~~-~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGD----s~NDi~Mlk~ag 554 (591)
+.+...+.+.+.+.+.+.+. +....++.-.+|+.|.|++|-..|+++-+. |. +++.+||| +.||.+.+..-.
T Consensus 154 kk~~iR~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-gf--~~IhFFGDkT~~GGNDyEIf~dpr 230 (252)
T KOG3189|consen 154 KKHKIREKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-GF--DTIHFFGDKTMPGGNDYEIFADPR 230 (252)
T ss_pred hhhhhHHHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc-CC--ceEEEeccccCCCCCcceeeeCCc
Confidence 33444555666677777664 777788888999999999999999998665 55 79999999 789999998754
Q ss_pred -ceEEecCCcHHHHh
Q 007731 555 -LGIALSNGSEKAKA 568 (591)
Q Consensus 555 -~gVAmgNA~~elk~ 568 (591)
+|..|.+..+.++.
T Consensus 231 tiGhsV~~PdDT~~~ 245 (252)
T KOG3189|consen 231 TIGHSVTSPDDTVRI 245 (252)
T ss_pred cccccccCchHHHHH
Confidence 67888887776664
No 50
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.24 E-value=2.4e-10 Score=113.12 Aligned_cols=61 Identities=36% Similarity=0.585 Sum_probs=55.4
Q ss_pred CCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecCCcHHHHhhcceecCCCC
Q 007731 517 TSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSNGSEKAKAVANVIGASND 578 (591)
Q Consensus 517 vsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s~~ 578 (591)
.+|+..++.+++++++++++|++||||.||+++++.+|+++++ |+.+.+++.|++++.+.+
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~-~~~~~~~~~a~~~i~~~~ 211 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAF-NAKPKLQQKADICINKKD 211 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe-CCCHHHHHhchhccCCCC
Confidence 4589999999999999999999999999999999999999998 678889999999886655
No 51
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.22 E-value=2.1e-11 Score=120.52 Aligned_cols=64 Identities=36% Similarity=0.458 Sum_probs=55.9
Q ss_pred ecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecCCcHHHHhhcceecCC
Q 007731 512 IVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSNGSEKAKAVANVIGAS 576 (591)
Q Consensus 512 I~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s 576 (591)
..-.+-.|..+++.+++.+|+++++++++|||.||++||+.+|.+|++ |+.+++++.|+.....
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~-n~~~~l~~~a~~~~~~ 201 (212)
T COG0560 138 PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAV-NPKPKLRALADVRIWP 201 (212)
T ss_pred eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEe-CcCHHHHHHHHHhcCh
Confidence 344456899999999999999999999999999999999999999999 7888888888765443
No 52
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.18 E-value=1.6e-10 Score=114.03 Aligned_cols=111 Identities=13% Similarity=0.067 Sum_probs=71.0
Q ss_pred ccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHH
Q 007731 469 TVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVE 548 (591)
Q Consensus 469 ~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~ 548 (591)
...+...++++..........+.+. +...+..+.+. +.+..+..|+..+.++++++|++++++++|||+.+|+.
T Consensus 96 ~~g~~~~i~S~~~~~~~~~~l~~~g--l~~~f~~i~~~----~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~ 169 (214)
T PRK13288 96 KQGYKLGIVTTKMRDTVEMGLKLTG--LDEFFDVVITL----DDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDIL 169 (214)
T ss_pred HCCCeEEEEeCCCHHHHHHHHHHcC--ChhceeEEEec----CcCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 3456666666665544333333221 22224444433 33455667899999999999999999999999999999
Q ss_pred HHHHCCc-eEEecCC---cHHHH-hhcceecCCCChHHHHHHHH
Q 007731 549 MLELASL-GIALSNG---SEKAK-AVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 549 Mlk~ag~-gVAmgNA---~~elk-~~Ad~Vt~s~~edGVa~~L~ 587 (591)
+.+.+|+ .|.+..+ .+++. ..+++++.+..+ +.+.+.
T Consensus 170 aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~--l~~~i~ 211 (214)
T PRK13288 170 AGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSD--LLAIVG 211 (214)
T ss_pred HHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHH--HHHHHh
Confidence 9999997 4445443 23443 348888766443 454444
No 53
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.14 E-value=2.8e-09 Score=108.04 Aligned_cols=57 Identities=21% Similarity=0.393 Sum_probs=50.9
Q ss_pred ceEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcC---CChhHHHHHHHhcCCC
Q 007731 319 FRYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATG---KTRPAVISALKKVDLV 376 (591)
Q Consensus 319 iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTG---Rs~~~~~~~l~~lgl~ 376 (591)
+|.++||+||||++.+..++ .+.++|++|+++|++|+++|| |+...+...++.+|+.
T Consensus 1 ~~~~~~D~DGtl~~~~~~i~-~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 1 YKGYLIDLDGTMYKGKERIP-EAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CCEEEEeCCCceEcCCeeCc-CHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 47899999999999887776 789999999999999999995 8888888888888874
No 54
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.12 E-value=2.4e-10 Score=113.67 Aligned_cols=108 Identities=22% Similarity=0.279 Sum_probs=74.5
Q ss_pred hhcccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChh
Q 007731 466 LLATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGEN 545 (591)
Q Consensus 466 ~l~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~N 545 (591)
.+....+...++++++....+.+.+.+. +...+.++.++ +-.+....+...+..+++.+|++++++++|||+.+
T Consensus 100 ~L~~~g~~l~i~T~k~~~~~~~~l~~~g--l~~~F~~i~g~----~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~ 173 (220)
T COG0546 100 ALKSAGYKLGIVTNKPERELDILLKALG--LADYFDVIVGG----DDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLN 173 (220)
T ss_pred HHHhCCCeEEEEeCCcHHHHHHHHHHhC--CccccceEEcC----CCCCCCCcCHHHHHHHHHHhCCChhheEEECCCHH
Confidence 3445667777888877766655555432 33445555552 33444556789999999999999779999999999
Q ss_pred hHHHHHHCCc---eEEecCC-cHHHHh-hcceecCCCCh
Q 007731 546 DVEMLELASL---GIALSNG-SEKAKA-VANVIGASNDE 579 (591)
Q Consensus 546 Di~Mlk~ag~---gVAmgNA-~~elk~-~Ad~Vt~s~~e 579 (591)
|+.|.+.||+ +|..|.. ...+.. .+++++.+..+
T Consensus 174 Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~e 212 (220)
T COG0546 174 DILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAE 212 (220)
T ss_pred HHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHH
Confidence 9999999994 4555432 344444 48888866543
No 55
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.11 E-value=3.2e-10 Score=116.49 Aligned_cols=103 Identities=13% Similarity=0.184 Sum_probs=67.8
Q ss_pred ccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHH
Q 007731 469 TVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVE 548 (591)
Q Consensus 469 ~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~ 548 (591)
...+...++++.+......+.+.+. +...+..+.++ +.++.+..|...++.+++++|+++++|++|||+.||++
T Consensus 115 ~~g~~l~ivTn~~~~~~~~~l~~~~--i~~~f~~i~~~----d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~ 188 (272)
T PRK13223 115 KQGVEMALITNKPERFVAPLLDQMK--IGRYFRWIIGG----DTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVL 188 (272)
T ss_pred HCCCeEEEEECCcHHHHHHHHHHcC--cHhhCeEEEec----CCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHH
Confidence 3456666666665543333332211 12224444444 23455677889999999999999999999999999999
Q ss_pred HHHHCCc-eEEecCC---cHHHH-hhcceecCCC
Q 007731 549 MLELASL-GIALSNG---SEKAK-AVANVIGASN 577 (591)
Q Consensus 549 Mlk~ag~-gVAmgNA---~~elk-~~Ad~Vt~s~ 577 (591)
+.+.+|+ ++.|.++ ...++ ..+++++.+.
T Consensus 189 aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l 222 (272)
T PRK13223 189 AAKAAGVQCVALSYGYNHGRPIAEESPALVIDDL 222 (272)
T ss_pred HHHHCCCeEEEEecCCCCchhhhhcCCCEEECCH
Confidence 9999997 5555443 33333 3577777543
No 56
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.10 E-value=5.9e-10 Score=99.88 Aligned_cols=55 Identities=36% Similarity=0.593 Sum_probs=49.9
Q ss_pred EEEEecCCCccCCCC--------CCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 321 YIFCDMDGTLLNSQS--------KISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 321 lI~fDLDGTLld~~~--------~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
+++||+||||++... .+.+...+.|++++++|+.++++||+....+...++.+++
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~ 63 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGL 63 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCC
Confidence 489999999999875 7889999999999999999999999999999888887765
No 57
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.10 E-value=2.9e-09 Score=108.52 Aligned_cols=57 Identities=21% Similarity=0.346 Sum_probs=48.4
Q ss_pred ceEEEEecCCCccCCCCC---CCHHHHHHHHHHHhcCCeEEEEcCCChhH---HHHHHHhcCC
Q 007731 319 FRYIFCDMDGTLLNSQSK---ISLTTAKALKEALSRGLKVVVATGKTRPA---VISALKKVDL 375 (591)
Q Consensus 319 iKlI~fDLDGTLld~~~~---is~~~~eaL~~L~~~Gi~vviaTGRs~~~---~~~~l~~lgl 375 (591)
+|+|+||+||||++.+.. +.+.+.++|++|+++|++++++|||+... +...+..+|+
T Consensus 1 ~k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~ 63 (257)
T TIGR01458 1 VKGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGF 63 (257)
T ss_pred CCEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCC
Confidence 479999999999987662 77899999999999999999999987764 5566677776
No 58
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=99.10 E-value=3.2e-10 Score=106.85 Aligned_cols=101 Identities=18% Similarity=0.219 Sum_probs=76.8
Q ss_pred EEEEecCCCccCCC-----------CCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHH---HHHHhc-----CCCCCCce
Q 007731 321 YIFCDMDGTLLNSQ-----------SKISLTTAKALKEALSRGLKVVVATGKTRPAVI---SALKKV-----DLVGRDGI 381 (591)
Q Consensus 321 lI~fDLDGTLld~~-----------~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~---~~l~~l-----gl~~~d~~ 381 (591)
+|+||+||||++++ ..+++.+.+++++++++|++|+++|||+...+. .++..+ +++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp----- 75 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLP----- 75 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCC-----
Confidence 48999999999988 688999999999999999999999999988764 666652 231
Q ss_pred eecCCCEEEecCEEEEcCCCcEEEeec--CCHHHHHHHHHHHHhCCCCEE
Q 007731 382 ISEFAPGVFIQGLLVHGRQGREIFRRN--LDRDFCREAYQYSWEHKVPLI 429 (591)
Q Consensus 382 I~eng~~I~~NGA~I~d~~g~~i~~~~--l~~e~v~eil~~l~~~~i~~~ 429 (591)
.|+.++.||+.+++..++.+...+ ++.+.+..+.+.+.+.+.++.
T Consensus 76 ---~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~ 122 (157)
T smart00775 76 ---HGPVLLSPDRLFAALHREVISKKPEVFKIACLRDIKSLFPPQGNPFY 122 (157)
T ss_pred ---CceEEEcCCcchhhhhcccccCCHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 256777889888765556666555 556667777766655555554
No 59
>PRK10671 copA copper exporting ATPase; Provisional
Probab=99.07 E-value=4.9e-10 Score=132.09 Aligned_cols=236 Identities=18% Similarity=0.232 Sum_probs=131.5
Q ss_pred CCceEEEEecCCCccCCCCCC---------CHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHh---cCCCC--CCcee
Q 007731 317 PKFRYIFCDMDGTLLNSQSKI---------SLTTAKALKEALSRGLKVVVATGKTRPAVISALKK---VDLVG--RDGII 382 (591)
Q Consensus 317 ~~iKlI~fDLDGTLld~~~~i---------s~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~---lgl~~--~d~~I 382 (591)
.+++.|+||-+|||+.....+ ++. +.+..+ ..+.+++..+....+++. ..+.. ....+
T Consensus 515 ~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~~~--~~l~~a------~~~e~~s~hp~a~Ai~~~~~~~~~~~~~~~~~~ 586 (834)
T PRK10671 515 STLDTLVFDKTGTLTEGKPQVVAVKTFNGVDEA--QALRLA------AALEQGSSHPLARAILDKAGDMTLPQVNGFRTL 586 (834)
T ss_pred cCCCEEEEcCCCccccCceEEEEEEccCCCCHH--HHHHHH------HHHhCCCCCHHHHHHHHHHhhCCCCCcccceEe
Confidence 357899999999999765432 222 122211 123455655554444332 11110 01111
Q ss_pred ecCCCEEEecCEEEEcCCCcEEEeecCCHHHHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCc-ccccc
Q 007731 383 SEFAPGVFIQGLLVHGRQGREIFRRNLDRDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPK-AEIIP 461 (591)
Q Consensus 383 ~eng~~I~~NGA~I~d~~g~~i~~~~l~~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 461 (591)
...|-...+||..++-.+.+.+....+..+.+.+.++.+.+.+.....+..++.+.-.. . ...+. .....
T Consensus 587 ~g~Gv~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~va~~~~~~g~~--------~-l~d~~r~~a~~ 657 (834)
T PRK10671 587 RGLGVSGEAEGHALLLGNQALLNEQQVDTKALEAEITAQASQGATPVLLAVDGKAAALL--------A-IRDPLRSDSVA 657 (834)
T ss_pred cceEEEEEECCEEEEEeCHHHHHHcCCChHHHHHHHHHHHhCCCeEEEEEECCEEEEEE--------E-ccCcchhhHHH
Confidence 11121223456555422222222233443444555555556665544444333221100 0 00011 11111
Q ss_pred cHHHhhcccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEe
Q 007731 462 AIEDLLATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIG 541 (591)
Q Consensus 462 ~l~~~l~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafG 541 (591)
.+ +.+....+...+++.+.....+.+.+.+ + +.- .+.++.|. +|..+++.+.+ ..+++++||
T Consensus 658 ~i-~~L~~~gi~v~~~Tgd~~~~a~~ia~~l----g--i~~-----~~~~~~p~--~K~~~i~~l~~----~~~~v~~vG 719 (834)
T PRK10671 658 AL-QRLHKAGYRLVMLTGDNPTTANAIAKEA----G--IDE-----VIAGVLPD--GKAEAIKRLQS----QGRQVAMVG 719 (834)
T ss_pred HH-HHHHHCCCeEEEEcCCCHHHHHHHHHHc----C--CCE-----EEeCCCHH--HHHHHHHHHhh----cCCEEEEEe
Confidence 22 2234456666677777766555444432 2 111 12234454 58888877654 357899999
Q ss_pred cChhhHHHHHHCCceEEecCCcHHHHhhcceecCCCChHHHHHHHH
Q 007731 542 DGENDVEMLELASLGIALSNGSEKAKAVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 542 Ds~NDi~Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~ 587 (591)
|+.||++|++.||+||+|+|+.+..++.||++...++-.++.++++
T Consensus 720 Dg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 720 DGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALA 765 (834)
T ss_pred CCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999986
No 60
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.05 E-value=3.7e-09 Score=102.74 Aligned_cols=45 Identities=38% Similarity=0.609 Sum_probs=41.8
Q ss_pred CCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecC
Q 007731 517 TSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSN 561 (591)
Q Consensus 517 vsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgN 561 (591)
.+|+.+++.+++++|++++++++||||.||++|++.+|+++++..
T Consensus 146 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~ 190 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGD 190 (201)
T ss_pred ccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECC
Confidence 368899999999999999999999999999999999999999954
No 61
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.03 E-value=1e-09 Score=112.72 Aligned_cols=111 Identities=18% Similarity=0.173 Sum_probs=70.9
Q ss_pred cccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhH
Q 007731 468 ATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDV 547 (591)
Q Consensus 468 ~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi 547 (591)
....+...++++........+.+.+. +...+..+.++.. ...|..++..+++++++++++|++|||+.+|+
T Consensus 155 ~~~gi~laIvSn~~~~~~~~~L~~~g--l~~~F~~vi~~~~-------~~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di 225 (273)
T PRK13225 155 RSRSLCLGILSSNSRQNIEAFLQRQG--LRSLFSVVQAGTP-------ILSKRRALSQLVAREGWQPAAVMYVGDETRDV 225 (273)
T ss_pred HHCCCeEEEEeCCCHHHHHHHHHHcC--ChhheEEEEecCC-------CCCCHHHHHHHHHHhCcChhHEEEECCCHHHH
Confidence 34456666677666555444433321 2223444433321 12578999999999999999999999999999
Q ss_pred HHHHHCCc-eEEecCC---cHHHHh-hcceecCCCChHHHHHHHHHh
Q 007731 548 EMLELASL-GIALSNG---SEKAKA-VANVIGASNDEDGVADAIYRY 589 (591)
Q Consensus 548 ~Mlk~ag~-gVAmgNA---~~elk~-~Ad~Vt~s~~edGVa~~L~~~ 589 (591)
.+.+.+|+ +|.+.++ .+++.+ .+++++.+..+ +...+.++
T Consensus 226 ~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~e--L~~~~~~~ 270 (273)
T PRK13225 226 EAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSD--LLQAVTQL 270 (273)
T ss_pred HHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHH--HHHHHHHH
Confidence 99999996 4444432 334543 58888866543 55555443
No 62
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.03 E-value=1e-08 Score=105.69 Aligned_cols=56 Identities=13% Similarity=0.189 Sum_probs=45.3
Q ss_pred ceEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChh---HHHHHHHhcCC
Q 007731 319 FRYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRP---AVISALKKVDL 375 (591)
Q Consensus 319 iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~---~~~~~l~~lgl 375 (591)
||+|+||+||||++.+..++ .+.++|++|+++|++++++|+|+.. .....++.+|+
T Consensus 2 ~~~~~~D~DGtl~~~~~~~~-ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~ 60 (279)
T TIGR01452 2 AQGFIFDCDGVLWLGERVVP-GAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGF 60 (279)
T ss_pred ccEEEEeCCCceEcCCeeCc-CHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 68999999999999766554 4899999999999999999998754 33345566665
No 63
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.02 E-value=1.2e-09 Score=108.20 Aligned_cols=111 Identities=14% Similarity=0.199 Sum_probs=69.8
Q ss_pred ccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHH
Q 007731 469 TVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVE 548 (591)
Q Consensus 469 ~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~ 548 (591)
...+...++++........+.+.+. +...+..+.+.. -......|+.+++.++++++++++++++|||+.||++
T Consensus 107 ~~g~~~~i~S~~~~~~~~~~l~~~~--l~~~f~~~~~~~----~~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~ 180 (226)
T PRK13222 107 AAGYPLAVVTNKPTPFVAPLLEALG--IADYFSVVIGGD----SLPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQ 180 (226)
T ss_pred HCCCeEEEEeCCCHHHHHHHHHHcC--CccCccEEEcCC----CCCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHH
Confidence 3456666666665544333333221 222233343332 2223455788999999999999999999999999999
Q ss_pred HHHHCCc-eEEecCCc---HHH-HhhcceecCCCChHHHHHHHH
Q 007731 549 MLELASL-GIALSNGS---EKA-KAVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 549 Mlk~ag~-gVAmgNA~---~el-k~~Ad~Vt~s~~edGVa~~L~ 587 (591)
+++.+|+ +|.|.++. .++ ...+++++.+..+ +..+|+
T Consensus 181 ~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~--l~~~l~ 222 (226)
T PRK13222 181 AARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAE--LLPLLG 222 (226)
T ss_pred HHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHH--HHHHHH
Confidence 9999997 66665432 233 3357787766543 444443
No 64
>PRK10444 UMP phosphatase; Provisional
Probab=99.01 E-value=8e-09 Score=104.67 Aligned_cols=56 Identities=21% Similarity=0.386 Sum_probs=47.7
Q ss_pred ceEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHH---hcCC
Q 007731 319 FRYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALK---KVDL 375 (591)
Q Consensus 319 iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~---~lgl 375 (591)
||+++||+||||++.+ .+.+.+.++|+.|+++|.+++++|+|+......+.+ .+|+
T Consensus 1 ~~~v~~DlDGtL~~~~-~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 1 IKNVICDIDGVLMHDN-VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CcEEEEeCCCceEeCC-eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 6899999999999987 678899999999999999999999999876655544 4555
No 65
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.00 E-value=1.1e-09 Score=109.48 Aligned_cols=103 Identities=17% Similarity=0.186 Sum_probs=64.0
Q ss_pred ccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHH
Q 007731 469 TVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVE 548 (591)
Q Consensus 469 ~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~ 548 (591)
...+...++++........+.+.+. +...+.++.++. -+.....+...+..+++++|+++++|++|||+.+|+.
T Consensus 109 ~~g~~l~i~Tn~~~~~~~~~l~~~~--l~~~f~~i~~~~----~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~ 182 (229)
T PRK13226 109 CAGCVWGIVTNKPEYLARLILPQLG--WEQRCAVLIGGD----TLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDIL 182 (229)
T ss_pred HCCCeEEEECCCCHHHHHHHHHHcC--chhcccEEEecC----cCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHH
Confidence 3445445555555443333333221 122234444432 2334566788999999999999999999999999999
Q ss_pred HHHHCCc-eEEecCC----cHHH-HhhcceecCCC
Q 007731 549 MLELASL-GIALSNG----SEKA-KAVANVIGASN 577 (591)
Q Consensus 549 Mlk~ag~-gVAmgNA----~~el-k~~Ad~Vt~s~ 577 (591)
+.+.+|+ .|++..+ .... ...+++++.+.
T Consensus 183 aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~ 217 (229)
T PRK13226 183 AARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQP 217 (229)
T ss_pred HHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCH
Confidence 9999996 4444332 1223 23488887654
No 66
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=98.98 E-value=5.5e-09 Score=105.82 Aligned_cols=115 Identities=11% Similarity=0.049 Sum_probs=75.9
Q ss_pred cccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhH
Q 007731 468 ATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDV 547 (591)
Q Consensus 468 ~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi 547 (591)
....+...++++..........+.+. +...++.+.++. -+..+..+...+..+++++|+++++|++|||+.+|+
T Consensus 121 ~~~g~~l~I~Tn~~~~~~~~~l~~~g--l~~~Fd~iv~~~----~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di 194 (248)
T PLN02770 121 EDRGLKRAAVTNAPRENAELMISLLG--LSDFFQAVIIGS----ECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGI 194 (248)
T ss_pred HHcCCeEEEEeCCCHHHHHHHHHHcC--ChhhCcEEEecC----cCCCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHH
Confidence 34456666666666554443333321 222344444443 223456778999999999999999999999999999
Q ss_pred HHHHHCCc-eEEec--CCcHHHH-hhcceecCCCChHHHHHHHHH
Q 007731 548 EMLELASL-GIALS--NGSEKAK-AVANVIGASNDEDGVADAIYR 588 (591)
Q Consensus 548 ~Mlk~ag~-gVAmg--NA~~elk-~~Ad~Vt~s~~edGVa~~L~~ 588 (591)
.+.+.+|+ .|.+. +..+.+. ..+++++.+..+-.+...|+.
T Consensus 195 ~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~~~~~~~~~ 239 (248)
T PLN02770 195 KAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDPKLWAALEE 239 (248)
T ss_pred HHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhhHHHHHHhh
Confidence 99999996 44443 3333343 358888888877666666654
No 67
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=98.97 E-value=2.9e-09 Score=105.69 Aligned_cols=102 Identities=15% Similarity=0.112 Sum_probs=64.6
Q ss_pred ccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHH
Q 007731 469 TVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVE 548 (591)
Q Consensus 469 ~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~ 548 (591)
...+...++++........+.+.+. +...+..+.++ +....+..++..++.+++.+|+++++|++|||+.||++
T Consensus 106 ~~g~~~~i~S~~~~~~~~~~l~~~~--l~~~f~~~~~~----~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~ 179 (222)
T PRK10826 106 AQGLKIGLASASPLHMLEAVLTMFD--LRDYFDALASA----EKLPYSKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMI 179 (222)
T ss_pred HCCCeEEEEeCCcHHHHHHHHHhCc--chhcccEEEEc----ccCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCChhhHH
Confidence 3455556666655444333333321 22234444443 23345567788999999999999999999999999999
Q ss_pred HHHHCCce-EEecCCc--H-HHHhhcceecCC
Q 007731 549 MLELASLG-IALSNGS--E-KAKAVANVIGAS 576 (591)
Q Consensus 549 Mlk~ag~g-VAmgNA~--~-elk~~Ad~Vt~s 576 (591)
+.+.+|+. |.+.... + .....+++++.+
T Consensus 180 aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~ 211 (222)
T PRK10826 180 AAKAARMRSIVVPAPEQQNDPRWALADVKLES 211 (222)
T ss_pred HHHHcCCEEEEecCCccCchhhhhhhheeccC
Confidence 99999974 4443321 2 223357776655
No 68
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=98.96 E-value=2.2e-08 Score=102.45 Aligned_cols=88 Identities=14% Similarity=0.032 Sum_probs=55.8
Q ss_pred cccCeeEEEEecChhhHHHhHHHHHHHhccCC-eEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCC-CCcEEEEecChh
Q 007731 468 ATVDIQKLIFLDTAEGVATTIRPYWSEATKDR-ANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVS-TKEIMAIGDGEN 545 (591)
Q Consensus 468 ~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~-~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~-~eeviafGDs~N 545 (591)
....+...++++........+.+.+. +.+. ...+.+.. -+.....+...+..+++++|+. +++|++|||+.+
T Consensus 114 ~~~g~~l~I~T~~~~~~~~~~l~~~~--l~~~~~d~i~~~~----~~~~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~ 187 (267)
T PRK13478 114 RARGIKIGSTTGYTREMMDVVVPLAA--AQGYRPDHVVTTD----DVPAGRPYPWMALKNAIELGVYDVAACVKVDDTVP 187 (267)
T ss_pred HHCCCEEEEEcCCcHHHHHHHHHHHh--hcCCCceEEEcCC----cCCCCCCChHHHHHHHHHcCCCCCcceEEEcCcHH
Confidence 34456666666665544333333221 1111 23333332 2233445678999999999996 699999999999
Q ss_pred hHHHHHHCCc-eEEecC
Q 007731 546 DVEMLELASL-GIALSN 561 (591)
Q Consensus 546 Di~Mlk~ag~-gVAmgN 561 (591)
|+.+.+.+|+ +|++..
T Consensus 188 Di~aA~~aG~~~i~v~~ 204 (267)
T PRK13478 188 GIEEGLNAGMWTVGVIL 204 (267)
T ss_pred HHHHHHHCCCEEEEEcc
Confidence 9999999996 455544
No 69
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=98.96 E-value=1.5e-09 Score=105.62 Aligned_cols=207 Identities=17% Similarity=0.160 Sum_probs=121.2
Q ss_pred HHHHHHHHhcCCeEEEEcCCChhHHHHHHH-hcCCCCCCceeecCCCEEEecCEEEEcCCCcEEEeecCCHHHHHHHHHH
Q 007731 342 AKALKEALSRGLKVVVATGKTRPAVISALK-KVDLVGRDGIISEFAPGVFIQGLLVHGRQGREIFRRNLDRDFCREAYQY 420 (591)
Q Consensus 342 ~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~-~lgl~~~d~~I~eng~~I~~NGA~I~d~~g~~i~~~~l~~e~v~eil~~ 420 (591)
.+.|++|++ .+.|++++|-.+..+.+.+. .--+...+++..+||...+-+|..+. +..+...+..+..++++.+
T Consensus 2 ~~~L~~L~~-~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~----~~~~~~~lgee~~~~~in~ 76 (220)
T PF03332_consen 2 AELLQKLRK-KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIW----SQSIAEFLGEEKLQKLINF 76 (220)
T ss_dssp HHHHHHHHT-TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEE----E--HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchh----hHhHHHHcCHHHHHHHHHH
Confidence 567777765 59999999999887776663 21122346777887766666555444 1223445667777777776
Q ss_pred HHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCeeEEEEecChhhHHHhHHHHHHHhccC-C
Q 007731 421 SWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQKLIFLDTAEGVATTIRPYWSEATKD-R 499 (591)
Q Consensus 421 l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~-~ 499 (591)
+.++-..+.+-...+.+..+.+..+ ...+.-..+ +..+-..... +++.....+.+.+.+.+.+.+ .
T Consensus 77 ~l~~~~~l~lp~krGtfIE~R~gmI------n~SpiGr~a-~~eer~~f~~------~D~~~~iR~~~v~~L~~~f~d~~ 143 (220)
T PF03332_consen 77 CLRYISDLDLPVKRGTFIEFRGGMI------NFSPIGRNA-SQEERDEFDE------YDKKHKIREKLVEALKKEFPDFG 143 (220)
T ss_dssp HHHHHHT---S---S-SEEEESSEE------EE-SS-TTS--HHHHHHHHH------HHHHHTHHHHHHHHHHHHTCCCS
T ss_pred HHHHHHhCCCCccCCCceeecCCcE------EECcccCcC-CHHHHHhhhh------cChhhhHHHHHHHHHHHHCCCCc
Confidence 6554111111011111111111110 111111111 1111000000 122344556677788888876 4
Q ss_pred eEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEec----ChhhHHHHHHCC-ceEEecCCcHHHHhh
Q 007731 500 ANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGD----GENDVEMLELAS-LGIALSNGSEKAKAV 569 (591)
Q Consensus 500 ~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGD----s~NDi~Mlk~ag-~gVAmgNA~~elk~~ 569 (591)
+.+..+|...+||+|.|++|..+|++|.+.. .+++++||| +.||.+.+...+ +|++|.+..+.++.+
T Consensus 144 L~~siGGqiSiDvfp~GwDKty~Lr~l~~~~---~~~I~FfGDkt~pGGNDyei~~~~rt~g~~V~~p~DT~~~l 215 (220)
T PF03332_consen 144 LTFSIGGQISIDVFPKGWDKTYCLRHLEDEG---FDEIHFFGDKTFPGGNDYEIFEDPRTIGHTVTSPEDTIKQL 215 (220)
T ss_dssp EEEEEETTTEEEEEETT-SGGGGGGGTTTTT----SEEEEEESS-STTSTTHHHHHSTTSEEEE-SSHHHHHHHH
T ss_pred eEEecCCceEEccccCCccHHHHHHHHHhcc---cceEEEEehhccCCCCCceeeecCCccEEEeCCHHHHHHHH
Confidence 8889999999999999999999999997654 589999999 789999999876 599998877766643
No 70
>PRK11587 putative phosphatase; Provisional
Probab=98.92 E-value=5.7e-09 Score=103.43 Aligned_cols=63 Identities=16% Similarity=0.124 Sum_probs=48.7
Q ss_pred CCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCc-eEEecCCcHHH-HhhcceecCCC
Q 007731 515 PGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASL-GIALSNGSEKA-KAVANVIGASN 577 (591)
Q Consensus 515 ~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~-gVAmgNA~~el-k~~Ad~Vt~s~ 577 (591)
....+...+..+++++|+++++|++|||+.+|+.+.+.+|+ +|++.++.... ...+++++.+.
T Consensus 136 ~~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~ 200 (218)
T PRK11587 136 RGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHSL 200 (218)
T ss_pred CCCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecch
Confidence 34566788999999999999999999999999999999997 67776554222 23466666543
No 71
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=98.91 E-value=1.7e-08 Score=102.41 Aligned_cols=89 Identities=16% Similarity=0.068 Sum_probs=58.3
Q ss_pred cccCeeEEEEecChhhHHHhHHHHHHHhccCCe-EEEEecCCeeeecCCCCCHHHHHHHHHHHcCCC-CCcEEEEecChh
Q 007731 468 ATVDIQKLIFLDTAEGVATTIRPYWSEATKDRA-NVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVS-TKEIMAIGDGEN 545 (591)
Q Consensus 468 ~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~-~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~-~eeviafGDs~N 545 (591)
....+...++++........+.+.+. +...+ ..+.++. -+..+..+...+..+++++|+. +++|++|||+.+
T Consensus 112 ~~~g~~l~IvT~~~~~~~~~~l~~~g--l~~~f~d~ii~~~----~~~~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~ 185 (253)
T TIGR01422 112 RARGIKIGSTTGYTREMMDVVAPEAA--LQGYRPDYNVTTD----DVPAGRPAPWMALKNAIELGVYDVAACVKVGDTVP 185 (253)
T ss_pred HHCCCeEEEECCCcHHHHHHHHHHHH--hcCCCCceEEccc----cCCCCCCCHHHHHHHHHHcCCCCchheEEECCcHH
Confidence 34456666666666554444433332 12222 3444432 2334456788999999999995 899999999999
Q ss_pred hHHHHHHCCc-eEEecCC
Q 007731 546 DVEMLELASL-GIALSNG 562 (591)
Q Consensus 546 Di~Mlk~ag~-gVAmgNA 562 (591)
|+.+.+.+|+ .|++.++
T Consensus 186 Di~aA~~aGi~~i~v~~g 203 (253)
T TIGR01422 186 DIEEGRNAGMWTVGLILS 203 (253)
T ss_pred HHHHHHHCCCeEEEEecC
Confidence 9999999996 5555443
No 72
>PLN02645 phosphoglycolate phosphatase
Probab=98.91 E-value=2.6e-08 Score=104.29 Aligned_cols=57 Identities=18% Similarity=0.242 Sum_probs=47.2
Q ss_pred CceEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHH---HHhcCC
Q 007731 318 KFRYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISA---LKKVDL 375 (591)
Q Consensus 318 ~iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~---l~~lgl 375 (591)
++|+++||+||||++.+. +.+...++|+.++++|.+++++|+|+......+ ++.+|+
T Consensus 27 ~~~~~~~D~DGtl~~~~~-~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 27 SVETFIFDCDGVIWKGDK-LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred hCCEEEEeCcCCeEeCCc-cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 579999999999999765 557789999999999999999999995554444 456665
No 73
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=98.89 E-value=1.1e-08 Score=104.51 Aligned_cols=106 Identities=12% Similarity=0.087 Sum_probs=68.2
Q ss_pred cccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhH
Q 007731 468 ATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDV 547 (591)
Q Consensus 468 ~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi 547 (591)
....+...++++........+.+.+. +...+..+.++. -+..+..+...+..+++++|+++++|++|||+.+|+
T Consensus 122 ~~~g~~l~I~Tn~~~~~~~~~l~~~g--l~~~Fd~ii~~~----d~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di 195 (260)
T PLN03243 122 KKHEIPIAVASTRPRRYLERAIEAVG--MEGFFSVVLAAE----DVYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSV 195 (260)
T ss_pred HHCCCEEEEEeCcCHHHHHHHHHHcC--CHhhCcEEEecc----cCCCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHH
Confidence 33456666667666554443333321 222344455443 223345678899999999999999999999999999
Q ss_pred HHHHHCCc-eEEecC-CcHHHHhhcceecCCCCh
Q 007731 548 EMLELASL-GIALSN-GSEKAKAVANVIGASNDE 579 (591)
Q Consensus 548 ~Mlk~ag~-gVAmgN-A~~elk~~Ad~Vt~s~~e 579 (591)
.+.+.+|+ .|++.+ ........+++++.+..+
T Consensus 196 ~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~e 229 (260)
T PLN03243 196 EAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDD 229 (260)
T ss_pred HHHHHcCCEEEEEecCCchhhhccCCEEeCCHHH
Confidence 99999997 444432 222222347887766543
No 74
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.88 E-value=7.5e-09 Score=101.22 Aligned_cols=67 Identities=25% Similarity=0.249 Sum_probs=45.2
Q ss_pred CCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecCCcHHHHhhcce-ecCCCChHHHHHHHHHh
Q 007731 517 TSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSNGSEKAKAVANV-IGASNDEDGVADAIYRY 589 (591)
Q Consensus 517 vsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgNA~~elk~~Ad~-Vt~s~~edGVa~~L~~~ 589 (591)
..|...++. ++...+++++||||.||++|++.+|.|++++.........+++ +..+.. .+.+.|.++
T Consensus 131 ~~k~~~l~~----~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~~~~~--el~~~l~~~ 198 (205)
T PRK13582 131 DGKRQAVKA----LKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAVHTYD--ELLAAIDKA 198 (205)
T ss_pred chHHHHHHH----HHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCcccccCCHH--HHHHHHHHH
Confidence 345555543 3444579999999999999999999999886544333344555 555543 366666665
No 75
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=98.88 E-value=1.5e-08 Score=107.97 Aligned_cols=111 Identities=14% Similarity=0.122 Sum_probs=73.0
Q ss_pred hhcccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChh
Q 007731 466 LLATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGEN 545 (591)
Q Consensus 466 ~l~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~N 545 (591)
.+....+...++++........+.+.+. +...++.+.+... +..+..+...+..+++++|+++++|++|||+.+
T Consensus 227 ~Lk~~GiklaIaSn~~~~~~~~~L~~lg--L~~yFd~Iv~sdd----v~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~ 300 (381)
T PLN02575 227 VLMNYKIPMALVSTRPRKTLENAIGSIG--IRGFFSVIVAAED----VYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQ 300 (381)
T ss_pred HHHHCCCeEEEEeCCCHHHHHHHHHHcC--CHHHceEEEecCc----CCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHH
Confidence 3344566666677666554444433321 2233555555432 234566789999999999999999999999999
Q ss_pred hHHHHHHCCc-eEEecCCcHHHH-hhcceecCCCChHHH
Q 007731 546 DVEMLELASL-GIALSNGSEKAK-AVANVIGASNDEDGV 582 (591)
Q Consensus 546 Di~Mlk~ag~-gVAmgNA~~elk-~~Ad~Vt~s~~edGV 582 (591)
|+.+.+.+|+ .|++.+..+..+ ..|++++.+..+-.+
T Consensus 301 DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~ 339 (381)
T PLN02575 301 TVEAAHDARMKCVAVASKHPIYELGAADLVVRRLDELSI 339 (381)
T ss_pred HHHHHHHcCCEEEEECCCCChhHhcCCCEEECCHHHHHH
Confidence 9999999996 556655432221 247888777665433
No 76
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=98.86 E-value=7.1e-09 Score=101.84 Aligned_cols=104 Identities=13% Similarity=0.177 Sum_probs=64.9
Q ss_pred ccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHH
Q 007731 469 TVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVE 548 (591)
Q Consensus 469 ~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~ 548 (591)
...+...++++........+.+.+. +...+..+.++ +.......+...+..+++++|++++++++|||+.+|+.
T Consensus 99 ~~g~~~~i~S~~~~~~~~~~l~~~~--l~~~f~~~~~~----~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~ 172 (213)
T TIGR01449 99 AKGLRLGLVTNKPTPLARPLLELLG--LAKYFSVLIGG----DSLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQ 172 (213)
T ss_pred HCCCeEEEEeCCCHHHHHHHHHHcC--cHhhCcEEEec----CCCCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHH
Confidence 3445555566555444333333321 11223334333 22334456789999999999999999999999999999
Q ss_pred HHHHCCc-eEEecC--C-cHHHH-hhcceecCCCC
Q 007731 549 MLELASL-GIALSN--G-SEKAK-AVANVIGASND 578 (591)
Q Consensus 549 Mlk~ag~-gVAmgN--A-~~elk-~~Ad~Vt~s~~ 578 (591)
+.+.+|+ .+.+.. . ..+++ ..|++++.+..
T Consensus 173 aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~ 207 (213)
T TIGR01449 173 AARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLN 207 (213)
T ss_pred HHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHH
Confidence 9999997 444532 2 23343 35778776543
No 77
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.86 E-value=3.3e-08 Score=97.19 Aligned_cols=68 Identities=22% Similarity=0.239 Sum_probs=51.8
Q ss_pred CCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecCCcHHHHhhcceecCCCChHHHHHHHH
Q 007731 515 PGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSNGSEKAKAVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 515 ~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~ 587 (591)
.+-.|...++.+ +..|. +++++|||.||++|++.||++|++ ++.|.+++.|+-+....+-+-+...|.
T Consensus 129 ~~~~K~~~l~~l-~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~-~ak~~~~~~~~~~~~~~~~~~~~~~~~ 196 (203)
T TIGR02137 129 QKDPKRQSVIAF-KSLYY---RVIAAGDSYNDTTMLSEAHAGILF-HAPENVIREFPQFPAVHTYEDLKREFL 196 (203)
T ss_pred CcchHHHHHHHH-HhhCC---CEEEEeCCHHHHHHHHhCCCCEEe-cCCHHHHHhCCCCCcccCHHHHHHHHH
Confidence 345788888888 45553 899999999999999999999999 678888888876554434344555544
No 78
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=98.85 E-value=2.5e-08 Score=98.74 Aligned_cols=106 Identities=18% Similarity=0.164 Sum_probs=67.4
Q ss_pred cccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCC-CCcEEEEecChhh
Q 007731 468 ATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVS-TKEIMAIGDGEND 546 (591)
Q Consensus 468 ~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~-~eeviafGDs~ND 546 (591)
....+...++++........+.+.+.-.....+..+.+... ...+..+...+..+++++|++ +++|++|||+.+|
T Consensus 100 ~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~----~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~D 175 (220)
T TIGR03351 100 RSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSD----VAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPND 175 (220)
T ss_pred HHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCc----CCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHH
Confidence 34456666777766655544444433111133444444422 223456789999999999997 7999999999999
Q ss_pred HHHHHHCCceE--EecCC---cHHHHh-hcceecCCC
Q 007731 547 VEMLELASLGI--ALSNG---SEKAKA-VANVIGASN 577 (591)
Q Consensus 547 i~Mlk~ag~gV--AmgNA---~~elk~-~Ad~Vt~s~ 577 (591)
+.+.+.+|+.+ ++..+ ..++++ .+++++.+.
T Consensus 176 i~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~ 212 (220)
T TIGR03351 176 LEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSV 212 (220)
T ss_pred HHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCH
Confidence 99999999865 44432 233433 366666543
No 79
>PRK11590 hypothetical protein; Provisional
Probab=98.85 E-value=6.5e-08 Score=95.59 Aligned_cols=95 Identities=8% Similarity=0.056 Sum_probs=55.6
Q ss_pred ccCeeEEEEecChhhHHHhHHHHHH-----HhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecC
Q 007731 469 TVDIQKLIFLDTAEGVATTIRPYWS-----EATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDG 543 (591)
Q Consensus 469 ~~~i~ki~~~~~~~~~~~~l~~~l~-----~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs 543 (591)
......++++++.....+.+...+. ..++..+.+..++ .+.-....|..|-..++ +.+|.+...+++.|||
T Consensus 110 ~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~l~~~~tg-~~~g~~c~g~~K~~~l~---~~~~~~~~~~~aY~Ds 185 (211)
T PRK11590 110 SSDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQMQRRYGG-WVLTLRCLGHEKVAQLE---RKIGTPLRLYSGYSDS 185 (211)
T ss_pred hCCCEEEEEeCCcHHHHHHHHHHccccccCceEEEEEEEEEcc-EECCccCCChHHHHHHH---HHhCCCcceEEEecCC
Confidence 3455666777777665554544432 1111112221111 11112223334544444 4446677888999999
Q ss_pred hhhHHHHHHCCceEEecCCcHHHHh
Q 007731 544 ENDVEMLELASLGIALSNGSEKAKA 568 (591)
Q Consensus 544 ~NDi~Mlk~ag~gVAmgNA~~elk~ 568 (591)
.||++||+.|+++++| |..+.+++
T Consensus 186 ~~D~pmL~~a~~~~~v-np~~~l~~ 209 (211)
T PRK11590 186 KQDNPLLYFCQHRWRV-TPRGELQQ 209 (211)
T ss_pred cccHHHHHhCCCCEEE-CccHHhhc
Confidence 9999999999999999 66666654
No 80
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=98.85 E-value=2.1e-08 Score=103.80 Aligned_cols=107 Identities=13% Similarity=0.120 Sum_probs=65.3
Q ss_pred cccCeeEEEEecChhhHHHhHHHHHH-HhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhh
Q 007731 468 ATVDIQKLIFLDTAEGVATTIRPYWS-EATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGEND 546 (591)
Q Consensus 468 ~~~~i~ki~~~~~~~~~~~~l~~~l~-~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~ND 546 (591)
....+...++++........+.+.+. ..+...+.++ ++ +.+.....+...+..+++++|++++++++|||+.+|
T Consensus 157 ~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~----~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~D 231 (286)
T PLN02779 157 LAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AG----DDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIG 231 (286)
T ss_pred HHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-ec----cccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHh
Confidence 34456666666665544433333221 0111112333 22 223345566789999999999999999999999999
Q ss_pred HHHHHHCCc-eEEecCCc--HHHHhhcceecCCCCh
Q 007731 547 VEMLELASL-GIALSNGS--EKAKAVANVIGASNDE 579 (591)
Q Consensus 547 i~Mlk~ag~-gVAmgNA~--~elk~~Ad~Vt~s~~e 579 (591)
+.+.+.+|+ .|++.++. ++-...+++++.+..+
T Consensus 232 i~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~ 267 (286)
T PLN02779 232 LQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGD 267 (286)
T ss_pred HHHHHHcCCEEEEEccCCccccccCCCcEEECChhh
Confidence 999999997 44443332 2212357777765443
No 81
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=98.81 E-value=2.7e-08 Score=98.41 Aligned_cols=47 Identities=19% Similarity=0.285 Sum_probs=40.5
Q ss_pred CCCHHHHHHHHHHHcCCCCCcEEEEecCh-hhHHHHHHCCc-eEEecCC
Q 007731 516 GTSKGSGVKMLLDHLGVSTKEIMAIGDGE-NDVEMLELASL-GIALSNG 562 (591)
Q Consensus 516 gvsKg~AL~~L~e~lgI~~eeviafGDs~-NDi~Mlk~ag~-gVAmgNA 562 (591)
...+......+++++|++++++++|||+. +|+.+.+.+|+ +|.+..+
T Consensus 149 ~KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~ 197 (221)
T TIGR02253 149 EKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQG 197 (221)
T ss_pred CCCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCC
Confidence 44567899999999999999999999997 99999999996 5666543
No 82
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.80 E-value=2.7e-08 Score=97.50 Aligned_cols=63 Identities=17% Similarity=0.207 Sum_probs=48.6
Q ss_pred CCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCce-EEe--cCCc-HHH-HhhcceecCCC
Q 007731 515 PGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLG-IAL--SNGS-EKA-KAVANVIGASN 577 (591)
Q Consensus 515 ~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~g-VAm--gNA~-~el-k~~Ad~Vt~s~ 577 (591)
....|...+..+++++|++++++++|||+.+|+.+.+.+|+. |.+ |... .++ +..+++++.+.
T Consensus 129 ~~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~ 196 (205)
T TIGR01454 129 RPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKP 196 (205)
T ss_pred CCCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCH
Confidence 345678999999999999999999999999999999999973 333 3322 233 34588887654
No 83
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=98.79 E-value=7e-08 Score=87.78 Aligned_cols=43 Identities=30% Similarity=0.421 Sum_probs=37.0
Q ss_pred eEEEEecCCCccCCC--------CCCCHHHHHHHHHHHhcCCeEEEEcCCC
Q 007731 320 RYIFCDMDGTLLNSQ--------SKISLTTAKALKEALSRGLKVVVATGKT 362 (591)
Q Consensus 320 KlI~fDLDGTLld~~--------~~is~~~~eaL~~L~~~Gi~vviaTGRs 362 (591)
|+|+||+||||++.. ..+.+...++|+.|+++|++++++|+++
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~ 51 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQS 51 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCc
Confidence 689999999999631 3467888999999999999999999986
No 84
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=98.78 E-value=7.8e-08 Score=89.51 Aligned_cols=41 Identities=24% Similarity=0.317 Sum_probs=36.5
Q ss_pred CCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceE
Q 007731 517 TSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGI 557 (591)
Q Consensus 517 vsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gV 557 (591)
..|...+..+++++|+++++|++|||+..|+.+.+.+|+..
T Consensus 101 KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 101 KPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred CCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 45667888999999999999999999999999999999743
No 85
>PLN02954 phosphoserine phosphatase
Probab=98.74 E-value=2.3e-07 Score=92.01 Aligned_cols=61 Identities=23% Similarity=0.275 Sum_probs=45.9
Q ss_pred CCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCce--EEecCC--cHHHHhhcceecCCC
Q 007731 515 PGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLG--IALSNG--SEKAKAVANVIGASN 577 (591)
Q Consensus 515 ~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~g--VAmgNA--~~elk~~Ad~Vt~s~ 577 (591)
.+.+|..+++.+++++|. +++++||||.||+.|.+.++.. ++.+.. .+.....+++++.+.
T Consensus 152 ~~~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 216 (224)
T PLN02954 152 RSGGKAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDF 216 (224)
T ss_pred CCccHHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCH
Confidence 456799999999999886 6899999999999998886654 444432 244555688887654
No 86
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=98.72 E-value=1.6e-07 Score=93.68 Aligned_cols=74 Identities=11% Similarity=0.059 Sum_probs=53.4
Q ss_pred CCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCce--EEecCCcHHHHhhcceecCCCChHHHHHHHHHh
Q 007731 514 PPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLG--IALSNGSEKAKAVANVIGASNDEDGVADAIYRY 589 (591)
Q Consensus 514 p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~g--VAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~~~ 589 (591)
.....+......+++++|+++++|++|||+.+|+...+.+|+. ++|.+......+.+..+..+.+ -+.+.+..+
T Consensus 146 ~~~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~l 221 (224)
T PRK14988 146 GYPKEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLN--DYRRLIPSL 221 (224)
T ss_pred CCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCCCccchhccCCCcHH--HHHHHhhhh
Confidence 3445568899999999999999999999999999999999984 4566655443344444443332 245555544
No 87
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=98.72 E-value=1.1e-07 Score=91.54 Aligned_cols=46 Identities=9% Similarity=0.156 Sum_probs=40.2
Q ss_pred CCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCc-eEEe
Q 007731 514 PPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASL-GIAL 559 (591)
Q Consensus 514 p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~-gVAm 559 (591)
.....+...+..+++++|+++++|++|||+.+|++..+.+|+ .|++
T Consensus 139 ~~~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~i~~ 185 (188)
T PRK10725 139 QHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAVDV 185 (188)
T ss_pred cCCCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEEEee
Confidence 345677889999999999999999999999999999999997 4444
No 88
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=98.68 E-value=4e-07 Score=87.65 Aligned_cols=61 Identities=15% Similarity=0.170 Sum_probs=44.5
Q ss_pred CCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCc-eEEecCCc--HHHH-hhc--ceecCCC
Q 007731 517 TSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASL-GIALSNGS--EKAK-AVA--NVIGASN 577 (591)
Q Consensus 517 vsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~-gVAmgNA~--~elk-~~A--d~Vt~s~ 577 (591)
..+...+..+++.+|++++++++|||+.+|+.+.+.+|+ .|.+..+. .... ..+ ++++.+.
T Consensus 103 KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l 169 (181)
T PRK08942 103 KPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSL 169 (181)
T ss_pred CCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCH
Confidence 345677788999999999999999999999999999996 44554432 2222 234 6666553
No 89
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.66 E-value=1.6e-07 Score=91.49 Aligned_cols=48 Identities=23% Similarity=0.280 Sum_probs=43.6
Q ss_pred CCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecC
Q 007731 514 PPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSN 561 (591)
Q Consensus 514 p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgN 561 (591)
..+..|...++.++++.++++++++++|||.+|++|++.+|.++++..
T Consensus 151 ~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 151 CKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred CCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 346789999999999999999999999999999999999999998853
No 90
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=98.66 E-value=1.4e-07 Score=93.57 Aligned_cols=45 Identities=7% Similarity=0.028 Sum_probs=40.2
Q ss_pred CCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEe
Q 007731 515 PGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIAL 559 (591)
Q Consensus 515 ~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAm 559 (591)
....+...+..+++++|+++++|++|||+.+|+...+.+|+.++.
T Consensus 140 ~~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 140 RWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred CCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 445678999999999999999999999999999999999986653
No 91
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.63 E-value=9.1e-08 Score=91.06 Aligned_cols=41 Identities=44% Similarity=0.685 Sum_probs=37.4
Q ss_pred cCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHC
Q 007731 513 VPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELA 553 (591)
Q Consensus 513 ~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~a 553 (591)
.+.+.+|+..++.+++.+|++++++++||||.||++|++.|
T Consensus 137 ~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 45678999999999999999999999999999999999864
No 92
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=98.63 E-value=2.5e-07 Score=88.03 Aligned_cols=47 Identities=30% Similarity=0.463 Sum_probs=38.7
Q ss_pred CCCceEEEEecCCCccCCCCC------------CCHHHHHHHHHHHhcCCeEEEEcCCC
Q 007731 316 KPKFRYIFCDMDGTLLNSQSK------------ISLTTAKALKEALSRGLKVVVATGKT 362 (591)
Q Consensus 316 ~~~iKlI~fDLDGTLld~~~~------------is~~~~eaL~~L~~~Gi~vviaTGRs 362 (591)
.|+.|+++||+||||+.+.+. +.+...++|+.|+++|++++++|..+
T Consensus 10 ~~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~ 68 (166)
T TIGR01664 10 KPQSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQS 68 (166)
T ss_pred CCcCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 355789999999999986442 23778999999999999999999764
No 93
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=98.63 E-value=2.8e-07 Score=88.39 Aligned_cols=62 Identities=16% Similarity=0.155 Sum_probs=46.4
Q ss_pred CCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCce--EEecCCcH--H-HHhhcceecCCC
Q 007731 516 GTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLG--IALSNGSE--K-AKAVANVIGASN 577 (591)
Q Consensus 516 gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~g--VAmgNA~~--e-lk~~Ad~Vt~s~ 577 (591)
+..+...+..+++++|++++++++|||+.+|+.+.+.+|+. +.+..+.. . ....|++++.+.
T Consensus 105 ~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~ 171 (176)
T TIGR00213 105 RKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSL 171 (176)
T ss_pred CCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccH
Confidence 34567788899999999999999999999999999999984 34444432 1 222377777553
No 94
>PLN02940 riboflavin kinase
Probab=98.62 E-value=2.6e-07 Score=99.44 Aligned_cols=103 Identities=14% Similarity=0.023 Sum_probs=63.4
Q ss_pred ccCeeEEEEecChhhHHHhHHH-HHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhH
Q 007731 469 TVDIQKLIFLDTAEGVATTIRP-YWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDV 547 (591)
Q Consensus 469 ~~~i~ki~~~~~~~~~~~~l~~-~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi 547 (591)
...+...++++........... .+ .+...++.+.++. -+.....+...+..+++++|+++++|++|||+.+|+
T Consensus 107 ~~g~~l~IvTn~~~~~~~~~l~~~~--gl~~~Fd~ii~~d----~v~~~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di 180 (382)
T PLN02940 107 SHGVPMALASNSPRANIEAKISCHQ--GWKESFSVIVGGD----EVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGV 180 (382)
T ss_pred HCCCcEEEEeCCcHHHHHHHHHhcc--ChHhhCCEEEehh----hcCCCCCCHHHHHHHHHHcCCChhHEEEEeCCHHHH
Confidence 3455555666655433222111 11 1122244444443 223345678999999999999999999999999999
Q ss_pred HHHHHCCc-eEEecCCc--HHHHhhcceecCCC
Q 007731 548 EMLELASL-GIALSNGS--EKAKAVANVIGASN 577 (591)
Q Consensus 548 ~Mlk~ag~-gVAmgNA~--~elk~~Ad~Vt~s~ 577 (591)
.+.+.+|+ .|++.++. ......+++++.+.
T Consensus 181 ~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl 213 (382)
T PLN02940 181 MAGKAAGMEVIAVPSIPKQTHLYSSADEVINSL 213 (382)
T ss_pred HHHHHcCCEEEEECCCCcchhhccCccEEeCCH
Confidence 99999996 55565433 22223466665553
No 95
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=98.62 E-value=7.8e-07 Score=101.68 Aligned_cols=219 Identities=23% Similarity=0.249 Sum_probs=134.2
Q ss_pred cccccccchHHHHhhchhhhccccc---------------cccCCCceEEEEecCCCccCCCCCCCHHHHHHHHHHHhc-
Q 007731 288 SAYDSETNTNIQVENSDDRKQEGSL---------------RFYKPKFRYIFCDMDGTLLNSQSKISLTTAKALKEALSR- 351 (591)
Q Consensus 288 ~a~d~~~~~~~~l~~~~~~~~~~~l---------------~~~~~~iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~- 351 (591)
..++...|.+.++..+.+.-..+.+ .+.+++.++|++|+|||++...... ....|+.|...
T Consensus 457 ~~~~~~~W~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~~~---~~~~l~~L~~dp 533 (732)
T KOG1050|consen 457 STHDVVYWAKSFLQGLKRIWKVGFLGFRVTPLLTAEHIVSDYKKSKKRLILLDYDLTLIPPRSIK---AISILKDLCSDP 533 (732)
T ss_pred cchhHHHHHHHHHHhhhhhhhhcccccccccccChhHhhhhhhhccceEEEecccccccCCCCch---HHHHHHHHhcCC
Confidence 4578888888887744333222211 4556788999999999999876543 78888888876
Q ss_pred CCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEEcCCCcEEEeecCC-HHHHHHHHHHHHhCCCCEEE
Q 007731 352 GLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVHGRQGREIFRRNLD-RDFCREAYQYSWEHKVPLIA 430 (591)
Q Consensus 352 Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~d~~g~~i~~~~l~-~e~v~eil~~l~~~~i~~~i 430 (591)
+..+.|++||....+...+... ..-++++|||..+-.+|+.. ... ..++ .+.++++++++.+.--.-.+
T Consensus 534 ~n~v~i~s~~~r~~l~~~~~~~---~~lgl~aEhG~f~r~~~~w~------~~~-~~~~w~~~v~~i~~~~~ert~GS~i 603 (732)
T KOG1050|consen 534 KNIVYIVSGRGRSVLEKWFFGC---KNLGLAAEHGYFVRIPGKWE------TCV-LDLDWKDLVKDIFQYYTERTPGSYI 603 (732)
T ss_pred CCeEEEEEccCchhhhhhcccc---ccceeecccCceeccCCcee------eec-ccccHHHHHHHHHHHHHhcCCCcee
Confidence 5889999999988886655321 13478888876666665411 111 1222 23355555555443111111
Q ss_pred EeCCceeeecCCcccccccccccCCcccccccHHHhhcccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCee
Q 007731 431 FSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDML 510 (591)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~i 510 (591)
...+..+. +++....+ +. ..-.+..+...+.. ...-..+..+...+
T Consensus 604 e~k~~~l~---------~hy~~ad~------~~-----------------g~~qA~el~~~l~~--~~~~~~v~~g~~~V 649 (732)
T KOG1050|consen 604 ERKETALV---------WHYRNADP------EF-----------------GELQAKELLEHLES--KNEPVEVVRGKHIV 649 (732)
T ss_pred cccCceEE---------EeeeccCc------ch-----------------hHHHHHHHHHHhcc--cCCCeEEEecCceE
Confidence 11111110 01000000 00 01122334444443 22233455666899
Q ss_pred eecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHC
Q 007731 511 EIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELA 553 (591)
Q Consensus 511 EI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~a 553 (591)
|+-|.|++||.+...+...+.-+++.++++||...|-+|+...
T Consensus 650 ev~~~gvsk~~~~~~~~~~~~~~~df~~c~g~d~tDed~~~~~ 692 (732)
T KOG1050|consen 650 EVRPQGVSKGLAAERILSEMVKEPDFVLCIGDDRTDEDMFEFI 692 (732)
T ss_pred EEcccccchHHHHHHHHHhcCCCcceEEEecCCCChHHHHHHH
Confidence 9999999999999999999885668999999999999999874
No 96
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=98.59 E-value=4.2e-07 Score=87.10 Aligned_cols=41 Identities=22% Similarity=0.253 Sum_probs=37.0
Q ss_pred CCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCce
Q 007731 516 GTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLG 556 (591)
Q Consensus 516 gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~g 556 (591)
...+...+.++++++|++++++++|||+.+|+.+.+.+|+.
T Consensus 141 ~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 141 GKPHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred CCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 44567788999999999999999999999999999999974
No 97
>PHA02597 30.2 hypothetical protein; Provisional
Probab=98.59 E-value=3.4e-07 Score=89.13 Aligned_cols=45 Identities=18% Similarity=0.191 Sum_probs=38.1
Q ss_pred CCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHC--Cc-eEEecCCc
Q 007731 517 TSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELA--SL-GIALSNGS 563 (591)
Q Consensus 517 vsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~a--g~-gVAmgNA~ 563 (591)
..|...+..+++++| ++++++|||+.+|+...+.+ |+ .|.+.++.
T Consensus 130 ~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~ 177 (197)
T PHA02597 130 ESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGE 177 (197)
T ss_pred cccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchh
Confidence 357899999999999 78899999999999999999 97 55555543
No 98
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.58 E-value=1.7e-07 Score=84.76 Aligned_cols=59 Identities=15% Similarity=0.291 Sum_probs=47.9
Q ss_pred ceEEEEecCCCccCCCC------CCCHHHHHHHHHHHhcCCeEEEEcCCChhH---------------HHHHHHhcCCCC
Q 007731 319 FRYIFCDMDGTLLNSQS------KISLTTAKALKEALSRGLKVVVATGKTRPA---------------VISALKKVDLVG 377 (591)
Q Consensus 319 iKlI~fDLDGTLld~~~------~is~~~~eaL~~L~~~Gi~vviaTGRs~~~---------------~~~~l~~lgl~~ 377 (591)
+|+|+||+||||++.+. .+.+.++++|++++++|+.|+++|||+... ...++.+.+++.
T Consensus 1 ~K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ipY 80 (126)
T TIGR01689 1 MKRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVPY 80 (126)
T ss_pred CCEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCCC
Confidence 47999999999998542 356899999999999999999999998764 346677777753
No 99
>PRK06769 hypothetical protein; Validated
Probab=98.58 E-value=5.9e-07 Score=86.04 Aligned_cols=45 Identities=16% Similarity=0.182 Sum_probs=37.7
Q ss_pred CHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCc-eEEecCC
Q 007731 518 SKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASL-GIALSNG 562 (591)
Q Consensus 518 sKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~-gVAmgNA 562 (591)
.+...+..+++++|+++++|++|||+.+|+.+.+.+|+ +|.+..+
T Consensus 94 P~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g 139 (173)
T PRK06769 94 PSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTG 139 (173)
T ss_pred CCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecC
Confidence 44566778899999999999999999999999999996 5556543
No 100
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.55 E-value=2.1e-07 Score=94.93 Aligned_cols=59 Identities=24% Similarity=0.329 Sum_probs=54.2
Q ss_pred ceEEEEecCCCccCCCCCC---CHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCC
Q 007731 319 FRYIFCDMDGTLLNSQSKI---SLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVG 377 (591)
Q Consensus 319 iKlI~fDLDGTLld~~~~i---s~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~ 377 (591)
+|+|+|||||||++++..+ ++.+.++|.+|+++|+.++++|+++...+...++.+|+..
T Consensus 126 ~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 126 PHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred ceEEEEecCCCCcCCCCccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 4799999999999998875 6999999999999999999999999999999999999843
No 101
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=98.55 E-value=8.5e-07 Score=80.66 Aligned_cols=53 Identities=19% Similarity=0.222 Sum_probs=42.6
Q ss_pred eEEEEecCCCccCCCC---C---------CCHHHHHHHHHHHhcCCeEEEEcCC-ChhHHHHHHHh
Q 007731 320 RYIFCDMDGTLLNSQS---K---------ISLTTAKALKEALSRGLKVVVATGK-TRPAVISALKK 372 (591)
Q Consensus 320 KlI~fDLDGTLld~~~---~---------is~~~~eaL~~L~~~Gi~vviaTGR-s~~~~~~~l~~ 372 (591)
|+|++||||||++... . +.+...+.|+.|+++|++++++|++ ........++.
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~ 66 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKI 66 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHh
Confidence 6899999999998832 1 4679999999999999999999999 55555555543
No 102
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=98.54 E-value=7.2e-07 Score=85.49 Aligned_cols=42 Identities=24% Similarity=0.306 Sum_probs=38.4
Q ss_pred CCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCce
Q 007731 515 PGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLG 556 (591)
Q Consensus 515 ~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~g 556 (591)
....+...+++++++++++++++++|||+.+|+.+.+.+|+.
T Consensus 139 ~~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 139 KGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred CCCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 456788999999999999999999999999999999999973
No 103
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=98.52 E-value=4.6e-06 Score=83.94 Aligned_cols=53 Identities=25% Similarity=0.377 Sum_probs=45.6
Q ss_pred EEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEc---CCChhHHHHHHHh-cCC
Q 007731 322 IFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVAT---GKTRPAVISALKK-VDL 375 (591)
Q Consensus 322 I~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaT---GRs~~~~~~~l~~-lgl 375 (591)
++||+||||++.+..++ .+.++|+.++++|.++.+.| ||+.....+.+.. +|+
T Consensus 1 ~lfD~DGvL~~~~~~~~-~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~ 57 (236)
T TIGR01460 1 FLFDIDGVLWLGHKPIP-GAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGV 57 (236)
T ss_pred CEEeCcCccCcCCccCc-CHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 58999999999877655 88999999999999999998 8998888777766 665
No 104
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=98.51 E-value=9.6e-07 Score=83.61 Aligned_cols=43 Identities=23% Similarity=0.281 Sum_probs=37.3
Q ss_pred CCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCc-eEEe
Q 007731 517 TSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASL-GIAL 559 (591)
Q Consensus 517 vsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~-gVAm 559 (591)
..|...+..++++++++++++++|||+.+|+.+.+.+|+ ++.+
T Consensus 103 KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~ 146 (161)
T TIGR01261 103 KPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQY 146 (161)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEE
Confidence 456677888999999999999999999999999999997 4444
No 105
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.51 E-value=9.7e-06 Score=81.80 Aligned_cols=59 Identities=14% Similarity=0.293 Sum_probs=48.5
Q ss_pred CceEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHH--HHHHhcCCCC
Q 007731 318 KFRYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVI--SALKKVDLVG 377 (591)
Q Consensus 318 ~iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~--~~l~~lgl~~ 377 (591)
++++++||+||||.+.. .+.+...++|++|+++|++++++|..+..... ..++.+|+..
T Consensus 7 ~~~~~~~D~dG~l~~~~-~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~ 67 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDGN-HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINA 67 (242)
T ss_pred cCCEEEEecccccccCC-ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCc
Confidence 47899999999999864 46789999999999999999999876654433 6778888853
No 106
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=98.49 E-value=6.1e-07 Score=99.07 Aligned_cols=103 Identities=18% Similarity=0.186 Sum_probs=62.6
Q ss_pred hcccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhh
Q 007731 467 LATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGEND 546 (591)
Q Consensus 467 l~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~ND 546 (591)
+....+...++++........+.+.+. +...+..+.+... + . ...|...+..++++++ +++|++|||+.+|
T Consensus 342 Lk~~g~~l~IvS~~~~~~~~~~l~~~~--l~~~f~~i~~~d~---v-~-~~~kP~~~~~al~~l~--~~~~v~VGDs~~D 412 (459)
T PRK06698 342 IKENNCSIYIASNGLTEYLRAIVSYYD--LDQWVTETFSIEQ---I-N-SLNKSDLVKSILNKYD--IKEAAVVGDRLSD 412 (459)
T ss_pred HHHCCCeEEEEeCCchHHHHHHHHHCC--cHhhcceeEecCC---C-C-CCCCcHHHHHHHHhcC--cceEEEEeCCHHH
Confidence 344556666666666554444333321 1222344444321 2 1 2357788888888875 5899999999999
Q ss_pred HHHHHHCCc-eEEecCC--cHHHHhhcceecCCCC
Q 007731 547 VEMLELASL-GIALSNG--SEKAKAVANVIGASND 578 (591)
Q Consensus 547 i~Mlk~ag~-gVAmgNA--~~elk~~Ad~Vt~s~~ 578 (591)
+.+.+.+|+ .|++... .++-...+++++.+..
T Consensus 413 i~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~ 447 (459)
T PRK06698 413 INAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLL 447 (459)
T ss_pred HHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHH
Confidence 999999997 5555443 2222245788876543
No 107
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=98.47 E-value=2.6e-06 Score=81.40 Aligned_cols=47 Identities=17% Similarity=0.232 Sum_probs=42.0
Q ss_pred CCCceEEEEecCCCccCCCC-CCCHHHHHHHHHHHhcCCeEEEEcCCC
Q 007731 316 KPKFRYIFCDMDGTLLNSQS-KISLTTAKALKEALSRGLKVVVATGKT 362 (591)
Q Consensus 316 ~~~iKlI~fDLDGTLld~~~-~is~~~~eaL~~L~~~Gi~vviaTGRs 362 (591)
...+++|++|+||||+.... .+.+.+.++|+.|+++|++++++|+.+
T Consensus 22 ~~~v~~vv~D~Dgtl~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~ 69 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYPDHNEAYPALRDWIEELKAAGRKLLIVSNNA 69 (170)
T ss_pred HCCCCEEEEecCCccccCCCCCcChhHHHHHHHHHHcCCEEEEEeCCc
Confidence 35689999999999998665 688999999999999999999999986
No 108
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=98.46 E-value=1.3e-06 Score=85.09 Aligned_cols=80 Identities=16% Similarity=0.113 Sum_probs=52.2
Q ss_pred hcccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhh
Q 007731 467 LATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGEND 546 (591)
Q Consensus 467 l~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~ND 546 (591)
+....+...++++.+......+.+.+. +...+..+.+... ... ..+...+..+++.+|+++++|++|||+.+|
T Consensus 118 l~~~g~~~~i~T~~~~~~~~~~l~~~g--l~~~f~~~~~~~~----~~~-KP~p~~~~~~~~~~~~~~~~~i~vGD~~~D 190 (197)
T TIGR01548 118 LHRAPKGMAVVTGRPRKDAAKFLTTHG--LEILFPVQIWMED----CPP-KPNPEPLILAAKALGVEACHAAMVGDTVDD 190 (197)
T ss_pred HHHcCCcEEEECCCCHHHHHHHHHHcC--chhhCCEEEeecC----CCC-CcCHHHHHHHHHHhCcCcccEEEEeCCHHH
Confidence 344456666777666554444433321 1122334444322 222 567888999999999999999999999999
Q ss_pred HHHHHHC
Q 007731 547 VEMLELA 553 (591)
Q Consensus 547 i~Mlk~a 553 (591)
+.+.+.+
T Consensus 191 i~aA~~a 197 (197)
T TIGR01548 191 IITGRKA 197 (197)
T ss_pred HHHHHhC
Confidence 9988754
No 109
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.46 E-value=1.5e-06 Score=98.30 Aligned_cols=132 Identities=25% Similarity=0.390 Sum_probs=102.9
Q ss_pred ceEEEEecCCCccCC---CCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEE
Q 007731 319 FRYIFCDMDGTLLNS---QSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLL 395 (591)
Q Consensus 319 iKlI~fDLDGTLld~---~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~ 395 (591)
...+.++.||+++.- ...+.+...++|++|+++|++++++||.+...+..+.+.+|+. +
T Consensus 385 ~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~----~-------------- 446 (562)
T TIGR01511 385 STSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN----V-------------- 446 (562)
T ss_pred CEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc----E--------------
Confidence 467889999998753 4568899999999999999999999999999998888887650 0
Q ss_pred EEcCCCcEEEeecCCHHHHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCeeEE
Q 007731 396 VHGRQGREIFRRNLDRDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQKL 475 (591)
Q Consensus 396 I~d~~g~~i~~~~l~~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki 475 (591)
+.. +.
T Consensus 447 ---------~~~-~~----------------------------------------------------------------- 451 (562)
T TIGR01511 447 ---------RAE-VL----------------------------------------------------------------- 451 (562)
T ss_pred ---------Ecc-CC-----------------------------------------------------------------
Confidence 000 00
Q ss_pred EEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCc
Q 007731 476 IFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASL 555 (591)
Q Consensus 476 ~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~ 555 (591)
| .+|...++.+.+ +.++|+++||+.||.++++.+|+
T Consensus 452 --------------------------------------p--~~K~~~v~~l~~----~~~~v~~VGDg~nD~~al~~A~v 487 (562)
T TIGR01511 452 --------------------------------------P--DDKAALIKELQE----KGRVVAMVGDGINDAPALAQADV 487 (562)
T ss_pred --------------------------------------h--HHHHHHHHHHHH----cCCEEEEEeCCCccHHHHhhCCE
Confidence 0 012233334333 34789999999999999999999
Q ss_pred eEEecCCcHHHHhhcceecCCCChHHHHHHHH
Q 007731 556 GIALSNGSEKAKAVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 556 gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~ 587 (591)
||+|+++.+..++.||++..+++-.++.++++
T Consensus 488 gia~g~g~~~a~~~Advvl~~~~l~~l~~~i~ 519 (562)
T TIGR01511 488 GIAIGAGTDVAIEAADVVLMRNDLNDVATAID 519 (562)
T ss_pred EEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHH
Confidence 99999998888999999998888788887764
No 110
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.44 E-value=2.2e-06 Score=96.97 Aligned_cols=134 Identities=28% Similarity=0.412 Sum_probs=104.5
Q ss_pred CceEEEEecCCCccCC---CCCCCHHHHHHHHHHHhcC-CeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecC
Q 007731 318 KFRYIFCDMDGTLLNS---QSKISLTTAKALKEALSRG-LKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQG 393 (591)
Q Consensus 318 ~iKlI~fDLDGTLld~---~~~is~~~~eaL~~L~~~G-i~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NG 393 (591)
-.+.+++..||+++.. ...+.+...++|+.|+++| ++++++||.+...+..+.+++|+.
T Consensus 363 g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~----------------- 425 (556)
T TIGR01525 363 GKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID----------------- 425 (556)
T ss_pred CcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC-----------------
Confidence 3567888899988753 4568899999999999999 999999999999999999888761
Q ss_pred EEEEcCCCcEEEeecCCHHHHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCee
Q 007731 394 LLVHGRQGREIFRRNLDRDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQ 473 (591)
Q Consensus 394 A~I~d~~g~~i~~~~l~~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ 473 (591)
..+.. .
T Consensus 426 ---------~~f~~-~---------------------------------------------------------------- 431 (556)
T TIGR01525 426 ---------EVHAE-L---------------------------------------------------------------- 431 (556)
T ss_pred ---------eeecc-C----------------------------------------------------------------
Confidence 00000 0
Q ss_pred EEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHC
Q 007731 474 KLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELA 553 (591)
Q Consensus 474 ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~a 553 (591)
.| -+|...++.+.+ ..++|+++||+.||+++++.|
T Consensus 432 ---------------------------------------~p--~~K~~~v~~l~~----~~~~v~~vGDg~nD~~al~~A 466 (556)
T TIGR01525 432 ---------------------------------------LP--EDKLAIVKELQE----EGGVVAMVGDGINDAPALAAA 466 (556)
T ss_pred ---------------------------------------CH--HHHHHHHHHHHH----cCCEEEEEECChhHHHHHhhC
Confidence 00 012233333332 346999999999999999999
Q ss_pred CceEEecCCcHHHHhhcceecCCCChHHHHHHHH
Q 007731 554 SLGIALSNGSEKAKAVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 554 g~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~ 587 (591)
|+|++|+++.+..++.||+++.+++-.++.++++
T Consensus 467 ~vgia~g~~~~~~~~~Ad~vi~~~~~~~l~~~i~ 500 (556)
T TIGR01525 467 DVGIAMGAGSDVAIEAADIVLLNDDLSSLPTAID 500 (556)
T ss_pred CEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHH
Confidence 9999999989999999999999988888888774
No 111
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=98.44 E-value=2.8e-06 Score=79.06 Aligned_cols=76 Identities=17% Similarity=0.187 Sum_probs=49.5
Q ss_pred cCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHH
Q 007731 470 VDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEM 549 (591)
Q Consensus 470 ~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~M 549 (591)
..+...++++........+.+.+ +...+..+.+... .. ...+...+.++++++|+++ +|++|||+.+|+.+
T Consensus 79 ~g~~~~i~T~~~~~~~~~~~~~~---l~~~f~~i~~~~~----~~-~Kp~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~a 149 (154)
T TIGR01549 79 AGIKLGIISNGSLRAQKLLLRKH---LGDYFDLILGSDE----FG-AKPEPEIFLAALESLGLPP-EVLHVGDNLNDIEG 149 (154)
T ss_pred CcCeEEEEeCCchHHHHHHHHHH---HHhcCcEEEecCC----CC-CCcCHHHHHHHHHHcCCCC-CEEEEeCCHHHHHH
Confidence 34555555555544443333331 1222333333321 23 5567899999999999998 99999999999999
Q ss_pred HHHCC
Q 007731 550 LELAS 554 (591)
Q Consensus 550 lk~ag 554 (591)
.+.+|
T Consensus 150 a~~aG 154 (154)
T TIGR01549 150 ARNAG 154 (154)
T ss_pred HHHcc
Confidence 99876
No 112
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=98.43 E-value=1.5e-06 Score=84.48 Aligned_cols=84 Identities=13% Similarity=0.112 Sum_probs=54.5
Q ss_pred ccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHH
Q 007731 469 TVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVE 548 (591)
Q Consensus 469 ~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~ 548 (591)
...+...++++.+......+.+.+. +...++.+.+.. -+.....+......+++++|++++++++|||+.+|+.
T Consensus 106 ~~g~~~~i~Sn~~~~~~~~~l~~~g--l~~~fd~i~~s~----~~~~~KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~ 179 (198)
T TIGR01428 106 ERGYRLAILSNGSPAMLKSLVKHAG--LDDPFDAVLSAD----AVRAYKPAPQVYQLALEALGVPPDEVLFVASNPWDLG 179 (198)
T ss_pred HCCCeEEEEeCCCHHHHHHHHHHCC--ChhhhheeEehh----hcCCCCCCHHHHHHHHHHhCCChhhEEEEeCCHHHHH
Confidence 3345556666655444333322221 112233344332 2233455688899999999999999999999999999
Q ss_pred HHHHCCceEE
Q 007731 549 MLELASLGIA 558 (591)
Q Consensus 549 Mlk~ag~gVA 558 (591)
..+.+|+..+
T Consensus 180 ~A~~~G~~~i 189 (198)
T TIGR01428 180 GAKKFGFKTA 189 (198)
T ss_pred HHHHCCCcEE
Confidence 9999997433
No 113
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=98.42 E-value=3.8e-06 Score=82.02 Aligned_cols=41 Identities=24% Similarity=0.281 Sum_probs=36.2
Q ss_pred CCHHHHHHHHHHHcCCCCCcEEEEecCh-hhHHHHHHCCceE
Q 007731 517 TSKGSGVKMLLDHLGVSTKEIMAIGDGE-NDVEMLELASLGI 557 (591)
Q Consensus 517 vsKg~AL~~L~e~lgI~~eeviafGDs~-NDi~Mlk~ag~gV 557 (591)
..+.....++++++|++++++++|||+. +|+...+.+|+..
T Consensus 160 KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~ 201 (203)
T TIGR02252 160 KPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRA 201 (203)
T ss_pred CCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCee
Confidence 3456779999999999999999999997 9999999999753
No 114
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.42 E-value=8e-06 Score=81.04 Aligned_cols=38 Identities=26% Similarity=0.222 Sum_probs=31.4
Q ss_pred CCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEE
Q 007731 517 TSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIA 558 (591)
Q Consensus 517 vsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVA 558 (591)
..|..++ ++++..+++|++||||.||+.+++.||+.++
T Consensus 147 ~~K~~~l----~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 147 CCKPSLI----RKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred CchHHHH----HHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 4577655 4567778899999999999999999999666
No 115
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=98.39 E-value=2e-05 Score=91.95 Aligned_cols=101 Identities=24% Similarity=0.311 Sum_probs=77.8
Q ss_pred cccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhH
Q 007731 468 ATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDV 547 (591)
Q Consensus 468 ~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi 547 (591)
....+..+++++++......+.+.+. - . .+.++.|. +|...++.+.+ ...|+++||+.||.
T Consensus 581 ~~~gi~~~llTGd~~~~a~~ia~~lg----i--~------~~~~~~p~--~K~~~v~~l~~-----~~~v~mvGDgiNDa 641 (741)
T PRK11033 581 KALGIKGVMLTGDNPRAAAAIAGELG----I--D------FRAGLLPE--DKVKAVTELNQ-----HAPLAMVGDGINDA 641 (741)
T ss_pred HHCCCEEEEEcCCCHHHHHHHHHHcC----C--C------eecCCCHH--HHHHHHHHHhc-----CCCEEEEECCHHhH
Confidence 34567777888887776666555432 1 1 12234554 79998888753 24799999999999
Q ss_pred HHHHHCCceEEecCCcHHHHhhcceecCCCChHHHHHHHH
Q 007731 548 EMLELASLGIALSNGSEKAKAVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 548 ~Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~ 587 (591)
++++.+++||+|+++.+..++.||.+...++-.++.++|+
T Consensus 642 pAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~ 681 (741)
T PRK11033 642 PAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIE 681 (741)
T ss_pred HHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHH
Confidence 9999999999999999999999999998888888887764
No 116
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=98.37 E-value=4.2e-06 Score=99.78 Aligned_cols=66 Identities=29% Similarity=0.418 Sum_probs=53.8
Q ss_pred CHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecCCcHHHHhhcceecCCCChHHHHHHHH
Q 007731 518 SKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSNGSEKAKAVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 518 sKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~ 587 (591)
+|...++.+. .. .+.|.++|||.||.+|++.|++||+|+++.+.+|+.||+++.+++=..+.++|+
T Consensus 618 ~K~~iV~~lq-~~---g~~va~iGDG~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~ 683 (917)
T TIGR01116 618 HKSELVELLQ-EQ---GEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVE 683 (917)
T ss_pred HHHHHHHHHH-hc---CCeEEEecCCcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHH
Confidence 4666666543 33 357888999999999999999999999999999999999998876666777664
No 117
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=98.37 E-value=4.6e-06 Score=82.36 Aligned_cols=45 Identities=20% Similarity=0.243 Sum_probs=38.5
Q ss_pred CCCHHHHHHHHHHHc-CCCCCcEEEEecCh-hhHHHHHHCCc-eEEec
Q 007731 516 GTSKGSGVKMLLDHL-GVSTKEIMAIGDGE-NDVEMLELASL-GIALS 560 (591)
Q Consensus 516 gvsKg~AL~~L~e~l-gI~~eeviafGDs~-NDi~Mlk~ag~-gVAmg 560 (591)
...+...+..+++++ |++++++++|||+. +|+.+.+.+|+ +|.+.
T Consensus 151 ~KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~ 198 (224)
T TIGR02254 151 QKPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMN 198 (224)
T ss_pred CCCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEEC
Confidence 346678899999999 99999999999997 89999999997 44443
No 118
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=98.37 E-value=3.4e-06 Score=101.36 Aligned_cols=68 Identities=25% Similarity=0.310 Sum_probs=56.2
Q ss_pred CCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecC-CcHHHHhhcceecCCCChHHHHHHHHH
Q 007731 517 TSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSN-GSEKAKAVANVIGASNDEDGVADAIYR 588 (591)
Q Consensus 517 vsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgN-A~~elk~~Ad~Vt~s~~edGVa~~L~~ 588 (591)
..|..-++.+. +.| .-|.++|||.||.+|++.|++|||||+ +.+..|+.||+|..+++=..+.++|++
T Consensus 670 eqK~~IV~~lq-~~g---~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~ 738 (997)
T TIGR01106 670 QQKLIIVEGCQ-RQG---AIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEE 738 (997)
T ss_pred HHHHHHHHHHH-HCC---CEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHH
Confidence 36777777764 444 368999999999999999999999995 688889999999988777777777653
No 119
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=98.33 E-value=8.7e-06 Score=78.27 Aligned_cols=42 Identities=10% Similarity=0.177 Sum_probs=37.9
Q ss_pred CCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEE
Q 007731 517 TSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIA 558 (591)
Q Consensus 517 vsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVA 558 (591)
..+......+++++|++++++++|||+..|+...+.+|+..+
T Consensus 141 KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i 182 (184)
T TIGR01993 141 KPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKTV 182 (184)
T ss_pred CCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEe
Confidence 456789999999999999999999999999999999997543
No 120
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.33 E-value=1.5e-06 Score=88.76 Aligned_cols=59 Identities=27% Similarity=0.360 Sum_probs=54.1
Q ss_pred ceEEEEecCCCccCCCCCC---CHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCC
Q 007731 319 FRYIFCDMDGTLLNSQSKI---SLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVG 377 (591)
Q Consensus 319 iKlI~fDLDGTLld~~~~i---s~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~ 377 (591)
.|+|+|||||||+++++.+ ++.+.++|.+|+++|+.++++|+.+...+...++.+|+..
T Consensus 128 ~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 128 PHVIVFDLDSTLITDEEPVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred ccEEEEecCCCccCCCCccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 4799999999999998887 7999999999999999999999888888899999999853
No 121
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=98.33 E-value=4.7e-06 Score=98.71 Aligned_cols=66 Identities=23% Similarity=0.349 Sum_probs=55.5
Q ss_pred CHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecCCcHHHHhhcceecCCCChHHHHHHHH
Q 007731 518 SKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSNGSEKAKAVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 518 sKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~ 587 (591)
+|..-++.+.+ .| +.|.++|||.||.++|+.|++||||+++.+..|+.||.|..+++=..|.++++
T Consensus 590 ~K~~iV~~lq~-~G---~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~aADiVLldd~~~~I~~ai~ 655 (867)
T TIGR01524 590 QKSRIIGLLKK-AG---HTVGFLGDGINDAPALRKADVGISVDTAADIAKEASDIILLEKSLMVLEEGVI 655 (867)
T ss_pred HHHHHHHHHHh-CC---CEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHhCCEEEecCChHHHHHHHH
Confidence 46666666643 34 47999999999999999999999999999999999999998877777877775
No 122
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.32 E-value=8.7e-06 Score=77.99 Aligned_cols=42 Identities=33% Similarity=0.445 Sum_probs=35.6
Q ss_pred CCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEE
Q 007731 514 PPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIA 558 (591)
Q Consensus 514 p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVA 558 (591)
+.+..|+..++.+++.+ ++++++||||.||+.+++.+++.+|
T Consensus 145 ~~g~~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCCHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCcccc
Confidence 45678999999988765 6899999999999999999986554
No 123
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=98.30 E-value=1.2e-05 Score=91.95 Aligned_cols=133 Identities=18% Similarity=0.255 Sum_probs=102.3
Q ss_pred ceEEEEecCCCccC---CCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEE
Q 007731 319 FRYIFCDMDGTLLN---SQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLL 395 (591)
Q Consensus 319 iKlI~fDLDGTLld---~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~ 395 (591)
.+.+++-.|++++. -...+-++..++++++++.|++++++||.....+..+.+++|+.
T Consensus 426 ~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~------------------- 486 (675)
T TIGR01497 426 GTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD------------------- 486 (675)
T ss_pred CeEEEEEECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------
Confidence 45666667888774 23457899999999999999999999999999999999988861
Q ss_pred EEcCCCcEEEeecCCHHHHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCeeEE
Q 007731 396 VHGRQGREIFRRNLDRDFCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQKL 475 (591)
Q Consensus 396 I~d~~g~~i~~~~l~~e~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki 475 (591)
.++.+ .
T Consensus 487 -------~v~a~-~------------------------------------------------------------------ 492 (675)
T TIGR01497 487 -------DFIAE-A------------------------------------------------------------------ 492 (675)
T ss_pred -------EEEcC-C------------------------------------------------------------------
Confidence 00000 0
Q ss_pred EEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCc
Q 007731 476 IFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASL 555 (591)
Q Consensus 476 ~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~ 555 (591)
.+ -+|...++.++++. ..++++||+.||.++|+.|++
T Consensus 493 ----~P-----------------------------------edK~~~v~~lq~~g----~~VamvGDG~NDapAL~~Adv 529 (675)
T TIGR01497 493 ----TP-----------------------------------EDKIALIRQEQAEG----KLVAMTGDGTNDAPALAQADV 529 (675)
T ss_pred ----CH-----------------------------------HHHHHHHHHHHHcC----CeEEEECCCcchHHHHHhCCE
Confidence 00 12334444444332 369999999999999999999
Q ss_pred eEEecCCcHHHHhhcceecCCCChHHHHHHHH
Q 007731 556 GIALSNGSEKAKAVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 556 gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~ 587 (591)
|+||+++.+..|+.||+|.-+.+=..+.++++
T Consensus 530 GiAm~~gt~~akeaadivLldd~~s~Iv~av~ 561 (675)
T TIGR01497 530 GVAMNSGTQAAKEAANMVDLDSDPTKLIEVVH 561 (675)
T ss_pred eEEeCCCCHHHHHhCCEEECCCCHHHHHHHHH
Confidence 99999999999999999988887778887775
No 124
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=98.29 E-value=5.2e-06 Score=86.26 Aligned_cols=58 Identities=17% Similarity=0.234 Sum_probs=49.9
Q ss_pred CceEEEEecCCCccCCC------------CCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 318 KFRYIFCDMDGTLLNSQ------------SKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 318 ~iKlI~fDLDGTLld~~------------~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
+.+++++|+||||.+.. ..+.+...++|++|.++|+.++++|||+.......++.+++
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~ 226 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQ 226 (300)
T ss_pred CCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHH
Confidence 34789999999999743 24778999999999999999999999999888888887765
No 125
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=98.29 E-value=1.2e-05 Score=91.95 Aligned_cols=53 Identities=25% Similarity=0.499 Sum_probs=48.5
Q ss_pred CcEEEEecChhhHHHHHHCCceEEecCCcHHHHhhcceecCCCChHHHHHHHH
Q 007731 535 KEIMAIGDGENDVEMLELASLGIALSNGSEKAKAVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 535 eeviafGDs~NDi~Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~ 587 (591)
+-|.++||+.||.++|+.|++||||+++.+..|+.||.|.-+++=..+.++++
T Consensus 508 ~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~~s~Iv~av~ 560 (679)
T PRK01122 508 RLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVE 560 (679)
T ss_pred CeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHH
Confidence 45899999999999999999999999999999999999998888778888775
No 126
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=98.28 E-value=1.1e-05 Score=81.18 Aligned_cols=30 Identities=23% Similarity=0.448 Sum_probs=23.6
Q ss_pred HHHHcCCCCCcEEEEecChhhHHHHHHCCc-eEEe
Q 007731 526 LLDHLGVSTKEIMAIGDGENDVEMLELASL-GIAL 559 (591)
Q Consensus 526 L~e~lgI~~eeviafGDs~NDi~Mlk~ag~-gVAm 559 (591)
.++.+|+ ++++||+.||+...+.+|+ ++++
T Consensus 180 ~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V 210 (237)
T TIGR01672 180 WIQDKNI----RIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred HHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEE
Confidence 3455665 7999999999999999996 4444
No 127
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=98.28 E-value=4.5e-05 Score=87.57 Aligned_cols=104 Identities=26% Similarity=0.347 Sum_probs=84.2
Q ss_pred hcccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhh
Q 007731 467 LATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGEND 546 (591)
Q Consensus 467 l~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~ND 546 (591)
+....+..++++++++...+.+.+.+.- ...+-|+.|. +|...++.+.++. ..++++||+.||
T Consensus 549 L~~~Gi~~~mLTGDn~~~A~~iA~~lGI-----------d~v~AellPe--dK~~~V~~l~~~g----~~VamVGDGIND 611 (713)
T COG2217 549 LKALGIKVVMLTGDNRRTAEAIAKELGI-----------DEVRAELLPE--DKAEIVRELQAEG----RKVAMVGDGIND 611 (713)
T ss_pred HHHCCCeEEEEcCCCHHHHHHHHHHcCh-----------HhheccCCcH--HHHHHHHHHHhcC----CEEEEEeCCchh
Confidence 3456788888899988877777665431 1124467774 5999999987543 579999999999
Q ss_pred HHHHHHCCceEEecCCcHHHHhhcceecCCCChHHHHHHHH
Q 007731 547 VEMLELASLGIALSNGSEKAKAVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 547 i~Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~ 587 (591)
.+.|..|++|||||.+.+-.++.||.+.-.++=..|.++|+
T Consensus 612 APALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~ 652 (713)
T COG2217 612 APALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAID 652 (713)
T ss_pred HHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHH
Confidence 99999999999999999999999999998888888888875
No 128
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=98.28 E-value=5.2e-06 Score=98.63 Aligned_cols=66 Identities=27% Similarity=0.366 Sum_probs=55.4
Q ss_pred CHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecCCcHHHHhhcceecCCCChHHHHHHHH
Q 007731 518 SKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSNGSEKAKAVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 518 sKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~ 587 (591)
+|..-++.+.+ .| +-|.++|||.||.++|+.|++||||+++.+..|+.||.|..+++=..|.++++
T Consensus 625 ~K~~iV~~Lq~-~G---~vVamtGDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~ 690 (903)
T PRK15122 625 QKSRVLKALQA-NG---HTVGFLGDGINDAPALRDADVGISVDSGADIAKESADIILLEKSLMVLEEGVI 690 (903)
T ss_pred HHHHHHHHHHh-CC---CEEEEECCCchhHHHHHhCCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHH
Confidence 46666666644 33 46899999999999999999999999999999999999998877777777765
No 129
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=98.28 E-value=4.9e-06 Score=98.72 Aligned_cols=66 Identities=24% Similarity=0.329 Sum_probs=55.6
Q ss_pred CHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecCCcHHHHhhcceecCCCChHHHHHHHH
Q 007731 518 SKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSNGSEKAKAVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 518 sKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~ 587 (591)
+|..-++.+.+ .| +-|.++|||.||.++|+.|++||||+++.+..|+.||.|..+.+=..|.++++
T Consensus 625 ~K~~IV~~Lq~-~G---~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLldd~~~~I~~ai~ 690 (902)
T PRK10517 625 HKERIVTLLKR-EG---HVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVI 690 (902)
T ss_pred HHHHHHHHHHH-CC---CEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHHhCCEEEecCChHHHHHHHH
Confidence 46666666644 34 46899999999999999999999999999999999999998877777777765
No 130
>PRK09449 dUMP phosphatase; Provisional
Probab=98.28 E-value=8e-06 Score=81.00 Aligned_cols=62 Identities=16% Similarity=0.174 Sum_probs=44.0
Q ss_pred CCCHHHHHHHHHHHcCCC-CCcEEEEecCh-hhHHHHHHCCce-EEecC-CcHHHH-hhcceecCCC
Q 007731 516 GTSKGSGVKMLLDHLGVS-TKEIMAIGDGE-NDVEMLELASLG-IALSN-GSEKAK-AVANVIGASN 577 (591)
Q Consensus 516 gvsKg~AL~~L~e~lgI~-~eeviafGDs~-NDi~Mlk~ag~g-VAmgN-A~~elk-~~Ad~Vt~s~ 577 (591)
...+...+..+++++|+. +++|++|||+. +|+...+.+|+. |.+.. +.+... ..+++++.+.
T Consensus 149 ~KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~ 215 (224)
T PRK09449 149 AKPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSL 215 (224)
T ss_pred CCCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCH
Confidence 455678899999999985 47999999997 799999999974 45432 222111 1366666554
No 131
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=98.27 E-value=7.9e-06 Score=98.38 Aligned_cols=67 Identities=28% Similarity=0.402 Sum_probs=56.9
Q ss_pred CCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEec-CCcHHHHhhcceecCCCChHHHHHHHH
Q 007731 517 TSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALS-NGSEKAKAVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 517 vsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmg-NA~~elk~~Ad~Vt~s~~edGVa~~L~ 587 (591)
-.|..-++.+.+. | +.|.++|||.||.+|++.|++||||| ++.+..|+.||+|..+++=..|.++|.
T Consensus 732 ~~K~~iV~~lq~~-g---~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~ 799 (1053)
T TIGR01523 732 QTKVKMIEALHRR-K---AFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIE 799 (1053)
T ss_pred HHHHHHHHHHHhc-C---CeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHH
Confidence 3577777777553 3 46899999999999999999999998 788999999999998888778887775
No 132
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=98.26 E-value=4.9e-06 Score=83.74 Aligned_cols=47 Identities=19% Similarity=0.218 Sum_probs=39.7
Q ss_pred CCCCHHHHHHHHHHHcCCCCCcEEEEecC-hhhHHHHHHCCceEEecC
Q 007731 515 PGTSKGSGVKMLLDHLGVSTKEIMAIGDG-ENDVEMLELASLGIALSN 561 (591)
Q Consensus 515 ~gvsKg~AL~~L~e~lgI~~eeviafGDs-~NDi~Mlk~ag~gVAmgN 561 (591)
....+......+++++|+++++|++|||+ ..|+...+.+|+..+..+
T Consensus 161 ~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~ 208 (238)
T PRK10748 161 RSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWIN 208 (238)
T ss_pred cCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEc
Confidence 34567889999999999999999999999 699999999997444433
No 133
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=98.26 E-value=4.6e-06 Score=83.07 Aligned_cols=49 Identities=16% Similarity=0.286 Sum_probs=40.7
Q ss_pred cCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCc-eEEecC
Q 007731 513 VPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASL-GIALSN 561 (591)
Q Consensus 513 ~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~-gVAmgN 561 (591)
+..+..........++++|+++++|++|.||.|.+...+.||. .|++.+
T Consensus 138 v~~~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~ 187 (221)
T COG0637 138 VARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGVPA 187 (221)
T ss_pred HhcCCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEEecC
Confidence 3344556788889999999999999999999999999999996 444444
No 134
>PRK08238 hypothetical protein; Validated
Probab=98.26 E-value=1.1e-05 Score=89.06 Aligned_cols=35 Identities=14% Similarity=0.186 Sum_probs=28.1
Q ss_pred CcEEEEecChhhHHHHHHCCceEEecCCcHHHHhhc
Q 007731 535 KEIMAIGDGENDVEMLELASLGIALSNGSEKAKAVA 570 (591)
Q Consensus 535 eeviafGDs~NDi~Mlk~ag~gVAmgNA~~elk~~A 570 (591)
+++.++|||.+|++|++.++.+|+|.... .+++.|
T Consensus 140 ~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~-~l~~~a 174 (479)
T PRK08238 140 RGFDYAGNSAADLPVWAAARRAIVVGASP-GVARAA 174 (479)
T ss_pred cCeeEecCCHHHHHHHHhCCCeEEECCCH-HHHHHH
Confidence 45788999999999999999999996544 355544
No 135
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=98.25 E-value=5.9e-06 Score=98.87 Aligned_cols=66 Identities=32% Similarity=0.500 Sum_probs=55.8
Q ss_pred CHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEec-CCcHHHHhhcceecCCCChHHHHHHHH
Q 007731 518 SKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALS-NGSEKAKAVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 518 sKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmg-NA~~elk~~Ad~Vt~s~~edGVa~~L~ 587 (591)
+|..-++.+.+ .| +-|.++|||.||.++++.|++||||| ++.+..|+.||+|..+++=..|.++|+
T Consensus 656 ~K~~iV~~lq~-~g---~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~ 722 (941)
T TIGR01517 656 DKQLLVLMLKD-MG---EVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVK 722 (941)
T ss_pred HHHHHHHHHHH-CC---CEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHH
Confidence 57777776654 33 47999999999999999999999999 899999999999998877777777774
No 136
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=98.23 E-value=7.8e-06 Score=80.82 Aligned_cols=94 Identities=10% Similarity=0.053 Sum_probs=53.7
Q ss_pred cCeeEEEEecChhhHHHhHHHHHH-----HhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecCh
Q 007731 470 VDIQKLIFLDTAEGVATTIRPYWS-----EATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGE 544 (591)
Q Consensus 470 ~~i~ki~~~~~~~~~~~~l~~~l~-----~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~ 544 (591)
.....++++.+.+...+.+.+... ..++..+.+ ..+....-....|..|-..++.. ++.+...+++.|||.
T Consensus 110 ~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~le~-~~gg~~~g~~c~g~~Kv~rl~~~---~~~~~~~~~aYsDS~ 185 (210)
T TIGR01545 110 SDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQIER-GNGGWVLPLRCLGHEKVAQLEQK---IGSPLKLYSGYSDSK 185 (210)
T ss_pred CCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEEeEE-eCCceEcCccCCChHHHHHHHHH---hCCChhheEEecCCc
Confidence 456666777777665554443311 111111111 11111111122334455555544 455667889999999
Q ss_pred hhHHHHHHCCceEEecCCcHHHHh
Q 007731 545 NDVEMLELASLGIALSNGSEKAKA 568 (591)
Q Consensus 545 NDi~Mlk~ag~gVAmgNA~~elk~ 568 (591)
||++||+.|+.+++| |..+.++.
T Consensus 186 ~D~pmL~~a~~~~~V-np~~~L~~ 208 (210)
T TIGR01545 186 QDNPLLAFCEHRWRV-SKRGELQQ 208 (210)
T ss_pred ccHHHHHhCCCcEEE-CcchHhcc
Confidence 999999999999999 56666554
No 137
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=98.22 E-value=2.1e-05 Score=89.98 Aligned_cols=53 Identities=28% Similarity=0.496 Sum_probs=47.9
Q ss_pred CcEEEEecChhhHHHHHHCCceEEecCCcHHHHhhcceecCCCChHHHHHHHH
Q 007731 535 KEIMAIGDGENDVEMLELASLGIALSNGSEKAKAVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 535 eeviafGDs~NDi~Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~ 587 (591)
+-|.++||+.||.+.|+.|++||||+++.+..|+.||.|.-+.+=..+.++++
T Consensus 504 ~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~ls~Iv~av~ 556 (673)
T PRK14010 504 HIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVL 556 (673)
T ss_pred CEEEEECCChhhHHHHHhCCEEEEeCCCCHHHHHhCCEEEcCCCHHHHHHHHH
Confidence 46889999999999999999999999999999999999988877777777765
No 138
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.22 E-value=6.5e-06 Score=99.25 Aligned_cols=114 Identities=13% Similarity=0.044 Sum_probs=71.7
Q ss_pred hcccCeeEEEEecChhhHHHhHHHHHHHhcc-CCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChh
Q 007731 467 LATVDIQKLIFLDTAEGVATTIRPYWSEATK-DRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGEN 545 (591)
Q Consensus 467 l~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~-~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~N 545 (591)
+....+...++.+..........+.+. +. ..++.+.+.. -......+...+..+++++|+++++|++|||+.+
T Consensus 173 Lk~~G~~l~IvSn~~~~~~~~~L~~~g--l~~~~Fd~iv~~~----~~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~ 246 (1057)
T PLN02919 173 CKNKGLKVAVASSADRIKVDANLAAAG--LPLSMFDAIVSAD----AFENLKPAPDIFLAAAKILGVPTSECVVIEDALA 246 (1057)
T ss_pred HHhCCCeEEEEeCCcHHHHHHHHHHcC--CChhHCCEEEECc----ccccCCCCHHHHHHHHHHcCcCcccEEEEcCCHH
Confidence 334456666666655544333332221 11 1234444442 2234456688999999999999999999999999
Q ss_pred hHHHHHHCCc-eEEecCC--cHHHHh-hcceecCCCChHHHHHHH
Q 007731 546 DVEMLELASL-GIALSNG--SEKAKA-VANVIGASNDEDGVADAI 586 (591)
Q Consensus 546 Di~Mlk~ag~-gVAmgNA--~~elk~-~Ad~Vt~s~~edGVa~~L 586 (591)
|+...+.+|+ .|.+..+ .+++.. .+++++.+..+-.+..++
T Consensus 247 Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~ 291 (1057)
T PLN02919 247 GVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDIL 291 (1057)
T ss_pred HHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHH
Confidence 9999999997 5555443 344443 366777776654444443
No 139
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=98.21 E-value=5.3e-06 Score=81.02 Aligned_cols=77 Identities=25% Similarity=0.323 Sum_probs=50.1
Q ss_pred hcccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhh
Q 007731 467 LATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGEND 546 (591)
Q Consensus 467 l~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~ND 546 (591)
+....+...+++++.......+...+ +-.-..+.+ ++. +......+..+++.+++++.+|+++||+.||
T Consensus 139 L~~~Gi~~~i~TGD~~~~a~~~~~~l----gi~~~~v~a-----~~~--~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD 207 (215)
T PF00702_consen 139 LKEAGIKVAILTGDNESTASAIAKQL----GIFDSIVFA-----RVI--GKPEPKIFLRIIKELQVKPGEVAMVGDGVND 207 (215)
T ss_dssp HHHTTEEEEEEESSEHHHHHHHHHHT----TSCSEEEEE-----SHE--TTTHHHHHHHHHHHHTCTGGGEEEEESSGGH
T ss_pred hhccCcceeeeecccccccccccccc----ccccccccc-----ccc--ccccchhHHHHHHHHhcCCCEEEEEccCHHH
Confidence 34456777777777766555554443 211111111 110 2223346688899999999999999999999
Q ss_pred HHHHHHCC
Q 007731 547 VEMLELAS 554 (591)
Q Consensus 547 i~Mlk~ag 554 (591)
+.|++.||
T Consensus 208 ~~al~~Ag 215 (215)
T PF00702_consen 208 APALKAAG 215 (215)
T ss_dssp HHHHHHSS
T ss_pred HHHHHhCc
Confidence 99999986
No 140
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=98.21 E-value=6.9e-05 Score=76.46 Aligned_cols=56 Identities=25% Similarity=0.329 Sum_probs=43.6
Q ss_pred CCCceEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCCh---hHHHHHHHh
Q 007731 316 KPKFRYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTR---PAVISALKK 372 (591)
Q Consensus 316 ~~~iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~---~~~~~~l~~ 372 (591)
+++++.++||+||||.+... .-+...++|+.|+++|.++++.|-.+. ......+..
T Consensus 5 ~~~y~~~l~DlDGvl~~G~~-~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~ 63 (269)
T COG0647 5 MDKYDGFLFDLDGVLYRGNE-AIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSS 63 (269)
T ss_pred hhhcCEEEEcCcCceEeCCc-cCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHh
Confidence 44688999999999997654 556779999999999999999985544 434455555
No 141
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.20 E-value=1.3e-05 Score=90.16 Aligned_cols=54 Identities=33% Similarity=0.471 Sum_probs=47.9
Q ss_pred CCcEEEEecChhhHHHHHHCCceEEec-CCcHHHHhhcceecCCCChHHHHHHHH
Q 007731 534 TKEIMAIGDGENDVEMLELASLGIALS-NGSEKAKAVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 534 ~eeviafGDs~NDi~Mlk~ag~gVAmg-NA~~elk~~Ad~Vt~s~~edGVa~~L~ 587 (591)
.++++++||+.||+++++.||+|++|+ ++.+..++.||++..+++-.++.++++
T Consensus 425 ~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~ 479 (536)
T TIGR01512 425 YGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIR 479 (536)
T ss_pred CCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHH
Confidence 379999999999999999999999999 788889999999997777777877664
No 142
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=98.19 E-value=1e-05 Score=79.45 Aligned_cols=47 Identities=17% Similarity=0.285 Sum_probs=40.0
Q ss_pred CCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCc-eEEecCCc
Q 007731 517 TSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASL-GIALSNGS 563 (591)
Q Consensus 517 vsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~-gVAmgNA~ 563 (591)
.........+++++|+++++|++|||+..|+.+.+.+|+ +|.+.+..
T Consensus 152 KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~~ 199 (211)
T TIGR02247 152 KPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSDEE 199 (211)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECCHH
Confidence 344778999999999999999999999999999999997 55655543
No 143
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.16 E-value=6.5e-05 Score=74.27 Aligned_cols=41 Identities=29% Similarity=0.311 Sum_probs=33.2
Q ss_pred CCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEec
Q 007731 516 GTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALS 560 (591)
Q Consensus 516 gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmg 560 (591)
|..|..+++.+. ...+++++||||.||+.|++.||+.+|=+
T Consensus 142 g~~K~~~l~~~~----~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 142 GCCKPSLIRKLS----EPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred CCCHHHHHHHHh----hcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 456888877654 35678999999999999999999977644
No 144
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=98.15 E-value=1.4e-05 Score=93.46 Aligned_cols=71 Identities=30% Similarity=0.434 Sum_probs=58.7
Q ss_pred eecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecCCcHHHHhhcceecCCCChHHHHHHHH
Q 007731 511 EIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSNGSEKAKAVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 511 EI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~ 587 (591)
.+.|. +|..-++.+.+ .| +-|.++|||.||.+.|+.|++||||+++.+..|+.||.|..+++=..|.++|+
T Consensus 517 r~~Pe--~K~~iV~~lq~-~G---~~VamvGDGvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~ 587 (755)
T TIGR01647 517 EVFPE--HKYEIVEILQK-RG---HLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAIL 587 (755)
T ss_pred ecCHH--HHHHHHHHHHh-cC---CEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHH
Confidence 34443 47777777643 34 47999999999999999999999999999999999999998888778888775
No 145
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=98.14 E-value=1.7e-05 Score=79.41 Aligned_cols=43 Identities=33% Similarity=0.490 Sum_probs=36.3
Q ss_pred eeecCCCCCHHHHHHHHHHHc---CCCCCcEEEEecChhhHHHHHH
Q 007731 510 LEIVPPGTSKGSGVKMLLDHL---GVSTKEIMAIGDGENDVEMLEL 552 (591)
Q Consensus 510 iEI~p~gvsKg~AL~~L~e~l---gI~~eeviafGDs~NDi~Mlk~ 552 (591)
....|.+.-||..++.+++.. |++.+.+++||||.||+-....
T Consensus 142 C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~ 187 (234)
T PF06888_consen 142 CSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR 187 (234)
T ss_pred CCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc
Confidence 346678889999999999874 7888999999999999976654
No 146
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=98.14 E-value=3.2e-05 Score=82.02 Aligned_cols=44 Identities=25% Similarity=0.278 Sum_probs=37.8
Q ss_pred CCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCce-EEe
Q 007731 516 GTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLG-IAL 559 (591)
Q Consensus 516 gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~g-VAm 559 (591)
+..|...+..+++.++++++++++|||+.+|+...+.+|+. |.+
T Consensus 103 rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v 147 (354)
T PRK05446 103 RKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRY 147 (354)
T ss_pred CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEE
Confidence 35567788888899999999999999999999999999974 444
No 147
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=98.14 E-value=1.6e-05 Score=94.75 Aligned_cols=66 Identities=29% Similarity=0.435 Sum_probs=51.5
Q ss_pred CHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEec-CCcHHHHhhcceecCCCChHHHHHHHH
Q 007731 518 SKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALS-NGSEKAKAVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 518 sKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmg-NA~~elk~~Ad~Vt~s~~edGVa~~L~ 587 (591)
.|..-++.+.+. | .-|.+.|||.||.+|++.|++||+|+ ++.+..|+.||.|..+.+=.-+..+++
T Consensus 626 qK~~IV~~lq~~-g---~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~ 692 (917)
T COG0474 626 QKARIVEALQKS-G---HVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVV 692 (917)
T ss_pred HHHHHHHHHHhC-C---CEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHH
Confidence 355555555443 5 47999999999999999999999998 489999999999887666555555554
No 148
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.12 E-value=3.1e-05 Score=81.52 Aligned_cols=55 Identities=15% Similarity=0.280 Sum_probs=44.8
Q ss_pred CceEEEEecCCCccCCC---C--------CCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHh
Q 007731 318 KFRYIFCDMDGTLLNSQ---S--------KISLTTAKALKEALSRGLKVVVATGKTRPAVISALKK 372 (591)
Q Consensus 318 ~iKlI~fDLDGTLld~~---~--------~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~ 372 (591)
.+|+|++|+|+||.... . ...+...++|+.|.++|+.+++||..+...+...++.
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 47999999999998641 1 2347899999999999999999999988777766654
No 149
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=98.11 E-value=1.7e-05 Score=75.92 Aligned_cols=57 Identities=19% Similarity=0.211 Sum_probs=45.9
Q ss_pred ceEEEEecCCCccCCCC--------------------------CCCHHHHHHHHHHHhcCCeEEEEcCC-ChhHHHHHHH
Q 007731 319 FRYIFCDMDGTLLNSQS--------------------------KISLTTAKALKEALSRGLKVVVATGK-TRPAVISALK 371 (591)
Q Consensus 319 iKlI~fDLDGTLld~~~--------------------------~is~~~~eaL~~L~~~Gi~vviaTGR-s~~~~~~~l~ 371 (591)
.|+++||+|+||.+... .+.+...+.|+.|+++|++++++|+. ....+..++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~ 81 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILG 81 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHH
Confidence 58999999999997421 13478899999999999999999988 7777777777
Q ss_pred hcCC
Q 007731 372 KVDL 375 (591)
Q Consensus 372 ~lgl 375 (591)
.+++
T Consensus 82 ~~~l 85 (174)
T TIGR01685 82 TFEI 85 (174)
T ss_pred hCCc
Confidence 7665
No 150
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.09 E-value=3.1e-05 Score=92.22 Aligned_cols=66 Identities=35% Similarity=0.464 Sum_probs=52.8
Q ss_pred CHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEec-CCcHHHHhhcceecCCCChHHHHHHHH
Q 007731 518 SKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALS-NGSEKAKAVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 518 sKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmg-NA~~elk~~Ad~Vt~s~~edGVa~~L~ 587 (591)
.|..-++.+. ..| +.|+++||+.||.++++.|++||+|| ++.+..++.||++..+++=..+.++++
T Consensus 605 ~K~~iv~~lq-~~g---~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~ 671 (884)
T TIGR01522 605 HKMKIVKALQ-KRG---DVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIE 671 (884)
T ss_pred HHHHHHHHHH-HCC---CEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHH
Confidence 4555555543 333 68999999999999999999999998 578888899999998777777777664
No 151
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.03 E-value=1.1e-05 Score=77.58 Aligned_cols=33 Identities=33% Similarity=0.557 Sum_probs=29.3
Q ss_pred CHHHHHHHH---HHHcCCCCCcEEEEecChhhHHHHH
Q 007731 518 SKGSGVKML---LDHLGVSTKEIMAIGDGENDVEMLE 551 (591)
Q Consensus 518 sKg~AL~~L---~e~lgI~~eeviafGDs~NDi~Mlk 551 (591)
+|...++.+ ... +++...++++|||.||++|++
T Consensus 157 ~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 688999988 555 788899999999999999986
No 152
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=97.95 E-value=9.5e-05 Score=69.04 Aligned_cols=60 Identities=23% Similarity=0.289 Sum_probs=50.5
Q ss_pred CCCceEEEEecCCCccCCC-CCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 316 KPKFRYIFCDMDGTLLNSQ-SKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 316 ~~~iKlI~fDLDGTLld~~-~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
...+|.|++|+|.||+..+ ...+++.++.+.++.++|++++++|..+...+..+.+.+|+
T Consensus 25 ~~Gikgvi~DlDNTLv~wd~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 25 AHGIKGVILDLDNTLVPWDNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred HcCCcEEEEeccCceecccCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 3468999999999999865 46899999999999999999999998777666666666665
No 153
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=97.95 E-value=1.4e-05 Score=74.84 Aligned_cols=84 Identities=18% Similarity=0.230 Sum_probs=56.9
Q ss_pred cccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhH
Q 007731 468 ATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDV 547 (591)
Q Consensus 468 ~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi 547 (591)
....+...++++.+........+.+.- ...+..+.+. +-......+...++.+++.+|++++++++|||+..|+
T Consensus 90 ~~~~~~~~i~Sn~~~~~~~~~l~~~~~--~~~f~~i~~~----~~~~~~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~ 163 (176)
T PF13419_consen 90 KAKGIPLVIVSNGSRERIERVLERLGL--DDYFDEIISS----DDVGSRKPDPDAYRRALEKLGIPPEEILFVGDSPSDV 163 (176)
T ss_dssp HHTTSEEEEEESSEHHHHHHHHHHTTH--GGGCSEEEEG----GGSSSSTTSHHHHHHHHHHHTSSGGGEEEEESSHHHH
T ss_pred ccccceeEEeecCCccccccccccccc--cccccccccc----chhhhhhhHHHHHHHHHHHcCCCcceEEEEeCCHHHH
Confidence 345677777777665544333333321 1223333333 2233345667999999999999999999999999999
Q ss_pred HHHHHCCceE
Q 007731 548 EMLELASLGI 557 (591)
Q Consensus 548 ~Mlk~ag~gV 557 (591)
.+.+.+|+..
T Consensus 164 ~~A~~~G~~~ 173 (176)
T PF13419_consen 164 EAAKEAGIKT 173 (176)
T ss_dssp HHHHHTTSEE
T ss_pred HHHHHcCCeE
Confidence 9999999743
No 154
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=97.92 E-value=3.5e-05 Score=71.83 Aligned_cols=34 Identities=18% Similarity=0.177 Sum_probs=28.7
Q ss_pred HHHHHcCCCCCcEEEEecChhhHHHHHHCCceEE
Q 007731 525 MLLDHLGVSTKEIMAIGDGENDVEMLELASLGIA 558 (591)
Q Consensus 525 ~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVA 558 (591)
+.++.+|+++++|++|||+.+|+.+.+.+|+.|-
T Consensus 106 k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 106 KDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred ecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 4467889999999999999999999887776554
No 155
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=97.91 E-value=0.0015 Score=68.90 Aligned_cols=54 Identities=17% Similarity=0.228 Sum_probs=43.3
Q ss_pred EEEEecCCCccCCCCCCCHHHHHHHHHHHhc----CCeEEEEc---CCChhHHHHHH-HhcCC
Q 007731 321 YIFCDMDGTLLNSQSKISLTTAKALKEALSR----GLKVVVAT---GKTRPAVISAL-KKVDL 375 (591)
Q Consensus 321 lI~fDLDGTLld~~~~is~~~~eaL~~L~~~----Gi~vviaT---GRs~~~~~~~l-~~lgl 375 (591)
.++||+||||+++... -+...++|+.|..+ |..+.+.| |++.......+ +.+|+
T Consensus 2 ~~ifD~DGvL~~g~~~-i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~ 63 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKP-IAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGV 63 (321)
T ss_pred EEEEeCcCceECCccc-cHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCC
Confidence 5899999999997655 88889999999988 99998877 55566655544 77776
No 156
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=97.89 E-value=0.00013 Score=82.74 Aligned_cols=67 Identities=28% Similarity=0.411 Sum_probs=52.0
Q ss_pred CHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEec-CCcHHHHhhcceecCCCChHHHHHHHHH
Q 007731 518 SKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALS-NGSEKAKAVANVIGASNDEDGVADAIYR 588 (591)
Q Consensus 518 sKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmg-NA~~elk~~Ad~Vt~s~~edGVa~~L~~ 588 (591)
.|-.-++.|.+ .| +-+.+-||+-||-+.||.|++||||| ++.+-.|+++|.|..+.+=.-|..++++
T Consensus 665 HK~kIVeaLq~-~g---eivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEE 732 (972)
T KOG0202|consen 665 HKLKIVEALQS-RG---EVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEE 732 (972)
T ss_pred hHHHHHHHHHh-cC---CEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHH
Confidence 35555655533 33 45677799999999999999999999 9999999999999876665566666553
No 157
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.87 E-value=0.00028 Score=70.98 Aligned_cols=30 Identities=23% Similarity=0.377 Sum_probs=24.1
Q ss_pred HHcCCCCCcEEEEecChhhHHHHHHCCc-eEEecC
Q 007731 528 DHLGVSTKEIMAIGDGENDVEMLELASL-GIALSN 561 (591)
Q Consensus 528 e~lgI~~eeviafGDs~NDi~Mlk~ag~-gVAmgN 561 (591)
+.+++ +++|||+.+|+.+.+.||+ ++.+..
T Consensus 182 ~~~~i----~I~IGDs~~Di~aA~~AGi~~I~v~~ 212 (237)
T PRK11009 182 KKKNI----RIFYGDSDNDITAAREAGARGIRILR 212 (237)
T ss_pred HhcCC----eEEEcCCHHHHHHHHHcCCcEEEEec
Confidence 45555 8999999999999999996 565544
No 158
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=97.85 E-value=1.4e-05 Score=76.06 Aligned_cols=37 Identities=8% Similarity=0.150 Sum_probs=32.4
Q ss_pred CCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHH
Q 007731 516 GTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLEL 552 (591)
Q Consensus 516 gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ 552 (591)
..........+++++|+++++|++|||+..|+...+.
T Consensus 138 ~KP~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 138 YKPDPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred CCCCHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhc
Confidence 4455788899999999999999999999999988765
No 159
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.83 E-value=0.0006 Score=78.22 Aligned_cols=103 Identities=25% Similarity=0.364 Sum_probs=81.2
Q ss_pred cccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhH
Q 007731 468 ATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDV 547 (591)
Q Consensus 468 ~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi 547 (591)
....+..+++++++......+.+.+. .+.+ +-|+.|. .|.+-++.+.+.- .-++++||+.||-
T Consensus 736 k~~Gi~v~mLTGDn~~aA~svA~~VG------i~~V-----~aev~P~--~K~~~Ik~lq~~~----~~VaMVGDGINDa 798 (951)
T KOG0207|consen 736 KSMGIKVVMLTGDNDAAARSVAQQVG------IDNV-----YAEVLPE--QKAEKIKEIQKNG----GPVAMVGDGINDA 798 (951)
T ss_pred HhcCceEEEEcCCCHHHHHHHHHhhC------cceE-----EeccCch--hhHHHHHHHHhcC----CcEEEEeCCCCcc
Confidence 34568888888888876665555432 2222 4467774 5888888887654 4699999999999
Q ss_pred HHHHHCCceEEecCCcHHHHhhcceecCCCChHHHHHHHH
Q 007731 548 EMLELASLGIALSNGSEKAKAVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 548 ~Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~ 587 (591)
+.|..|++||+|+.+.+-..+.||+|.-.|+=.+|..+|+
T Consensus 799 PALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~ 838 (951)
T KOG0207|consen 799 PALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAID 838 (951)
T ss_pred HHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHH
Confidence 9999999999999999999999999998888778888775
No 160
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=97.81 E-value=0.00012 Score=65.53 Aligned_cols=53 Identities=11% Similarity=0.157 Sum_probs=44.3
Q ss_pred EEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 321 YIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 321 lI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
..+-|+++|+.. .+.+-+++.+.|++|.+. +++++|||-...++.+..+..|+
T Consensus 16 ~~~~~v~~tiat-gGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi 68 (152)
T COG4087 16 SKAGKVLYTIAT-GGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGI 68 (152)
T ss_pred eecceEEEEEcc-CcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCC
Confidence 456788999976 456788899999999998 99999999998888888776655
No 161
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=97.79 E-value=0.00034 Score=84.90 Aligned_cols=66 Identities=29% Similarity=0.348 Sum_probs=52.9
Q ss_pred CCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecCCcHHHHhhcceecCCCChHHHHHHHHH
Q 007731 517 TSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSNGSEKAKAVANVIGASNDEDGVADAIYR 588 (591)
Q Consensus 517 vsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s~~edGVa~~L~~ 588 (591)
-.|..-++.+.+ .| .-|.++|||.||.++|+.|++||||+++. +...|+++..+.+=..|.++|++
T Consensus 788 ~qK~~iV~~lq~-~g---~~V~m~GDG~ND~~ALK~AdVGIam~~~d--as~AA~f~l~~~~~~~I~~~I~e 853 (1054)
T TIGR01657 788 DQKETLVELLQK-LD---YTVGMCGDGANDCGALKQADVGISLSEAE--ASVAAPFTSKLASISCVPNVIRE 853 (1054)
T ss_pred HHHHHHHHHHHh-CC---CeEEEEeCChHHHHHHHhcCcceeecccc--ceeecccccCCCcHHHHHHHHHH
Confidence 458888877654 44 47999999999999999999999999873 44678888877777777777754
No 162
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=97.79 E-value=0.00019 Score=87.16 Aligned_cols=57 Identities=30% Similarity=0.489 Sum_probs=46.2
Q ss_pred CCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecCCcH-HHHhhcceecCC
Q 007731 517 TSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSNGSE-KAKAVANVIGAS 576 (591)
Q Consensus 517 vsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgNA~~-elk~~Ad~Vt~s 576 (591)
..|+.-++.+.+..| .-|+++|||.||.+|++.|++||++.+... .++..||+++.+
T Consensus 754 ~qK~~IV~~lk~~~~---~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~ 811 (1057)
T TIGR01652 754 SQKADVVRLVKKSTG---KTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQ 811 (1057)
T ss_pred HHHHHHHHHHHhcCC---CeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhh
Confidence 579999988866544 479999999999999999999998865443 467789998754
No 163
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.77 E-value=9e-05 Score=70.65 Aligned_cols=62 Identities=26% Similarity=0.258 Sum_probs=45.5
Q ss_pred eecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecC--CcHHHHhhcceec
Q 007731 511 EIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSN--GSEKAKAVANVIG 574 (591)
Q Consensus 511 EI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgN--A~~elk~~Ad~Vt 574 (591)
+-+..+-.|+.+|+.+++ +.+...+++|||+.||++|+..+..-++.+. -.+.+|..|++.+
T Consensus 152 ~ptsdsggKa~~i~~lrk--~~~~~~~~mvGDGatDlea~~pa~afi~~~g~~~r~~vk~nak~~~ 215 (227)
T KOG1615|consen 152 EPTSDSGGKAEVIALLRK--NYNYKTIVMVGDGATDLEAMPPADAFIGFGGNVIREGVKANAKWYV 215 (227)
T ss_pred CccccCCccHHHHHHHHh--CCChheeEEecCCccccccCCchhhhhccCCceEcHhhHhccHHHH
Confidence 344455689999999988 6777999999999999999988654444432 1466666666543
No 164
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=97.76 E-value=0.00029 Score=68.74 Aligned_cols=49 Identities=12% Similarity=0.224 Sum_probs=41.9
Q ss_pred cCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCc-eEEecC
Q 007731 513 VPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASL-GIALSN 561 (591)
Q Consensus 513 ~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~-gVAmgN 561 (591)
+.....+......+++++|++++++++|||+..|+...+.+|+ +|.+.+
T Consensus 137 ~~~~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~ 186 (199)
T PRK09456 137 LGMRKPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVTD 186 (199)
T ss_pred cCCCCCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecC
Confidence 3445677899999999999999999999999999999999997 444444
No 165
>PLN02887 hydrolase family protein
Probab=97.73 E-value=1.3e-05 Score=90.14 Aligned_cols=78 Identities=15% Similarity=0.011 Sum_probs=59.9
Q ss_pred HHHhhhccCCC-CCCCccchhhcccCCCCccccccCCCCCCCCCCCCcc-cccccccccccccccccccchhhhhhhhhh
Q 007731 19 MARIISRATPL-PVTRTSYAAISFLNSPSISYKTHRLDASSPSNSSPLF-GRGFRVLCRREEESVVRSSRKVFAEQRGYR 96 (591)
Q Consensus 19 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (591)
|++.+||++++ |...|+++++ .|+|+|+...+.+|+| |+++ |.+.++++.+++||++|++|.|.||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (580)
T PLN02887 1 MLPMLSRVSLPLRLPRLFPAAA-----------REMPPAARLLLQPSSLSFSPK-TSNFNRLDVTSTEFSSFRKGFHAFR 68 (580)
T ss_pred CCccccccCCCCCCCCCCcccc-----------CCCChhhhhhcCccccccCCC-CCCCccccCCCCchhhHHHHHHHHh
Confidence 55667777655 5556666665 2667777777778887 9999 9999999999999999999999999
Q ss_pred --hcccCCCccccc
Q 007731 97 --KARRRVAKSKQK 108 (591)
Q Consensus 97 --~~~~~~~~~~~~ 108 (591)
|.|++....++.
T Consensus 69 ~~~~~~~~~~~~~~ 82 (580)
T PLN02887 69 STKPRGRVWAAHRG 82 (580)
T ss_pred hcCccccchhhhcc
Confidence 777764444443
No 166
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=97.68 E-value=0.00051 Score=65.88 Aligned_cols=44 Identities=18% Similarity=0.263 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCc-eEEecC
Q 007731 518 SKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASL-GIALSN 561 (591)
Q Consensus 518 sKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~-gVAmgN 561 (591)
.|..-+..+++++++++...++|||...|+.....+|+ ++.+.+
T Consensus 106 P~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~ 150 (181)
T COG0241 106 PKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLT 150 (181)
T ss_pred CChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEc
Confidence 45566778889999999999999999999999999986 455443
No 167
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=97.65 E-value=5.1e-05 Score=72.21 Aligned_cols=41 Identities=20% Similarity=0.318 Sum_probs=37.0
Q ss_pred CCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCce
Q 007731 516 GTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLG 556 (591)
Q Consensus 516 gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~g 556 (591)
+..+....+.+++++|++++++++|||+..|+.+.+.+|+.
T Consensus 139 ~KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 139 GKPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred CCCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 44457889999999999999999999999999999999974
No 168
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.62 E-value=0.0012 Score=67.74 Aligned_cols=38 Identities=18% Similarity=0.273 Sum_probs=32.7
Q ss_pred CCCHHHHHH-HHHHHcC--CCCCcEEEEecChhhHHHHHHC
Q 007731 516 GTSKGSGVK-MLLDHLG--VSTKEIMAIGDGENDVEMLELA 553 (591)
Q Consensus 516 gvsKg~AL~-~L~e~lg--I~~eeviafGDs~NDi~Mlk~a 553 (591)
..+|...+. ..++.++ +++++|+++|||.||+.|....
T Consensus 190 ~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 190 TFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred ccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 367887766 5788888 8899999999999999998876
No 169
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=97.59 E-value=0.00032 Score=78.19 Aligned_cols=46 Identities=26% Similarity=0.348 Sum_probs=38.0
Q ss_pred CCceEEEEecCCCccCCCC------------CCCHHHHHHHHHHHhcCCeEEEEcCCC
Q 007731 317 PKFRYIFCDMDGTLLNSQS------------KISLTTAKALKEALSRGLKVVVATGKT 362 (591)
Q Consensus 317 ~~iKlI~fDLDGTLld~~~------------~is~~~~eaL~~L~~~Gi~vviaTGRs 362 (591)
...|+++||+||||+.+.+ -+.+...++|+.|.++|++++|+|..+
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~ 223 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQG 223 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCc
Confidence 3458999999999997542 135788999999999999999999764
No 170
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=97.50 E-value=0.00035 Score=83.27 Aligned_cols=51 Identities=31% Similarity=0.426 Sum_probs=41.4
Q ss_pred eeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecCC
Q 007731 509 MLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSNG 562 (591)
Q Consensus 509 ~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgNA 562 (591)
.+.+.....-|+.-++.+.+..+. .++||||+.||+.|++.|++||.++..
T Consensus 772 ViCCR~sPlQKA~Vv~lVk~~~~~---~TLAIGDGANDVsMIQ~AhVGVGIsG~ 822 (1151)
T KOG0206|consen 772 VICCRVSPLQKALVVKLVKKGLKA---VTLAIGDGANDVSMIQEAHVGVGISGQ 822 (1151)
T ss_pred EEEccCCHHHHHHHHHHHHhcCCc---eEEEeeCCCccchheeeCCcCeeeccc
Confidence 445555667799999998666654 899999999999999999998888654
No 171
>PLN02811 hydrolase
Probab=97.47 E-value=0.0011 Score=65.73 Aligned_cols=63 Identities=13% Similarity=0.104 Sum_probs=46.8
Q ss_pred CCCCHHHHHHHHHHHcC---CCCCcEEEEecChhhHHHHHHCCc-eEEecCC--cHHHHhhcceecCCC
Q 007731 515 PGTSKGSGVKMLLDHLG---VSTKEIMAIGDGENDVEMLELASL-GIALSNG--SEKAKAVANVIGASN 577 (591)
Q Consensus 515 ~gvsKg~AL~~L~e~lg---I~~eeviafGDs~NDi~Mlk~ag~-gVAmgNA--~~elk~~Ad~Vt~s~ 577 (591)
.+..+...+..+++++| +++++|++|||+..|+.+.+.+|+ +|.+.++ .......+++++.+.
T Consensus 135 ~~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~ 203 (220)
T PLN02811 135 QGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSL 203 (220)
T ss_pred CCCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCH
Confidence 34566788999999996 999999999999999999999996 5555443 222233466665543
No 172
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.44 E-value=0.0013 Score=65.00 Aligned_cols=41 Identities=22% Similarity=0.324 Sum_probs=34.6
Q ss_pred HHHHHHHHHHcCCCCCcEEEEecCh-hhHHHHHHCCc-eEEec
Q 007731 520 GSGVKMLLDHLGVSTKEIMAIGDGE-NDVEMLELASL-GIALS 560 (591)
Q Consensus 520 g~AL~~L~e~lgI~~eeviafGDs~-NDi~Mlk~ag~-gVAmg 560 (591)
...-+++++++|++++++++|||+. ||+...+.+|. +|-+.
T Consensus 157 ~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~ 199 (229)
T COG1011 157 PEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWIN 199 (229)
T ss_pred cHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEEC
Confidence 5778899999999999999999985 78799999997 44443
No 173
>PTZ00445 p36-lilke protein; Provisional
Probab=97.38 E-value=0.003 Score=61.77 Aligned_cols=51 Identities=18% Similarity=0.216 Sum_probs=43.6
Q ss_pred ecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCc-eEEecCC
Q 007731 512 IVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASL-GIALSNG 562 (591)
Q Consensus 512 I~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~-gVAmgNA 562 (591)
+.|....|..=++.+++++|+.++++++|=|+..-++..+..|+ ++.+.++
T Consensus 156 ~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 156 DAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred cCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence 45666677788899999999999999999999999999999996 6666543
No 174
>PLN03190 aminophospholipid translocase; Provisional
Probab=97.37 E-value=0.0018 Score=78.94 Aligned_cols=41 Identities=27% Similarity=0.319 Sum_probs=37.3
Q ss_pred CCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 335 SKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 335 ~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
..+.+.+.+++++++++|+++++.||.....+..+....++
T Consensus 725 D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~L 765 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKL 765 (1178)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCC
Confidence 45788999999999999999999999999999999888776
No 175
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=97.25 E-value=0.013 Score=56.71 Aligned_cols=58 Identities=21% Similarity=0.284 Sum_probs=44.3
Q ss_pred CCceEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCCh---hHHHHHHHhcCC
Q 007731 317 PKFRYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTR---PAVISALKKVDL 375 (591)
Q Consensus 317 ~~iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~---~~~~~~l~~lgl 375 (591)
+.+|-+..||-|||..++.. .+...++++.|+.++.+|=++|.-+. ..+.+-+..+|+
T Consensus 5 ~~v~gvLlDlSGtLh~e~~a-vpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 5 RAVKGVLLDLSGTLHIEDAA-VPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred cccceEEEeccceEeccccc-CCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 46899999999999998774 45568999999988888877765544 455555666665
No 176
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=97.19 E-value=0.0011 Score=62.89 Aligned_cols=108 Identities=19% Similarity=0.209 Sum_probs=69.2
Q ss_pred HHHHHHHHHHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCeeEEEEecChhhHHHhHHHHH
Q 007731 413 FCREAYQYSWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQKLIFLDTAEGVATTIRPYW 492 (591)
Q Consensus 413 ~v~eil~~l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki~~~~~~~~~~~~l~~~l 492 (591)
..++.+++++++++++.+.+....+ ++. +-+..+...+.+.++-++.+.....
T Consensus 77 ~fKef~e~ike~di~fiVvSsGm~~------fI~--------------~lfe~ivgke~i~~idi~sn~~~ih------- 129 (220)
T COG4359 77 GFKEFVEWIKEHDIPFIVVSSGMDP------FIY--------------PLFEGIVGKERIYCIDIVSNNDYIH------- 129 (220)
T ss_pred cHHHHHHHHHHcCCCEEEEeCCCch------HHH--------------HHHHhhccccceeeeEEeecCceEc-------
Confidence 4578899999999999887765322 111 1123334445566665554332210
Q ss_pred HHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEe
Q 007731 493 SEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIAL 559 (591)
Q Consensus 493 ~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAm 559 (591)
..+...+.... -.+-|.+|+..++.+.+.. +.++++|||..|++..+.+++.+|=
T Consensus 130 ---~dg~h~i~~~~-----ds~fG~dK~~vI~~l~e~~----e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 130 ---IDGQHSIKYTD-----DSQFGHDKSSVIHELSEPN----ESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred ---CCCceeeecCC-----ccccCCCcchhHHHhhcCC----ceEEEecCCcccccHhhhhhhHhhH
Confidence 01112222222 2456899999999987744 6799999999999999999988774
No 177
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=97.16 E-value=0.00058 Score=59.48 Aligned_cols=53 Identities=30% Similarity=0.407 Sum_probs=41.2
Q ss_pred EEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCC---hhHHHHHHHhcCC
Q 007731 322 IFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKT---RPAVISALKKVDL 375 (591)
Q Consensus 322 I~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs---~~~~~~~l~~lgl 375 (591)
++||+||||.+.+. +-+...++|+.|+++|.+++++|..+ .....+.++.+|+
T Consensus 1 ~l~D~dGvl~~g~~-~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi 56 (101)
T PF13344_consen 1 FLFDLDGVLYNGNE-PIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGI 56 (101)
T ss_dssp EEEESTTTSEETTE-E-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTT
T ss_pred CEEeCccEeEeCCC-cCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCc
Confidence 68999999998554 56667999999999999999988554 4455566677776
No 178
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=97.10 E-value=0.0017 Score=63.39 Aligned_cols=53 Identities=26% Similarity=0.485 Sum_probs=43.1
Q ss_pred CeeeecCCCCCHHHHHHHHHHHc---CCCCCcEEEEecChhhH-HHHHHCCceEEec
Q 007731 508 DMLEIVPPGTSKGSGVKMLLDHL---GVSTKEIMAIGDGENDV-EMLELASLGIALS 560 (591)
Q Consensus 508 ~~iEI~p~gvsKg~AL~~L~e~l---gI~~eeviafGDs~NDi-~Mlk~ag~gVAmg 560 (591)
......|++--||..+..+.... |+..+.++++|||.||+ ++++..+.-|||.
T Consensus 153 hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 153 HSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred CccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 34467899999999999887654 78889999999999998 6777777677774
No 179
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=97.05 E-value=0.019 Score=58.73 Aligned_cols=57 Identities=23% Similarity=0.262 Sum_probs=44.9
Q ss_pred CceEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHH---hcCC
Q 007731 318 KFRYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALK---KVDL 375 (591)
Q Consensus 318 ~iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~---~lgl 375 (591)
++-.++||-||.|.. ....-+.+.++++.|++.|-.++++|..+..+.+.+++ .+|+
T Consensus 21 ~~DtfifDcDGVlW~-g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~ 80 (306)
T KOG2882|consen 21 SFDTFIFDCDGVLWL-GEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGF 80 (306)
T ss_pred hcCEEEEcCCcceee-cCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCc
Confidence 467899999999998 45566777888999999999999998777766665554 4554
No 180
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.02 E-value=0.0044 Score=61.97 Aligned_cols=52 Identities=29% Similarity=0.319 Sum_probs=44.9
Q ss_pred HHHHHHHHHHcCCCCCcEEEEecC-hhhHHHHHHCCc-eEEecCCcHHHHhhcc
Q 007731 520 GSGVKMLLDHLGVSTKEIMAIGDG-ENDVEMLELASL-GIALSNGSEKAKAVAN 571 (591)
Q Consensus 520 g~AL~~L~e~lgI~~eeviafGDs-~NDi~Mlk~ag~-gVAmgNA~~elk~~Ad 571 (591)
..--+..++++|+.|++|+.|||+ .||++-.+.+|. ++.|.|+...+++...
T Consensus 171 p~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~~~ 224 (237)
T KOG3085|consen 171 PRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKELEY 224 (237)
T ss_pred hHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhhhhh
Confidence 466788999999999999999997 599999999995 8999998877776543
No 181
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=97.01 E-value=0.0033 Score=71.74 Aligned_cols=66 Identities=29% Similarity=0.419 Sum_probs=47.1
Q ss_pred CCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecCC-cHHHHhhcceecCCCChHHHHHHH
Q 007731 517 TSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSNG-SEKAKAVANVIGASNDEDGVADAI 586 (591)
Q Consensus 517 vsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgNA-~~elk~~Ad~Vt~s~~edGVa~~L 586 (591)
.+|-.-++-|.+ .| +=+.+-||+.||-+.|+.|++|.|||-+ .+.+|+.+|.|+-+.+=..|..++
T Consensus 725 ~DK~lLVk~L~~-~g---~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v 791 (1034)
T KOG0204|consen 725 NDKHLLVKGLIK-QG---EVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAV 791 (1034)
T ss_pred chHHHHHHHHHh-cC---cEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHH
Confidence 355555555542 22 3355569999999999999999999975 567788899887665555555554
No 182
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=96.99 E-value=0.0025 Score=70.99 Aligned_cols=45 Identities=40% Similarity=0.600 Sum_probs=36.8
Q ss_pred cCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEec
Q 007731 513 VPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALS 560 (591)
Q Consensus 513 ~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmg 560 (591)
.-...-|+.-++.+.++-| ..+.+||||.||++|++.|++||.+.
T Consensus 763 RctPtQKA~v~~llq~~t~---krvc~IGDGGNDVsMIq~A~~GiGI~ 807 (1051)
T KOG0210|consen 763 RCTPTQKAQVVRLLQKKTG---KRVCAIGDGGNDVSMIQAADVGIGIV 807 (1051)
T ss_pred ecChhHHHHHHHHHHHhhC---ceEEEEcCCCccchheeecccceeee
Confidence 3344679888888888777 58999999999999999998877663
No 183
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=96.97 E-value=0.0016 Score=53.26 Aligned_cols=62 Identities=21% Similarity=0.317 Sum_probs=48.7
Q ss_pred CCHHHHHHHHHHHcCCCCCcEEEEecC-hhhHHHHHHCCc-eEEecCCc---HHHH---hhcceecCCCC
Q 007731 517 TSKGSGVKMLLDHLGVSTKEIMAIGDG-ENDVEMLELASL-GIALSNGS---EKAK---AVANVIGASND 578 (591)
Q Consensus 517 vsKg~AL~~L~e~lgI~~eeviafGDs-~NDi~Mlk~ag~-gVAmgNA~---~elk---~~Ad~Vt~s~~ 578 (591)
......+..+++.++++++++++|||+ ..|+.+.+.+|+ +|.|..+. +++. ..+++|+.+..
T Consensus 4 KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~ 73 (75)
T PF13242_consen 4 KPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLK 73 (75)
T ss_dssp TTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGG
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHH
Confidence 345677889999999999999999999 999999999996 67776532 3333 35888877644
No 184
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=96.94 E-value=0.0069 Score=60.49 Aligned_cols=58 Identities=17% Similarity=0.265 Sum_probs=45.7
Q ss_pred CceEEEEecCCCccCCC--------------------------CCCCHHHHHHHHHHHhcCCeEEEEcCCChhH---HHH
Q 007731 318 KFRYIFCDMDGTLLNSQ--------------------------SKISLTTAKALKEALSRGLKVVVATGKTRPA---VIS 368 (591)
Q Consensus 318 ~iKlI~fDLDGTLld~~--------------------------~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~---~~~ 368 (591)
..-+++||+|.|++++. ...-+.++++++.++++|+.|+++|||+... ...
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~ 155 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLD 155 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHH
Confidence 34689999999999742 1134678999999999999999999999655 456
Q ss_pred HHHhcCC
Q 007731 369 ALKKVDL 375 (591)
Q Consensus 369 ~l~~lgl 375 (591)
.+...|+
T Consensus 156 nL~~~G~ 162 (229)
T TIGR01675 156 NLINAGF 162 (229)
T ss_pred HHHHcCC
Confidence 6666776
No 185
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=96.90 E-value=0.0019 Score=73.54 Aligned_cols=50 Identities=30% Similarity=0.444 Sum_probs=40.5
Q ss_pred HHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecC-CcHHHHhhcceecCCCC
Q 007731 526 LLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSN-GSEKAKAVANVIGASND 578 (591)
Q Consensus 526 L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgN-A~~elk~~Ad~Vt~s~~ 578 (591)
-|+++| +=|.+.||+.||-+.|+.|++|||||- +++..|+.||.|.-+.+
T Consensus 700 ~cQr~G---aiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDN 750 (1019)
T KOG0203|consen 700 GCQRQG---AIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDN 750 (1019)
T ss_pred hhhhcC---cEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCc
Confidence 377777 356777999999999999999999985 56778888998874433
No 186
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=96.89 E-value=0.041 Score=58.03 Aligned_cols=52 Identities=21% Similarity=0.258 Sum_probs=43.9
Q ss_pred CceEEEEecCCCccCCCCCC--CHHHHHHHHHHHhcCCeEEEEcCCChhHHHHH
Q 007731 318 KFRYIFCDMDGTLLNSQSKI--SLTTAKALKEALSRGLKVVVATGKTRPAVISA 369 (591)
Q Consensus 318 ~iKlI~fDLDGTLld~~~~i--s~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~ 369 (591)
..|+|-||=|+||.+++..+ +...+.-|-+|.++|+.|+|+|.-.+....++
T Consensus 146 ~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~LL~~gv~VgIVTAAGY~~a~kY 199 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDGASLEPDNPVIPRIIKLLRRGVKVGIVTAAGYPGAEKY 199 (408)
T ss_pred CceEEEEcCCcccccCCCCCCCCchHHHHHHHHHhcCCeEEEEeCCCCCChHHH
Confidence 67999999999999988877 66788888889999999999997776655443
No 187
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=96.84 E-value=0.0075 Score=67.43 Aligned_cols=56 Identities=18% Similarity=0.279 Sum_probs=44.0
Q ss_pred ceEEEEecCCCccC---CCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcC
Q 007731 319 FRYIFCDMDGTLLN---SQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVD 374 (591)
Q Consensus 319 iKlI~fDLDGTLld---~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lg 374 (591)
.+.+++=.|++++. -...+.+...++++.|++.|+.++++||.....+..+.+.+|
T Consensus 327 ~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lg 385 (499)
T TIGR01494 327 LRVLAVASKETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELG 385 (499)
T ss_pred CEEEEEEECCeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC
Confidence 34555557776664 234578889999999999999999999999999888887654
No 188
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=96.79 E-value=0.0072 Score=59.03 Aligned_cols=81 Identities=14% Similarity=0.189 Sum_probs=52.5
Q ss_pred EEEEecChhhHHHhHHHHHHHhccCCeEEEEecC------CeeeecCCCCCHHHHHHHHHHHcCCC-CCcEEEEecChhh
Q 007731 474 KLIFLDTAEGVATTIRPYWSEATKDRANVVQAIP------DMLEIVPPGTSKGSGVKMLLDHLGVS-TKEIMAIGDGEND 546 (591)
Q Consensus 474 ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~------~~iEI~p~gvsKg~AL~~L~e~lgI~-~eeviafGDs~ND 546 (591)
|++|++.....+..+...+. +.+.++.+.+.. .-+-+.|. ..|.+..++..|++ +.++++|-||.+-
T Consensus 117 k~~FTNa~k~HA~r~Lk~LG--ieDcFegii~~e~~np~~~~~vcKP~----~~afE~a~k~agi~~p~~t~FfDDS~~N 190 (244)
T KOG3109|consen 117 KWIFTNAYKVHAIRILKKLG--IEDCFEGIICFETLNPIEKTVVCKPS----EEAFEKAMKVAGIDSPRNTYFFDDSERN 190 (244)
T ss_pred EEEecCCcHHHHHHHHHHhC--hHHhccceeEeeccCCCCCceeecCC----HHHHHHHHHHhCCCCcCceEEEcCchhh
Confidence 77777766655544444332 112222222221 22223333 47899999999998 9999999999999
Q ss_pred HHHHHHCCc-eEEec
Q 007731 547 VEMLELASL-GIALS 560 (591)
Q Consensus 547 i~Mlk~ag~-gVAmg 560 (591)
+.-.+..|. +|.++
T Consensus 191 I~~ak~vGl~tvlv~ 205 (244)
T KOG3109|consen 191 IQTAKEVGLKTVLVG 205 (244)
T ss_pred HHHHHhccceeEEEE
Confidence 999999995 55554
No 189
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=96.63 E-value=0.03 Score=55.71 Aligned_cols=64 Identities=20% Similarity=0.140 Sum_probs=47.9
Q ss_pred cCCCCCHHHHHHHHHHHcCCCC-CcEEEEecChhhHHHHHHCCceEEe-cC--CcHHHHhhcceecCC
Q 007731 513 VPPGTSKGSGVKMLLDHLGVST-KEIMAIGDGENDVEMLELASLGIAL-SN--GSEKAKAVANVIGAS 576 (591)
Q Consensus 513 ~p~gvsKg~AL~~L~e~lgI~~-eeviafGDs~NDi~Mlk~ag~gVAm-gN--A~~elk~~Ad~Vt~s 576 (591)
+..|..........++.+|.++ +.|++|.|+.+-+.+.+.||.-+.| .+ -.......++.+..+
T Consensus 147 v~~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~ 214 (222)
T KOG2914|consen 147 VKNGKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILES 214 (222)
T ss_pred ccCCCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceeccc
Confidence 3445666778888889999998 9999999999999999999975444 33 334455556666544
No 190
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=96.57 E-value=0.0017 Score=61.29 Aligned_cols=42 Identities=36% Similarity=0.639 Sum_probs=32.3
Q ss_pred eEEEEecCCCccCCCC--C----------CCHHHHHHHHHHHhcCCeEEEEcCC
Q 007731 320 RYIFCDMDGTLLNSQS--K----------ISLTTAKALKEALSRGLKVVVATGK 361 (591)
Q Consensus 320 KlI~fDLDGTLld~~~--~----------is~~~~eaL~~L~~~Gi~vviaTGR 361 (591)
|+++||+||||+.+.. . +.+.+.++|+++.+.|+.++|+|-.
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ 54 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKKGYKIVIVTNQ 54 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEeCc
Confidence 6899999999996532 1 3457999999999999999999954
No 191
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=96.49 E-value=0.0046 Score=58.01 Aligned_cols=53 Identities=21% Similarity=0.247 Sum_probs=41.7
Q ss_pred EEEEecCCCccCCCC-----------CCCHHHHHHHHHHHhcCCeEEEEcCCChhHH---HHHHHhc
Q 007731 321 YIFCDMDGTLLNSQS-----------KISLTTAKALKEALSRGLKVVVATGKTRPAV---ISALKKV 373 (591)
Q Consensus 321 lI~fDLDGTLld~~~-----------~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~---~~~l~~l 373 (591)
+|++|+||||+.++. ...+...+.++.+.++|++++..|+|+.... +.++...
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHH
Confidence 489999999998751 2346788999999999999999999997543 3455544
No 192
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=96.38 E-value=0.018 Score=62.72 Aligned_cols=44 Identities=32% Similarity=0.595 Sum_probs=39.0
Q ss_pred CcEEEEecChhhHHHHHHCCceEEecCCcHHHHhhcceecCCCC
Q 007731 535 KEIMAIGDGENDVEMLELASLGIALSNGSEKAKAVANVIGASND 578 (591)
Q Consensus 535 eeviafGDs~NDi~Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s~~ 578 (591)
.-+.+.||+.||.+.+..|++|+||.++....|+.++.|--+.+
T Consensus 510 rlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAkEAaNMVDLDS~ 553 (681)
T COG2216 510 RLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSN 553 (681)
T ss_pred cEEEEcCCCCCcchhhhhcchhhhhccccHHHHHhhcccccCCC
Confidence 45888999999999999999999999999999999998764443
No 193
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=96.33 E-value=0.034 Score=61.97 Aligned_cols=40 Identities=20% Similarity=0.431 Sum_probs=32.2
Q ss_pred CHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecC
Q 007731 518 SKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSN 561 (591)
Q Consensus 518 sKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgN 561 (591)
.|...++ +.+|.+... ++.|||.||.+||+.|+.+++|..
T Consensus 176 ~Kv~rl~---~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 176 HKRDAVL---KEFGDALPD-LGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred HHHHHHH---HHhCCCCce-EEEECCccHHHHHHhCCccEEeCC
Confidence 3666665 556655445 899999999999999999999976
No 194
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=96.32 E-value=0.025 Score=53.81 Aligned_cols=61 Identities=18% Similarity=0.160 Sum_probs=47.9
Q ss_pred cCCCceEEEEecCCCccC-CCCCCCHHHHHHHHHHHhcCC--eEEEEcCCC-------hhHHHHHHHhcCC
Q 007731 315 YKPKFRYIFCDMDGTLLN-SQSKISLTTAKALKEALSRGL--KVVVATGKT-------RPAVISALKKVDL 375 (591)
Q Consensus 315 ~~~~iKlI~fDLDGTLld-~~~~is~~~~eaL~~L~~~Gi--~vviaTGRs-------~~~~~~~l~~lgl 375 (591)
....||+|+||+|.||+. ....++++..+.++++++.+. .++|+|-.. ...+..+-+.+|+
T Consensus 37 k~~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI 107 (168)
T PF09419_consen 37 KKKGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI 107 (168)
T ss_pred hhcCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC
Confidence 445699999999999985 455799999999999998865 488887652 4556666677776
No 195
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=96.32 E-value=0.12 Score=49.37 Aligned_cols=53 Identities=23% Similarity=0.443 Sum_probs=36.8
Q ss_pred CeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCc-eEEecCC
Q 007731 508 DMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASL-GIALSNG 562 (591)
Q Consensus 508 ~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~-gVAmgNA 562 (591)
.++||.|. +|-.-++.+.+..||+.+++++|=|...-++-.+.-|+ +|-+.|+
T Consensus 100 ~~~eI~~g--sK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~G 153 (169)
T PF12689_consen 100 DYLEIYPG--SKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDG 153 (169)
T ss_dssp CEEEESSS---HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS
T ss_pred chhheecC--chHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCC
Confidence 45899995 99999999999999999999999998766666666665 4444443
No 196
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=96.07 E-value=0.013 Score=59.90 Aligned_cols=59 Identities=24% Similarity=0.317 Sum_probs=44.9
Q ss_pred CceEEEEecCCCccCCCC--------------------------CCCHHHHHHHHHHHhcCCeEEEEcCCChhH---HHH
Q 007731 318 KFRYIFCDMDGTLLNSQS--------------------------KISLTTAKALKEALSRGLKVVVATGKTRPA---VIS 368 (591)
Q Consensus 318 ~iKlI~fDLDGTLld~~~--------------------------~is~~~~eaL~~L~~~Gi~vviaTGRs~~~---~~~ 368 (591)
+..+|+||+|+|+++... .+-+...+.|+.+.++|+.++++|+|+... ...
T Consensus 74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~ 153 (266)
T TIGR01533 74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLK 153 (266)
T ss_pred CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHH
Confidence 346999999999997531 123567889999999999999999998543 446
Q ss_pred HHHhcCCC
Q 007731 369 ALKKVDLV 376 (591)
Q Consensus 369 ~l~~lgl~ 376 (591)
.++.+|++
T Consensus 154 ~Lkk~Gi~ 161 (266)
T TIGR01533 154 NLKRFGFP 161 (266)
T ss_pred HHHHcCcC
Confidence 67777773
No 197
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=95.43 E-value=0.087 Score=53.72 Aligned_cols=58 Identities=26% Similarity=0.353 Sum_probs=45.2
Q ss_pred eEEEEecCCCccCCCCC---CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCC
Q 007731 320 RYIFCDMDGTLLNSQSK---ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVG 377 (591)
Q Consensus 320 KlI~fDLDGTLld~~~~---is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~ 377 (591)
.+|+||||.||+.+.+. -.+...+.|.+|++.|..+++=|--+..-+..-++.+++..
T Consensus 123 hVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~ 183 (297)
T PF05152_consen 123 HVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEG 183 (297)
T ss_pred cEEEEECCCcccccCCccccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCcc
Confidence 58999999999987664 36888999999999997776655445566777777777754
No 198
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=95.38 E-value=0.055 Score=55.21 Aligned_cols=56 Identities=23% Similarity=0.358 Sum_probs=41.0
Q ss_pred eEEEEecCCCccCCC---------------------------CCCCHHHHHHHHHHHhcCCeEEEEcCCChhH---HHHH
Q 007731 320 RYIFCDMDGTLLNSQ---------------------------SKISLTTAKALKEALSRGLKVVVATGKTRPA---VISA 369 (591)
Q Consensus 320 KlI~fDLDGTLld~~---------------------------~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~---~~~~ 369 (591)
-+++||+|+|++++- ...-+.+++.++.++++|++|+++|||+-.. ....
T Consensus 102 dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~N 181 (275)
T TIGR01680 102 DTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEAN 181 (275)
T ss_pred CEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHH
Confidence 689999999999421 0123577888999999999999999998533 2334
Q ss_pred HHhcCC
Q 007731 370 LKKVDL 375 (591)
Q Consensus 370 l~~lgl 375 (591)
+...|+
T Consensus 182 L~kaGy 187 (275)
T TIGR01680 182 LKKAGY 187 (275)
T ss_pred HHHcCC
Confidence 455565
No 199
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.23 E-value=0.032 Score=54.73 Aligned_cols=70 Identities=30% Similarity=0.311 Sum_probs=49.9
Q ss_pred CCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHC-Cc-eEEec-CCcHHHHhhcceecCCCChHHHHHHHH
Q 007731 517 TSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELA-SL-GIALS-NGSEKAKAVANVIGASNDEDGVADAIY 587 (591)
Q Consensus 517 vsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~a-g~-gVAmg-NA~~elk~~Ad~Vt~s~~edGVa~~L~ 587 (591)
--|..-++-+|+.-+++.. ++++|||..|++||+.+ |. |+||+ |+..-....|+.-+-+.....++-.|+
T Consensus 190 g~ka~i~e~~~ele~~d~s-a~~VGDSItDv~ml~~~rgrGglAvaFNGNeYal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 190 GEKAKIMEGYCELEGIDFS-AVVVGDSITDVKMLEAARGRGGLAVAFNGNEYALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cchhHHHHHHHhhcCCCcc-eeEecCcccchHHHHHhhccCceEEEecCCcccccccceEEeccchhhhhHHHH
Confidence 3567778888887777655 89999999999999996 33 35554 777766667776555555555555554
No 200
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=95.16 E-value=0.12 Score=51.38 Aligned_cols=42 Identities=19% Similarity=0.256 Sum_probs=38.3
Q ss_pred CCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceE
Q 007731 516 GTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGI 557 (591)
Q Consensus 516 gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gV 557 (591)
...+......+++++|++++++++|||+..|+...+.+|+..
T Consensus 151 ~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 151 LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHT 192 (220)
T ss_pred cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEE
Confidence 456788999999999999999999999999999999999743
No 201
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=94.38 E-value=0.018 Score=57.82 Aligned_cols=58 Identities=28% Similarity=0.318 Sum_probs=42.4
Q ss_pred CceEEEEecCCCccCCCC--------------------------CCCHHHHHHHHHHHhcCCeEEEEcCCChhH---HHH
Q 007731 318 KFRYIFCDMDGTLLNSQS--------------------------KISLTTAKALKEALSRGLKVVVATGKTRPA---VIS 368 (591)
Q Consensus 318 ~iKlI~fDLDGTLld~~~--------------------------~is~~~~eaL~~L~~~Gi~vviaTGRs~~~---~~~ 368 (591)
+..+|+||+|+|++++.. ..-+..++.++.++++|+.|+++|||+-.. ...
T Consensus 71 ~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~ 150 (229)
T PF03767_consen 71 KPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATEK 150 (229)
T ss_dssp SEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHH
T ss_pred CCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHH
Confidence 457999999999996311 112457899999999999999999998653 233
Q ss_pred HHHhcCC
Q 007731 369 ALKKVDL 375 (591)
Q Consensus 369 ~l~~lgl 375 (591)
-+...|+
T Consensus 151 nL~~~G~ 157 (229)
T PF03767_consen 151 NLKKAGF 157 (229)
T ss_dssp HHHHHTT
T ss_pred HHHHcCC
Confidence 4455565
No 202
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=94.27 E-value=0.38 Score=55.39 Aligned_cols=41 Identities=24% Similarity=0.319 Sum_probs=35.8
Q ss_pred CCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCC
Q 007731 336 KISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLV 376 (591)
Q Consensus 336 ~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~ 376 (591)
.+-+..+..|+.+.+.+++++.+||-++-++-...+++++.
T Consensus 675 PlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv 715 (1160)
T KOG0209|consen 675 PLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIV 715 (1160)
T ss_pred CCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeee
Confidence 35578899999999999999999999999988888888763
No 203
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=94.15 E-value=0.27 Score=50.06 Aligned_cols=41 Identities=29% Similarity=0.507 Sum_probs=35.5
Q ss_pred ecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHH
Q 007731 512 IVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLEL 552 (591)
Q Consensus 512 I~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ 552 (591)
++..+.+||.++..++++.|..++.+++|-|+...+.-+..
T Consensus 156 lft~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~ 196 (252)
T PF11019_consen 156 LFTGGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEK 196 (252)
T ss_pred EEeCCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHH
Confidence 45567999999999999999999999999999877765554
No 204
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=94.14 E-value=0.041 Score=51.50 Aligned_cols=55 Identities=29% Similarity=0.373 Sum_probs=39.7
Q ss_pred eEEEEecCCCccCCCCC-------------------CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 320 RYIFCDMDGTLLNSQSK-------------------ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 320 KlI~fDLDGTLld~~~~-------------------is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
|++++||||||+.+... .-+...+.|+.+ .+.+.+++.|..+...+..+++.+..
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l-~~~~ev~i~T~~~~~ya~~v~~~ldp 74 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEEL-SKHYEVVIWTSASEEYAEPVLDALDP 74 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHH-HHHCEEEEE-SS-HHHHHHHHHHHTT
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHH-HHhceEEEEEeehhhhhhHHHHhhhh
Confidence 68999999999975432 346677777777 44599999999999899988887763
No 205
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=93.18 E-value=0.27 Score=57.56 Aligned_cols=41 Identities=22% Similarity=0.335 Sum_probs=35.5
Q ss_pred CCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 335 SKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 335 ~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
+.+-+++...|++|.+..++.+.|||-+..+.....++.|+
T Consensus 704 NkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgm 744 (1140)
T KOG0208|consen 704 NKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGM 744 (1140)
T ss_pred cccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccc
Confidence 45668889999999999999999999999888888887765
No 206
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=92.53 E-value=0.13 Score=57.57 Aligned_cols=71 Identities=21% Similarity=0.284 Sum_probs=49.6
Q ss_pred CceEEEEecCCCccCCCC----------CC-CHHHHHHHHHHHhcCCeEEEEcCCChhHH---HHHHHhcCCCCCCceee
Q 007731 318 KFRYIFCDMDGTLLNSQS----------KI-SLTTAKALKEALSRGLKVVVATGKTRPAV---ISALKKVDLVGRDGIIS 383 (591)
Q Consensus 318 ~iKlI~fDLDGTLld~~~----------~i-s~~~~eaL~~L~~~Gi~vviaTGRs~~~~---~~~l~~lgl~~~d~~I~ 383 (591)
.-|+|++|+|||++.++- .. .....+...+..++|++++.+|.|+...+ +.+++.+. ++|..-
T Consensus 529 n~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~---QdG~~L 605 (738)
T KOG2116|consen 529 NDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVE---QDGKKL 605 (738)
T ss_pred CCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHh---hcCccC
Confidence 357899999999998752 12 24566677777889999999999987544 45555543 355555
Q ss_pred cCCCEEEe
Q 007731 384 EFAPGVFI 391 (591)
Q Consensus 384 eng~~I~~ 391 (591)
-.||+|.-
T Consensus 606 PdGPViLS 613 (738)
T KOG2116|consen 606 PDGPVILS 613 (738)
T ss_pred CCCCEEeC
Confidence 56665544
No 207
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=91.75 E-value=0.46 Score=44.73 Aligned_cols=57 Identities=26% Similarity=0.201 Sum_probs=44.9
Q ss_pred CceEEEEecCCCccCCCCC-----------------------------------CCHHHHHHHHHHHhcCCeEEEEcCCC
Q 007731 318 KFRYIFCDMDGTLLNSQSK-----------------------------------ISLTTAKALKEALSRGLKVVVATGKT 362 (591)
Q Consensus 318 ~iKlI~fDLDGTLld~~~~-----------------------------------is~~~~eaL~~L~~~Gi~vviaTGRs 362 (591)
+.+.+++|||.||+++... +-+...+.|..+. +++.++++|..+
T Consensus 5 ~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~-~~yel~I~T~~~ 83 (156)
T TIGR02250 5 KKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEAS-KLYEMHVYTMGT 83 (156)
T ss_pred CceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHH-hhcEEEEEeCCc
Confidence 4478999999999985331 1246778888876 459999999999
Q ss_pred hhHHHHHHHhcCC
Q 007731 363 RPAVISALKKVDL 375 (591)
Q Consensus 363 ~~~~~~~l~~lgl 375 (591)
...+..+++.++.
T Consensus 84 ~~yA~~vl~~ldp 96 (156)
T TIGR02250 84 RAYAQAIAKLIDP 96 (156)
T ss_pred HHHHHHHHHHhCc
Confidence 9999999988875
No 208
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=91.58 E-value=0.42 Score=45.15 Aligned_cols=55 Identities=20% Similarity=0.194 Sum_probs=44.4
Q ss_pred eEEEEecCCCccCCCCC------------------------CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 320 RYIFCDMDGTLLNSQSK------------------------ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 320 KlI~fDLDGTLld~~~~------------------------is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
+.+++|||+||+.+... .-+...+.|..+.+. +.++|.|..+...+..+++.++.
T Consensus 2 ~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 2 KTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred cEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCc
Confidence 58999999999975432 125678888888776 89999999888888899988775
No 209
>COG4996 Predicted phosphatase [General function prediction only]
Probab=89.73 E-value=0.98 Score=40.90 Aligned_cols=55 Identities=27% Similarity=0.293 Sum_probs=45.7
Q ss_pred EEEEecCCCccCCCC------------------------CCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 321 YIFCDMDGTLLNSQS------------------------KISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 321 lI~fDLDGTLld~~~------------------------~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
+|+||.||||.|..+ .+.+..++.++.++..|+.+..+|=.-...+.+.++.+++
T Consensus 2 ~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~ 80 (164)
T COG4996 2 AIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDL 80 (164)
T ss_pred cEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhch
Confidence 799999999998532 1347789999999999999999998888888888888876
No 210
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=89.28 E-value=0.68 Score=45.23 Aligned_cols=58 Identities=14% Similarity=0.182 Sum_probs=44.0
Q ss_pred CCceEEEEecCCCccCCCC-------CCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 317 PKFRYIFCDMDGTLLNSQS-------KISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 317 ~~iKlI~fDLDGTLld~~~-------~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
...|++++||||||++... ..-|...+.|+.+.+ .+.++|=|..+...+...+..+++
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~-~feIvVwTAa~~~ya~~~l~~l~~ 83 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE-DYDIVIWSATSMKWIEIKMTELGV 83 (195)
T ss_pred CCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh-CCEEEEEecCCHHHHHHHHHHhcc
Confidence 3458999999999998632 134566677776655 688999898888888888888765
No 211
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=88.68 E-value=0.8 Score=51.60 Aligned_cols=56 Identities=27% Similarity=0.423 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecCCcHHHHhhcceecCCCC
Q 007731 519 KGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSNGSEKAKAVANVIGASND 578 (591)
Q Consensus 519 Kg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgNA~~elk~~Ad~Vt~s~~ 578 (591)
|-.-++.+.++ | ..|-.-||+.||.+.++.|++|+||.++.+.++..+|.|...+.
T Consensus 573 Ky~iV~~Lq~r-~---hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepg 628 (942)
T KOG0205|consen 573 KYEIVKILQER-K---HIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628 (942)
T ss_pred HHHHHHHHhhc-C---ceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCC
Confidence 44445555443 2 35788899999999999999999999999999999998875543
No 212
>PF11350 DUF3152: Protein of unknown function (DUF3152); InterPro: IPR022603 This entry represents Actinobacteria proteins of unknown function. Some are annotated as membrane proteins, however this cannot be confirmed.
Probab=87.78 E-value=5 Score=39.13 Aligned_cols=144 Identities=15% Similarity=0.144 Sum_probs=89.3
Q ss_pred hhhhhhhcccCCCccccccceeEEEEEecCCCCCh-----hHHHHHHHHhhhchhHHHHHHhhhcccccccccc-hhhhc
Q 007731 91 EQRGYRKARRRVAKSKQKELELNVSICIEDELPDD-----PEVLNIAEMLRLNAPTLMKLAFDSLKDSTYKTRD-TAVED 164 (591)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 164 (591)
|.-.||.+....+..-+..-.+...|.||++++.+ ..+.+.++. .|.. .-.|.... -.+..
T Consensus 10 G~Gt~~~v~~~~~~~G~g~~~~rY~VeVE~Gi~~~~~gg~~~fA~~V~~-----------tL~D--pRgW~~~g~~~F~r 76 (203)
T PF11350_consen 10 GSGTFRVVPGSGPAVGKGGRLYRYRVEVEDGIDVDAYGGDDAFAAMVDA-----------TLAD--PRGWTADGRVRFQR 76 (203)
T ss_pred CCccEEECCCCCCCCCCCCceEEEEEEEccCcCCcccccHHHHHHHHHH-----------HhcC--CCCCCcCCCEEEEE
Confidence 34456666665455544434678888899886543 456555553 2211 11122221 12233
Q ss_pred cCCCceeeEEEEEeChHHHHHHHHHHhCCCCCCcEeeccCCCCCCCCCccccccEEeeHHHHHHHHHHhCCCHHHHHHHH
Q 007731 165 VGGFESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPELKLPILMLGDIVISVETAARQAEERGHSLLDEIRIL 244 (591)
Q Consensus 165 ~~~~~~~e~~i~~~~~~~~~~lN~~~r~~d~~TdVlSF~~~~~~~~~~~~~lGdi~i~~~~~~~~a~~~~~~~~~~~~~l 244 (591)
+..- ..++.|.|.+...+.+|- -+-+-.-.+=-+ . ..-+.++|....=.+=+..++.++...=.++
T Consensus 77 V~~~-~~Df~I~Lasp~T~~~lC---~g~~~~~e~SC~--------~--~~g~~VvIN~~RWv~Ga~~f~gdl~~YRqYv 142 (203)
T PF11350_consen 77 VDSG-APDFRISLASPGTTDRLC---AGLDTSGETSCR--------N--PAGGRVVINLARWVRGAPAFGGDLASYRQYV 142 (203)
T ss_pred CCCC-CCCEEEEECCcchhhhhc---cCcCcCceeEee--------c--CCCCeEEEehHHhhccCcccCCcHHHHHHHh
Confidence 3222 268899999998888775 111111110000 0 0148899999999999999999999999999
Q ss_pred HHHhhhhhcCCCCCCCH
Q 007731 245 MVHGLLHLLGFDHEISE 261 (591)
Q Consensus 245 ~vHG~LHLlGyDh~~~~ 261 (591)
+=|.+=|.|||.|+.-.
T Consensus 143 INHEVGH~LGh~H~~Cp 159 (203)
T PF11350_consen 143 INHEVGHALGHGHEPCP 159 (203)
T ss_pred hhhhhhhhcccCCCcCC
Confidence 99999999999998643
No 213
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=87.61 E-value=10 Score=36.49 Aligned_cols=48 Identities=10% Similarity=0.224 Sum_probs=39.7
Q ss_pred CeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCc
Q 007731 508 DMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASL 555 (591)
Q Consensus 508 ~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~ 555 (591)
+++|.+.....-...-.+++...|+++.+++++-|..+.+...+.+|+
T Consensus 151 GyfDttiG~KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl 198 (229)
T COG4229 151 GYFDTTIGKKRESQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGL 198 (229)
T ss_pred ceeeccccccccchhHHHHHHhcCCCchheEEecCCHHHHHHHHhcch
Confidence 355665555555677788999999999999999999999999999885
No 214
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=87.50 E-value=0.49 Score=50.77 Aligned_cols=53 Identities=21% Similarity=0.236 Sum_probs=37.0
Q ss_pred CCCceEEEEecCCCccCCCCC----------C-CHHHHHHHHHHHhcCCeEEEEcCCChhHHHH
Q 007731 316 KPKFRYIFCDMDGTLLNSQSK----------I-SLTTAKALKEALSRGLKVVVATGKTRPAVIS 368 (591)
Q Consensus 316 ~~~iKlI~fDLDGTLld~~~~----------i-s~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~ 368 (591)
+...|+|++|+|||++.++.- . +..+....-+.-.+|+++..-|.|++..+..
T Consensus 372 r~n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rNGYkI~YltsR~~Gqa~s 435 (580)
T COG5083 372 RNNKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRNGYKIKYLTSRSYGQADS 435 (580)
T ss_pred eCCCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccCceEEEEEecccccchhh
Confidence 345689999999999986531 1 2233444455556899999999999865443
No 215
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=87.46 E-value=1.7 Score=41.41 Aligned_cols=120 Identities=18% Similarity=0.193 Sum_probs=64.9
Q ss_pred HHhCCCCEEEEeCCceeeecCCcccccccccccCCcccccccHHHhhcccCeeEEEEecChhh----HHHhHHHHHHHhc
Q 007731 421 SWEHKVPLIAFSGDRCLTLFDHPLVDSLHTTYHEPKAEIIPAIEDLLATVDIQKLIFLDTAEG----VATTIRPYWSEAT 496 (591)
Q Consensus 421 l~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~ki~~~~~~~~----~~~~l~~~l~~~~ 496 (591)
+++.++...++..|++.+........ .+....++++...-...+++++....+ ....-.+.+++.+
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~~~i~----------~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~l 105 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYEDEIP----------PEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKAL 105 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCcCcCC----------HHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhh
Confidence 67789999999999887543322111 011122333322222224555444310 0011122233333
Q ss_pred cCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCC-----CCCcEEEEecCh-hhHHHHHHCC-ceEEecCC
Q 007731 497 KDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGV-----STKEIMAIGDGE-NDVEMLELAS-LGIALSNG 562 (591)
Q Consensus 497 ~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI-----~~eeviafGDs~-NDi~Mlk~ag-~gVAmgNA 562 (591)
+ + .+.....-|..+.+.++++++. .++++++|||-. .|+-|....| ++|-+..+
T Consensus 106 g--I----------pvl~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 106 G--I----------PVLRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDG 166 (168)
T ss_pred C--C----------cEEEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence 2 2 2222234455555566666543 489999999975 8999999999 68877654
No 216
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=86.24 E-value=1.3 Score=48.32 Aligned_cols=56 Identities=18% Similarity=0.218 Sum_probs=45.5
Q ss_pred CceEEEEecCCCccCC----C------------CCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhc
Q 007731 318 KFRYIFCDMDGTLLNS----Q------------SKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKV 373 (591)
Q Consensus 318 ~iKlI~fDLDGTLld~----~------------~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~l 373 (591)
..|++++|||+||... + +..-.+..+.+..+.++|+.+++||-.....+.+.+..-
T Consensus 221 ~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~kh 292 (574)
T COG3882 221 SKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKH 292 (574)
T ss_pred ccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhC
Confidence 3589999999999852 1 123367888899999999999999999998998888754
No 217
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=85.74 E-value=0.81 Score=44.24 Aligned_cols=26 Identities=23% Similarity=0.363 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHhcCCeEEEEcCCChh
Q 007731 339 LTTAKALKEALSRGLKVVVATGKTRP 364 (591)
Q Consensus 339 ~~~~eaL~~L~~~Gi~vviaTGRs~~ 364 (591)
+...++|++|.+.|..++++|+|+..
T Consensus 76 ~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 76 PGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred HHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 34667777777777666666666543
No 218
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=80.95 E-value=7.3 Score=45.54 Aligned_cols=55 Identities=24% Similarity=0.421 Sum_probs=49.2
Q ss_pred EEEEecCCCccC---CCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 321 YIFCDMDGTLLN---SQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 321 lI~fDLDGTLld---~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
.+++-.||.++. -...+-++..+++++|++.|+++++.||-+...++.+.+++|+
T Consensus 519 ~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGI 576 (713)
T COG2217 519 VVFVAVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI 576 (713)
T ss_pred EEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCh
Confidence 789999997764 2346889999999999999999999999999999999999997
No 219
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=80.91 E-value=9.7 Score=37.65 Aligned_cols=83 Identities=14% Similarity=0.138 Sum_probs=55.4
Q ss_pred CCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEEcCCCcEEEeecCCHHHHH
Q 007731 336 KISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVHGRQGREIFRRNLDRDFCR 415 (591)
Q Consensus 336 ~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~d~~g~~i~~~~l~~e~v~ 415 (591)
.+.+...+.++.++++|.+++++||-....+..+.+.+|+ +..++.- ....+| ++ .|++.-..........
T Consensus 77 ~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~---d~~~an~--l~~~dG--~l--tG~v~g~~~~~~~K~~ 147 (212)
T COG0560 77 RLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGI---DYVVANE--LEIDDG--KL--TGRVVGPICDGEGKAK 147 (212)
T ss_pred cCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCC---chheeeE--EEEeCC--EE--eceeeeeecCcchHHH
Confidence 3566788889999999999999999988888999999998 3333311 111223 11 3444433344455666
Q ss_pred HHHHHHHhCCCC
Q 007731 416 EAYQYSWEHKVP 427 (591)
Q Consensus 416 eil~~l~~~~i~ 427 (591)
.+.+++.+.++.
T Consensus 148 ~l~~~~~~~g~~ 159 (212)
T COG0560 148 ALRELAAELGIP 159 (212)
T ss_pred HHHHHHHHcCCC
Confidence 666777777765
No 220
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=76.50 E-value=1.8 Score=46.03 Aligned_cols=43 Identities=28% Similarity=0.427 Sum_probs=34.5
Q ss_pred CceEEEEecCCCccCCCC------------CCCHHHHHHHHHHHhcCCeEEEEcC
Q 007731 318 KFRYIFCDMDGTLLNSQS------------KISLTTAKALKEALSRGLKVVVATG 360 (591)
Q Consensus 318 ~iKlI~fDLDGTLld~~~------------~is~~~~eaL~~L~~~Gi~vviaTG 360 (591)
.-|.+.|||||||+++.. .+.++.-.-|+.+.+.|+.++|.|-
T Consensus 74 ~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~iftn 128 (422)
T KOG2134|consen 74 GSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFTN 128 (422)
T ss_pred CcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhhccCCeEEEEEec
Confidence 458999999999998654 1345667778899999999999873
No 221
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=73.44 E-value=5.5 Score=36.48 Aligned_cols=56 Identities=21% Similarity=0.287 Sum_probs=38.3
Q ss_pred ceEEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEEEEcCCC--hhHHHHHHHhcC
Q 007731 319 FRYIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVVVATGKT--RPAVISALKKVD 374 (591)
Q Consensus 319 iKlI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vviaTGRs--~~~~~~~l~~lg 374 (591)
.-+-++||||.++.-...=.-..-+.++.+.+.|..+++||--+ +..++++...++
T Consensus 43 tgiAildL~G~~l~l~S~R~~~~~evi~~I~~~G~PviVAtDV~p~P~~V~Kia~~f~ 100 (138)
T PF04312_consen 43 TGIAILDLDGELLDLKSSRNMSRSEVIEWISEYGKPVIVATDVSPPPETVKKIARSFN 100 (138)
T ss_pred eEEEEEecCCcEEEEEeecCCCHHHHHHHHHHcCCEEEEEecCCCCcHHHHHHHHHhC
Confidence 35678999999997433222223455666777899999999654 356777776654
No 222
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=72.25 E-value=4.6 Score=38.63 Aligned_cols=47 Identities=23% Similarity=0.248 Sum_probs=32.4
Q ss_pred EEEEecCCCccCCCC---------------------------------CCCHHH-HHHHHHHHhcCCeEEEEcCCChhHH
Q 007731 321 YIFCDMDGTLLNSQS---------------------------------KISLTT-AKALKEALSRGLKVVVATGKTRPAV 366 (591)
Q Consensus 321 lI~fDLDGTLld~~~---------------------------------~is~~~-~eaL~~L~~~Gi~vviaTGRs~~~~ 366 (591)
.|-||+|.|++-+.. .|+.+. ++.|.--+.+|-.++++|||+...+
T Consensus 65 ~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~gk~ 144 (237)
T COG3700 65 AVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTPGKT 144 (237)
T ss_pred eEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcCCeEEEEecCCCCcc
Confidence 688899999995421 234443 4444445567999999999997644
Q ss_pred H
Q 007731 367 I 367 (591)
Q Consensus 367 ~ 367 (591)
.
T Consensus 145 d 145 (237)
T COG3700 145 D 145 (237)
T ss_pred c
Confidence 3
No 223
>smart00731 SprT SprT homologues. Predicted to have roles in transcription elongation. Contains a conserved HExxH motif, indicating a metalloprotease function.
Probab=70.80 E-value=12 Score=34.50 Aligned_cols=84 Identities=11% Similarity=0.094 Sum_probs=49.8
Q ss_pred HHHHHHHHHHhCCCCCCcEeeccCCCCCC-CCCccccccEEeeHHHHHHH-HHHhCCCHHHHHHHHHHHhhhhhcCCCCC
Q 007731 181 EFIRKLNKEWRDEDHATDVLSMSQHVPEL-KLPILMLGDIVISVETAARQ-AEERGHSLLDEIRILMVHGLLHLLGFDHE 258 (591)
Q Consensus 181 ~~~~~lN~~~r~~d~~TdVlSF~~~~~~~-~~~~~~lGdi~i~~~~~~~~-a~~~~~~~~~~~~~l~vHG~LHLlGyDh~ 258 (591)
+-.+++|.+|.+..=|+.-+.|....... ..-..-.+.|.|+...+... -+..-..+.+|++|+.+|-+ . -++.|.
T Consensus 5 ~~~~~~n~~~F~~~l~~~~i~w~~r~~~~~G~~~~~~~~I~ln~~l~~~~~~~~l~~~l~HEm~H~~~~~~-g-~~~~Hg 82 (146)
T smart00731 5 QRLEDASLRVFGRKLPHPKVVWNKRLRKTGGRCLLKSAEIRLNPKLLTENGRDRLRETLLHELCHAALYLF-G-RGYGHG 82 (146)
T ss_pred HHHHHHHHHHHCCCCCCCEEEEehhhhhhhHHhhcCCCEEEeCHHHHhhccHHHHHhhHHHHHHHHHHHHh-C-CCCCcC
Confidence 45678999999999888888886432110 00000158899998777632 12223367777777777743 2 355784
Q ss_pred CCHHHHHHHH
Q 007731 259 ISEEAEAEME 268 (591)
Q Consensus 259 ~~~~~~~~M~ 268 (591)
++=.+.|+
T Consensus 83 --~~f~~~~~ 90 (146)
T smart00731 83 --DEWKRWMR 90 (146)
T ss_pred --HHHHHHHH
Confidence 43334443
No 224
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=70.78 E-value=65 Score=30.12 Aligned_cols=38 Identities=11% Similarity=0.027 Sum_probs=29.2
Q ss_pred CHHHHHHHHHHHcCC-CCCcEEEEecChhhHHHHHHCCc
Q 007731 518 SKGSGVKMLLDHLGV-STKEIMAIGDGENDVEMLELASL 555 (591)
Q Consensus 518 sKg~AL~~L~e~lgI-~~eeviafGDs~NDi~Mlk~ag~ 555 (591)
=|...++.+.+.+.- ...-+++|||..+|+.+.+.+|+
T Consensus 102 ~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 102 FKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 488889998887642 22345679999999999999986
No 225
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=68.10 E-value=11 Score=37.94 Aligned_cols=59 Identities=22% Similarity=0.256 Sum_probs=43.2
Q ss_pred CCceEEEEecCCCccCCCC----------C----------------CCHHHHHHHHHHHhcCCeEEEEcCCChhH----H
Q 007731 317 PKFRYIFCDMDGTLLNSQS----------K----------------ISLTTAKALKEALSRGLKVVVATGKTRPA----V 366 (591)
Q Consensus 317 ~~iKlI~fDLDGTLld~~~----------~----------------is~~~~eaL~~L~~~Gi~vviaTGRs~~~----~ 366 (591)
.|-++|+.|||-|++|... . .-+...+.++..-++|..|..+|-|.... .
T Consensus 77 ~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T 156 (274)
T COG2503 77 GKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGT 156 (274)
T ss_pred CCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhcccchh
Confidence 3456999999999998532 1 22456778888888999999999998765 3
Q ss_pred HHHHHhcCC
Q 007731 367 ISALKKVDL 375 (591)
Q Consensus 367 ~~~l~~lgl 375 (591)
.+-+...|+
T Consensus 157 ~~nLk~~g~ 165 (274)
T COG2503 157 IENLKSEGL 165 (274)
T ss_pred HHHHHHcCc
Confidence 344555666
No 226
>PRK11590 hypothetical protein; Provisional
Probab=64.61 E-value=33 Score=33.49 Aligned_cols=75 Identities=17% Similarity=0.076 Sum_probs=49.8
Q ss_pred CHHHHHHHH-HHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEEcCCCcEEEeecCCHHHHHH
Q 007731 338 SLTTAKALK-EALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVHGRQGREIFRRNLDRDFCRE 416 (591)
Q Consensus 338 s~~~~eaL~-~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~d~~g~~i~~~~l~~e~v~e 416 (591)
.+...+.|+ .++++|+.++++|+.+...+..++..+++...+.+|+.. ..+. ..|+..-..+...+.+..
T Consensus 97 ~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~-l~~~--------~tg~~~g~~c~g~~K~~~ 167 (211)
T PRK11590 97 FPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQ-MQRR--------YGGWVLTLRCLGHEKVAQ 167 (211)
T ss_pred CccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceEEEE-EEEE--------EccEECCccCCChHHHHH
Confidence 456788884 566789999999999998899999888742223444322 1111 134444445667777777
Q ss_pred HHHHH
Q 007731 417 AYQYS 421 (591)
Q Consensus 417 il~~l 421 (591)
+-+++
T Consensus 168 l~~~~ 172 (211)
T PRK11590 168 LERKI 172 (211)
T ss_pred HHHHh
Confidence 77766
No 227
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=64.38 E-value=39 Score=31.66 Aligned_cols=41 Identities=10% Similarity=0.052 Sum_probs=34.9
Q ss_pred CCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCC
Q 007731 336 KISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLV 376 (591)
Q Consensus 336 ~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~ 376 (591)
.+.+...+.|+.|+++|++++++|+.....+..+++.+++.
T Consensus 72 ~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 112 (188)
T TIGR01489 72 PIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEK 112 (188)
T ss_pred CCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCCh
Confidence 34556788999999999999999999988888888888873
No 228
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=63.84 E-value=7.9 Score=40.40 Aligned_cols=55 Identities=18% Similarity=0.175 Sum_probs=37.9
Q ss_pred eEEEEecCCCccCCCCCCCHHHHHHHHHHHhc----CCeEEEEc--CCChh--HHHHHHHhcCC
Q 007731 320 RYIFCDMDGTLLNSQSKISLTTAKALKEALSR----GLKVVVAT--GKTRP--AVISALKKVDL 375 (591)
Q Consensus 320 KlI~fDLDGTLld~~~~is~~~~eaL~~L~~~----Gi~vviaT--GRs~~--~~~~~l~~lgl 375 (591)
=.++||+||.|+-.... -+...+||+.|..+ .+.+++.| |-..+ .++.+-..+|+
T Consensus 36 fgfafDIDGVL~RG~~~-i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv 98 (389)
T KOG1618|consen 36 FGFAFDIDGVLFRGHRP-IPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGV 98 (389)
T ss_pred eeEEEecccEEEecCCC-CcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCC
Confidence 37999999999986554 45668899999887 57888877 22222 23445555554
No 229
>COG5639 Uncharacterized conserved small protein [Function unknown]
Probab=63.80 E-value=2.9 Score=33.61 Aligned_cols=23 Identities=35% Similarity=0.553 Sum_probs=18.6
Q ss_pred ccchhhhhhhhhhhcccCCCccc
Q 007731 84 SSRKVFAEQRGYRKARRRVAKSK 106 (591)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~ 106 (591)
-..+|+||-|||+|+|.-..||+
T Consensus 53 MLe~Fla~DR~F~kark~~~p~~ 75 (77)
T COG5639 53 MLEAFLAGDRGFAKARKKAAPPK 75 (77)
T ss_pred HHHHHHhccHHHHHHHHhcCCCC
Confidence 34899999999999999755554
No 230
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=63.35 E-value=45 Score=33.89 Aligned_cols=31 Identities=13% Similarity=0.236 Sum_probs=22.9
Q ss_pred HHHHHHHcC--CCCCcEEEEecChhhHHHHHHC
Q 007731 523 VKMLLDHLG--VSTKEIMAIGDGENDVEMLELA 553 (591)
Q Consensus 523 L~~L~e~lg--I~~eeviafGDs~NDi~Mlk~a 553 (591)
++..++.+. -...+++..|||.-|+.|...+
T Consensus 215 ~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv 247 (298)
T KOG3128|consen 215 LQNESEYFHQLAGRVNVILLGDSIGDLHMADGV 247 (298)
T ss_pred HHhhhHHHhhccCCceEEEeccccccchhhcCC
Confidence 344355543 2456899999999999999885
No 231
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=63.13 E-value=48 Score=32.55 Aligned_cols=76 Identities=17% Similarity=0.114 Sum_probs=48.9
Q ss_pred CCHHHHHHHH-HHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecCCCEEEecCEEEEcCCCcEEEeecCCHHHHH
Q 007731 337 ISLTTAKALK-EALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEFAPGVFIQGLLVHGRQGREIFRRNLDRDFCR 415 (591)
Q Consensus 337 is~~~~eaL~-~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~eng~~I~~NGA~I~d~~g~~i~~~~l~~e~v~ 415 (591)
+.+...+.|+ .++++|+.++|+|+.+...++.+.+..++...+.+|+.. ..+.+ +|...-..+...+.+.
T Consensus 95 l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~--------le~~~-gg~~~g~~c~g~~Kv~ 165 (210)
T TIGR01545 95 AFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQ--------IERGN-GGWVLPLRCLGHEKVA 165 (210)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEE--------eEEeC-CceEcCccCCChHHHH
Confidence 4567789996 667789999999999988888888775542223444321 11211 2333334466777777
Q ss_pred HHHHHH
Q 007731 416 EAYQYS 421 (591)
Q Consensus 416 eil~~l 421 (591)
.+-+++
T Consensus 166 rl~~~~ 171 (210)
T TIGR01545 166 QLEQKI 171 (210)
T ss_pred HHHHHh
Confidence 777766
No 232
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=61.78 E-value=55 Score=38.93 Aligned_cols=58 Identities=26% Similarity=0.390 Sum_probs=51.0
Q ss_pred CceEEEEecCCCccC---CCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 318 KFRYIFCDMDGTLLN---SQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 318 ~iKlI~fDLDGTLld---~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
....+.+=+||+|+. -...+-++...++..|++.|+++++.||-....+..+.+++|+
T Consensus 702 g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi 762 (951)
T KOG0207|consen 702 GQTVVYVAVNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGI 762 (951)
T ss_pred CceEEEEEECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCc
Confidence 456899999999984 3456788999999999999999999999999999999999885
No 233
>cd04327 ZnMc_MMP_like_3 Zinc-dependent metalloprotease; MMP_like sub-family 3. A group of bacterial and fungal metalloproteinase domains similar to matrix metalloproteinases and astacin.
Probab=60.41 E-value=5.6 Score=38.80 Aligned_cols=21 Identities=38% Similarity=0.575 Sum_probs=17.6
Q ss_pred HHHHHHHHhhhhhcCCCCCCC
Q 007731 240 EIRILMVHGLLHLLGFDHEIS 260 (591)
Q Consensus 240 ~~~~l~vHG~LHLlGyDh~~~ 260 (591)
.....++|.|.|.||+-||.+
T Consensus 91 ~~~~~i~HElgHaLG~~HEh~ 111 (198)
T cd04327 91 EFSRVVLHEFGHALGFIHEHQ 111 (198)
T ss_pred hHHHHHHHHHHHHhcCccccc
Confidence 345689999999999999853
No 234
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=59.24 E-value=25 Score=36.17 Aligned_cols=72 Identities=13% Similarity=0.073 Sum_probs=41.3
Q ss_pred ccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEecCCeeeecCCCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHH
Q 007731 469 TVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAIPDMLEIVPPGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVE 548 (591)
Q Consensus 469 ~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~~~~iEI~p~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~ 548 (591)
...+..++++.............+.. ++-. . .....+-......+|....+.+.+.++| +++|||..+|+.
T Consensus 132 ~~G~~v~iVTnR~~~~~~~T~~~Lkk-~Gi~--~--~~~d~lllr~~~~~K~~rr~~I~~~y~I----vl~vGD~~~Df~ 202 (266)
T TIGR01533 132 SKGVKIFYVSNRSEKEKAATLKNLKR-FGFP--Q--ADEEHLLLKKDKSSKESRRQKVQKDYEI----VLLFGDNLLDFD 202 (266)
T ss_pred HCCCeEEEEeCCCcchHHHHHHHHHH-cCcC--C--CCcceEEeCCCCCCcHHHHHHHHhcCCE----EEEECCCHHHhh
Confidence 45566666666554443333344432 1110 0 0011222223346799899988887776 899999999985
Q ss_pred H
Q 007731 549 M 549 (591)
Q Consensus 549 M 549 (591)
-
T Consensus 203 ~ 203 (266)
T TIGR01533 203 D 203 (266)
T ss_pred h
Confidence 4
No 235
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=59.22 E-value=9.4 Score=36.63 Aligned_cols=39 Identities=23% Similarity=0.383 Sum_probs=35.9
Q ss_pred CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 337 ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 337 is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
+.+...++|+.|++.|++++++||.+...+..+.+.+|+
T Consensus 128 ~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi 166 (215)
T PF00702_consen 128 LRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGI 166 (215)
T ss_dssp BHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTS
T ss_pred chhhhhhhhhhhhccCcceeeeecccccccccccccccc
Confidence 456689999999999999999999999999999999998
No 236
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=58.42 E-value=17 Score=35.82 Aligned_cols=39 Identities=23% Similarity=0.175 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCC
Q 007731 338 SLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLV 376 (591)
Q Consensus 338 s~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~ 376 (591)
-+...++|..|+++|++++|+|+++...+...++.+|+.
T Consensus 91 ~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~ 129 (220)
T COG0546 91 FPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLA 129 (220)
T ss_pred CCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCc
Confidence 445688999999999999999999999999999998883
No 237
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=57.59 E-value=14 Score=35.60 Aligned_cols=40 Identities=28% Similarity=0.377 Sum_probs=35.4
Q ss_pred CCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 336 KISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 336 ~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
.+.+...+.|+.|+++|++++++||.+...+...++.+|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l 114 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGL 114 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCC
Confidence 4556779999999999999999999998888888888887
No 238
>PRK10671 copA copper exporting ATPase; Provisional
Probab=57.08 E-value=72 Score=38.26 Aligned_cols=57 Identities=16% Similarity=0.251 Sum_probs=47.6
Q ss_pred ceEEEEecCCCccC---CCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 319 FRYIFCDMDGTLLN---SQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 319 iKlI~fDLDGTLld---~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
...+++-.||+++. -...+.+...++|++|++.|++++++||.+...+..+.+.+|+
T Consensus 630 ~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi 689 (834)
T PRK10671 630 ATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGI 689 (834)
T ss_pred CeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 45677777888663 2445778889999999999999999999999999999999887
No 239
>PF06262 DUF1025: Possibl zinc metallo-peptidase; InterPro: IPR010428 This is a family of bacterial protein with undetermined function.; PDB: 3E11_A.
Probab=55.95 E-value=7.6 Score=33.53 Aligned_cols=40 Identities=30% Similarity=0.441 Sum_probs=32.0
Q ss_pred ccEEeeHHHHHHHHHHhCCCHHHHHHHHHHHhhhhhcCCCC
Q 007731 217 GDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDH 257 (591)
Q Consensus 217 Gdi~i~~~~~~~~a~~~~~~~~~~~~~l~vHG~LHLlGyDh 257 (591)
--|+|=-.-+.+.|...+. +.+.+.+.+||.+-|++|.|.
T Consensus 50 ~rI~lyR~pl~~~~~~~~e-L~~~I~~tlvhEiah~fG~~~ 89 (97)
T PF06262_consen 50 DRIVLYRRPLERRARSREE-LAELIRDTLVHEIAHHFGISD 89 (97)
T ss_dssp EEEEEEHHHHHHT-SSHHH-HHHHHHHHHHHHHHHHTT--H
T ss_pred CEEEEehHHHHHHhCCHHH-HHHHHHHHHHHHHHHHcCCCH
Confidence 4578888888888877776 999999999999999999875
No 240
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=55.34 E-value=17 Score=35.06 Aligned_cols=39 Identities=21% Similarity=0.279 Sum_probs=34.4
Q ss_pred CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 337 ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 337 is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
+.+...+.|+.|+++|++++++|+.+...+...++.+++
T Consensus 86 ~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l 124 (213)
T TIGR01449 86 VFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGL 124 (213)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCc
Confidence 455678999999999999999999998889999998887
No 241
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=55.11 E-value=18 Score=36.27 Aligned_cols=39 Identities=21% Similarity=0.181 Sum_probs=33.7
Q ss_pred CHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCC
Q 007731 338 SLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLV 376 (591)
Q Consensus 338 s~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~ 376 (591)
.+...+.|+.|+++|++++|+||.+...+..+++.+++.
T Consensus 101 ~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~ 139 (253)
T TIGR01422 101 IPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQ 139 (253)
T ss_pred CCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhc
Confidence 456688899999999999999999998888888887763
No 242
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=54.49 E-value=19 Score=34.50 Aligned_cols=34 Identities=24% Similarity=0.229 Sum_probs=31.1
Q ss_pred HHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 342 AKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 342 ~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
.+.|+.|+++|++++++||++...+...++.+|+
T Consensus 112 ~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl 145 (197)
T TIGR01548 112 KGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGL 145 (197)
T ss_pred HHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCc
Confidence 7888888889999999999999999999999887
No 243
>cd04283 ZnMc_hatching_enzyme Zinc-dependent metalloprotease, hatching enzyme-like subfamily. Hatching enzymes are secreted by teleost embryos to digest the egg envelope or chorion. In some teleosts, the hatching enzyme may be a system consisting of two evolutionary related metalloproteases, high choriolytic enzyme and low choriolytic enzyme (HCE and LCE), which may have different substrate specificities and cooperatively digest the chorion.
Probab=54.41 E-value=6.7 Score=37.92 Aligned_cols=18 Identities=50% Similarity=0.765 Sum_probs=15.8
Q ss_pred HHHHHhhhhhcCCCCCCC
Q 007731 243 ILMVHGLLHLLGFDHEIS 260 (591)
Q Consensus 243 ~l~vHG~LHLlGyDh~~~ 260 (591)
-.++|.++|.||+-||..
T Consensus 79 G~i~HEl~HaLG~~HEhs 96 (182)
T cd04283 79 GIIQHELLHALGFYHEQT 96 (182)
T ss_pred chHHHHHHHHhCCccccc
Confidence 479999999999999863
No 244
>PF07759 DUF1615: Protein of unknown function (DUF1615); InterPro: IPR011673 This is a family of proteins of unknown function expressed by various bacterial species. Some members of this family (e.g. Q8Z8Z7 from SWISSPROT, Q8ZRF4 from SWISSPROT) are thought to be lipoproteins. Another member of this family (Q93SV8 from SWISSPROT) is thought to be involved in photosynthesis [].
Probab=54.20 E-value=62 Score=33.62 Aligned_cols=121 Identities=21% Similarity=0.241 Sum_probs=74.8
Q ss_pred CCccccccEEeeHHHHHHHHHHhCCCHHHHHHHH-------HHHhhhhhcCCCCCCCHHHHHHHHHHHHHHHHhcCCccc
Q 007731 211 LPILMLGDIVISVETAARQAEERGHSLLDEIRIL-------MVHGLLHLLGFDHEISEEAEAEMEKNEEFLLQSLGWKGK 283 (591)
Q Consensus 211 ~~~~~lGdi~i~~~~~~~~a~~~~~~~~~~~~~l-------~vHG~LHLlGyDh~~~~~~~~~M~~~e~~il~~l~~~~~ 283 (591)
.|..-+|-+=+|...|+..++.+.-.....+.+- +-.|+-|||||-+.-++ - |=.+
T Consensus 122 NPV~TgGpMQVSI~fAe~h~r~yp~~~~gsiR~evftrrGGvyfG~a~LL~Ypa~Y~~-~-----------lYRF----- 184 (319)
T PF07759_consen 122 NPVHTGGPMQVSIAFAEAHARGYPYPVDGSIRDEVFTRRGGVYFGIAHLLGYPANYDD-P-----------LYRF----- 184 (319)
T ss_pred CCcccCCCceeeHHHHHHhccCCCCCCCccHHHHHHhcccchHHhHHHHcCCCCCCCc-c-----------ceee-----
Confidence 4556789999999999999996554443344333 45899999999986522 1 1111
Q ss_pred CccccccccccchHH---HHhhchhhhccccccccCCCceEEEEecCCCccCCCC--CCCHHHHHHHHHHHhcCCeEEEE
Q 007731 284 GLIQSAYDSETNTNI---QVENSDDRKQEGSLRFYKPKFRYIFCDMDGTLLNSQS--KISLTTAKALKEALSRGLKVVVA 358 (591)
Q Consensus 284 gl~~~a~d~~~~~~~---~l~~~~~~~~~~~l~~~~~~iKlI~fDLDGTLld~~~--~is~~~~eaL~~L~~~Gi~vvia 358 (591)
+-||.-.++.+ |-.+++.+. -+-+++||-|+..++ .-+..+..++..+.. ++
T Consensus 185 ----ADfNAG~YaSRNAAFQ~avsrlt-------------g~~LalDGDLl~Y~~~~~~~s~Te~A~~~l~~-~l----- 241 (319)
T PF07759_consen 185 ----ADFNAGWYASRNAAFQSAVSRLT-------------GIKLALDGDLLRYGSPRDEPSSTELAVRSLAK-RL----- 241 (319)
T ss_pred ----cccccchhhhhhHHHHHHHHHhc-------------CCeecCCCCeecCCCCCCCCCHHHHHHHHHHh-cc-----
Confidence 33666555543 333333221 245789999998766 456677888887732 22
Q ss_pred cCCChhHHHHHHHh
Q 007731 359 TGKTRPAVISALKK 372 (591)
Q Consensus 359 TGRs~~~~~~~l~~ 372 (591)
|-+...+..-+++
T Consensus 242 -~~s~~~Ir~dl~k 254 (319)
T PF07759_consen 242 -GMSERQIRRDLEK 254 (319)
T ss_pred -CCCHHHHHHHHHc
Confidence 3355556555543
No 245
>cd04268 ZnMc_MMP_like Zinc-dependent metalloprotease, MMP_like subfamily. This group contains matrix metalloproteinases (MMPs), serralysins, and the astacin_like family of proteases.
Probab=53.96 E-value=9.5 Score=35.51 Aligned_cols=22 Identities=32% Similarity=0.400 Sum_probs=19.5
Q ss_pred HHHHHHHHHHhhhhhcCCCCCC
Q 007731 238 LDEIRILMVHGLLHLLGFDHEI 259 (591)
Q Consensus 238 ~~~~~~l~vHG~LHLlGyDh~~ 259 (591)
...+...++|.|.|.||..|+.
T Consensus 91 ~~~~~~~~~HEiGHaLGL~H~~ 112 (165)
T cd04268 91 GARLRNTAEHELGHALGLRHNF 112 (165)
T ss_pred HHHHHHHHHHHHHHHhcccccC
Confidence 3478899999999999999976
No 246
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=53.52 E-value=40 Score=30.63 Aligned_cols=56 Identities=11% Similarity=0.100 Sum_probs=40.8
Q ss_pred eEEEEecCCCccCCCC---------CCCHHHHHHHHHHHhcCCeEEEEcCCC-hhHHHHHHHhcCC
Q 007731 320 RYIFCDMDGTLLNSQS---------KISLTTAKALKEALSRGLKVVVATGKT-RPAVISALKKVDL 375 (591)
Q Consensus 320 KlI~fDLDGTLld~~~---------~is~~~~eaL~~L~~~Gi~vviaTGRs-~~~~~~~l~~lgl 375 (591)
+++.+|+|+|+-+... .+.+.....|.+|.++|+..++|+--. ...+...++.+.+
T Consensus 19 ~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkv 84 (144)
T KOG4549|consen 19 RLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKV 84 (144)
T ss_pred EEEEecccccccccccCcccCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhcc
Confidence 6788899999886432 245777888999999999999998433 3445566766654
No 247
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=53.13 E-value=20 Score=34.80 Aligned_cols=40 Identities=30% Similarity=0.221 Sum_probs=35.2
Q ss_pred CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCC
Q 007731 337 ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLV 376 (591)
Q Consensus 337 is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~ 376 (591)
+.+...+.|+.|+++|++++++||.....+...++.+|+.
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 4566789999999999999999999988899999988873
No 248
>PLN02954 phosphoserine phosphatase
Probab=52.39 E-value=23 Score=34.58 Aligned_cols=40 Identities=18% Similarity=0.256 Sum_probs=35.4
Q ss_pred CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCC
Q 007731 337 ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLV 376 (591)
Q Consensus 337 is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~ 376 (591)
+.+...+.|+.++++|++++|+||.....+..+++.+|+.
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 4567788999999999999999999999999999998873
No 249
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=52.06 E-value=29 Score=40.99 Aligned_cols=57 Identities=18% Similarity=0.229 Sum_probs=48.4
Q ss_pred ceEEEEecCCCccC---CCCCCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 319 FRYIFCDMDGTLLN---SQSKISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 319 iKlI~fDLDGTLld---~~~~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
.+.+++=.||+++. -...+-++..++|++|++.|++++++||.+...+..+.+++|+
T Consensus 548 ~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi 607 (741)
T PRK11033 548 KTVVLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI 607 (741)
T ss_pred CEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 35666667887764 2346789999999999999999999999999999999999987
No 250
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=51.59 E-value=18 Score=35.31 Aligned_cols=40 Identities=25% Similarity=0.287 Sum_probs=35.3
Q ss_pred CCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 336 KISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 336 ~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
.+.+...+.|+.|+++|+.++++||.....+...++.+++
T Consensus 87 ~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l 126 (220)
T TIGR03351 87 VALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGW 126 (220)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhh
Confidence 3556679999999999999999999999999999988887
No 251
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=49.89 E-value=16 Score=33.42 Aligned_cols=40 Identities=15% Similarity=0.267 Sum_probs=35.1
Q ss_pred CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCC
Q 007731 337 ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLV 376 (591)
Q Consensus 337 is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~ 376 (591)
+.+...+.|++|+++|++++++|+.+...+...++.+|+.
T Consensus 78 ~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 78 PYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp ESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred hhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 4556789999999899999999999998899999998874
No 252
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=49.49 E-value=27 Score=32.44 Aligned_cols=39 Identities=15% Similarity=0.202 Sum_probs=34.4
Q ss_pred CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 337 ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 337 is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
+.+...+.++.++++|+.++++||.....+..+++.+|+
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~ 112 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGI 112 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCC
Confidence 346678899999999999999999999889999998887
No 253
>cd04281 ZnMc_BMP1_TLD Zinc-dependent metalloprotease; BMP1/TLD-like subfamily. BMP1 (Bone morphogenetic protein 1) and TLD (tolloid)-like metalloproteases play vital roles in extracellular matrix formation, by cleaving precursor proteins such as enzymes, structural proteins, and proteins involved in the mineralization of the extracellular matrix. The drosophila protein tolloid and its Xenopus homologue xolloid cleave and inactivate Sog and chordin, respectively, which are inhibitors of Dpp (the Drosophila decapentaplegic gene product) and its homologue BMP4, involved in dorso-ventral patterning.
Probab=48.72 E-value=8.8 Score=37.69 Aligned_cols=18 Identities=44% Similarity=0.757 Sum_probs=15.7
Q ss_pred HHHHhhhhhcCCCCCCCH
Q 007731 244 LMVHGLLHLLGFDHEISE 261 (591)
Q Consensus 244 l~vHG~LHLlGyDh~~~~ 261 (591)
.++|.|+|.|||-||..-
T Consensus 90 ti~HEl~HaLGf~HEhsR 107 (200)
T cd04281 90 IVVHELGHVIGFWHEHTR 107 (200)
T ss_pred hHHHHHHHHhcCcchhcc
Confidence 799999999999998643
No 254
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=47.87 E-value=18 Score=28.64 Aligned_cols=27 Identities=33% Similarity=0.668 Sum_probs=24.0
Q ss_pred HHHHHHHHcCCCCCcEEEEecChhhHHHHHH
Q 007731 522 GVKMLLDHLGVSTKEIMAIGDGENDVEMLEL 552 (591)
Q Consensus 522 AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ 552 (591)
-++.+++.+|+ +++|||-.-|++|++.
T Consensus 6 DVqQlLK~~G~----ivyfg~r~~~iemm~~ 32 (68)
T COG4483 6 DVQQLLKKFGI----IVYFGKRLYDIEMMQI 32 (68)
T ss_pred HHHHHHHHCCe----eeecCCHHHHHHHHHH
Confidence 46788999997 8999999999999985
No 255
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=47.86 E-value=25 Score=34.15 Aligned_cols=39 Identities=13% Similarity=0.142 Sum_probs=34.1
Q ss_pred CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 337 ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 337 is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
+.+...+.|+.|+++|++++++|+.+...+...++.+|+
T Consensus 95 ~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l 133 (221)
T TIGR02253 95 VYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGV 133 (221)
T ss_pred CCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCCh
Confidence 456779999999999999999999988888888888887
No 256
>PRK11587 putative phosphatase; Provisional
Probab=47.65 E-value=31 Score=33.75 Aligned_cols=39 Identities=15% Similarity=0.115 Sum_probs=31.9
Q ss_pred CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 337 ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 337 is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
+.+...+.|+.|+++|++++++|+.+.......++..++
T Consensus 84 ~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 84 ALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 456678999999999999999999887766666666666
No 257
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=47.64 E-value=33 Score=33.57 Aligned_cols=40 Identities=23% Similarity=0.246 Sum_probs=35.6
Q ss_pred CCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 336 KISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 336 ~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
.+.+.+.+.|+.|+++|++++++|+.....+...++.+++
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l 131 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDL 131 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcc
Confidence 4567789999999999999999999998888888888887
No 258
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=47.48 E-value=32 Score=34.59 Aligned_cols=40 Identities=23% Similarity=0.061 Sum_probs=34.9
Q ss_pred CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCC
Q 007731 337 ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLV 376 (591)
Q Consensus 337 is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~ 376 (591)
+.+...+.|+.|+++|++++|+|+.+...+...++.+++.
T Consensus 109 l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 148 (248)
T PLN02770 109 PLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLS 148 (248)
T ss_pred cCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 3456788999999999999999999999999999998873
No 259
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=46.89 E-value=1e+02 Score=30.03 Aligned_cols=39 Identities=10% Similarity=0.009 Sum_probs=33.4
Q ss_pred CCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 336 KISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 336 ~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
.+.+...+.|+.+++.| +++++||-....+..+++.+|+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi 106 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGF 106 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCC
Confidence 35677888899888875 9999999998889999999998
No 260
>PF01400 Astacin: Astacin (Peptidase family M12A) This Prosite motif covers only the active site.; InterPro: IPR001506 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M12, subfamily M12A (astacin family, clan MA(M)). The protein fold of the peptidase domain for members of this family resembles that of thermolysin, the type example for clan MA and the predicted active site residues for members of this family and thermolysin occur in the motif HEXXH []. The astacin () family of metalloendopeptidases encompasses a range of proteins found in hydra to humans, in mature and developmental systems []. Their functions include activation of growth factors, degradation of polypeptides, and processing of extracellular proteins []. The proteins are synthesised with N-terminal signal and pro-enzyme sequences, and many contain multiple domains C-terminal to the protease domain. They are either secreted from cells, or are associated with the plasma membrane. The astacin molecule adopts a kidney shape, with a deep active-site cleft between its N- and C-terminal domains []. The zinc ion, which lies at the bottom of the cleft, exhibits a unique penta-coordinated mode of binding, involving 3 histidine residues, a tyrosine and a water molecule (which is also bound to the carboxylate side chain of Glu93) []. The N-terminal domain comprises 2 alpha-helices and a 5-stranded beta-sheet. The overall topology of this domain is shared by the archetypal zinc-endopeptidase thermolysin. Astacin protease domains also share common features with serralysins, matrix metalloendopeptidases, and snake venom proteases; they cleave peptide bonds in polypeptides such as insulin B chain and bradykinin, and in proteins such as casein and gelatin; and they have arylamidase activity [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3LQB_A 3EDH_A 3EDG_A 3EDI_A 1IAE_A 1IAB_A 1IAA_A 1AST_A 1IAC_A 1QJJ_A ....
Probab=46.13 E-value=8.8 Score=37.27 Aligned_cols=17 Identities=47% Similarity=0.548 Sum_probs=13.4
Q ss_pred HHHHHhhhhhcCCCCCC
Q 007731 243 ILMVHGLLHLLGFDHEI 259 (591)
Q Consensus 243 ~l~vHG~LHLlGyDh~~ 259 (591)
..++|.++|.||+-||.
T Consensus 81 ~~i~HEl~HaLG~~HEh 97 (191)
T PF01400_consen 81 GTILHELGHALGFWHEH 97 (191)
T ss_dssp HHHHHHHHHHHTB--GG
T ss_pred cchHHHHHHHHhhhhhh
Confidence 47899999999999976
No 261
>cd04282 ZnMc_meprin Zinc-dependent metalloprotease, meprin_like subfamily. Meprins are membrane-bound or secreted extracellular proteases, which cleave a variety of targets, including peptides such as parathyroid hormone, gastrin, and cholecystokinin, cytokines such as osteopontin, and proteins such as collagen IV, fibronectin, casein and gelatin. Meprins may also be able to release proteins from the cell surface. Closely related meprin alpha- and beta-subunits form homo- and hetero-oligomers; these complexes are found on epithelial cells of the intestine, for example, and are also expressed in certain cancer cells.
Probab=46.11 E-value=10 Score=38.00 Aligned_cols=18 Identities=50% Similarity=0.709 Sum_probs=15.6
Q ss_pred HHHHHhhhhhcCCCCCCC
Q 007731 243 ILMVHGLLHLLGFDHEIS 260 (591)
Q Consensus 243 ~l~vHG~LHLlGyDh~~~ 260 (591)
-.++|.++|.|||-||.+
T Consensus 122 Gti~HEl~HalGf~HEqs 139 (230)
T cd04282 122 ATVEHEFLHALGFYHEQS 139 (230)
T ss_pred chHHHHHHHHhCCccccc
Confidence 468999999999999864
No 262
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=45.83 E-value=32 Score=32.85 Aligned_cols=38 Identities=16% Similarity=0.272 Sum_probs=33.3
Q ss_pred CHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 338 SLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 338 s~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
.+...++|+.|+++|++++++|+.+...+...++.+|+
T Consensus 94 ~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl 131 (198)
T TIGR01428 94 HPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGL 131 (198)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCC
Confidence 45668899999999999999999998888888888886
No 263
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=45.22 E-value=41 Score=32.95 Aligned_cols=39 Identities=13% Similarity=0.095 Sum_probs=34.0
Q ss_pred CCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 336 KISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 336 ~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
.+.+...+.|+.++++|++++|+||.....+..+++.+ +
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~ 112 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-I 112 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-C
Confidence 45677889999999999999999999988888988887 5
No 264
>COG3824 Predicted Zn-dependent protease [General function prediction only]
Probab=45.09 E-value=27 Score=31.25 Aligned_cols=41 Identities=17% Similarity=0.301 Sum_probs=35.4
Q ss_pred cEEeeHHHHHHHHHHhCCCHHHHHHHHHHHhhhhhcCCCCC
Q 007731 218 DIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHE 258 (591)
Q Consensus 218 di~i~~~~~~~~a~~~~~~~~~~~~~l~vHG~LHLlGyDh~ 258 (591)
-|.|--..+...+.+...++-+-++|.+||.+-|=.|-+++
T Consensus 86 rItlYRrailDywae~eetlgd~vthvliHEIgHhFGLsDd 126 (136)
T COG3824 86 RITLYRRALLDYWAENEETLGDQVTHVLIHEIGHHFGLSDD 126 (136)
T ss_pred eeeeeHHHHHHHHhhhhhhHhhHhhhhhhhhhhhhcCCChh
Confidence 46777777888888888899999999999999999998763
No 265
>cd04280 ZnMc_astacin_like Zinc-dependent metalloprotease, astacin_like subfamily or peptidase family M12A, a group of zinc-dependent proteolytic enzymes with a HExxH zinc-binding site/active site. Members of this family may have an amino terminal propeptide, which is cleaved to yield the active protease domain, which is consequently always found at the N-terminus in multi-domain architectures. This family includes: astacin, a digestive enzyme from Crayfish; meprin, a multiple domain membrane component that is constructed from a homologous alpha and beta chain, proteins involved in (bone) morphogenesis, tolloid from drosophila, and the sea urchin SPAN protein, which may also play a role in development.
Probab=44.62 E-value=11 Score=36.31 Aligned_cols=19 Identities=53% Similarity=0.691 Sum_probs=16.2
Q ss_pred HHHHHHhhhhhcCCCCCCC
Q 007731 242 RILMVHGLLHLLGFDHEIS 260 (591)
Q Consensus 242 ~~l~vHG~LHLlGyDh~~~ 260 (591)
...++|.++|.||+-||..
T Consensus 75 ~g~v~HE~~HalG~~HEh~ 93 (180)
T cd04280 75 LGTIVHELMHALGFYHEQS 93 (180)
T ss_pred CchhHHHHHHHhcCcchhc
Confidence 3679999999999999763
No 266
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=44.57 E-value=57 Score=33.74 Aligned_cols=41 Identities=5% Similarity=0.072 Sum_probs=35.6
Q ss_pred CCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCC
Q 007731 336 KISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLV 376 (591)
Q Consensus 336 ~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~ 376 (591)
.+.+...+.+..|+++|++++|+||-....+..+++.+++.
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~ 161 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVY 161 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCC
Confidence 34566789999999999999999999988999999988874
No 267
>smart00235 ZnMc Zinc-dependent metalloprotease. Neutral zinc metallopeptidases. This alignment represents a subset of known subfamilies. Highest similarity occurs in the HExxH zinc-binding site/ active site.
Probab=44.55 E-value=12 Score=34.02 Aligned_cols=17 Identities=47% Similarity=0.599 Sum_probs=15.5
Q ss_pred HHHHhhhhhcCCCCCCC
Q 007731 244 LMVHGLLHLLGFDHEIS 260 (591)
Q Consensus 244 l~vHG~LHLlGyDh~~~ 260 (591)
.++|.+.|.||+.|+..
T Consensus 89 ~~~HEigHaLGl~H~~~ 105 (140)
T smart00235 89 VAAHELGHALGLYHEQS 105 (140)
T ss_pred cHHHHHHHHhcCCcCCC
Confidence 79999999999999864
No 268
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=43.15 E-value=34 Score=34.89 Aligned_cols=40 Identities=13% Similarity=0.204 Sum_probs=34.9
Q ss_pred CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCC
Q 007731 337 ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLV 376 (591)
Q Consensus 337 is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~ 376 (591)
+.+.+.+.|+.|+++|++++|+|+.+...+..+++.+|+.
T Consensus 110 l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 149 (260)
T PLN03243 110 LRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGME 149 (260)
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCH
Confidence 3456789999999999999999999999999999988873
No 269
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=43.13 E-value=37 Score=32.97 Aligned_cols=39 Identities=21% Similarity=0.290 Sum_probs=34.5
Q ss_pred CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 337 ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 337 is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
+.+...+.|+.++++|+.++++||.....+...++.+++
T Consensus 94 ~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l 132 (226)
T PRK13222 94 LYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGI 132 (226)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 456779999999999999999999998888889888887
No 270
>cd04279 ZnMc_MMP_like_1 Zinc-dependent metalloprotease; MMP_like sub-family 1. A group of bacterial, archaeal, and fungal metalloproteinase domains similar to matrix metalloproteinases and astacin.
Probab=42.82 E-value=19 Score=33.46 Aligned_cols=22 Identities=27% Similarity=0.502 Sum_probs=19.6
Q ss_pred HHHHHHHHHhhhhhcCCCCCCC
Q 007731 239 DEIRILMVHGLLHLLGFDHEIS 260 (591)
Q Consensus 239 ~~~~~l~vHG~LHLlGyDh~~~ 260 (591)
..+...++|.|-|.||.+|+.+
T Consensus 102 ~~~~~~~~HEiGHaLGL~H~~~ 123 (156)
T cd04279 102 ENLQAIALHELGHALGLWHHSD 123 (156)
T ss_pred hHHHHHHHHHhhhhhcCCCCCC
Confidence 4788999999999999999864
No 271
>PF01457 Peptidase_M8: Leishmanolysin This Prosite motif covers only the active site. This is family M8 in the peptidase classification. ; InterPro: IPR001577 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M8 (leishmanolysin family, clan MA(M)). The protein fold of the peptidase domain for members of this family resembles that of thermolysin, the type example for clan MA. Leishmanolysin is an enzyme found in the eukaryotes including Leishmania and related parasitic protozoa []. The endopeptidase is the most abundant protein on the cell surface during the promastigote stage of the parasite, and is attached to the membrane by a glycosylphosphatidylinositol anchor []. In the amastigote form, the parasite lives in lysosomes of host macrophages, producing a form of the protease that has an acidic pH optimum []. This differs from most other metalloproteases and may be an adaptation to the environment in which the organism survives [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis, 0007155 cell adhesion, 0016020 membrane; PDB: 1LML_A.
Probab=42.56 E-value=12 Score=42.17 Aligned_cols=37 Identities=24% Similarity=0.338 Sum_probs=25.3
Q ss_pred cccccEEeeHHHHHHHHHHhCCCHHHHHHHHHHHhhhhhcCCCC
Q 007731 214 LMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDH 257 (591)
Q Consensus 214 ~~lGdi~i~~~~~~~~a~~~~~~~~~~~~~l~vHG~LHLlGyDh 257 (591)
++.|-|-||+..+..+ ..+.+.++++|.+.|.|||..
T Consensus 190 P~~G~in~~p~~i~~~-------~~~~~~~~~~HEi~HaLGFs~ 226 (521)
T PF01457_consen 190 PIAGVININPSYIPSF-------YFQEFFRTVIHEIAHALGFSS 226 (521)
T ss_dssp EEEEEEE--GGG---S---------HHHHHHHHHHHHHHTT-SH
T ss_pred CeeEEEEEchhHccch-------hhhcccceeeeeeeeeeeecc
Confidence 4789999999877654 456788999999999999985
No 272
>PRK04351 hypothetical protein; Provisional
Probab=41.99 E-value=1.9e+02 Score=26.98 Aligned_cols=74 Identities=12% Similarity=0.080 Sum_probs=47.3
Q ss_pred HHHHHHHHHhCCCCCCcEeeccCCCCCC-CCCccccccEEeeHHHHHHH-HHHhCCCHHHHHHHHHHHhhhhhcCCCCC
Q 007731 182 FIRKLNKEWRDEDHATDVLSMSQHVPEL-KLPILMLGDIVISVETAARQ-AEERGHSLLDEIRILMVHGLLHLLGFDHE 258 (591)
Q Consensus 182 ~~~~lN~~~r~~d~~TdVlSF~~~~~~~-~~~~~~lGdi~i~~~~~~~~-a~~~~~~~~~~~~~l~vHG~LHLlGyDh~ 258 (591)
-.++++.+|.+.+-+- -++|....-.. ..-..--.+|-+++-..... -+.....+.+|++|+.+|-. =-||-|.
T Consensus 9 l~~~~s~~~F~~~f~~-~v~~n~RlrttgG~~~l~~~~I~lnp~ll~~~~~~~l~~vv~HElcH~~~~~~--g~g~~h~ 84 (149)
T PRK04351 9 LVEEISLEYFGKPFRH-QAYFNKRLRTTGGRYLLKDHHIEFNPKMLEEYGLEELIGIIKHELCHYHLHLE--GKGYQHR 84 (149)
T ss_pred HHHHHHHHHhCCCCCc-EEEEeccchhhhheeecCCCeEEeCHHHHhhccHHHHHhhHHHHHHHHHHHHH--CCCCCCC
Confidence 3567899999998886 77885432110 00001247899997777651 33445579999999987743 2567775
No 273
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=40.09 E-value=24 Score=39.30 Aligned_cols=23 Identities=22% Similarity=0.365 Sum_probs=18.2
Q ss_pred eEEEEecCCCccCCCCCCCHHHH
Q 007731 320 RYIFCDMDGTLLNSQSKISLTTA 342 (591)
Q Consensus 320 KlI~fDLDGTLld~~~~is~~~~ 342 (591)
..++||+||||+.+.+..+.-.+
T Consensus 9 ~~~~fD~DGTLlrs~ssFpyFml 31 (498)
T PLN02499 9 YSVVSELEGTLLKDADPFSYFML 31 (498)
T ss_pred ceEEEecccceecCCCccHHHHH
Confidence 57999999999997666665555
No 274
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=39.80 E-value=40 Score=34.63 Aligned_cols=39 Identities=21% Similarity=0.237 Sum_probs=34.9
Q ss_pred CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 337 ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 337 is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
+.+...+.|+.|+++|++++|+|+.+...+...++.+|+
T Consensus 143 l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl 181 (273)
T PRK13225 143 LFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGL 181 (273)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 345678999999999999999999999999999999887
No 275
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=39.11 E-value=51 Score=32.93 Aligned_cols=34 Identities=18% Similarity=0.116 Sum_probs=27.5
Q ss_pred HHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCC
Q 007731 521 SGVKMLLDHLGVSTKEIMAIGDGENDVEMLELAS 554 (591)
Q Consensus 521 ~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag 554 (591)
..+...++++|+++..++++||+.+|+.-+...+
T Consensus 82 ~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 82 QMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred HHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 4566666778888899999999999998886554
No 276
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=38.62 E-value=42 Score=31.40 Aligned_cols=38 Identities=18% Similarity=0.215 Sum_probs=31.6
Q ss_pred CCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 336 KISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 336 ~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
.+.+...+.|+.|+++|++++++|+. ..+...++.+++
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l 125 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGL 125 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcCh
Confidence 45667899999999999999999998 567777887776
No 277
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=37.44 E-value=40 Score=34.14 Aligned_cols=38 Identities=18% Similarity=0.171 Sum_probs=32.2
Q ss_pred CHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 338 SLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 338 s~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
.+...+.|+.|+++|++++|+||.+...+..+++.+++
T Consensus 103 ~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l 140 (267)
T PRK13478 103 IPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAA 140 (267)
T ss_pred CCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhh
Confidence 44578899999999999999999999888888877665
No 278
>PF00413 Peptidase_M10: Matrixin This Prosite motif covers only the active site.; InterPro: IPR001818 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M10 (clan MA(M)). The protein fold of the peptidase domain for members of this family resembles that of thermolysin, the type example for clan MA. Sequences having this domain are extracellular metalloproteases, such as collagenase and stromelysin, which degrade the extracellular matrix, are known as matrixins. They are zinc-dependent, calcium-activated proteases synthesised as inactive precursors (zymogens), which are proteolytically cleaved to yield the active enzyme [, ]. All matrixins and related proteins possess 2 domains: an N-terminal domain, and a zinc-binding active site domain. The N-terminal domain peptide, cleaved during the activation step, includes a conserved PRCGVPDV octapeptide, known as the cysteine switch, whose Cys residue chelates the active site zinc atom, rendering the enzyme inactive [, ]. The active enzyme degrades components of the extracellular matrix, playing a role in the initial steps of tissue remodelling during morphogenesis, wound healing, angiogenesis and tumour invasion [, ].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis, 0031012 extracellular matrix; PDB: 1Q3A_C 3V96_B 1HV5_D 1CXV_A 1SRP_A 1FBL_A 1ZVX_A 1JH1_A 1I76_A 2OY4_A ....
Probab=37.22 E-value=20 Score=32.81 Aligned_cols=21 Identities=29% Similarity=0.646 Sum_probs=18.6
Q ss_pred HHHHHHHHHhhhhhcCCCCCC
Q 007731 239 DEIRILMVHGLLHLLGFDHEI 259 (591)
Q Consensus 239 ~~~~~l~vHG~LHLlGyDh~~ 259 (591)
.++...++|+|-|.||.+|..
T Consensus 103 ~~~~~v~~HEiGHaLGL~H~~ 123 (154)
T PF00413_consen 103 NDLQSVAIHEIGHALGLDHSN 123 (154)
T ss_dssp EEHHHHHHHHHHHHTTBESSS
T ss_pred hhhhhhhhhccccccCcCcCC
Confidence 367889999999999999975
No 279
>PF01863 DUF45: Protein of unknown function DUF45; InterPro: IPR002725 Members of this family are found in some archaebacteria, as well as Helicobacter pylori. The proteins are 190-240 amino acids long, with the C terminus being the most conserved region, containing three conserved histidines.
Probab=35.61 E-value=43 Score=32.35 Aligned_cols=55 Identities=20% Similarity=0.290 Sum_probs=35.5
Q ss_pred HHHHHHhCCCCCCcEeeccCCCCCCCCCccccccEEeeHHHHHHHHHHhCCCHHHHHHHHHHHhhhhhcCCCCCCCHHHH
Q 007731 185 KLNKEWRDEDHATDVLSMSQHVPELKLPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEEAE 264 (591)
Q Consensus 185 ~lN~~~r~~d~~TdVlSF~~~~~~~~~~~~~lGdi~i~~~~~~~~a~~~~~~~~~~~~~l~vHG~LHLlGyDh~~~~~~~ 264 (591)
.+...|=.. ..++.|+|....- +-..+-+-+++||.++||..-||. .+=.
T Consensus 136 ~~ksrWGsc-~~~~~I~ln~~L~---------------------------~~P~~~idYVvvHEL~Hl~~~nHs--~~Fw 185 (205)
T PF01863_consen 136 DMKSRWGSC-SSKGNITLNWRLV---------------------------MAPPEVIDYVVVHELCHLRHPNHS--KRFW 185 (205)
T ss_pred ehhhccccC-CCCCcEEeecccc---------------------------cCCccHHHHHHHHHHHHhccCCCC--HHHH
Confidence 455667666 7788888843210 111235678999999999999995 4434
Q ss_pred HHHHH
Q 007731 265 AEMEK 269 (591)
Q Consensus 265 ~~M~~ 269 (591)
+.|+.
T Consensus 186 ~~v~~ 190 (205)
T PF01863_consen 186 ALVEK 190 (205)
T ss_pred HHHHH
Confidence 44443
No 280
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=35.48 E-value=54 Score=32.39 Aligned_cols=40 Identities=15% Similarity=0.160 Sum_probs=34.0
Q ss_pred CCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 336 KISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 336 ~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
.+.+...+.|+.|+++|++++++|+.+...+...++.+|+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l 132 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGL 132 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCc
Confidence 3456678999999999999999999888888888888776
No 281
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=34.86 E-value=51 Score=33.71 Aligned_cols=39 Identities=18% Similarity=0.240 Sum_probs=33.7
Q ss_pred CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 337 ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 337 is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
+.+...+.|+.|+++|++++++||.+...+...++.+++
T Consensus 102 ~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i 140 (272)
T PRK13223 102 VYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKI 140 (272)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCc
Confidence 456678999999999999999999988888888888776
No 282
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=34.38 E-value=1.6e+02 Score=25.48 Aligned_cols=71 Identities=14% Similarity=0.252 Sum_probs=40.7
Q ss_pred ChhhHHHhHHHHHHHh-ccCC-eEEEEecCCeeeecCCCC--CHHHHHHHHHHHcCCCCCcEEEEecCh-hhHHHHHH
Q 007731 480 TAEGVATTIRPYWSEA-TKDR-ANVVQAIPDMLEIVPPGT--SKGSGVKMLLDHLGVSTKEIMAIGDGE-NDVEMLEL 552 (591)
Q Consensus 480 ~~~~~~~~l~~~l~~~-~~~~-~~vv~s~~~~iEI~p~gv--sKg~AL~~L~e~lgI~~eeviafGDs~-NDi~Mlk~ 552 (591)
.+-++...+.+.+... +... +.....+.....+...+. .|-..|+.+++.+ +....+.||||. -|.+.-..
T Consensus 8 SPwnly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~f--P~~kfiLIGDsgq~DpeiY~~ 83 (100)
T PF09949_consen 8 SPWNLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDF--PERKFILIGDSGQHDPEIYAE 83 (100)
T ss_pred CHHHHHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHC--CCCcEEEEeeCCCcCHHHHHH
Confidence 3444445555555442 2222 222222233333443333 7999999999886 557899999975 58776544
No 283
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=34.35 E-value=62 Score=30.03 Aligned_cols=38 Identities=18% Similarity=0.191 Sum_probs=30.1
Q ss_pred CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 337 ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 337 is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
+.+...+.|+.|+++|++++++|+.+... ......+|+
T Consensus 86 ~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l 123 (183)
T TIGR01509 86 PLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGL 123 (183)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCC
Confidence 45667899999999999999999988776 555554666
No 284
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=34.26 E-value=63 Score=31.87 Aligned_cols=39 Identities=13% Similarity=-0.011 Sum_probs=33.2
Q ss_pred CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 337 ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 337 is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
+.+.+.+.|+.|+++|+.++++|+.+...+...++.+++
T Consensus 96 ~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l 134 (229)
T PRK13226 96 LFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGW 134 (229)
T ss_pred eCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCc
Confidence 345678889999999999999999998888888888876
No 285
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=33.54 E-value=1.9e+02 Score=30.47 Aligned_cols=40 Identities=18% Similarity=0.096 Sum_probs=34.2
Q ss_pred CCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 336 KISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 336 ~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
.+.+...+.|+.+++.|++++|+||........+.+.+++
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgl 220 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRL 220 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCC
Confidence 3677889999999999999999999887777777888887
No 286
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=33.07 E-value=62 Score=35.04 Aligned_cols=39 Identities=5% Similarity=0.171 Sum_probs=34.6
Q ss_pred CHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCC
Q 007731 338 SLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLV 376 (591)
Q Consensus 338 s~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~ 376 (591)
-+...+.|+.|+++|++++|+|+++...+..+++.+|+.
T Consensus 218 ~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~ 256 (381)
T PLN02575 218 RTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIR 256 (381)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCH
Confidence 355689999999999999999999999999999998873
No 287
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=32.92 E-value=28 Score=27.47 Aligned_cols=27 Identities=37% Similarity=0.735 Sum_probs=17.8
Q ss_pred HHHHHHHHcCCCCCcEEEEecChhhHHHHHH
Q 007731 522 GVKMLLDHLGVSTKEIMAIGDGENDVEMLEL 552 (591)
Q Consensus 522 AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ 552 (591)
=|+.+++++|+ ++++||-.-|++|++.
T Consensus 6 DVqQLLK~fG~----~IY~gdr~~DielM~~ 32 (62)
T PF06014_consen 6 DVQQLLKKFGI----IIYVGDRLWDIELMEI 32 (62)
T ss_dssp HHHHHHHTTS---------S-HHHHHHHHHH
T ss_pred HHHHHHHHCCE----EEEeCChHHHHHHHHH
Confidence 36778899987 8999999999999874
No 288
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=31.99 E-value=60 Score=25.61 Aligned_cols=23 Identities=35% Similarity=0.401 Sum_probs=18.8
Q ss_pred CCC-HHHHHHHHHHHhcCCeEEEE
Q 007731 336 KIS-LTTAKALKEALSRGLKVVVA 358 (591)
Q Consensus 336 ~is-~~~~eaL~~L~~~Gi~vvia 358 (591)
.++ +...+.|.++.++|.+++++
T Consensus 46 ~~~~~~~~~~l~~~v~~G~~lvl~ 69 (70)
T PF14258_consen 46 RLSEPEEAEALLEWVEAGNTLVLA 69 (70)
T ss_pred CCCchHHHHHHHHHHHcCCEEEEe
Confidence 355 47788999999999999886
No 289
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=31.77 E-value=77 Score=30.92 Aligned_cols=39 Identities=15% Similarity=0.073 Sum_probs=33.5
Q ss_pred CCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcC
Q 007731 336 KISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVD 374 (591)
Q Consensus 336 ~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lg 374 (591)
.+.+...+.|+.+.++|++++|+||.....+..+++.++
T Consensus 70 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~ 108 (214)
T TIGR03333 70 EIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIV 108 (214)
T ss_pred cccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhC
Confidence 456778899999999999999999998888888888764
No 290
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=30.78 E-value=59 Score=31.00 Aligned_cols=58 Identities=22% Similarity=0.251 Sum_probs=39.8
Q ss_pred ceEEEEecCCCccCCC--------------C-----------CCCHHHHHHHHHHHhcCCeEEEEcCC-ChhHHHHHHHh
Q 007731 319 FRYIFCDMDGTLLNSQ--------------S-----------KISLTTAKALKEALSRGLKVVVATGK-TRPAVISALKK 372 (591)
Q Consensus 319 iKlI~fDLDGTLld~~--------------~-----------~is~~~~eaL~~L~~~Gi~vviaTGR-s~~~~~~~l~~ 372 (591)
.|+|+||||+||-+.. + .+.+....+|+.|+++|+++++||=- .+..++++++.
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~ 82 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKL 82 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHh
Confidence 3799999999998631 1 14578899999999999999999943 45678889999
Q ss_pred cCCC
Q 007731 373 VDLV 376 (591)
Q Consensus 373 lgl~ 376 (591)
+++.
T Consensus 83 l~i~ 86 (169)
T PF12689_consen 83 LEID 86 (169)
T ss_dssp TT-C
T ss_pred cCCC
Confidence 8873
No 291
>PTZ00257 Glycoprotein GP63 (leishmanolysin); Provisional
Probab=30.41 E-value=50 Score=37.90 Aligned_cols=37 Identities=19% Similarity=0.257 Sum_probs=29.5
Q ss_pred cccccEEeeHHHHHHHHHHhCCCHHHHHHHHHHHhhhhhcCCCC
Q 007731 214 LMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDH 257 (591)
Q Consensus 214 ~~lGdi~i~~~~~~~~a~~~~~~~~~~~~~l~vHG~LHLlGyDh 257 (591)
+..|=|.|++..+. .+...+..+.++|+++|.|||.-
T Consensus 236 Pi~G~iNinp~~i~-------s~~~~~~~rv~~HEi~HALGFS~ 272 (622)
T PTZ00257 236 PAVGVMNIPAANIV-------SRYDQGTTRTVTHEVAHALGFSS 272 (622)
T ss_pred ceEEEEeeCHHHCC-------CccchHHHHHHHHHHHHHhcCCH
Confidence 46899999997764 13345778999999999999975
No 292
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=29.81 E-value=52 Score=30.88 Aligned_cols=33 Identities=12% Similarity=0.167 Sum_probs=26.4
Q ss_pred HHHHHcCCCCCcEEEEecChhhHHHHHHCCceE
Q 007731 525 MLLDHLGVSTKEIMAIGDGENDVEMLELASLGI 557 (591)
Q Consensus 525 ~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gV 557 (591)
+-+..+|.++++|+.|||+..|+.+...+|+-+
T Consensus 103 K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i 135 (162)
T TIGR02251 103 KDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPI 135 (162)
T ss_pred eEchhcCCChhhEEEEeCChhhhccCccCEeec
Confidence 345667889999999999999988877776543
No 293
>cd04277 ZnMc_serralysin_like Zinc-dependent metalloprotease, serralysin_like subfamily. Serralysins and related proteases are important virulence factors in pathogenic bacteria. They may be secreted into the medium via a mechanism found in gram-negative bacteria, that does not require n-terminal signal sequences which are cleaved after the transmembrane translocation. A calcium-binding domain c-terminal to the metalloprotease domain, which contains multiple tandem repeats of a nine-residue motif including the pattern GGxGxD, and which forms a parallel beta roll may be involved in the translocation mechanism and/or substrate binding. Serralysin family members may have a broad spectrum of substrates each, including host immunoglobulins, complement proteins, cell matrix and cytoskeletal proteins, as well as antimicrobial peptides.
Probab=29.09 E-value=36 Score=32.54 Aligned_cols=40 Identities=23% Similarity=0.184 Sum_probs=28.2
Q ss_pred ccccEEeeHHHHHHHHHHhCCCHHHHHHHHHHHhhhhhcCCCCCC
Q 007731 215 MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEI 259 (591)
Q Consensus 215 ~lGdi~i~~~~~~~~a~~~~~~~~~~~~~l~vHG~LHLlGyDh~~ 259 (591)
.-|+|.|.......-. .........++|.+.|.||..|.-
T Consensus 92 ~~g~i~~~~~~~~~~~-----~~g~~~~~t~~HEiGHaLGL~H~~ 131 (186)
T cd04277 92 YGGDIWFNSSYDTNSD-----SPGSYGYQTIIHEIGHALGLEHPG 131 (186)
T ss_pred ccceeEEecCcccccC-----CCChhhHHHHHHHHHHHhcCCCCC
Confidence 3588888754322111 334567899999999999999975
No 294
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=29.03 E-value=95 Score=31.74 Aligned_cols=54 Identities=20% Similarity=0.257 Sum_probs=39.0
Q ss_pred EEEecCCCccCCCCC--------------------------CCHHHHHHHHHHHhc------CCeEEEEcCCChhHHH--
Q 007731 322 IFCDMDGTLLNSQSK--------------------------ISLTTAKALKEALSR------GLKVVVATGKTRPAVI-- 367 (591)
Q Consensus 322 I~fDLDGTLld~~~~--------------------------is~~~~eaL~~L~~~------Gi~vviaTGRs~~~~~-- 367 (591)
|+||-|++|.++... .-......|.+++++ -+.+.++|.|+-+.-.
T Consensus 124 IAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~Rv 203 (264)
T PF06189_consen 124 IAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHERV 203 (264)
T ss_pred EEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhHHH
Confidence 799999999986431 224677777777764 3689999999876544
Q ss_pred -HHHHhcCC
Q 007731 368 -SALKKVDL 375 (591)
Q Consensus 368 -~~l~~lgl 375 (591)
+.++.||+
T Consensus 204 I~TLr~Wgv 212 (264)
T PF06189_consen 204 IRTLRSWGV 212 (264)
T ss_pred HHHHHHcCC
Confidence 45566776
No 295
>cd04278 ZnMc_MMP Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate specification, cell migration, tissue repair, tumorigenesis, gain or loss of tissue-specific functions, and apoptosis. In many instances, they are anchored to cell membranes via trans-membrane domains, and their activity is controlled via TIMPs (tissue inhibitors of metalloproteinases).
Probab=28.83 E-value=36 Score=31.59 Aligned_cols=76 Identities=18% Similarity=0.165 Sum_probs=42.7
Q ss_pred eeeEEEEEeChHHHHHHHHHHhCCCCCCcEeeccCCCCCCCCCccccccEEeeHHHHHHHHHHhCCCHHHHHHHHHHHhh
Q 007731 170 SIELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPELKLPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGL 249 (591)
Q Consensus 170 ~~e~~i~~~~~~~~~~lN~~~r~~d~~TdVlSF~~~~~~~~~~~~~lGdi~i~~~~~~~~a~~~~~~~~~~~~~l~vHG~ 249 (591)
.+++.|.|.+...-. +. .-+.+.++|.+.+. |. ..-|+|.+..+.... ...+ .-...+...++|+|
T Consensus 50 ~adi~I~~~~~~~~~--~~---~~~~~~g~l~~a~~-p~-----~~~g~i~~~~~~~~~--~~~~-~~~~~~~~~~~HEi 115 (157)
T cd04278 50 EADIRISFARGNHGD--GY---PFDGPGGTLAHAFF-PG-----GIGGDIHFDDDEQWT--LGSD-SGGTDLFSVAAHEI 115 (157)
T ss_pred CCCEEEEEeecccCC--CC---CCCCCccccccccC-CC-----CcceeEEECCCcccc--cCCC-CccchHHHHHHHHh
Confidence 356777777544211 11 12344567766432 21 135888886432110 0000 12346899999999
Q ss_pred hhhcCCCCCC
Q 007731 250 LHLLGFDHEI 259 (591)
Q Consensus 250 LHLlGyDh~~ 259 (591)
-|.||.+|..
T Consensus 116 GHaLGL~H~~ 125 (157)
T cd04278 116 GHALGLGHSS 125 (157)
T ss_pred ccccccCCCC
Confidence 9999999975
No 296
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=28.44 E-value=71 Score=28.95 Aligned_cols=34 Identities=24% Similarity=0.209 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhc
Q 007731 340 TTAKALKEALSRGLKVVVATGKTRPAVISALKKV 373 (591)
Q Consensus 340 ~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~l 373 (591)
...+.|+.|+++|++++++|+++...+...++.+
T Consensus 68 g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 68 GAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred CHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 4788999999999999999999988888777764
No 297
>PRK13267 archaemetzincin-like protein; Reviewed
Probab=28.20 E-value=48 Score=31.92 Aligned_cols=23 Identities=30% Similarity=0.447 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHhhhhhcCCCCCC
Q 007731 237 LLDEIRILMVHGLLHLLGFDHEI 259 (591)
Q Consensus 237 ~~~~~~~l~vHG~LHLlGyDh~~ 259 (591)
+.+.+...++|.+-|++|.+|=.
T Consensus 121 ~~~R~~k~~~HElGH~lGL~HC~ 143 (179)
T PRK13267 121 FEERVRKEVTHELGHTLGLEHCD 143 (179)
T ss_pred HHHHHHHHHHHHHHHHcCCccCC
Confidence 55677778999999999999954
No 298
>cd00203 ZnMc Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which are involved in vertebrate development and disease.
Probab=26.96 E-value=32 Score=31.85 Aligned_cols=21 Identities=38% Similarity=0.466 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhcCCCCCC
Q 007731 239 DEIRILMVHGLLHLLGFDHEI 259 (591)
Q Consensus 239 ~~~~~l~vHG~LHLlGyDh~~ 259 (591)
.....+++|.+-|.||..|+.
T Consensus 94 ~~~~~~~~HElGH~LGl~H~~ 114 (167)
T cd00203 94 KEGAQTIAHELGHALGFYHDH 114 (167)
T ss_pred ccchhhHHHHHHHHhCCCccC
Confidence 468899999999999999975
No 299
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=26.70 E-value=1.1e+02 Score=32.55 Aligned_cols=37 Identities=14% Similarity=0.041 Sum_probs=33.6
Q ss_pred CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhc
Q 007731 337 ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKV 373 (591)
Q Consensus 337 is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~l 373 (591)
..+...+.|++++++|.+++++|+.+...+..+++.+
T Consensus 185 ~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l 221 (343)
T TIGR02244 185 RDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYL 221 (343)
T ss_pred cchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 3678899999999999999999999999999888875
No 300
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=26.59 E-value=77 Score=35.02 Aligned_cols=38 Identities=8% Similarity=0.024 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCC
Q 007731 339 LTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLV 376 (591)
Q Consensus 339 ~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~ 376 (591)
+...+.|+.|+++|++++++|+.+...+...++.+++.
T Consensus 333 pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~ 370 (459)
T PRK06698 333 PNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLD 370 (459)
T ss_pred CCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcH
Confidence 34567788888899999999999999999999988873
No 301
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=26.54 E-value=1.9e+02 Score=30.88 Aligned_cols=39 Identities=21% Similarity=0.217 Sum_probs=32.3
Q ss_pred HHHHHHHHHcCCCCCcEEEEecCh-hhHHHHH-HCCc-eEEe
Q 007731 521 SGVKMLLDHLGVSTKEIMAIGDGE-NDVEMLE-LASL-GIAL 559 (591)
Q Consensus 521 ~AL~~L~e~lgI~~eeviafGDs~-NDi~Mlk-~ag~-gVAm 559 (591)
-.+..+.+.+|+..+++++|||.. .|+--.+ .+|. +|++
T Consensus 281 Gn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI 322 (343)
T TIGR02244 281 GSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAI 322 (343)
T ss_pred CCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEE
Confidence 557788899999999999999985 7988787 7885 6655
No 302
>COG0021 TktA Transketolase [Carbohydrate transport and metabolism]
Probab=26.50 E-value=6.8e+02 Score=29.09 Aligned_cols=96 Identities=16% Similarity=0.192 Sum_probs=49.9
Q ss_pred EEEEecCCCccCCCCCCCHHHHHHHHHHHhcCCeEE-EEcCCChhHHHHHHHhcCCCC-CCceeecCCCEEEecCEEEEc
Q 007731 321 YIFCDMDGTLLNSQSKISLTTAKALKEALSRGLKVV-VATGKTRPAVISALKKVDLVG-RDGIISEFAPGVFIQGLLVHG 398 (591)
Q Consensus 321 lI~fDLDGTLld~~~~is~~~~eaL~~L~~~Gi~vv-iaTGRs~~~~~~~l~~lgl~~-~d~~I~eng~~I~~NGA~I~d 398 (591)
+++-|--+.=+|..-.+.- +.+.-+++...|+.++ ..-|-.+..+...+++-.... .-.+|.. -+.|.. |+.-.
T Consensus 181 IvlyD~N~IsiDG~~~~~f-~ed~~~RfeAyGW~vi~~~DG~D~e~I~~Ai~~Ak~~~dkPtlI~~-kTiIG~-Gsp~k- 256 (663)
T COG0021 181 IVLYDSNDISIDGDTSLSF-TEDVAKRFEAYGWNVIRVIDGHDLEAIDKAIEEAKASTDKPTLIIV-KTIIGK-GSPNK- 256 (663)
T ss_pred EEEEeCCCceeccCccccc-chhHHHHHHhcCCeEEEecCCCCHHHHHHHHHHHHhcCCCCeEEEE-Eeeeec-CCCCc-
Confidence 3444544444433222211 3445556777899999 888998888877766543311 2223322 223332 33211
Q ss_pred CCC-cEEEeecCCHHHHHHHHHHH
Q 007731 399 RQG-REIFRRNLDRDFCREAYQYS 421 (591)
Q Consensus 399 ~~g-~~i~~~~l~~e~v~eil~~l 421 (591)
.| ...+-.++..+.+....+.+
T Consensus 257 -egt~~~HGapLg~~ev~~~k~~l 279 (663)
T COG0021 257 -EGTHKVHGAPLGEEEVAAAKKAL 279 (663)
T ss_pred -CCCccccCCCCCHHHHHHHHHHh
Confidence 22 23355678877777665544
No 303
>cd04276 ZnMc_MMP_like_2 Zinc-dependent metalloprotease; MMP_like sub-family 2. A group of bacterial metalloproteinase domains similar to matrix metalloproteinases and astacin.
Probab=25.77 E-value=46 Score=32.55 Aligned_cols=45 Identities=20% Similarity=0.312 Sum_probs=30.7
Q ss_pred ccccEEeeHHHHHHHHHHhCCCHHHHHHHHHHHhhhhhcCCCCCC
Q 007731 215 MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEI 259 (591)
Q Consensus 215 ~lGdi~i~~~~~~~~a~~~~~~~~~~~~~l~vHG~LHLlGyDh~~ 259 (591)
+-|||.+-..........+.....+-+..+++|.+-|.||..|.-
T Consensus 90 l~a~V~l~~~~~~~~~~~~~~~~~~~~~~~~~he~gh~lGl~hn~ 134 (197)
T cd04276 90 LKADVILYSGFLRQDQLWYEDLLAASLRYLLAHEVGHTLGLRHNF 134 (197)
T ss_pred EEEEEEeCchhhccchhHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 347777765555443333322333778899999999999999953
No 304
>PF14174 YycC: YycC-like protein
Probab=25.68 E-value=70 Score=24.04 Aligned_cols=20 Identities=35% Similarity=0.351 Sum_probs=18.1
Q ss_pred EeeHHHHHHHHHHhCCCHHH
Q 007731 220 VISVETAARQAEERGHSLLD 239 (591)
Q Consensus 220 ~i~~~~~~~~a~~~~~~~~~ 239 (591)
=||+||+.+-|+..|.++++
T Consensus 5 qIS~eTA~kLs~~L~vPlE~ 24 (53)
T PF14174_consen 5 QISPETAVKLSKKLGVPLEQ 24 (53)
T ss_pred ccCHHHHHHHHHHHCCcHHH
Confidence 48999999999999998874
No 305
>PF12388 Peptidase_M57: Dual-action HEIGH metallo-peptidase; InterPro: IPR024653 This entry represents the metallopeptidases M10, M27 and M57. The catalytic triad for proteases in this entry is HE-H-H, which in many members is in the sequence motif HEIGH [].
Probab=24.78 E-value=47 Score=32.85 Aligned_cols=20 Identities=30% Similarity=0.615 Sum_probs=17.4
Q ss_pred HHHHHHHHHhhhhhcCCCCC
Q 007731 239 DEIRILMVHGLLHLLGFDHE 258 (591)
Q Consensus 239 ~~~~~l~vHG~LHLlGyDh~ 258 (591)
+-..|.++|+|-|-+||=|.
T Consensus 131 ~~~~hvi~HEiGH~IGfRHT 150 (211)
T PF12388_consen 131 NVIEHVITHEIGHCIGFRHT 150 (211)
T ss_pred hHHHHHHHHHhhhhcccccc
Confidence 44777999999999999994
No 306
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=24.52 E-value=1e+02 Score=29.37 Aligned_cols=38 Identities=24% Similarity=0.254 Sum_probs=30.1
Q ss_pred CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 337 ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 337 is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
+.+.+.++|+.|+++|++++++|+.+. .+...++.+++
T Consensus 106 ~~~g~~~~l~~L~~~g~~~~i~Sn~~~-~~~~~l~~~~l 143 (203)
T TIGR02252 106 VYPDAIKLLKDLRERGLILGVISNFDS-RLRGLLEALGL 143 (203)
T ss_pred eCcCHHHHHHHHHHCCCEEEEEeCCch-hHHHHHHHCCc
Confidence 445678999999999999999998765 34667777776
No 307
>PTZ00337 surface protease GP63; Provisional
Probab=24.35 E-value=53 Score=37.48 Aligned_cols=36 Identities=19% Similarity=0.183 Sum_probs=29.5
Q ss_pred cccccEEeeHHHHHHHHHHhCCCHHHHHHHHHHHhhhhhcCCCCC
Q 007731 214 LMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHE 258 (591)
Q Consensus 214 ~~lGdi~i~~~~~~~~a~~~~~~~~~~~~~l~vHG~LHLlGyDh~ 258 (591)
.+.|=|.|++..+.. ..+..+.++|.++|.|||...
T Consensus 211 Pi~G~in~np~~i~~---------~~~~~~v~~HEi~HALGFs~~ 246 (567)
T PTZ00337 211 PFAAAVNFDPRQIAV---------TNGDVRVAAHELGHALGFVRD 246 (567)
T ss_pred ceEEEEEECHHHccc---------hhHHHHHHHHHHHHHHccCHH
Confidence 468999999988753 356778999999999999763
No 308
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=24.27 E-value=1.1e+02 Score=34.40 Aligned_cols=47 Identities=19% Similarity=0.251 Sum_probs=41.3
Q ss_pred CCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCCCCCCceeecC
Q 007731 336 KISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDLVGRDGIISEF 385 (591)
Q Consensus 336 ~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl~~~d~~I~en 385 (591)
.+-+..++-+.+|++.|++-+.|||-++..+..+..+.|+ |.|++|.
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGV---DdfiAea 493 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV---DDFIAEA 493 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCc---hhhhhcC
Confidence 4678889999999999999999999999999999999888 6677664
No 309
>PF07998 Peptidase_M54: Peptidase family M54; InterPro: IPR012962 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry represents zinc-dependent peptidases belonging to the MEROPS peptidase family M54, more commonly known as the archaemetzincins. The family has a wide taxonomic distribution, being found in archaea, bacteria and eukaryotes. Two human homologues have been characterised []. ; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding; PDB: 3LMC_A 2XHQ_A 2X7M_A.
Probab=23.62 E-value=62 Score=31.64 Aligned_cols=23 Identities=39% Similarity=0.554 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHhhhhhcCCCCCC
Q 007731 237 LLDEIRILMVHGLLHLLGFDHEI 259 (591)
Q Consensus 237 ~~~~~~~l~vHG~LHLlGyDh~~ 259 (591)
+.+.+...++|.+-|++|-+|=.
T Consensus 141 ~~~R~~Kea~HElGH~~GL~HC~ 163 (194)
T PF07998_consen 141 FLERVCKEAVHELGHLFGLDHCE 163 (194)
T ss_dssp HHHHHHHHHHHHHHHHTT----S
T ss_pred HHHHHHHHHHHHHHHHcCCcCCC
Confidence 45778889999999999999964
No 310
>COG4681 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.54 E-value=2.2e+02 Score=26.64 Aligned_cols=103 Identities=19% Similarity=0.305 Sum_probs=60.8
Q ss_pred ccccccccccccccchhhhhhh------hhhhcccCCCcc--ccccceeEEEEEecCCCCChhHHHHHHHHhhhchhHHH
Q 007731 72 VLCRREEESVVRSSRKVFAEQR------GYRKARRRVAKS--KQKELELNVSICIEDELPDDPEVLNIAEMLRLNAPTLM 143 (591)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (591)
|..+-||+--.+-.-+++|=.+ -|-|+-+-+-.| =+..+..-|+.-||-++|++..+...+...+..+
T Consensus 28 TvArHPSEt~eRmmlRlLA~~~~a~E~l~FtrGLs~~DEPelW~rn~~~~i~lWIelG~Pde~Ri~kac~q~~~va---- 103 (181)
T COG4681 28 TVARHPSETQERMMLRLLAWLKYADERLAFTRGLSADDEPELWLRNDHLGIDLWIELGLPDERRIKKACTQAAQVA---- 103 (181)
T ss_pred ehhcCCchhHHHHHHHHHHHHHhcchhhhhccCCCCCCCHHHHhhccCccEeeeeecCCccHHHHHHHHhhhhhee----
Confidence 3444455433333345555333 455555544445 3455677888889999999999988887643222
Q ss_pred HHHhhhccccccccc------chhhhccCCCceeeEEEEEeChHHHHHHHH
Q 007731 144 KLAFDSLKDSTYKTR------DTAVEDVGGFESIELSILFCNNEFIRKLNK 188 (591)
Q Consensus 144 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~e~~i~~~~~~~~~~lN~ 188 (591)
+ ..|..+ .+..+.+..+ ..+||.+++|+.+.+|-+
T Consensus 104 ---l-----~ay~~ra~rvWw~q~~~k~a~~--~NlsV~~l~~e~la~lsa 144 (181)
T COG4681 104 ---L-----FAYNSRAARVWWQQVQSKVAQF--ANLSVWYLDDEQLAKLSA 144 (181)
T ss_pred ---e-----eeecchHHHHHHHHHHHHHHhh--ccceEEecChHHHHHHHh
Confidence 1 112221 1222222222 589999999999999865
No 311
>KOG3714 consensus Meprin A metalloprotease [Posttranslational modification, protein turnover, chaperones]
Probab=23.24 E-value=33 Score=37.50 Aligned_cols=17 Identities=59% Similarity=0.851 Sum_probs=14.6
Q ss_pred HHHHhhhhhcCCCCCCC
Q 007731 244 LMVHGLLHLLGFDHEIS 260 (591)
Q Consensus 244 l~vHG~LHLlGyDh~~~ 260 (591)
.++|.++|.|||=||..
T Consensus 162 ~i~HEl~HaLGf~Hehs 178 (411)
T KOG3714|consen 162 TIVHELMHALGFWHEHS 178 (411)
T ss_pred hhHHHHHHHhhhhhccC
Confidence 58999999999988764
No 312
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=22.54 E-value=1.3e+02 Score=30.95 Aligned_cols=37 Identities=24% Similarity=0.379 Sum_probs=31.6
Q ss_pred CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhc
Q 007731 337 ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKV 373 (591)
Q Consensus 337 is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~l 373 (591)
+.+.+.+.|..|.++|++++++|+.+...+..+++.+
T Consensus 145 l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 145 LRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred chhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 4567799999999999999999999888887777654
No 313
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=22.47 E-value=1.4e+02 Score=29.53 Aligned_cols=39 Identities=23% Similarity=0.309 Sum_probs=34.8
Q ss_pred CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 337 ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 337 is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
.-+...+.|..|.++|+.++++|+.+...+...++.+|+
T Consensus 87 ~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl 125 (221)
T COG0637 87 PIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGL 125 (221)
T ss_pred CCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccC
Confidence 456679999999999999999999999899999988887
No 314
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=22.41 E-value=1.2e+02 Score=28.84 Aligned_cols=37 Identities=11% Similarity=0.056 Sum_probs=32.0
Q ss_pred CHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 338 SLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 338 s~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
.+...+.|+.++++ ++++++|+.....+..+++.+++
T Consensus 70 ~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl 106 (205)
T PRK13582 70 LPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGW 106 (205)
T ss_pred CCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCC
Confidence 35567888888888 99999999999999999999887
No 315
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=22.38 E-value=8.3e+02 Score=24.82 Aligned_cols=127 Identities=17% Similarity=0.168 Sum_probs=56.6
Q ss_pred ccHHHhhcccCeeEEEEecChhhHHHhHHHHHHHhccCCeEEEEec-----CCeeee-c---CCCCCHHHHHHH---HHH
Q 007731 461 PAIEDLLATVDIQKLIFLDTAEGVATTIRPYWSEATKDRANVVQAI-----PDMLEI-V---PPGTSKGSGVKM---LLD 528 (591)
Q Consensus 461 ~~l~~~l~~~~i~ki~~~~~~~~~~~~l~~~l~~~~~~~~~vv~s~-----~~~iEI-~---p~gvsKg~AL~~---L~e 528 (591)
..+-+.+....|.-++|..--.+....+.+.- ..+.....++... .+.+.- . -.-.||-.++.. ..+
T Consensus 96 ~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~-~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l~~~~~~~ 174 (246)
T PF05822_consen 96 EEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQA-GVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESALEDSPYFK 174 (246)
T ss_dssp HHHHHHHHCTT--EEEEEEEEHHHHHHHHHHT-T--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHHTTHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHc-CCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccccCchHHH
Confidence 33444455667777777655455444433332 2233344444211 112221 1 134678765542 223
Q ss_pred HcCCCCCcEEEEecChhhHHHHHHC---CceEEec--CCc--HHHHh---hcceecCCCChHHHHHHHHHh
Q 007731 529 HLGVSTKEIMAIGDGENDVEMLELA---SLGIALS--NGS--EKAKA---VANVIGASNDEDGVADAIYRY 589 (591)
Q Consensus 529 ~lgI~~eeviafGDs~NDi~Mlk~a---g~gVAmg--NA~--~elk~---~Ad~Vt~s~~edGVa~~L~~~ 589 (591)
.+. ...+++.+|||.-|+.|...+ ...+.+| |.. +.+.. .-|.|.-+...-.|...|-+.
T Consensus 175 ~~~-~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~v~~~il~~ 244 (246)
T PF05822_consen 175 QLK-KRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMDVPNAILQS 244 (246)
T ss_dssp CTT-T--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-HHHHHHHHH
T ss_pred Hhc-cCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCchHHHHHHHH
Confidence 332 357899999999999999876 2233332 433 22322 345555443344455544433
No 316
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=22.19 E-value=1.3e+02 Score=29.84 Aligned_cols=38 Identities=21% Similarity=0.223 Sum_probs=31.5
Q ss_pred CCCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhc
Q 007731 336 KISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKV 373 (591)
Q Consensus 336 ~is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~l 373 (591)
.+.+.+.++|++|+++|++++|+|..+......+++..
T Consensus 95 ~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~ 132 (220)
T TIGR01691 95 HLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHS 132 (220)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhc
Confidence 35667899999999999999999999887777776654
No 317
>PF10038 DUF2274: Protein of unknown function (DUF2274); InterPro: IPR018733 Members of this family of hypothetical bacterial proteins have no known function.
Probab=22.10 E-value=36 Score=27.53 Aligned_cols=23 Identities=30% Similarity=0.505 Sum_probs=17.6
Q ss_pred ccccccccchhhhhhhhhhhccc
Q 007731 78 EESVVRSSRKVFAEQRGYRKARR 100 (591)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~ 100 (591)
..-.++=..+|++.-|||+|.||
T Consensus 47 ~~Li~~MLerFmatDRgF~kaRr 69 (69)
T PF10038_consen 47 AKLIPPMLERFMATDRGFAKARR 69 (69)
T ss_pred HHHHHHHHHHHHHhcHHHHHhcC
Confidence 33344445899999999999987
No 318
>PRK13696 hypothetical protein; Provisional
Probab=21.37 E-value=3.3e+02 Score=21.56 Aligned_cols=37 Identities=30% Similarity=0.422 Sum_probs=29.8
Q ss_pred HHHhCCCHHHHHHHHH------HHhhhhhcCCCCCCCHHHHHHHHH
Q 007731 230 AEERGHSLLDEIRILM------VHGLLHLLGFDHEISEEAEAEMEK 269 (591)
Q Consensus 230 a~~~~~~~~~~~~~l~------vHG~LHLlGyDh~~~~~~~~~M~~ 269 (591)
+..-|.||.+=+..|+ .|-++.+.|-= +++|+++|..
T Consensus 18 ~kk~~~SFSevi~~L~~~~~~~~~~l~~~~Gil---~dee~~e~~~ 60 (62)
T PRK13696 18 EIKGDKSFSEVIRELIEKKKGNLDKLMKAFGIL---SEEEAEELKK 60 (62)
T ss_pred HHhCCCCHHHHHHHHHHHhhccHHHHHHHHCCC---CHHHHHHHHh
Confidence 6778899999999999 78899999964 3667777764
No 319
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=21.35 E-value=1.6e+02 Score=29.93 Aligned_cols=53 Identities=15% Similarity=0.140 Sum_probs=44.2
Q ss_pred CCCCHHHHHHHHHHHcCCCCCcEEEEecChhhHHHHHHCCceEEecCCcHHHH
Q 007731 515 PGTSKGSGVKMLLDHLGVSTKEIMAIGDGENDVEMLELASLGIALSNGSEKAK 567 (591)
Q Consensus 515 ~gvsKg~AL~~L~e~lgI~~eeviafGDs~NDi~Mlk~ag~gVAmgNA~~elk 567 (591)
..+.|-...+++.+++|-+...-++|||+.--....+.-+.++.--+..+.+.
T Consensus 211 ~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw~I~~h~Dl~ 263 (274)
T TIGR01658 211 IKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFVKIDLHPDSS 263 (274)
T ss_pred hhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeEEeecCCCHH
Confidence 46899999999999999888899999999998888888888776655555443
No 320
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=21.32 E-value=1.3e+02 Score=28.89 Aligned_cols=38 Identities=13% Similarity=0.231 Sum_probs=32.7
Q ss_pred CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 337 ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 337 is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
+.+...+.|+.++++ +.++++|+.+...+...++.+++
T Consensus 98 ~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l 135 (224)
T TIGR02254 98 LLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGL 135 (224)
T ss_pred eCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCc
Confidence 345678899999998 99999999988888888888887
No 321
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=20.95 E-value=58 Score=33.40 Aligned_cols=18 Identities=28% Similarity=0.361 Sum_probs=15.2
Q ss_pred CCceEEEEecCCCccCCC
Q 007731 317 PKFRYIFCDMDGTLLNSQ 334 (591)
Q Consensus 317 ~~iKlI~fDLDGTLld~~ 334 (591)
.+.|.+++|||+||+.+.
T Consensus 87 ~~kk~lVLDLDeTLvHss 104 (262)
T KOG1605|consen 87 VGRKTLVLDLDETLVHSS 104 (262)
T ss_pred CCCceEEEeCCCcccccc
Confidence 345899999999999875
No 322
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=20.89 E-value=85 Score=34.04 Aligned_cols=25 Identities=20% Similarity=0.010 Sum_probs=19.0
Q ss_pred CCCceEEEEecCCCccCCCCCCCHH
Q 007731 316 KPKFRYIFCDMDGTLLNSQSKISLT 340 (591)
Q Consensus 316 ~~~iKlI~fDLDGTLld~~~~is~~ 340 (591)
+.+|.++.||||+||..-.....+.
T Consensus 24 l~~i~~~GfdmDyTL~~Y~~~~~es 48 (424)
T KOG2469|consen 24 LENIGIVGFDMDYTLARYNLPEMES 48 (424)
T ss_pred hhcCcEEeeccccchhhhcccchHH
Confidence 3478999999999999866544443
No 323
>PF10263 SprT-like: SprT-like family; InterPro: IPR006640 This is a family of uncharacterised bacterial proteins which includes Escherichia coli SprT (P39902 from SWISSPROT). SprT is described as a regulator of bolA gene in stationary phase []. The majority of members contain the metallopeptidase zinc binding signature which has a HExxH motif, however there is no evidence for them being metallopeptidases.
Probab=20.85 E-value=5.3e+02 Score=23.46 Aligned_cols=66 Identities=14% Similarity=0.142 Sum_probs=36.8
Q ss_pred HHHHHHHHHhCCCCCCcEeeccCCCCC-CCCCccccc---cEEeeHHHHHHHHHHhCCCHHHHHHHHHHHhhhhhcC
Q 007731 182 FIRKLNKEWRDEDHATDVLSMSQHVPE-LKLPILMLG---DIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLG 254 (591)
Q Consensus 182 ~~~~lN~~~r~~d~~TdVlSF~~~~~~-~~~~~~~lG---di~i~~~~~~~~a~~~~~~~~~~~~~l~vHG~LHLlG 254 (591)
--..+|..|.+..=+.--+.|...... .+.-..--+ .|.|+....... ..+++...++|+|.|..=
T Consensus 4 ~f~~~n~~~F~~~L~~~~i~~~~~~~~~~G~~~~~~~~~~~I~ls~~~~~~~-------~~~~~~~tL~HEm~H~~~ 73 (157)
T PF10263_consen 4 LFDRFNEEYFGGKLPPIPITWSKRMKRTAGRCRYKRRSPCEIRLSPKLLDRN-------PEEELIDTLLHEMAHAAA 73 (157)
T ss_pred HHHHHHHHHhCCCCCCeEEEEECCCCCceEEEEECCCCceEEEECHHHHHhh-------HHHHHHHHHHHHHHHHHh
Confidence 346789999977666655677521110 000000012 799999998862 223555566666666554
No 324
>PRK09449 dUMP phosphatase; Provisional
Probab=20.54 E-value=1.4e+02 Score=29.01 Aligned_cols=38 Identities=13% Similarity=0.022 Sum_probs=31.4
Q ss_pred CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 337 ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 337 is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
+.+...+.|+.|+ +|++++++|+.+...+...++.+|+
T Consensus 96 ~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l 133 (224)
T PRK09449 96 PLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGL 133 (224)
T ss_pred cCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCCh
Confidence 3456788899998 6899999999888878888888876
No 325
>COG2115 XylA Xylose isomerase [Carbohydrate transport and metabolism]
Probab=20.50 E-value=1.4e+02 Score=31.55 Aligned_cols=56 Identities=25% Similarity=0.305 Sum_probs=39.2
Q ss_pred HHHhCCCHHHHHHHHHHHhhhh---------hcCCCCCCCHHHHHHHHHHHHHHHHhcCCcccCc
Q 007731 230 AEERGHSLLDEIRILMVHGLLH---------LLGFDHEISEEAEAEMEKNEEFLLQSLGWKGKGL 285 (591)
Q Consensus 230 a~~~~~~~~~~~~~l~vHG~LH---------LlGyDh~~~~~~~~~M~~~e~~il~~l~~~~~gl 285 (591)
|--.||+|++|++.--+||++- ++|||-..=+....+|--.=-+||+.=|+...|+
T Consensus 273 A~LaGHsFeHEl~~A~~lgifGSiDaNrgd~~lGWDTDqFP~~v~e~tLamyeiL~~GGf~~GG~ 337 (438)
T COG2115 273 ATLAGHSFEHELATARALGIFGSIDANRGDYQLGWDTDQFPNNVEENTLAMYEILKAGGFTTGGL 337 (438)
T ss_pred eecccccHHHHHHHHHHhccccccccCCCCcccCCcccccccchHHHHHHHHHHHHcCCcCCCCc
Confidence 4456899999999999999994 7899964334444555555557777655554444
No 326
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=20.37 E-value=1.4e+02 Score=27.72 Aligned_cols=37 Identities=16% Similarity=0.274 Sum_probs=29.1
Q ss_pred CCHHHHHHHHHHHhcCCeEEEEcCCChhHHHHHHHhcCC
Q 007731 337 ISLTTAKALKEALSRGLKVVVATGKTRPAVISALKKVDL 375 (591)
Q Consensus 337 is~~~~eaL~~L~~~Gi~vviaTGRs~~~~~~~l~~lgl 375 (591)
+.+...+.|+.|+++|++++++|+... ....++.+++
T Consensus 88 ~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l 124 (185)
T TIGR01990 88 VLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGL 124 (185)
T ss_pred cCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCc
Confidence 456779999999999999999998643 3456777776
No 327
>PRK04860 hypothetical protein; Provisional
Probab=20.11 E-value=4e+02 Score=25.13 Aligned_cols=79 Identities=15% Similarity=0.051 Sum_probs=42.5
Q ss_pred HHHhCCCCCCcEeeccCCCCCCCCCccccccEEeeHHHHHHH-HHHhCCCHHHHHHHHHHHhhhhhcCCCCCCCHHHHHH
Q 007731 188 KEWRDEDHATDVLSMSQHVPELKLPILMLGDIVISVETAARQ-AEERGHSLLDEIRILMVHGLLHLLGFDHEISEEAEAE 266 (591)
Q Consensus 188 ~~~r~~d~~TdVlSF~~~~~~~~~~~~~lGdi~i~~~~~~~~-a~~~~~~~~~~~~~l~vHG~LHLlGyDh~~~~~~~~~ 266 (591)
.+|.+++-+.=-++|-...-..+....-.++|-+.+-..+.. ....-..+.+|++|+.+|=... -||-|. .|-...
T Consensus 17 ~~~f~~~f~~p~~~f~~R~rtaG~~~l~~~~I~~Np~ll~~~~~~~l~~~v~HEl~H~~~~~~~g-~~~~Hg--~ewk~l 93 (160)
T PRK04860 17 NLYFKRTFPEPKVSYTQRGTSAGTAWLQSNEIRLNPVLLLENQQAFIDEVVPHELAHLLVYQLFG-RVAPHG--KEWQWM 93 (160)
T ss_pred HHHhCCCCCCCEEEEeecchhhcchhHhcCCeeeCHHHHhhCcHHHHHhHHHHHHHHHHHHHHcC-CCCCCC--HHHHHH
Confidence 355566555544566432111111112247788886665543 3344445688888888885433 588992 444445
Q ss_pred HHH
Q 007731 267 MEK 269 (591)
Q Consensus 267 M~~ 269 (591)
|++
T Consensus 94 m~~ 96 (160)
T PRK04860 94 MES 96 (160)
T ss_pred HHH
Confidence 544
Done!