Query 007734
Match_columns 591
No_of_seqs 240 out of 1746
Neff 6.9
Searched_HMMs 46136
Date Thu Mar 28 14:37:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007734.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007734hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02222 phosphoinositide phos 100.0 2E-165 4E-170 1350.8 52.6 580 1-591 1-581 (581)
2 PLN02230 phosphoinositide phos 100.0 3E-165 7E-170 1350.1 51.0 584 3-591 7-598 (598)
3 PLN02228 Phosphoinositide phos 100.0 7E-161 2E-165 1311.2 51.2 559 3-591 2-561 (567)
4 KOG0169 Phosphoinositide-speci 100.0 2E-160 5E-165 1306.0 39.6 558 1-591 182-744 (746)
5 PLN02952 phosphoinositide phos 100.0 7E-159 2E-163 1302.3 48.6 580 1-591 14-599 (599)
6 PLN02223 phosphoinositide phos 100.0 3E-151 6E-156 1218.7 46.0 523 10-591 1-537 (537)
7 KOG1265 Phospholipase C [Lipid 100.0 1E-141 3E-146 1152.3 32.7 552 19-590 215-822 (1189)
8 KOG1264 Phospholipase C [Lipid 100.0 4E-131 1E-135 1060.6 31.5 536 38-590 236-1188(1267)
9 cd08629 PI-PLCc_delta1 Catalyt 100.0 6E-110 1E-114 826.7 20.3 257 108-430 1-258 (258)
10 cd08633 PI-PLCc_eta2 Catalytic 100.0 6E-109 1E-113 816.4 20.4 252 108-430 1-254 (254)
11 cd08630 PI-PLCc_delta3 Catalyt 100.0 1E-108 2E-113 820.2 20.2 256 108-430 1-258 (258)
12 cd08624 PI-PLCc_beta2 Catalyti 100.0 2E-108 4E-113 818.7 21.5 254 108-430 1-261 (261)
13 cd08632 PI-PLCc_eta1 Catalytic 100.0 1E-108 3E-113 812.4 19.3 251 108-430 1-253 (253)
14 cd08595 PI-PLCc_zeta Catalytic 100.0 2E-108 5E-113 816.4 20.5 255 108-430 1-257 (257)
15 cd08631 PI-PLCc_delta4 Catalyt 100.0 2E-108 5E-113 816.7 20.1 256 108-430 1-258 (258)
16 cd08596 PI-PLCc_epsilon Cataly 100.0 6E-108 1E-112 812.1 19.0 248 108-430 1-254 (254)
17 cd08626 PI-PLCc_beta4 Catalyti 100.0 1E-107 3E-112 810.9 19.7 251 108-430 1-257 (257)
18 cd08623 PI-PLCc_beta1 Catalyti 100.0 3E-107 6E-112 809.1 20.1 251 108-430 1-258 (258)
19 cd08591 PI-PLCc_beta Catalytic 100.0 5E-107 1E-111 806.4 20.4 251 108-430 1-257 (257)
20 cd08593 PI-PLCc_delta Catalyti 100.0 6E-107 1E-111 809.8 20.0 256 108-430 1-257 (257)
21 cd08625 PI-PLCc_beta3 Catalyti 100.0 1E-106 2E-111 809.6 21.1 251 108-430 1-258 (258)
22 cd08594 PI-PLCc_eta Catalytic 100.0 5E-106 1E-110 785.2 19.5 225 108-430 1-227 (227)
23 cd08628 PI-PLCc_gamma2 Catalyt 100.0 4E-106 8E-111 800.2 18.1 253 108-430 1-254 (254)
24 cd08597 PI-PLCc_PRIP_metazoa C 100.0 4E-104 9E-109 790.4 19.7 259 108-430 1-260 (260)
25 cd08558 PI-PLCc_eukaryota Cata 100.0 2E-103 5E-108 769.4 20.0 225 108-430 1-226 (226)
26 cd08598 PI-PLC1c_yeast Catalyt 100.0 6E-103 1E-107 768.4 20.1 229 108-429 1-230 (231)
27 cd08627 PI-PLCc_gamma1 Catalyt 100.0 8E-103 2E-107 762.2 20.0 226 108-429 1-228 (229)
28 cd08592 PI-PLCc_gamma Catalyti 100.0 1E-101 2E-106 757.7 19.8 227 108-430 1-229 (229)
29 cd08599 PI-PLCc_plant Catalyti 100.0 9E-101 2E-105 752.9 20.2 226 108-430 1-228 (228)
30 cd00137 PI-PLCc Catalytic doma 100.0 2.9E-63 6.2E-68 508.6 17.5 251 108-430 1-274 (274)
31 smart00149 PLCYc Phospholipase 100.0 2.2E-45 4.8E-50 325.1 6.7 115 327-442 1-115 (115)
32 PF00387 PI-PLC-Y: Phosphatidy 100.0 8.2E-46 1.8E-50 330.3 1.2 118 325-443 1-118 (118)
33 smart00148 PLCXc Phospholipase 100.0 2.1E-40 4.4E-45 305.3 12.9 134 109-243 1-135 (135)
34 PF00388 PI-PLC-X: Phosphatidy 100.0 3.7E-37 8.1E-42 287.7 12.7 143 111-254 1-146 (146)
35 cd08589 PI-PLCc_SaPLC1_like Ca 99.9 9.3E-22 2E-26 203.1 12.3 146 109-254 3-209 (324)
36 cd00275 C2_PLC_like C2 domain 99.8 5.7E-19 1.2E-23 160.2 15.4 125 462-591 2-128 (128)
37 cd08590 PI-PLCc_Rv2075c_like C 99.8 2.1E-18 4.6E-23 176.2 12.3 143 108-252 3-168 (267)
38 cd08395 C2C_Munc13 C2 domain t 99.7 2.2E-17 4.7E-22 149.2 12.7 104 463-573 1-112 (120)
39 cd08682 C2_Rab11-FIP_classI C2 99.7 5.2E-16 1.1E-20 141.2 12.8 115 464-589 1-126 (126)
40 cd04036 C2_cPLA2 C2 domain pre 99.7 6.5E-16 1.4E-20 139.0 13.1 113 464-590 2-117 (119)
41 cd04042 C2A_MCTP_PRT C2 domain 99.7 2E-15 4.4E-20 136.2 14.4 116 463-590 1-119 (121)
42 cd08381 C2B_PI3K_class_II C2 d 99.6 1.2E-15 2.7E-20 138.3 12.2 103 462-571 13-121 (122)
43 cd04016 C2_Tollip C2 domain pr 99.6 2.7E-15 5.8E-20 135.9 14.3 115 462-590 2-121 (121)
44 cd08557 PI-PLCc_bacteria_like 99.6 5.3E-16 1.2E-20 158.8 9.6 144 110-254 4-158 (271)
45 cd04019 C2C_MCTP_PRT_plant C2 99.6 3.2E-15 7E-20 140.4 13.8 117 463-590 1-131 (150)
46 cd08677 C2A_Synaptotagmin-13 C 99.6 1.3E-15 2.9E-20 136.5 10.4 98 461-568 13-114 (118)
47 cd08377 C2C_MCTP_PRT C2 domain 99.6 6.6E-15 1.4E-19 132.0 14.6 117 463-591 2-119 (119)
48 cd08379 C2D_MCTP_PRT_plant C2 99.6 3.9E-15 8.5E-20 135.7 13.0 113 464-585 2-124 (126)
49 cd04022 C2A_MCTP_PRT_plant C2 99.6 4.1E-15 8.8E-20 135.5 12.9 117 463-590 1-125 (127)
50 cd04015 C2_plant_PLD C2 domain 99.6 8.4E-15 1.8E-19 138.8 14.8 125 461-591 6-158 (158)
51 cd04029 C2A_SLP-4_5 C2 domain 99.6 4.5E-15 9.8E-20 135.1 11.8 107 461-572 14-125 (125)
52 cd08406 C2B_Synaptotagmin-12 C 99.6 2.1E-15 4.5E-20 139.4 9.3 112 461-578 14-128 (136)
53 cd04010 C2B_RasA3 C2 domain se 99.6 6.2E-15 1.3E-19 138.1 12.2 108 463-578 1-127 (148)
54 cd08393 C2A_SLP-1_2 C2 domain 99.6 6.2E-15 1.3E-19 134.2 11.7 104 462-571 15-124 (125)
55 cd04028 C2B_RIM1alpha C2 domai 99.6 1.2E-14 2.6E-19 135.7 13.4 108 462-575 29-140 (146)
56 cd08392 C2A_SLP-3 C2 domain fi 99.6 8.2E-15 1.8E-19 134.0 12.0 104 462-571 15-127 (128)
57 cd04033 C2_NEDD4_NEDD4L C2 dom 99.6 1.4E-14 3E-19 132.7 13.4 122 463-591 1-133 (133)
58 cd04041 C2A_fungal C2 domain f 99.6 7.8E-15 1.7E-19 130.6 9.6 102 463-572 2-107 (111)
59 cd08376 C2B_MCTP_PRT C2 domain 99.6 3.2E-14 7E-19 127.2 13.6 110 464-590 2-114 (116)
60 cd04039 C2_PSD C2 domain prese 99.6 1.3E-14 2.8E-19 128.8 10.8 97 463-566 2-99 (108)
61 cd08681 C2_fungal_Inn1p-like C 99.6 2.3E-14 4.9E-19 128.5 12.5 113 463-590 2-118 (118)
62 cd08692 C2B_Tac2-N C2 domain s 99.6 1.2E-14 2.6E-19 133.4 10.6 113 460-578 12-128 (135)
63 cd08378 C2B_MCTP_PRT_plant C2 99.6 3.3E-14 7.2E-19 128.7 13.1 110 464-590 2-119 (121)
64 cd08400 C2_Ras_p21A1 C2 domain 99.6 5.9E-14 1.3E-18 127.9 14.7 115 462-590 4-122 (126)
65 cd04031 C2A_RIM1alpha C2 domai 99.6 4E-14 8.7E-19 128.0 12.4 105 461-571 15-124 (125)
66 cd08678 C2_C21orf25-like C2 do 99.5 7.8E-14 1.7E-18 126.9 13.7 116 464-591 1-120 (126)
67 cd08375 C2_Intersectin C2 doma 99.5 6.1E-14 1.3E-18 129.6 13.1 114 461-590 14-135 (136)
68 cd08407 C2B_Synaptotagmin-13 C 99.5 1.5E-14 3.4E-19 133.8 9.1 114 461-578 14-130 (138)
69 cd08680 C2_Kibra C2 domain fou 99.5 3.2E-14 6.9E-19 129.4 10.7 96 462-563 14-112 (124)
70 cd04050 C2B_Synaptotagmin-like 99.5 4.5E-14 9.7E-19 124.4 11.3 96 464-573 2-102 (105)
71 cd04040 C2D_Tricalbin-like C2 99.5 7.1E-14 1.5E-18 124.7 12.3 111 464-586 1-114 (115)
72 cd04025 C2B_RasA1_RasA4 C2 dom 99.5 9.7E-14 2.1E-18 125.5 13.3 114 464-588 2-122 (123)
73 cd08404 C2B_Synaptotagmin-4 C2 99.5 1.7E-14 3.6E-19 133.0 8.4 113 461-579 14-129 (136)
74 cd08373 C2A_Ferlin C2 domain f 99.5 1E-13 2.2E-18 126.2 13.3 109 468-590 2-115 (127)
75 cd08385 C2A_Synaptotagmin-1-5- 99.5 5.7E-14 1.2E-18 127.1 11.5 103 461-571 15-122 (124)
76 cd08688 C2_KIAA0528-like C2 do 99.5 4.7E-14 1E-18 125.3 10.1 100 464-574 1-110 (110)
77 KOG1030 Predicted Ca2+-depende 99.5 2.8E-14 6E-19 133.3 8.7 92 462-565 6-97 (168)
78 cd08685 C2_RGS-like C2 domain 99.5 5.1E-14 1.1E-18 127.1 10.1 98 462-566 12-111 (119)
79 cd08382 C2_Smurf-like C2 domai 99.5 1.2E-13 2.6E-18 125.3 12.6 113 464-588 2-122 (123)
80 cd08387 C2A_Synaptotagmin-8 C2 99.5 1E-13 2.2E-18 125.6 11.9 104 461-572 15-123 (124)
81 cd04030 C2C_KIAA1228 C2 domain 99.5 1.1E-13 2.3E-18 125.7 11.9 105 461-571 15-126 (127)
82 cd08402 C2B_Synaptotagmin-1 C2 99.5 2.9E-14 6.2E-19 131.4 8.2 113 461-579 14-129 (136)
83 cd04024 C2A_Synaptotagmin-like 99.5 2E-13 4.4E-18 123.8 13.7 117 463-590 2-128 (128)
84 cd04018 C2C_Ferlin C2 domain t 99.5 9E-14 2E-18 130.6 11.1 107 463-574 1-126 (151)
85 cd08521 C2A_SLP C2 domain firs 99.5 1.4E-13 3.1E-18 124.1 11.9 105 461-571 13-123 (123)
86 cd08384 C2B_Rabphilin_Doc2 C2 99.5 4.2E-14 9.1E-19 129.7 8.5 113 461-579 12-127 (133)
87 cd08388 C2A_Synaptotagmin-4-11 99.5 1.3E-13 2.9E-18 126.0 11.5 96 461-564 15-114 (128)
88 cd04032 C2_Perforin C2 domain 99.5 1.6E-13 3.5E-18 125.3 11.8 93 461-565 27-120 (127)
89 cd08391 C2A_C2C_Synaptotagmin_ 99.5 3.4E-13 7.4E-18 121.0 13.8 117 463-590 2-121 (121)
90 cd08410 C2B_Synaptotagmin-17 C 99.5 4.6E-14 9.9E-19 130.2 8.3 112 462-579 14-129 (135)
91 cd04011 C2B_Ferlin C2 domain s 99.5 1.5E-13 3.3E-18 122.2 11.3 99 461-574 3-111 (111)
92 cd04043 C2_Munc13_fungal C2 do 99.5 3.9E-13 8.4E-18 121.9 14.1 113 463-590 2-120 (126)
93 cd08401 C2A_RasA2_RasA3 C2 dom 99.5 4.3E-13 9.2E-18 121.5 13.5 117 464-590 2-121 (121)
94 cd04027 C2B_Munc13 C2 domain s 99.5 4.6E-13 1E-17 122.1 13.6 114 463-588 2-127 (127)
95 cd04017 C2D_Ferlin C2 domain f 99.5 4.6E-13 1E-17 123.4 13.5 115 463-591 2-132 (135)
96 cd04051 C2_SRC2_like C2 domain 99.5 1.8E-13 3.9E-18 124.0 10.6 108 463-580 1-121 (125)
97 cd08403 C2B_Synaptotagmin-3-5- 99.5 8.2E-14 1.8E-18 128.0 8.3 113 461-579 13-128 (134)
98 cd04054 C2A_Rasal1_RasA4 C2 do 99.5 4.7E-13 1E-17 121.0 13.0 115 464-589 2-120 (121)
99 cd04009 C2B_Munc13-like C2 dom 99.5 2.3E-13 5E-18 125.1 11.0 96 462-563 16-117 (133)
100 cd08405 C2B_Synaptotagmin-7 C2 99.5 9.1E-14 2E-18 128.1 8.0 113 461-579 14-129 (136)
101 cd08386 C2A_Synaptotagmin-7 C2 99.5 4.3E-13 9.2E-18 121.5 12.0 103 461-571 15-123 (125)
102 cd04046 C2_Calpain C2 domain p 99.5 1.7E-12 3.7E-17 118.2 15.6 114 462-590 3-121 (126)
103 cd04014 C2_PKC_epsilon C2 doma 99.5 8.8E-13 1.9E-17 120.9 13.7 116 462-590 4-128 (132)
104 cd04048 C2A_Copine C2 domain f 99.5 3.8E-13 8.3E-18 121.2 10.7 103 468-576 6-117 (120)
105 cd08390 C2A_Synaptotagmin-15-1 99.5 5.1E-13 1.1E-17 120.5 11.4 104 461-572 13-122 (123)
106 cd08389 C2A_Synaptotagmin-14_1 99.5 4.9E-13 1.1E-17 121.5 11.3 102 461-571 15-122 (124)
107 PF09279 EF-hand_like: Phospho 99.4 7.4E-14 1.6E-18 117.9 5.2 76 26-103 1-77 (83)
108 cd04026 C2_PKC_alpha_gamma C2 99.4 7E-13 1.5E-17 121.2 11.6 108 462-575 13-123 (131)
109 cd08690 C2_Freud-1 C2 domain f 99.4 2.1E-12 4.6E-17 121.6 15.0 121 464-590 4-136 (155)
110 cd04020 C2B_SLP_1-2-3-4 C2 dom 99.4 6.8E-13 1.5E-17 126.3 11.7 97 461-563 26-125 (162)
111 cd00276 C2B_Synaptotagmin C2 d 99.4 2.1E-13 4.5E-18 124.6 7.9 112 462-579 14-128 (134)
112 cd08409 C2B_Synaptotagmin-15 C 99.4 4.8E-13 1E-17 123.7 10.1 98 461-565 14-113 (137)
113 cd04044 C2A_Tricalbin-like C2 99.4 1.4E-12 3.1E-17 117.5 12.9 119 462-591 2-123 (124)
114 cd04035 C2A_Rabphilin_Doc2 C2 99.4 1.1E-12 2.3E-17 118.7 10.8 98 461-565 14-114 (123)
115 cd08408 C2B_Synaptotagmin-14_1 99.4 8.7E-13 1.9E-17 122.2 10.1 113 461-579 14-131 (138)
116 cd08691 C2_NEDL1-like C2 domai 99.4 2.9E-12 6.3E-17 118.5 13.5 117 463-588 2-136 (137)
117 cd04037 C2E_Ferlin C2 domain f 99.4 1.4E-12 3E-17 118.6 10.9 91 464-563 2-92 (124)
118 cd04038 C2_ArfGAP C2 domain pr 99.4 2.1E-12 4.5E-17 120.7 10.7 91 462-565 2-92 (145)
119 cd08675 C2B_RasGAP C2 domain s 99.4 3.1E-12 6.7E-17 118.4 11.5 104 464-575 1-122 (137)
120 cd08686 C2_ABR C2 domain in th 99.4 3.3E-12 7.1E-17 114.5 10.3 92 464-568 1-102 (118)
121 cd04045 C2C_Tricalbin-like C2 99.4 5.5E-12 1.2E-16 114.0 11.1 102 463-575 2-105 (120)
122 cd08676 C2A_Munc13-like C2 dom 99.3 6.9E-12 1.5E-16 118.1 11.4 103 459-571 25-153 (153)
123 cd04013 C2_SynGAP_like C2 doma 99.3 1.4E-11 3.1E-16 114.9 13.2 114 461-590 10-138 (146)
124 cd04049 C2_putative_Elicitor-r 99.3 6.9E-12 1.5E-16 113.5 10.7 91 463-564 2-96 (124)
125 cd04021 C2_E3_ubiquitin_ligase 99.3 1.4E-11 3E-16 112.1 11.9 114 462-588 2-124 (125)
126 cd08394 C2A_Munc13 C2 domain f 99.3 9.4E-12 2E-16 112.9 10.6 94 462-572 2-100 (127)
127 PLN03008 Phospholipase D delta 99.3 1.3E-11 2.7E-16 140.2 13.7 99 487-591 75-177 (868)
128 KOG0696 Serine/threonine prote 99.3 1.6E-12 3.6E-17 135.6 5.8 96 462-563 180-276 (683)
129 cd08383 C2A_RasGAP C2 domain ( 99.3 3.4E-11 7.4E-16 107.4 13.3 113 464-590 2-117 (117)
130 cd04052 C2B_Tricalbin-like C2 99.3 2.6E-11 5.7E-16 107.9 10.8 97 484-590 8-108 (111)
131 PF00168 C2: C2 domain; Inter 99.3 1.7E-11 3.6E-16 101.9 8.4 85 464-556 1-85 (85)
132 cd04047 C2B_Copine C2 domain s 99.2 4E-11 8.7E-16 106.2 10.2 98 467-571 5-108 (110)
133 cd08555 PI-PLCc_GDPD_SF Cataly 99.2 5.6E-11 1.2E-15 114.8 10.9 98 122-224 2-109 (179)
134 KOG1028 Ca2+-dependent phospho 99.1 2.5E-10 5.4E-15 124.2 12.6 121 462-590 167-293 (421)
135 smart00239 C2 Protein kinase C 99.1 4.3E-10 9.2E-15 95.4 10.6 99 464-570 2-100 (101)
136 PLN03200 cellulose synthase-in 99.0 9.1E-10 2E-14 135.8 11.9 114 461-590 1979-2099(2102)
137 cd08374 C2F_Ferlin C2 domain s 99.0 1.6E-09 3.6E-14 99.4 10.1 97 464-566 2-125 (133)
138 KOG1011 Neurotransmitter relea 99.0 9.5E-10 2.1E-14 119.2 8.3 116 462-589 295-422 (1283)
139 cd00030 C2 C2 domain. The C2 d 98.9 8.6E-09 1.9E-13 86.7 10.2 90 464-563 1-90 (102)
140 PLN02270 phospholipase D alpha 98.9 9.5E-09 2.1E-13 117.1 12.8 125 461-591 7-148 (808)
141 cd08586 PI-PLCc_BcPLC_like Cat 98.9 5.2E-09 1.1E-13 108.1 9.2 137 112-253 7-148 (279)
142 KOG1028 Ca2+-dependent phospho 98.8 9.6E-09 2.1E-13 111.9 10.0 165 389-561 206-393 (421)
143 cd08588 PI-PLCc_At5g67130_like 98.8 1.3E-08 2.9E-13 104.5 9.9 139 110-251 7-153 (270)
144 COG5038 Ca2+-dependent lipid-b 98.8 1.3E-08 2.8E-13 117.9 9.6 104 462-575 1040-1146(1227)
145 KOG1328 Synaptic vesicle prote 98.5 6.7E-08 1.4E-12 106.6 2.5 95 462-562 947-1047(1103)
146 PLN02352 phospholipase D epsil 98.4 2E-06 4.4E-11 98.2 12.0 118 461-591 9-130 (758)
147 COG5038 Ca2+-dependent lipid-b 98.1 9.6E-06 2.1E-10 94.7 8.8 93 462-563 436-528 (1227)
148 cd08689 C2_fungal_Pkc1p C2 dom 98.1 1.1E-05 2.5E-10 70.6 7.2 87 464-563 1-87 (109)
149 KOG2059 Ras GTPase-activating 97.9 3.8E-05 8.3E-10 85.5 9.5 113 462-586 5-122 (800)
150 KOG1031 Predicted Ca2+-depende 97.7 0.00014 2.9E-09 79.2 9.2 120 462-591 3-138 (1169)
151 KOG1011 Neurotransmitter relea 97.7 0.00015 3.3E-09 79.8 9.2 104 462-572 1125-1236(1283)
152 KOG0905 Phosphoinositide 3-kin 97.6 4.9E-05 1.1E-09 88.4 4.6 96 462-563 1524-1622(1639)
153 cd08622 PI-PLCXDc_CG14945_like 97.6 0.00048 1E-08 71.3 11.4 135 112-251 6-158 (276)
154 KOG2059 Ras GTPase-activating 97.6 0.00018 3.9E-09 80.4 8.1 76 487-563 149-240 (800)
155 KOG1013 Synaptic vesicle prote 97.5 0.00013 2.8E-09 75.3 6.1 104 463-578 234-339 (362)
156 cd08587 PI-PLCXDc_like Catalyt 97.5 0.00078 1.7E-08 70.1 11.6 136 112-251 6-170 (288)
157 cd08683 C2_C2cd3 C2 domain fou 97.1 0.0012 2.7E-08 59.8 6.6 81 489-570 33-142 (143)
158 KOG1328 Synaptic vesicle prote 97.1 0.00019 4.2E-09 80.1 1.4 81 508-588 180-298 (1103)
159 KOG1326 Membrane-associated pr 97.0 0.00052 1.1E-08 79.3 3.9 94 459-561 610-703 (1105)
160 cd08398 C2_PI3K_class_I_alpha 96.9 0.013 2.9E-07 55.6 12.1 101 462-572 8-120 (158)
161 cd04012 C2A_PI3K_class_II C2 d 96.9 0.0079 1.7E-07 57.8 10.5 114 461-580 7-142 (171)
162 cd08693 C2_PI3K_class_I_beta_d 96.9 0.014 3E-07 56.3 12.0 103 462-572 8-134 (173)
163 cd08616 PI-PLCXD1c Catalytic d 96.9 0.01 2.3E-07 61.9 12.0 136 112-253 7-175 (290)
164 cd08380 C2_PI3K_like C2 domain 96.8 0.016 3.4E-07 54.7 11.6 103 463-572 9-121 (156)
165 KOG1013 Synaptic vesicle prote 96.8 0.00031 6.8E-09 72.5 -0.1 98 462-565 93-193 (362)
166 PLN02964 phosphatidylserine de 96.8 0.003 6.6E-08 72.1 7.6 87 460-563 52-138 (644)
167 cd08556 GDPD Glycerophosphodie 96.5 0.013 2.9E-07 56.0 8.9 63 133-209 10-72 (189)
168 cd08562 GDPD_EcUgpQ_like Glyce 96.4 0.0099 2.1E-07 59.3 7.8 40 134-174 11-50 (229)
169 cd08582 GDPD_like_2 Glyceropho 96.4 0.017 3.7E-07 58.0 9.3 40 134-174 11-50 (233)
170 cd08397 C2_PI3K_class_III C2 d 96.3 0.02 4.4E-07 54.4 8.6 85 488-572 29-121 (159)
171 cd08579 GDPD_memb_like Glycero 96.1 0.016 3.5E-07 57.6 7.3 40 134-174 11-50 (220)
172 PF03009 GDPD: Glycerophosphor 96.1 0.0086 1.9E-07 59.7 5.3 40 134-174 8-47 (256)
173 cd08684 C2A_Tac2-N C2 domain f 96.0 0.012 2.7E-07 49.9 5.2 59 504-564 34-94 (103)
174 cd08563 GDPD_TtGDE_like Glycer 95.8 0.026 5.7E-07 56.5 7.6 40 134-174 13-52 (230)
175 cd08399 C2_PI3K_class_I_gamma 95.8 0.066 1.4E-06 51.8 9.8 102 463-571 11-135 (178)
176 cd08577 PI-PLCc_GDPD_SF_unchar 95.7 0.031 6.8E-07 56.3 7.6 97 122-229 4-109 (228)
177 cd08620 PI-PLCXDc_like_1 Catal 95.6 0.1 2.2E-06 54.3 11.1 139 112-253 6-162 (281)
178 cd08619 PI-PLCXDc_plant Cataly 95.5 0.072 1.6E-06 55.1 9.3 137 109-254 23-166 (285)
179 cd08567 GDPD_SpGDE_like Glycer 95.4 0.056 1.2E-06 55.1 8.4 40 135-175 14-53 (263)
180 PF00792 PI3K_C2: Phosphoinosi 95.3 0.05 1.1E-06 50.5 6.8 82 491-572 4-99 (142)
181 cd08565 GDPD_pAtGDE_like Glyce 95.0 0.12 2.5E-06 52.2 9.3 39 135-174 12-50 (235)
182 cd08566 GDPD_AtGDE_like Glycer 95.0 0.094 2E-06 53.1 8.3 65 135-208 14-110 (240)
183 cd08573 GDPD_GDE1 Glycerophosp 94.7 0.13 2.8E-06 52.7 8.7 40 134-174 11-50 (258)
184 cd08564 GDPD_GsGDE_like Glycer 94.6 0.13 2.9E-06 52.7 8.4 39 134-173 18-56 (265)
185 cd08568 GDPD_TmGDE_like Glycer 94.5 0.16 3.4E-06 50.8 8.6 78 133-220 11-113 (226)
186 KOG2060 Rab3 effector RIM1 and 94.3 0.034 7.3E-07 58.7 3.4 107 461-573 268-379 (405)
187 cd05029 S-100A6 S-100A6: S-100 94.3 0.18 4E-06 43.0 7.2 62 26-94 11-78 (88)
188 cd08584 PI-PLCc_GDPD_SF_unchar 93.8 0.26 5.7E-06 48.2 8.1 47 138-188 8-54 (192)
189 cd08575 GDPD_GDE4_like Glycero 93.6 0.078 1.7E-06 54.5 4.4 40 135-175 14-53 (264)
190 cd08561 GDPD_cytoplasmic_ScUgp 93.3 0.091 2E-06 53.3 4.2 41 134-175 11-51 (249)
191 KOG1327 Copine [Signal transdu 92.9 0.21 4.5E-06 55.6 6.5 84 506-589 42-130 (529)
192 KOG3837 Uncharacterized conser 92.8 0.13 2.9E-06 54.9 4.6 121 462-590 367-502 (523)
193 cd08574 GDPD_GDE_2_3_6 Glycero 92.6 0.13 2.9E-06 52.4 4.2 41 134-175 14-54 (252)
194 cd08601 GDPD_SaGlpQ_like Glyce 92.2 0.17 3.6E-06 51.6 4.4 41 134-175 13-53 (256)
195 PRK11143 glpQ glycerophosphodi 91.9 0.21 4.5E-06 53.7 4.9 42 133-175 38-79 (355)
196 cd08580 GDPD_Rv2277c_like Glyc 91.8 0.23 5E-06 51.1 5.0 42 133-175 12-53 (263)
197 cd08581 GDPD_like_1 Glyceropho 91.7 0.2 4.3E-06 50.4 4.3 40 135-175 12-51 (229)
198 cd08612 GDPD_GDE4 Glycerophosp 91.6 0.21 4.6E-06 52.2 4.6 40 135-175 40-79 (300)
199 cd08600 GDPD_EcGlpQ_like Glyce 91.6 0.21 4.6E-06 52.8 4.6 42 133-175 12-53 (318)
200 cd08695 C2_Dock-B C2 domains f 91.6 0.74 1.6E-05 45.0 7.9 56 504-559 52-111 (189)
201 cd08694 C2_Dock-A C2 domains f 91.4 2.7 5.9E-05 41.3 11.6 68 505-572 53-131 (196)
202 cd08607 GDPD_GDE5 Glycerophosp 91.3 0.25 5.4E-06 51.3 4.7 49 127-176 12-60 (290)
203 cd08571 GDPD_SHV3_plant Glycer 90.7 0.25 5.5E-06 51.9 4.1 41 134-175 13-53 (302)
204 cd08605 GDPD_GDE5_like_1_plant 90.7 0.27 5.9E-06 50.8 4.2 38 136-174 25-62 (282)
205 cd08559 GDPD_periplasmic_GlpQ_ 90.6 0.26 5.7E-06 51.5 4.0 41 134-175 13-53 (296)
206 cd08609 GDPD_GDE3 Glycerophosp 90.3 0.31 6.7E-06 51.5 4.3 49 123-175 31-79 (315)
207 cd08606 GDPD_YPL110cp_fungi Gl 90.1 0.3 6.5E-06 50.6 3.9 39 136-175 24-62 (286)
208 cd08570 GDPD_YPL206cp_fungi Gl 89.7 0.48 1E-05 47.6 4.9 41 134-175 11-51 (234)
209 PTZ00268 glycosylphosphatidyli 89.5 3.9 8.6E-05 44.1 11.8 107 142-255 90-207 (380)
210 cd08602 GDPD_ScGlpQ1_like Glyc 89.5 0.38 8.2E-06 50.7 4.2 43 133-176 12-54 (309)
211 cd05024 S-100A10 S-100A10: A s 89.4 1.7 3.6E-05 37.5 7.2 63 26-94 9-75 (91)
212 PRK09454 ugpQ cytoplasmic glyc 89.2 0.37 8E-06 49.0 3.8 41 134-175 20-60 (249)
213 smart00142 PI3K_C2 Phosphoinos 89.1 2.1 4.5E-05 37.3 7.9 56 489-544 32-91 (100)
214 cd05030 calgranulins Calgranul 88.5 1.4 3E-05 37.5 6.2 62 26-94 9-78 (88)
215 cd08583 PI-PLCc_GDPD_SF_unchar 88.2 0.58 1.3E-05 47.1 4.4 39 135-174 14-52 (237)
216 PF14429 DOCK-C2: C2 domain in 88.1 1.6 3.4E-05 42.3 7.2 67 506-572 60-135 (184)
217 cd08604 GDPD_SHV3_repeat_2 Gly 87.9 0.61 1.3E-05 48.9 4.4 42 133-175 12-53 (300)
218 KOG1326 Membrane-associated pr 87.7 0.37 7.9E-06 56.7 2.7 85 484-573 222-317 (1105)
219 PF13833 EF-hand_8: EF-hand do 87.5 1.2 2.5E-05 33.7 4.7 50 38-94 3-52 (54)
220 cd05023 S-100A11 S-100A11: S-1 87.5 1.8 3.9E-05 37.0 6.3 63 26-94 10-79 (89)
221 cd05026 S-100Z S-100Z: S-100Z 87.1 2.8 6.2E-05 35.9 7.4 63 26-94 11-80 (93)
222 PF15627 CEP76-C2: CEP76 C2 do 86.8 10 0.00022 36.0 11.4 126 459-591 6-150 (156)
223 cd08572 GDPD_GDE5_like Glycero 86.7 0.79 1.7E-05 47.9 4.5 42 133-175 19-60 (293)
224 cd08679 C2_DOCK180_related C2 86.7 1.8 3.9E-05 41.8 6.6 67 509-575 56-134 (178)
225 PF10358 NT-C2: N-terminal C2 86.7 14 0.00031 33.7 12.4 115 461-590 6-134 (143)
226 cd08610 GDPD_GDE6 Glycerophosp 86.4 0.83 1.8E-05 48.3 4.4 43 133-176 34-76 (316)
227 cd05022 S-100A13 S-100A13: S-1 86.3 2.4 5.3E-05 36.3 6.4 63 26-95 9-75 (89)
228 KOG1327 Copine [Signal transdu 84.8 1.3 2.9E-05 49.4 5.1 82 483-564 151-236 (529)
229 cd05025 S-100A1 S-100A1: S-100 83.4 4 8.7E-05 34.6 6.6 64 25-94 9-79 (92)
230 cd08578 GDPD_NUC-2_fungi Putat 83.3 1.5 3.2E-05 46.1 4.6 52 118-176 3-54 (300)
231 COG0584 UgpQ Glycerophosphoryl 83.1 1.3 2.7E-05 45.0 3.9 37 135-172 19-55 (257)
232 cd08560 GDPD_EcGlpQ_like_1 Gly 82.4 1.5 3.2E-05 47.3 4.2 40 134-174 29-69 (356)
233 cd00051 EFh EF-hand, calcium b 82.4 6 0.00013 29.2 6.6 59 27-93 2-62 (63)
234 smart00027 EH Eps15 homology d 82.2 5.7 0.00012 34.0 7.1 61 24-94 9-71 (96)
235 cd08585 GDPD_like_3 Glyceropho 82.0 1.4 2.9E-05 44.6 3.6 39 135-175 20-58 (237)
236 cd08613 GDPD_GDE4_like_1 Glyce 81.8 1.5 3.3E-05 46.2 3.9 39 136-175 60-98 (309)
237 cd08608 GDPD_GDE2 Glycerophosp 81.0 1.8 3.9E-05 46.5 4.3 41 134-175 14-54 (351)
238 KOG2258 Glycerophosphoryl dies 80.6 2.2 4.8E-05 45.7 4.8 40 135-175 82-121 (341)
239 PF05386 TEP1_N: TEP1 N-termin 79.8 0.41 9E-06 31.9 -0.6 14 194-207 8-21 (30)
240 PF01023 S_100: S-100/ICaBP ty 79.5 2.3 5E-05 31.5 3.2 27 26-52 7-37 (44)
241 PTZ00183 centrin; Provisional 77.7 8.9 0.00019 35.1 7.4 65 23-95 88-154 (158)
242 PTZ00184 calmodulin; Provision 77.3 8.7 0.00019 34.6 7.1 65 23-95 82-148 (149)
243 PF13499 EF-hand_7: EF-hand do 77.1 7 0.00015 30.5 5.6 63 27-93 2-66 (66)
244 cd00052 EH Eps15 homology doma 74.9 13 0.00029 28.7 6.7 57 28-94 2-60 (67)
245 cd05027 S-100B S-100B: S-100B 74.6 14 0.0003 31.4 7.1 63 26-94 9-78 (88)
246 cd00213 S-100 S-100: S-100 dom 70.9 19 0.0004 30.0 7.0 64 25-94 8-78 (88)
247 cd08603 GDPD_SHV3_repeat_1 Gly 70.3 5 0.00011 42.2 4.0 40 135-175 14-55 (299)
248 cd08697 C2_Dock-D C2 domains f 69.3 19 0.00041 35.2 7.5 68 505-572 56-138 (185)
249 KOG0904 Phosphatidylinositol 3 67.9 24 0.00052 41.8 9.0 101 462-571 343-469 (1076)
250 cd05031 S-100A10_like S-100A10 67.2 22 0.00047 30.3 6.8 64 25-94 8-78 (94)
251 PF09069 EF-hand_3: EF-hand; 66.2 12 0.00026 32.2 4.8 62 27-96 5-76 (90)
252 cd08696 C2_Dock-C C2 domains f 65.0 21 0.00045 34.7 6.9 56 505-560 54-117 (179)
253 PF05517 p25-alpha: p25-alpha 65.0 13 0.00027 35.2 5.3 62 27-94 1-68 (154)
254 PF12416 DUF3668: Cep120 prote 63.9 66 0.0014 34.5 10.9 99 464-576 2-116 (340)
255 cd08621 PI-PLCXDc_like_2 Catal 63.7 19 0.00041 37.9 6.8 92 112-204 6-113 (300)
256 KOG4306 Glycosylphosphatidylin 60.4 33 0.00072 36.0 7.7 83 143-230 73-162 (306)
257 KOG1329 Phospholipase D1 [Lipi 55.5 14 0.0003 43.8 4.4 97 489-590 138-239 (887)
258 PRK07259 dihydroorotate dehydr 52.1 41 0.00088 35.1 7.0 79 130-221 95-180 (301)
259 KOG0906 Phosphatidylinositol 3 48.7 17 0.00037 41.6 3.5 85 488-572 46-138 (843)
260 PTZ00183 centrin; Provisional 48.6 68 0.0015 29.1 7.3 62 25-94 17-80 (158)
261 PF00036 EF-hand_1: EF hand; 48.0 22 0.00047 23.7 2.7 26 26-51 1-28 (29)
262 PF13405 EF-hand_6: EF-hand do 45.5 22 0.00049 23.6 2.5 26 26-51 1-28 (31)
263 PTZ00184 calmodulin; Provision 45.1 86 0.0019 27.9 7.2 63 25-95 11-75 (149)
264 PF11422 IBP39: Initiator bind 43.8 35 0.00077 32.9 4.4 99 24-127 18-138 (181)
265 PF11618 DUF3250: Protein of u 42.4 78 0.0017 28.0 6.2 79 507-589 13-103 (107)
266 cd02810 DHOD_DHPD_FMN Dihydroo 40.5 1.1E+02 0.0024 31.5 8.0 90 129-229 101-195 (289)
267 smart00054 EFh EF-hand, calciu 39.9 39 0.00084 20.2 2.9 26 26-51 1-28 (29)
268 COG5126 FRQ1 Ca2+-binding prot 37.9 1.2E+02 0.0025 29.0 7.0 60 26-94 21-82 (160)
269 COG5126 FRQ1 Ca2+-binding prot 37.5 91 0.002 29.8 6.2 65 22-94 89-155 (160)
270 PF15625 CC2D2AN-C2: CC2D2A N- 34.2 1.3E+02 0.0028 28.7 6.8 67 490-563 38-107 (168)
271 KOG0027 Calmodulin and related 33.9 1.4E+02 0.003 27.6 6.9 64 24-95 84-149 (151)
272 PF14788 EF-hand_10: EF hand; 33.7 78 0.0017 24.3 4.0 46 40-93 2-47 (51)
273 PLN02591 tryptophan synthase 33.2 31 0.00068 35.3 2.5 94 135-231 11-114 (250)
274 KOG1452 Predicted Rho GTPase-a 32.6 1.7E+02 0.0038 30.9 7.7 77 461-547 50-126 (442)
275 PTZ00466 actin-like protein; P 32.3 54 0.0012 35.6 4.3 48 178-225 83-135 (380)
276 PF08726 EFhand_Ca_insen: Ca2+ 31.7 29 0.00063 28.3 1.6 33 21-53 2-35 (69)
277 PTZ00452 actin; Provisional 30.7 58 0.0013 35.2 4.2 49 177-225 75-129 (375)
278 PRK05395 3-dehydroquinate dehy 30.4 50 0.0011 31.0 3.1 65 133-208 22-102 (146)
279 PRK09071 hypothetical protein; 29.5 40 0.00087 35.9 2.6 55 134-188 53-132 (323)
280 PTZ00281 actin; Provisional 29.4 57 0.0012 35.2 3.8 49 177-225 76-130 (376)
281 KOG0027 Calmodulin and related 29.1 2E+02 0.0043 26.5 7.0 65 25-97 8-74 (151)
282 PF11478 Tachystatin_B: Antimi 28.7 20 0.00042 25.2 0.1 16 142-160 1-16 (42)
283 PF00022 Actin: Actin; InterP 27.7 68 0.0015 34.4 4.1 46 180-225 72-123 (393)
284 PF12738 PTCB-BRCT: twin BRCT 27.5 44 0.00096 25.9 2.0 29 122-154 32-60 (63)
285 PF14186 Aida_C2: Cytoskeletal 27.3 2.6E+02 0.0057 26.3 7.3 120 462-590 13-147 (147)
286 COG1590 Uncharacterized conser 26.4 24 0.00052 34.9 0.3 54 136-200 44-101 (208)
287 cd08687 C2_PKN-like C2 domain 25.7 2.2E+02 0.0048 24.8 5.9 46 516-566 31-76 (98)
288 cd00252 SPARC_EC SPARC_EC; ext 25.3 2.8E+02 0.006 24.9 6.9 60 23-94 46-107 (116)
289 cd00466 DHQase_II Dehydroquina 24.7 65 0.0014 30.0 2.7 66 133-209 20-101 (140)
290 smart00268 ACTIN Actin. ACTIN 24.2 81 0.0018 33.7 3.9 46 180-225 73-124 (373)
291 PF00977 His_biosynth: Histidi 23.9 1.2E+02 0.0027 30.2 4.9 39 150-192 123-161 (229)
292 PTZ00004 actin-2; Provisional 23.5 97 0.0021 33.4 4.3 46 181-226 80-131 (378)
293 COG0323 MutL DNA mismatch repa 22.3 94 0.002 36.3 4.1 53 140-193 30-96 (638)
294 CHL00200 trpA tryptophan synth 21.8 72 0.0016 32.9 2.7 99 126-231 19-127 (263)
295 cd04740 DHOD_1B_like Dihydroor 21.0 2.7E+02 0.0059 28.7 7.0 78 131-221 94-177 (296)
296 PF05673 DUF815: Protein of un 20.2 2E+02 0.0044 29.5 5.5 85 122-229 51-137 (249)
No 1
>PLN02222 phosphoinositide phospholipase C 2
Probab=100.00 E-value=1.7e-165 Score=1350.78 Aligned_cols=580 Identities=73% Similarity=1.247 Sum_probs=502.9
Q ss_pred CCCcceeeeeeeecccCccCCCCchHHHHHHHHhhCCCCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhc
Q 007734 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQ 80 (591)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~r~ei~~if~~~~~~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~ 80 (591)
|++++||||+||.|+|+......|+||..||.+|++++.|+.++|.+||+++|++..++.++|.+||++|+.. ..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~ei~~if~~~~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~-----~~ 75 (581)
T PLN02222 1 MSKQTYKVCFCFRRRFRYTASEAPREIKTIFEKYSENGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSL-----LH 75 (581)
T ss_pred CCccceeEEEEeccccccccCCCcHHHHHHHHHhcCCCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhh-----hh
Confidence 8999999999999999999999999999999999977899999999999999999888999999999998632 23
Q ss_pred cCCCCHHHHHHHhccCCCCCCCCCCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecC
Q 007734 81 RRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPN 160 (591)
Q Consensus 81 ~~~l~~~~F~~~l~s~~n~~~~~~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg 160 (591)
++.|+++||++||+|++|.++. +..|+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||
T Consensus 76 ~~~~~~~gF~~yL~s~~n~~~~-~~~v~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg 154 (581)
T PLN02222 76 RNGLHLDAFFKYLFGDNNPPLA-LHEVHHDMDAPISHYFIFTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPN 154 (581)
T ss_pred ccCcCHHHHHHHhcCCCCCCCc-cccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccC
Confidence 4679999999999999999985 367999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceEeeCCcccccchHHHHHHHHhhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCC
Q 007734 161 SKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFP 239 (591)
Q Consensus 161 ~~~~~piv~HG~tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~lP 239 (591)
+++++|+||||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+||.++. +....||
T Consensus 155 ~~~~~~~v~HG~tlt~~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~~~~~~g~~L~~~~~~~~~~~lp 234 (581)
T PLN02222 155 SDKDDIDVLHGMTLTTPVGLIKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEFP 234 (581)
T ss_pred CCCCCCeEeeCCcccCceeHHHHHHHHHHhcccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCCC
Confidence 887778999999999999999999999999999999999999999999999999999999999999999874 4467999
Q ss_pred ChhhccccEEEecCCCCchhhhhhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccc
Q 007734 240 SPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQ 319 (591)
Q Consensus 240 SP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (591)
||++||||||||+|++++.++.... .....+....++..++.+.++........++.+..+.+ .+++++...+..
T Consensus 235 sP~~Lk~kilik~K~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 309 (581)
T PLN02222 235 SPNSLKKRIIISTKPPKEYKEGKDD----EVVQKGKDLGDEEVWGREVPSFIQRNKSVDKNDSNGDD-DDDDDDGEDKSK 309 (581)
T ss_pred ChHHHCCCEEEEecCCccccccccc----cccccccccccccccccccccccccccccccccccccc-cccccccccccc
Confidence 9999999999999998765443210 00011111122233444444332221111110000000 011111222333
Q ss_pred cccchhhccceEeecccccCCcccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCc
Q 007734 320 HNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPL 399 (591)
Q Consensus 320 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~ 399 (591)
....++++.|++++.+++++++...++..|.+++++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+
T Consensus 310 ~~~~~~~~~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~L~RiYP~G~RvdSSNynP~ 389 (581)
T PLN02222 310 KNAPPQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSEEQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNYNPL 389 (581)
T ss_pred cccCHHhhhheeeecccccCccchhhhcCcccccccccCHHHHHHHHHhhhHHHHHHhhhhceeeCCCCCcCcCCCCCch
Confidence 44578899999999999888877777666777889999999999999999999999999999999999999999999999
Q ss_pred ccccccceeeeeccCCCCcceeeeeeeeeecCceeeeecCCcccCCCCCCCccCCCCCCCCceeEEEEEEeccccCcCCC
Q 007734 400 IGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFP 479 (591)
Q Consensus 400 ~~W~~G~QmVALN~QT~D~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visa~~L~~~~~ 479 (591)
.||++|||||||||||+|++||||+|||+.||+|||||||++||+....+..|+|....|++.+|+|+|++|++|+++.+
T Consensus 390 ~~W~~G~QmVALN~QT~d~~M~LN~G~F~~NG~cGYVLKP~~lr~~~~~~~~fdp~~~~~~~~~L~V~Visgq~~~l~~~ 469 (581)
T PLN02222 390 VGWSHGAQMVAFNMQGYGRSLWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKATLPVKTTLRVTIYMGEGWYFDFR 469 (581)
T ss_pred hHhcCCcEEeeccccCCChhhhhhcchhccCCCCceEECCHHhccCCccccccCCCCCCCccceEEEEEEEcccccCCCC
Confidence 99999999999999999999999999999999999999999999876544579999888888899999999999876655
Q ss_pred CCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEEC
Q 007734 480 HTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPV 559 (591)
Q Consensus 480 ~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL 559 (591)
+.+.+.++++||||+|+|.|.|.|..++||+++.+|+||+|||+|+|.+..||+|+|||.|+|+|..+.++|+||+++||
T Consensus 470 ~~~~~~~~~~dpyV~Vei~G~p~D~~~~rTk~v~nn~nP~W~e~f~F~i~~PeLAllRf~V~d~D~~~~ddfigq~~lPv 549 (581)
T PLN02222 470 HTHFDQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNWIPAWDEVFEFPLTVPELALLRLEVHEYDMSEKDDFGGQTCLPV 549 (581)
T ss_pred ccccCCCCCCCeeEEEEEeccCCCcceeeeEecCCCCCcccCCeeEEEEEcCceeEEEEEEEECCCCCCCcEEEEEEcch
Confidence 55566778899999999999999999999999999999999999999999999999999999999877899999999999
Q ss_pred CccCCcceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 560 SELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 560 ~sL~~GyR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
++|++|||||||+|..|+++.+|+|||||+|.
T Consensus 550 ~~Lr~GyR~V~L~~~~g~~l~~a~Lfv~~~~~ 581 (581)
T PLN02222 550 WELSQGIRAFPLHSRKGEKYKSVKLLVKVEFV 581 (581)
T ss_pred hhhhCccceEEccCCCcCCCCCeeEEEEEEeC
Confidence 99999999999999999999999999999984
No 2
>PLN02230 phosphoinositide phospholipase C 4
Probab=100.00 E-value=3.2e-165 Score=1350.11 Aligned_cols=584 Identities=58% Similarity=1.004 Sum_probs=499.0
Q ss_pred CcceeeeeeeecccCccCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCC-CCCHHHHHHHHHHHhhhhc-hhhh
Q 007734 3 KQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKED-KASKEDAQAIIDSLRELKH-LNIF 79 (591)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~r~ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~-~~~~~~~~~ii~~~~~~~~-~~~~ 79 (591)
|||||||+||.|+|+.....+|+||.+||.+|+++ ..||+++|.+||+++|++. ..+.+.|.+||++|++..+ ....
T Consensus 7 m~~~~~~~~~~~~~~~~~~~p~~ei~~lf~~~s~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 86 (598)
T PLN02230 7 MGSYKFCLIFTRKFRMTESGPVADVRDLFEKYADGDAHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKF 86 (598)
T ss_pred CccceEEEEecCccccccCCCcHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccc
Confidence 67999999999999999999999999999999876 9999999999999999654 4578999999999985432 2233
Q ss_pred ccCCCCHHHHHHHhccCC-CCCCCCCCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEee
Q 007734 80 QRRGLNLEAFFKYLFGDI-NPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIW 158 (591)
Q Consensus 80 ~~~~l~~~~F~~~l~s~~-n~~~~~~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~W 158 (591)
.++.|+++||++||+|.+ |.+. +..|+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||
T Consensus 87 ~~~~~~~~~F~~yL~s~~~~~~~--~~~v~qDM~~PLshYfI~sSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~w 164 (598)
T PLN02230 87 TRRNLTLDDFNYYLFSTDLNPPI--ADQVHQNMDAPLSHYFIFTGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDLW 164 (598)
T ss_pred cccccCHHHHHHHHcCcccCCcc--cccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEecc
Confidence 456799999999999854 4443 3579999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceEeeCCcccccchHHHHHHHHhhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCCC
Q 007734 159 PNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEF 238 (591)
Q Consensus 159 dg~~~~~piv~HG~tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~l 238 (591)
||++ ++|+|+||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+||.++.+....|
T Consensus 165 dg~~-~ep~v~HG~t~t~~i~f~~v~~~I~~~aF~~s~yPvIlslE~hcs~~~Q~~~a~~~~~~~Gd~L~~~~~~~~~~l 243 (598)
T PLN02230 165 PRGT-DDVCVKHGRTLTKEVKLGKCLDSIKANAFAISKYPVIITLEDHLTPKLQFKVAKMITQTFGDMLYYHDSEGCQEF 243 (598)
T ss_pred CCCC-CCcEEeeCCCCcCCcCHHHHHHHHHHhccCCCCCCeEEEeccCCCHHHHHHHHHHHHHHHhhhhccCCCcccCCC
Confidence 9876 579999999999999999999999999999999999999999999999999999999999999999876667899
Q ss_pred CChhhccccEEEecCCCCchhhhhhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCC-CCC-CCCCCC--CCcc
Q 007734 239 PSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKD-DFD-GGVDND--EEDS 314 (591)
Q Consensus 239 PSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~--~~~~ 314 (591)
|||++||||||||+|++++.++.+...+. +.......++++.|+.+.+.+.......+... ..+ .+..++ .+..
T Consensus 244 psP~~Lk~kilik~Kk~~~~~e~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 321 (598)
T PLN02230 244 PSPEELKEKILISTKPPKEYLEANDAKEK--DNGEKGKDSDEDVWGKEPEDLISTQSDLDKVTSSVNDLNQDDEERGSCE 321 (598)
T ss_pred CChHHHcCCEEEEecCCcccccccccccc--cccccccccchhhhccccccccccccccccccccccccccchhcccccc
Confidence 99999999999999998766554321110 00011112223334433322221111000000 000 000000 0001
Q ss_pred ccccccccchhhccceEeecccccCCcccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCC
Q 007734 315 DDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSS 394 (591)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SS 394 (591)
..++...++++|++|++|+.+++++++..+++..+.+++|+||||.++.++++.++.+|++||++||+||||+|+|+|||
T Consensus 322 ~~~~~~~~~~els~Li~y~~~~~~~~~~~~~~~~~~~v~~~SlsE~~~~~~~~~~~~~~v~~nk~~L~RIYPkG~RvdSS 401 (598)
T PLN02230 322 SDTSCQLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRRLSLSEQLLEKAVASYGADVIRFTQKNFLRIYPKGTRFNSS 401 (598)
T ss_pred ccccchhcCHHHhhheeeecCccCCCcchhhhcCccceeeccccHHHHHHHHHhhhHHHHHhhhhhceeeCCCCCcCCCC
Confidence 11223356899999999999999999988888778888999999999999999999999999999999999999999999
Q ss_pred CCCCcccccccceeeeeccCCCCcceeeeeeeeeecCceeeeecCCcccCCCCCCCccCCCCCCCCceeEEEEEEecccc
Q 007734 395 NYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGW 474 (591)
Q Consensus 395 N~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visa~~L 474 (591)
||||+.||++|||||||||||+|++||||+|||+.||+|||||||++||+..+.++.|+|....+++.+|+|+|++|++|
T Consensus 402 NynP~~~W~~GcQMVALN~Qt~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~~~~fdP~~~~~~~~~L~V~VisGq~~ 481 (598)
T PLN02230 402 NYKPQIGWMSGAQMIAFNMQGYGRALWLMEGMFRANGGCGYVKKPDFLMDAGPNGQDFYPKDNSCPKKTLKVKVCMGDGW 481 (598)
T ss_pred CCCchhHhcCceEEeeecccCCChHHHhhcchhccCCCCCceECCHHhcCCCccccccCCCcCCCcCcEEEEEEEEccCc
Confidence 99999999999999999999999999999999999999999999999999766556799988777788999999999999
Q ss_pred CcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEeccCCCCCCccEE
Q 007734 475 YYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQ 554 (591)
Q Consensus 475 ~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq 554 (591)
++++++++.+.++++||||+|+|+|.|.|+.++||+++.|++||+|||+|+|.+..||+|+|||.|+|+|..++++|+||
T Consensus 482 ~l~~~k~~~~~~s~~DpyV~Vei~Gvp~D~~~~kT~v~~n~~nP~Wneef~F~l~vPELAllRf~V~d~d~~~~ddfiGQ 561 (598)
T PLN02230 482 LLDFKKTHFDSYSPPDFFVRVGIAGAPVDEVMEKTKIEYDTWTPIWNKEFIFPLAVPELALLRVEVHEHDINEKDDFGGQ 561 (598)
T ss_pred cCCCccccCCCCCCCCceEEEEEEECCCCCcccceeccCCCCCCccCCeeEEEEEcCceeEEEEEEEECCCCCCCCEEEE
Confidence 87666666677889999999999999999999999988888999999999999999999999999999998788999999
Q ss_pred EEEECCccCCcceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 555 TCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 555 ~~ipL~sL~~GyR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
+++||++|++|||||||+|+.|+++.+++|||||+|.
T Consensus 562 ~~lPv~~Lr~GyR~V~L~~~~G~~l~~~~Ll~~f~~~ 598 (598)
T PLN02230 562 TCLPVSEIRQGIHAVPLFNRKGVKYSSTRLLMRFEFV 598 (598)
T ss_pred EEcchHHhhCccceEeccCCCcCCCCCCeeEEEEEeC
Confidence 9999999999999999999999999999999999985
No 3
>PLN02228 Phosphoinositide phospholipase C
Probab=100.00 E-value=7.3e-161 Score=1311.18 Aligned_cols=559 Identities=56% Similarity=0.970 Sum_probs=485.7
Q ss_pred CcceeeeeeeecccCccCCCCchHHHHHHHHhhCCCCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccC
Q 007734 3 KQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRR 82 (591)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~r~ei~~if~~~~~~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~ 82 (591)
+++|+||+||.|+|+.....+|+||..||.+|++++.|+.++|.+||+++|++...+.+.|.+||++|+..... ..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~ei~~if~~~s~~~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~--~~~~ 79 (567)
T PLN02228 2 SESFKVCFCCSRSFKEKTREPPVSIKRLFEAYSRNGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVF--HHHG 79 (567)
T ss_pred CccceEEEEeCCcCCcCCCCCcHHHHHHHHHhcCCCccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhh--cccC
Confidence 68999999999999999999999999999999987889999999999999999888899999999999853211 1235
Q ss_pred CCCHHHHHHHhccCCCCCCCCCCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCC
Q 007734 83 GLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK 162 (591)
Q Consensus 83 ~l~~~~F~~~l~s~~n~~~~~~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~ 162 (591)
.|+++||++||+|.+|.++.++..|+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++
T Consensus 80 ~~~~~gF~~yl~s~~n~~~~~~~~v~qdm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~ 159 (567)
T PLN02228 80 LVHLNAFYRYLFSDTNSPLPMSGQVHHDMKAPLSHYFVYTGHNSYLTGNQVNSRSSVEPIVQALRKGVKVIELDLWPNPS 159 (567)
T ss_pred ccCHHHHHHHhcCcccCCCCccccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccCCC
Confidence 69999999999999999987667899999999999999999999999999999999999999999999999999999988
Q ss_pred CCCceEeeCCcccccchHHHHHHHHhhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCChh
Q 007734 163 KDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPE 242 (591)
Q Consensus 163 ~~~piv~HG~tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~ 242 (591)
+++||||||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+||.++.+....||||+
T Consensus 160 ~~~p~v~Hg~t~ts~i~f~~v~~~I~~~AF~~s~yPvIlslE~hc~~~qQ~~~a~~~~~~lg~~L~~~~~~~~~~lpsP~ 239 (567)
T PLN02228 160 GNAAEVRHGRTLTSHEDLQKCLNAIKDNAFQVSDYPVVITLEDHLPPNLQAQVAKMLTKTFRGMLFRCTSESTKHFPSPE 239 (567)
T ss_pred CCCCEEEeCCcccCceEHHHHHHHHHHhhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhHhhcCCCCCccCCCCChH
Confidence 77899999999999999999999999999999999999999999999999999999999999999998766678999999
Q ss_pred hccccEEEecCCCCchhhhhhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCcccccccccc
Q 007734 243 SLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNE 322 (591)
Q Consensus 243 ~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (591)
+||||||||+|+++...+.+... +. ..++.++..+.. . .+.. +...+ ..+.....
T Consensus 240 ~Lk~kilik~Kk~~~~~~~~~~~----~~--~~~~~~~~~~~~-~-------------~~~~----~~~~~-~~~~~~~~ 294 (567)
T PLN02228 240 ELKNKILISTKPPKEYLESKTVQ----TT--RTPTVKETSWKR-V-------------ADAE----NKILE-EYKDEESE 294 (567)
T ss_pred HHCCCEEEEecCCcccccccccc----cc--cccccccccccc-c-------------ccch----hhccc-cccccchh
Confidence 99999999999976543321100 00 000000000000 0 0000 00000 00111235
Q ss_pred chhhccceEeecccccCCcccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccc
Q 007734 323 APEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGW 402 (591)
Q Consensus 323 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W 402 (591)
.++|++|++++..+.++++.......|...+++||||+++.+++++.+.+|++||++||+||||+|+|+|||||||+.||
T Consensus 295 ~~~ls~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~hNkr~l~RvYP~g~RvdSSNy~P~~~W 374 (567)
T PLN02228 295 AVGYRDLIAIHAANCKDPLKDCLSDDPEKPIRVSMDEQWLETMVRTRGTDLVRFTQRNLVRIYPKGTRVDSSNYDPHVGW 374 (567)
T ss_pred hhhhhhheeeeccccccCcchhhccCcccceeeccCHHHHHHHHHhhHHHHHHHhhhhceeeCCCCCcCCCCCCCchhHh
Confidence 68899999999887776666554445556679999999999999999999999999999999999999999999999999
Q ss_pred cccceeeeeccCCCCcceeeeeeeeeecCceeeeecCCcccCCCCCCCccCCCCCCCCceeEEEEEEeccccCcCCCCCc
Q 007734 403 SHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTH 482 (591)
Q Consensus 403 ~~G~QmVALN~QT~D~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visa~~L~~~~~~~~ 482 (591)
++|||||||||||+|++||||+|||+.||+|||||||++||+.. ..|+|....|++.+|+|+||+|++|+.++...+
T Consensus 375 ~~G~QmVALN~QT~d~~M~lN~g~F~~NG~cGYVLKP~~Lr~~~---~~f~p~~~~p~~~~L~I~ViSGq~l~lp~~~~~ 451 (567)
T PLN02228 375 THGAQMVAFNMQGHGKQLWIMQGMFRANGGCGYVKKPRILLDEH---TLFDPCKRLPIKTTLKVKIYTGEGWDLDFHLTH 451 (567)
T ss_pred cCccEEeeecccCCChHHHhhcCchhhCCCCCceeCchhhcccc---cccCCccCCCcCceEEEEEEECCccCCCCCCCC
Confidence 99999999999999999999999999999999999999999853 479998888877889999999999865544444
Q ss_pred cCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCcc-CcEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCc
Q 007734 483 FDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW-NEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSE 561 (591)
Q Consensus 483 ~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvW-NEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~s 561 (591)
.+.++++||||+|++.|.|.|..++||+++.||+||+| ||+|+|.+..||+|+|||.|+|+|..+.++|+||+++||++
T Consensus 452 ~~~~~~~DpyV~Vei~G~p~D~~~~rTk~~~n~~nP~W~~e~f~F~~~~pELA~lRf~V~D~d~~~~d~figq~~lPv~~ 531 (567)
T PLN02228 452 FDQYSPPDFFVKIGIAGVPRDTVSYRTETAVDQWFPIWGNDEFLFQLRVPELALLWFKVQDYDNDTQNDFAGQTCLPLPE 531 (567)
T ss_pred CCCCCCCCcEEEEEEEecCCCCCcceeeccCCCCCceECCCeEEEEEEcCceeEEEEEEEeCCCCCCCCEEEEEEcchhH
Confidence 55667899999999999999999999999999999999 99999999999999999999999977779999999999999
Q ss_pred cCCcceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 562 LKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 562 L~~GyR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
|++|||||||+|..|+++.+|+|||||+|.
T Consensus 532 Lr~GYR~VpL~~~~G~~l~~atLfv~~~~~ 561 (567)
T PLN02228 532 LKSGVRAVRLHDRAGKAYKNTRLLVSFALD 561 (567)
T ss_pred hhCCeeEEEccCCCCCCCCCeEEEEEEEEc
Confidence 999999999999999999999999999973
No 4
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-160 Score=1305.99 Aligned_cols=558 Identities=48% Similarity=0.749 Sum_probs=486.7
Q ss_pred CCCcceeeeeeeecccCccCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhh
Q 007734 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIF 79 (591)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~r~ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~ 79 (591)
+.+|+||+|+|++++|.-. ++.||||.++|.+|+.+ ++|+.++|.+||+.+|++..++.+.|++||++|+..++ ..
T Consensus 182 ~~~~~~k~~~~~~~~~~~~-~~~rpev~~~f~~~s~~~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~--~~ 258 (746)
T KOG0169|consen 182 DNSQTGKLEEEEFVKFRKE-LTKRPEVYFLFVQYSHGKEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKE--FR 258 (746)
T ss_pred HhhccceehHHHHHHHHHh-hccCchHHHHHHHHhCCCCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhh--cc
Confidence 4689999999999999666 45566999999999987 99999999999999999999999999999999996554 12
Q ss_pred ccCCCCHHHHHHHhccCCCCCCCC-CCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEee
Q 007734 80 QRRGLNLEAFFKYLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIW 158 (591)
Q Consensus 80 ~~~~l~~~~F~~~l~s~~n~~~~~-~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~W 158 (591)
..+.|+++||++||+|.++.+++| |..|+|||+||||||||+||||||||||||.|+||+|+||+||++||||||||||
T Consensus 259 ~~~~l~ldgF~~yL~S~~~~~fdp~~~~V~qDM~qPLsHYFI~SSHNTYLtg~Ql~g~sSvegyI~ALk~GcR~vElD~W 338 (746)
T KOG0169|consen 259 RHGLLSLDGFTRYLFSPDCNPFDPIHRKVHQDMDQPLSHYFISSSHNTYLTGDQLGGPSSVEGYIRALKKGCRCVELDCW 338 (746)
T ss_pred ccceecHHHHHHHhcCccCCCCCcccchhhhcccCcchhheEeccccceecccccCCccccHHHHHHHHhCCeEEEEecc
Confidence 345699999999999999999976 6789999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceEeeCCcccccchHHHHHHHHhhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCC
Q 007734 159 PNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKE 237 (591)
Q Consensus 159 dg~~~~~piv~HG~tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~ 237 (591)
||++ ++|+|||||||||+|+|++||+|||+|||++|+|||||||||||+++||++||++|++||||+||.++.+ ..+.
T Consensus 339 dg~~-~epvV~HG~TlTs~I~l~~vl~aIk~~AF~~S~YPvIlsLE~Hc~~~qQ~~mA~~~~~ifGd~Ly~~~~~~~~~~ 417 (746)
T KOG0169|consen 339 DGPN-GEPVVYHGHTLTSKILLRDVLRAIKKYAFVTSPYPVILTLENHCSPDQQAKMAQMLKEIFGDMLYTPPPDSSLKE 417 (746)
T ss_pred cCCC-CCeeEecCcccccceeHHHHHHHHHHhcccCCCCCEEEEecccCCHHHHHHHHHHHHHHhhhheeccCCCCcccc
Confidence 9987 6899999999999999999999999999999999999999999999999999999999999999998865 5899
Q ss_pred CCChhhccccEEEecCCCCchhhhhhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccc
Q 007734 238 FPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDK 317 (591)
Q Consensus 238 lPSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (591)
||||++||||||||+||+++.+.... .+.++.....++++.+...+.+ .+......+
T Consensus 418 lPSPe~LK~KILik~Kk~~~~~~~~~---------------------~~~~~~~~~d~~~~~e~s~e~~--~~~~~~~~~ 474 (746)
T KOG0169|consen 418 LPSPEELKNKILIKGKKLKELLEADS---------------------KEPSSFEVTDEDEDKESSTEND--KSETDGQKK 474 (746)
T ss_pred CcCHHHHhcCEEEecCCCCccccccc---------------------cccccccccccccccccccccc--ccccccccc
Confidence 99999999999999999876554311 0000000000000000000000 000011122
Q ss_pred cccccchhhccceEeecccccCCcccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCC
Q 007734 318 SQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYN 397 (591)
Q Consensus 318 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~ 397 (591)
....++++|++||.|+.+++++++...++.+ .+++++||||+++.++++..+.+|+.||+++|+||||+|+|+||||||
T Consensus 475 ~~~~~~~els~Lv~~~~~~~~~~~~~~~~~~-~~~~~~S~sE~~~~k~~~~~~~~~v~~t~r~L~RvYP~~~R~dSSNyn 553 (746)
T KOG0169|consen 475 SRKILAPELSDLVAYHKSVPFGGFQLSLTVD-NKVERLSLSERKAKKLIKEYGPDFVRHTQRNLLRVYPKGLRVDSSNYN 553 (746)
T ss_pred hhhhhhHHHHHHHHHhhccccCCceeccccC-CccccCCccHHHHHHHHHHhhhHHHHHhHhheeeecCCccccCCCCCC
Confidence 2336789999999999999999888887764 678899999999999999999999999999999999999999999999
Q ss_pred CcccccccceeeeeccCCCCcceeeeeeeeeecCceeeeecCCcccCCCCCCCccCCCCC-CCCceeEEEEEEeccccCc
Q 007734 398 PLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVK-LPAKKTLKVTVYMGEGWYY 476 (591)
Q Consensus 398 P~~~W~~G~QmVALN~QT~D~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~-~p~~~~L~V~Visa~~L~~ 476 (591)
|+.||++|||||||||||+|++||||+|||+.||||||||||.+||+. +..|+|... .|++.+|+|+|++|++|+.
T Consensus 554 Pq~~W~~G~QmVAlN~Qt~G~~l~L~~G~Fr~NGgCGYVlKP~~L~~~---~~~F~P~~~~~~~~~tL~IkI~sGq~~~~ 630 (746)
T KOG0169|consen 554 PQEFWNHGCQMVALNFQTPGRMLDLNQGMFRANGGCGYVLKPDFLLDS---GSTFDPKSNLPPVKKTLKIKIISGQGWLP 630 (746)
T ss_pred hHHHHhcCceEEEEecCCCChhhhhhhhhhccCCCccceECcHHHcCC---CCccCCCCCCCCCCceeEEEEEecCcccC
Confidence 999999999999999999999999999999999999999999999994 348999666 4455589999999999976
Q ss_pred CCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCC-CCCccCcEEEEeeecCCccEEEEEEEeccCCCCCCccEEE
Q 007734 477 DFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQT 555 (591)
Q Consensus 477 ~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn-~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~ 555 (591)
++..+.. ....||||.|+|.|+|.|+.+.+|+++.+| +||.|+|+|+|++..||+|+|||.|+|+|..++|||+||+
T Consensus 631 ~~~~~~~--~~~~dP~v~VeI~Gvp~D~~~~~Tk~v~~NgfnP~W~e~f~F~l~vPELAliRF~V~d~d~~~~ddF~GQ~ 708 (746)
T KOG0169|consen 631 DFGKTKF--GEISDPDVYVEIAGVPADCAEQKTKVVKNNGFNPIWDEEFEFQLSVPELALIRFEVHDYDYIGKDDFIGQT 708 (746)
T ss_pred CCCCCcc--cccCCCCEEEEEcccccchhhhhceeeccCCcCcccCCeEEEEEeccceeEEEEEEEecCCCCccccccee
Confidence 5544432 356799999999999999999999977665 9999999999999999999999999999999999999999
Q ss_pred EEECCccCCcceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 556 CLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 556 ~ipL~sL~~GyR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
|+||++|++|||||||+|..|+.+..|+|||||+|.
T Consensus 709 tlP~~~L~~GyRhVpL~~~~G~~~~~asLfv~i~~~ 744 (746)
T KOG0169|consen 709 TLPVSELRQGYRHVPLLSREGEALSSASLFVRIAIV 744 (746)
T ss_pred eccHHHhhCceeeeeecCCCCccccceeEEEEEEEe
Confidence 999999999999999999999999999999999873
No 5
>PLN02952 phosphoinositide phospholipase C
Probab=100.00 E-value=7.5e-159 Score=1302.26 Aligned_cols=580 Identities=63% Similarity=1.092 Sum_probs=492.6
Q ss_pred CCCcceeeeeeeecccCccCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhh-chhh
Q 007734 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELK-HLNI 78 (591)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~r~ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~-~~~~ 78 (591)
|...+|++|.||.|+++...+++|+||..||.+|+++ +.||.++|.+||+++|++..++.++|.+||++|.... +...
T Consensus 14 ~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~~~ 93 (599)
T PLN02952 14 SGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGGGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHVTR 93 (599)
T ss_pred CCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhcccccc
Confidence 3455899999999999999999999999999999977 8999999999999999998889999999999886332 2223
Q ss_pred hccCCCCHHHHHHHhccC-CCCCCCCCCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEe
Q 007734 79 FQRRGLNLEAFFKYLFGD-INPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDI 157 (591)
Q Consensus 79 ~~~~~l~~~~F~~~l~s~-~n~~~~~~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~ 157 (591)
+.+..|+++||++||+|. .|.+.. ..|+|||++|||||||||||||||+|+||.|+||+|+|++||++|||||||||
T Consensus 94 ~~~~~l~~~~F~~~l~s~~~~~p~~--~~v~qdm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~ 171 (599)
T PLN02952 94 YTRHGLNLDDFFHFLLYDDLNGPIT--PQVHHDMTAPLSHYFIYTGHNSYLTGNQLSSDCSEVPIVKALQRGVRVIELDL 171 (599)
T ss_pred ccccCcCHHHHHHHHcCcccccccc--ccccccCCCchhhheeeccccccccCCccCCcCCHHHHHHHHHcCCcEEEEEe
Confidence 445679999999999974 555554 57999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCceEeeCCcccccchHHHHHHHHhhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCC
Q 007734 158 WPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKE 237 (591)
Q Consensus 158 Wdg~~~~~piv~HG~tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~ 237 (591)
|||+++++|+||||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+||.|+.+....
T Consensus 172 wdg~~~~~p~v~Hg~t~ts~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~p~~~~~~~ 251 (599)
T PLN02952 172 WPGSTKDEILVLHGRTLTTPVPLIKCLKSIRDYAFSSSPYPVIITLEDHLTPDLQAKVAEMATQIFGQMLYYPESDSLVQ 251 (599)
T ss_pred ecCCCCCCCEEEeCCccccCcCHHHHHHHHHHHhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCC
Confidence 99998888999999999999999999999999999999999999999999999999999999999999999987666789
Q ss_pred CCChhhccccEEEecCCCCchhhhhhhhh-hh--ccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCcc
Q 007734 238 FPSPESLKRRIIISTKPPKEYLEAKEEKE-KE--NDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDS 314 (591)
Q Consensus 238 lPSP~~Lk~KIlik~K~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (591)
||||++||||||||+|+++..++.+.... +. .........++++ .+...+..... +.+.+.. .+....
T Consensus 252 lpsP~~Lk~kilik~Kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----~~~~~~~--~~~~~~ 322 (599)
T PLN02952 252 FPSPESLKHRIIISTKPPKEYLESSGPIVIKKKNNVSPSGRNSSEET---EEAQTLESMLF----EQEADSR--SDSDQD 322 (599)
T ss_pred CCChHHhCCCEEEEecCCchhccccccccccccccCCcccccCCccc---ccccccccccc----ccccccc--ccccch
Confidence 99999999999999999876654431100 00 0000000000000 00000000000 0000000 000001
Q ss_pred ccccccccchhhccceEeecccccCCcccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCC
Q 007734 315 DDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSS 394 (591)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SS 394 (591)
+.+......+++++|+.|+.+++++.+.+.++..+.+++++||||+++.+++++++.+|++||++||+||||+|+|+|||
T Consensus 323 ~~~~~~~~~~~~~~l~~~~~~k~~~~~~~~~~~~~~~~~~~SlsE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~R~dSs 402 (599)
T PLN02952 323 DNKSGELQKPAYKRLITIHAGKPKGTLKDAMKVAVDKVRRLSLSEQELEKAATTNGQDVVRFTQRNILRIYPKGTRITSS 402 (599)
T ss_pred hhhcccccchhhhhheEEeccccccccchhhhcccccccccccCHHHHHHHHHhhHHHHHHHhhhhceeeCCCCCcCcCC
Confidence 11223345688999999999998887777666556667889999999999999999999999999999999999999999
Q ss_pred CCCCcccccccceeeeeccCCCCcceeeeeeeeeecCceeeeecCCcccCCCCCCCccCCCCCCCCceeEEEEEEecccc
Q 007734 395 NYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGW 474 (591)
Q Consensus 395 N~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visa~~L 474 (591)
||||+.||++|||||||||||+|++||||+|||+.||+|||||||++||...+.+..|+|....|++++|+|+||+|++|
T Consensus 403 Ny~P~~~W~~G~QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVlKP~~lr~~~~~~~~fdp~~~~~~~~~L~V~VisGq~l 482 (599)
T PLN02952 403 NYKPLIGWMHGAQMIAFNMQGYGKSLWLMHGMFRANGGCGYLKKPDFLMKKGFHDEVFDPKKKLPVKKTLKVKVYLGDGW 482 (599)
T ss_pred CCCchhHhcCccEEeeecccCCChHHHhhhchhccCCCCCceECCHHHcccCCcccccCCCCCCCccceEEEEEEECccc
Confidence 99999999999999999999999999999999999999999999999998655456799998888888999999999999
Q ss_pred CcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEeccCCCCCCccEE
Q 007734 475 YYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQ 554 (591)
Q Consensus 475 ~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq 554 (591)
+++....+.+.++++||||+|++.|.|.|..++||+++.||+||+|||+|.|.+..||+|+|+|.|+|+|..+.++|+||
T Consensus 483 ~lp~~~~~~~~~~~~D~yV~V~i~G~p~D~~~~kTkvi~nN~nPvWnE~F~F~i~~PELAllrf~V~D~D~~~~ddfiGq 562 (599)
T PLN02952 483 RLDFSHTHFDSYSPPDFYTKMYIVGVPADNAKKKTKIIEDNWYPAWNEEFSFPLTVPELALLRIEVREYDMSEKDDFGGQ 562 (599)
T ss_pred CCCCccccCCccCCCCceEEEEEeccCCCCcceeeeeccCCCCcccCCeeEEEEEcCCccEEEEEEEecCCCCCCCeEEE
Confidence 87554455677788999999999999999999999999999999999999999999999999999999998888999999
Q ss_pred EEEECCccCCcceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 555 TCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 555 ~~ipL~sL~~GyR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
+++||++|++|||||||+|..|++++.++|||||+|.
T Consensus 563 ~~lPv~~Lr~GyR~VpL~~~~G~~l~~a~Llv~f~~~ 599 (599)
T PLN02952 563 TCLPVSELRPGIRSVPLHDKKGEKLKNVRLLMRFIFV 599 (599)
T ss_pred EEcchhHhcCCceeEeCcCCCCCCCCCEEEEEEEEeC
Confidence 9999999999999999999999999999999999984
No 6
>PLN02223 phosphoinositide phospholipase C
Probab=100.00 E-value=2.6e-151 Score=1218.73 Aligned_cols=523 Identities=42% Similarity=0.764 Sum_probs=448.0
Q ss_pred eeeecccCccCCCCchHHHHHHHHhhCC-CCcCHHHHHHHH---HHHcCCCCCCHHHHHHHHHHHhhhhc-hhhh-ccCC
Q 007734 10 FCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFL---IEVQKEDKASKEDAQAIIDSLRELKH-LNIF-QRRG 83 (591)
Q Consensus 10 ~~~~~~~~~~~~~~r~ei~~if~~~~~~-~~~~~~~~~~Fl---~~~Q~~~~~~~~~~~~ii~~~~~~~~-~~~~-~~~~ 83 (591)
+.|.|+|+.+.+.+++||..+|.+|+++ ..|+.++|.+|| .++|+|..++.++|+.|++++...++ ...+ ..+.
T Consensus 1 ~~~~~~~~~~~~~~p~~v~~~f~~~~~~~~~m~~~~l~~fl~~l~~~q~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~ 80 (537)
T PLN02223 1 MLLRKKFEMHPANQPDLILNFFGNEFHGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIAAELKRRKCDILAFRNLRC 80 (537)
T ss_pred CccccCCCCCCCCCcHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhhcccchhhhhccc
Confidence 4689999999999999999999999876 999999999999 99999999999999999999874432 2333 2367
Q ss_pred CCHHHHHHHhccCC-CCCCCCCCCc-ccCCCCcccceeeeccCcccccCCCCCCC-CChHHHHHHHhCCCcEEEEEeecC
Q 007734 84 LNLEAFFKYLFGDI-NPPLSPTPVV-HHDMTAPVSHYFIYTGHNSYLTGNQLNSD-CSDVPIIRALQKGVRVIELDIWPN 160 (591)
Q Consensus 84 l~~~~F~~~l~s~~-n~~~~~~~~v-~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~-Ss~e~Y~~aL~~GCRcvElD~Wdg 160 (591)
|+++||++||+|.+ |.+.. ..| +|||++|||||||||||||||+||||.|. ||+|+|++||++||||||||||||
T Consensus 81 l~~~~f~~~L~s~~~n~~~~--~~v~~~DM~~PLshYfI~SSHNTYL~g~Ql~~~~ss~e~y~~aL~~GcRcvElD~W~~ 158 (537)
T PLN02223 81 LELDHLNEFLFSTELNPPIG--DQVRHHDMHAPLSHYFIHTSLKSYFTGNNVFGKLYSIEPIIDALEQGVRVVELDLLPD 158 (537)
T ss_pred cCHHHHHHHhcCcccCCccc--cccCcccCCCchhhheeeccccccccCCcccCCcccHHHHHHHHHcCCcEEEEEecCC
Confidence 99999999999854 55443 356 99999999999999999999999999999 999999999999999999999987
Q ss_pred CCCCCceEeeCCcccccchHHHHHHHHhhhccccC-CCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCC
Q 007734 161 SKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVAS-EYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEF 238 (591)
Q Consensus 161 ~~~~~piv~HG~tlts~i~f~dvi~aI~~~AF~~S-~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~l 238 (591)
++ ++|+|+||||||++|+|+|||+||++|||++| +||||||||||||++||.+||++|++||||+||+++. +....|
T Consensus 159 ~~-~~~~v~hG~tlts~i~f~~vl~aI~~~AF~~s~~yPvIlslE~Hcs~~qQ~~~A~~l~~i~Gd~L~~~~~~~~~~~l 237 (537)
T PLN02223 159 GK-DGICVRPKWNFEKPLELQECLDAIKEHAFTKCRSYPLIITFKDGLKPDLQSKATQMIDQTFGDMVYHEDPQHSLEEF 237 (537)
T ss_pred CC-CCCeEeeCCceecceEHHHHHHHHHHHhhhcCCCCceEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCCccccccC
Confidence 54 67899999999999999999999999999998 9999999999999999999999999999999999764 557899
Q ss_pred CChhhccccEEEecCCCCchhhhhhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCcccccc
Q 007734 239 PSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKS 318 (591)
Q Consensus 239 PSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (591)
|||++||||||||+|++++.++++. ++ +. . . .++ + .+..+
T Consensus 238 PSP~~Lk~kIlik~K~~~~~~~~~~---------------~~---~~-~-~----------~~~-~----~~~~~----- 277 (537)
T PLN02223 238 PSPAELQNKILISRRPPKELLYAKA---------------DD---GG-V-G----------VRN-E----LEIQE----- 277 (537)
T ss_pred CChHHhCCCEEEEcCCCcccccccc---------------cc---cc-c-c----------ccc-c----ccccc-----
Confidence 9999999999999999865433210 00 00 0 0 000 0 00000
Q ss_pred ccccchhhccceEeecccccCCcccccccCCCceeEeecCHHHHHHHhh--hcchhHHHhhccceeEEecCCCC-CCCCC
Q 007734 319 QHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVG--TYGNDIVRFTQRNLLRIYPKGIR-VDSSN 395 (591)
Q Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~--~~~~~~~~~~~~~l~RvYP~g~R-i~SSN 395 (591)
....++|..++.++..++++.+. +++|.++.++.+ .++.++++||++||+||||+|+| +||||
T Consensus 278 -~~~~~~y~~li~~~~~~~~~~~~-------------~~~~~~~~~~~~~s~~~~~~v~ft~~~l~RiYPkG~R~~dSSN 343 (537)
T PLN02223 278 -GPADKNYQSLVGFHAVEPRGMLQ-------------KALTGKADDIQQPGWYERDIISFTQKKFLRTRPKKKNLLINAP 343 (537)
T ss_pred -cccccceeeeeeeeccccccchh-------------hhhccchhhhhhccccchhhhhhcccceEEECCCCCccccCCC
Confidence 12246788999998887654332 334444444433 24678999999999999999999 59999
Q ss_pred CCCcccccccceeeeeccCCCCcceeeeeeeeeecCceeeeecCCcccCCCCCCCccCCCCCCCCceeEEEEEEeccccC
Q 007734 396 YNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWY 475 (591)
Q Consensus 396 ~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~Visa~~L~ 475 (591)
|||+.+|++|||||||||||+|++||||+|||+.||+|||||||++||+.++.+ .|+|....+.+.+|+|+||+|++|+
T Consensus 344 YnP~~~W~~GcQmVALN~QT~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~~-~FdP~~~~~~~~~L~V~Visgq~~~ 422 (537)
T PLN02223 344 YKPQRAWMHGAQLIALSRKDDKEKLWLMQGMFRANGGCGYVKKPDFLLNAGPSG-VFYPTENPVVVKILKVKIYMGDGWI 422 (537)
T ss_pred CCChhhcccceeEeeeccCCCChhHHhhcchhccCCCCCceECChhhccCCccc-ccCCCCCcccceEEEEEEEEccccc
Confidence 999999999999999999999999999999999999999999999999876543 7999765556788999999999997
Q ss_pred cCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEeccCCCCCCccEEE
Q 007734 476 YDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQT 555 (591)
Q Consensus 476 ~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~ 555 (591)
.+++++. +..+++||||+|+|.|.|.|+.++||++..|++||+|||+|+|.+.+||+|+|+|.|+|+|..+.++|+||+
T Consensus 423 ~~~~k~~-~~~s~~DpyV~VeI~Gvp~D~~~~kT~v~nNg~nPvWne~F~F~i~~PELAlLrf~V~D~D~~~~ddfiGQ~ 501 (537)
T PLN02223 423 VDFKKRI-GRLSKPDLYVRISIAGVPHDEKIMKTTVKNNEWKPTWGEEFTFPLTYPDLALISFEVYDYEVSTADAFCGQT 501 (537)
T ss_pred CCccccc-CCCCCCCeEEEEEEeeccCCcceeEEEeCCCCcCceecceeEEEEEccCceEEEEEEEecCCCCCCcEEEEE
Confidence 5443332 445789999999999999999989998777779999999999999999999999999999988889999999
Q ss_pred EEECCccCCcceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 556 CLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 556 ~ipL~sL~~GyR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
++||++|++|||+|||+|+.|+++..++|||||+|.
T Consensus 502 ~LPv~~Lr~GyR~VpL~~~~g~~l~~~~Ll~~f~~~ 537 (537)
T PLN02223 502 CLPVSELIEGIRAVPLYDERGKACSSTMLLTRFKWS 537 (537)
T ss_pred ecchHHhcCCceeEeccCCCcCCCCCceEEEEEEeC
Confidence 999999999999999999999999999999999984
No 7
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=100.00 E-value=1.4e-141 Score=1152.29 Aligned_cols=552 Identities=31% Similarity=0.470 Sum_probs=441.9
Q ss_pred cCCCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCC--------CCHHHHHHHHHHHhhhhchhhhccCCCCHHH
Q 007734 19 AASEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDK--------ASKEDAQAIIDSLRELKHLNIFQRRGLNLEA 88 (591)
Q Consensus 19 ~~~~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~--------~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~ 88 (591)
..+|.|+||..||.+++++ .+||+++|.+||++.|+++. ++..++..||++|++... ...++.|+.+|
T Consensus 215 ~klcpR~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~--~a~~gqms~dg 292 (1189)
T KOG1265|consen 215 NKLCPRPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSD--NAEKGQMSTDG 292 (1189)
T ss_pred HhcCCchhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchh--hhhccccchhh
Confidence 5679999999999999976 89999999999999999975 456899999999995432 12467899999
Q ss_pred HHHHhccCCCCCCCC-CCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCC-CCc
Q 007734 89 FFKYLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKK-DNV 166 (591)
Q Consensus 89 F~~~l~s~~n~~~~~-~~~v~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~-~~p 166 (591)
|.+||++++|.++.+ ....++||+||||||||||||||||||+||.|.||+|+|++||+.||||||||||||.+. +||
T Consensus 293 f~ryl~gdEn~i~a~~~l~l~~dM~qPl~hYFINSSHNTYlTg~Ql~g~sSvEmYRQvLLsGcRCVELDcWdgk~~d~EP 372 (1189)
T KOG1265|consen 293 FVRYLMGDENAIVALDKLDLVTDMDQPLSHYFINSSHNTYLTGGQLGGKSSVEMYRQVLLSGCRCVELDCWDGKGEDEEP 372 (1189)
T ss_pred hHHHhhCCccccccHHHHHhhhhhccchhhhhccccccceeecccccCcchHHHHHHHHHhcCceEEeeeecCCCCCCCc
Confidence 999999999999864 356899999999999999999999999999999999999999999999999999999543 469
Q ss_pred eEeeCCcccccchHHHHHHHHhhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-----CCCCCCCh
Q 007734 167 DVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-----CLKEFPSP 241 (591)
Q Consensus 167 iv~HG~tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-----~~~~lPSP 241 (591)
||+||.|+|+.|.|+|||+||+++||+||+||||||+|||||+.||.+||+||++||||+|++.|.+ +...||||
T Consensus 373 vITHG~tm~teI~fKdVleAIaEtAFkTSpyPVILSfENH~s~kQQaKMa~ycr~IFGDmLL~~PLe~~PL~pgv~lPsP 452 (1189)
T KOG1265|consen 373 VITHGFTMTTEIFFKDVLEAIAETAFKTSPYPVILSFENHCSPKQQAKMAEYCRDIFGDMLLTEPLEDYPLEPGVPLPSP 452 (1189)
T ss_pred eeecccchhhhhhHHHHHHHHHHhhccCCCCceEEeecccCCHHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCCCCCH
Confidence 9999999999999999999999999999999999999999999999999999999999999996533 34789999
Q ss_pred hhccccEEEecCCCCchh-hhhh-hhhhhcccc-CCCCC----Cccc---ccC-----CC----CCCccccCCCCCC---
Q 007734 242 ESLKRRIIISTKPPKEYL-EAKE-EKEKENDSQ-RGKGS----ADEE---AWG-----KE----VPNLKSLNNSACD--- 299 (591)
Q Consensus 242 ~~Lk~KIlik~K~~~~~~-~~~~-~~~~~~~~~-~~~~~----~~~~---~~~-----~~----~~~~~~~~~~~~~--- 299 (591)
++||+|||||+||..-.. +... ...+..+.+ .+..+ .++. ..| .+ -+.+......++.
T Consensus 453 ~~Lr~KILIKnKKk~~~~~~~~~~~~~~~~~e~~~~s~~~~~~~~d~~~~~~~~~~~ge~~~~~~~~~g~~~~~~~~~~~ 532 (1189)
T KOG1265|consen 453 EDLRRKILIKNKKKHFEKHESDQFRSRKKLGEEAEGSSSPSAEAEDDSEEQVGLSLSGEERAHPEVELGGERPADDEAHP 532 (1189)
T ss_pred HHHhhhhhccccccccccccccccccccccCcccccCCCCcccccCccccccCcccccccccCcccccccccCCccccch
Confidence 999999999999753110 0000 000000000 00000 0000 000 00 0001111111000
Q ss_pred CCCCCCCCCCCCCc--------cccccccccchhhccceEeecccccCCcccccccCCCceeEeecCHHHHHHHhhhcch
Q 007734 300 KDDFDGGVDNDEED--------SDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGN 371 (591)
Q Consensus 300 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~ 371 (591)
+.+++....+...+ ........+++++|+||.|.....+.+|.-+-+ ...++.|+||+|+++..++++++-
T Consensus 533 E~~ee~~~~~l~e~~~~~~~~e~~ag~e~~a~~e~S~lVNyiqpvkf~sfe~a~k-rN~~f~msSf~E~~~~~~Lk~~~i 611 (1189)
T KOG1265|consen 533 ELDEESEAKQLSEDPEKTTADEGTAGAETNAHEEMSSLVNYIQPVKFSSFEIAEK-RNRHFEMSSFDESTGLGYLKKSPI 611 (1189)
T ss_pred hhhhhhhhhcccccccccCCCccccchhhhhHHHHHhhhhhcccccccchhhhhh-hcceeeeeechhHHHHHHHHhCch
Confidence 00000000000000 000111235678999998754444444543333 346789999999999999999999
Q ss_pred hHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeeeeeeecCceeeeecCCcccCCCCCCCc
Q 007734 372 DIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEV 451 (591)
Q Consensus 372 ~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~ 451 (591)
+||+||+++|+||||+|+|||||||+||.|||+|||||||||||+|.+||||.|||..||+|||+|||+|||++. +.
T Consensus 612 efV~yNK~QlSRIYPKgtRvdSSNymPqifWnaGcQmVsLNfQT~dlaMQlN~g~FEyNG~sGYllKPdfmRrpD---r~ 688 (1189)
T KOG1265|consen 612 EFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQTPDLAMQLNMGMFEYNGGSGYLLKPDFMRRPD---RQ 688 (1189)
T ss_pred HHhhhhhHhhhccccCcccccccccchHHHHhccceEEEeeccCccHHHHhhhhheeecCCccceeChHHhhCCC---cC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999974 68
Q ss_pred cCCCCCCCC----ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCcee--eeccccCCC-CCCccCc-E
Q 007734 452 FDPKVKLPA----KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVM--KKTKTLEDN-WIPSWNE-E 523 (591)
Q Consensus 452 f~p~~~~p~----~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k--~kTkvi~nn-~NPvWNE-t 523 (591)
|||....|+ ..++.|+||||+-|.. .....||+|.+.|+|.|..+ +||+++.+| +||+|+| .
T Consensus 689 fdPFse~~VdgvIA~t~sV~VISgqFLSd----------rkvgtyVEVdmfgLP~Dt~Rk~~rtrt~~~n~~npvy~eep 758 (1189)
T KOG1265|consen 689 FDPFSESPVDGVIAATLSVTVISGQFLSD----------RKVGTYVEVDMFGLPTDTIRKEFRTRTVQGNSFNPVYEEEP 758 (1189)
T ss_pred cCCcccCcccceEEeeEEEEEEeeeeccc----------cccCceEEEEecCCCchhhhhhhhhccccCCCCCcccccCC
Confidence 999987664 4679999999997732 12346999999999999764 589998876 9999985 5
Q ss_pred EEEe-eecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcceEEEccCCCCCcccCeEEEEEEEE
Q 007734 524 FEFP-LSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 524 f~F~-v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~GyR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
|.|. |..|++|+|||.||++. ..||||..+||+.|+.|||||.|++..|+++..++|||.|+.
T Consensus 759 fvF~KVvLpeLA~lRiavyeEg----gK~ig~RIlpvd~l~~GYrhv~LRse~Nqpl~lp~Lfv~i~~ 822 (1189)
T KOG1265|consen 759 FVFRKVVLPELASLRIAVYEEG----GKFIGQRILPVDGLNAGYRHVCLRSESNQPLTLPALFVYIVL 822 (1189)
T ss_pred cccceecccchhheeeeeeccC----CceeeeeccchhcccCcceeEEecCCCCCccccceeEEEEEe
Confidence 9995 88999999999999975 679999999999999999999999999999999999999975
No 8
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=100.00 E-value=4.4e-131 Score=1060.57 Aligned_cols=536 Identities=31% Similarity=0.500 Sum_probs=415.6
Q ss_pred CCcCHHHHHHHHHHHcCCCCCCH-HHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhccCCCCCCCCC-CCcccC-CCCc
Q 007734 38 GTMTVDHLHRFLIEVQKEDKASK-EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPT-PVVHHD-MTAP 114 (591)
Q Consensus 38 ~~~~~~~~~~Fl~~~Q~~~~~~~-~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s~~n~~~~~~-~~v~qd-M~~P 114 (591)
.+.+..+|++||..+|++.+++. ..+++++.+|-+. ...-.+.+.|++++|..||+|..|++++++ ..|..| |+.|
T Consensus 236 ~vV~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~D-~~re~~EPyl~v~EFv~fLFSreNslWd~k~d~V~~d~Mn~P 314 (1267)
T KOG1264|consen 236 SVVYLQEFQRFLIHEQQEHWASDRNAVREFMRKFIDD-TMRETAEPYLFVDEFVTFLFSRENSLWDSKYDAVDMDDMNNP 314 (1267)
T ss_pred eEeeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHhh-hhhhccCcceeHHHHHHHHhhcccccccccccccchhhhcCc
Confidence 57889999999999999988755 3456666666532 222234678999999999999999999876 457665 9999
Q ss_pred ccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhhcccc
Q 007734 115 VSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVA 194 (591)
Q Consensus 115 Ls~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI~~~AF~~ 194 (591)
||||||+||||||||||||.++||.|+|+|||++||||||||||||+|+ .|+||||||+||||.|.|||++||+|||++
T Consensus 315 LShYWIsSSHNTYLTGDQlrSESSleaYar~LrMGCRCIELDCWdGpd~-~pvIyHG~T~TtKIkf~DVlhtIkdhAFvt 393 (1267)
T KOG1264|consen 315 LSHYWISSSHNTYLTGDQLRSESSLEAYARCLRMGCRCIELDCWDGPDG-KPVIYHGHTRTTKIKFDDVLHTIKDHAFVT 393 (1267)
T ss_pred chhheeeccCcceecccccccccCHHHHHHHHHhCCeEEEeecccCCCC-CceEEeccceeeeeehHHHHHHHHhhceec
Confidence 9999999999999999999999999999999999999999999999985 799999999999999999999999999999
Q ss_pred CCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccccEEEecCCCCchhhhhh-hhhhhcc--
Q 007734 195 SEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKE-EKEKEND-- 270 (591)
Q Consensus 195 S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~-~~~~~~~-- 270 (591)
|+||||||||.|||++||+.||+.+++||||+|++.|.+ +...||||.|||+|||||+||.....+-.. ..+.+++
T Consensus 394 SeyPVILSIEd~CSv~qQR~mAq~~keV~GD~LLTkP~er~~~qLPSP~qLrrKIiiKHKKLp~~edva~~m~~~edd~~ 473 (1267)
T KOG1264|consen 394 SEYPVILSIEDHCSVEQQRNMAQAFKEVFGDLLLTKPTERSADQLPSPSQLRRKIIIKHKKLPPREDVAVNMEDKEDDHK 473 (1267)
T ss_pred cCCcEEEEhhhcCChHHHHHHHHHHHHHHhhHHhcCcccchhhcCCCHHHHhhhHhhhcccCCchhhhchhhhcccccch
Confidence 999999999999999999999999999999999997754 478999999999999999998754211100 0000000
Q ss_pred --------------------------------------ccCCC--------CCCcc----ccc--C----CC-C------
Q 007734 271 --------------------------------------SQRGK--------GSADE----EAW--G----KE-V------ 287 (591)
Q Consensus 271 --------------------------------------~~~~~--------~~~~~----~~~--~----~~-~------ 287 (591)
.+... ..++| +.| | .. .
T Consensus 474 nsvk~GiLy~kd~vdheWt~h~fvlt~~kl~ys~e~~~~~n~ndee~~kd~s~s~ElH~~E~WFHgkle~R~eAekll~e 553 (1267)
T KOG1264|consen 474 NSVKQGILYMKDPVDHEWTRHYFVLTDAKLSYSDEIEQTENPNDEEVPKDISPSTELHFGEKWFHGKLEGRTEAEKLLQE 553 (1267)
T ss_pred hhhhcceEEEecCCCCceeeeEEEEecceeEeehhccCcCCCCcccccccCCcchhhccchhhhhcccccchHHHHHHHH
Confidence 00000 00010 001 0 00 0
Q ss_pred ---------------------CC--cc----c-------cCCCCCCC----------------------------C----
Q 007734 288 ---------------------PN--LK----S-------LNNSACDK----------------------------D---- 301 (591)
Q Consensus 288 ---------------------~~--~~----~-------~~~~~~~~----------------------------~---- 301 (591)
.+ ++ . ....++.+ .
T Consensus 554 ycke~G~~dGtFlVReS~tFvgDytLSfwr~grv~HcRIrsk~e~gt~Kyyl~dN~vfdslY~LI~~Y~~~~Lr~aeF~m 633 (1267)
T KOG1264|consen 554 YCKETGGKDGTFLVRESETFVGDYTLSFWRSGRVQHCRIRSKMEGGTLKYYLTDNLVFDSLYALIQHYRETHLRCAEFEM 633 (1267)
T ss_pred HHHHhCCCCccEEEeeccccccceeeeeeECCceeeEEEEeeecCCceeEEEecchhHHHHHHHHHHHHhccccccceEE
Confidence 00 00 0 00000000 0
Q ss_pred ---C--CC---CCC---------------------CC---------CCC-------------------------------
Q 007734 302 ---D--FD---GGV---------------------DN---------DEE------------------------------- 312 (591)
Q Consensus 302 ---~--~~---~~~---------------------~~---------~~~------------------------------- 312 (591)
+ +. .++ .+ +..
T Consensus 634 ~LtePvPqp~~He~k~W~~as~treqAE~mL~rvp~DGaFLiR~~~~~nsy~iSfr~~gkikHcRi~rdGr~fvl~t~~F 713 (1267)
T KOG1264|consen 634 RLTEPVPQPNPHESKPWYHASLTREQAEDMLMRVPRDGAFLIRKREGSNSYAISFRARGKIKHCRINRDGRHFVLGTSAF 713 (1267)
T ss_pred EecCCCCCCCcccCCccccccccHHHHHHHHhhCccCcceEEEeccCCceEEEEEEEcCcEeEEEEccCceEEEeccHHH
Confidence 0 00 000 00 000
Q ss_pred --------------------------------------------------------cccc--------------------
Q 007734 313 --------------------------------------------------------DSDD-------------------- 316 (591)
Q Consensus 313 --------------------------------------------------------~~~~-------------------- 316 (591)
..++
T Consensus 714 esLv~lv~yY~k~~lyR~mkLr~PVnee~l~~~~~e~d~~a~~d~~r~pg~yme~n~~~~~vt~kAL~~Yka~r~DELSF 793 (1267)
T KOG1264|consen 714 ESLVELVSYYEKHPLYRKMKLRYPVNEELLERYNTERDINALYDVSRMPGDYMEINPSMPQVTVKALYDYKAKRSDELSF 793 (1267)
T ss_pred HHHHHHHHHHhcChhhhcccccCcCCHHHHHHhhhhcccccccccccCCCCccccCccccchhhhhhhccccCCcccccc
Confidence 0000
Q ss_pred ----------------------------------------------------------------------------c---
Q 007734 317 ----------------------------------------------------------------------------K--- 317 (591)
Q Consensus 317 ----------------------------------------------------------------------------~--- 317 (591)
+
T Consensus 794 pk~aiItnv~keeg~wWrGdYGg~iq~wfPsnyVeei~~~~~~~~e~~~lne~plGtl~rgi~d~~~~nvv~~~q~~n~~ 873 (1267)
T KOG1264|consen 794 PKGAIITNVSKEEGGWWRGDYGGRIQQWFPSNYVEEISTADFEELEKQILNENPLGTLCRGILDLNTYNVVKAPQGKNQK 873 (1267)
T ss_pred cccceeEeeeccCCceeecccccceeeeccHHHhhhhccccccchhhhhhcccccchhhhccccccccceeecccccCCc
Confidence 0
Q ss_pred ---------------------------------------------------cccccchhhccceEeecccccCCcccccc
Q 007734 318 ---------------------------------------------------SQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (591)
Q Consensus 318 ---------------------------------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (591)
...+++.|+++||+|+...|+.. .+ +
T Consensus 874 ~~vf~l~~~~~~~~~~~~aadsqEe~~eW~k~i~E~t~~a~tk~s~~k~kEk~krIA~ElSdLVVYcr~vp~~~-~~-~- 950 (1267)
T KOG1264|consen 874 SFVFILEPKWQGKPPVEFAADSQEELFEWFKSIREITWKADTKESEMKYKEKNKRIAIELSDLVVYCRPVPKTK-DN-L- 950 (1267)
T ss_pred ceEEEechhhhcCCceEEecCchHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhceEEEEecCCCcc-cc-c-
Confidence 00112334445555554444210 00 0
Q ss_pred cCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeeee
Q 007734 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGM 426 (591)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~ 426 (591)
.++....|+||.|+|+.|++...+..|+.||+++|+||||+|.|+|||||||+++|++|||||||||||.|.+||+|+|+
T Consensus 951 ~n~~f~em~SF~EtKadk~v~q~~~~lL~ynr~qlSRVYPkGqRldSsNy~P~pmWn~GsqmVALN~QTgDKpMQmNqa~ 1030 (1267)
T KOG1264|consen 951 ENPDFREMSSFVETKADKIVRQKPVDLLKYNRKQLSRVYPKGQRLDSSNYDPFPMWNCGSQMVALNFQTGDKPMQMNQAL 1030 (1267)
T ss_pred ccHHHHHHhcccchhHHHHHHhccccccccccccceeecCCCcccccCCCCCcccccccceeEEeeccCCCchhhhhHHH
Confidence 01223357899999999999988899999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCceeeeecCCcccCCCCCCCccCCCCC-CC---CceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCC
Q 007734 427 FRANGGCGYVKKPNFLLQTGPHNEVFDPKVK-LP---AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA 502 (591)
Q Consensus 427 F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~-~p---~~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~ 502 (591)
|..||+|||||||.+||.. .|||... .. .+.+|.|+||.|+.|+.. ..+..-|||+|+|.|.+.
T Consensus 1031 F~~ngrcGYvLqPs~Mrte-----~fdP~n~e~~~~l~p~~lsv~vigaRHL~k~-------gr~i~cPfVevEiiGa~~ 1098 (1267)
T KOG1264|consen 1031 FSLNGRCGYVLQPSSMRTE-----KFDPMNPESQRGLLPMTLSVKVLGARHLPKL-------GRSIACPFVEVEIIGAEY 1098 (1267)
T ss_pred hhcCCceeeEecchhcccc-----cCCCCChHHhccccceEEEEEEeeccccccC-------CCCccCCcEEEEEecccc
Confidence 9999999999999999974 5888754 11 135699999999988631 124456899999999999
Q ss_pred CceeeeccccC-CCCCCccC-cEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcceEEEccCCCCCccc
Q 007734 503 DTVMKKTKTLE-DNWIPSWN-EEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYK 580 (591)
Q Consensus 503 d~~k~kTkvi~-nn~NPvWN-Etf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~GyR~vpL~d~~g~~~~ 580 (591)
|..+++|++|. |++||+|| |+|+|.|.+|+.|+|||.|+|+|+.+...||||+++||.+|+.|||.|||+|...+.++
T Consensus 1099 Dt~~~~t~~V~dNGlnPiWn~e~ftFeI~nPe~A~lRF~V~eeDmfs~~~FiaqA~yPv~~ik~GfRsVpLkN~ySEdlE 1178 (1267)
T KOG1264|consen 1099 DTNKFKTTVVNDNGLNPIWNPEKFTFEIYNPEFAFLRFVVYEEDMFSDPNFLAQATYPVKAIKSGFRSVPLKNGYSEDLE 1178 (1267)
T ss_pred CCCceEEEEeccCCCCCCCCCcceEEEeeCCceEEEEEEEecccccCCcceeeeeecchhhhhccceeeecccCchhhhh
Confidence 99988877655 55999999 99999999999999999999999999889999999999999999999999999999999
Q ss_pred CeEEEEEEEE
Q 007734 581 SVKLLMHFEF 590 (591)
Q Consensus 581 ~asLlv~i~f 590 (591)
.|+|||.++.
T Consensus 1179 LaSLLv~i~m 1188 (1267)
T KOG1264|consen 1179 LASLLVFIEM 1188 (1267)
T ss_pred hhhheeeeEe
Confidence 9999999985
No 9
>cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain
Probab=100.00 E-value=5.9e-110 Score=826.68 Aligned_cols=257 Identities=36% Similarity=0.562 Sum_probs=236.8
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+||||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08629 1 YQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPN-QEPIIYHGYTFTSKILFCDVLRAI 79 (258)
T ss_pred CCCCCCchhhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCCccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccccEEEecCCCCchhhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (591)
|+|||++|+|||||||||||+++||.+||+||+++|||+|++++. +....||||++||||||||+|+++
T Consensus 80 ~~~AF~~S~yPvIlsLE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~~k---------- 149 (258)
T cd08629 80 RDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLK---------- 149 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCccccccCCCCHHHHCCCEEEEecccc----------
Confidence 999999999999999999999999999999999999999999774 446799999999999999999752
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCcccccc
Q 007734 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (591)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (591)
+.+++++|+.+..++.++++.....
T Consensus 150 -------------------------------------------------------i~~eLs~l~~y~~~~~f~~~~~~~~ 174 (258)
T cd08629 150 -------------------------------------------------------LVPELSDMIIYCKSVHFGGFSSPGT 174 (258)
T ss_pred -------------------------------------------------------ccHHHHHHHHHhcCCCCCCccchhh
Confidence 1345677777766666666665544
Q ss_pred cCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeeee
Q 007734 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGM 426 (591)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~ 426 (591)
.++..++++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+||
T Consensus 175 ~~~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G~ 254 (258)
T cd08629 175 SGQAFYEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGC 254 (258)
T ss_pred cCCCcceecccCHHHHHHHHHHhHHHHHHhchhccceeCCCCCCCCCCCCCchHHhcCCceEEEecccCCChhHHhhhch
Confidence 34456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeec
Q 007734 427 FRAN 430 (591)
Q Consensus 427 F~~N 430 (591)
|+.|
T Consensus 255 F~~N 258 (258)
T cd08629 255 FQDN 258 (258)
T ss_pred hcCC
Confidence 9987
No 10
>cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=100.00 E-value=6.3e-109 Score=816.40 Aligned_cols=252 Identities=37% Similarity=0.564 Sum_probs=223.0
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (254)
T cd08633 1 NQDMTQPLSHYFITSSHNTYLSGDQLMSQSRVDMYAWVLQAGCRCVEVDCWDGPD-GEPIVHHGYTLTSKILFKDVIETI 79 (254)
T ss_pred CCCcCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999986 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCC--CCCCCCCChhhccccEEEecCCCCchhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS--ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~--~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (591)
|+|||++|+|||||||||||+++||.+||+||+++|||+|+.++. +....||||++||||||||+|++...+.
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPsP~~Lk~KIlik~Kk~~~~Ls----- 154 (254)
T cd08633 80 NKYAFIKNEYPVILSIENHCSVPQQKKMAQYLTEILGDKLDLSSVISNDCTRLPSPEILKGKILVKGKKLSRALS----- 154 (254)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhcCCCCCcCccCCCCCHHHHccCeEEeeccCchhhh-----
Confidence 999999999999999999999999999999999999999998652 3457899999999999999998532211
Q ss_pred hhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCccccc
Q 007734 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (591)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (591)
+|+.+..+..+.++....
T Consensus 155 --------------------------------------------------------------~l~~y~~~~~~~~~~~~~ 172 (254)
T cd08633 155 --------------------------------------------------------------DLVKYTKSVRVHDIETEA 172 (254)
T ss_pred --------------------------------------------------------------HHhhhcccCCcCcccccc
Confidence 111111111111111110
Q ss_pred ccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeee
Q 007734 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (591)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g 425 (591)
...++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|
T Consensus 173 ---~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~lN~g 249 (254)
T cd08633 173 ---TSSWQVSSFSETKAHQILQQKPAQYLRFNQRQLSRIYPSSYRVDSSNYNPQPFWNAGCQMVALNYQSEGRMLQLNRA 249 (254)
T ss_pred ---ccceeeecccHHHHHHHHHHCHHHHHHhhhhcccccCCCCCCCCCCCCCchHHhcCCCeEEEecccCCCchhHhhcc
Confidence 12468899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeec
Q 007734 426 MFRAN 430 (591)
Q Consensus 426 ~F~~N 430 (591)
||+.|
T Consensus 250 ~F~~N 254 (254)
T cd08633 250 KFSAN 254 (254)
T ss_pred cccCC
Confidence 99987
No 11
>cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain wh
Probab=100.00 E-value=1.1e-108 Score=820.18 Aligned_cols=256 Identities=34% Similarity=0.594 Sum_probs=236.2
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08630 1 FQDMSQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVRAFAQGCRCVELDCWEGPG-GEPVIYHGHTLTSKILFRDVIQAV 79 (258)
T ss_pred CCccccchhhheeecccCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCccccceEHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCC--CCCCCChhhccccEEEecCCCCchhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC--LKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (591)
|+|||++|+|||||||||||+++||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+++
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~~Gd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~kk~~--------- 150 (258)
T cd08630 80 RQHAFTASPYPVILSLENHCGLEQQAAMARHLQTILGDMLVTQPLDSLNPEELPSPEELKGRVLVKGKKLQ--------- 150 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcCCCCCHHHHccCEEeeccCcc---------
Confidence 99999999999999999999999999999999999999999977543 5789999999999999999752
Q ss_pred hhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCccccc
Q 007734 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (591)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (591)
+.++|++|+.++.++.++++....
T Consensus 151 --------------------------------------------------------i~~els~L~~y~~~~~~~~~~~~~ 174 (258)
T cd08630 151 --------------------------------------------------------ISPELSALAVYCQATRLRTLEPAP 174 (258)
T ss_pred --------------------------------------------------------chHHHHhhHhhcccccCCCcchhh
Confidence 246688888887776666666543
Q ss_pred ccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeee
Q 007734 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (591)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g 425 (591)
.. ....+++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|
T Consensus 175 ~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~n~~~l~RiYPkgtRidSSNynP~~~W~~G~QmVALN~QT~d~~M~LN~G 253 (258)
T cd08630 175 VQ-PQPCQVSSLSERKAKKLIREAGNSFVRHNARQLTRVYPLGLRMNSANYSPQEMWNSGCQLVALNFQTPGYEMDLNAG 253 (258)
T ss_pred hc-CCCccccccCHHHHHHHHHHhHHHHHHhhhcccceeCCCCCcCCCCCCCcHHHhcCCCeEEEecccCCChhhhhhcc
Confidence 11 23458899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeec
Q 007734 426 MFRAN 430 (591)
Q Consensus 426 ~F~~N 430 (591)
||+.|
T Consensus 254 ~F~~N 258 (258)
T cd08630 254 RFLVN 258 (258)
T ss_pred cccCC
Confidence 99987
No 12
>cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=1.7e-108 Score=818.72 Aligned_cols=254 Identities=33% Similarity=0.527 Sum_probs=224.7
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCC-CCCCceEeeCCcccccchHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRS 186 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv~HG~tlts~i~f~dvi~a 186 (591)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ ++++||||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~ePvV~HG~tlts~i~f~dv~~~ 80 (261)
T cd08624 1 HQDMTQPLNHYFINSSHNTYLTAGQFSGLSSPEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTTEILFKDAIEA 80 (261)
T ss_pred CCCCCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999995 2468999999999999999999999
Q ss_pred HhhhccccCCCceEEeeccCC-CHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChhhccccEEEecCCCCchhh
Q 007734 187 IKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPESLKRRIIISTKPPKEYLE 260 (591)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hc-s~~qQ~~ma~~l~~~~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (591)
|++|||++|+||||||||||| +++||++||+||+++|||+|++++.+. ...||||++||||||||+|+.++
T Consensus 81 I~~~AF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~Kilik~K~~~e--- 157 (261)
T cd08624 81 IAESAFKTSPYPVILSFENHVDSPKQQAKMAEYCRTIFGDMLLTEPLEKYPLKPGVPLPSPEDLRGKILIKNKKYEE--- 157 (261)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCcCCcCCCHHHHhccEEEeeccccc---
Confidence 999999999999999999999 799999999999999999999977432 37899999999999999997421
Q ss_pred hhhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCC
Q 007734 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (591)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 340 (591)
+++|+.+..+..+.+
T Consensus 158 -----------------------------------------------------------------ls~lv~y~~~~kf~~ 172 (261)
T cd08624 158 -----------------------------------------------------------------MSSLVNYIQPTKFVS 172 (261)
T ss_pred -----------------------------------------------------------------chhhhcccCCcCCCC
Confidence 222233332222233
Q ss_pred cccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcce
Q 007734 341 LKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSL 420 (591)
Q Consensus 341 ~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m 420 (591)
+....... ..++++||+|+++.+++++.+.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++|
T Consensus 173 f~~~~~~~-~~~~~~S~sE~k~~~l~~~~~~~fv~~N~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~D~~M 251 (261)
T cd08624 173 FEFSAQKN-RSYVISSFTELKAYDLLSKASVQFVEYNKRQMSRIYPKGTRMDSSNYMPQMFWNVGCQMVALNFQTMDLPM 251 (261)
T ss_pred cccccccC-CcceeecccHHHHHHHHHHhHHHHHHhchhheeeeCCCCCcccCcCCCchHHhcCCCeEEEecccCCChhh
Confidence 33222211 23568999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeeeec
Q 007734 421 WLMHGMFRAN 430 (591)
Q Consensus 421 ~lN~g~F~~N 430 (591)
|||+|||+.|
T Consensus 252 ~LN~G~F~~n 261 (261)
T cd08624 252 QQNMALFEFN 261 (261)
T ss_pred hhhcccccCC
Confidence 9999999987
No 13
>cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=100.00 E-value=1.3e-108 Score=812.36 Aligned_cols=251 Identities=33% Similarity=0.560 Sum_probs=221.7
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++ ++|+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~Tlts~i~f~dv~~aI 79 (253)
T cd08632 1 NQDMDQPLCNYFIASSHNTYLTGDQLLSQSKVDMYARVLQAGCRCVEVDCWDGPD-GEPVVHHGYTLTSKITFRDVIETI 79 (253)
T ss_pred CCcccchhhhhhhccCCCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCCccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCC--CCCCCCCCChhhccccEEEecCCCCchhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG--SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~--~~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (591)
|+|||++|+|||||||||||+++||.+||+||+++|||+|+.|+ .+....||||++||||||||+|++...+
T Consensus 80 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPSP~~Lk~KIlik~K~~~~el------ 153 (253)
T cd08632 80 NKYAFVKNEFPVILSIENHCSIQQQKKIAQYLKEIFGDKLDLSSVLTGDPKQLPSPQLLKGKILVKGKKLCRDL------ 153 (253)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcccCCCHHHhcCcEEEeccCCcHHH------
Confidence 99999999999999999999999999999999999999998765 2346789999999999999999853211
Q ss_pred hhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCccccc
Q 007734 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (591)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (591)
++|+.+..+..+.++.+.
T Consensus 154 -------------------------------------------------------------s~l~~~~~~~~~~~~~~~- 171 (253)
T cd08632 154 -------------------------------------------------------------SDLVVYTNSVAAQDIVDD- 171 (253)
T ss_pred -------------------------------------------------------------HhhhhhccCcccccchhc-
Confidence 111111111111111110
Q ss_pred ccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeee
Q 007734 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (591)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g 425 (591)
....+++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|
T Consensus 172 ---~~~~~~~SlsE~~~~~l~~~~~~~~v~~n~~~l~RvYP~g~RidSSNy~P~~~W~~G~QmVAlN~Qt~d~~m~LN~g 248 (253)
T cd08632 172 ---GSTGNVLSFSETRAHQLVQQKAEQFMTYNQKQLTRIYPSAYRIDSSNFNPLPYWNVGCQLVALNYQSEGRMMQLNRA 248 (253)
T ss_pred ---CCcccccccCHHHHHHHHHHhHHHHHHHhhhccceeCCCCCcCcCCCCCcHHHhcCCCeEEEecccCCChhHHhhcc
Confidence 11257899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeec
Q 007734 426 MFRAN 430 (591)
Q Consensus 426 ~F~~N 430 (591)
||+.|
T Consensus 249 ~F~~n 253 (253)
T cd08632 249 KFMVN 253 (253)
T ss_pred cccCC
Confidence 99987
No 14
>cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta. This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y)
Probab=100.00 E-value=2.2e-108 Score=816.38 Aligned_cols=255 Identities=35% Similarity=0.548 Sum_probs=227.2
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+|+||+|||++|+|+|||+||
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~ep~v~HG~tlt~~i~f~~v~~~I 79 (257)
T cd08595 1 YQDMDHPLSDYFISSSHNTYLVSDQLVGPSDLDGYVSALRKGCRCLEIDCWDGAD-NEPVVYHGYTLTSKILFKEVITTV 79 (257)
T ss_pred CCCCCCchhhheeeccccccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEecCCCcccccCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCC--CCCCCChhhccccEEEecCCCCchhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC--LKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (591)
|+|||++|+|||||||||||+++||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+..
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~lgd~L~~~~~~~~~~~~lpsP~~Lk~KIlik~K~ki--------- 150 (257)
T cd08595 80 EKYAFEKSDYPVVLSLENHCSTEQQEIMAHYLVSILGEKLLRAPIDDPATGELPSPEALKFKILVKNKKKI--------- 150 (257)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCCCcCCcCcCCCHHHHcCCEEEEecccc---------
Confidence 99999999999999999999999999999999999999999977543 4799999999999999998620
Q ss_pred hhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCccccc
Q 007734 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (591)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (591)
++++++|+.+..+..+.++....
T Consensus 151 ---------------------------------------------------------~~els~L~~y~~~~~~~~~~~~~ 173 (257)
T cd08595 151 ---------------------------------------------------------AKALSDLVIYTKSEKFCSFTHSR 173 (257)
T ss_pred ---------------------------------------------------------ChhHHHHhhhcCCcCCCCccccc
Confidence 12344555444333222333221
Q ss_pred ccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeee
Q 007734 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (591)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g 425 (591)
.. ...++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|
T Consensus 174 ~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~n~r~l~RvYP~GtRidSSNynP~~~W~~G~QmVALN~Qt~d~~M~LN~G 252 (257)
T cd08595 174 DN-QHSYENNSIGENKARKLLKSSGADFVGHTQRFITRIYPKGTRASSSNYNPQEFWNVGCQMVALNFQTLGAPMDLQNG 252 (257)
T ss_pred cc-cccceecccCHHHHHHHHHHhHHHHHHHhhcCCceeCcCCCCCCCCCCCcHHHHcCCCeEEEecccCCChhhhhhcC
Confidence 11 12357899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeec
Q 007734 426 MFRAN 430 (591)
Q Consensus 426 ~F~~N 430 (591)
||+.|
T Consensus 253 ~F~~N 257 (257)
T cd08595 253 KFLDN 257 (257)
T ss_pred cccCC
Confidence 99987
No 15
>cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which
Probab=100.00 E-value=2.2e-108 Score=816.74 Aligned_cols=256 Identities=34% Similarity=0.585 Sum_probs=229.9
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08631 1 YQDMTQPLCHYFICSSHNTYLMEDQLRGQSSVEGYIRALKRGCRCVEVDVWDGPN-GEPIVYHGHTFTSKILFKDVVAAV 79 (258)
T ss_pred CCcCCcchhhheeecCCCccccCCcccCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCcccCCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCC--CCCCCChhhccccEEEecCCCCchhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC--LKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (591)
|+|||++|+|||||||||||+++||.+||+||+++|||+|++++.+. ...||||++||||||||+|+++
T Consensus 80 k~~AF~~s~yPvIlslE~Hc~~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~Kk~~--------- 150 (258)
T cd08631 80 AQYAFQVSDYPVILSLENHCGVEQQQTMAQHLTEILGEKLLSTTLDGVLPTQLPSPEELRGKILLKGKKIR--------- 150 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCHHHHhcceEeeecccc---------
Confidence 99999999999999999999999999999999999999999977543 4799999999999999999751
Q ss_pred hhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCccccc
Q 007734 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (591)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (591)
+.+++++|+.+..+..+.++...-
T Consensus 151 --------------------------------------------------------~~~eLs~L~~y~~~~~f~~~~~~~ 174 (258)
T cd08631 151 --------------------------------------------------------LSPELSDCVIYCKSVSFRSFTHSR 174 (258)
T ss_pred --------------------------------------------------------ccHHHHHhHhhhcccccCCccccc
Confidence 124455665554444333333221
Q ss_pred ccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeee
Q 007734 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (591)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g 425 (591)
. ....++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|
T Consensus 175 ~-~~~~~~~~SlsE~~~~~l~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G 253 (258)
T cd08631 175 E-HYHFYEISSFTETKARKLIREAGNEFVQHNTWQLSRVYPSGLRTDSSNYNPQEMWNAGCQMVALNFQTAGLEMDLNDG 253 (258)
T ss_pred c-cCccceecccCHHHHHHHHHhchHHHHHHHHhcCceeCcCCCCCCCCCCCcHHHHhCCCeEeeecccCCChhHHhhcc
Confidence 1 112357899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeec
Q 007734 426 MFRAN 430 (591)
Q Consensus 426 ~F~~N 430 (591)
||+.|
T Consensus 254 ~F~~N 258 (258)
T cd08631 254 LFRQN 258 (258)
T ss_pred hhcCC
Confidence 99987
No 16
>cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core
Probab=100.00 E-value=5.6e-108 Score=812.13 Aligned_cols=248 Identities=36% Similarity=0.563 Sum_probs=224.0
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
.|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|||||||||||+|+|+|||+||
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdG~~-~eP~V~HG~tlts~i~f~dv~~~I 79 (254)
T cd08596 1 EEDLQYPLSYYYIESSHNTYLTGHQLKGESSVELYSQVLLTGCRCVELDCWDGDD-GMPIIYHGHTLTTKIPFKDVVEAI 79 (254)
T ss_pred CCccccchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCC---C--CCCCCCChhhccccEEEecCCCCchhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS---E--CLKEFPSPESLKRRIIISTKPPKEYLEAK 262 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~---~--~~~~lPSP~~Lk~KIlik~K~~~~~~~~~ 262 (591)
++|||++|+||||||||||||.+||.+||+||+++|||+|++++. + ....||||++||||||||+|+++
T Consensus 80 ~~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~l~~~~~~~~~~lPsP~~Lk~KIlik~K~~~------ 153 (254)
T cd08596 80 NRSAFITSDYPVILSIENHCSLQQQRKMAEIFKTVFGEKLVTKFLFESDFSDDPSLPSPLQLKNKILLKNKKAP------ 153 (254)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhccCCcccccccccCCCCCHHHHhhcceecccCcH------
Confidence 999999999999999999999999999999999999999998652 1 24689999999999999999732
Q ss_pred hhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEe-ecccccCCc
Q 007734 263 EEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAI-HAGKPKGGL 341 (591)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~ 341 (591)
++++|+.+ ++.+++ ++
T Consensus 154 --------------------------------------------------------------els~l~~y~~~~k~~-~~ 170 (254)
T cd08596 154 --------------------------------------------------------------ELSDLVIYCQAVKFP-GL 170 (254)
T ss_pred --------------------------------------------------------------HHHHHHHHhcCccCC-CC
Confidence 13333333 233332 33
Q ss_pred ccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCccee
Q 007734 342 KECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLW 421 (591)
Q Consensus 342 ~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~ 421 (591)
. .+..++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||
T Consensus 171 ~-----~~~~~~~~S~sE~~~~~~~~~~~~~lv~~n~~~l~RiYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~ 245 (254)
T cd08596 171 S-----TPKCYHISSLNENAAKRLCRRYPQKLVQHTRCQLLRTYPAATRIDSSNPNPLIFWLHGLQLVALNYQTDDLPMH 245 (254)
T ss_pred C-----ccccceecccCHHHHHHHHHHCHHHHHHhhhhcceeeccCCCcCCCCCCCcHHHHhCCCeEEeecccCCChHHH
Confidence 2 13357889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeeec
Q 007734 422 LMHGMFRAN 430 (591)
Q Consensus 422 lN~g~F~~N 430 (591)
||+|||+.|
T Consensus 246 LN~G~F~~N 254 (254)
T cd08596 246 LNAAMFEAN 254 (254)
T ss_pred hhhchhcCC
Confidence 999999987
No 17
>cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=1.3e-107 Score=810.89 Aligned_cols=251 Identities=34% Similarity=0.541 Sum_probs=220.4
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCC-CCCCceEeeCCcccccchHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRS 186 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv~HG~tlts~i~f~dvi~a 186 (591)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ ++++|+||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~eP~V~HG~tlts~i~f~dv~~a 80 (257)
T cd08626 1 YQDMDQPLAHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCIELDCWDGKGEDQEPIITHGKAMCTDILFKDVIQA 80 (257)
T ss_pred CCcccchhhhheeecCcCccccCCcccCCccHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCCccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999996 2468999999999999999999999
Q ss_pred HhhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChhhccccEEEecCCCCchhhh
Q 007734 187 IKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPESLKRRIIISTKPPKEYLEA 261 (591)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~~ 261 (591)
|++|||++|+||||||||||||++||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+..+.
T Consensus 81 I~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~KIlik~K~Ls~L--- 157 (257)
T cd08626 81 IKDTAFVTSDYPVILSFENHCSKPQQYKLAKYCEEIFGDLLLTKPLESHPLEPGVPLPSPNKLKRKILIKNKRLSSL--- 157 (257)
T ss_pred HHHHhcccCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHhhcCCCccccccccCCCCCCHHHHhcCeeecccchhhh---
Confidence 999999999999999999999999999999999999999999976432 468999999999999999973110
Q ss_pred hhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCc
Q 007734 262 KEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL 341 (591)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 341 (591)
+.+..+..+.++
T Consensus 158 --------------------------------------------------------------------~~y~~~~~~~~~ 169 (257)
T cd08626 158 --------------------------------------------------------------------VNYAQPVKFQGF 169 (257)
T ss_pred --------------------------------------------------------------------hcccccCCCCCc
Confidence 000000000111
Q ss_pred ccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCccee
Q 007734 342 KECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLW 421 (591)
Q Consensus 342 ~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~ 421 (591)
....+.. ..++++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||
T Consensus 170 ~~~~~~~-~~~~~~S~sE~k~~~~~~~~~~~~v~~n~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~ 248 (257)
T cd08626 170 DVAEERN-IHFNMSSFNESVGLGYLKTSAIEFVNYNKRQMSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQTPDLGMQ 248 (257)
T ss_pred CchhhcC-CCccccccCHHHHHHHHHHHHHHHHHHhhhcCceeCcCCCCCcCCCCCcHHHhcCCCeEEEecccCCChhHH
Confidence 1111111 135789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeeec
Q 007734 422 LMHGMFRAN 430 (591)
Q Consensus 422 lN~g~F~~N 430 (591)
||+|||+.|
T Consensus 249 LN~G~F~~n 257 (257)
T cd08626 249 LNQGKFEYN 257 (257)
T ss_pred hhhccccCC
Confidence 999999987
No 18
>cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=2.6e-107 Score=809.05 Aligned_cols=251 Identities=33% Similarity=0.526 Sum_probs=221.5
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCC-CCCceEeeCCcccccchHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK-KDNVDVLHGGTMTAPVELIKCLRS 186 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~-~~~piv~HG~tlts~i~f~dvi~a 186 (591)
.|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ +++||||||||||++|+|+|||+|
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~wdG~~~~~ePiV~HG~tlts~i~f~dv~~~ 80 (258)
T cd08623 1 NEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEA 80 (258)
T ss_pred CCCcCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEeeCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999974 368999999999999999999999
Q ss_pred HhhhccccCCCceEEeeccCC-CHHHHHHHHHHHHHHhhccccCCCCC-----CCCCCCChhhccccEEEecCCCCchhh
Q 007734 187 IKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLE 260 (591)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hc-s~~qQ~~ma~~l~~~~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (591)
||+|||++|+||||||||||| +++||.+||+||+++|||+|++++.+ ....||||++||||||||+|+..+
T Consensus 81 I~~~AF~~S~yPvIlSlE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lpSP~~Lk~KIlik~KkLs~--- 157 (258)
T cd08623 81 IAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDALLMEPLEKYPLESGVPLPSPMDLMYKILVKNKKMSN--- 157 (258)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhccCCccccccccCCcCCCHHHHhhhhheeccchhc---
Confidence 999999999999999999999 59999999999999999999997743 246899999999999999997311
Q ss_pred hhhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCC
Q 007734 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (591)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 340 (591)
|+.|..+..+.+
T Consensus 158 --------------------------------------------------------------------Lv~y~~~v~f~~ 169 (258)
T cd08623 158 --------------------------------------------------------------------LVNYIQPVKFES 169 (258)
T ss_pred --------------------------------------------------------------------ccccccCcccCC
Confidence 111111111122
Q ss_pred cccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcce
Q 007734 341 LKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSL 420 (591)
Q Consensus 341 ~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m 420 (591)
+..... ....++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||++||++|||||||||||+|++|
T Consensus 170 f~~~~~-~~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~QT~d~~M 248 (258)
T cd08623 170 FEASKK-RNKSFEMSSFVETKGLEQLTKSPVEFVEYNKMQLSRIYPKGTRVDSSNYMPQLFWNAGCQMVALNFQTVDLSM 248 (258)
T ss_pred cccccc-cCCCccccCccHHHHHHHHHhCHHHHHHHhhhhceeeccCCCcccCCCCCChhhhcCCceEEEeecCCCCcch
Confidence 222111 1123578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeeeec
Q 007734 421 WLMHGMFRAN 430 (591)
Q Consensus 421 ~lN~g~F~~N 430 (591)
|||+|||+.|
T Consensus 249 ~LN~G~F~~~ 258 (258)
T cd08623 249 QINMGMYEYN 258 (258)
T ss_pred hhhcccccCC
Confidence 9999999987
No 19
>cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homod
Probab=100.00 E-value=5.3e-107 Score=806.45 Aligned_cols=251 Identities=36% Similarity=0.548 Sum_probs=221.4
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCC-CCceEeeCCcccccchHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKK-DNVDVLHGGTMTAPVELIKCLRS 186 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~-~~piv~HG~tlts~i~f~dvi~a 186 (591)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+++ ++|+||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~eP~V~HG~tlts~i~f~~v~~a 80 (257)
T cd08591 1 YQDMDQPLSHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLSGCRCIELDCWDGKGEDEEPIITHGKTMCTEILFKDVIEA 80 (257)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCCCCCCCEEeeCCCCccCeEHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999853 68999999999999999999999
Q ss_pred HhhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChhhccccEEEecCCCCchhhh
Q 007734 187 IKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPESLKRRIIISTKPPKEYLEA 261 (591)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~~ 261 (591)
||+|||++|+||||||||||||++||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+..+.
T Consensus 81 Ik~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~~~~~~~~~~~~~lPSP~~Lk~KIlik~K~ls~L--- 157 (257)
T cd08591 81 IAETAFKTSEYPVILSFENHCSSKQQAKMAEYCREIFGDLLLTEPLEKYPLEPGVPLPSPNDLKRKILIKNKKLSSL--- 157 (257)
T ss_pred HHHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCCCCHHHHhcceeeecccchhh---
Confidence 999999999999999999999999999999999999999999987432 368999999999999999973210
Q ss_pred hhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCc
Q 007734 262 KEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL 341 (591)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 341 (591)
+++..+..+.++
T Consensus 158 --------------------------------------------------------------------~~y~~~~~f~~~ 169 (257)
T cd08591 158 --------------------------------------------------------------------VNYIQPVKFQGF 169 (257)
T ss_pred --------------------------------------------------------------------hccccCCCCCCc
Confidence 000000000111
Q ss_pred ccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCccee
Q 007734 342 KECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLW 421 (591)
Q Consensus 342 ~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~ 421 (591)
...... ...++++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||
T Consensus 170 ~~~~~~-~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~ 248 (257)
T cd08591 170 EVAEKR-NKHYEMSSFNESKGLGYLKKSPIEFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVALNFQTPDLPMQ 248 (257)
T ss_pred cchhhc-CCcceecccCHHHHHHHHHHHHHHHHHHhhhcCceeCcCCCcCcCCCCCcHHHhcCCCeEEEecCcCCChhHH
Confidence 111111 1235789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeeec
Q 007734 422 LMHGMFRAN 430 (591)
Q Consensus 422 lN~g~F~~N 430 (591)
||+|||+.|
T Consensus 249 lN~g~F~~N 257 (257)
T cd08591 249 LNQGKFEYN 257 (257)
T ss_pred hhcccccCC
Confidence 999999987
No 20
>cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is
Probab=100.00 E-value=5.6e-107 Score=809.79 Aligned_cols=256 Identities=38% Similarity=0.607 Sum_probs=231.1
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+|+||+|||++|+|+|||+||
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~v~HG~t~t~~i~f~~v~~~I 79 (257)
T cd08593 1 YQDMTQPLSHYFIASSHNTYLLEDQLKGPSSTEAYIRALKKGCRCVELDCWDGPD-GEPIIYHGHTLTSKILFKDVIQAI 79 (257)
T ss_pred CCcCCcchhhheeecccCccccCCcccCCccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCccccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccccEEEecCCCCchhhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (591)
|+|||++|+||||||||||||++||.+||+||+++|||+|+.++.+ ....||||++||||||||+|+++
T Consensus 80 ~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~~p~~~~~~~lpsP~~Lk~Kilik~k~~~---------- 149 (257)
T cd08593 80 REYAFKVSPYPVILSLENHCSVEQQKVMAQHLKSILGDKLLTQPLDGVLTALPSPEELKGKILVKGKKLK---------- 149 (257)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCccccCCCCCCHHHHCCCEEEEecccc----------
Confidence 9999999999999999999999999999999999999999997743 35799999999999999999751
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCcccccc
Q 007734 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (591)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (591)
+.+++++|+.+..+..+.++.+...
T Consensus 150 -------------------------------------------------------i~~els~L~~~~~~~k~~~~~~~~~ 174 (257)
T cd08593 150 -------------------------------------------------------LAKELSDLVIYCKSVHFKSFEHSKE 174 (257)
T ss_pred -------------------------------------------------------ccHHHHhhhhhcccccCCChhhhcc
Confidence 1244566665543333444544332
Q ss_pred cCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeeee
Q 007734 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGM 426 (591)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~ 426 (591)
.....+++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+||
T Consensus 175 -~~~~~~~~SlsE~k~~~~~~~~~~~lv~~n~~~l~RvYP~g~RidSSNynP~~~W~~G~QmVALN~Qt~D~~m~LN~G~ 253 (257)
T cd08593 175 -NYHFYEMSSFSESKALKLAQESGNEFVRHNKRQLSRIYPAGLRTDSSNYDPQEMWNVGCQIVALNFQTPGEEMDLNDGL 253 (257)
T ss_pred -cCCCceeecCCHHHHHHHHHHhHHHHHHhhhhccceeCCCCCcCCCCCCCcHHHHhCCCeEeeecccCCChHHHhhhch
Confidence 2345689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeec
Q 007734 427 FRAN 430 (591)
Q Consensus 427 F~~N 430 (591)
|+.|
T Consensus 254 F~~N 257 (257)
T cd08593 254 FRQN 257 (257)
T ss_pred hcCC
Confidence 9987
No 21
>cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=9.6e-107 Score=809.61 Aligned_cols=251 Identities=33% Similarity=0.514 Sum_probs=222.1
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCC-CCCceEeeCCcccccchHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK-KDNVDVLHGGTMTAPVELIKCLRS 186 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~-~~~piv~HG~tlts~i~f~dvi~a 186 (591)
.|||++|||||||||||||||+|+||.|+||+|||++||++||||||||||||++ +++|+||||||||++|+|+|||+|
T Consensus 1 ~~Dm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~eP~v~Hg~t~t~~i~f~dv~~~ 80 (258)
T cd08625 1 SDDMNQPLSHYFINSSHNTYLTAGQLTGLSSVEMYRQVLLTGCRCIELDCWKGRPPEEEPFITHGFTMTTEIPFKDVIEA 80 (258)
T ss_pred CCccCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEecCCCCCCCCCEEeeCCccccCcCHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999953 468999999999999999999999
Q ss_pred HhhhccccCCCceEEeeccCC-CHHHHHHHHHHHHHHhhccccCCCCC-----CCCCCCChhhccccEEEecCCCCchhh
Q 007734 187 IKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLE 260 (591)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hc-s~~qQ~~ma~~l~~~~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (591)
||+|||++|+||||||||||| |.+||++||++|++||||+|++++.+ ....||||++||||||||+|+..+
T Consensus 81 I~~~aF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~ilGd~L~~~~~d~~~~~~~~~lpsP~~Lk~KILIK~KklSd--- 157 (258)
T cd08625 81 IAESAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLIDPLDKYPLVPGVQLPSPQELMGKILVKNKKMST--- 157 (258)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHHHHhcCCcccccccccccCCCCHHHHhhceeeeeeeccc---
Confidence 999999999999999999999 69999999999999999999997744 246899999999999999997421
Q ss_pred hhhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCC
Q 007734 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (591)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 340 (591)
|+.|..+..+.+
T Consensus 158 --------------------------------------------------------------------Lvvy~~~vkf~~ 169 (258)
T cd08625 158 --------------------------------------------------------------------LVNYIEPVKFKS 169 (258)
T ss_pred --------------------------------------------------------------------ccceecccccCC
Confidence 111111111122
Q ss_pred cccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcce
Q 007734 341 LKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSL 420 (591)
Q Consensus 341 ~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m 420 (591)
+.+.... ...++|+||+|+++.+++++.+.+|++||++||+||||+|+|||||||||++||++|||||||||||+|++|
T Consensus 170 f~~~~~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNydP~~~W~~G~QmVALN~QT~D~~M 248 (258)
T cd08625 170 FEAAAKR-NKFFEMSSFVETKAMEQLTKSPMEFVEYNKKQLSRIYPKGTRVDSSNYMPQLFWNVGCQMVALNFQTLDLAM 248 (258)
T ss_pred chhhhcc-CCcceecCccHHHHHHHHHhCHHHHHHhhhcceeeeccCCCcCcCCCCCChhHhcCcceEEEeecCCCCcch
Confidence 2222111 124578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeeeec
Q 007734 421 WLMHGMFRAN 430 (591)
Q Consensus 421 ~lN~g~F~~N 430 (591)
|||+|||+.|
T Consensus 249 ~LN~G~F~~n 258 (258)
T cd08625 249 QLNMGVFEYN 258 (258)
T ss_pred hhhcccccCC
Confidence 9999999987
No 22
>cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif,
Probab=100.00 E-value=4.7e-106 Score=785.19 Aligned_cols=225 Identities=41% Similarity=0.659 Sum_probs=215.4
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
||||++||+||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|||||||||||+|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~Y~~aL~~GcRcvElD~wdg~~-~ePvV~HG~tlts~i~f~dv~~aI 79 (227)
T cd08594 1 NQDMTQPLSHYFIASSHNTYLTGDQLLSQSRVDMYARVLQAGCRCVEVDCWDGPD-GEPVVHHGYTLTSKILFRDVIETI 79 (227)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCC--CCCCCCCCChhhccccEEEecCCCCchhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG--SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~--~~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (591)
|+|||++|+|||||||||||+++||.+||+||+++|||+|++++ .+....||||++||||||||+|+
T Consensus 80 ~~~AF~~s~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~K~----------- 148 (227)
T cd08594 80 NKYAFIKNEYPVILSIENHCSVQQQKKMAQYLKEILGDKLDLSSVISGDSKQLPSPQSLKGKILIKGKK----------- 148 (227)
T ss_pred HHhhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHHhccCCCCccccCCCCCHHHHccCEeccCCc-----------
Confidence 99999999999999999999999999999999999999999864 33468999999999999999751
Q ss_pred hhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCccccc
Q 007734 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (591)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (591)
T Consensus 149 -------------------------------------------------------------------------------- 148 (227)
T cd08594 149 -------------------------------------------------------------------------------- 148 (227)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeee
Q 007734 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (591)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g 425 (591)
++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|
T Consensus 149 ------~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~g 222 (227)
T cd08594 149 ------WQVSSFSETRAHQIVQQKAAQFLRFNQRQLSRIYPSAYRIDSSNFNPQPYWNAGCQLVALNYQTEGRMLQLNRA 222 (227)
T ss_pred ------ceeccccHHHHHHHHHHHHHHHHHhcccccceeCCCCCcCcCCCCCchHHhcCCceEEEecccCCChhhHhhcc
Confidence 25689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeec
Q 007734 426 MFRAN 430 (591)
Q Consensus 426 ~F~~N 430 (591)
||+.|
T Consensus 223 ~F~~N 227 (227)
T cd08594 223 KFRAN 227 (227)
T ss_pred cccCC
Confidence 99987
No 23
>cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=100.00 E-value=3.9e-106 Score=800.16 Aligned_cols=253 Identities=36% Similarity=0.603 Sum_probs=226.8
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
.|||++||+||||+|||||||+|+||.|+||+|+|++||++||||||||||||++ ++|+||||||+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~t~ts~i~f~dv~~~I 79 (254)
T cd08628 1 PQDMNNPLSHYWISSSHNTYLTGDQLRSESSTEAYIRCLRMGCRCIELDCWDGPD-GKPIIYHGWTRTTKIKFDDVVQAI 79 (254)
T ss_pred CCcccchHHhhheecCcCCcccCCeeecCCCHHHHHHHHHcCCcEEEEEeecCCC-CCeEEeeCCCccCCcCHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999976 479999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccccEEEecCCCCchhhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (591)
++|||++|+|||||||||||+++||.+||+||+++|||+|+.++. +....||||++||||||||+|+..
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lpsp~~Lk~Kilik~k~~~---------- 149 (254)
T cd08628 80 KDHAFVTSEYPVILSIEEHCSVEQQRHMAKVFKEVFGDKLLMKPLEASADQLPSPTQLKEKIIIKHKKLI---------- 149 (254)
T ss_pred HHHhccCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHHhcCCCCccccccCCCHHHHcCCeEeeccCcC----------
Confidence 999999999999999999999999999999999999999998664 346799999999999999998741
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCcccccc
Q 007734 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (591)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (591)
++++++|+.|..+..+. .. .+.
T Consensus 150 --------------------------------------------------------~~eLs~l~~y~~~~~~~-~~-~~~ 171 (254)
T cd08628 150 --------------------------------------------------------AIELSDLVVYCKPTSKT-KD-NLE 171 (254)
T ss_pred --------------------------------------------------------CHHHHhhHhhhcccccc-cC-Ccc
Confidence 24455666655433211 01 011
Q ss_pred cCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeeee
Q 007734 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGM 426 (591)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~ 426 (591)
++...+++||+|+++.+++++.+.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+||
T Consensus 172 -~~~~~~~~S~sE~k~~~~~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~d~~M~LN~G~ 250 (254)
T cd08628 172 -NPDFKEIRSFVETKAPSIIRQKPVQLLKYNRKGLTRVYPKGQRVDSSNYDPFRLWLCGSQMVALNFQTADKYMQLNHAL 250 (254)
T ss_pred -cccccccccccHHHHHHHHHhHHHHHHHHhHhhhhhhCCCCCcCCCCCCCchHHhcCCCeEEEeeccCCChhhhhhhhh
Confidence 1234478999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeec
Q 007734 427 FRAN 430 (591)
Q Consensus 427 F~~N 430 (591)
|+.|
T Consensus 251 F~~n 254 (254)
T cd08628 251 FSLN 254 (254)
T ss_pred ccCC
Confidence 9987
No 24
>cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein. This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiment
Probab=100.00 E-value=4.1e-104 Score=790.39 Aligned_cols=259 Identities=35% Similarity=0.563 Sum_probs=233.2
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
+|||++||+||||+|||||||+|+||.|+||+++|++||++||||||||||||++ ++|+|+||+|+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcR~vElD~w~g~~-gepvV~Hg~tlts~i~f~dv~~~I 79 (260)
T cd08597 1 CQDMTQPLSHYFIASSHNTYLIEDQLRGPSSVEGYVRALQRGCRCVELDCWDGPN-GEPVIYHGHTLTSKISFRSVIEAI 79 (260)
T ss_pred CCcccchHHhhhhccccCccccCCeecCccCHHHHHHHHHhCCCEEEEEeEcCCC-CCEEEEeCCccccceEHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccccEEEecCCCCchhhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (591)
|+|||++|+|||||||||||+.+||.+||+||+++|||+|+.++. +....||||++||||||||+|+++..
T Consensus 80 ~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~Kilik~k~~~~~-------- 151 (260)
T cd08597 80 NEYAFVASEYPLILCIENHCSEKQQLVMAQYLKEIFGDKLYTEPPNEGESYLPSPHDLKGKIIIKGKKLKRR-------- 151 (260)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCHHHHCCCEEEEecCCCcc--------
Confidence 999999999999999999999999999999999999999999774 34679999999999999999975210
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCcccccc
Q 007734 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (591)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (591)
++.+++++|+.|..+..+.++.....
T Consensus 152 ------------------------------------------------------~~~~els~l~~~~~~~~~~~~~~~~~ 177 (260)
T cd08597 152 ------------------------------------------------------KLCKELSDLVSLCKSVRFQDFPTSAQ 177 (260)
T ss_pred ------------------------------------------------------cccHHHHhhhhhhcCcccCCcccccc
Confidence 12456777777655443334433211
Q ss_pred cCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeeee
Q 007734 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGM 426 (591)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~ 426 (591)
....++++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+||
T Consensus 178 -~~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~M~lN~g~ 256 (260)
T cd08597 178 -NQKYWEVCSFSENLARRLANEFPEDFVNYNKKFLSRVYPSPMRVDSSNYNPQDFWNCGCQIVAMNYQTPGLMMDLNTGK 256 (260)
T ss_pred -ccCcccccccCHHHHHHHHHHCHHHHHHHhhhcCceeCcCCCCCCCCCCCchHHhcCCCeEeeecccCCChhhhhhccc
Confidence 2234678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeec
Q 007734 427 FRAN 430 (591)
Q Consensus 427 F~~N 430 (591)
|+.|
T Consensus 257 F~~N 260 (260)
T cd08597 257 FLEN 260 (260)
T ss_pred ccCC
Confidence 9987
No 25
>cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins. This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein ki
Probab=100.00 E-value=2.1e-103 Score=769.43 Aligned_cols=225 Identities=42% Similarity=0.697 Sum_probs=216.3
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
+|||++|||||||+|||||||+||||.|+||+|+|++||++||||||||||||++ ++|+||||+|+|++|+|+|||+||
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~Ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~v~HG~t~ts~i~f~dv~~~I 79 (226)
T cd08558 1 YQDMTQPLSHYFISSSHNTYLTGDQLTGESSVEAYIRALLRGCRCVELDCWDGPD-GEPVVYHGHTLTSKILFKDVIEAI 79 (226)
T ss_pred CCcCCccHHHhhhcccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCeEEeeCCCCccceEHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999976 589999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-CCCCCChhhccccEEEecCCCCchhhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-LKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~-~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (591)
|+|||++|+|||||||||||+.+||.+||++|+++|||+|++++.+. ...||||++||||||||+|+
T Consensus 80 k~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~------------ 147 (226)
T cd08558 80 KEYAFVTSPYPVILSLENHCSLEQQKKMAQILKEIFGDKLLTPPLDENPVQLPSPEQLKGKILIKGKK------------ 147 (226)
T ss_pred HHHhcccCCCCeEEEEecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCCCCCChHHhCCCEEEEccC------------
Confidence 99999999999999999999999999999999999999999988654 48999999999999999761
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCcccccc
Q 007734 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (591)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (591)
T Consensus 148 -------------------------------------------------------------------------------- 147 (226)
T cd08558 148 -------------------------------------------------------------------------------- 147 (226)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeeee
Q 007734 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGM 426 (591)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~ 426 (591)
.+++||+|+++.+++++++.+|++||++||+||||+|+|||||||||++||++|||||||||||+|++||||+||
T Consensus 148 -----~~~~S~sE~~~~~~~~~~~~~l~~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~g~ 222 (226)
T cd08558 148 -----YHMSSFSETKALKLLKESPEEFVKYNKRQLSRVYPKGTRVDSSNYNPQPFWNAGCQMVALNYQTPDLPMQLNQGK 222 (226)
T ss_pred -----ceEeecCHHHHHHHHHHChHHHHHhcccceeEECcCCCcCCCCCCCcHHHHhCCCeEeeecccCCChhhhhhccc
Confidence 256899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeec
Q 007734 427 FRAN 430 (591)
Q Consensus 427 F~~N 430 (591)
|+.|
T Consensus 223 F~~n 226 (226)
T cd08558 223 FEQN 226 (226)
T ss_pred ccCC
Confidence 9976
No 26
>cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes fro
Probab=100.00 E-value=6.3e-103 Score=768.42 Aligned_cols=229 Identities=38% Similarity=0.648 Sum_probs=215.8
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
.|||++|||||||+|||||||+||||.|+||+|+|++||++||||||||||||++ ++|+||||||+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~ep~V~HG~t~ts~i~f~dv~~~I 79 (231)
T cd08598 1 EEDLSRPLNEYFISSSHNTYLLGRQLAGDSSVEGYIRALQRGCRCVEIDVWDGDD-GEPVVTHGYTLTSSVPFRDVCRAI 79 (231)
T ss_pred CCccccchHhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCCcCceEHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999975 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccccEEEecCCCCchhhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (591)
|+|||++|+|||||||||||+.+||.+||+||+++|||+|++++.+ ....||||++||||||||+|+. .
T Consensus 80 k~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~KIlik~K~~-----~----- 149 (231)
T cd08598 80 KKYAFVTSPYPLILSLEVHCDAEQQERMVEIMKETFGDLLVTEPLDGLEDELPSPEELRGKILIKVKKE-----S----- 149 (231)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCCHHHHCCCEEEEeccc-----C-----
Confidence 9999999999999999999999999999999999999999998753 3578999999999999998850 0
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCcccccc
Q 007734 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (591)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (591)
+
T Consensus 150 ---------------------------------------------------------~---------------------- 150 (231)
T cd08598 150 ---------------------------------------------------------K---------------------- 150 (231)
T ss_pred ---------------------------------------------------------C----------------------
Confidence 0
Q ss_pred cCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeeee
Q 007734 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGM 426 (591)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g~ 426 (591)
...+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+||
T Consensus 151 ---~~~~~~S~sE~~~~~l~~~~~~~lv~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~G~ 227 (231)
T cd08598 151 ---TPNHIFSLSERSLLKLLKDKRAALDKHNRRHLMRVYPSGTRISSSNFNPLPFWRAGVQMVALNWQTYDLGMQLNEAM 227 (231)
T ss_pred ---CCceeeccCHHHHHHHHHHHHHHHHHHhhhceeeeCCCCCcCCCCCCCcHHHHhCCCeEEEecccCCChhhhhhccc
Confidence 01257899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eee
Q 007734 427 FRA 429 (591)
Q Consensus 427 F~~ 429 (591)
|+.
T Consensus 228 F~~ 230 (231)
T cd08598 228 FAG 230 (231)
T ss_pred ccC
Confidence 985
No 27
>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=100.00 E-value=8e-103 Score=762.20 Aligned_cols=226 Identities=38% Similarity=0.656 Sum_probs=211.0
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
.+||++|||||||||||||||+||||.|+||+++|++||++||||||||||||++ ++|||+||+|+|++|+|+|||+||
T Consensus 1 ~~DM~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcR~vElD~wdg~d-gePvV~Hg~tlts~i~f~dv~~~I 79 (229)
T cd08627 1 PEEMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPD-GMPVIYHGHTLTTKIKFSDVLHTI 79 (229)
T ss_pred CccccchhhhheeecCcCccccCCccCCcccHHHHHHHHHhCCCEEEEEeecCCC-CCEEEEeCCcCCCceEHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999987 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccccEEEecCCCCchhhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (591)
|+|||++|+||||||||||||++||.+||+||+++|||+|++++.+ ....||||++||||||||+|+..
T Consensus 80 ~~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lPSP~~Lk~KIlik~K~~~---------- 149 (229)
T cd08627 80 KEHAFVTSEYPIILSIEDHCSIVQQRNMAQHFKKVFGDMLLTKPVDINADGLPSPNQLKRKILIKHKKLY---------- 149 (229)
T ss_pred HHhhccCCCCCEEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCcccCCCcCCChHHhCcCEEEeccccc----------
Confidence 9999999999999999999999999999999999999999997644 46789999999999999998620
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCcccccc
Q 007734 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (591)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (591)
.
T Consensus 150 ---------------------------------------------------------~---------------------- 150 (229)
T cd08627 150 ---------------------------------------------------------R---------------------- 150 (229)
T ss_pred ---------------------------------------------------------c----------------------
Confidence 0
Q ss_pred cCCCceeEeecCHHHHHHHhh-hcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeee
Q 007734 347 VDPDKVRRLSLSEQQLENAVG-TYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (591)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~-~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g 425 (591)
.++||+|+++.++++ ..+.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|
T Consensus 151 ------~~~S~~E~ka~~~~~~~~~~~fv~~n~~~l~RiYP~G~RidSSNy~P~~~W~~G~QmVALN~Qt~d~~M~LN~G 224 (229)
T cd08627 151 ------DMSSFPETKAEKYVNRSKGKKFLQYNRRQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQTPDKPMQMNQA 224 (229)
T ss_pred ------ccCCcChHHHHHHHHhhhHHHHHHhcccceeEeCCCCCcCcCCCCCchhHhccCcEEEEeeccCCCcchhhhcC
Confidence 135788899988875 3568999999999999999999999999999999999999999999999999999999
Q ss_pred eeee
Q 007734 426 MFRA 429 (591)
Q Consensus 426 ~F~~ 429 (591)
||..
T Consensus 225 ~F~~ 228 (229)
T cd08627 225 LFML 228 (229)
T ss_pred cccC
Confidence 9974
No 28
>cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highl
Probab=100.00 E-value=1.1e-101 Score=757.72 Aligned_cols=227 Identities=39% Similarity=0.675 Sum_probs=214.9
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
+|||++||+||||||||||||+|+||.|+||+++|++||++||||||||||||++ ++|||+||+|+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~ess~eay~~AL~~GcR~vElDvwdg~d-gePvV~HG~tlts~i~f~dv~~~I 79 (229)
T cd08592 1 PQDMNNPLSHYWIASSHNTYLTGDQLSSESSLEAYARCLRMGCRCIELDCWDGPD-GMPIIYHGHTLTSKIKFMDVLKTI 79 (229)
T ss_pred CCcccchhHhheeeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCC-CCEEEEeCCcCCCCcCHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccccEEEecCCCCchhhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (591)
++|||++|+|||||||||||+.+||.+||+||+++|||+|++++.+ ....||||++||||||||+|++
T Consensus 80 ~~~aF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~p~~~~~~~lpsP~~Lk~KILik~K~~----------- 148 (229)
T cd08592 80 KEHAFVTSEYPVILSIENHCSLPQQRNMAQAFKEVFGDMLLTQPVDRNADQLPSPNQLKRKIIIKHKKL----------- 148 (229)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhHHhcCCCCccCCCcCCCHHHHCCCEEEEecCC-----------
Confidence 9999999999999999999999999999999999999999987643 4678999999999999998741
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCcccccc
Q 007734 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (591)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (591)
T Consensus 149 -------------------------------------------------------------------------------- 148 (229)
T cd08592 149 -------------------------------------------------------------------------------- 148 (229)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCceeEeecCHHHHHHHh-hhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeee
Q 007734 347 VDPDKVRRLSLSEQQLENAV-GTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (591)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~-~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g 425 (591)
..+++||+|+++.+++ ++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|
T Consensus 149 ----~~~~~S~~E~~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVAlN~Qt~d~~m~lN~g 224 (229)
T cd08592 149 ----FYEMSSFPETKAEKYLNRQKGKIFLKYNRRQLSRVYPKGQRVDSSNYDPVPMWNCGSQMVALNFQTPDKPMQLNQA 224 (229)
T ss_pred ----cccccCCcHHHHHHHHHHhhHHHHHHhhhhcceeeCCCCCcCcCCCCCchHHhcCCceEEEeeccCCChhHHhhcc
Confidence 0235789999999998 47899999999999999999999999999999999999999999999999999999999
Q ss_pred eeeec
Q 007734 426 MFRAN 430 (591)
Q Consensus 426 ~F~~N 430 (591)
||+.|
T Consensus 225 ~F~~N 229 (229)
T cd08592 225 LFMLN 229 (229)
T ss_pred cccCC
Confidence 99987
No 29
>cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, whi
Probab=100.00 E-value=8.8e-101 Score=752.90 Aligned_cols=226 Identities=62% Similarity=1.059 Sum_probs=215.4
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI 187 (591)
||||++||+||||+|||||||+|+||.|+||+++|++||++||||||||||||++ ++|+|+||+|+|++|+|+|||++|
T Consensus 1 ~qDm~~PLs~YfI~sSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~-~ep~V~HG~t~ts~i~f~dvl~~I 79 (228)
T cd08599 1 HHDMTAPLSHYFIFSSHNSYLTGNQLSSRSSTAPIIEALLRGCRVIELDLWPGGR-GDICVLHGGTLTKPVKFEDCIKAI 79 (228)
T ss_pred CCcCCcchhhhEEeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCC-CCeEEEeCCCCcCCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-CCCCCChhhccccEEEecCCCCchhhhhhhhh
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-LKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~-~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (591)
|+|||++|+|||||||||||+.+||.+||++|+++|||+||.|+.+. ...||||++||||||||+|++
T Consensus 80 ~~~aF~~s~yPvILslE~hcs~~qQ~~~a~~l~~~lGd~L~~~~~~~~~~~lPsp~~Lk~Kilik~k~~----------- 148 (228)
T cd08599 80 KENAFTASEYPVIITLENHLSPELQAKAAQILRETLGDKLFYPDSEDLPEEFPSPEELKGKILISDKPP----------- 148 (228)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhhhhccCCCcccccCCCCHHHhCCCEEEEecCC-----------
Confidence 99999999999999999999999999999999999999999987554 479999999999999997731
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCCcccccc
Q 007734 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (591)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (591)
T Consensus 149 -------------------------------------------------------------------------------- 148 (228)
T cd08599 149 -------------------------------------------------------------------------------- 148 (228)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCceeEeecCHHHHHHHhh-hcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccceeeeeccCCCCcceeeeee
Q 007734 347 VDPDKVRRLSLSEQQLENAVG-TYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (591)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~-~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~QT~D~~m~lN~g 425 (591)
.+++||+|+++.++.+ .++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|
T Consensus 149 -----~~~~S~sE~~~~~l~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G 223 (228)
T cd08599 149 -----VIRNSLSETQLKKVIEGEHPTDLIEFTQKNLLRVYPAGLRITSSNYDPMLAWMHGAQMVALNMQGYDRPLWLNRG 223 (228)
T ss_pred -----ccccCccHHHHHHHhhhhcHHHHHHHhhccceeeccCCcccCCCCCCChHHhcCcceEeeeecCCCChhhhhhcc
Confidence 2467999999999996 8899999999999999999999999999999999999999999999999999999999
Q ss_pred eeeec
Q 007734 426 MFRAN 430 (591)
Q Consensus 426 ~F~~N 430 (591)
||+.|
T Consensus 224 ~F~~N 228 (228)
T cd08599 224 KFRAN 228 (228)
T ss_pred cccCC
Confidence 99987
No 30
>cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C. This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic a
Probab=100.00 E-value=2.9e-63 Score=508.62 Aligned_cols=251 Identities=22% Similarity=0.347 Sum_probs=211.6
Q ss_pred ccCCCCcccceeeeccCcccccCCCCC-----CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHH
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLN-----SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~-----g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~d 182 (591)
++||++||+||||++||||||.|+|+. |+++.++|+++|++||||+|||||+|++ ++|+|+||+|+| +++|+|
T Consensus 1 ~~d~~~pLs~~~IpgSHnS~~~~~~~~~~~~~~~tq~~~~~~qL~~G~R~lDir~~~~~~-~~~~v~HG~~~~-~~~f~d 78 (274)
T cd00137 1 HHPDTQPLAHYSIPGTHDTYLTAGQFTIKQVWGLTQTEMYRQQLLSGCRCVDIRCWDGKP-EEPIIYHGPTFL-DIFLKE 78 (274)
T ss_pred CCCCCcCHHHeEEcCchHhhhcCCCCccccccCcCcHHHHHHHHHcCCcEEEEEeecCCC-CCeEEEECCccc-CcCHHH
Confidence 589999999999999999999999998 9999999999999999999999999875 579999999999 999999
Q ss_pred HHHHHhhhccccCCCceEEeeccCCCH--HHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhccccEEEecCCCCchhh
Q 007734 183 CLRSIKEYAFVASEYPVVITLEDHLTP--DLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLE 260 (591)
Q Consensus 183 vi~aI~~~AF~~S~yPvILSlE~Hcs~--~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (591)
||++|+++||++++||||||||+||+. +||.+||++|+++||++|+.|+.+....+|||++||||||||+|+......
T Consensus 79 vl~~i~~fl~~~p~e~vIlsl~~~~~~~~~~q~~~~~~~~~~~g~~l~~~~~~~~~~~Psl~~lrgKIll~~r~~~~~~~ 158 (274)
T cd00137 79 VIEAIAQFLKKNPPETIIMSLKNEVDSMDSFQAKMAEYCRTIFGDMLLTPPLKPTVPLPSLEDLRGKILLLNKKNGFSGP 158 (274)
T ss_pred HHHHHHHHHHHCCCCeEEEEEEecCCCcHHHHHHHHHHHHHhhhhhhccCccccCCCCCCHHHHhhheeEEeeccCCCCC
Confidence 999999999999999999999999998 999999999999999999998765567899999999999999987521100
Q ss_pred hhhhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhccceEeecccccCC
Q 007734 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (591)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 340 (591)
. ..+...|. .+
T Consensus 159 ~---------------~~~~~~~~------------------------------------------------------~~ 169 (274)
T cd00137 159 T---------------GSSNDTGF------------------------------------------------------VS 169 (274)
T ss_pred c---------------ccccccCc------------------------------------------------------CC
Confidence 0 00000000 00
Q ss_pred cccccccCCCceeEeecCHHHHHH----HhhhcchhHHHhhccceeEEecCCCC---------CCCCCCCCcccccc---
Q 007734 341 LKECLKVDPDKVRRLSLSEQQLEN----AVGTYGNDIVRFTQRNLLRIYPKGIR---------VDSSNYNPLIGWSH--- 404 (591)
Q Consensus 341 ~~~~~~~~~~~~~~~S~sE~~~~~----~~~~~~~~~~~~~~~~l~RvYP~g~R---------i~SSN~~P~~~W~~--- 404 (591)
+..... .....+++|++|.++.. +..+...+++.+|+++|+|+||+|+| ++||||+|+.+|++
T Consensus 170 ~~~~~~-~~~~~~~~sqdE~k~~~~~K~~~i~~~~~~~~~n~~~l~~nypsgtr~~~~~~~~a~~snn~~p~~~w~~~~~ 248 (274)
T cd00137 170 FEFSTQ-KNRSYNISSQDEYKAYDDEKVKLIKATVQFVDYNKNQLSRNYPSGTSGGTAWYYYAMDSNNYMPQMFWNANPA 248 (274)
T ss_pred cccccc-cCCCceEEeechhhhcchhhHHHHHhHHHHHhcCcceEEEEccCccCCCCcchhhHhhcCccChHHHhccccC
Confidence 000000 01123567888888854 33445667899999999999999999 99999999999999
Q ss_pred cceeeeeccCCCCcceeeeeeeeeec
Q 007734 405 GAQMVAFNMQGHGRSLWLMHGMFRAN 430 (591)
Q Consensus 405 G~QmVALN~QT~D~~m~lN~g~F~~N 430 (591)
|||||||||||.|++|+||+|+|+.|
T Consensus 249 g~qiValdfqt~~~~~~ln~~~f~~N 274 (274)
T cd00137 249 GCGIVILDFQTMDLPMQQYMAVIEFN 274 (274)
T ss_pred CceEEEeeCcCCCccHHHHhhhhccC
Confidence 99999999999999999999999987
No 31
>smart00149 PLCYc Phospholipase C, catalytic domain (part); domain Y. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=100.00 E-value=2.2e-45 Score=325.11 Aligned_cols=115 Identities=45% Similarity=0.730 Sum_probs=105.3
Q ss_pred ccceEeecccccCCcccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccccc
Q 007734 327 RKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGA 406 (591)
Q Consensus 327 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~ 406 (591)
++||+|+.++++.++.+.....+ ..+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+++|++||
T Consensus 1 S~Lv~y~~~~~f~~f~~~~~~~~-~~~~~S~~E~~~~~~~~~~~~~~~~~n~~~l~RvYP~g~R~dSSNy~P~~~W~~G~ 79 (115)
T smart00149 1 SDLVIYCAPVKFRSFESAESKDP-FYEMSSFSETKAKKLLKKAPTDFVRYNQRQLSRVYPKGTRVDSSNYNPQVFWNAGC 79 (115)
T ss_pred CCEeeEecCCCCCCccchhhcCC-CceecccCHHHHHHHHHHhHHHHHHhccccceEECcCCCcCCCCCCCCHHHHcCCc
Confidence 47889988887777766554322 56899999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeccCCCCcceeeeeeeeeecCceeeeecCCcc
Q 007734 407 QMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFL 442 (591)
Q Consensus 407 QmVALN~QT~D~~m~lN~g~F~~NG~cGYVLKP~~l 442 (591)
|||||||||+|++||||+|||+.||+|||||||++|
T Consensus 80 QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVLKP~~l 115 (115)
T smart00149 80 QMVALNFQTPDKPMQLNQGMFRANGGCGYVLKPDFL 115 (115)
T ss_pred eEeEeecCCCChHHHHHhhHhhcCCCCCeEeCCCCC
Confidence 999999999999999999999999999999999986
No 32
>PF00387 PI-PLC-Y: Phosphatidylinositol-specific phospholipase C, Y domain This entry is for the whole phospholipase C protein; InterPro: IPR001711 Phosphatidylinositol-specific phospholipase C (3.1.4.11 from EC), an eukaryotic intracellular enzyme, plays an important role in signal transduction processes [] (see IPR001192 from INTERPRO). It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as 'X-box' (see IPR000909 from INTERPRO) and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. At the C-terminal of the Y-box, there is a C2 domain (see IPR000008 from INTERPRO) possibly involved in Ca-dependent membrane attachment.; GO: 0004435 phosphatidylinositol phospholipase C activity, 0006629 lipid metabolic process, 0007165 signal transduction, 0035556 intracellular signal transduction; PDB: 3OHM_B 2FJU_B 2ZKM_X 3QR1_D 3QR0_A 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=100.00 E-value=8.2e-46 Score=330.34 Aligned_cols=118 Identities=37% Similarity=0.644 Sum_probs=89.9
Q ss_pred hhccceEeecccccCCcccccccCCCceeEeecCHHHHHHHhhhcchhHHHhhccceeEEecCCCCCCCCCCCCcccccc
Q 007734 325 EYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSH 404 (591)
Q Consensus 325 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~ 404 (591)
||++|++|..+..+.++...-.. ....+++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+++|++
T Consensus 1 ELSdLvvY~~s~~f~~~~~~~~~-~~~~~~~S~sE~~~~~l~~~~~~~l~~~~~~~l~RvyP~~~R~~SsN~~P~~~W~~ 79 (118)
T PF00387_consen 1 ELSDLVVYCRSVKFKSFEDSERK-KQPWHMSSFSESKAKKLVKEHPSELVEHNKRHLVRVYPSGTRIDSSNFNPLPFWNC 79 (118)
T ss_dssp HHHTTESSCEEE----HHHHHHH-TSTTEEEEEEHHHHHHHHHHCHHHHHHHHHHSEEEEE--TT-TT-----THHHHTT
T ss_pred ChhhhheeeccccCCCcCChhhc-CCccEEEeccHHHHHHHHHHccchHHHhcccceEEecCCccccCCCCCChHHHhhc
Confidence 58899988777665555442222 22578899999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeccCCCCcceeeeeeeeeecCceeeeecCCccc
Q 007734 405 GAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLL 443 (591)
Q Consensus 405 G~QmVALN~QT~D~~m~lN~g~F~~NG~cGYVLKP~~lr 443 (591)
|||||||||||+|++||||+|||++||+|||||||++||
T Consensus 80 G~Q~vALN~Qt~d~~m~ln~g~F~~NG~cGYVLKP~~lR 118 (118)
T PF00387_consen 80 GCQMVALNFQTPDEPMQLNQGMFRQNGGCGYVLKPEYLR 118 (118)
T ss_dssp T-SEEEB-TTS-SHHHHHHHHHTTTGGG-SEEE--GGGT
T ss_pred cCccceeeccCCChhHHHHHhhhccCCCCCeEeCchhhC
Confidence 999999999999999999999999999999999999997
No 33
>smart00148 PLCXc Phospholipase C, catalytic domain (part); domain X. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=100.00 E-value=2.1e-40 Score=305.30 Aligned_cols=134 Identities=46% Similarity=0.816 Sum_probs=128.1
Q ss_pred cCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHh
Q 007734 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIK 188 (591)
Q Consensus 109 qdM~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI~ 188 (591)
|||++||+||||++|||||++|+|+.|+++..+|+++|.+||||+|||||++++ ++|+|+||+|+++.++|+|||++|+
T Consensus 1 ~d~~~pLs~~~I~gtH~sy~~~~~~~~~~q~~~i~~qL~~GvR~~dirv~~~~~-~~~~v~Hg~~~~~~~~~~dvL~~i~ 79 (135)
T smart00148 1 QDMDKPLSHYFIPSSHNTYLTGKQLWGESSVEGYIQALDHGCRCVELDCWDGPD-GEPVIYHGHTFTLPIKLSEVLEAIK 79 (135)
T ss_pred CCCCccHhhCEEcccccccccCccccCcccHHHHHHHHHhCCCEEEEEcccCCC-CCEEEEECCcccccEEHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999876 4699999999999999999999999
Q ss_pred hhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhh
Q 007734 189 EYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPES 243 (591)
Q Consensus 189 ~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~-~~~~lPSP~~ 243 (591)
++||..+.|||||+||+||+.++|.+||++|+++||++|+.|+.+ ..+.+|||++
T Consensus 80 ~fl~~~p~e~VIl~l~~~~~~~~~~~l~~~l~~~~g~~l~~~~~~~~~~~~ps~~~ 135 (135)
T smart00148 80 DFAFVTSPYPVILSLENHCSPDQQAKMAQMFKEIFGDMLYTPPLTSSLEVLPSPEQ 135 (135)
T ss_pred HHHHhCCCCcEEEeehhhCCHHHHHHHHHHHHHHHhHhhcCCCCccCcCcCCCCCC
Confidence 999999999999999999999999999999999999999998854 4678999985
No 34
>PF00388 PI-PLC-X: Phosphatidylinositol-specific phospholipase C, X domain This entry is for the whole phospholipase C protein; InterPro: IPR000909 Phosphatidylinositol-specific phospholipase C (3.1.4.11 from EC), a eukaryotic intracellular enzyme, plays an important role in signal transduction processes []. It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as the 'X-box' and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. By profile analysis, we could show that sequences with significant similarity to the X-box domain occur also in prokaryotic and trypanosome PI-specific phospholipases C. Apart from this region, the prokaryotic enzymes show no similarity to their eukaryotic counterparts.; GO: 0004629 phospholipase C activity, 0006629 lipid metabolic process, 0035556 intracellular signal transduction; PDB: 2FJU_B 2ZKM_X 3V18_A 3V1H_A 3V16_A 3QR1_D 3EA3_A 3EA1_A 2OR2_A 1T6M_B ....
Probab=100.00 E-value=3.7e-37 Score=287.72 Aligned_cols=143 Identities=29% Similarity=0.567 Sum_probs=128.9
Q ss_pred CCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhh
Q 007734 111 MTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEY 190 (591)
Q Consensus 111 M~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI~~~ 190 (591)
|+.|+|||||++||||||+++|+.|++....|.++|..||||+|||||++++ +++.|+||+++++.++|+|||++|+++
T Consensus 1 ms~P~th~si~~sh~t~~~~~~~~~~~Q~~~i~~QL~~GiR~lDlrv~~~~~-~~~~v~Hg~~~~~~~~~~dvL~~i~~f 79 (146)
T PF00388_consen 1 MSIPGTHDSISSSHNTYLTGGQLWSKTQSWSIREQLESGIRYLDLRVWDGND-GELVVYHGITSTSGITFEDVLNDIRDF 79 (146)
T ss_dssp TCSEGGGEEEGCBSSTTBSSTSHHC-B-SHHHHHHHHTT--EEEEEEEEETT-SSEEEEETTSEE-EEEHHHHHHHHHHH
T ss_pred CCCCcccceecccCCCcccccccccCcchHhHHHHHhccCceEEEEEEcCCC-CceEEEeCCEeeeeEeHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999865 359999999999999999999999999
Q ss_pred ccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC---CCCCCCChhhccccEEEecCC
Q 007734 191 AFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE---CLKEFPSPESLKRRIIISTKP 254 (591)
Q Consensus 191 AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~---~~~~lPSP~~Lk~KIlik~K~ 254 (591)
+|..+.+||||+|++||+.++|..+|++|+++||+.|+.++.. ....+|+|++|||||||..||
T Consensus 80 l~~~p~E~VIl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ptl~elrgKIvl~~r~ 146 (146)
T PF00388_consen 80 LFEHPSEPVILSLKHEYSPEQQNKLAEILKEILGDRLYQPPPDPWYQENNLPTLGELRGKIVLLRRK 146 (146)
T ss_dssp TTHSTTS-EEEEEEEESTHHHHHHHHHHHHHHHGGGBTTSTTTTCSTTSSS-BTTTTTTSEEEEEE-
T ss_pred HhcCCCeEEEEEeecccchhhHHHHHHHHHHHHhhhhcCCcccccccCCCCCChHHhcCcEEEEEcC
Confidence 9999999999999999999999999999999999999997754 468999999999999999875
No 35
>cd08589 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins. This subfamily corresponds to the catalytic domain present in Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1 (SaPLC1) and similar proteins. The typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) catalyzes Ca2+-independent hydrolysis of the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). The catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. In contrast, SaPLC1 is the first known natural Ca2+-dependent bacterial PI-PLC. It is more closely related to the eukaryotic PI-PLCs rather than the typical bacterial PI-PLCs. It participates in PI metabolism to generate myo-inositol-1-phosphate and myo-inositol-1:2-cy
Probab=99.86 E-value=9.3e-22 Score=203.11 Aligned_cols=146 Identities=25% Similarity=0.421 Sum_probs=127.7
Q ss_pred cCCCCcccceeeeccCcccccC------------CCC--CCCCChHHHHHHHhCCCcEEEEEeecCCC------------
Q 007734 109 HDMTAPVSHYFIYTGHNSYLTG------------NQL--NSDCSDVPIIRALQKGVRVIELDIWPNSK------------ 162 (591)
Q Consensus 109 qdM~~PLs~YfI~SSHNTYL~g------------~Ql--~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~------------ 162 (591)
.+.+.||+||++-.|||+|..| +|+ ....+-.....+|..|+|.+|||+|..+.
T Consensus 3 ~~~~~pln~~~~igtHNSY~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~QLd~GvR~LELDv~~d~~gg~~a~P~~~~~ 82 (324)
T cd08589 3 AADALRLNQIQVVGTHNSYHKEIDPAELALLAVNPPLAEGLDYSHPPLADQLDSGVRQLELDVWADPEGGRYAHPLGLAP 82 (324)
T ss_pred ccCCCCccccEEEeecccccccCCchhhhhhcccccccccccCCCccHHHHHhhCcceEEEEEeecCCcccccccccccc
Confidence 3567899999999999999998 777 34455567899999999999999996543
Q ss_pred -------CCCceEeeCCcc---cccchHHHHHHHHhhhccc-cCCCceEEeeccCCCH------------HHHHHHHHHH
Q 007734 163 -------KDNVDVLHGGTM---TAPVELIKCLRSIKEYAFV-ASEYPVVITLEDHLTP------------DLQAKVAEMV 219 (591)
Q Consensus 163 -------~~~piv~HG~tl---ts~i~f~dvi~aI~~~AF~-~S~yPvILSlE~Hcs~------------~qQ~~ma~~l 219 (591)
++..-|+|+.++ |+..+|.+||..||+++|. .++|||+|.||.|.+. +-|..+++.+
T Consensus 83 ~~~~~~~~~g~~V~H~~~~d~~t~C~~l~~cL~~Ik~W~~anP~hvPv~I~Le~kd~~~~~~~~~~~~~~~~~~~ld~~i 162 (324)
T cd08589 83 DDAAVMKKPGWKVSHIPDLDNRNNCVTLEDCLDDVRAWSDAHPGHVPIFIKLELKDGFSALPGGGVPFTARGPAQLDALI 162 (324)
T ss_pred cccccccCCCeEEEcCCCcCCCCChhhHHHHHHHHHHHHHhCCCcccEEEEEEeccCCccccCcccccchhHHHHHHHHH
Confidence 345689999998 8999999999999999998 7999999999999987 7899999999
Q ss_pred HHHhhc-cccCCCC-----CC------CCCCCChhhccccEEEecCC
Q 007734 220 TQTLGE-ILFTPGS-----EC------LKEFPSPESLKRRIIISTKP 254 (591)
Q Consensus 220 ~~~~Gd-~L~~~~~-----~~------~~~lPSP~~Lk~KIlik~K~ 254 (591)
+++||+ +|++|+. .. ...+|||++|||||||--+.
T Consensus 163 ~~vfG~~~L~tPddvrg~~~tL~~av~~~~WPtl~~lrGKvl~~~~~ 209 (324)
T cd08589 163 RSVLGDDKLITPDDVRGGAATLDEAVRAGGWPTLSALRGKVLFVLDP 209 (324)
T ss_pred HHhcCCccEEcCccccccccchhhhhccCCCCChHHHCCCEEEEecC
Confidence 999999 9999974 22 26899999999999999775
No 36
>cd00275 C2_PLC_like C2 domain present in Phosphoinositide-specific phospholipases C (PLC). PLCs are involved in the hydrolysis of phosphatidylinositol-4,5-bisphosphate (PIP2) to d-myo-inositol-1,4,5-trisphosphate (1,4,5-IP3) and sn-1,2-diacylglycerol (DAG). 1,4,5-IP3 and DAG are second messengers in eukaryotic signal transduction cascades. PLC is composed of a N-terminal PH domain followed by a series of EF hands, a catalytic TIM barrel and a C-terminal C2 domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking
Probab=99.81 E-value=5.7e-19 Score=160.22 Aligned_cols=125 Identities=43% Similarity=0.657 Sum_probs=109.1
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCC-CceeeeccccCCCC-CCccCcEEEEeeecCCccEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA-DTVMKKTKTLEDNW-IPSWNEEFEFPLSVPELALLRIE 539 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~-d~~k~kTkvi~nn~-NPvWNEtf~F~v~~pela~Lrf~ 539 (591)
..|+|+|++|++|+.. .....+..||||+|++.+.+. +..+.||+++.++. ||+|||+|.|.+..++.+.|+|.
T Consensus 2 ~~l~v~vi~a~~L~~~----~~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~~P~w~e~f~f~~~~~~~~~l~~~ 77 (128)
T cd00275 2 LTLTIKIISGQQLPKP----KGDKGSIVDPYVEVEIHGLPADDSAKFKTKVVKNNGFNPVWNETFEFDVTVPELAFLRFV 77 (128)
T ss_pred eEEEEEEEeeecCCCC----CCCCCCccCCEEEEEEEeCCCCCCCcEeeeeecCCCcCCccCCcEEEEEeCCCeEEEEEE
Confidence 4699999999999642 111346789999999988665 56778999988775 99999999999998888899999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCcceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 540 VHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 540 V~D~d~~~~dd~lGq~~ipL~sL~~GyR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
|||.+.. ++++||++.++++.|..||++++|+++.|++...++|+|++++.
T Consensus 78 V~d~~~~-~~~~iG~~~~~l~~l~~g~~~~~l~~~~~~~~~~~~l~v~~~~~ 128 (128)
T cd00275 78 VYDEDSG-DDDFLGQACLPLDSLRQGYRHVPLLDSKGEPLELSTLFVHIDIT 128 (128)
T ss_pred EEeCCCC-CCcEeEEEEEEhHHhcCceEEEEecCCCCCCCcceeEEEEEEEC
Confidence 9999877 79999999999999999999999999999988899999999974
No 37
>cd08590 PI-PLCc_Rv2075c_like Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins. This subfamily corresponds to the catalytic domain present in uncharacterized Mycobacterium tuberculosis Rv2075c and its homologs. Members in this family are more closely related to the Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1(SaPLC1)-like proteins rather than the typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). In contrast, SaPLC1-like proteins have two Ca2+-chelating amino acid substitutions which convert them to metal-dependent bacterial PI-PLC. Rv2075c and its homologs have the same amino acid substitutions as well, which might suggest they have metal-dependent PI-PLC activity.
Probab=99.77 E-value=2.1e-18 Score=176.19 Aligned_cols=143 Identities=22% Similarity=0.374 Sum_probs=121.0
Q ss_pred ccCCCCcccceeeeccCcccccCCCCC----------CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccc-
Q 007734 108 HHDMTAPVSHYFIYTGHNSYLTGNQLN----------SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA- 176 (591)
Q Consensus 108 ~qdM~~PLs~YfI~SSHNTYL~g~Ql~----------g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts- 176 (591)
..||+.||++|+|-.|||+|..+..-. +....-.+.+.|..|||.+|||||..+ +++.++||.....
T Consensus 3 ~ld~~~pL~~~~~~gTHNS~~s~~~~~~~~~~~~~~~~~nQ~~sI~~QL~~GvR~LdLdv~~~~--~~l~v~Hg~~~~~~ 80 (267)
T cd08590 3 NLDSNAPLCQAQILGTHNSYNSRAYGYGNRYHGVRYLDPNQELSITDQLDLGARFLELDVHWTT--GDLRLCHGGDHGYL 80 (267)
T ss_pred CCCCCCchhhceeeeecccccccccccccccccceeeccccCcCHHHHHhhCCcEEEEeeeeCC--CCEEEEccCccccc
Confidence 468999999999999999999876532 233344578999999999999999864 4689999987654
Q ss_pred ------cchHHHHHHHHhhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC----CCCCCCChhhcc-
Q 007734 177 ------PVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE----CLKEFPSPESLK- 245 (591)
Q Consensus 177 ------~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~----~~~~lPSP~~Lk- 245 (591)
...|++|++.|+++++....++|||.||+|++..++..+.++|+++||++||.|+.. .....|+.++++
T Consensus 81 ~~~~~~~~~l~d~L~eI~~fL~~nP~EvViL~~e~~~~~~~~~~l~~~l~~~fGd~ly~P~~~~~~~~~~~wpTL~em~~ 160 (267)
T cd08590 81 GVCSSEDRLFEDGLNEIADWLNANPDEVVILYLEDHGDGGKDDELNALLNDAFGDLLYTPSDCDDLQGLPNWPTKEDMLN 160 (267)
T ss_pred cccccccchHHHHHHHHHHHHHhCCCCcEEEEEecCCCcccHHHHHHHHHHHhCCeEEcCCcccccccCCCCCCHHHHHh
Confidence 568999999999999999999999999999999888899999999999999998632 146789999996
Q ss_pred -ccEEEec
Q 007734 246 -RRIIIST 252 (591)
Q Consensus 246 -~KIlik~ 252 (591)
||.||--
T Consensus 161 ~GkrViv~ 168 (267)
T cd08590 161 SGKQVVLA 168 (267)
T ss_pred CCCEEEEE
Confidence 7776653
No 38
>cd08395 C2C_Munc13 C2 domain third repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi
Probab=99.74 E-value=2.2e-17 Score=149.23 Aligned_cols=104 Identities=26% Similarity=0.368 Sum_probs=85.3
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEecc--CCCceeeeccccCCCCCCccCcEEEEeeec---CCccEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGV--PADTVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALLR 537 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~--p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~---pela~Lr 537 (591)
+|+|+|++|++|+. .+ .+.+||||+|++.|. +....++||+++.+++||+|||+|+|.+.. ++.+.|+
T Consensus 1 kL~V~Vi~A~~L~~------~d-~g~~DPYVkV~l~g~~~~~k~~k~kTkv~~~tlnPvwNE~f~F~v~~~~~~~~~~L~ 73 (120)
T cd08395 1 KVTVKVVAANDLKW------QT-TGMFRPFVEVNLIGPHLSDKKRKFATKSKNNNWSPKYNETFQFILGNEDDPESYELH 73 (120)
T ss_pred CEEEEEEECcCCCc------cc-CCCCCCEEEEEEecCCCcccccEeeeEEecCCCCCccCcEEEEEeeCcCCCceeEEE
Confidence 48999999999964 12 277899999999873 233345789999999999999999999974 3457899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc---eEEEccC
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHD 573 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d 573 (591)
|.|+|+|..+++++||++++||+++..+- .|+||..
T Consensus 74 ~~V~D~d~~~~dd~IG~~~l~l~~~~~~~~~~~w~~L~~ 112 (120)
T cd08395 74 ICVKDYCFARDDRLVGVTVLQLRDIAQAGSCACWLPLGR 112 (120)
T ss_pred EEEEEecccCCCCEEEEEEEEHHHCcCCCcEEEEEECcC
Confidence 99999998778999999999999998764 5778843
No 39
>cd08682 C2_Rab11-FIP_classI C2 domain found in Rab11-family interacting proteins (FIP) class I. Rab GTPases recruit various effector proteins to organelles and vesicles. Rab11-family interacting proteins (FIPs) are involved in mediating the role of Rab11. FIPs can be divided into three classes: class I FIPs (Rip11a, Rip11b, RCP, and FIP2) which contain a C2 domain after N-terminus of the protein, class II FIPs (FIP3 and FIP4) which contain two EF-hands and a proline rich region, and class III FIPs (FIP1) which exhibits no homology to known protein domains. All FIP proteins contain a highly conserved, 20-amino acid motif at the C-terminus of the protein, known as Rab11/25 binding domain (RBD). Class I FIPs are thought to bind to endocytic membranes via their C2 domain, which interacts directly with phospholipids. Class II FIPs do not have any membrane binding domains leaving much to speculate about the mechanism involving FIP3 and FIP4 interactions with endocytic membranes. The member
Probab=99.67 E-value=5.2e-16 Score=141.17 Aligned_cols=115 Identities=23% Similarity=0.356 Sum_probs=94.4
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeec-----CCccEEEE
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-----PELALLRI 538 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~-----pela~Lrf 538 (591)
++|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+.. +....|.|
T Consensus 1 ~~V~V~~A~~L~~------~d~~g~~dpYv~v~l~~-----~~~kT~v~~~t~nP~Wne~f~F~v~~~~~~~~~~~~l~~ 69 (126)
T cd08682 1 VQVTVLQARGLLC------KGKSGTNDAYVIIQLGK-----EKYSTSVKEKTTSPVWKEECSFELPGLLSGNGNRATLQL 69 (126)
T ss_pred CEEEEEECcCCcC------CCCCcCCCceEEEEECC-----eeeeeeeecCCCCCEeCceEEEEecCcccCCCcCCEEEE
Confidence 4799999999963 23456789999999853 57799999999999999999999876 34578999
Q ss_pred EEEeccCCCCCCccEEEEEECCccC--Cc---ceEEEccCCCCCcc-cCeEEEEEEE
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELK--QG---IRAVPLHDRKGERY-KSVKLLMHFE 589 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~--~G---yR~vpL~d~~g~~~-~~asLlv~i~ 589 (591)
.|||++..+++++||++.+||+.+. .| .+|.+|.+..++.- ..+.|.|+|+
T Consensus 70 ~v~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~W~~L~~~~~~~~~~~Gei~l~~~ 126 (126)
T cd08682 70 TVMHRNLLGLDKFLGQVSIPLNDLDEDKGRRRTRWFKLESKPGKDDKERGEIEVDIQ 126 (126)
T ss_pred EEEEccccCCCceeEEEEEEHHHhhccCCCcccEEEECcCCCCCCccccceEEEEeC
Confidence 9999998888999999999999986 45 47999987776533 4578888774
No 40
>cd04036 C2_cPLA2 C2 domain present in cytosolic PhosphoLipase A2 (cPLA2). A single copy of the C2 domain is present in cPLA2 which releases arachidonic acid from membranes initiating the biosynthesis of potent inflammatory mediators such as prostaglandins, leukotrienes, and platelet-activating factor. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants o
Probab=99.67 E-value=6.5e-16 Score=139.03 Aligned_cols=113 Identities=29% Similarity=0.410 Sum_probs=93.0
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|+|+|++|++|+. .+..+.+||||+|.+.+.+ ..++||++++++.||+|||+|.|.+..+....|+|.|||+
T Consensus 2 L~V~vi~a~~L~~------~~~~~~~Dpyv~v~~~~~~--~~~~kT~vv~~t~nP~Wne~f~f~i~~~~~~~l~v~v~d~ 73 (119)
T cd04036 2 LTVRVLRATNITK------GDLLSTPDCYVELWLPTAS--DEKKRTKTIKNSINPVWNETFEFRIQSQVKNVLELTVMDE 73 (119)
T ss_pred eEEEEEEeeCCCc------cCCCCCCCcEEEEEEcCCC--CccCccceecCCCCCccceEEEEEeCcccCCEEEEEEEEC
Confidence 7899999999964 2335678999999986532 3567999999999999999999998776567899999999
Q ss_pred cCCCCCCccEEEEEECCccCCcce---EEEccCCCCCcccCeEEEEEEEE
Q 007734 544 DMSEKDDFGGQTCLPVSELKQGIR---AVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~~GyR---~vpL~d~~g~~~~~asLlv~i~f 590 (591)
|.. ++++||++.+||+.|..|.+ +++|.+. +.+.|.++|++
T Consensus 74 d~~-~~~~iG~~~~~l~~l~~g~~~~~~~~L~~~-----~~g~l~~~~~~ 117 (119)
T cd04036 74 DYV-MDDHLGTVLFDVSKLKLGEKVRVTFSLNPQ-----GKEELEVEFLL 117 (119)
T ss_pred CCC-CCcccEEEEEEHHHCCCCCcEEEEEECCCC-----CCceEEEEEEe
Confidence 987 79999999999999998864 6677643 24678888776
No 41
>cd04042 C2A_MCTP_PRT C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protein
Probab=99.65 E-value=2e-15 Score=136.23 Aligned_cols=116 Identities=24% Similarity=0.370 Sum_probs=95.8
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEe
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 542 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 542 (591)
+|+|+|++|++|+. .+..+.+||||+|.+.+ ...+||+++.++.||+|||+|.|.+..++ ..|.|.|||
T Consensus 1 ~L~v~v~~a~~L~~------~d~~g~~Dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~f~v~~~~-~~l~~~v~D 69 (121)
T cd04042 1 QLDIHLKEGRNLAA------RDRGGTSDPYVKFKYGG----KTVYKSKTIYKNLNPVWDEKFTLPIEDVT-QPLYIKVFD 69 (121)
T ss_pred CeEEEEEEeeCCCC------cCCCCCCCCeEEEEECC----EEEEEeeeccCCCCCccceeEEEEecCCC-CeEEEEEEe
Confidence 48999999999963 24456789999999864 34679999999999999999999986553 679999999
Q ss_pred ccCCCCCCccEEEEEECCccCCc---ceEEEccCCCCCcccCeEEEEEEEE
Q 007734 543 YDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 543 ~d~~~~dd~lGq~~ipL~sL~~G---yR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
++..+++++||++.+||..+..| ..+++|.++.+.. ..++|.+.+.|
T Consensus 70 ~d~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~-~~G~l~l~~~~ 119 (121)
T cd04042 70 YDRGLTDDFMGSAFVDLSTLELNKPTEVKLKLEDPNSDE-DLGYISLVVTL 119 (121)
T ss_pred CCCCCCCcceEEEEEEHHHcCCCCCeEEEEECCCCCCcc-CceEEEEEEEE
Confidence 99888899999999999999855 3589999887743 35688888775
No 42
>cd08381 C2B_PI3K_class_II C2 domain second repeat present in class II phosphatidylinositol 3-kinases (PI3Ks). There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permut
Probab=99.65 E-value=1.2e-15 Score=138.27 Aligned_cols=103 Identities=27% Similarity=0.392 Sum_probs=85.5
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEee-ec--CCccEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SV--PELALLRI 538 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v-~~--pela~Lrf 538 (591)
..|.|+|+.|++|+. .+ .+.+||||+|.+.+.+.+..++||++++++.||+|||+|.|.+ .. .....|+|
T Consensus 13 ~~L~V~Vi~A~~L~~------~~-~~~~DpyVkv~l~~~~~~~~~~kT~v~~~~~nP~wnE~F~f~~~~~~~l~~~~L~~ 85 (122)
T cd08381 13 GTLFVMVMHAKNLPL------LD-GSDPDPYVKTYLLPDPQKTTKRKTKVVRKTRNPTFNEMLVYDGLPVEDLQQRVLQV 85 (122)
T ss_pred CEEEEEEEEeeCCCC------CC-CCCCCCEEEEEEeeCCccCCceeCCccCCCCCCCcccEEEEecCChHHhCCCEEEE
Confidence 469999999999964 23 4678999999998766666788999999999999999999987 32 23468999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc---eEEEc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPL 571 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL 571 (591)
.|||+|..+++++||++.+||+.+..+- .|.+|
T Consensus 86 ~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L 121 (122)
T cd08381 86 SVWSHDSLVENEFLGGVCIPLKKLDLSQETEKWYPL 121 (122)
T ss_pred EEEeCCCCcCCcEEEEEEEeccccccCCCccceEEC
Confidence 9999998888999999999999997553 35554
No 43
>cd04016 C2_Tollip C2 domain present in Toll-interacting protein (Tollip). Tollip is a part of the Interleukin-1 receptor (IL-1R) signaling pathway. Tollip is proposed to link serine/threonine kinase IRAK to IL-1Rs as well as inhibiting phosphorylation of IRAK. There is a single C2 domain present in Tollip. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice varian
Probab=99.65 E-value=2.7e-15 Score=135.85 Aligned_cols=115 Identities=18% Similarity=0.244 Sum_probs=93.6
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCC-CCCCccCcEEEEeeecCCccEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEV 540 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~n-n~NPvWNEtf~F~v~~pela~Lrf~V 540 (591)
++|.|+|++|++++. .+ ++.+||||+|.+.+ .+.||+++.+ +.||+|||+|.|.+... ...|.|.|
T Consensus 2 g~L~v~v~~Ak~l~~------~~-~g~sDPYv~i~lg~-----~~~kT~v~~~~~~nP~WNe~F~f~v~~~-~~~l~~~V 68 (121)
T cd04016 2 GRLSITVVQAKLVKN------YG-LTRMDPYCRIRVGH-----AVYETPTAYNGAKNPRWNKTIQCTLPEG-VDSIYIEI 68 (121)
T ss_pred cEEEEEEEEccCCCc------CC-CCCCCceEEEEECC-----EEEEeEEccCCCCCCccCeEEEEEecCC-CcEEEEEE
Confidence 469999999997632 23 57899999999954 5679999876 69999999999998654 35699999
Q ss_pred EeccCCCCCCccEEEEEECC-ccCCcc---eEEEccCCCCCcccCeEEEEEEEE
Q 007734 541 HEYDMSEKDDFGGQTCLPVS-ELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 541 ~D~d~~~~dd~lGq~~ipL~-sL~~Gy---R~vpL~d~~g~~~~~asLlv~i~f 590 (591)
||+|..++|++||.+.+||. .+.+|. .|.+|...+|++.. +.|.+.+.|
T Consensus 69 ~d~d~~~~dd~iG~~~i~l~~~~~~g~~~~~W~~L~~~~~~~~~-g~i~l~l~y 121 (121)
T cd04016 69 FDERAFTMDERIAWTHITIPESVFNGETLDDWYSLSGKQGEDKE-GMINLVFSY 121 (121)
T ss_pred EeCCCCcCCceEEEEEEECchhccCCCCccccEeCcCccCCCCc-eEEEEEEeC
Confidence 99999888999999999995 687774 68999988887644 577776653
No 44
>cd08557 PI-PLCc_bacteria_like Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins. This subfamily corresponds to the catalytic domain present in bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and their sequence homologs found in eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Its catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. Eukaryotic homologs in this family are named as phosphatidylinositol-specific phospholipase C X
Probab=99.64 E-value=5.3e-16 Score=158.76 Aligned_cols=144 Identities=22% Similarity=0.293 Sum_probs=125.2
Q ss_pred CCCCcccceeeeccCcccccCCCCC-------CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHH
Q 007734 110 DMTAPVSHYFIYTGHNSYLTGNQLN-------SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182 (591)
Q Consensus 110 dM~~PLs~YfI~SSHNTYL~g~Ql~-------g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~d 182 (591)
+.+.||+++.|-.|||+|..+.... +.+.-..+...|..|+|++|||||..++++++.|+||.......+|.|
T Consensus 4 ~~~~~l~~~~ipGtHnS~~~~~~~~~~~~~~~~~~Q~~~i~~QL~~GiR~~dlr~~~~~~~~~~~~~H~~~~~~~~~~~~ 83 (271)
T cd08557 4 LDDLPLSQLSIPGTHNSYAYTIDGNSPIVSKWSKTQDLSITDQLDAGVRYLDLRVAYDPDDGDLYVCHGLFLLNGQTLED 83 (271)
T ss_pred cccCchhcccccccchhceeccCCCchhhhhHHhccCCCHHHHHhcCceEEEEEeeeecCCCcEEEEccccccCcccHHH
Confidence 5788999999999999999887642 334445678999999999999999875446789999988887899999
Q ss_pred HHHHHhhhccccCCCceEEeeccCCCHHH---HHHHHHHHHHHhhccccCCCCCCCCCCCChhhcc-ccEEEecCC
Q 007734 183 CLRSIKEYAFVASEYPVVITLEDHLTPDL---QAKVAEMVTQTLGEILFTPGSECLKEFPSPESLK-RRIIISTKP 254 (591)
Q Consensus 183 vi~aI~~~AF~~S~yPvILSlE~Hcs~~q---Q~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~Lk-~KIlik~K~ 254 (591)
|++.|+++.......+|||.||.+++... +..++++|+++||+.++.+. ......|++++|+ ||+||-...
T Consensus 84 vL~~i~~fl~~~p~E~vil~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ptL~el~~gK~vi~~~~ 158 (271)
T cd08557 84 VLNEVKDFLDAHPSEVVILDLEHEYGGDNGEDHDELDALLRDVLGDPLYRPP-VRAGGWPTLGELRAGKRVLLFYF 158 (271)
T ss_pred HHHHHHHHHHHCCCcEEEEEEEccCCCcchhhHHHHHHHHHHHhCccccCCc-cccCCCCcHHHHhcCCeEEEEEC
Confidence 99999999999999999999999998875 89999999999999999875 3346889999999 999998654
No 45
>cd04019 C2C_MCTP_PRT_plant C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates
Probab=99.63 E-value=3.2e-15 Score=140.40 Aligned_cols=117 Identities=21% Similarity=0.338 Sum_probs=96.5
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCC-CCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~n-n~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
.|+|+|+.|++|+. .+.++.+||||+|.+.+ .+.||+++.+ +.||+|||+|.|.+..+....|.|.|+
T Consensus 1 ~L~V~Vi~A~~L~~------~d~~g~sDPYV~v~l~~-----~~~kTk~~~~~t~nP~WNE~F~f~v~~~~~~~l~v~V~ 69 (150)
T cd04019 1 YLRVTVIEAQDLVP------SDKNRVPEVFVKAQLGN-----QVLRTRPSQTRNGNPSWNEELMFVAAEPFEDHLILSVE 69 (150)
T ss_pred CEEEEEEEeECCCC------CCCCCCCCeEEEEEECC-----EEeeeEeccCCCCCCcccCcEEEEecCccCCeEEEEEE
Confidence 38999999999964 24457899999999964 5778999877 599999999999987665678999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc-------ceEEEccCCCC-----Cc-ccCeEEEEEEEE
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQG-------IRAVPLHDRKG-----ER-YKSVKLLMHFEF 590 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~G-------yR~vpL~d~~g-----~~-~~~asLlv~i~f 590 (591)
|++..+++++||++.+||+.+..| -+|+||.+..| ++ ...+.|.|+|.|
T Consensus 70 d~~~~~~dd~lG~v~i~L~~l~~~~~~~~~~~~W~~L~~~~~~~~~~k~~k~~g~l~l~i~~ 131 (150)
T cd04019 70 DRVGPNKDEPLGRAVIPLNDIERRVDDRPVPSRWFSLERPGGAMEQKKKRKFASRIHLRLCL 131 (150)
T ss_pred EecCCCCCCeEEEEEEEHHHCcccCCCCccCCceEECcCCCCcccccccCcccccEEEEEEe
Confidence 999877899999999999998654 58999998765 22 345788888876
No 46
>cd08677 C2A_Synaptotagmin-13 C2 domain. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domain
Probab=99.63 E-value=1.3e-15 Score=136.53 Aligned_cols=98 Identities=18% Similarity=0.204 Sum_probs=81.6
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|+|+|+.|++|+. .+.+||||+|.+... ....+++|++++++.||+|||+|.|.|...++ ..|.|
T Consensus 13 ~~~L~V~vikA~~L~~---------~g~sDPYVKv~L~~~-~k~~k~kT~v~rktlnPvfnE~f~F~v~~~~l~~~tL~~ 82 (118)
T cd08677 13 KAELHVNILEAENISV---------DAGCECYISGCVSVS-EGQKEAQTALKKLALHTQWEEELVFPLPEEESLDGTLTL 82 (118)
T ss_pred CCEEEEEEEEecCCCC---------CCCCCeEEEEEEcCC-cCccEEEcceecCCCCCccccEEEEeCCHHHhCCcEEEE
Confidence 4569999999999851 244799999998642 22357799999999999999999999887665 57999
Q ss_pred EEEeccCCCCCCccEEEEEECCcc--CCcceE
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSEL--KQGIRA 568 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL--~~GyR~ 568 (591)
+|||+|..+++++||++.+|++++ ..|.+|
T Consensus 83 ~V~d~Drfs~~d~IG~v~l~l~~~~~~~~~~~ 114 (118)
T cd08677 83 TLRCCDRFSRHSTLGELRLKLADVSMMLGAAQ 114 (118)
T ss_pred EEEeCCCCCCCceEEEEEEccccccCCccccc
Confidence 999999999999999999999975 566654
No 47
>cd08377 C2C_MCTP_PRT C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. The cds in this family contain multiple C2 domains as well as a C-terminal PRT domain. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal tran
Probab=99.63 E-value=6.6e-15 Score=132.02 Aligned_cols=117 Identities=24% Similarity=0.382 Sum_probs=98.6
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEe
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 542 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 542 (591)
.|+|+|++|++|+. .+..+.+||||+|.+.+ .+.+|++++++.||.|||+|.|.+... ...|.|.|||
T Consensus 2 ~l~v~v~~a~~L~~------~~~~~~~dPyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~~~~~~~-~~~l~~~v~d 69 (119)
T cd08377 2 FLQVKVIRASGLAA------ADIGGKSDPFCVLELVN-----ARLQTHTIYKTLNPEWNKIFTFPIKDI-HDVLEVTVYD 69 (119)
T ss_pred EEEEEEEeeeCCCC------CCCCCCCCcEEEEEECC-----EeeecceecCCcCCccCcEEEEEecCc-CCEEEEEEEE
Confidence 58999999999964 23456789999999864 357999999999999999999997542 3579999999
Q ss_pred ccCCCCCCccEEEEEECCccCCcc-eEEEccCCCCCcccCeEEEEEEEEC
Q 007734 543 YDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 543 ~d~~~~dd~lGq~~ipL~sL~~Gy-R~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
++..+++++||++.+|+..+..|. +|.+|.++.+.....++|.+.++||
T Consensus 70 ~~~~~~~~~iG~~~~~l~~~~~~~~~~~~l~~~~~~~~~~G~i~l~~~~~ 119 (119)
T cd08377 70 EDKDKKPEFLGKVAIPLLSIKNGERKWYALKDKKLRTRAKGSILLEMDVI 119 (119)
T ss_pred CCCCCCCceeeEEEEEHHHCCCCCceEEECcccCCCCceeeEEEEEEEeC
Confidence 998778999999999999998774 6889998877766788999999986
No 48
>cd08379 C2D_MCTP_PRT_plant C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate
Probab=99.62 E-value=3.9e-15 Score=135.66 Aligned_cols=113 Identities=24% Similarity=0.322 Sum_probs=89.9
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|.|+|++|++++.- ...+..+.+||||.|.+.+ .+.||++++++.||+|||+|.|.+..++ ..|.|.|||+
T Consensus 2 L~v~v~~A~~~~~l---~~~d~~g~sDPYv~i~~g~-----~~~rTk~~~~~~nP~WnE~f~f~v~~~~-~~l~v~V~d~ 72 (126)
T cd08379 2 LEVGILGAQGLDVL---RAKDGRGSTDAYCVAKYGP-----KWVRTRTVEDSSNPRWNEQYTWPVYDPC-TVLTVGVFDN 72 (126)
T ss_pred eEEEEEEeECCccc---cccccCCCCCeeEEEEECC-----EEeEcCcccCCCCCcceeEEEEEecCCC-CEEEEEEEEC
Confidence 89999999994210 1135567899999999743 5779999999999999999999987654 4799999999
Q ss_pred cCCC------CCCccEEEEEECCccCCcc---eEEEccCCCCCcc-cCeEEE
Q 007734 544 DMSE------KDDFGGQTCLPVSELKQGI---RAVPLHDRKGERY-KSVKLL 585 (591)
Q Consensus 544 d~~~------~dd~lGq~~ipL~sL~~Gy---R~vpL~d~~g~~~-~~asLl 585 (591)
+..+ ++++||++.+||+.+..|. +++||.+.+++.. ..+.|-
T Consensus 73 d~~~~~~~~~~dd~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~g~l~ 124 (126)
T cd08379 73 SQSHWKEAVQPDVLIGKVRIRLSTLEDDRVYAHSYPLLSLNPSGVKKMGELE 124 (126)
T ss_pred CCccccccCCCCceEEEEEEEHHHccCCCEEeeEEEeEeCCCCCccCCcEEE
Confidence 8763 7999999999999999885 4899997765543 444553
No 49
>cd04022 C2A_MCTP_PRT_plant C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates
Probab=99.62 E-value=4.1e-15 Score=135.46 Aligned_cols=117 Identities=21% Similarity=0.263 Sum_probs=92.9
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCC---ccEEEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRIE 539 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pe---la~Lrf~ 539 (591)
+|+|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+..++ ...|+|.
T Consensus 1 ~L~V~vi~A~~L~~------~d~~g~~dpyv~v~~~~-----~~~rT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l~~~ 69 (127)
T cd04022 1 KLVVEVVDAQDLMP------KDGQGSSSAYVELDFDG-----QKKRTRTKPKDLNPVWNEKLVFNVSDPSRLSNLVLEVY 69 (127)
T ss_pred CeEEEEEEeeCCCC------CCCCCCcCcEEEEEECC-----EEecceeEcCCCCCccceEEEEEccCHHHccCCeEEEE
Confidence 48999999999964 23346789999999865 5679999999999999999999987543 2579999
Q ss_pred EEeccCCC-CCCccEEEEEECCccC-Cc---ceEEEccCCCCCcccCeEEEEEEEE
Q 007734 540 VHEYDMSE-KDDFGGQTCLPVSELK-QG---IRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 540 V~D~d~~~-~dd~lGq~~ipL~sL~-~G---yR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
|||.+... +++|||++.+|++.+. .| .+|.+|..+.......+.|.+++.|
T Consensus 70 V~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 125 (127)
T cd04022 70 VYNDRRSGRRRSFLGRVRISGTSFVPPSEAVVQRYPLEKRGLFSRVRGEIGLKVYI 125 (127)
T ss_pred EeeCCCCcCCCCeeeEEEEcHHHcCCCCCccceEeEeeeCCCCCCccEEEEEEEEE
Confidence 99988765 7999999999999986 44 5788997643222345688888775
No 50
>cd04015 C2_plant_PLD C2 domain present in plant phospholipase D (PLD). PLD hydrolyzes terminal phosphodiester bonds in diester glycerophospholipids resulting in the degradation of phospholipids. In vitro PLD transfers phosphatidic acid to primary alcohols. In plants PLD plays a role in germination, seedling growth, phosphatidylinositol metabolism, and changes in phospholipid composition. There is a single Ca(2+)/phospholipid-binding C2 domain in PLD. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins whic
Probab=99.62 E-value=8.4e-15 Score=138.80 Aligned_cols=125 Identities=25% Similarity=0.382 Sum_probs=100.0
Q ss_pred ceeEEEEEEeccccCcCCCC----------------C--------ccCCCCCCCceEEEEEeccCCCceeeeccccCCCC
Q 007734 461 KKTLKVTVYMGEGWYYDFPH----------------T--------HFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNW 516 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~----------------~--------~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~ 516 (591)
.++|.|+|+.|++|+..... . .....+.+||||+|.+.+ ....||++++++.
T Consensus 6 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~sDPYv~V~l~~----~~~~rT~v~~~~~ 81 (158)
T cd04015 6 HGTLDVTIYEADNLPNMDMFSEKLRRFFSKLVGCSEPTLKRPSSHRHVGKITSDPYATVDLAG----ARVARTRVIENSE 81 (158)
T ss_pred eeeeEEEEEEeccCCCcccccchhhHHHHHHHhhcccccccccccccCCCCCcCeEEEEEECC----eEeeEEEEeCCCC
Confidence 35799999999999741100 0 002346689999999865 2346999999999
Q ss_pred CCccCcEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcc---eEEEccCCCCCccc-CeEEEEEEEEC
Q 007734 517 IPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYK-SVKLLMHFEFI 591 (591)
Q Consensus 517 NPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d~~g~~~~-~asLlv~i~f~ 591 (591)
||+|||+|.|.+..+ ...|.|.|+|+|..+ +++||++.+|++.+..|. +|++|.+..|++.. ++.|.|++.|+
T Consensus 82 nP~WnE~F~~~~~~~-~~~l~~~V~d~d~~~-~~~IG~~~i~l~~l~~g~~~~~w~~L~~~~~~~~~~~~~l~v~~~f~ 158 (158)
T cd04015 82 NPVWNESFHIYCAHY-ASHVEFTVKDNDVVG-AQLIGRAYIPVEDLLSGEPVEGWLPILDSNGKPPKPGAKIRVSLQFT 158 (158)
T ss_pred CCccceEEEEEccCC-CCEEEEEEEeCCCcC-CcEEEEEEEEhHHccCCCCcceEEECcCCCCCCCCCCCEEEEEEEEC
Confidence 999999999988654 357999999999765 689999999999998775 68999999999875 48999999985
No 51
>cd04029 C2A_SLP-4_5 C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp4/granuphilin promotes dense-core vesicle exocytosis. The C2A domain of Slp4 is Ca2+ dependent. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2
Probab=99.61 E-value=4.5e-15 Score=135.12 Aligned_cols=107 Identities=21% Similarity=0.352 Sum_probs=85.9
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|++|++|+.. . ...+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~Vi~a~~L~~~---~--~~~~~~DpyVkv~l~p~~~~~~~~kT~v~~~t~nP~wnE~f~f~i~~~~l~~~~L~~ 88 (125)
T cd04029 14 TQSLNVHVKECRNLAYG---D--EAKKRSNPYVKTYLLPDKSRQSKRKTSIKRNTTNPVYNETLKYSISHSQLETRTLQL 88 (125)
T ss_pred CCeEEEEEEEecCCCcc---C--CCCCCCCcEEEEEEEcCCccccceEeeeeeCCCCCcccceEEEECCHHHhCCCEEEE
Confidence 35699999999999641 1 12367899999999654333456799999999999999999999875544 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc---ceEEEcc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLH 572 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~G---yR~vpL~ 572 (591)
.|||+|..+++++||++.++|+++... -.|+||.
T Consensus 89 ~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~~~w~~l~ 125 (125)
T cd04029 89 SVWHYDRFGRNTFLGEVEIPLDSWNFDSQHEECLPLH 125 (125)
T ss_pred EEEECCCCCCCcEEEEEEEeCCcccccCCcccEEECc
Confidence 999999888899999999999998543 4688873
No 52
>cd08406 C2B_Synaptotagmin-12 C2 domain second repeat present in Synaptotagmin 12. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 12, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 13, do not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycl
Probab=99.61 E-value=2.1e-15 Score=139.37 Aligned_cols=112 Identities=19% Similarity=0.174 Sum_probs=90.6
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|+.|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 14 ~~~L~V~Vi~A~nL~~------~~~~g~~DpyVkv~l~~~~~~~~k~kT~v~k~t~nP~~nE~f~F~v~~~~l~~~~l~~ 87 (136)
T cd08406 14 AERLTVVVVKARNLVW------DNGKTTADPFVKVYLLQDGRKISKKKTSVKRDDTNPIFNEAMIFSVPAIVLQDLSLRV 87 (136)
T ss_pred CCEEEEEEEEeeCCCC------ccCCCCCCeEEEEEEEeCCccccccCCccccCCCCCeeceeEEEECCHHHhCCcEEEE
Confidence 3469999999999964 234567899999999865544457799999999999999999999875544 67999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcceE-EEccCCCCCc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGIRA-VPLHDRKGER 578 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~GyR~-vpL~d~~g~~ 578 (591)
+|+|+|..+++++||++.|+..+..+|++| ..+++.-+++
T Consensus 88 ~V~~~d~~~~~~~iG~v~lg~~~~g~~~~hW~~ml~~~~~~ 128 (136)
T cd08406 88 TVAESTEDGKTPNVGHVIIGPAASGMGLSHWNQMLASLRKP 128 (136)
T ss_pred EEEeCCCCCCCCeeEEEEECCCCCChhHHHHHHHHHCCCCe
Confidence 999999888899999999998888778765 3555544554
No 53
>cd04010 C2B_RasA3 C2 domain second repeat present in RAS p21 protein activator 3 (RasA3). RasA3 are members of GTPase activating protein 1 (GAP1), a Ras-specific GAP, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA3 contains an N-terminal C2 domain, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain
Probab=99.60 E-value=6.2e-15 Score=138.07 Aligned_cols=108 Identities=23% Similarity=0.276 Sum_probs=88.9
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeec-----------C
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-----------P 531 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~-----------p 531 (591)
+|.|+|+.|++|+. ..+.+||||+|.+.+......++||++++++.||+|||+|.|.+.. +
T Consensus 1 kL~V~Vi~ArnL~~--------~~g~sDPYV~V~l~~~~~k~~~~kT~v~~~t~nP~wNE~F~F~v~~~~~~~~~~~~~~ 72 (148)
T cd04010 1 KLSVRVIECSDLAL--------KNGTCDPYASVTLIYSNKKQDTKRTKVKKKTNNPQFDEAFYFDVTIDSSPEKKQFEMP 72 (148)
T ss_pred CEEEEEEeCcCCCC--------CCCCCCceEEEEEeCCcccCcccCCccEeCCCCCccceEEEEEEecccccccccccCC
Confidence 48999999999953 2356899999999876555567899999999999999999999851 1
Q ss_pred --C--ccEEEEEEEeccCCCCCCccEEEEEECCccCCc----ceEEEccCCCCCc
Q 007734 532 --E--LALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG----IRAVPLHDRKGER 578 (591)
Q Consensus 532 --e--la~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~G----yR~vpL~d~~g~~ 578 (591)
+ ...|.|.|||.+..++++|||++.|||..|..+ -.|.+|.+.....
T Consensus 73 ~~~~~~~~L~i~V~d~~~~~~ddfLG~v~i~l~~l~~~~~~~~~W~~L~~~~~~~ 127 (148)
T cd04010 73 EEDAEKLELRVDLWHASMGGGDVFLGEVRIPLRGLDLQAGSHQAWYFLQPREEKS 127 (148)
T ss_pred cccccEEEEEEEEEcCCCCCCCceeEEEEEecccccccCCcCcceeecCCccccc
Confidence 2 357999999999877899999999999999876 3688997765554
No 54
>cd08393 C2A_SLP-1_2 C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike Slp3 and Slp4/granuphilin which are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety
Probab=99.60 E-value=6.2e-15 Score=134.15 Aligned_cols=104 Identities=19% Similarity=0.241 Sum_probs=84.9
Q ss_pred eeEEEEEEeccccCcCCCCCccCCC-CCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~-~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
..|.|+|+.|++|+. .+.. +.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 15 ~~L~V~vi~a~~L~~------~d~~~g~~dpyVkv~l~p~~~~~~~~kT~v~~~t~nP~~nE~f~f~v~~~~l~~~~L~~ 88 (125)
T cd08393 15 RELHVHVIQCQDLAA------ADPKKQRSDPYVKTYLLPDKSNRGKRKTSVKKKTLNPVFNETLRYKVEREELPTRVLNL 88 (125)
T ss_pred CEEEEEEEEeCCCCC------cCCCCCCCCcEEEEEEEcCCCccccccCccCcCCCCCccCceEEEECCHHHhCCCEEEE
Confidence 469999999999964 1222 56899999999765554567899999999999999999999865443 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc---ceEEEc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPL 571 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~G---yR~vpL 571 (591)
.|||+|..+++++||++.+||..+..+ -.|.+|
T Consensus 89 ~V~d~~~~~~~~~iG~~~i~L~~~~~~~~~~~W~~L 124 (125)
T cd08393 89 SVWHRDSLGRNSFLGEVEVDLGSWDWSNTQPTWYPL 124 (125)
T ss_pred EEEeCCCCCCCcEeEEEEEecCccccCCCCcceEEC
Confidence 999999888899999999999998654 246665
No 55
>cd04028 C2B_RIM1alpha C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins. RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as
Probab=99.59 E-value=1.2e-14 Score=135.65 Aligned_cols=108 Identities=21% Similarity=0.223 Sum_probs=87.6
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
..|.|+|+.|++|+.. .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+. .....|.|.||
T Consensus 29 ~~L~V~Vi~ArnL~~~-----~~~~g~sDPYVKv~Llp~~~~~~k~KT~v~kktlnPvfNE~F~f~v~-l~~~~L~v~V~ 102 (146)
T cd04028 29 GQLEVEVIRARGLVQK-----PGSKVLPAPYVKVYLLEGKKCIAKKKTKIARKTLDPLYQQQLVFDVS-PTGKTLQVIVW 102 (146)
T ss_pred CEEEEEEEEeeCCCcc-----cCCCCCcCCeEEEEEECCCccccceeceecCCCCCCccCCeEEEEEc-CCCCEEEEEEE
Confidence 4599999999999531 12346789999999986544445889999999999999999999997 45568999999
Q ss_pred -eccCCCCCCccEEEEEECCccCCcc---eEEEccCCC
Q 007734 542 -EYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRK 575 (591)
Q Consensus 542 -D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d~~ 575 (591)
|++...++++||++.|+|+.+..+. .|.+|.++.
T Consensus 103 ~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~Wy~L~~~~ 140 (146)
T cd04028 103 GDYGRMDKKVFMGVAQILLDDLDLSNLVIGWYKLFPTS 140 (146)
T ss_pred eCCCCCCCCceEEEEEEEcccccCCCCceeEEecCCcc
Confidence 5777778999999999999996553 678888643
No 56
>cd08392 C2A_SLP-3 C2 domain first repeat present in Synaptotagmin-like protein 3. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. Little is known about the expression or localization of Slp3. The C2A domain of Slp3 is Ca2+ dependent. It has been demonstrated that Slp3 promotes dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids
Probab=99.59 E-value=8.2e-15 Score=134.03 Aligned_cols=104 Identities=18% Similarity=0.241 Sum_probs=85.8
Q ss_pred eeEEEEEEeccccCcCCCCCccCC-CCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDA-YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~-~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
..|.|+|+.|++|+. .+. .+.+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 15 ~~L~V~V~~a~nL~~------~d~~~g~~dpYVkv~llp~~~~~~k~kT~v~~~t~nPvfNE~F~f~v~~~~l~~~~L~v 88 (128)
T cd08392 15 SCLEITIKACRNLAY------GDEKKKKCHPYVKVCLLPDKSHNSKRKTAVKKGTVNPVFNETLKYVVEADLLSSRQLQV 88 (128)
T ss_pred CEEEEEEEecCCCCc------cCCCCCCCCeEEEEEEEeCCcccceeecccccCCCCCccceEEEEEcCHHHhCCcEEEE
Confidence 569999999999964 122 267899999999866555668899999999999999999999866544 58999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc------ceEEEc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQG------IRAVPL 571 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~G------yR~vpL 571 (591)
.|||.+..+++++||++.|||+.+.-. .+|.||
T Consensus 89 ~V~~~~~~~~~~~lG~~~i~L~~~~~~~~~~~~~~W~~l 127 (128)
T cd08392 89 SVWHSRTLKRRVFLGEVLIPLADWDFEDTDSQRFLWYPL 127 (128)
T ss_pred EEEeCCCCcCcceEEEEEEEcCCcccCCCCccccceEEC
Confidence 999999888899999999999988532 467776
No 57
>cd04033 C2_NEDD4_NEDD4L C2 domain present in the Human neural precursor cell-expressed, developmentally down-regulated 4 (NEDD4) and NEDD4-like (NEDD4L/NEDD42). Nedd4 and Nedd4-2 are two of the nine members of the Human Nedd4 family. All vertebrates appear to have both Nedd4 and Nedd4-2 genes. They are thought to participate in the regulation of epithelial Na+ channel (ENaC) activity. They also have identical specificity for ubiquitin conjugating enzymes (E2). Nedd4 and Nedd4-2 are composed of a C2 domain, 2-4 WW domains, and a ubiquitin ligase Hect domain. Their WW domains can bind PPxY (PY) or LPSY motifs, and in vitro studies suggest that WW3 and WW4 of both proteins bind PY motifs in the key substrates, with WW3 generally exhibiting higher affinity. Most Nedd4 family members, especially Nedd4-2, also have multiple splice variants, which might play different roles in regulating their substrates. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.59 E-value=1.4e-14 Score=132.68 Aligned_cols=122 Identities=25% Similarity=0.370 Sum_probs=96.1
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccC-C-CceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP-A-DTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p-~-d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V 540 (591)
.|+|+|++|++|+. .+..+.+||||+|.+.+.. . ...+.+|++++++.||+|||+|.|.+... ...|.|.|
T Consensus 1 ~L~v~Vi~a~~L~~------~d~~~~~Dpyv~v~~~~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~~~v 73 (133)
T cd04033 1 ILRVKVLAGIDLAK------KDIFGASDPYVKISLYDPDGNGEIDSVQTKTIKKTLNPKWNEEFFFRVNPR-EHRLLFEV 73 (133)
T ss_pred CEEEEEEEeECCCc------ccCCCCcCcEEEEEEECCCCCCcccceeeeEEcCCCCCcEeeEEEEEEcCC-CCEEEEEE
Confidence 38999999999964 2345678999999998642 1 22356899999999999999999998643 45789999
Q ss_pred EeccCCCCCCccEEEEEECCccCCc---------ceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 541 HEYDMSEKDDFGGQTCLPVSELKQG---------IRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 541 ~D~d~~~~dd~lGq~~ipL~sL~~G---------yR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
||++..+++++||++.++++++..+ -.|.+|....+..-..+.|.+.+.|.
T Consensus 74 ~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~G~l~~~~~~~ 133 (133)
T cd04033 74 FDENRLTRDDFLGQVEVPLNNLPTETPGNERRYTFKDYLLRPRSSKSRVKGHLRLYMAYL 133 (133)
T ss_pred EECCCCCCCCeeEEEEEEHHHCCCcCccccccccchheeeeecCCCCcceeEEEEEEeeC
Confidence 9999888899999999999998643 26788876544434567999999874
No 58
>cd04041 C2A_fungal C2 domain first repeat; fungal group. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligan
Probab=99.57 E-value=7.8e-15 Score=130.57 Aligned_cols=102 Identities=19% Similarity=0.170 Sum_probs=85.5
Q ss_pred eEEEEEEeccccCcCCCCCccCCC-CCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCC---ccEEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRI 538 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~-~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pe---la~Lrf 538 (591)
.|+|+|++|++|+. .+.. +.+||||+|.+.+.. ....||++++++.||+|||+|.|.+..++ ...|.|
T Consensus 2 ~L~V~v~~a~~L~~------~d~~~~~~Dpyv~v~~~~~~--~~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l~~ 73 (111)
T cd04041 2 VLVVTIHRATDLPK------ADFGTGSSDPYVTASFAKFG--KPLYSTRIIRKDLNPVWEETWFVLVTPDEVKAGERLSC 73 (111)
T ss_pred EEEEEEEEeeCCCc------ccCCCCCCCccEEEEEccCC--CccEeeeeECCCCCCccceeEEEEeCchhccCCCEEEE
Confidence 68999999999964 2334 678999999986532 34679999999999999999999887653 358999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcceEEEcc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLH 572 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~GyR~vpL~ 572 (591)
.|||+|..+++++||++.++++.|.+--+|.||+
T Consensus 74 ~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~ 107 (111)
T cd04041 74 RLWDSDRFTADDRLGRVEIDLKELIEDRNWMGRR 107 (111)
T ss_pred EEEeCCCCCCCCcceEEEEEHHHHhcCCCCCccc
Confidence 9999998888999999999999998777888875
No 59
>cd08376 C2B_MCTP_PRT C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protei
Probab=99.57 E-value=3.2e-14 Score=127.15 Aligned_cols=110 Identities=24% Similarity=0.364 Sum_probs=90.6
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|+|+|++|++|+. .+..+.+||||++.+.+ .+.||++++++.||.|||+|.|.+..+....|.|.|||+
T Consensus 2 ~~V~v~~a~~L~~------~~~~~~~dPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~v~v~d~ 70 (116)
T cd08376 2 VTIVLVEGKNLPP------MDDNGLSDPYVKFRLGN-----EKYKSKVCSKTLNPQWLEQFDLHLFDDQSQILEIEVWDK 70 (116)
T ss_pred EEEEEEEEECCCC------CCCCCCCCcEEEEEECC-----EeEecccccCCCCCceeEEEEEEecCCCCCEEEEEEEEC
Confidence 7899999999964 23346789999999853 568999999999999999999998766567899999999
Q ss_pred cCCCCCCccEEEEEECCccCCcc---eEEEccCCCCCcccCeEEEEEEEE
Q 007734 544 DMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d~~g~~~~~asLlv~i~f 590 (591)
+..+++++||++.++|+.+..+- .|++|.+. .+.|++++.+
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~~------~G~~~~~~~~ 114 (116)
T cd08376 71 DTGKKDEFIGRCEIDLSALPREQTHSLELELEDG------EGSLLLLLTL 114 (116)
T ss_pred CCCCCCCeEEEEEEeHHHCCCCCceEEEEEccCC------CcEEEEEEEe
Confidence 98888999999999999987653 46788754 2567777665
No 60
>cd04039 C2_PSD C2 domain present in Phosphatidylserine decarboxylase (PSD). PSD is involved in the biosynthesis of aminophospholipid by converting phosphatidylserine (PtdSer) to phosphatidylethanolamine (PtdEtn). There is a single C2 domain present and it is thought to confer PtdSer binding motif that is common to PKC and synaptotagmin. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM
Probab=99.57 E-value=1.3e-14 Score=128.83 Aligned_cols=97 Identities=14% Similarity=0.059 Sum_probs=79.0
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc-cEEEEEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEVH 541 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel-a~Lrf~V~ 541 (591)
.|.|+|++|++|+... ........+||||+|.+.+ .++||++++++.||+|||+|.|.+...+. ..|.|.||
T Consensus 2 ~l~v~v~~A~~L~~~~--~~~~~~~~~DPYv~v~~~~-----~~~kT~v~~~t~nPvWne~f~f~v~~~~~~~~L~~~V~ 74 (108)
T cd04039 2 VVFMEIKSITDLPPLK--NMTRTGFDMDPFVIISFGR-----RVFRTSWRRHTLNPVFNERLAFEVYPHEKNFDIQFKVL 74 (108)
T ss_pred EEEEEEEeeeCCCCcc--ccCCCCCccCceEEEEECC-----EeEeeeeecCCCCCcccceEEEEEeCccCCCEEEEEEE
Confidence 5899999999996411 0011123579999999742 56799999999999999999999876554 47999999
Q ss_pred eccCCCCCCccEEEEEECCccCCcc
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQGI 566 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~Gy 566 (591)
|+|..+++++||++.++|+.|..|+
T Consensus 75 D~d~~~~dd~IG~~~l~L~~l~~~~ 99 (108)
T cd04039 75 DKDKFSFNDYVATGSLSVQELLNAA 99 (108)
T ss_pred ECCCCCCCcceEEEEEEHHHHHhhC
Confidence 9998888999999999999998776
No 61
>cd08681 C2_fungal_Inn1p-like C2 domain found in fungal Ingression 1 (Inn1) proteins. Saccharomyces cerevisiae Inn1 associates with the contractile actomyosin ring at the end of mitosis and is needed for cytokinesis. The C2 domain of Inn1, located at the N-terminus, is required for ingression of the plasma membrane. The C-terminus is relatively unstructured and contains eight PXXP motifs that are thought to mediate interaction of Inn1 with other proteins with SH3 domains in the cytokinesis proteins Hof1 (an F-BAR protein) and Cyk3 (whose overexpression can restore primary septum formation in Inn1Delta cells) as well as recruiting Inn1 to the bud-neck by binding to Cyk3. Inn1 and Cyk3 appear to cooperate in activating chitin synthase Chs2 for primary septum formation, which allows coordination of actomyosin ring contraction with ingression of the cleavage furrow. It is thought that the C2 domain of Inn1 helps to preserve the link between the actomyosin ring and the plasma membrane, contr
Probab=99.57 E-value=2.3e-14 Score=128.51 Aligned_cols=113 Identities=27% Similarity=0.324 Sum_probs=91.2
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCC-CCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~n-n~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
.|+|+|++|++|+. .+..+.+||||+|.+.+ .++||+++.+ +.||+|||+|.|.+..+....|.|.||
T Consensus 2 ~L~V~v~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~~l~i~v~ 70 (118)
T cd08681 2 TLVVVVLKARNLPN------KRKLDKQDPYCVLRIGG-----VTKKTKTDFRGGQHPEWDEELRFEITEDKKPILKVAVF 70 (118)
T ss_pred EEEEEEEEccCCCC------CCcCCCCCceEEEEECC-----CccccccccCCCCCCccCceEEEEecCCCCCEEEEEEE
Confidence 59999999999964 24457789999999864 4678988755 689999999999998766678999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc---ceEEEccCCCCCcccCeEEEEEEEE
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~G---yR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
|++..+ +++||++.++++.+..| -.|.+|.+ .|+ ..+.|.+++.|
T Consensus 71 d~~~~~-~~~iG~~~~~l~~~~~~~~~~~w~~L~~-~~~--~~G~i~l~l~f 118 (118)
T cd08681 71 DDDKRK-PDLIGDTEVDLSPALKEGEFDDWYELTL-KGR--YAGEVYLELTF 118 (118)
T ss_pred eCCCCC-CcceEEEEEecHHHhhcCCCCCcEEecc-CCc--EeeEEEEEEEC
Confidence 998766 89999999999987554 46788875 343 34688888775
No 62
>cd08692 C2B_Tac2-N C2 domain second repeat found in Tac2-N (Tandem C2 protein in Nucleus). Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polypho
Probab=99.57 E-value=1.2e-14 Score=133.36 Aligned_cols=113 Identities=13% Similarity=0.204 Sum_probs=87.5
Q ss_pred CceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCC-CCccCcEEEEeeecCCcc-EEE
Q 007734 460 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNW-IPSWNEEFEFPLSVPELA-LLR 537 (591)
Q Consensus 460 ~~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~-NPvWNEtf~F~v~~pela-~Lr 537 (591)
....|+|+|+.|++|+. .+..+.+||||+|.+.+.+.+..++||++++++. ||+|||+|.|+|..++.. .|.
T Consensus 12 ~~~rLtV~VikarnL~~------~~~~~~~dpYVKV~L~~~~k~~~KkKT~v~k~t~~~P~fNEsF~Fdv~~~~~~v~l~ 85 (135)
T cd08692 12 VNSRIQLQILEAQNLPS------SSTPLTLSFFVKVGMFSTGGLLYKKKTRLVKSSNGQVKWGETMIFPVTQQEHGIQFL 85 (135)
T ss_pred cCCeEEEEEEEccCCCc------ccCCCCCCcEEEEEEEECCCcceeecCccEECCCCCceecceEEEeCCchhheeEEE
Confidence 44569999999999964 1223456999999999888887889999999995 699999999999876553 678
Q ss_pred EEEEeccCCCCCCccEEEEEECCccC-CcceE-EEccCCCCCc
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELK-QGIRA-VPLHDRKGER 578 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~-~GyR~-vpL~d~~g~~ 578 (591)
+.|||+|..+++++||++.++.++.. .|.+| -.+++.-+++
T Consensus 86 v~v~d~~~~~~n~~IG~v~lG~~~~~~~~~~hW~~m~~~pr~~ 128 (135)
T cd08692 86 IKLYSRSSVRRKHFLGQVWISSDSSSSEAVEQWKDTIANPEKV 128 (135)
T ss_pred EEEEeCCCCcCCceEEEEEECCccCCchhhhhHHHHHhCCCCe
Confidence 88999988788999999999998753 34443 3444433333
No 63
>cd08378 C2B_MCTP_PRT_plant C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate
Probab=99.57 E-value=3.3e-14 Score=128.70 Aligned_cols=110 Identities=29% Similarity=0.411 Sum_probs=92.5
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|.|+|++|++|+.. .+||||+|.+.+ .+.||++++++.||+|||+|.|.+..+....|.|.|||+
T Consensus 2 L~V~Vi~a~~L~~~----------~~Dpyv~v~l~~-----~~~kT~v~~~t~nP~Wne~F~f~~~~~~~~~L~~~v~d~ 66 (121)
T cd08378 2 LYVRVVKARGLPAN----------SNDPVVEVKLGN-----YKGSTKAIERTSNPEWNQVFAFSKDRLQGSTLEVSVWDK 66 (121)
T ss_pred EEEEEEEecCCCcc----------cCCCEEEEEECC-----ccccccccCCCCCCccceEEEEEcCCCcCCEEEEEEEeC
Confidence 88999999999531 579999999853 467999999999999999999998766667899999999
Q ss_pred cCCCCCCccEEEEEECCccCC--------cceEEEccCCCCCcccCeEEEEEEEE
Q 007734 544 DMSEKDDFGGQTCLPVSELKQ--------GIRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~~--------GyR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
|.. ++++||++.++|+.+.. ..+|.+|.+..+.. ..+.|.+.|.|
T Consensus 67 d~~-~~~~lG~~~i~l~~l~~~~~~~~~~~~~W~~L~~~~~~~-~~G~i~l~~~~ 119 (121)
T cd08378 67 DKA-KDDFLGGVCFDLSEVPTRVPPDSPLAPQWYRLEDKKGGR-VGGELMLAVWF 119 (121)
T ss_pred CCC-cCceeeeEEEEhHhCcCCCCCCCCCCcceEEccCCCCCc-cceEEEEEEEe
Confidence 866 68999999999999854 24899999887743 34688888887
No 64
>cd08400 C2_Ras_p21A1 C2 domain present in RAS p21 protein activator 1 (RasA1). RasA1 is a GAP1 (GTPase activating protein 1), a Ras-specific GAP member, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA1 contains a C2 domain, a Ras-GAP domain, a pleckstrin homology (PH)-like domain, a SH3 domain, and 2 SH2 domains. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficki
Probab=99.56 E-value=5.9e-14 Score=127.89 Aligned_cols=115 Identities=19% Similarity=0.275 Sum_probs=92.1
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
..|+|+|++|++|+.. +.+||||+|.+.+ ....||++. ++.||+|||+|.|.+..+++..+.|.|+
T Consensus 4 ~~L~V~Vi~A~~L~~~---------~~~DPYv~v~l~~----~~~~kT~v~-~~~nP~WnE~f~f~~~~~~~~~l~v~v~ 69 (126)
T cd08400 4 RSLQLNVLEAHKLPVK---------HVPHPYCVISLNE----VKVARTKVR-EGPNPVWSEEFVFDDLPPDVNSFTISLS 69 (126)
T ss_pred eEEEEEEEEeeCCCCC---------CCCCeeEEEEECC----EeEEEeecC-CCCCCccCCEEEEecCCCCcCEEEEEEE
Confidence 3599999999999631 2479999999954 234688874 5799999999999977666667889999
Q ss_pred eccCCCCCCccEEEEEECCccCCcc---eEEEccCCCC-CcccCeEEEEEEEE
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKG-ERYKSVKLLMHFEF 590 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d~~g-~~~~~asLlv~i~f 590 (591)
|++..+++++||++.+||..+..|. .|.+|....+ ..-..+.|.+++.|
T Consensus 70 d~~~~~~d~~iG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~~~~G~i~l~l~~ 122 (126)
T cd08400 70 NKAKRSKDSEIAEVTVQLSKLQNGQETDEWYPLSSASPLKGGEWGSLRIRARY 122 (126)
T ss_pred ECCCCCCCCeEEEEEEEHhHccCCCcccEeEEcccCCCCCCCcCcEEEEEEEE
Confidence 9998888999999999999998886 5889976543 22345688888877
No 65
>cd04031 C2A_RIM1alpha C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins. RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as
Probab=99.55 E-value=4e-14 Score=128.02 Aligned_cols=105 Identities=24% Similarity=0.338 Sum_probs=83.9
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeec-C--CccEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-P--ELALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~-p--ela~Lr 537 (591)
...|.|+|++|++|+. .+..+.+||||+|.+.+...+..++||++++++.||+|||+|.|.+.. . ....|+
T Consensus 15 ~~~L~V~vi~a~~L~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~l~~~~l~ 88 (125)
T cd04031 15 TSQLIVTVLQARDLPP------RDDGSLRNPYVKVYLLPDRSEKSKRRTKTVKKTLNPEWNQTFEYSNVRRETLKERTLE 88 (125)
T ss_pred CCEEEEEEEEecCCCC------cCCCCCCCCEEEEEEccCCCccccccccccCCCCCCccccEEEEcccCHHHhCCCEEE
Confidence 4569999999999954 233467899999999765555567899999999999999999998643 2 236899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccC--CcceEEEc
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELK--QGIRAVPL 571 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~--~GyR~vpL 571 (591)
|.|||++..+++++||++.++|+... .+-.|.+|
T Consensus 89 ~~V~d~~~~~~~~~iG~~~i~l~~~~~~~~~~W~~L 124 (125)
T cd04031 89 VTVWDYDRDGENDFLGEVVIDLADALLDDEPHWYPL 124 (125)
T ss_pred EEEEeCCCCCCCcEeeEEEEecccccccCCcceEEC
Confidence 99999998888999999999999732 23456666
No 66
>cd08678 C2_C21orf25-like C2 domain found in the Human chromosome 21 open reading frame 25 (C21orf25) protein. The members in this cd are named after the Human C21orf25 which contains a single C2 domain. Several other members contain a C1 domain downstream of the C2 domain. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a
Probab=99.55 E-value=7.8e-14 Score=126.89 Aligned_cols=116 Identities=24% Similarity=0.319 Sum_probs=92.7
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|.|+|++|++|+. ..+.+||||.+.+.+ ...++||+++.++.||+|||+|.|.+.. +...|.|.|||+
T Consensus 1 l~v~v~~A~~L~~--------~~g~~dpyv~v~~~~---~~~~~kT~v~~~t~nP~Wne~f~f~~~~-~~~~l~~~v~d~ 68 (126)
T cd08678 1 LLVKNIKANGLSE--------AAGSSNPYCVLEMDE---PPQKYQSSTQKNTSNPFWDEHFLFELSP-NSKELLFEVYDN 68 (126)
T ss_pred CEEEEEEecCCCC--------CCCCcCCEEEEEECC---CCcEEEeEEEecCCCCccCceEEEEeCC-CCCEEEEEEEEC
Confidence 5799999999852 346789999999852 1246799999999999999999999853 346799999999
Q ss_pred cCCCCCCccEEEEEECCccCCc---ceEEEccCCCCC-cccCeEEEEEEEEC
Q 007734 544 DMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGE-RYKSVKLLMHFEFI 591 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~~G---yR~vpL~d~~g~-~~~~asLlv~i~f~ 591 (591)
+..+++++||++.++++.|..+ -.++||....++ .-..++|.+.+.|+
T Consensus 69 ~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~G~l~l~~~~~ 120 (126)
T cd08678 69 GKKSDSKFLGLAIVPFDELRKNPSGRQIFPLQGRPYEGDSVSGSITVEFLFM 120 (126)
T ss_pred CCCCCCceEEEEEEeHHHhccCCceeEEEEecCCCCCCCCcceEEEEEEEEe
Confidence 9888899999999999998754 356788765443 23457999998874
No 67
>cd08375 C2_Intersectin C2 domain present in Intersectin. A single instance of the C2 domain is located C terminally in the intersectin protein. Intersectin functions as a scaffolding protein, providing a link between the actin cytoskeleton and the components of endocytosis and plays a role in signal transduction. In addition to C2, intersectin contains several additional domains including: Eps15 homology domains, SH3 domains, a RhoGEF domain, and a PH domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking pro
Probab=99.54 E-value=6.1e-14 Score=129.64 Aligned_cols=114 Identities=25% Similarity=0.394 Sum_probs=90.6
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V 540 (591)
.+.|+|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||.|||+|.|.+..+....|.|.|
T Consensus 14 ~G~L~V~Vi~A~~L~~------~d~~g~~DPYv~v~~~~-----~~~kT~vi~~t~nP~Wne~f~f~v~~~~~~~l~i~V 82 (136)
T cd08375 14 IGRLMVVIVEGRDLKP------CNSNGKSDPYCEVSMGS-----QEHKTKVVSDTLNPKWNSSMQFFVKDLEQDVLCITV 82 (136)
T ss_pred cEEEEEEEEEeeCCCC------CCCCCCcCcEEEEEECC-----EeeeccccCCCCCCccCceEEEEecCccCCEEEEEE
Confidence 3679999999999953 24457899999999742 578999999999999999999999877678899999
Q ss_pred EeccCCCCCCccEEEEEECCccCC------c--ceEEEccCCCCCcccCeEEEEEEEE
Q 007734 541 HEYDMSEKDDFGGQTCLPVSELKQ------G--IRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 541 ~D~d~~~~dd~lGq~~ipL~sL~~------G--yR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
||+|..+++++||++.++|.++.. + +++++|. +. ..+.+.+.+.|
T Consensus 83 ~D~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~---~~--~~g~i~l~~~~ 135 (136)
T cd08375 83 FDRDFFSPDDFLGRTEIRVADILKETKESKGPITKRLLLH---EV--PTGEVVVKLDL 135 (136)
T ss_pred EECCCCCCCCeeEEEEEEHHHhccccccCCCcEEEEeccc---cc--cceeEEEEEEe
Confidence 999988889999999999999864 2 2455653 22 23456666554
No 68
>cd08407 C2B_Synaptotagmin-13 C2 domain second repeat present in Synaptotagmin 13. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recy
Probab=99.54 E-value=1.5e-14 Score=133.80 Aligned_cols=114 Identities=20% Similarity=0.187 Sum_probs=88.0
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|+.|++|+.. ..+..+.+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~V~karnL~~~----d~~~~~~~DpYVKv~l~~~~~k~~kkkT~v~k~t~nPvfNE~f~F~v~~~~L~~~~L~~ 89 (138)
T cd08407 14 ANRLLVVVIKAKNLHSD----QLKLLLGIDVSVKVTLKHQNAKLKKKQTKRAKHKINPVWNEMIMFELPSELLAASSVEL 89 (138)
T ss_pred CCeEEEEEEEecCCCcc----ccCCCCCCCeEEEEEEEcCCcccceeccceeeCCCCCccccEEEEECCHHHhCccEEEE
Confidence 35699999999999641 1112233799999999865444457899999999999999999999876554 57999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcceE-EEccCCCCCc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGIRA-VPLHDRKGER 578 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~GyR~-vpL~d~~g~~ 578 (591)
+|+|+|..+++++||++.+++.+-.++.+| -.+++.-+++
T Consensus 90 ~V~d~d~~~~~d~iG~v~lg~~~~g~~~~hW~~ml~~p~~~ 130 (138)
T cd08407 90 EVLNQDSPGQSLPLGRCSLGLHTSGTERQHWEEMLDNPRRQ 130 (138)
T ss_pred EEEeCCCCcCcceeceEEecCcCCCcHHHHHHHHHhCCCCc
Confidence 999999999999999999999875555543 3555544444
No 69
>cd08680 C2_Kibra C2 domain found in Human protein Kibra. Kibra is thought to be a regulator of the Salvador (Sav)/Warts (Wts)/Hippo (Hpo) (SWH) signaling network, which limits tissue growth by inhibiting cell proliferation and promoting apoptosis. The core of the pathway consists of a MST and LATS family kinase cascade that ultimately phosphorylates and inactivates the YAP/Yorkie (Yki) transcription coactivator. The FERM domain proteins Merlin (Mer) and Expanded (Ex) are part of the upstream regulation controlling pathway mechanism. Kibra colocalizes and associates with Mer and Ex and is thought to transduce an extracellular signal via the SWH network. The apical scaffold machinery that contains Hpo, Wts, and Ex recruits Yki to the apical membrane facilitating its inhibitory phosphorlyation by Wts. Since Kibra associates with Ex and is apically located it is hypothesized that KIBRA is part of the scaffold, helps in the Hpo/Wts complex, and helps recruit Yki for inactivation that prom
Probab=99.54 E-value=3.2e-14 Score=129.44 Aligned_cols=96 Identities=21% Similarity=0.353 Sum_probs=80.3
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCC-ceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d-~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
..|.|+|+.|++|+. .+..+.+||||+|.+...... ..++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 14 ~~L~V~V~~arnL~~------~~~~~~~dpyVKv~Llp~~~~~~~~~kT~v~~~t~nPvfnE~F~f~v~~~~L~~~~L~~ 87 (124)
T cd08680 14 SSLVISVEQLRNLSA------LSIPENSKVYVRVALLPCSSSTSCLFRTKALEDQDKPVFNEVFRVPISSTKLYQKTLQV 87 (124)
T ss_pred CEEEEEEeEecCCcc------cccCCCCCeEEEEEEccCCCCCCceEEcCccCCCCCCccccEEEEECCHHHhhcCEEEE
Confidence 469999999999964 133456899999999754432 357899999999999999999999876655 48999
Q ss_pred EEEeccCCCCCCccEEEEEECCccC
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~ 563 (591)
.||+.+..+++++||++.|+|+.+.
T Consensus 88 ~V~~~~~~~~~~~lG~~~i~L~~~~ 112 (124)
T cd08680 88 DVCSVGPDQQEECLGGAQISLADFE 112 (124)
T ss_pred EEEeCCCCCceeEEEEEEEEhhhcc
Confidence 9999998888999999999999884
No 70
>cd04050 C2B_Synaptotagmin-like C2 domain second repeat present in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm
Probab=99.54 E-value=4.5e-14 Score=124.35 Aligned_cols=96 Identities=27% Similarity=0.362 Sum_probs=82.2
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|.|+|++|++|+. .+..+.+||||+|.+.+ .++||+++.++.||+|||+|.|.+..++...|.|.|+|+
T Consensus 2 L~V~v~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~v~v~d~ 70 (105)
T cd04050 2 LFVYLDSAKNLPL------AKSTKEPSPYVELTVGK-----TTQKSKVKERTNNPVWEEGFTFLVRNPENQELEIEVKDD 70 (105)
T ss_pred EEEEEeeecCCCC------cccCCCCCcEEEEEECC-----EEEeCccccCCCCCcccceEEEEeCCCCCCEEEEEEEEC
Confidence 8899999999964 23346789999999975 678899999999999999999999988888999999998
Q ss_pred cCCCCCCccEEEEEECCccCCc-----ceEEEccC
Q 007734 544 DMSEKDDFGGQTCLPVSELKQG-----IRAVPLHD 573 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~~G-----yR~vpL~d 573 (591)
+. +++||++.++|..|..+ -+|.+|.+
T Consensus 71 ~~---~~~iG~~~i~l~~l~~~~~~~~~~w~~L~~ 102 (105)
T cd04050 71 KT---GKSLGSLTLPLSELLKEPDLTLDQPFPLDN 102 (105)
T ss_pred CC---CCccEEEEEEHHHhhccccceeeeeEecCC
Confidence 74 78999999999998643 36788865
No 71
>cd04040 C2D_Tricalbin-like C2 domain fourth repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.54 E-value=7.1e-14 Score=124.65 Aligned_cols=111 Identities=29% Similarity=0.458 Sum_probs=90.9
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|+|+|++|++++. .+..+.+||||+|.+.+ ...++|+++.++.||+|||+|.|.+.......|.|.|||+
T Consensus 1 l~v~vi~a~~L~~------~~~~~~~dpyv~v~~~~----~~~~~T~v~~~~~~P~Wne~f~~~~~~~~~~~l~~~v~d~ 70 (115)
T cd04040 1 LTVDVISAENLPS------ADRNGKSDPFVKFYLNG----EKVFKTKTIKKTLNPVWNESFEVPVPSRVRAVLKVEVYDW 70 (115)
T ss_pred CEEEEEeeeCCCC------CCCCCCCCCeEEEEECC----CcceeeceecCCCCCcccccEEEEeccCCCCEEEEEEEeC
Confidence 5799999999864 12346689999999865 3457899999999999999999998765567899999999
Q ss_pred cCCCCCCccEEEEEECCccCCc---ceEEEccCCCCCcccCeEEEE
Q 007734 544 DMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLM 586 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~~G---yR~vpL~d~~g~~~~~asLlv 586 (591)
+..+++++||++.+++..+..| .++++|....|.. .+.||+
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~g~~~--~~~~~~ 114 (115)
T cd04040 71 DRGGKDDLLGSAYIDLSDLEPEETTELTLPLDGQGGGK--LGAVFL 114 (115)
T ss_pred CCCCCCCceEEEEEEHHHcCCCCcEEEEEECcCCCCcc--CceEEc
Confidence 9888899999999999999887 6789998766654 345664
No 72
>cd04025 C2B_RasA1_RasA4 C2 domain second repeat present in RasA1 and RasA4. RasA1 and RasA4 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both proteins contain two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such a
Probab=99.53 E-value=9.7e-14 Score=125.53 Aligned_cols=114 Identities=25% Similarity=0.318 Sum_probs=89.6
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|+|+|++|++|+. .+..+.+||||+|.+.+ .+.+|++++++.||+|||+|.|.+..+....|.|.|||+
T Consensus 2 L~v~vi~a~~L~~------~d~~~~~DPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~~~v~d~ 70 (123)
T cd04025 2 LRCHVLEARDLAP------KDRNGTSDPFVRVFYNG-----QTLETSVVKKSCYPRWNEVFEFELMEGADSPLSVEVWDW 70 (123)
T ss_pred EEEEEEEeeCCCC------CCCCCCcCceEEEEECC-----EEEeceeecCCCCCccCcEEEEEcCCCCCCEEEEEEEEC
Confidence 8999999999853 23345789999999854 467899999999999999999998876667899999999
Q ss_pred cCCCCCCccEEEEEECCccCCc---ceEEEccCCCCCc----ccCeEEEEEE
Q 007734 544 DMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGER----YKSVKLLMHF 588 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~~G---yR~vpL~d~~g~~----~~~asLlv~i 588 (591)
+..+++++||++.++|..+..+ ..|..|.....+. -..++|.+.|
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~~G~l~~~~ 122 (123)
T cd04025 71 DLVSKNDFLGKVVFSIQTLQQAKQEEGWFRLLPDPRAEEESGGNLGSLRLKV 122 (123)
T ss_pred CCCCCCcEeEEEEEEHHHcccCCCCCCEEECCCCCCCCccccCceEEEEEEe
Confidence 9888899999999999998654 4577777533221 1235666654
No 73
>cd08404 C2B_Synaptotagmin-4 C2 domain second repeat present in Synaptotagmin 4. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling s
Probab=99.53 E-value=1.7e-14 Score=133.02 Aligned_cols=113 Identities=20% Similarity=0.179 Sum_probs=91.1
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|++|++|+. .+..+.+||||+|.+.+......+.||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~vi~a~~L~~------~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~k~t~nP~w~e~F~f~v~~~~~~~~~l~~ 87 (136)
T cd08404 14 TNRLTVVVLKARHLPK------MDVSGLADPYVKVNLYYGKKRISKKKTHVKKCTLNPVFNESFVFDIPSEELEDISVEF 87 (136)
T ss_pred CCeEEEEEEEeeCCCc------cccCCCCCeEEEEEEEcCCceeeeEcCccccCCCCCccCceEEEECCHHHhCCCEEEE
Confidence 3569999999999964 244577899999999754333456799999999999999999999865443 46899
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcce-EEEccCCCCCcc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGERY 579 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~GyR-~vpL~d~~g~~~ 579 (591)
.|||+|..+++++||++.+++.+...|.+ |..|.+..|+++
T Consensus 88 ~v~d~d~~~~~~~iG~~~~~~~~~~~~~~~w~~l~~~~~~~i 129 (136)
T cd08404 88 LVLDSDRVTKNEVIGRLVLGPKASGSGGHHWKEVCNPPRRQI 129 (136)
T ss_pred EEEECCCCCCCccEEEEEECCcCCCchHHHHHHHHhCCCCee
Confidence 99999988889999999999999666665 456777777765
No 74
>cd08373 C2A_Ferlin C2 domain first repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.53 E-value=1e-13 Score=126.16 Aligned_cols=109 Identities=27% Similarity=0.382 Sum_probs=91.6
Q ss_pred EEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecC--CccEEEEEEEeccC
Q 007734 468 VYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDM 545 (591)
Q Consensus 468 Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~p--ela~Lrf~V~D~d~ 545 (591)
|++|++|+. ..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+..+ +...|.|.|||++.
T Consensus 2 vi~a~~L~~--------~~g~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~Wne~f~f~~~~~~~~~~~l~~~v~d~~~ 68 (127)
T cd08373 2 VVSLKNLPG--------LKGKGDRIAKVTFRG-----VKKKTRVLENELNPVWNETFEWPLAGSPDPDESLEIVVKDYEK 68 (127)
T ss_pred eEEeeCCcc--------cCCCCCCEEEEEECC-----EeeecceeCCCcCCcccceEEEEeCCCcCCCCEEEEEEEECCC
Confidence 678888842 346789999999865 467999999999999999999998654 45789999999998
Q ss_pred CCCCCccEEEEEECCccCCcc---eEEEccCCCCCcccCeEEEEEEEE
Q 007734 546 SEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 546 ~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d~~g~~~~~asLlv~i~f 590 (591)
.+++++||++.++|+.+..+. .++||.+..+.++. +.|.+.+.|
T Consensus 69 ~~~d~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~~~-~~l~l~~~~ 115 (127)
T cd08373 69 VGRNRLIGSATVSLQDLVSEGLLEVTEPLLDSNGRPTG-ATISLEVSY 115 (127)
T ss_pred CCCCceEEEEEEEhhHcccCCceEEEEeCcCCCCCccc-EEEEEEEEE
Confidence 888999999999999988664 47899998888765 688888876
No 75
>cd08385 C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis as do synaptotagmins 5, 6, and 10. It is distinguished from the other synaptotagmins by having an N-glycosylated N-terminus. Synaptotagmins 5, 6, and 10, members of class 3 synaptotagmins, are located primarily in the brain and localized to the active zone and plasma membrane. They is distinguished from the other synaptotagmins by having disulfide bonds at its N-terminus. Synaptotagmin 6 also regulates the acrosome reaction, a unique Ca2+-regulated exocytosis, in sperm. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and
Probab=99.53 E-value=5.7e-14 Score=127.13 Aligned_cols=103 Identities=23% Similarity=0.288 Sum_probs=83.7
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|++|++|+. .+..+.+||||+|.+.+ ....++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 15 ~~~L~V~v~~a~~L~~------~d~~~~~dpyv~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l~~ 86 (124)
T cd08385 15 SNQLTVGIIQAADLPA------MDMGGTSDPYVKVYLLP--DKKKKFETKVHRKTLNPVFNETFTFKVPYSELGNKTLVF 86 (124)
T ss_pred CCEEEEEEEEeeCCCC------ccCCCCCCCEEEEEEEc--CCCCceecccCcCCCCCceeeeEEEeCCHHHhCCCEEEE
Confidence 3569999999999964 23346789999999864 33457799999999999999999999875544 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc---eEEEc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPL 571 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL 571 (591)
.|||+|..+++++||++.+||+.+..|. .|.+|
T Consensus 87 ~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~~~W~~l 122 (124)
T cd08385 87 SVYDFDRFSKHDLIGEVRVPLLTVDLGHVTEEWRDL 122 (124)
T ss_pred EEEeCCCCCCCceeEEEEEecCcccCCCCcceEEEc
Confidence 9999998888999999999999986653 45554
No 76
>cd08688 C2_KIAA0528-like C2 domain found in the Human KIAA0528 cDNA clone. The members of this CD are named after the Human KIAA0528 cDNA clone. All members here contain a single C2 repeat. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/a
Probab=99.52 E-value=4.7e-14 Score=125.33 Aligned_cols=100 Identities=25% Similarity=0.326 Sum_probs=83.7
Q ss_pred EEEEEEeccccCcCCCCCccC-CCCCCCceEEEEEeccCCCceeeeccccCCCCCCcc-CcEEEEeeecCCc--cEEEEE
Q 007734 464 LKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW-NEEFEFPLSVPEL--ALLRIE 539 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d-~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvW-NEtf~F~v~~pel--a~Lrf~ 539 (591)
|+|+|++|++|+. .+ ..+.+||||+|.+.+ .++||++++++.||+| ||+|.|.+..+++ ..|.|.
T Consensus 1 l~V~v~~a~~L~~------~d~~~~~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~W~ne~f~f~i~~~~l~~~~l~i~ 69 (110)
T cd08688 1 LKVRVVAARDLPV------MDRSSDLTDAFVEVKFGS-----TTYKTDVVKKSLNPVWNSEWFRFEVDDEELQDEPLQIR 69 (110)
T ss_pred CEEEEEEEECCCc------cccCCCCCCceEEEEECC-----eeEecceecCCCCCcccCcEEEEEcChHHcCCCeEEEE
Confidence 6799999999964 12 236689999999854 6789999999999999 9999999876654 589999
Q ss_pred EEeccCCCCCCccEEEEEECCccCC---cc---eEEEccCC
Q 007734 540 VHEYDMSEKDDFGGQTCLPVSELKQ---GI---RAVPLHDR 574 (591)
Q Consensus 540 V~D~d~~~~dd~lGq~~ipL~sL~~---Gy---R~vpL~d~ 574 (591)
|||++..+++++||++.++|..|.. +. +|.+|+|.
T Consensus 70 V~d~d~~~~~~~iG~~~~~l~~l~~~~~~~~~~~w~~l~~~ 110 (110)
T cd08688 70 VMDHDTYSANDAIGKVYIDLNPLLLKDSVSQISGWFPIYDT 110 (110)
T ss_pred EEeCCCCCCCCceEEEEEeHHHhcccCCccccCCeEEcccC
Confidence 9999988889999999999999865 33 58888873
No 77
>KOG1030 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only]
Probab=99.52 E-value=2.8e-14 Score=133.33 Aligned_cols=92 Identities=28% Similarity=0.440 Sum_probs=80.6
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
+.|+|+|+.|.+|.. .|..+.+||||.+++.+ ++.||+++.+|+||+|||+|.|.+..+ ...|++.||
T Consensus 6 GLL~v~v~~g~~L~~------rD~~~sSDPyVVl~lg~-----q~lkT~~v~~n~NPeWNe~ltf~v~d~-~~~lkv~Vy 73 (168)
T KOG1030|consen 6 GLLRVRVKRGKNLAI------RDFLGSSDPYVVLELGN-----QKLKTRVVYKNLNPEWNEELTFTVKDP-NTPLKVTVY 73 (168)
T ss_pred eEEEEEEEeecCeee------eccccCCCCeEEEEECC-----eeeeeeeecCCCCCcccceEEEEecCC-CceEEEEEE
Confidence 469999999999853 34447789999999875 688999999999999999999999887 456999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQG 565 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~G 565 (591)
|+|..+++||+|.|+|||..+..+
T Consensus 74 D~D~fs~dD~mG~A~I~l~p~~~~ 97 (168)
T KOG1030|consen 74 DKDTFSSDDFMGEATIPLKPLLEA 97 (168)
T ss_pred eCCCCCcccccceeeeccHHHHHH
Confidence 999999999999999999988654
No 78
>cd08685 C2_RGS-like C2 domain of the Regulator Of G-Protein Signaling (RGS) family. This CD contains members of the regulator of G-protein signaling (RGS) family. RGS is a GTPase activating protein which inhibits G-protein mediated signal transduction. The protein is largely cytosolic, but G-protein activation leads to translocation of this protein to the plasma membrane. A nuclear form of this protein has also been described, but its sequence has not been identified. There are multiple alternatively spliced transcript variants in this family with some members having additional domains (ex. PDZ and RGS) downstream of the C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind pho
Probab=99.52 E-value=5.1e-14 Score=127.15 Aligned_cols=98 Identities=16% Similarity=0.208 Sum_probs=80.4
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc-cEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 540 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel-a~Lrf~V 540 (591)
..|.|+|+.|++|+. .+ .+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|.|.|
T Consensus 12 ~~L~V~Vi~ar~L~~------~~-~g~~dpYVkv~l~p~~~~~~~~kT~v~~~t~~P~~nE~F~f~v~~~~~~~~l~v~V 84 (119)
T cd08685 12 RKLTLHVLEAKGLRS------TN-SGTCNSYVKISLSPDKEVRFRQKTSTVPDSANPLFHETFSFDVNERDYQKRLLVTV 84 (119)
T ss_pred CEEEEEEEEEECCCC------CC-CCCCCeeEEEEEEeCCCCcceEeCccccCCCCCccccEEEEEcChHHhCCEEEEEE
Confidence 469999999999963 13 467899999999876555567899999999999999999999865443 4688999
Q ss_pred EeccCCC-CCCccEEEEEECCccCCcc
Q 007734 541 HEYDMSE-KDDFGGQTCLPVSELKQGI 566 (591)
Q Consensus 541 ~D~d~~~-~dd~lGq~~ipL~sL~~Gy 566 (591)
||.+... ++++||.+.||+.++..|-
T Consensus 85 ~~~~~~~~~~~~lG~~~i~l~~~~~~~ 111 (119)
T cd08685 85 WNKLSKSRDSGLLGCMSFGVKSIVNQK 111 (119)
T ss_pred ECCCCCcCCCEEEEEEEecHHHhccCc
Confidence 9988654 4689999999999986553
No 79
>cd08382 C2_Smurf-like C2 domain present in Smad ubiquitination-related factor (Smurf)-like proteins. A single C2 domain is found in Smurf proteins, C2-WW-HECT-domain E3s, which play an important role in the downregulation of the TGF-beta signaling pathway. Smurf proteins also regulate cell shape, motility, and polarity by degrading small guanosine triphosphatases (GTPases). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are
Probab=99.52 E-value=1.2e-13 Score=125.26 Aligned_cols=113 Identities=20% Similarity=0.359 Sum_probs=90.6
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|+|+|++|++|+. .+.++.+||||+|.+.| ...+||++++++.||+|||+|.|.+.. ...|.|.|||+
T Consensus 2 l~v~v~~A~~L~~------~~~~~~~dpyv~v~~~~----~~~~kT~v~~~t~nP~Wne~f~~~~~~--~~~l~i~V~d~ 69 (123)
T cd08382 2 VRLTVLCADGLAK------RDLFRLPDPFAVITVDG----GQTHSTDVAKKTLDPKWNEHFDLTVGP--SSIITIQVFDQ 69 (123)
T ss_pred eEEEEEEecCCCc------cCCCCCCCcEEEEEECC----ccceEccEEcCCCCCcccceEEEEeCC--CCEEEEEEEEC
Confidence 8999999999953 24467899999999864 356799999999999999999999854 56899999999
Q ss_pred cCCCC--CCccEEEEEECCccCC----cceEEEccCCCCC--cccCeEEEEEE
Q 007734 544 DMSEK--DDFGGQTCLPVSELKQ----GIRAVPLHDRKGE--RYKSVKLLMHF 588 (591)
Q Consensus 544 d~~~~--dd~lGq~~ipL~sL~~----GyR~vpL~d~~g~--~~~~asLlv~i 588 (591)
+..++ +++||++.++++.|.. +..|+||.+.... ....++|.+++
T Consensus 70 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~l~~~~~~~~~~~~G~v~~~~ 122 (123)
T cd08382 70 KKFKKKDQGFLGCVRIRANAVLPLKDTGYQRLDLRKLKKSDNLSVRGKIVVSL 122 (123)
T ss_pred CCCCCCCCceEeEEEEEHHHccccCCCccceeEeecCCCCCCceEeeEEEEEe
Confidence 87654 4799999999999742 3679999776653 23356788775
No 80
>cd08387 C2A_Synaptotagmin-8 C2A domain first repeat present in Synaptotagmin 8. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involv
Probab=99.52 E-value=1e-13 Score=125.56 Aligned_cols=104 Identities=21% Similarity=0.301 Sum_probs=84.2
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
.+.|.|+|++|++|+. .+..+.+||||+|.+. |....++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 15 ~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~l~--~~~~~~~kT~v~~~t~~P~wne~f~f~v~~~~l~~~~l~i 86 (124)
T cd08387 15 MGILNVKLIQARNLQP------RDFSGTADPYCKVRLL--PDRSNTKQSKIHKKTLNPEFDESFVFEVPPQELPKRTLEV 86 (124)
T ss_pred CCEEEEEEEEeeCCCC------CCCCCCCCCeEEEEEe--cCCCCcEeCceEcCCCCCCcccEEEEeCCHHHhCCCEEEE
Confidence 3569999999999963 2345678999999984 333456899999999999999999999875543 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc---eEEEcc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLH 572 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~ 572 (591)
.|||++..+++++||++.++|+.+..|- .|.+|.
T Consensus 87 ~V~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~l~ 123 (124)
T cd08387 87 LLYDFDQFSRDECIGVVELPLAEVDLSEKLDLWRKIQ 123 (124)
T ss_pred EEEECCCCCCCceeEEEEEecccccCCCCcceEEECc
Confidence 9999998888999999999999997553 455654
No 81
>cd04030 C2C_KIAA1228 C2 domain third repeat present in uncharacterized human KIAA1228-like proteins. KIAA proteins are uncharacterized human proteins. They were compiled by the Kazusa mammalian cDNA project which identified more than 2000 human genes. They are identified by 4 digit codes that precede the KIAA designation. Many KIAA genes are still functionally uncharacterized including KIAA1228. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1
Probab=99.51 E-value=1.1e-13 Score=125.69 Aligned_cols=105 Identities=28% Similarity=0.352 Sum_probs=84.6
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|+|+|++|++|+. .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 15 ~~~L~V~vi~a~~L~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~~~nP~wne~f~f~i~~~~l~~~~l~i 88 (127)
T cd04030 15 RQKLIVTVHKCRNLPP------CDSSDIPDPYVRLYLLPDKSKSTRRKTSVKKDNLNPVFDETFEFPVSLEELKRRTLDV 88 (127)
T ss_pred CCEEEEEEEEEECCCC------ccCCCCCCceEEEEEEcCCCCCceEecccccCCCCCEECeEEEEecCHHHhcCCEEEE
Confidence 3569999999999964 234567899999999765444567899999999999999999999865443 57999
Q ss_pred EEEeccCC--CCCCccEEEEEECCccCCcc---eEEEc
Q 007734 539 EVHEYDMS--EKDDFGGQTCLPVSELKQGI---RAVPL 571 (591)
Q Consensus 539 ~V~D~d~~--~~dd~lGq~~ipL~sL~~Gy---R~vpL 571 (591)
.|||.+.. +++++||++.++|..|..+. +|.+|
T Consensus 89 ~v~~~~~~~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L 126 (127)
T cd04030 89 AVKNSKSFLSREKKLLGQVLIDLSDLDLSKGFTQWYDL 126 (127)
T ss_pred EEEECCcccCCCCceEEEEEEecccccccCCccceEEC
Confidence 99998864 57899999999999986543 45555
No 82
>cd08402 C2B_Synaptotagmin-1 C2 domain second repeat present in Synaptotagmin 1. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of the class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis. It, like synaptotagmin-2, has an N-glycosylated N-terminus. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are:
Probab=99.51 E-value=2.9e-14 Score=131.41 Aligned_cols=113 Identities=19% Similarity=0.229 Sum_probs=90.6
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
.+.|+|+|++|++|+. .+..+.+||||+|.+.+......+++|++++++.||+|||+|.|.+...++ ..|+|
T Consensus 14 ~~~l~V~Vi~a~~L~~------~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l~~ 87 (136)
T cd08402 14 AGKLTVVILEAKNLKK------MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKRTLNPYYNESFSFEVPFEQIQKVHLIV 87 (136)
T ss_pred CCeEEEEEEEeeCCCc------ccCCCCCCCeEEEEEEECCcccceeeccceeCCCCCcccceEEEECCHHHhCCCEEEE
Confidence 3569999999999963 234567899999999754444456789999999999999999999875554 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcce-EEEccCCCCCcc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGERY 579 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~GyR-~vpL~d~~g~~~ 579 (591)
.|||++..+++++||++.+++.+...++. |.+|+...++++
T Consensus 88 ~v~d~~~~~~~~~iG~~~i~~~~~~~~~~~W~~~~~~~~~~~ 129 (136)
T cd08402 88 TVLDYDRIGKNDPIGKVVLGCNATGAELRHWSDMLASPRRPI 129 (136)
T ss_pred EEEeCCCCCCCceeEEEEECCccCChHHHHHHHHHhCCCCee
Confidence 99999988889999999999998876664 567776666654
No 83
>cd04024 C2A_Synaptotagmin-like C2 domain first repeat present in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permu
Probab=99.51 E-value=2e-13 Score=123.83 Aligned_cols=117 Identities=22% Similarity=0.315 Sum_probs=94.4
Q ss_pred eEEEEEEeccccCcCCCCCccCC--CCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDA--YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~--~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V 540 (591)
.|+|+|++|++|+. .+. .+.+||||.|.+.+ .+.+|++++++.||+|||+|.|.+..+....|.|.|
T Consensus 2 ~l~v~v~~a~~L~~------~~~~~~~~~dPyv~v~~~~-----~~~kT~~~~~t~~P~Wne~f~~~~~~~~~~~l~i~v 70 (128)
T cd04024 2 VLRVHVVEAKDLAA------KDRSGKGKSDPYAILSVGA-----QRFKTQTIPNTLNPKWNYWCEFPIFSAQNQLLKLIL 70 (128)
T ss_pred EEEEEEEEeeCCCc------ccCCCCCCcCCeEEEEECC-----EEEecceecCCcCCccCCcEEEEecCCCCCEEEEEE
Confidence 58999999999964 133 56789999998743 568999999999999999999999875567899999
Q ss_pred EeccCCCCCCccEEEEEECCccC----Cc--ceEEEccCCCCC--cccCeEEEEEEEE
Q 007734 541 HEYDMSEKDDFGGQTCLPVSELK----QG--IRAVPLHDRKGE--RYKSVKLLMHFEF 590 (591)
Q Consensus 541 ~D~d~~~~dd~lGq~~ipL~sL~----~G--yR~vpL~d~~g~--~~~~asLlv~i~f 590 (591)
||++..+++++||++.++|..+. .| -.|++|.+.... ....++|.+++.|
T Consensus 71 ~d~~~~~~~~~lG~~~i~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~~~G~i~l~~~~ 128 (128)
T cd04024 71 WDKDRFAGKDYLGEFDIALEEVFADGKTGQSDKWITLKSTRPGKTSVVSGEIHLQFSW 128 (128)
T ss_pred EECCCCCCCCcceEEEEEHHHhhcccccCccceeEEccCcccCccccccceEEEEEEC
Confidence 99998778999999999999985 23 368899876332 2345788888865
No 84
>cd04018 C2C_Ferlin C2 domain third repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.51 E-value=9e-14 Score=130.61 Aligned_cols=107 Identities=24% Similarity=0.363 Sum_probs=83.2
Q ss_pred eEEEEEEeccccCcCCCCC--------ccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc-
Q 007734 463 TLKVTVYMGEGWYYDFPHT--------HFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL- 533 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~--------~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel- 533 (591)
.|.|+|+.|++|+...... -.+..+.+||||+|.+.+ .+.||++++++.||+|||+|.|.+..++.
T Consensus 1 ~~~V~V~~A~dLp~~d~~~~~~~~~~~~~~~~~~~DPYV~V~~~g-----~~~kT~v~~~t~nPvWNE~f~f~v~~p~~~ 75 (151)
T cd04018 1 RFIFKIYRAEDLPQMDSGIMANVKKAFLGEKKELVDPYVEVSFAG-----QKVKTSVKKNSYNPEWNEQIVFPEMFPPLC 75 (151)
T ss_pred CeEEEEEEeCCCCccChhhhccceeccccCCCCCcCcEEEEEECC-----EeeecceEcCCCCCCcceEEEEEeeCCCcC
Confidence 3789999999997411000 001234689999999876 45689999999999999999999877665
Q ss_pred cEEEEEEEeccCCCCCCccEEEEEECCccCC-c---------ceEEEccCC
Q 007734 534 ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ-G---------IRAVPLHDR 574 (591)
Q Consensus 534 a~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~-G---------yR~vpL~d~ 574 (591)
..|.|+|||+|..+++++||++.++|..|.. | -+|+.|++.
T Consensus 76 ~~l~~~v~D~d~~~~dd~iG~~~l~l~~l~~~~~~~~lp~~~p~W~~lyg~ 126 (151)
T cd04018 76 ERIKIQIRDWDRVGNDDVIGTHFIDLSKISNSGDEGFLPTFGPSFVNLYGS 126 (151)
T ss_pred CEEEEEEEECCCCCCCCEEEEEEEeHHHhccCCccccCCccCceEEEeecC
Confidence 4899999999988889999999999998742 2 267777653
No 85
>cd08521 C2A_SLP C2 domain first repeat present in Synaptotagmin-like proteins. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into
Probab=99.51 E-value=1.4e-13 Score=124.08 Aligned_cols=105 Identities=20% Similarity=0.292 Sum_probs=84.0
Q ss_pred ceeEEEEEEeccccCcCCCCCccC-CCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d-~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lr 537 (591)
...|.|+|++|++|+.. + ..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.
T Consensus 13 ~~~L~V~v~~a~~L~~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~~P~wne~f~f~i~~~~l~~~~l~ 86 (123)
T cd08521 13 TGSLEVHIKECRNLAYA------DEKKKRSNPYVKVYLLPDKSKQSKRKTSVKKNTTNPVFNETLKYHISKSQLETRTLQ 86 (123)
T ss_pred CCEEEEEEEEecCCCCc------CCCCCCCCcEEEEEEecCCCcCceeeccccCCCCCCcccceEEEeCCHHHhCCCEEE
Confidence 35699999999999641 2 3457899999998754333356899999999999999999999875443 5799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCc---ceEEEc
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPL 571 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~G---yR~vpL 571 (591)
|.|||++..+++++||++.++|+.+..| -.|.||
T Consensus 87 i~v~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~w~~l 123 (123)
T cd08521 87 LSVWHHDRFGRNTFLGEVEIPLDSWDLDSQQSEWYPL 123 (123)
T ss_pred EEEEeCCCCcCCceeeEEEEecccccccCCCccEEEC
Confidence 9999999888899999999999999654 346665
No 86
>cd08384 C2B_Rabphilin_Doc2 C2 domain second repeat present in Rabphilin and Double C2 domain. Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domai
Probab=99.51 E-value=4.2e-14 Score=129.66 Aligned_cols=113 Identities=18% Similarity=0.251 Sum_probs=89.1
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
.+.|.|+|++|++|+. .+..+.+||||+|.+.+......+.||++++++.||+|||+|.|.+..+++ ..|.|
T Consensus 12 ~~~L~V~Vi~a~~L~~------~d~~~~~DpyV~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~l~~~~l~~ 85 (133)
T cd08384 12 RRGLIVGIIRCVNLAA------MDANGYSDPFVKLYLKPDAGKKSKHKTQVKKKTLNPEFNEEFFYDIKHSDLAKKTLEI 85 (133)
T ss_pred CCEEEEEEEEEcCCCC------cCCCCCCCcEEEEEEEcCCCccCCceeeeEeccCCCCcccEEEEECCHHHhCCCEEEE
Confidence 4569999999999964 234567899999999764444456799999999999999999999876554 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc-eEEEccCCCCCcc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERY 579 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~Gy-R~vpL~d~~g~~~ 579 (591)
.|||+|..+++++||++.+++.+..... .|..++...++++
T Consensus 86 ~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~W~~~l~~~~~~~ 127 (133)
T cd08384 86 TVWDKDIGKSNDYIGGLQLGINAKGERLRHWLDCLKNPDKKI 127 (133)
T ss_pred EEEeCCCCCCccEEEEEEEecCCCCchHHHHHHHHhCCCCCh
Confidence 9999998888999999999998753332 3556666555554
No 87
>cd08388 C2A_Synaptotagmin-4-11 C2A domain first repeat present in Synaptotagmins 4 and 11. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmins 4 and 11, class 4 synaptotagmins, are located in the brain. Their functions are unknown. They are distinguished from the other synaptotagmins by having and Asp to Ser substitution in their C2A domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence
Probab=99.50 E-value=1.3e-13 Score=125.96 Aligned_cols=96 Identities=23% Similarity=0.319 Sum_probs=77.1
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCC-CCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEE-eeecCCc--cEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF-PLSVPEL--ALL 536 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~-~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F-~v~~pel--a~L 536 (591)
..+|+|+|++|++|+.. +.. +.+||||+|.+.+ .+..++||++++++.||+|||+|.| .+...++ ..|
T Consensus 15 ~~~L~V~Vi~a~~L~~~------~~~~~~~DpyV~v~l~~--~~~~~~kT~v~~~t~nP~wnE~F~f~~~~~~~~~~~~L 86 (128)
T cd08388 15 KKALLVNIIECRDLPAM------DEQSGTSDPYVKLQLLP--EKEHKVKTRVLRKTRNPVYDETFTFYGIPYNQLQDLSL 86 (128)
T ss_pred CCEEEEEEEEeECCCCC------CCCCCCcCCEEEEEEeC--CcCceeeccEEcCCCCCceeeEEEEcccCHHHhCCCEE
Confidence 35699999999999641 222 6689999999863 3445679999999999999999999 3442222 469
Q ss_pred EEEEEeccCCCCCCccEEEEEECCccCC
Q 007734 537 RIEVHEYDMSEKDDFGGQTCLPVSELKQ 564 (591)
Q Consensus 537 rf~V~D~d~~~~dd~lGq~~ipL~sL~~ 564 (591)
+|.|||+|..+++++||++.+||+.+..
T Consensus 87 ~~~V~d~d~~~~d~~lG~~~i~L~~l~~ 114 (128)
T cd08388 87 HFAVLSFDRYSRDDVIGEVVCPLAGADL 114 (128)
T ss_pred EEEEEEcCCCCCCceeEEEEEeccccCC
Confidence 9999999988889999999999999843
No 88
>cd04032 C2_Perforin C2 domain of Perforin. Perforin contains a single copy of a C2 domain in its C-terminus and plays a role in lymphocyte-mediated cytotoxicity. Mutations in perforin leads to familial hemophagocytic lymphohistiocytosis type 2. The function of perforin is calcium dependent and the C2 domain is thought to confer this binding to target cell membranes. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few
Probab=99.50 E-value=1.6e-13 Score=125.27 Aligned_cols=93 Identities=29% Similarity=0.375 Sum_probs=78.5
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEee-ecCCccEEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPELALLRIE 539 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v-~~pela~Lrf~ 539 (591)
..+|+|+|++|++|+. +..+.+||||+|.+.+ .++||++++++.||+|||+|.|.. ..+....|+|+
T Consensus 27 ~~~L~V~V~~A~~L~~-------d~~g~~DPYVkV~~~~-----~~~kT~vi~~t~nPvWNE~F~f~~~~~~~~~~L~v~ 94 (127)
T cd04032 27 LATLTVTVLRATGLWG-------DYFTSTDGYVKVFFGG-----QEKRTEVIWNNNNPRWNATFDFGSVELSPGGKLRFE 94 (127)
T ss_pred cEEEEEEEEECCCCCc-------CcCCCCCeEEEEEECC-----ccccCceecCCCCCcCCCEEEEecccCCCCCEEEEE
Confidence 4689999999999953 2346789999999865 378999999999999999999974 34456789999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCc
Q 007734 540 VHEYDMSEKDDFGGQTCLPVSELKQG 565 (591)
Q Consensus 540 V~D~d~~~~dd~lGq~~ipL~sL~~G 565 (591)
|||+|..+++++||++.++|.....+
T Consensus 95 V~D~d~~s~dd~IG~~~i~l~~~~~~ 120 (127)
T cd04032 95 VWDRDNGWDDDLLGTCSVVPEAGVHE 120 (127)
T ss_pred EEeCCCCCCCCeeEEEEEEecCCcee
Confidence 99999888899999999999876544
No 89
>cd08391 C2A_C2C_Synaptotagmin_like C2 domain first and third repeat in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular
Probab=99.50 E-value=3.4e-13 Score=121.01 Aligned_cols=117 Identities=25% Similarity=0.321 Sum_probs=90.3
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEe
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 542 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 542 (591)
.|+|+|++|++|+...........+.+||||+|.+.+ ..++|++++++.||+|||+|.|.+..+....|.|.|||
T Consensus 2 ~l~v~v~~a~~L~~~d~~~~~~~~g~~dPyv~v~~~~-----~~~kT~~~~~t~~P~W~e~f~~~v~~~~~~~l~i~v~d 76 (121)
T cd08391 2 VLRIHVIEAQDLVAKDKFVGGLVKGKSDPYVIVRVGA-----QTFKSKVIKENLNPKWNEVYEAVVDEVPGQELEIELFD 76 (121)
T ss_pred eEEEEEEEccCCcccccccccCCCCCcCCEEEEEECC-----EeEEccccCCCCCCcccceEEEEeCCCCCCEEEEEEEe
Confidence 5899999999996410000001135689999999864 57899999999999999999999876556789999999
Q ss_pred ccCCCCCCccEEEEEECCccCCc---ceEEEccCCCCCcccCeEEEEEEEE
Q 007734 543 YDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 543 ~d~~~~dd~lGq~~ipL~sL~~G---yR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
++.. ++++||++.++|+.+..+ -.|++|.+. ..+.|.++++|
T Consensus 77 ~~~~-~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~-----~~G~~~~~~~~ 121 (121)
T cd08391 77 EDPD-KDDFLGRLSIDLGSVEKKGFIDEWLPLEDV-----KSGRLHLKLEW 121 (121)
T ss_pred cCCC-CCCcEEEEEEEHHHhcccCccceEEECcCC-----CCceEEEEEeC
Confidence 9877 799999999999998654 268899764 34567777765
No 90
>cd08410 C2B_Synaptotagmin-17 C2 domain second repeat present in Synaptotagmin 17. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-
Probab=99.50 E-value=4.6e-14 Score=130.16 Aligned_cols=112 Identities=17% Similarity=0.172 Sum_probs=87.1
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE 539 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf~ 539 (591)
+.|+|+|++|++|+. .+..+.+||||+|.+.+......+++|++++++.||+|||+|.|.+...++ ..|+|.
T Consensus 14 ~~L~V~vi~a~~L~~------~d~~g~~DPyV~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~F~f~i~~~~l~~~~l~~~ 87 (135)
T cd08410 14 GRLNVDIIRAKQLLQ------TDMSQGSDPFVKIQLVHGLKLIKTKKTSCMRGTIDPFYNESFSFKVPQEELENVSLVFT 87 (135)
T ss_pred CeEEEEEEEecCCCc------ccCCCCCCeEEEEEEEcCCcccceEcCccccCCCCCccceeEEEeCCHHHhCCCEEEEE
Confidence 569999999999964 244567999999998542222345789999999999999999999865555 369999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCc--ceEEEccCCCCCcc
Q 007734 540 VHEYDMSEKDDFGGQTCLPVSELKQG--IRAVPLHDRKGERY 579 (591)
Q Consensus 540 V~D~d~~~~dd~lGq~~ipL~sL~~G--yR~vpL~d~~g~~~ 579 (591)
|||+|..+++++||++.|...+.... -.|-.|++..++++
T Consensus 88 V~d~d~~~~~~~iG~~~l~~~~~~~~~~~~W~~l~~~~~~~~ 129 (135)
T cd08410 88 VYGHNVKSSNDFIGRIVIGQYSSGPSETNHWRRMLNSQRTAV 129 (135)
T ss_pred EEeCCCCCCCcEEEEEEEcCccCCchHHHHHHHHHhCCCCEe
Confidence 99999888899999998776555442 34567777777664
No 91
>cd04011 C2B_Ferlin C2 domain second repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme
Probab=99.50 E-value=1.5e-13 Score=122.16 Aligned_cols=99 Identities=20% Similarity=0.175 Sum_probs=82.7
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCC----ccEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE----LALL 536 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pe----la~L 536 (591)
...|+|+|+.|++|+ .+.+||||+|.+.+ .++||++++++.||+|||+|.|.+..+. .+.|
T Consensus 3 ~~~l~V~v~~a~~L~----------~~~~dpyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~~~~l 67 (111)
T cd04011 3 DFQVRVRVIEARQLV----------GGNIDPVVKVEVGG-----QKKYTSVKKGTNCPFYNEYFFFNFHESPDELFDKII 67 (111)
T ss_pred cEEEEEEEEEcccCC----------CCCCCCEEEEEECC-----EeeeeeEEeccCCCccccEEEEecCCCHHHHhcCeE
Confidence 356999999999984 24689999999975 4678999999999999999999986543 2579
Q ss_pred EEEEEeccCCCCCCccEEEEEECCccCCc------ceEEEccCC
Q 007734 537 RIEVHEYDMSEKDDFGGQTCLPVSELKQG------IRAVPLHDR 574 (591)
Q Consensus 537 rf~V~D~d~~~~dd~lGq~~ipL~sL~~G------yR~vpL~d~ 574 (591)
.|.|||.+..+++++||++.++|+.+..+ -+|+||.|+
T Consensus 68 ~i~V~d~~~~~~~~~iG~~~i~l~~v~~~~~~~~~~~w~~L~~~ 111 (111)
T cd04011 68 KISVYDSRSLRSDTLIGSFKLDVGTVYDQPDHAFLRKWLLLTDP 111 (111)
T ss_pred EEEEEcCcccccCCccEEEEECCccccCCCCCcceEEEEEeeCc
Confidence 99999999877799999999999999655 257888764
No 92
>cd04043 C2_Munc13_fungal C2 domain in Munc13 (mammalian uncoordinated) proteins; fungal group. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synap
Probab=99.50 E-value=3.9e-13 Score=121.91 Aligned_cols=113 Identities=20% Similarity=0.308 Sum_probs=87.7
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEe
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 542 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 542 (591)
.|+|+|++|++|+. .+..+.+||||+|.+.+. .....||+++.++.||.|||+|.|.+..+....|.|.|||
T Consensus 2 ~~~V~v~~a~~L~~------~~~~~~~Dpyv~v~~~~~--~~~~~kT~~~~~t~~P~Wne~f~f~i~~~~~~~L~i~v~d 73 (126)
T cd04043 2 LFTIRIVRAENLKA------DSSNGLSDPYVTLVDTNG--KRRIAKTRTIYDTLNPRWDEEFELEVPAGEPLWISATVWD 73 (126)
T ss_pred EEEEEEEEeECCCC------CCCCCCCCceEEEEECCC--CeeeecccEecCCCCCcccceEEEEcCCCCCCEEEEEEEE
Confidence 58999999999964 234567899999986532 1345799999999999999999999877656789999999
Q ss_pred ccCCCCCCccEEEEEECCccCC---cc---eEEEccCCCCCcccCeEEEEEEEE
Q 007734 543 YDMSEKDDFGGQTCLPVSELKQ---GI---RAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 543 ~d~~~~dd~lGq~~ipL~sL~~---Gy---R~vpL~d~~g~~~~~asLlv~i~f 590 (591)
++..+++++||++.++|+.+.. |. +|++|.. . +.+.+++.+
T Consensus 74 ~d~~~~~~~iG~~~i~l~~~~~~~~~~~~~~w~~l~~-~------g~i~l~~~~ 120 (126)
T cd04043 74 RSFVGKHDLCGRASLKLDPKRFGDDGLPREIWLDLDT-Q------GRLLLRVSM 120 (126)
T ss_pred CCCCCCCceEEEEEEecCHHHcCCCCCCceEEEEcCC-C------CeEEEEEEE
Confidence 9988789999999999987542 32 5788853 3 355555544
No 93
>cd08401 C2A_RasA2_RasA3 C2 domain first repeat present in RasA2 and RasA3. RasA2 and RasA3 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA2 and RasA3 are both inositol 1,3,4,5-tetrakisphosphate-binding proteins and contain an N-terminal C2 domain, a Ras-GAP domain, a pleckstrin-homology (PH) domain which localizes it to the plasma membrane, and Bruton's Tyrosine Kinase (BTK) a zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular p
Probab=99.49 E-value=4.3e-13 Score=121.45 Aligned_cols=117 Identities=18% Similarity=0.257 Sum_probs=89.0
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|+|+|+.|.+|+.. . ...+.+||||.|.+.+ ....||++++++.||+|||+|.|.+... ...|.|.|||+
T Consensus 2 l~v~v~~a~~L~~~----~-~~~g~sDpYv~v~l~~----~~~~kT~v~~kt~~P~WnE~F~f~v~~~-~~~l~~~v~d~ 71 (121)
T cd08401 2 LKIKIGEAKNLPPR----S-GPNKMRDCYCTVNLDQ----EEVFRTKTVEKSLCPFFGEDFYFEIPRT-FRHLSFYIYDR 71 (121)
T ss_pred eEEEEEEccCCCCC----C-CCCCCcCcEEEEEECC----ccEEEeeEEECCCCCccCCeEEEEcCCC-CCEEEEEEEEC
Confidence 78999999999641 1 1235689999998843 2457899999999999999999998643 36899999999
Q ss_pred cCCCCCCccEEEEEECCccCCc---ceEEEccCCCCCcccCeEEEEEEEE
Q 007734 544 DMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~~G---yR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
+..+++++||.+.++++.+..| -.|++|.-.....-..+.|.+.+.|
T Consensus 72 ~~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~ 121 (121)
T cd08401 72 DVLRRDSVIGKVAIKKEDLHKYYGKDTWFPLQPVDADSEVQGKVHLELRL 121 (121)
T ss_pred CCCCCCceEEEEEEEHHHccCCCCcEeeEEEEccCCCCcccEEEEEEEEC
Confidence 9888899999999999999754 3578886432211135677766653
No 94
>cd04027 C2B_Munc13 C2 domain second repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrev
Probab=99.48 E-value=4.6e-13 Score=122.10 Aligned_cols=114 Identities=29% Similarity=0.407 Sum_probs=91.5
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEe
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 542 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 542 (591)
.|+|+|++|++|+. .+..+.+||||+|.+.+ .+.+|+++.++.||.|||+|.|.+..+ ...|.|.|||
T Consensus 2 ~L~V~vi~a~~L~~------~d~~g~~DPyv~v~~~~-----~~~kT~~v~~t~~P~Wne~f~f~~~~~-~~~l~i~v~d 69 (127)
T cd04027 2 KISITVVCAQGLIA------KDKTGTSDPYVTVQVGK-----TKKRTKTIPQNLNPVWNEKFHFECHNS-SDRIKVRVWD 69 (127)
T ss_pred eEEEEEEECcCCcC------CCCCCCcCcEEEEEECC-----EeeecceecCCCCCccceEEEEEecCC-CCEEEEEEEE
Confidence 58999999999964 23456789999999843 467999999999999999999988654 3579999999
Q ss_pred ccCC-----------CCCCccEEEEEECCccCCcc-eEEEccCCCCCcccCeEEEEEE
Q 007734 543 YDMS-----------EKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHF 588 (591)
Q Consensus 543 ~d~~-----------~~dd~lGq~~ipL~sL~~Gy-R~vpL~d~~g~~~~~asLlv~i 588 (591)
+|.. +.+++||++.+++..+..+- .|.+|....+.....+.|.+++
T Consensus 70 ~d~~~~~~~~~~~~~~~~~~iG~~~i~l~~~~~~~~~w~~L~~~~~~~~~~G~i~~~~ 127 (127)
T cd04027 70 EDDDIKSRLKQKFTRESDDFLGQTIIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHI 127 (127)
T ss_pred CCCCcccccceeccccCCCcceEEEEEhHHccCCCCeEEECccCCCCCcEeEEEEEEC
Confidence 8842 46899999999999886554 6889987666655677888774
No 95
>cd04017 C2D_Ferlin C2 domain fourth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme
Probab=99.48 E-value=4.6e-13 Score=123.40 Aligned_cols=115 Identities=23% Similarity=0.425 Sum_probs=89.7
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeec-C--------Cc
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-P--------EL 533 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~-p--------el 533 (591)
.|+|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+.. + +.
T Consensus 2 ~l~v~V~~a~~L~~------~d~~g~~dpyv~v~~~~-----~~~kT~v~~~t~nP~Wne~~~f~~~~~~~~~~~~~~~~ 70 (135)
T cd04017 2 QLRAYIYQARDLLA------ADKSGLSDPFARVSFLN-----QSQETEVIKETLSPTWDQTLIFDEVELYGSPEEIAQNP 70 (135)
T ss_pred EEEEEEEEeecCcC------CCCCCCCCCEEEEEECC-----eeeEeeeEcCCCCCccCcEEEEeeeeccCChHHhhcCC
Confidence 58999999999964 24457799999999864 57799999999999999999997532 1 12
Q ss_pred cEEEEEEEeccCCCCCCccEEEEE-ECCccCC------cceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 534 ALLRIEVHEYDMSEKDDFGGQTCL-PVSELKQ------GIRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 534 a~Lrf~V~D~d~~~~dd~lGq~~i-pL~sL~~------GyR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
..|.|.|||+|..+++++||++.+ |+..++. --+|++|.. .|. ..+.|+|.|+++
T Consensus 71 ~~l~v~V~d~d~~~~d~~iG~~~i~~~~~~~~~~~~~~~~~W~~L~~-~~~--~~Geil~~~~~~ 132 (135)
T cd04017 71 PLVVVELFDQDSVGKDEFLGRSVAKPLVKLDLEEDFPPKLQWFPIYK-GGQ--SAGELLAAFELI 132 (135)
T ss_pred CEEEEEEEeCcCCCCCccceEEEeeeeeecccCCCCCCCceEEEeec-CCC--chhheeEEeEEE
Confidence 579999999998888999999986 6666642 237899973 343 356899998875
No 96
>cd04051 C2_SRC2_like C2 domain present in Soybean genes Regulated by Cold 2 (SRC2)-like proteins. SRC2 production is a response to pathogen infiltration. The initial response of increased Ca2+ concentrations are coupled to downstream signal transduction pathways via calcium binding proteins. SRC2 contains a single C2 domain which localizes to the plasma membrane and is involved in Ca2+ dependent protein binding. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such
Probab=99.48 E-value=1.8e-13 Score=124.04 Aligned_cols=108 Identities=27% Similarity=0.329 Sum_probs=88.9
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCC-CCCCccCcEEEEeeecCC----ccEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPE----LALLR 537 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~n-n~NPvWNEtf~F~v~~pe----la~Lr 537 (591)
+|+|+|++|++|+. .+..+.+||||+|.+.+ ..+++|+++.+ +.||+|||+|.|.+..++ ...|.
T Consensus 1 ~L~V~V~sA~~L~~------~~~~~~~dpYv~v~~~~----~~~~~T~~~~~~~~~P~Wne~f~f~v~~~~~~~~~~~l~ 70 (125)
T cd04051 1 TLEITIISAEDLKN------VNLFGKMKVYAVVWIDP----SHKQSTPVDRDGGTNPTWNETLRFPLDERLLQQGRLALT 70 (125)
T ss_pred CEEEEEEEcccCCC------CCcccCCceEEEEEECC----CcccccccccCCCCCCCCCCEEEEEcChHhcccCccEEE
Confidence 48999999999964 23356789999999875 34678998764 699999999999997764 47899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc--------eEEEccCCCCCccc
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQGI--------RAVPLHDRKGERYK 580 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~Gy--------R~vpL~d~~g~~~~ 580 (591)
|.|||++..+++++||++.+||..+..+. .+.+|.+++|++.+
T Consensus 71 ~~v~d~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~~~~~l~~~~g~~~G 121 (125)
T cd04051 71 IEVYCERPSLGDKLIGEVRVPLKDLLDGASPAGELRFLSYQLRRPSGKPQG 121 (125)
T ss_pred EEEEECCCCCCCCcEEEEEEEHHHhhcccCCCCcceeEEEEeECCCCCcCe
Confidence 99999987677999999999999987554 45799988888754
No 97
>cd08403 C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 3, a member of class 3 synaptotagmins, is located in the brain and localized to the active zone and plasma membrane. It functions as a Ca2+ sensor for fast exocytosis. It, along with synaptotagmins 5,6, and 10, has disulfide bonds at its N-terminus. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and localized to the synaptic vesicles. It is thought to be a Ca2+-sensor for dense-core vesicle exocytosis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind
Probab=99.48 E-value=8.2e-14 Score=128.04 Aligned_cols=113 Identities=19% Similarity=0.192 Sum_probs=89.7
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
.+.|+|+|++|++|+. .+..+.+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 13 ~~~L~V~v~~A~~L~~------~d~~g~~dpyvkv~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~~~~~~l~~ 86 (134)
T cd08403 13 AGRLTLTIIKARNLKA------MDITGFSDPYVKVSLMCEGRRLKKKKTSVKKNTLNPTYNEALVFDVPPENVDNVSLII 86 (134)
T ss_pred CCEEEEEEEEeeCCCc------cccCCCCCceEEEEEEeCCcccceecCCcccCCCCCcccceEEEECCHHHhCCCEEEE
Confidence 3569999999999964 244577899999998653333456789999999999999999999764433 46999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcce-EEEccCCCCCcc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGERY 579 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~GyR-~vpL~d~~g~~~ 579 (591)
.|||++..+++++||.+.+|+.....|+. |..|....|+++
T Consensus 87 ~v~d~~~~~~~~~IG~~~l~~~~~~~~~~~w~~~~~~~~~~~ 128 (134)
T cd08403 87 AVVDYDRVGHNELIGVCRVGPNADGQGREHWNEMLANPRKPI 128 (134)
T ss_pred EEEECCCCCCCceeEEEEECCCCCCchHHHHHHHHHCCCCee
Confidence 99999988889999999999987777775 456666666654
No 98
>cd04054 C2A_Rasal1_RasA4 C2 domain first repeat present in RasA1 and RasA4. Rasal1 and RasA4 are both members of GAP1 (GTPase activating protein 1). Rasal1 responds to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. RasA4 suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both of these proteins contains two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins.
Probab=99.48 E-value=4.7e-13 Score=120.98 Aligned_cols=115 Identities=18% Similarity=0.224 Sum_probs=88.8
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|.|+|+.|++|+. .+..+.+||||+|.+.+ ....||+++.++.||+|||.|.|.+... ...|.|.|||+
T Consensus 2 l~v~vi~a~~L~~------~d~~g~~DPYv~v~~~~----~~~~kT~v~~~t~nP~Wne~f~~~~~~~-~~~l~v~v~d~ 70 (121)
T cd04054 2 LYIRIVEGKNLPA------KDITGSSDPYCIVKVDN----EVIIRTATVWKTLNPFWGEEYTVHLPPG-FHTVSFYVLDE 70 (121)
T ss_pred EEEEEEEeeCCcC------CCCCCCCCceEEEEECC----EeeeeeeeEcCCCCCcccceEEEeeCCC-CCEEEEEEEEC
Confidence 7899999999954 24456789999999854 2346999999999999999999998543 46899999999
Q ss_pred cCCCCCCccEEEEEECCccCCc----ceEEEccCCCCCcccCeEEEEEEE
Q 007734 544 DMSEKDDFGGQTCLPVSELKQG----IRAVPLHDRKGERYKSVKLLMHFE 589 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~~G----yR~vpL~d~~g~~~~~asLlv~i~ 589 (591)
+..++++++|++.++++.+..+ -.|++|....+..-..+.|.+.+.
T Consensus 71 ~~~~~d~~iG~~~~~~~~~~~~~~~~~~W~~L~~~~~~~~~~G~i~l~~~ 120 (121)
T cd04054 71 DTLSRDDVIGKVSLTREVISAHPRGIDGWMNLTEVDPDEEVQGEIHLELS 120 (121)
T ss_pred CCCCCCCEEEEEEEcHHHhccCCCCCCcEEECeeeCCCCccccEEEEEEE
Confidence 9888899999999999887643 368999653322223456666553
No 99
>cd04009 C2B_Munc13-like C2 domain second repeat in Munc13 (mammalian uncoordinated)-like proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, s
Probab=99.48 E-value=2.3e-13 Score=125.06 Aligned_cols=96 Identities=26% Similarity=0.470 Sum_probs=79.8
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCC--CceeeeccccCCCCCCccCcEEEEeeecC----CccE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--DTVMKKTKTLEDNWIPSWNEEFEFPLSVP----ELAL 535 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~--d~~k~kTkvi~nn~NPvWNEtf~F~v~~p----ela~ 535 (591)
..|+|+|++|++|+. .+..+.+||||+|.+.+... ...++||+++++++||+|||+|.|.+... ....
T Consensus 16 ~~L~V~Vi~A~~L~~------~~~~g~~dPyv~v~l~~~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~i~~~~~~~~~~~ 89 (133)
T cd04009 16 QSLRVEILNARNLLP------LDSNGSSDPFVKVELLPRHLFPDVPTPKTQVKKKTLFPLFDESFEFNVPPEQCSVEGAL 89 (133)
T ss_pred CEEEEEEEEeeCCCC------cCCCCCCCCEEEEEEECCCcCccccccccccCcCCCCCccCCEEEEEechhhcccCCCE
Confidence 469999999999964 23446789999999875332 24578999999999999999999998642 2468
Q ss_pred EEEEEEeccCCCCCCccEEEEEECCccC
Q 007734 536 LRIEVHEYDMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 536 Lrf~V~D~d~~~~dd~lGq~~ipL~sL~ 563 (591)
|.|.|||++..+++++||++.++|+.|.
T Consensus 90 l~~~V~d~d~~~~d~~iG~~~i~l~~l~ 117 (133)
T cd04009 90 LLFTVKDYDLLGSNDFEGEAFLPLNDIP 117 (133)
T ss_pred EEEEEEecCCCCCCcEeEEEEEeHHHCC
Confidence 9999999998888999999999999986
No 100
>cd08405 C2B_Synaptotagmin-7 C2 domain second repeat present in Synaptotagmin 7. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves
Probab=99.47 E-value=9.1e-14 Score=128.08 Aligned_cols=113 Identities=18% Similarity=0.176 Sum_probs=88.8
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCC--ccEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--LALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pe--la~Lrf 538 (591)
.+.|.|+|++|++|+. .+..+.+||||+|.+.+......+.||++++++.||+|||+|.|.+...+ ...|.|
T Consensus 14 ~~~L~v~vi~a~~L~~------~~~~g~~dpyV~v~l~~~~~~~~~~kT~v~~~t~~P~wne~F~f~i~~~~~~~~~l~~ 87 (136)
T cd08405 14 ANRITVNIIKARNLKA------MDINGTSDPYVKVWLMYKDKRVEKKKTVIKKRTLNPVFNESFIFNIPLERLRETTLII 87 (136)
T ss_pred CCeEEEEEEEeeCCCc------cccCCCCCceEEEEEEeCCCccccccCcceeCCCCCcccceEEEeCCHHHhCCCEEEE
Confidence 3569999999999953 23456789999999864333334679999999999999999999976433 357999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc-eEEEccCCCCCcc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERY 579 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~Gy-R~vpL~d~~g~~~ 579 (591)
.|||.+..+++++||++.+++.+...+. .|..|+...++++
T Consensus 88 ~v~d~~~~~~~~~lG~~~i~~~~~~~~~~~w~~~~~~~~~~~ 129 (136)
T cd08405 88 TVMDKDRLSRNDLIGKIYLGWKSGGLELKHWKDMLSKPRQPV 129 (136)
T ss_pred EEEECCCCCCCcEeEEEEECCccCCchHHHHHHHHhCCCCch
Confidence 9999998888999999999999874443 4567777666664
No 101
>cd08386 C2A_Synaptotagmin-7 C2A domain first repeat present in Synaptotagmin 7. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves
Probab=99.47 E-value=4.3e-13 Score=121.48 Aligned_cols=103 Identities=21% Similarity=0.244 Sum_probs=82.1
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecC---CccEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP---ELALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~p---ela~Lr 537 (591)
...|.|+|++|++|+. .+..+.+||||+|.+.+ .+..+.||++++++.||+|||+|.|.+... ....|.
T Consensus 15 ~~~L~v~v~~a~~L~~------~d~~~~~dpyv~v~~~~--~~~~~~kT~v~~~t~~P~Wne~f~f~~~~~~~l~~~~l~ 86 (125)
T cd08386 15 ESTLTLKILKAVELPA------KDFSGTSDPFVKIYLLP--DKKHKLETKVKRKNLNPHWNETFLFEGFPYEKLQQRVLY 86 (125)
T ss_pred CCEEEEEEEEecCCCC------ccCCCCCCceEEEEECC--CCCcceeeeeecCCCCCccceeEEEcccCHHHhCCCEEE
Confidence 3569999999999964 23446789999999853 334568999999999999999999975322 235799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc---eEEEc
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPL 571 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL 571 (591)
|.|||+|..+++++||++.++|+.+..|. +|..|
T Consensus 87 ~~v~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~l 123 (125)
T cd08386 87 LQVLDYDRFSRNDPIGEVSLPLNKVDLTEEQTFWKDL 123 (125)
T ss_pred EEEEeCCCCcCCcEeeEEEEecccccCCCCcceEEec
Confidence 99999998888999999999999987663 45555
No 102
>cd04046 C2_Calpain C2 domain present in Calpain proteins. A single C2 domain is found in calpains (EC 3.4.22.52, EC 3.4.22.53), calcium-dependent, non-lysosomal cysteine proteases. Caplains are classified as belonging to Clan CA by MEROPS and include six families: C1, C2, C10, C12, C28, and C47. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of pic
Probab=99.46 E-value=1.7e-12 Score=118.22 Aligned_cols=114 Identities=21% Similarity=0.281 Sum_probs=89.7
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
..|+|+|++|++|.. .+.++.+||||+|.+.+ .+.||++++++.||+|||+|.|.+..+ ...|.|.||
T Consensus 3 ~~~~V~v~~A~~L~~------~d~~g~~dPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~i~V~ 70 (126)
T cd04046 3 VVTQVHVHSAEGLSK------QDSGGGADPYVIIKCEG-----ESVRSPVQKDTLSPEFDTQAIFYRKKP-RSPIKIQVW 70 (126)
T ss_pred EEEEEEEEeCcCCCC------CCCCCCcCccEEEEECC-----EEEEeCccCCCCCCcccceEEEEecCC-CCEEEEEEE
Confidence 358999999999853 24467899999998764 467999999999999999999987654 457999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc-ceEEEccC----CCCCcccCeEEEEEEEE
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQG-IRAVPLHD----RKGERYKSVKLLMHFEF 590 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~G-yR~vpL~d----~~g~~~~~asLlv~i~f 590 (591)
|++... +++||.+.++++.+..+ +++++|.. .+|+. .++|.+++.+
T Consensus 71 d~~~~~-d~~lG~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~--~G~i~~~~~~ 121 (126)
T cd04046 71 NSNLLC-DEFLGQATLSADPNDSQTLRTLPLRKRGRDAAGEV--PGTISVKVTS 121 (126)
T ss_pred ECCCCC-CCceEEEEEecccCCCcCceEEEcccCCCCCCCCC--CCEEEEEEEE
Confidence 998764 89999999999987544 67889953 33333 3567776654
No 103
>cd04014 C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) epsilon. A single C2 domain is found in PKC epsilon. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1 (alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that
Probab=99.46 E-value=8.8e-13 Score=120.87 Aligned_cols=116 Identities=24% Similarity=0.210 Sum_probs=88.6
Q ss_pred eeEEEEEEeccccCcCCCCCc--c--CCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTH--F--DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLR 537 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~--~--d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lr 537 (591)
+.|+|+|+.|++|........ . ...+.+||||+|.+.+ ....+|+++.++.||+|||+|.|.+. +.+.|.
T Consensus 4 g~l~V~v~~a~~L~~~d~~~~~~~~~~~~g~~dpyv~v~~~~----~~~~kT~~~~~t~~P~Wne~f~~~v~--~~~~l~ 77 (132)
T cd04014 4 GTLKIKICEAVDLKPTDWSTRHAVPKKGSQLLDPYVSIDVDD----THIGKTSTKPKTNSPVWNEEFTTEVH--NGRNLE 77 (132)
T ss_pred eEEEEEEEEecCCCCCCchhhhcccccCccCcCcEEEEEECC----EEEeEEeEcCCCCCCCcceeEEEEcC--CCCEEE
Confidence 469999999999953100000 0 0124689999999864 23468999999999999999999986 457899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCC-----cceEEEccCCCCCcccCeEEEEEEEE
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQ-----GIRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~-----GyR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
|.|+|++..++++++|++.++|+.+.. +-.|++|. +.+.|.|++.+
T Consensus 78 ~~v~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~w~~L~-------~~G~l~l~~~~ 128 (132)
T cd04014 78 LTVFHDAAIGPDDFVANCTISFEDLIQRGSGSFDLWVDLE-------PQGKLHVKIEL 128 (132)
T ss_pred EEEEeCCCCCCCceEEEEEEEhHHhcccCCCcccEEEEcc-------CCcEEEEEEEE
Confidence 999998877788999999999999876 25788985 24577777765
No 104
>cd04048 C2A_Copine C2 domain first repeat in Copine. There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 doma
Probab=99.46 E-value=3.8e-13 Score=121.21 Aligned_cols=103 Identities=21% Similarity=0.248 Sum_probs=82.8
Q ss_pred EEeccccCcCCCCCccCCCCCCCceEEEEEeccC--CCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEeccC
Q 007734 468 VYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP--ADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDM 545 (591)
Q Consensus 468 Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p--~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~d~ 545 (591)
.++|++|+. .+..+.+||||+|.+.+.. .....+||++++++.||+|||+|.|.+..++...|+|.|||+|.
T Consensus 6 ~i~a~~L~~------~d~~g~~DPyv~v~~~~~~~~~~~~~~kT~vi~~t~nP~wne~f~f~~~~~~~~~l~~~V~d~d~ 79 (120)
T cd04048 6 SISCRNLLD------KDVLSKSDPFVVVYVKTGGSGQWVEIGRTEVIKNNLNPDFVTTFTVDYYFEEVQKLRFEVYDVDS 79 (120)
T ss_pred EEEccCCCC------CCCCCCCCcEEEEEEEcCCCCceEEeccEeEeCCCCCCCceEEEEEEEEeEeeeEEEEEEEEecC
Confidence 478888853 2445778999999998754 33446899999999999999999999776777889999999996
Q ss_pred ----CCCCCccEEEEEECCccCCc---ceEEEccCCCC
Q 007734 546 ----SEKDDFGGQTCLPVSELKQG---IRAVPLHDRKG 576 (591)
Q Consensus 546 ----~~~dd~lGq~~ipL~sL~~G---yR~vpL~d~~g 576 (591)
.+++++||++.++++.|..+ ..+.+|.+..+
T Consensus 80 ~~~~~~~~d~iG~~~i~l~~l~~~~~~~~~~~l~~~~~ 117 (120)
T cd04048 80 KSKDLSDHDFLGEAECTLGEIVSSPGQKLTLPLKGGKG 117 (120)
T ss_pred CcCCCCCCcEEEEEEEEHHHHhcCCCcEEEEEccCCCc
Confidence 67899999999999999754 24667755444
No 105
>cd08390 C2A_Synaptotagmin-15-17 C2A domain first repeat present in Synaptotagmins 15 and 17. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulat
Probab=99.45 E-value=5.1e-13 Score=120.55 Aligned_cols=104 Identities=19% Similarity=0.232 Sum_probs=83.4
Q ss_pred ceeEEEEEEeccccCcCCCCCccC-CCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d-~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lr 537 (591)
...|.|+|++|++|+.. + ..+.+||||+|.+.. .+...++|++++++.||+|||+|.|.+...++ ..|+
T Consensus 13 ~~~L~V~v~~a~~L~~~------~~~~~~~dpyV~v~l~~--~~~~~~~T~v~~~~~~P~wne~f~f~i~~~~l~~~~l~ 84 (123)
T cd08390 13 EEQLTVSLIKARNLPPR------TKDVAHCDPFVKVCLLP--DERRSLQSKVKRKTQNPNFDETFVFQVSFKELQRRTLR 84 (123)
T ss_pred CCEEEEEEEEecCCCCc------cCCCCCCCcEEEEEEee--CCCCceEeeeEcCCCCCccceEEEEEcCHHHhcccEEE
Confidence 35699999999999641 2 345689999999853 33456789999999999999999999876543 4799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc---eEEEcc
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLH 572 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~ 572 (591)
|.|||.+..+++++||++.++|+.+..+. .|+||-
T Consensus 85 i~v~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~w~~L~ 122 (123)
T cd08390 85 LSVYDVDRFSRHCIIGHVLFPLKDLDLVKGGVVWRDLE 122 (123)
T ss_pred EEEEECCcCCCCcEEEEEEEeccceecCCCceEEEeCC
Confidence 99999998778899999999999987543 566763
No 106
>cd08389 C2A_Synaptotagmin-14_16 C2A domain first repeat present in Synaptotagmins 14 and 16. Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle
Probab=99.45 E-value=4.9e-13 Score=121.54 Aligned_cols=102 Identities=22% Similarity=0.228 Sum_probs=81.1
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEe-eecCC--ccEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPE--LALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~-v~~pe--la~Lr 537 (591)
...|.|+|+.|++|+. .+..+..||||++.+.+ ....++||+++++ .||+|||+|.|. +...+ ...|+
T Consensus 15 ~~~L~V~Vi~a~nL~~------~~~~~~~d~yVk~~llp--~~~~~~kTkv~~~-~nP~fnE~F~f~~i~~~~l~~~~L~ 85 (124)
T cd08389 15 ARKLTVTVIRAQDIPT------KDRGGASSWQVHLVLLP--SKKQRAKTKVQRG-PNPVFNETFTFSRVEPEELNNMALR 85 (124)
T ss_pred CCEEEEEEEEecCCCc------hhcCCCCCcEEEEEEcc--CCcceeecccccC-CCCcccCEEEECCCCHHHhccCEEE
Confidence 3569999999999964 13345679999987754 3346789999887 999999999998 54333 35799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc---eEEEc
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPL 571 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL 571 (591)
|.|+|++..+++++||++.+||+.+..+- .|++|
T Consensus 86 ~~V~~~~~~~~~~~lG~~~i~L~~l~~~~~~~~w~~L 122 (124)
T cd08389 86 FRLYGVERMRKERLIGEKVVPLSQLNLEGETTVWLTL 122 (124)
T ss_pred EEEEECCCcccCceEEEEEEeccccCCCCCceEEEeC
Confidence 99999998888999999999999997652 46665
No 107
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=99.45 E-value=7.4e-14 Score=117.86 Aligned_cols=76 Identities=32% Similarity=0.552 Sum_probs=66.2
Q ss_pred HHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhccCCCCCCCC
Q 007734 26 AVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSP 103 (591)
Q Consensus 26 ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s~~n~~~~~ 103 (591)
||..||.+|+++ ++||+++|++||+++|++..++.++|.+||++|+... ....+..||++||++||+|++|.+++|
T Consensus 1 ei~~if~~ys~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~--~~~~~~~lt~~gF~~fL~S~~N~~~~~ 77 (83)
T PF09279_consen 1 EIEEIFRKYSSDKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDE--RNRQKGQLTLEGFTRFLFSDENSIFDP 77 (83)
T ss_dssp HHHHHHHHHCTTSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHH--HHHCTTEEEHHHHHHHHHSTTCBSS-H
T ss_pred CHHHHHHHHhCCCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccch--hhcccCCcCHHHHHHHHCCCcCCCCCh
Confidence 799999999986 9999999999999999998889999999999998432 123467899999999999999999986
No 108
>cd04026 C2_PKC_alpha_gamma C2 domain in Protein Kinase C (PKC) alpha and gamma. A single C2 domain is found in PKC alpha and gamma. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1(alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transd
Probab=99.44 E-value=7e-13 Score=121.21 Aligned_cols=108 Identities=29% Similarity=0.392 Sum_probs=88.9
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCC-ccEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE-LALLRIEV 540 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pe-la~Lrf~V 540 (591)
..|+|+|++|++|+.. +..+.+||||+|.+.+.+.+..++||++++++.||.|||+|.|.+..++ ...|+|.|
T Consensus 13 ~~l~v~i~~a~nL~~~------~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~wne~f~~~~~~~~~~~~l~v~v 86 (131)
T cd04026 13 NKLTVEVREAKNLIPM------DPNGLSDPYVKLKLIPDPKNETKQKTKTIKKTLNPVWNETFTFDLKPADKDRRLSIEV 86 (131)
T ss_pred CEEEEEEEEeeCCCCc------CCCCCCCCcEEEEEEcCCCCCceecceeecCCCCCCccceEEEeCCchhcCCEEEEEE
Confidence 4699999999999641 2345689999999987666667889999999999999999999987553 35799999
Q ss_pred EeccCCCCCCccEEEEEECCccCCc--ceEEEccCCC
Q 007734 541 HEYDMSEKDDFGGQTCLPVSELKQG--IRAVPLHDRK 575 (591)
Q Consensus 541 ~D~d~~~~dd~lGq~~ipL~sL~~G--yR~vpL~d~~ 575 (591)
||.+..+++++||++.++|+.+..+ -.|++|.+..
T Consensus 87 ~d~~~~~~~~~iG~~~~~l~~l~~~~~~~w~~L~~~~ 123 (131)
T cd04026 87 WDWDRTTRNDFMGSLSFGVSELIKMPVDGWYKLLNQE 123 (131)
T ss_pred EECCCCCCcceeEEEEEeHHHhCcCccCceEECcCcc
Confidence 9998777889999999999998643 4688987643
No 109
>cd08690 C2_Freud-1 C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1). Freud-1 is a novel calcium-regulated repressor that negatively regulates basal 5-HT1A receptor expression in neurons. It may also play a role in the altered regulation of 5-HT1A receptors associated with anxiety or major depression. Freud-1 contains two DM-14 basic repeats, a helix-loop-helix DNA binding domain, and a C2 domain. The Freud-1 C2 domain is thought to be calcium insensitive and it lacks several acidic residues that mediate calcium binding of the PKC C2 domain. In addition, it contains a poly-basic insert that is not present in calcium-dependent C2 domains and may function as a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules tha
Probab=99.44 E-value=2.1e-12 Score=121.57 Aligned_cols=121 Identities=21% Similarity=0.216 Sum_probs=88.8
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCC--------ccE
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--------LAL 535 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pe--------la~ 535 (591)
..++|..+.+++++ ..+..+..||||++++.-......+.||++++++.||+|||+|.|.|.... -..
T Consensus 4 ~el~i~~~~~~~l~----~~~~~~~~DpYVk~~l~~p~~~~~k~KT~v~k~TlnPvfNE~f~f~I~~~~~~~~R~l~~~~ 79 (155)
T cd08690 4 IELTIVRCIGIPLP----SGWNPKDLDTYVKFEFPYPNEEPQSGKTSTIKDTNSPEYNESFKLNINRKHRSFQRVFKRHG 79 (155)
T ss_pred eEEEEEEeeccccC----CCcCCCCCCeEEEEEEecCCCCCceeecCcccCCCCCcccceEEEEeccccchhhhhccCCc
Confidence 45566666664321 123335579999999743234456889999999999999999999985442 135
Q ss_pred EEEEEEeccCC-CCCCccEEEEEECCccCCc--c-eEEEccCCCCCcccCeEEEEEEEE
Q 007734 536 LRIEVHEYDMS-EKDDFGGQTCLPVSELKQG--I-RAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 536 Lrf~V~D~d~~-~~dd~lGq~~ipL~sL~~G--y-R~vpL~d~~g~~~~~asLlv~i~f 590 (591)
|.|.|||.+.. .+|++||++.++|+.|..+ . .+++|++ |...-++.|.|++..
T Consensus 80 L~~~V~d~~~f~~~D~~iG~~~i~L~~l~~~~~~~~~~~L~~--~~k~~Gg~l~v~ir~ 136 (155)
T cd08690 80 LKFEVYHKGGFLRSDKLLGTAQVKLEPLETKCEIHESVDLMD--GRKATGGKLEVKVRL 136 (155)
T ss_pred EEEEEEeCCCcccCCCeeEEEEEEcccccccCcceEEEEhhh--CCCCcCCEEEEEEEe
Confidence 99999999864 4699999999999999544 3 4789985 555667889888753
No 110
>cd04020 C2B_SLP_1-2-3-4 C2 domain second repeat present in Synaptotagmin-like proteins 1-4. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involvin
Probab=99.44 E-value=6.8e-13 Score=126.27 Aligned_cols=97 Identities=22% Similarity=0.268 Sum_probs=79.8
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecC-Cc--cEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP-EL--ALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~p-el--a~Lr 537 (591)
.+.|.|+|++|.+|+. .+..+.+||||+|.+........++||++++++.||+|||+|.|.+..+ ++ ..|.
T Consensus 26 ~g~L~V~Vi~A~nL~~------~d~~g~~DPYVkv~l~~~~~~~~~~kT~vi~~t~nP~WnE~f~f~~~~~~~l~~~~L~ 99 (162)
T cd04020 26 TGELHVWVKEAKNLPA------LKSGGTSDSFVKCYLLPDKSKKSKQKTPVVKKSVNPVWNHTFVYDGVSPEDLSQACLE 99 (162)
T ss_pred CceEEEEEEeeeCCCC------CCCCCCCCCEEEEEEEcCCCCCcceeCCccCCCCCCCCCCEEEEecCCHHHhCCCEEE
Confidence 5679999999999964 2335778999999986544445678999999999999999999985432 22 4799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccC
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~ 563 (591)
|.|||++..+++++||++.++++.+.
T Consensus 100 i~V~d~d~~~~d~~lG~v~i~l~~~~ 125 (162)
T cd04020 100 LTVWDHDKLSSNDFLGGVRLGLGTGK 125 (162)
T ss_pred EEEEeCCCCCCCceEEEEEEeCCccc
Confidence 99999998888999999999999874
No 111
>cd00276 C2B_Synaptotagmin C2 domain second repeat present in Synaptotagmin. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. There are several classes of Synaptotagmins. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distin
Probab=99.44 E-value=2.1e-13 Score=124.61 Aligned_cols=112 Identities=20% Similarity=0.179 Sum_probs=90.9
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCC--ccEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--LALLRIE 539 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pe--la~Lrf~ 539 (591)
..|.|+|++|++|+. .+..+.+||||+|.+.+......+++|+++.++.||.|||+|.|.+..+. ...|+|.
T Consensus 14 ~~L~V~v~~a~~L~~------~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~~~~P~wne~f~f~i~~~~l~~~~l~~~ 87 (134)
T cd00276 14 ERLTVVVLKARNLPP------SDGKGLSDPYVKVSLLQGGKKLKKKKTSVKKGTLNPVFNEAFSFDVPAEQLEEVSLVIT 87 (134)
T ss_pred CEEEEEEEEeeCCCC------ccCCCCCCcEEEEEEEcCCeEeeeecCcceecCCCCeeeeeEEEECCHHHhCCcEEEEE
Confidence 569999999999964 23356789999999986544445779999999999999999999987654 3689999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCcc-eEEEccCCCCCcc
Q 007734 540 VHEYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERY 579 (591)
Q Consensus 540 V~D~d~~~~dd~lGq~~ipL~sL~~Gy-R~vpL~d~~g~~~ 579 (591)
|||.+..+++++||++.++++....+. .|.+|++..|+++
T Consensus 88 v~d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~ 128 (134)
T cd00276 88 VVDKDSVGRNEVIGQVVLGPDSGGEELEHWNEMLASPRKPI 128 (134)
T ss_pred EEecCCCCCCceeEEEEECCCCCCcHHHHHHHHHhCCCCce
Confidence 999987777999999999999943343 4678888777765
No 112
>cd08409 C2B_Synaptotagmin-15 C2 domain second repeat present in Synaptotagmin 15. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 id
Probab=99.44 E-value=4.8e-13 Score=123.72 Aligned_cols=98 Identities=24% Similarity=0.304 Sum_probs=79.4
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 538 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf 538 (591)
...|.|+|+.|++|+. .+ .+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 14 ~~~L~V~V~~a~nL~~------~~-~~~~d~yVkv~l~~~~~~~~~~kT~v~~~~~nP~fnE~F~f~i~~~~l~~~~L~~ 86 (137)
T cd08409 14 LNRLTVVVLRARGLRQ------LD-HAHTSVYVKVSLMIHNKVVKTKKTEVVDGAASPSFNESFSFKVTSRQLDTASLSL 86 (137)
T ss_pred CCeEEEEEEEecCCCc------cc-CCCCCeEEEEEEEECCEEeeeeecccEeCCCCCcccceEEEECCHHHhCccEEEE
Confidence 3569999999999963 23 466899999999864333346799999999999999999999865444 68999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQG 565 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~G 565 (591)
.|||.+..+++++||++.++......|
T Consensus 87 ~V~~~~~~~~~~~lG~v~ig~~~~~~~ 113 (137)
T cd08409 87 SVMQSGGVRKSKLLGRVVLGPFMYARG 113 (137)
T ss_pred EEEeCCCCCCcceEEEEEECCcccCCC
Confidence 999999888899999999997655544
No 113
>cd04044 C2A_Tricalbin-like C2 domain first repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.43 E-value=1.4e-12 Score=117.50 Aligned_cols=119 Identities=22% Similarity=0.215 Sum_probs=92.3
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
+.|+|+|++|++|+.. ....+.+||||+|.+.+. ....||+++.++.||.|||+|.|.+. +....|.|.||
T Consensus 2 g~l~v~v~~a~~L~~~-----~~~~~~~dpyv~v~~~~~---~~~~kT~~~~~~~~P~Wne~~~~~v~-~~~~~l~~~v~ 72 (124)
T cd04044 2 GVLAVTIKSARGLKGS-----DIIGGTVDPYVTFSISNR---RELARTKVKKDTSNPVWNETKYILVN-SLTEPLNLTVY 72 (124)
T ss_pred eEEEEEEEcccCCCcc-----cccCCCCCCeEEEEECCC---CcceEeeeecCCCCCcceEEEEEEeC-CCCCEEEEEEE
Confidence 3589999999999631 012245799999999752 35679999999999999999999987 44568999999
Q ss_pred eccCCCCCCccEEEEEECCccCCcce---EEEccCCCCCcccCeEEEEEEEEC
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~GyR---~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
|.+..+++++||++.++|..+..+.. +.......|++ .++|-|.++|+
T Consensus 73 d~~~~~~d~~iG~~~~~l~~l~~~~~~~~~~~~~~~~~k~--~G~i~~~l~~~ 123 (124)
T cd04044 73 DFNDKRKDKLIGTAEFDLSSLLQNPEQENLTKNLLRNGKP--VGELNYDLRFF 123 (124)
T ss_pred ecCCCCCCceeEEEEEEHHHhccCccccCcchhhhcCCcc--ceEEEEEEEeC
Confidence 99987789999999999999976532 22333456665 46888888875
No 114
>cd04035 C2A_Rabphilin_Doc2 C2 domain first repeat present in Rabphilin and Double C2 domain. Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain
Probab=99.42 E-value=1.1e-12 Score=118.69 Aligned_cols=98 Identities=24% Similarity=0.365 Sum_probs=80.2
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEee-ecCCc--cEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPEL--ALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v-~~pel--a~Lr 537 (591)
...|+|+|++|++|+. .+..+.+||||+|.+.+...+..+.||++++++.||+|||+|.|.. ...++ ..|.
T Consensus 14 ~~~L~V~v~~a~~L~~------~~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~Wne~f~f~~~~~~~~~~~~l~ 87 (123)
T cd04035 14 NSALHCTIIRAKGLKA------MDANGLSDPYVKLNLLPGASKATKLRTKTVHKTRNPEFNETLTYYGITEEDIQRKTLR 87 (123)
T ss_pred CCEEEEEEEEeeCCCC------CCCCCCCCceEEEEEecCCCCCCceeeeeecCCCCCCccceEEEcCCCHHHhCCCEEE
Confidence 3569999999999963 2345678999999997655555678999999999999999999963 33333 4799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCc
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQG 565 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~G 565 (591)
|.|||++.. ++++||++.++|+.|..+
T Consensus 88 ~~v~d~~~~-~~~~iG~~~i~l~~l~~~ 114 (123)
T cd04035 88 LLVLDEDRF-GNDFLGETRIPLKKLKPN 114 (123)
T ss_pred EEEEEcCCc-CCeeEEEEEEEcccCCCC
Confidence 999999877 689999999999999766
No 115
>cd08408 C2B_Synaptotagmin-14_16 C2 domain second repeat present in Synaptotagmins 14 and 16. Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle
Probab=99.41 E-value=8.7e-13 Score=122.22 Aligned_cols=113 Identities=18% Similarity=0.244 Sum_probs=87.2
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCC-ceeeeccccCCCCCCccCcEEEEeeecCCc--cEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 537 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d-~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lr 537 (591)
..+|.|+|+.|.+|+. .+..+.+||||+|.+...... ..++||++++++.||+|||+|.|.+...++ ..|.
T Consensus 14 ~~~L~V~VikarnL~~------~~~~~~~dpyVkv~llp~~~~~~~~~kT~v~~~t~nPvfnEtF~f~i~~~~l~~~~L~ 87 (138)
T cd08408 14 TGRLSVEVIKGSNFKN------LAMNKAPDTYVKLTLLNSDGQEISKSKTSIRRGQPDPEFKETFVFQVALFQLSEVTLM 87 (138)
T ss_pred CCeEEEEEEEecCCCc------cccCCCCCeeEEEEEEeCCCcceeeccceeecCCCCCcEeeeEEEECCHHHhCccEEE
Confidence 3569999999999964 244567899999999753222 246799999999999999999999875444 5899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCc-c-eEEEccCCCCCcc
Q 007734 538 IEVHEYDMSEKDDFGGQTCLPVSELKQG-I-RAVPLHDRKGERY 579 (591)
Q Consensus 538 f~V~D~d~~~~dd~lGq~~ipL~sL~~G-y-R~vpL~d~~g~~~ 579 (591)
|.|||.+..+++++||++.+++.....+ . .|..+++..++++
T Consensus 88 ~~V~~~~~~~~~~~iG~v~l~~~~~~~~~~~hW~~~l~~~~~~v 131 (138)
T cd08408 88 FSVYNKRKMKRKEMIGWFSLGLNSSGEEEEEHWNEMKESKGQQV 131 (138)
T ss_pred EEEEECCCCCCCcEEEEEEECCcCCCchHHHHHHHHHhCCCCEE
Confidence 9999999888899999999999876543 2 3455555555543
No 116
>cd08691 C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-like ubiquitin protein ligase-1). NEDL1 (AKA HECW1(HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1)) is a newly identified HECT-type E3 ubiquitin protein ligase highly expressed in favorable neuroblastomas. In vertebrates it is found primarily in neuronal tissues, including the spinal cord. NEDL1 is thought to normally function in the quality control of cellular proteins by eliminating misfolded proteins. This is thought to be accomplished via a mechanism analogous to that of ER-associated degradation by forming tight complexes and aggregating misfolded proteins that have escaped ubiquitin-mediated degradation. NEDL1, is composed of a C2 domain, two WW domains, and a ubiquitin ligase Hect domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are C
Probab=99.41 E-value=2.9e-12 Score=118.53 Aligned_cols=117 Identities=21% Similarity=0.287 Sum_probs=87.2
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCC--------CceeeeccccCCCCCCcc-CcEEEEeeecCCc
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--------DTVMKKTKTLEDNWIPSW-NEEFEFPLSVPEL 533 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~--------d~~k~kTkvi~nn~NPvW-NEtf~F~v~~pel 533 (591)
.++|++++|++|+. +.++.+||||+|.+.+... +..++||++++++.||+| ||+|.|.+...
T Consensus 2 ~~~~~~~~A~~L~~-------~~fg~~DPyvki~~~~~~~~~~~~~~~~~~~~kT~v~~~tlnP~W~nE~f~f~v~~~-- 72 (137)
T cd08691 2 SFSLSGLQARNLKK-------GMFFNPDPYVKISIQPGKRHIFPALPHHGQECRTSIVENTINPVWHREQFVFVGLPT-- 72 (137)
T ss_pred EEEEEEEEeCCCCC-------ccCCCCCceEEEEEECCCcccccccccccceeeeeeEcCCCCCceEceEEEEEcCCC--
Confidence 36899999999942 3467899999999974322 235789999999999999 99999998543
Q ss_pred cEEEEEEEeccCCCC---CCccEEEEEECCccCCc------ceEEEccCCCCCcccCeEEEEEE
Q 007734 534 ALLRIEVHEYDMSEK---DDFGGQTCLPVSELKQG------IRAVPLHDRKGERYKSVKLLMHF 588 (591)
Q Consensus 534 a~Lrf~V~D~d~~~~---dd~lGq~~ipL~sL~~G------yR~vpL~d~~g~~~~~asLlv~i 588 (591)
..|.|+|||++..++ +++||++.+||++|..| ..+.+|--......-.+.|-+++
T Consensus 73 ~~L~v~V~D~~~~~~~~~~d~lG~~~i~l~~l~~~~~~~~~~~~~~l~k~~~~s~v~G~~~l~~ 136 (137)
T cd08691 73 DVLEIEVKDKFAKSRPIIRRFLGKLSIPVQRLLERHAIGDQELSYTLGRRTPTDHVSGQLTFRF 136 (137)
T ss_pred CEEEEEEEecCCCCCccCCceEEEEEEEHHHhcccccCCceEEEEECCcCCCCCcEEEEEEEEe
Confidence 479999999875433 69999999999999755 24567654444334445666554
No 117
>cd04037 C2E_Ferlin C2 domain fifth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.41 E-value=1.4e-12 Score=118.56 Aligned_cols=91 Identities=20% Similarity=0.364 Sum_probs=77.7
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|+|.|++|++|+. .+..+.+||||+|.+.+. ..+.||++++++.||+|||+|.|.+..++...|.|+|||+
T Consensus 2 lrV~Vi~a~~L~~------~d~~g~~DPYv~v~~~~~---~~~~kT~~v~~t~nP~Wne~f~f~~~~~~~~~L~~~V~d~ 72 (124)
T cd04037 2 VRVYVVRARNLQP------KDPNGKSDPYLKIKLGKK---KINDRDNYIPNTLNPVFGKMFELEATLPGNSILKISVMDY 72 (124)
T ss_pred EEEEEEECcCCCC------CCCCCCCCcEEEEEECCe---eccceeeEEECCCCCccceEEEEEecCCCCCEEEEEEEEC
Confidence 7899999999964 244578899999998652 2346788888999999999999998878778999999999
Q ss_pred cCCCCCCccEEEEEECCccC
Q 007734 544 DMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~ 563 (591)
|..+++++||++.++|+...
T Consensus 73 d~~~~dd~iG~~~i~l~~~~ 92 (124)
T cd04037 73 DLLGSDDLIGETVIDLEDRF 92 (124)
T ss_pred CCCCCCceeEEEEEeecccc
Confidence 98888999999999998765
No 118
>cd04038 C2_ArfGAP C2 domain present in Arf GTPase Activating Proteins (GAP). ArfGAP is a GTPase activating protein which regulates the ADP ribosylation factor Arf, a member of the Ras superfamily of GTP-binding proteins. The GTP-bound form of Arf is involved in Golgi morphology and is involved in recruiting coat proteins. ArfGAP is responsible for the GDP-bound form of Arf which is necessary for uncoating the membrane and allowing the Golgi to fuse with an acceptor compartment. These proteins contain an N-terminal ArfGAP domain containing the characteristic zinc finger motif (Cys-x2-Cys-x(16,17)-x2-Cys) and C-terminal C2 domain. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances i
Probab=99.38 E-value=2.1e-12 Score=120.70 Aligned_cols=91 Identities=30% Similarity=0.434 Sum_probs=77.9
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
+.|+|+|++|.+|+. .+. +.+||||+|.+.+ .+.||++++++.||+|||+|.|.+..+ ...|.|.||
T Consensus 2 G~L~V~Vi~a~nL~~------~d~-~~sDPYV~v~~g~-----~~~kT~vvk~t~nP~WnE~f~f~i~~~-~~~l~~~V~ 68 (145)
T cd04038 2 GLLKVRVVRGTNLAV------RDF-TSSDPYVVLTLGN-----QKVKTRVIKKNLNPVWNEELTLSVPNP-MAPLKLEVF 68 (145)
T ss_pred eEEEEEEEeeECCCC------CCC-CCcCcEEEEEECC-----EEEEeeeEcCCCCCeecccEEEEecCC-CCEEEEEEE
Confidence 469999999999963 133 5689999999853 578999999999999999999998776 567999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQG 565 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~G 565 (591)
|++..++++++|++.+++..|..+
T Consensus 69 D~d~~~~dd~iG~a~i~l~~l~~~ 92 (145)
T cd04038 69 DKDTFSKDDSMGEAEIDLEPLVEA 92 (145)
T ss_pred ECCCCCCCCEEEEEEEEHHHhhhh
Confidence 999888899999999999987554
No 119
>cd08675 C2B_RasGAP C2 domain second repeat of Ras GTPase activating proteins (GAPs). RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin
Probab=99.38 E-value=3.1e-12 Score=118.38 Aligned_cols=104 Identities=29% Similarity=0.348 Sum_probs=85.2
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecC------------
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP------------ 531 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~p------------ 531 (591)
|.|+|+.|++|+. . ..+.+||||+|.+.+ +....++||+++.++.||.|||+|.|.+...
T Consensus 1 L~V~Vi~A~~L~~------~-~~g~~dPyv~v~~~~-~~~~~~~rT~vv~~t~nP~Wne~f~f~~~~~~~~~~~~~~~~~ 72 (137)
T cd08675 1 LSVRVLECRDLAL------K-SNGTCDPFARVTLNY-SSKTDTKRTKVKKKTNNPRFDEAFYFELTIGFSYEKKSFKVEE 72 (137)
T ss_pred CEEEEEEccCCCc------c-cCCCCCcEEEEEEec-CCcCCeeccceeeCCCCCCcceEEEEEcccccccccccccccc
Confidence 5799999999953 1 246789999999875 2445678999999999999999999998764
Q ss_pred ---CccEEEEEEEeccCCCCCCccEEEEEECCccCCc---ceEEEccCCC
Q 007734 532 ---ELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRK 575 (591)
Q Consensus 532 ---ela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~G---yR~vpL~d~~ 575 (591)
....|.|.|||.+..++++|||++.++|..+..+ ..|++|....
T Consensus 73 ~~~~~~~l~i~V~d~~~~~~~~~IG~~~i~l~~l~~~~~~~~W~~L~~~~ 122 (137)
T cd08675 73 EDLEKSELRVELWHASMVSGDDFLGEVRIPLQGLQQAGSHQAWYFLQPRE 122 (137)
T ss_pred ccccccEEEEEEEcCCcCcCCcEEEEEEEehhhccCCCcccceEecCCcC
Confidence 3457999999999877899999999999998654 5788987654
No 120
>cd08686 C2_ABR C2 domain in the Active BCR (Breakpoint cluster region) Related protein. The ABR protein is similar to the breakpoint cluster region protein. It has homology to guanine nucleotide exchange proteins and GTPase-activating proteins (GAPs). ABR is expressed primarily in the brain, but also includes non-neuronal tissues such as the heart. It has been associated with human diseases such as Miller-Dieker syndrome in which mental retardation and malformations of the heart are present. ABR contains a RhoGEF domain and a PH-like domain upstream of its C2 domain and a RhoGAP domain downstream of this domain. A few members also contain a Bcr-Abl oncoprotein oligomerization domain at the very N-terminal end. Splice variants of ABR have been identified. ABR is found in a wide variety of organisms including chimpanzee, dog, mouse, rat, fruit fly, and mosquito. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arr
Probab=99.37 E-value=3.3e-12 Score=114.46 Aligned_cols=92 Identities=26% Similarity=0.357 Sum_probs=72.4
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|.|+|.+|++|. +.+||||++.+.+......+.||++++++.||+|||+|.|.+.. ...|+|.|||+
T Consensus 1 L~V~V~~A~~L~-----------~~sDPYV~l~v~~~~~~~~~~KTk~i~~TlnPvWnE~F~i~l~~--s~~L~~~v~d~ 67 (118)
T cd08686 1 LNVIVHSAQGFK-----------QSANLYCTLEVDSFGYFVKKAKTRVCRDTTEPNWNEEFEIELEG--SQTLRILCYEK 67 (118)
T ss_pred CEEEEEeCCCCC-----------CCCCCEEEEEEcCccccceeeeeeeecCCCCCccceEEEEEeCC--CCEEEEEEEEc
Confidence 679999999983 34799999988753332457899999999999999999999863 44899999998
Q ss_pred -------cCCCCCCccEEEEEECCc--cC-CcceE
Q 007734 544 -------DMSEKDDFGGQTCLPVSE--LK-QGIRA 568 (591)
Q Consensus 544 -------d~~~~dd~lGq~~ipL~s--L~-~GyR~ 568 (591)
|..+.++++|.+.+.|+- +. .|++.
T Consensus 68 ~~~~~~~d~~~~d~~~G~g~i~Ld~~~~~~~~~~~ 102 (118)
T cd08686 68 CYSKVKLDGEGTDAIMGKGQIQLDPQSLQTKKWQE 102 (118)
T ss_pred ccccccccccCcccEEEEEEEEECHHHhccCCeeE
Confidence 455779999888887763 43 36654
No 121
>cd04045 C2C_Tricalbin-like C2 domain third repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.35 E-value=5.5e-12 Score=114.02 Aligned_cols=102 Identities=24% Similarity=0.356 Sum_probs=81.9
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEe
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 542 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 542 (591)
.|+|+|++|++++. .+..+.+||||+|.+.+ ..+.+|+++.++.||+|||+|.|.+..+. ..|+|.|||
T Consensus 2 ~L~V~Vi~a~~L~~------~d~~g~~DPYv~v~~~~----~~~~kT~~~~~t~~P~Wne~f~~~v~~~~-~~L~v~v~d 70 (120)
T cd04045 2 VLRLHIRKANDLKN------LEGVGKIDPYVRVLVNG----IVKGRTVTISNTLNPVWDEVLYVPVTSPN-QKITLEVMD 70 (120)
T ss_pred eEEEEEEeeECCCC------ccCCCCcCCEEEEEECC----EEeeceeEECCCcCCccCceEEEEecCCC-CEEEEEEEE
Confidence 58999999999854 23457889999999854 25678999999999999999999886653 579999999
Q ss_pred ccCCCCCCccEEEEEECCccCCcc--eEEEccCCC
Q 007734 543 YDMSEKDDFGGQTCLPVSELKQGI--RAVPLHDRK 575 (591)
Q Consensus 543 ~d~~~~dd~lGq~~ipL~sL~~Gy--R~vpL~d~~ 575 (591)
++..+++++||++.++|..+..+- .+.-|+|.+
T Consensus 71 ~~~~~~d~~IG~~~~~l~~l~~~~~~~~~~~~~~~ 105 (120)
T cd04045 71 YEKVGKDRSLGSVEINVSDLIKKNEDGKYVEYDDE 105 (120)
T ss_pred CCCCCCCCeeeEEEEeHHHhhCCCCCceEEecCCC
Confidence 998888999999999999987652 344444433
No 122
>cd08676 C2A_Munc13-like C2 domain first repeat in Munc13 (mammalian uncoordinated)-like proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, sy
Probab=99.34 E-value=6.9e-12 Score=118.11 Aligned_cols=103 Identities=29% Similarity=0.403 Sum_probs=80.5
Q ss_pred CCceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCC------------------------CceeeeccccCC
Q 007734 459 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA------------------------DTVMKKTKTLED 514 (591)
Q Consensus 459 p~~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~------------------------d~~k~kTkvi~n 514 (591)
|....|+|+|++|++|+. .+..+.+||||+|.+.+... ....++|+++.+
T Consensus 25 ~~~~~L~V~vi~a~~L~~------~d~~g~~DPyv~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kT~v~~~ 98 (153)
T cd08676 25 PPIFVLKVTVIEAKGLLA------KDVNGFSDPYCMLGIVPASRERNSEKSKKRKSHRKKAVLKDTVPAKSIKVTEVKPQ 98 (153)
T ss_pred CCeEEEEEEEEeccCCcc------cCCCCCCCceEEEEEcccccccccccccccccccccccccccccccccEecceecC
Confidence 445789999999999853 24557799999998853211 012468999999
Q ss_pred CCCCccCcEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccC-Cc-ceEEEc
Q 007734 515 NWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK-QG-IRAVPL 571 (591)
Q Consensus 515 n~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~-~G-yR~vpL 571 (591)
+.||+|||+|.|.+..+....|.|.|||++ +++||++.++++.|. .| ..|.+|
T Consensus 99 tlnP~WnE~F~f~v~~~~~~~L~i~V~D~d----d~~IG~v~i~l~~l~~~~~d~W~~L 153 (153)
T cd08676 99 TLNPVWNETFRFEVEDVSNDQLHLDIWDHD----DDFLGCVNIPLKDLPSCGLDSWFKL 153 (153)
T ss_pred CCCCccccEEEEEeccCCCCEEEEEEEecC----CCeEEEEEEEHHHhCCCCCCCeEeC
Confidence 999999999999987655678999999987 789999999999987 23 245554
No 123
>cd04013 C2_SynGAP_like C2 domain present in Ras GTPase activating protein (GAP) family. SynGAP, GAP1, RasGAP, and neurofibromin are all members of the Ras-specific GAP (GTPase-activating protein) family. SynGAP regulates the MAP kinase signaling pathway and is critical for cognition and synapse function. Mutations in this gene causes mental retardation in humans. SynGAP contains a PH-like domain, a C2 domain, and a Ras-GAP domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at leas
Probab=99.34 E-value=1.4e-11 Score=114.89 Aligned_cols=114 Identities=18% Similarity=0.321 Sum_probs=92.5
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V 540 (591)
...|.|.|+.|++||. ..+|||+|.+.+ ....||+++.++.||.|+|.|.|....+ ...|.|.|
T Consensus 10 ~~sL~v~V~EAk~Lp~-----------~~~~Y~~i~Ld~----~~vaRT~v~~~~~nP~W~E~F~f~~~~~-~~~l~v~v 73 (146)
T cd04013 10 ENSLKLWIIEAKGLPP-----------KKRYYCELCLDK----TLYARTTSKLKTDTLFWGEHFEFSNLPP-VSVITVNL 73 (146)
T ss_pred EEEEEEEEEEccCCCC-----------cCCceEEEEECC----EEEEEEEEEcCCCCCcceeeEEecCCCc-ccEEEEEE
Confidence 4569999999999964 136899999986 3446999999999999999999975433 45689999
Q ss_pred EeccC-CC---CCCccEEEEEECCccCCcc---eEEEccCCCCCc--------ccCeEEEEEEEE
Q 007734 541 HEYDM-SE---KDDFGGQTCLPVSELKQGI---RAVPLHDRKGER--------YKSVKLLMHFEF 590 (591)
Q Consensus 541 ~D~d~-~~---~dd~lGq~~ipL~sL~~Gy---R~vpL~d~~g~~--------~~~asLlv~i~f 590 (591)
+..+. .+ ++++||.+.||+..+..|. +|.||.+.+|.+ -++++|-|++.|
T Consensus 74 ~k~~~~~~~~~~~~~IG~V~Ip~~~l~~~~~ve~Wfpl~~~~~~~~~~~~~~~~~~~~lrik~rf 138 (146)
T cd04013 74 YRESDKKKKKDKSQLIGTVNIPVTDVSSRQFVEKWYPVSTPKGNGKSGGKEGKGESPSIRIKARY 138 (146)
T ss_pred EEccCccccccCCcEEEEEEEEHHHhcCCCcccEEEEeecCCCCCccccccccCCCCEEEEEEEE
Confidence 65442 21 4789999999999999884 799999999996 566899999887
No 124
>cd04049 C2_putative_Elicitor-responsive_gene C2 domain present in the putative elicitor-responsive gene. In plants elicitor-responsive proteins are triggered in response to specific elicitor molecules such as glycolproteins, peptides, carbohydrates and lipids. A host of defensive responses are also triggered resulting in localized cell death. Antimicrobial secondary metabolites, such as phytoalexins, or defense-related proteins, including pathogenesis-related (PR) proteins are also produced. There is a single C2 domain present here. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contai
Probab=99.33 E-value=6.9e-12 Score=113.53 Aligned_cols=91 Identities=25% Similarity=0.368 Sum_probs=75.9
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCC-CCCCccCcEEEEeeecCC---ccEEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPE---LALLRI 538 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~n-n~NPvWNEtf~F~v~~pe---la~Lrf 538 (591)
.|.|+|++|++|+. .+..+.+||||+|.+.+ ..++|+++.+ +.||+|||+|.|.+..+. ...|.|
T Consensus 2 ~L~V~V~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~~T~~~~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v 70 (124)
T cd04049 2 TLEVLLISAKGLQD------TDFLGKIDPYVIIQCRT-----QERKSKVAKGDGRNPEWNEKFKFTVEYPGWGGDTKLIL 70 (124)
T ss_pred eEEEEEEecCCCCC------CCCCCCcCceEEEEECC-----EeeeeeEcCCCCCCCcccceEEEEecCcccCCCCEEEE
Confidence 58999999999953 23456789999999853 4568888875 799999999999998763 467999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCC
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQ 564 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~ 564 (591)
.|||.+..+++++||++.++|.++..
T Consensus 71 ~V~d~~~~~~d~~iG~~~i~l~~l~~ 96 (124)
T cd04049 71 RIMDKDNFSDDDFIGEATIHLKGLFE 96 (124)
T ss_pred EEEECccCCCCCeEEEEEEEhHHhhh
Confidence 99999988789999999999999854
No 125
>cd04021 C2_E3_ubiquitin_ligase C2 domain present in E3 ubiquitin ligase. E3 ubiquitin ligase is part of the ubiquitylation mechanism responsible for controlling surface expression of membrane proteins. The sequential action of several enzymes are involved: ubiquitin-activating enzyme E1, ubiquitin-conjugating enzyme E2, and ubiquitin-protein ligase E3 which is responsible for substrate recognition and promoting the transfer of ubiquitin to the target protein. E3 ubiquitin ligase is composed of an N-terminal C2 domain, 4 WW domains, and a HECTc domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction e
Probab=99.32 E-value=1.4e-11 Score=112.09 Aligned_cols=114 Identities=22% Similarity=0.278 Sum_probs=85.7
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
.+|.|+|++|+.+.. +..+.+||||+|.+.+. ...||+++.++.||+|||+|.|.+. +...|.|.||
T Consensus 2 ~~L~V~i~~a~l~~~-------~~~~~~dPyv~v~~~~~----~~~kT~v~~~t~~P~Wne~f~~~~~--~~~~l~~~V~ 68 (125)
T cd04021 2 SQLQITVESAKLKSN-------SKSFKPDPYVEVTVDGQ----PPKKTEVSKKTSNPKWNEHFTVLVT--PQSTLEFKVW 68 (125)
T ss_pred ceEEEEEEeeECCCC-------CcCCCCCeEEEEEECCc----ccEEeeeeCCCCCCccccEEEEEeC--CCCEEEEEEE
Confidence 358999999983321 22567899999998652 3679999999999999999999875 3468999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc-------c-eEEEccCCCC-CcccCeEEEEEE
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQG-------I-RAVPLHDRKG-ERYKSVKLLMHF 588 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~G-------y-R~vpL~d~~g-~~~~~asLlv~i 588 (591)
|++..+.+++||++.++|+.+..+ + -+++|..+.. .....+.|.+.+
T Consensus 69 d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 124 (125)
T cd04021 69 SHHTLKADVLLGEASLDLSDILKNHNGKLENVKLTLNLSSENKGSSVKVGELTVIL 124 (125)
T ss_pred eCCCCCCCcEEEEEEEEHHHhHhhcCCCccceEEEEEEEccCCCcceeeeeEEEEe
Confidence 999888899999999999998642 2 2677765441 223345676655
No 126
>cd08394 C2A_Munc13 C2 domain first repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi
Probab=99.32 E-value=9.4e-12 Score=112.91 Aligned_cols=94 Identities=21% Similarity=0.296 Sum_probs=76.3
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
..|.|+|+.|++++. + +..||||+|.+.+ .+.+|++++++ ||.|||+|.|.+..++.. |.|.||
T Consensus 2 ~~L~V~Vv~Ar~L~~----~-----~~~dPYV~Ik~g~-----~k~kT~v~~~~-nP~WnE~F~F~~~~~~~~-L~v~V~ 65 (127)
T cd08394 2 SLLCVLVKKAKLDGA----P-----DKFNTYVTLKVQN-----VKSTTIAVRGS-QPCWEQDFMFEINRLDLG-LVIELW 65 (127)
T ss_pred ceEEEEEEEeeCCCC----C-----CCCCCeEEEEECC-----EEeEeeECCCC-CCceeeEEEEEEcCCCCE-EEEEEE
Confidence 359999999999842 1 2348999999853 57789988775 999999999999765544 999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc-----ceEEEcc
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQG-----IRAVPLH 572 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~G-----yR~vpL~ 572 (591)
|+|.. .||++|++.|||+.+..+ -.|+||.
T Consensus 66 dkd~~-~DD~lG~v~i~L~~v~~~~~~~~~~Wy~L~ 100 (127)
T cd08394 66 NKGLI-WDTLVGTVWIPLSTIRQSNEEGPGEWLTLD 100 (127)
T ss_pred eCCCc-CCCceEEEEEEhHHcccCCCCCCCccEecC
Confidence 99965 699999999999998643 3577876
No 127
>PLN03008 Phospholipase D delta
Probab=99.32 E-value=1.3e-11 Score=140.24 Aligned_cols=99 Identities=22% Similarity=0.448 Sum_probs=86.4
Q ss_pred CCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcc
Q 007734 487 SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI 566 (591)
Q Consensus 487 ~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~Gy 566 (591)
+.+||||+|.+.+ ....||++++++.||+|||+|.|.+..+. ..|.|+|+|+|.++ +++||++.|||..|.+|.
T Consensus 75 ~tSDPYV~I~Lg~----~rv~RTrVi~n~~NPvWNE~F~f~vah~~-s~L~f~VkD~D~~g-aD~IG~a~IPL~~L~~Ge 148 (868)
T PLN03008 75 ITSDPYVTVVVPQ----ATLARTRVLKNSQEPLWDEKFNISIAHPF-AYLEFQVKDDDVFG-AQIIGTAKIPVRDIASGE 148 (868)
T ss_pred CCCCceEEEEECC----cceeeEEeCCCCCCCCcceeEEEEecCCC-ceEEEEEEcCCccC-CceeEEEEEEHHHcCCCC
Confidence 4679999999943 34569999999999999999999998764 57999999999887 699999999999999995
Q ss_pred ---eEEEccCCCCCcccC-eEEEEEEEEC
Q 007734 567 ---RAVPLHDRKGERYKS-VKLLMHFEFI 591 (591)
Q Consensus 567 ---R~vpL~d~~g~~~~~-asLlv~i~f~ 591 (591)
+|++|.+..|++... +.|.|.++|.
T Consensus 149 ~vd~Wl~Ll~~~~kp~k~~~kl~v~lqf~ 177 (868)
T PLN03008 149 RISGWFPVLGASGKPPKAETAIFIDMKFT 177 (868)
T ss_pred ceEEEEEccccCCCCCCCCcEEEEEEEEE
Confidence 799999999999844 7999998874
No 128
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.31 E-value=1.6e-12 Score=135.59 Aligned_cols=96 Identities=30% Similarity=0.494 Sum_probs=85.2
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc-cEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 540 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel-a~Lrf~V 540 (591)
..|+|+|..|.+|.. .|.++.+||||++.+...|....|+||++++.++||+|||+|.|.+...+. ..|.+.|
T Consensus 180 ~~l~v~i~ea~NLiP------MDpNGlSDPYvk~kliPD~~~~sKqKTkTik~~LNP~wNEtftf~Lkp~DkdrRlsiEv 253 (683)
T KOG0696|consen 180 DVLTVTIKEAKNLIP------MDPNGLSDPYVKLKLIPDPKNESKQKTKTIKATLNPVWNETFTFKLKPSDKDRRLSIEV 253 (683)
T ss_pred ceEEEEehhhccccc------cCCCCCCCcceeEEeccCCcchhhhhhhhhhhhcCccccceeEEecccccccceeEEEE
Confidence 458899999999843 466788999999999998888899999999999999999999999976554 5799999
Q ss_pred EeccCCCCCCccEEEEEECCccC
Q 007734 541 HEYDMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 541 ~D~d~~~~dd~lGq~~ipL~sL~ 563 (591)
||||..+++||.|...+.++.|.
T Consensus 254 WDWDrTsRNDFMGslSFgisEl~ 276 (683)
T KOG0696|consen 254 WDWDRTSRNDFMGSLSFGISELQ 276 (683)
T ss_pred ecccccccccccceecccHHHHh
Confidence 99999999999999999999885
No 129
>cd08383 C2A_RasGAP C2 domain (first repeat) of Ras GTPase activating proteins (GAPs). RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain either a single C2 domain or two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2
Probab=99.31 E-value=3.4e-11 Score=107.43 Aligned_cols=113 Identities=21% Similarity=0.304 Sum_probs=83.4
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEEEEE
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVH 541 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf~V~ 541 (591)
|+|+|+.|.+|+. . +.+||||.|.+.+ ...+||+++.+ .||.|||+|.|.+...++ ..|.|.|+
T Consensus 2 L~v~vi~a~~l~~----~-----~~~dpyv~v~~~~----~~~~kT~~~~~-~~P~Wne~f~f~v~~~~~~~~~l~i~v~ 67 (117)
T cd08383 2 LRLRILEAKNLPS----K-----GTRDPYCTVSLDQ----VEVARTKTVEK-LNPFWGEEFVFDDPPPDVTFFTLSFYNK 67 (117)
T ss_pred eEEEEEEecCCCc----C-----CCCCceEEEEECC----EEeEecceEEC-CCCcccceEEEecCCccccEEEEEEEEE
Confidence 7899999999963 1 4689999999865 23578999988 999999999999876554 35777788
Q ss_pred eccCCCCCCccEEEEEECCccCCcc-eEEEccCCCCCcccCeEEEEEEEE
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~Gy-R~vpL~d~~g~~~~~asLlv~i~f 590 (591)
|.+...++.++|.+.+....+..+. .|++|....+.....+.|.+.+.|
T Consensus 68 d~~~~~~~~~~g~v~l~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 117 (117)
T cd08383 68 DKRSKDRDIVIGKVALSKLDLGQGKDEWFPLTPVDPDSEVQGSVRLRARY 117 (117)
T ss_pred ecccCCCeeEEEEEEecCcCCCCcceeEEECccCCCCCCcCceEEEEEEC
Confidence 8775555566676555544443333 588998776655556788888765
No 130
>cd04052 C2B_Tricalbin-like C2 domain second repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.28 E-value=2.6e-11 Score=107.90 Aligned_cols=97 Identities=18% Similarity=0.252 Sum_probs=79.1
Q ss_pred CCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccC
Q 007734 484 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 484 d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~ 563 (591)
...+.+||||+|.+.+ ...++|+++.++.||+|||+|.|.+..+....|.|.|+|++.. ++++||.+.+||+.+.
T Consensus 8 ~~~G~~dPYv~v~v~~----~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~i~v~d~~~~-~d~~iG~~~v~L~~l~ 82 (111)
T cd04052 8 SKTGLLSPYAELYLNG----KLVYTTRVKKKTNNPSWNASTEFLVTDRRKSRVTVVVKDDRDR-HDPVLGSVSISLNDLI 82 (111)
T ss_pred ccCCCCCceEEEEECC----EEEEEEeeeccCCCCccCCceEEEecCcCCCEEEEEEEECCCC-CCCeEEEEEecHHHHH
Confidence 4457789999999964 2457899998899999999999998766556799999999987 7999999999999873
Q ss_pred -C---cceEEEccCCCCCcccCeEEEEEEEE
Q 007734 564 -Q---GIRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 564 -~---GyR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
. +.+|.+|.+ .+.+.|.+++.|
T Consensus 83 ~~~~~~~~w~~L~~-----~~~G~i~~~~~~ 108 (111)
T cd04052 83 DATSVGQQWFPLSG-----NGQGRIRISALW 108 (111)
T ss_pred hhhhccceeEECCC-----CCCCEEEEEEEE
Confidence 2 357889965 235788888876
No 131
>PF00168 C2: C2 domain; InterPro: IPR000008 The C2 domain is a Ca2+-dependent membrane-targeting module found in many cellular proteins involved in signal transduction or membrane trafficking. C2 domains are unique among membrane targeting domains in that they show wide range of lipid selectivity for the major components of cell membranes, including phosphatidylserine and phosphatidylcholine. This C2 domain is about 116 amino-acid residues and is located between the two copies of the C1 domain in Protein Kinase C (that bind phorbol esters and diacylglycerol) (see PDOC00379 from PROSITEDOC) and the protein kinase catalytic domain (see PDOC00100 from PROSITEDOC). Regions with significant homology [] to the C2-domain have been found in many proteins. The C2 domain is thought to be involved in calcium-dependent phospholipid binding [] and in membrane targetting processes such as subcellular localisation. The 3D structure of the C2 domain of synaptotagmin has been reported [], the domain forms an eight-stranded beta sandwich constructed around a conserved 4-stranded motif, designated a C2 key []. Calcium binds in a cup-shaped depression formed by the N- and C-terminal loops of the C2-key motif. Structural analyses of several C2 domains have shown them to consist of similar ternary structures in which three Ca2+-binding loops are located at the end of an 8 stranded antiparallel beta sandwich. ; GO: 0005515 protein binding; PDB: 1RSY_A 1BYN_A 3NSJ_A 3QR1_D 3HN8_C 1DQV_A 3M7F_B 3KWU_A 3KWT_A 1V27_A ....
Probab=99.26 E-value=1.7e-11 Score=101.89 Aligned_cols=85 Identities=38% Similarity=0.536 Sum_probs=73.6
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|+|+|++|++|+. .+..+.+||||+|.+.+.+. ..++|+++.++.+|.|||+|.|.+..++.+.|.|.|||.
T Consensus 1 L~v~I~~a~~L~~------~~~~~~~~~yv~v~~~~~~~--~~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~~~V~~~ 72 (85)
T PF00168_consen 1 LTVTIHSARNLPS------KDSNGKPDPYVRVSVNGSES--TKYKTKVKKNTSNPVWNEEFEFPLDDPDLDSLSFEVWDK 72 (85)
T ss_dssp EEEEEEEEESSSS------SSTTSSBEEEEEEEEETTTC--EEEEECCBSSBSSEEEEEEEEEEESHGCGTEEEEEEEEE
T ss_pred CEEEEEEEECCCC------cccCCcccccceeecceeee--eeeeeeeeeccccceeeeeeeeeeecccccceEEEEEEC
Confidence 7899999999964 12345689999999987554 668999999999999999999999888888899999999
Q ss_pred cCCCCCCccEEEE
Q 007734 544 DMSEKDDFGGQTC 556 (591)
Q Consensus 544 d~~~~dd~lGq~~ 556 (591)
+..+++++||+++
T Consensus 73 ~~~~~~~~iG~~~ 85 (85)
T PF00168_consen 73 DSFGKDELIGEVK 85 (85)
T ss_dssp TSSSSEEEEEEEE
T ss_pred CCCCCCCEEEEEC
Confidence 9888899999974
No 132
>cd04047 C2B_Copine C2 domain second repeat in Copine. There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 dom
Probab=99.24 E-value=4e-11 Score=106.15 Aligned_cols=98 Identities=21% Similarity=0.328 Sum_probs=74.5
Q ss_pred EEEeccccCcCCCCCccCCCCCCCceEEEEEeccC-CCceeeeccccCCCCCCccCcEEEEeee---cCC-ccEEEEEEE
Q 007734 467 TVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP-ADTVMKKTKTLEDNWIPSWNEEFEFPLS---VPE-LALLRIEVH 541 (591)
Q Consensus 467 ~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p-~d~~k~kTkvi~nn~NPvWNEtf~F~v~---~pe-la~Lrf~V~ 541 (591)
-.++|++|+. .+..+.+||||+|.+.+.. .....+||++++++.||+|| +|.|.+. ..+ ...|+|.||
T Consensus 5 ~~i~a~~L~~------~d~~~~~DPyv~v~~~~~~~~~~~~~kT~vi~~t~nP~Wn-~f~~~~~~l~~~~~~~~l~~~V~ 77 (110)
T cd04047 5 LQFSGKKLDK------KDFFGKSDPFLEISRQSEDGTWVLVYRTEVIKNTLNPVWK-PFTIPLQKLCNGDYDRPIKIEVY 77 (110)
T ss_pred EEEEeCCCCC------CCCCCCCCeeEEEEEECCCCCEEEEEeeeEeccCCCCceE-EEEEEHHHhcCCCcCCEEEEEEE
Confidence 4568888853 2456789999999987532 12346799999999999999 6777643 222 468999999
Q ss_pred eccCCCCCCccEEEEEECCccCCcc-eEEEc
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQGI-RAVPL 571 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~Gy-R~vpL 571 (591)
|++..+++++||++.++++.|..+. +.+.+
T Consensus 78 d~d~~~~d~~iG~~~~~l~~l~~~~~~~~~~ 108 (110)
T cd04047 78 DYDSSGKHDLIGEFETTLDELLKSSPLEFEL 108 (110)
T ss_pred EeCCCCCCcEEEEEEEEHHHHhcCCCceEEe
Confidence 9998888999999999999998553 34443
No 133
>cd08555 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily. The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosph
Probab=99.22 E-value=5.6e-11 Score=114.80 Aligned_cols=98 Identities=27% Similarity=0.411 Sum_probs=84.2
Q ss_pred ccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc------ccchHHHHHHHHhhhccccC
Q 007734 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT------APVELIKCLRSIKEYAFVAS 195 (591)
Q Consensus 122 SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt------s~i~f~dvi~aI~~~AF~~S 195 (591)
.+|+-|....+ +.+..+|..||..|||.||+|||...| +.|||.|+.++. ...+|.||++.++++++ .+
T Consensus 2 iaHRG~~~~~p---eNT~~af~~a~~~G~~~iE~DV~lt~D-g~lvv~HD~~~~r~~~~~~~ptl~evl~~~~~~~~-~~ 76 (179)
T cd08555 2 LSHRGYSQNGQ---ENTLEAFYRALDAGARGLELDVRLTKD-GELVVYHGPTLDRTTAGILPPTLEEVLELIADYLK-NP 76 (179)
T ss_pred EecCCCCCCCC---ccHHHHHHHHHHcCCCEEEEEEeEcCC-CeEEEECCCccccccCCCCCCCHHHHHHHHHhhhh-cC
Confidence 37888766555 888999999999999999999998766 479999999986 56889999999999999 88
Q ss_pred CCceEEeeccCCCH----HHHHHHHHHHHHHhh
Q 007734 196 EYPVVITLEDHLTP----DLQAKVAEMVTQTLG 224 (591)
Q Consensus 196 ~yPvILSlE~Hcs~----~qQ~~ma~~l~~~~G 224 (591)
.+|++|.||.+++. .++..+++.+++..+
T Consensus 77 ~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~~~~ 109 (179)
T cd08555 77 DYTIILSLEIKQDSPEYDEFLAKVLKELRVYFD 109 (179)
T ss_pred CCceEEEEEeCCCCCcchHHHHHHHHHHHHcCC
Confidence 89999999999874 666777777776653
No 134
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.15 E-value=2.5e-10 Score=124.21 Aligned_cols=121 Identities=23% Similarity=0.292 Sum_probs=94.0
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE 539 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf~ 539 (591)
..|.|+|+.|.+|+.. +..+.+||||++.+.. ....+.+|+++++++||+|||+|.|.|...++ ..|.|.
T Consensus 167 ~~L~V~V~qa~~Lp~~------d~~g~sdpyVK~~llP--dk~~k~kT~v~r~tlnP~fnEtf~f~v~~~~l~~~~L~l~ 238 (421)
T KOG1028|consen 167 NLLTVRVIQAHDLPAK------DRGGTSDPYVKVYLLP--DKKGKFKTRVHRKTLNPVFNETFRFEVPYEELSNRVLHLS 238 (421)
T ss_pred CEEEEEEEEecCCCcc------cCCCCCCCeeEEEEcC--CCCCcceeeeeecCcCCccccceEeecCHHHhccCEEEEE
Confidence 4599999999999742 2235689999999874 44678899999999999999999999776555 579999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCcc---eEEEccCCCCCcccC-eEEEEEEEE
Q 007734 540 VHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKS-VKLLMHFEF 590 (591)
Q Consensus 540 V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d~~g~~~~~-asLlv~i~f 590 (591)
|||.|.++++++||++.+||..+.... .|.+|....-..-.. +-|++...+
T Consensus 239 V~~~drfsr~~~iGev~~~l~~~~~~~~~~~w~~l~~~~~~~~~~~gel~~sL~Y 293 (421)
T KOG1028|consen 239 VYDFDRFSRHDFIGEVILPLGEVDLLSTTLFWKDLQPSSTDSEELAGELLLSLCY 293 (421)
T ss_pred EEecCCcccccEEEEEEecCccccccccceeeeccccccCCcccccceEEEEEEe
Confidence 999999999999999999999887665 477776532222111 466665554
No 135
>smart00239 C2 Protein kinase C conserved region 2 (CalB). Ca2+-binding motif present in phospholipases, protein kinases C, and synaptotamins (among others). Some do not appear to contain Ca2+-binding sites. Particular C2s appear to bind phospholipids, inositol polyphosphates, and intracellular proteins. Unusual occurrence in perforin. Synaptotagmin and PLC C2s are permuted in sequence with respect to N- and C-terminal beta strands. SMART detects C2 domains using one or both of two profiles.
Probab=99.13 E-value=4.3e-10 Score=95.44 Aligned_cols=99 Identities=38% Similarity=0.556 Sum_probs=81.1
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|.|.|+.|+++... ......+|||++++.+.. ....+|+++.++.||.|||+|.|.+..+....|.|.|||.
T Consensus 2 l~i~i~~~~~l~~~------~~~~~~~~yv~v~~~~~~--~~~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~i~v~~~ 73 (101)
T smart00239 2 LTVKIISARNLPKK------DKKGKSDPYVKVSLDGDP--KEKKKTKVVKNTLNPVWNETFEFEVPPPELAELEIEVYDK 73 (101)
T ss_pred eEEEEEEeeCCCCC------CCCCCCCceEEEEEeCCc--cceEeeeEecCCCCCcccceEEEEecCcccCEEEEEEEec
Confidence 78999999988531 122457999999997632 3467899999889999999999998776567899999998
Q ss_pred cCCCCCCccEEEEEECCccCCcceEEE
Q 007734 544 DMSEKDDFGGQTCLPVSELKQGIRAVP 570 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~~GyR~vp 570 (591)
+..+.+.++|.+.+++..+..|+++.+
T Consensus 74 ~~~~~~~~~G~~~~~l~~~~~~~~~~~ 100 (101)
T smart00239 74 DRFGRDDFIGQVTIPLSDLLLGGRHEK 100 (101)
T ss_pred CCccCCceeEEEEEEHHHcccCccccC
Confidence 876668999999999999999887643
No 136
>PLN03200 cellulose synthase-interactive protein; Provisional
Probab=99.03 E-value=9.1e-10 Score=135.78 Aligned_cols=114 Identities=16% Similarity=0.311 Sum_probs=92.4
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCc-cEEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIE 539 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pel-a~Lrf~ 539 (591)
.+.|+|+|+.|+++. ..++.+||||.|.+.. ..++||+++++|.||+|||+|+|.+..|.. ..|.|.
T Consensus 1979 ~G~L~V~V~~a~nl~--------~~~~~sdPyv~l~~g~----~~~~kTkvvk~~~nP~Wne~f~~~~~~p~~~~~l~ie 2046 (2102)
T PLN03200 1979 PGSLTVTIKRGNNLK--------QSMGNTNAFCKLTLGN----GPPRQTKVVSHSSSPEWKEGFTWAFDSPPKGQKLHIS 2046 (2102)
T ss_pred CcceEEEEeeccccc--------cccCCCCCeEEEEECC----CCcccccccCCCCCCCcccceeeeecCCCCCCceEEE
Confidence 467999999999984 2246789999999874 236689999999999999999999987754 459999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCcc---eEEEccC---CCCCcccCeEEEEEEEE
Q 007734 540 VHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHD---RKGERYKSVKLLMHFEF 590 (591)
Q Consensus 540 V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d---~~g~~~~~asLlv~i~f 590 (591)
|||+|..+ +|.+|.+.|++..+-.+- -+++|.+ ++|.+ -+|.++|+|
T Consensus 2047 v~d~d~f~-kd~~G~~~i~l~~vv~~~~~~~~~~L~~~~~k~G~~---~~~~~e~~w 2099 (2102)
T PLN03200 2047 CKSKNTFG-KSSLGKVTIQIDRVVMEGTYSGEYSLNPESNKDGSS---RTLEIEFQW 2099 (2102)
T ss_pred EEecCccC-CCCCceEEEEHHHHhcCceeeeeeecCcccccCCCc---ceEEEEEEe
Confidence 99999885 569999999999987553 3689985 45553 368888887
No 137
>cd08374 C2F_Ferlin C2 domain sixth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.01 E-value=1.6e-09 Score=99.42 Aligned_cols=97 Identities=24% Similarity=0.257 Sum_probs=78.6
Q ss_pred EEEEEEeccccCcCCCCCccCCCC--CCCceEEEEEeccCCCceeeeccccCCCCC--CccCcEEEEeeec---------
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYS--PPDFYARVGIAGVPADTVMKKTKTLEDNWI--PSWNEEFEFPLSV--------- 530 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~--~~DpyV~V~i~g~p~d~~k~kTkvi~nn~N--PvWNEtf~F~v~~--------- 530 (591)
|+|.|..+++++... .+..+ .+||||++.+.+. ...+++|.++.+++| |+||+.|.|.+..
T Consensus 2 LRViIw~~~~v~~~~----~~~~g~~~sD~yVK~~L~~~--~~~kqkTDVHyrslnG~~~FNwRfvF~~~~~~~~~~~~~ 75 (133)
T cd08374 2 LRVIVWNTRDVLNDD----TNITGEKMSDIYVKGWLDGL--EEDKQKTDVHYRSLDGEGNFNWRFVFPFDYLPAEKKIVV 75 (133)
T ss_pred EEEEEEECcCCcccc----cccCCccccCeEEEEEEccC--cccccccceEEecCCCCcEEeEEEEEeeecCCccceeEE
Confidence 789999999975421 12223 4899999999875 356789999999988 9999999998765
Q ss_pred ------------CCc--cEEEEEEEeccCCCCCCccEEEEEECCccCCcc
Q 007734 531 ------------PEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI 566 (591)
Q Consensus 531 ------------pel--a~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~Gy 566 (591)
.++ ..|.++|||.|..+++++||+..++|..|.+|.
T Consensus 76 ~~~~~~~~~~~~e~~~~~~L~lqvwD~D~~s~dd~iG~~~l~l~~l~~~~ 125 (133)
T cd08374 76 IKKEHFWSLDETEYKIPPKLTLQVWDNDKFSPDDFLGSLELDLSILPRPA 125 (133)
T ss_pred EeeccccccCcceEecCcEEEEEEEECcccCCCCcceEEEEEhhhccccc
Confidence 222 579999999999999999999999999998765
No 138
>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.98 E-value=9.5e-10 Score=119.24 Aligned_cols=116 Identities=25% Similarity=0.372 Sum_probs=88.9
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
.+++++|++|++|.. .|..|.+||||.+.+. ..++||++|..++||+|||.|+|.+++. ...|++.||
T Consensus 295 akitltvlcaqgl~a------kdktg~sdpyvt~qv~-----ktkrrtrti~~~lnpvw~ekfhfechns-tdrikvrvw 362 (1283)
T KOG1011|consen 295 AKITLTVLCAQGLIA------KDKTGKSDPYVTAQVG-----KTKRRTRTIHQELNPVWNEKFHFECHNS-TDRIKVRVW 362 (1283)
T ss_pred eeeEEeeeeccccee------cccCCCCCCcEEEeec-----ccchhhHhhhhccchhhhhheeeeecCC-CceeEEEEe
Confidence 458899999999954 2445789999999886 3688999999999999999999999865 346999999
Q ss_pred eccCC-----------CCCCccEEEEEECCccCCc-ceEEEccCCCCCcccCeEEEEEEE
Q 007734 542 EYDMS-----------EKDDFGGQTCLPVSELKQG-IRAVPLHDRKGERYKSVKLLMHFE 589 (591)
Q Consensus 542 D~d~~-----------~~dd~lGq~~ipL~sL~~G-yR~vpL~d~~g~~~~~asLlv~i~ 589 (591)
|+|.. ..|||+||..|.+..|... --|..|-....+..-.+-+-+||.
T Consensus 363 ded~dlksklrqkl~resddflgqtvievrtlsgemdvwynlekrtdksavsgairlhis 422 (1283)
T KOG1011|consen 363 DEDNDLKSKLRQKLTRESDDFLGQTVIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHIS 422 (1283)
T ss_pred cCcccHHHHHHHHhhhcccccccceeEEEEecccchhhhcchhhccchhhccceEEEEEE
Confidence 98853 3589999999999988533 246666555555544444555543
No 139
>cd00030 C2 C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions.
Probab=98.92 E-value=8.6e-09 Score=86.66 Aligned_cols=90 Identities=39% Similarity=0.570 Sum_probs=74.3
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|.|.|++|+++... ......+|||.+.+.+ ....+|+++.++.||.||+.|.|.+.......|.|.|++.
T Consensus 1 l~v~i~~~~~l~~~------~~~~~~~~~v~v~~~~----~~~~~T~~~~~~~~P~w~~~~~~~~~~~~~~~l~i~v~~~ 70 (102)
T cd00030 1 LRVTVIEARNLPAK------DLNGKSDPYVKVSLGG----KQKFKTKVVKNTLNPVWNETFEFPVLDPESDTLTVEVWDK 70 (102)
T ss_pred CEEEEEeeeCCCCc------CCCCCCCcEEEEEecc----CceEecceeCCCCCCcccceEEEEccCCCCCEEEEEEEec
Confidence 46889999988542 2235689999999875 3567899998889999999999998764556799999998
Q ss_pred cCCCCCCccEEEEEECCccC
Q 007734 544 DMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~ 563 (591)
+....+.++|++.+++..+.
T Consensus 71 ~~~~~~~~ig~~~~~l~~l~ 90 (102)
T cd00030 71 DRFSKDDFLGEVEIPLSELL 90 (102)
T ss_pred CCCCCCceeEEEEEeHHHhh
Confidence 87666889999999999987
No 140
>PLN02270 phospholipase D alpha
Probab=98.90 E-value=9.5e-09 Score=117.11 Aligned_cols=125 Identities=18% Similarity=0.275 Sum_probs=99.8
Q ss_pred ceeEEEEEEeccccCcC-C-----------CCCccCCCCCCCceEEEEEeccCCCceeeeccccCCC-CCCccCcEEEEe
Q 007734 461 KKTLKVTVYMGEGWYYD-F-----------PHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFP 527 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~-~-----------~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn-~NPvWNEtf~F~ 527 (591)
.++|.|+|+.|.+|+.. . ..+-....+.+||||.|.+.+ ....||+++.|. .||+|||+|...
T Consensus 7 hg~l~~~i~ea~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~tv~~~~----a~v~rtr~~~~~~~~p~w~e~f~i~ 82 (808)
T PLN02270 7 HGTLHATIYEVDKLHSGGGPGFLGKLVANVEETVGVGKGESQLYATIDLEK----ARVGRTRKIENEPKNPRWYESFHIY 82 (808)
T ss_pred ecceEEEEEEcccCCCcchhhHHHHHHhccchhccCCCCCCCceEEEEeCC----cEEEEEeecCCCCCCCccccceEEe
Confidence 35689999999988631 0 000001124579999999976 356799999886 699999999998
Q ss_pred eecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcc---eEEEccCCCCCccc-CeEEEEEEEEC
Q 007734 528 LSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYK-SVKLLMHFEFI 591 (591)
Q Consensus 528 v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~Gy---R~vpL~d~~g~~~~-~asLlv~i~f~ 591 (591)
+..+ .+-|.|+|+|.|..+ ..+||.+.||+..|-.|- +|+|+.+.+|+++. ++.|-|+++|+
T Consensus 83 ~ah~-~~~v~f~vkd~~~~g-~~~ig~~~~p~~~~~~g~~i~~~~~~~~~~~~p~~~~~~~~~~~~f~ 148 (808)
T PLN02270 83 CAHM-ASNIIFTVKDDNPIG-ATLIGRAYIPVEEILDGEEVDRWVEILDNDKNPIHGGSKIHVKLQYF 148 (808)
T ss_pred eccC-cceEEEEEecCCccC-ceEEEEEEEEHHHhcCCCccccEEeccCCCCCcCCCCCEEEEEEEEE
Confidence 8765 478999999999877 679999999999999884 79999999999984 47999999884
No 141
>cd08586 PI-PLCc_BcPLC_like Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins. This subfamily corresponds to the catalytic domain present in Bacillus cereus phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and its sequence homologs found in bacteria and eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Their catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This family also includes some uncharacterized eukaryotic homologs, which
Probab=98.88 E-value=5.2e-09 Score=108.09 Aligned_cols=137 Identities=15% Similarity=0.245 Sum_probs=109.4
Q ss_pred CCcccceeeeccCcccccCCC--CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhh
Q 007734 112 TAPVSHYFIYTGHNSYLTGNQ--LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKE 189 (591)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Q--l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI~~ 189 (591)
+.||++.-|--|||++-.... -.+.+....+..-|..|+|.++|+|+..+ +++..++||..... .+|.||++.|++
T Consensus 7 ~~~l~~lsipGTHdS~~~~~~~~~~~~~Q~~~i~~QL~~GiR~lDiR~~~~~-~~~l~~~Hg~~~~~-~~~~dvL~~i~~ 84 (279)
T cd08586 7 DTPLSELSIPGTHDSGALHGGLSSSVQCQDWSIAEQLNAGIRFLDIRLRLID-NNDLAIHHGPFYQG-LTFGDVLNECYS 84 (279)
T ss_pred CCEeeeeeecccchhccccCCCccceecCCCCHHHHHhcCCeEEEEEeeecC-CCeEEEEccCcccc-CcHHHHHHHHHH
Confidence 679999999999998764432 44566667789999999999999999864 24688999976555 899999999999
Q ss_pred hccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC---CCCCCCChhhccccEEEecC
Q 007734 190 YAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE---CLKEFPSPESLKRRIIISTK 253 (591)
Q Consensus 190 ~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~---~~~~lPSP~~Lk~KIlik~K 253 (591)
+--..-.-.|||+|..+++... -.+-+.++|.+.+..+... ....+|+..++||||++-.+
T Consensus 85 FL~~nP~E~Vil~l~~e~~~~~---~~~~f~~~~~~~~~~~~~~~~~~~~~~PtLge~RGKIVLl~r 148 (279)
T cd08586 85 FLDANPSETIIMSLKQEGSGDG---NTDSFAEIFKEYLDNYPSYFYYTESKIPTLGEVRGKIVLLRR 148 (279)
T ss_pred HHHhCCCcEEEEEEEecCCCCC---chHHHHHHHHHHHhcccccccccCCCCCchHHhcccEEEEEe
Confidence 8877777889999999998764 3445666677766665432 24789999999999999865
No 142
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.84 E-value=9.6e-09 Score=111.93 Aligned_cols=165 Identities=21% Similarity=0.264 Sum_probs=109.0
Q ss_pred CCCCCCCCCCccccccccee-eeec-cCCCCcceeee-eeeeeecCceeeeecCCcccCCCCCCCccC---CC-------
Q 007734 389 IRVDSSNYNPLIGWSHGAQM-VAFN-MQGHGRSLWLM-HGMFRANGGCGYVKKPNFLLQTGPHNEVFD---PK------- 455 (591)
Q Consensus 389 ~Ri~SSN~~P~~~W~~G~Qm-VALN-~QT~D~~m~lN-~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~---p~------- 455 (591)
||+.--..||. |+-.-.+ |+.+ .|+.-+-+.+. ..+|..|+--|.|.=|....+......... |.
T Consensus 206 T~v~r~tlnP~--fnEtf~f~v~~~~l~~~~L~l~V~~~drfsr~~~iGev~~~l~~~~~~~~~~~w~~l~~~~~~~~~~ 283 (421)
T KOG1028|consen 206 TRVHRKTLNPV--FNETFRFEVPYEELSNRVLHLSVYDFDRFSRHDFIGEVILPLGEVDLLSTTLFWKDLQPSSTDSEEL 283 (421)
T ss_pred eeeeecCcCCc--cccceEeecCHHHhccCEEEEEEEecCCcccccEEEEEEecCccccccccceeeeccccccCCcccc
Confidence 44555555553 3332222 2333 34444444444 367888888888877722222111000000 00
Q ss_pred C-C-------CCCceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEe
Q 007734 456 V-K-------LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP 527 (591)
Q Consensus 456 ~-~-------~p~~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~ 527 (591)
. + +|....|+|.|+.|++|.. .+..+..||||++.+........|+||.+.+++.||+|||+|.|.
T Consensus 284 ~gel~~sL~Y~p~~g~ltv~v~kar~L~~------~~~~~~~d~~Vk~~l~~~~~~~~kkkT~~~~~~~npv~nesf~F~ 357 (421)
T KOG1028|consen 284 AGELLLSLCYLPTAGRLTVVVIKARNLKS------MDVGGLSDPYVKVTLLDGDKRLSKKKTSVKKKTLNPVFNETFVFD 357 (421)
T ss_pred cceEEEEEEeecCCCeEEEEEEEecCCCc------ccCCCCCCccEEEEEecCCceeeeeeeecccCCCCCcccccEEEe
Confidence 0 1 2345679999999999953 345577899999998865444567789999999999999999998
Q ss_pred eecCCc--cEEEEEEEeccCCCCCCccEEEEEECCc
Q 007734 528 LSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSE 561 (591)
Q Consensus 528 v~~pel--a~Lrf~V~D~d~~~~dd~lGq~~ipL~s 561 (591)
|....+ +.|.++|||+|..+++++||++.+...+
T Consensus 358 vp~~~l~~~~l~l~V~d~d~~~~~~~iG~~~lG~~~ 393 (421)
T KOG1028|consen 358 VPPEQLAEVSLELTVWDHDTLGSNDLIGRCILGSDS 393 (421)
T ss_pred CCHHHhheeEEEEEEEEcccccccceeeEEEecCCC
Confidence 875444 5699999999999999999998887766
No 143
>cd08588 PI-PLCc_At5g67130_like Catalytic domain of Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. This subfamily corresponds to the catalytic domain present in Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. Members in this family show high sequence similarity to bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participates in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG).
Probab=98.83 E-value=1.3e-08 Score=104.50 Aligned_cols=139 Identities=18% Similarity=0.267 Sum_probs=104.9
Q ss_pred CCCCcccceeeeccCcccccCCCC--CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccc-cchHHHHHHH
Q 007734 110 DMTAPVSHYFIYTGHNSYLTGNQL--NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA-PVELIKCLRS 186 (591)
Q Consensus 110 dM~~PLs~YfI~SSHNTYL~g~Ql--~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts-~i~f~dvi~a 186 (591)
--++||++|.+-.+||+|..+..- .+...-......|..|.|-++||++... ++..++||..... ..+|.|+++.
T Consensus 7 ~~~~~~~~it~~gtHNS~~~~~~~~~~~~nQ~~si~~QL~~GiR~l~ld~~~~~--~~~~lcH~~~~~~~~~~~~d~L~~ 84 (270)
T cd08588 7 LCDRTYDEYTFLTTHNSFANSEDAFFLAPNQEDDITKQLDDGVRGLMLDIHDAN--GGLRLCHSVCGLGDGGPLSDVLRE 84 (270)
T ss_pred cCCcccccceeEEeccCccccCCCcccccccCCCHHHHHHhCcceEeeeEEecC--CCEEEECCCccccCCccHHHHHHH
Confidence 357899999999999999988653 3344444578889999999999998753 4578999865443 7899999999
Q ss_pred HhhhccccCCCceEEeeccCCCHHHHHHHHHHHH-HHhhccccCCCCCC--CCCCCChhhcc--ccEEEe
Q 007734 187 IKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVT-QTLGEILFTPGSEC--LKEFPSPESLK--RRIIIS 251 (591)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~-~~~Gd~L~~~~~~~--~~~lPSP~~Lk--~KIlik 251 (591)
|+++.=..-.=-|||.||++.+.... ..+.+++ ..||+.+|.|+... ...+|++++|. ||-||-
T Consensus 85 i~~fL~~nP~EvV~l~l~~~~~~~~~-~~~~~~~~~gl~~~~y~p~~~~~~~~~WPTL~emi~~gkRlvv 153 (270)
T cd08588 85 VVDFLDANPNEVVTLFLEDYVSPGPL-LRSKLFRVAGLTDLVYVPDAMPWAGSDWPTLGEMIDANKRLLV 153 (270)
T ss_pred HHHHHHhCCCcEEEEEEEeCCCcchH-HHHHHhhhcCccceEEcCCCCcCCCCCCCCHHHHHhcCCEEEE
Confidence 99986433333389999999987664 3344443 68999999886443 36899999998 554443
No 144
>COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
Probab=98.80 E-value=1.3e-08 Score=117.87 Aligned_cols=104 Identities=26% Similarity=0.402 Sum_probs=89.6
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
+.|+|.+++|++|+. .+..+-+||||++.+.+ +..+||++++.|+||+|||.|..+|.+.....+.+.|+
T Consensus 1040 G~l~I~~~~~~nl~~------~d~ng~sDpfv~~~ln~----k~vyktkv~KktlNPvwNEe~~i~v~~r~~D~~~i~v~ 1109 (1227)
T COG5038 1040 GYLTIMLRSGENLPS------SDENGYSDPFVKLFLNE----KSVYKTKVVKKTLNPVWNEEFTIEVLNRVKDVLTINVN 1109 (1227)
T ss_pred CcEEEEEeccCCCcc------cccCCCCCceEEEEecc----eecccccchhccCCCCccccceEeeeccccceEEEEEe
Confidence 558999999999964 45667789999999876 34789999999999999999999998877788999999
Q ss_pred eccCCCCCCccEEEEEECCccCCcce---EEEccCCC
Q 007734 542 EYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHDRK 575 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~~GyR---~vpL~d~~ 575 (591)
|||...+++.||++.++|..|.+|.. .|||-.+.
T Consensus 1110 Dwd~~~knd~lg~~~idL~~l~~~~~~n~~i~ldgk~ 1146 (1227)
T COG5038 1110 DWDSGEKNDLLGTAEIDLSKLEPGGTTNSNIPLDGKT 1146 (1227)
T ss_pred ecccCCCccccccccccHhhcCcCCccceeeeccCcc
Confidence 99999999999999999999998853 47775443
No 145
>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=98.46 E-value=6.7e-08 Score=106.62 Aligned_cols=95 Identities=24% Similarity=0.379 Sum_probs=77.3
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCC--CceeeeccccCCCCCCccCcEEEEeeec----CCccE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--DTVMKKTKTLEDNWIPSWNEEFEFPLSV----PELAL 535 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~--d~~k~kTkvi~nn~NPvWNEtf~F~v~~----pela~ 535 (591)
++|.|.|+.|.++.. .|.+|-+||||.|++..--. -....||+|+..++||+|+|+|+|.|.. .+.|+
T Consensus 947 q~L~veVlhA~diip------LD~NGlSDPFVviEl~P~~~fp~v~~q~T~V~~rtLnPVfDE~FeFsVp~e~c~te~Am 1020 (1103)
T KOG1328|consen 947 QTLVVEVLHAKDIIP------LDSNGLSDPFVVIELIPKFRFPAVPVQKTKVVSRTLNPVFDETFEFSVPPEPCSTETAM 1020 (1103)
T ss_pred cchhhhhhccccccc------cCCCCCCCCeEEEEeccccccccchhhhhhhhhccccchhhhheeeecCccccccccce
Confidence 457888888887742 36678899999999864211 1234689999999999999999999863 24689
Q ss_pred EEEEEEeccCCCCCCccEEEEEECCcc
Q 007734 536 LRIEVHEYDMSEKDDFGGQTCLPVSEL 562 (591)
Q Consensus 536 Lrf~V~D~d~~~~dd~lGq~~ipL~sL 562 (591)
|.|+|.|+|..+.+||.|++.+.|..+
T Consensus 1021 ~~FTVMDHD~L~sNDFaGEA~L~Lg~v 1047 (1103)
T KOG1328|consen 1021 LHFTVMDHDYLRSNDFAGEAFLELGDV 1047 (1103)
T ss_pred EEEEeeccceecccccchHHHHhhCCC
Confidence 999999999999999999999988877
No 146
>PLN02352 phospholipase D epsilon
Probab=98.38 E-value=2e-06 Score=98.19 Aligned_cols=118 Identities=18% Similarity=0.256 Sum_probs=88.9
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V 540 (591)
.++|.++|..|.-+...+.. ........||||.|.+.+ ....|| .|.-||+|||+|...+..+-.+-|.|+|
T Consensus 9 hg~l~~~i~~~~~~~~~~~~-~~~~~~~~~~y~tv~~~~----~~v~rt---~~~~~p~w~e~f~i~~ah~~~~~~~f~v 80 (758)
T PLN02352 9 HGTLEATIFDATPYTPPFPF-NCIFLNGKATYVTIKIGN----KKVAKT---SHEYDRVWNQTFQILCAHPLDSTITITL 80 (758)
T ss_pred ccceEEEEEEeeehhhcccc-cccccCCCCceEEEEeCC----cEEecC---CCCCCCccccceeEEeeeecCCcEEEEE
Confidence 46799999998733211110 000111239999999976 344577 4556999999999998766446799999
Q ss_pred EeccCCCCCCccEEEEEECCccCCcc----eEEEccCCCCCcccCeEEEEEEEEC
Q 007734 541 HEYDMSEKDDFGGQTCLPVSELKQGI----RAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 541 ~D~d~~~~dd~lGq~~ipL~sL~~Gy----R~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
+|. ..+||.+.+|+..|-.|- +|+|+.+.+|+++.++.|-|+++|+
T Consensus 81 k~~-----~~~ig~~~~p~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 130 (758)
T PLN02352 81 KTK-----CSILGRFHIQAHQIVTEASFINGFFPLIMENGKPNPELKLRFMLWFR 130 (758)
T ss_pred ecC-----CeEEEEEEEEHHHhhCCCcccceEEEcccCCCCCCCCCEEEEEEEEE
Confidence 982 679999999999998883 6999999999999889999999884
No 147
>COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
Probab=98.07 E-value=9.6e-06 Score=94.68 Aligned_cols=93 Identities=23% Similarity=0.317 Sum_probs=73.6
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
+.|.|+|.+|.++.. ...-..+.+|||+.+...+ ....||++++|++||+|||+|...+..- -.-|.+.||
T Consensus 436 GVv~vkI~sa~~lk~----~d~~i~~~vDpyit~~~~~----r~~gkT~v~~nt~nPvwNEt~Yi~lns~-~d~L~Lsly 506 (1227)
T COG5038 436 GVVEVKIKSAEGLKK----SDSTINGTVDPYITVTFSD----RVIGKTRVKKNTLNPVWNETFYILLNSF-TDPLNLSLY 506 (1227)
T ss_pred EEEEEEEeeccCccc----ccccccCCCCceEEEEecc----ccCCccceeeccCCccccceEEEEeccc-CCceeEEEE
Confidence 578999999998842 2122457789999999764 3455999999999999999998776521 134899999
Q ss_pred eccCCCCCCccEEEEEECCccC
Q 007734 542 EYDMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~ 563 (591)
|.+...+|+++|...++|..|.
T Consensus 507 D~n~~~sd~vvG~~~l~L~~L~ 528 (1227)
T COG5038 507 DFNSFKSDKVVGSTQLDLALLH 528 (1227)
T ss_pred eccccCCcceeeeEEechHHhh
Confidence 9777788999999999998875
No 148
>cd08689 C2_fungal_Pkc1p C2 domain found in protein kinase C (Pkc1p) in Saccharomyces cerevisiae. This family is named after the protein kinase C in Saccharomyces cerevisiae, Pkc1p. Protein kinase C is a member of a family of Ser/Thr phosphotransferases that are involved in many cellular signaling pathways. PKC has two antiparallel coiled-coiled regions (ACC finger domain) (AKA PKC homology region 1 (HR1)/ Rho binding domain) upstream of the C2 domain and two C1 domains downstream. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains, like those of PKC, are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that
Probab=98.06 E-value=1.1e-05 Score=70.58 Aligned_cols=87 Identities=18% Similarity=0.208 Sum_probs=62.6
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEec
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 543 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 543 (591)
|+|+|.+++++... ......+.+||||.|.+.+ ..+.||++. -||.|||+|.|+|. ...-+.+.|||.
T Consensus 1 L~I~V~~~RdvdH~---~~~~~~~~~etyV~IKved----~~kaRTr~s---rnd~WnE~F~i~Vd--k~nEiel~VyDk 68 (109)
T cd08689 1 LTITITSARDVDHI---ASPRFSKRPETYVSIKVED----VERARTKPS---RNDRWNEDFEIPVE--KNNEEEVIVYDK 68 (109)
T ss_pred CEEEEEEEecCccc---cchhhccCCCcEEEEEECC----EEEEeccCC---CCCcccceEEEEec--CCcEEEEEEEeC
Confidence 57889999887321 1111356789999999875 457888874 79999999999994 345799999997
Q ss_pred cCCCCCCccEEEEEECCccC
Q 007734 544 DMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 544 d~~~~dd~lGq~~ipL~sL~ 563 (591)
.. ...-.+|..-++++.|.
T Consensus 69 ~~-~~~~Pi~llW~~~sdi~ 87 (109)
T cd08689 69 GG-DQPVPVGLLWLRLSDIA 87 (109)
T ss_pred CC-CeecceeeehhhHHHHH
Confidence 53 22446777777777663
No 149
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]
Probab=97.91 E-value=3.8e-05 Score=85.54 Aligned_cols=113 Identities=24% Similarity=0.333 Sum_probs=86.1
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 541 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 541 (591)
..|.|+|..|++||. .+..+..|||+.|.+.. +...||.+|..++-|.|.|+|.|.+.. ....|.|-||
T Consensus 5 ~sl~vki~E~knL~~------~~~~g~~D~yC~v~lD~----E~v~RT~tv~ksL~PF~gEe~~~~iP~-~F~~l~fYv~ 73 (800)
T KOG2059|consen 5 QSLKVKIGEAKNLPS------YGPSGMRDCYCTVNLDQ----EEVCRTATVEKSLCPFFGEEFYFEIPR-TFRYLSFYVW 73 (800)
T ss_pred cceeEEEeecccCCC------CCCCCCcCcceEEeecc----hhhhhhhhhhhhcCCccccceEEecCc-ceeeEEEEEe
Confidence 458999999999974 24556789999998854 456799999999999999999998743 3556889999
Q ss_pred eccCCCCCCccEEEEEECCccC--Ccc-eEEEc--cCCCCCcccCeEEEE
Q 007734 542 EYDMSEKDDFGGQTCLPVSELK--QGI-RAVPL--HDRKGERYKSVKLLM 586 (591)
Q Consensus 542 D~d~~~~dd~lGq~~ipL~sL~--~Gy-R~vpL--~d~~g~~~~~asLlv 586 (591)
|.| .++|+.||.++|.-..|. +|. .|..| .|++-+.-+..-|.|
T Consensus 74 D~d-~~~D~~IGKvai~re~l~~~~~~d~W~~L~~VD~dsEVQG~v~l~l 122 (800)
T KOG2059|consen 74 DRD-LKRDDIIGKVAIKREDLHMYPGKDTWFSLQPVDPDSEVQGKVHLEL 122 (800)
T ss_pred ccc-cccccccceeeeeHHHHhhCCCCccceeccccCCChhhceeEEEEE
Confidence 999 788999999999877763 454 34555 466666544434433
No 150
>KOG1031 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only]
Probab=97.70 E-value=0.00014 Score=79.24 Aligned_cols=120 Identities=18% Similarity=0.271 Sum_probs=91.7
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccC-cEEEEeeecCCcc--EEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWN-EEFEFPLSVPELA--LLRI 538 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWN-Etf~F~v~~pela--~Lrf 538 (591)
.+|.|+|..|++||.-. ......|.||+|.+.. ..+||.+...++||.|| +-|.|.|...++. -|.+
T Consensus 3 gkl~vki~a~r~lpvmd-----kasd~tdafveik~~n-----~t~ktdvf~kslnp~wnsdwfkfevddadlqdeplqi 72 (1169)
T KOG1031|consen 3 GKLGVKIKAARHLPVMD-----KASDLTDAFVEIKFAN-----TTFKTDVFLKSLNPQWNSDWFKFEVDDADLQDEPLQI 72 (1169)
T ss_pred CcceeEEEeccCCcccc-----cccccchheeEEEecc-----cceehhhhhhhcCCcccccceEEecChhhhccCCeeE
Confidence 45889999999997411 1123468899999874 57899999999999999 4599999877663 5899
Q ss_pred EEEeccCCCCCCccEEEEEECCccC----------Cc---ceEEEccCCCCCcccCeEEEEEEEEC
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELK----------QG---IRAVPLHDRKGERYKSVKLLMHFEFI 591 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~----------~G---yR~vpL~d~~g~~~~~asLlv~i~f~ 591 (591)
++.|+|.-+.+|-||.+.|.++-|. .| --|+|++|.-...-+...+.|+++++
T Consensus 73 ~lld~dtysandaigkv~i~idpl~~e~aaqavhgkgtvisgw~pifdtihgirgeinvivkvdlf 138 (1169)
T KOG1031|consen 73 RLLDHDTYSANDAIGKVNIDIDPLCLEEAAQAVHGKGTVISGWFPIFDTIHGIRGEINVIVKVDLF 138 (1169)
T ss_pred EEecccccccccccceeeeccChHHHHhHHhhhcCCceEEeeeeecceecccccceeEEEEEEeeh
Confidence 9999998888999999999988763 23 25889998544444445777887764
No 151
>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.67 E-value=0.00015 Score=79.76 Aligned_cols=104 Identities=28% Similarity=0.391 Sum_probs=81.4
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCC-C-ceeeeccccCCCCCCccCcEEEEeeec---CCccEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA-D-TVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALL 536 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~-d-~~k~kTkvi~nn~NPvWNEtf~F~v~~---pela~L 536 (591)
.+++|+|+.|.+|.. ...+.-.|||+|.+.|... | ..++.|++..||..|.+||+|+|.+.. |+.--|
T Consensus 1125 hkvtvkvvaandlkw-------qtsgmFrPFVEV~ivGP~lsDKKRK~~TKtKsnnWaPKyNEtF~f~Lg~e~~Pe~YEL 1197 (1283)
T KOG1011|consen 1125 HKVTVKVVAANDLKW-------QTSGMFRPFVEVHIVGPHLSDKKRKFSTKTKSNNWAPKYNETFHFFLGNEGGPEHYEL 1197 (1283)
T ss_pred ceEEEEEEecccccc-------hhccccccceEEEEecCcccchhhhccccccCCCcCcccCceeEEEeccCCCCceEEE
Confidence 568899999988854 2234456899999998532 3 345678999999999999999998764 555579
Q ss_pred EEEEEeccCCCCCCccEEEEEECCccC-Ccc--eEEEcc
Q 007734 537 RIEVHEYDMSEKDDFGGQTCLPVSELK-QGI--RAVPLH 572 (591)
Q Consensus 537 rf~V~D~d~~~~dd~lGq~~ipL~sL~-~Gy--R~vpL~ 572 (591)
.|.|+|+.....|..+|-++++|.++. .|- -|+||-
T Consensus 1198 ~~~VKDYCFAReDRvvGl~VlqL~~va~kGS~a~W~pLg 1236 (1283)
T KOG1011|consen 1198 QFCVKDYCFAREDRVVGLAVLQLRSVADKGSCACWVPLG 1236 (1283)
T ss_pred EEeehhheeecccceeeeeeeehhhHhhcCceeEeeecc
Confidence 999999987776789999999999984 453 588884
No 152
>KOG0905 consensus Phosphoinositide 3-kinase [Signal transduction mechanisms]
Probab=97.61 E-value=4.9e-05 Score=88.38 Aligned_cols=96 Identities=22% Similarity=0.256 Sum_probs=78.1
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEee-ecCCc--cEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPEL--ALLRI 538 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v-~~pel--a~Lrf 538 (591)
.+|+|-|--+++|+.- .....+||||+.++...|....|+||++++++.||.|||.+.+.- ....+ ..|.+
T Consensus 1524 ~~LtImV~H~K~L~~L------qdg~~P~pyVK~YLlPdp~k~sKRKTKvvrkt~~PTfnE~LvY~g~p~~~l~qReLQ~ 1597 (1639)
T KOG0905|consen 1524 GTLTIMVMHAKGLALL------QDGQDPDPYVKTYLLPDPRKTSKRKTKVVRKTRNPTFNEMLVYDGFPKEILQQRELQV 1597 (1639)
T ss_pred ceEEEEhhhhcccccc------cCCCCCCcceeEEecCCchHhhhhhhccccccCCCchhhheeecCCchhhhhhheeee
Confidence 5678888888888531 223458999999999988888899999999999999999999872 22222 46899
Q ss_pred EEEeccCCCCCCccEEEEEECCccC
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~ 563 (591)
.||..+....+.|+|..+|||..+.
T Consensus 1598 sVls~~~~~en~~lg~v~i~L~~~~ 1622 (1639)
T KOG0905|consen 1598 SVLSNGGLLENVFLGGVNIPLLKVD 1622 (1639)
T ss_pred eeecccceeeeeeeeeeecchhhcc
Confidence 9999887777899999999998864
No 153
>cd08622 PI-PLCXDc_CG14945_like Catalytic domain of Drosophila melanogaster CG14945-like proteins similar to phosphatidylinositol-specific phospholipase C, X domain containing. This subfamily corresponds to the catalytic domain present in uncharacterized metazoan Drosophila melanogaster CG14945-like proteins, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI
Probab=97.60 E-value=0.00048 Score=71.27 Aligned_cols=135 Identities=20% Similarity=0.306 Sum_probs=95.4
Q ss_pred CCcccceeeeccCcccccCCCCC---------CCCChHHHHHHHhCCCcEEEEEeecCC-CCCCceEeeCCcccccchHH
Q 007734 112 TAPVSHYFIYTGHNSYLTGNQLN---------SDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELI 181 (591)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~---------g~Ss~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv~HG~tlts~i~f~ 181 (591)
+.||++=+|--|||+.-.+-... +..--.....-|..|.|-+.|.|.-.+ ++++-.++||-.. -.+|.
T Consensus 6 ~~~l~~l~iPGtHdS~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiRylDlRv~~~~~~~~~~~~~Hg~~~--~~~l~ 83 (276)
T cd08622 6 NLRIKDLFIPGTHNSAAYDTNSNANESLVDKYLLTQDLDIWTQLVHGIRYLDLRVGYYPDSPDNFWINHDLVR--IVPLL 83 (276)
T ss_pred CceeeeeeccccchhhhcCCCCcccchhhhhhhcccCCcHHHHHhhCCeEEEEEeeccCCCCCcEEEECcccc--cccHH
Confidence 45999999999999875443221 122223356778899999999996432 2245678887543 28999
Q ss_pred HHHHHHhhhccccCCCceEEeeccCCC------HHHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhc--cccEEEe
Q 007734 182 KCLRSIKEYAFVASEYPVVITLEDHLT------PDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESL--KRRIIIS 251 (591)
Q Consensus 182 dvi~aI~~~AF~~S~yPvILSlE~Hcs------~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~L--k~KIlik 251 (591)
+|++.|+++.=.. .=-|||.+ .|.. ++.-..+.+++.+.||+.|+.|.. .....|+.++| +||.+|-
T Consensus 84 ~vL~~v~~Fl~~~-~EvVil~~-~~f~~~~~~~~~~h~~l~~~l~~~~g~~l~~~~~-~~~~~~TL~~l~~~gkrViv 158 (276)
T cd08622 84 TVLNDVRNFVQNT-GEIVVLDF-HRFPVGFHSHPEVHDELISLLRQELGDLILRRSR-NYGWGPTLSEIWARRKRVII 158 (276)
T ss_pred HHHHHHHHHHHHC-CCEEEEEE-EccCcCCCCCHHHHHHHHHHHHHHhccceecCcc-cccccCcHHHHHhcCCEEEE
Confidence 9999999986444 56688877 4443 577788999999999999998753 23456899996 5555544
No 154
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]
Probab=97.57 E-value=0.00018 Score=80.35 Aligned_cols=76 Identities=26% Similarity=0.417 Sum_probs=63.1
Q ss_pred CCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecC---------------CccEEEEEEEe-ccCCCCCC
Q 007734 487 SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP---------------ELALLRIEVHE-YDMSEKDD 550 (591)
Q Consensus 487 ~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~p---------------ela~Lrf~V~D-~d~~~~dd 550 (591)
+.+|||++|...|.-... .++|++++.+-||.|||.|.|.+..+ ++.-|++.+|+ .+....++
T Consensus 149 ~~~dp~~~v~~~g~~~~~-~~~T~~~kkt~~p~~~Ev~~f~~~~~~~~s~ks~~~~~~e~~~l~irv~lW~~~~~~~~~~ 227 (800)
T KOG2059|consen 149 GQCDPFARVTLCGPSKLK-EKKTKVKKKTTNPQFDEVFYFEVTREESYSKKSLFMPEEEDDMLEIRVDLWNDLNLVINDV 227 (800)
T ss_pred CCCCcceEEeecccchhh-ccccceeeeccCcchhhheeeeeccccccccchhcCcccCCceeeEEEeeccchhhhhhhh
Confidence 458999999988743322 37899999999999999999998866 56678999998 56666689
Q ss_pred ccEEEEEECCccC
Q 007734 551 FGGQTCLPVSELK 563 (591)
Q Consensus 551 ~lGq~~ipL~sL~ 563 (591)
|+|+..+|+..++
T Consensus 228 FlGevrv~v~~~~ 240 (800)
T KOG2059|consen 228 FLGEVRVPVDVLR 240 (800)
T ss_pred hceeEEeehhhhh
Confidence 9999999999987
No 155
>KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.55 E-value=0.00013 Score=75.28 Aligned_cols=104 Identities=24% Similarity=0.321 Sum_probs=77.1
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCcc--EEEEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEV 540 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela--~Lrf~V 540 (591)
.|.|+++.+..+ ..+|..+-+||||++.+...-....++||.+.+++.||+||+.|.|.+..-+++ .+.+.|
T Consensus 234 ~l~vt~iRc~~l------~ssDsng~sDpyvS~~l~pdv~~~fkkKt~~~K~t~~p~fd~~~~~~i~pgdLa~~kv~lsv 307 (362)
T KOG1013|consen 234 GLIVTIIRCSHL------ASSDSNGYSDPYVSQRLSPDVGKKFKKKTQQKKKTLNPEFDEEFFYDIGPGDLAYKKVALSV 307 (362)
T ss_pred ceEEEEEEeeee------eccccCCCCCccceeecCCCcchhhcccCcchhccCCccccccccccCCccchhcceEEEee
Confidence 477888876555 235777889999998887333334567899999999999999999999887876 578899
Q ss_pred EeccCCCCCCccEEEEEECCccCCcceEEEccCCCCCc
Q 007734 541 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGER 578 (591)
Q Consensus 541 ~D~d~~~~dd~lGq~~ipL~sL~~GyR~vpL~d~~g~~ 578 (591)
||++.....+++|-... -+||--++++..|.+
T Consensus 308 gd~~~G~s~d~~GG~~~------g~~rr~~v~~h~gr~ 339 (362)
T KOG1013|consen 308 GDYDIGKSNDSIGGSML------GGYRRGEVHKHWGRC 339 (362)
T ss_pred cccCCCcCccCCCcccc------cccccchhhcCcccc
Confidence 99997766888875332 345555666666554
No 156
>cd08587 PI-PLCXDc_like Catalytic domain of phosphatidylinositol-specific phospholipase C X domain containing and similar proteins. This family corresponds to the catalytic domain present in phosphatidylinositol-specific phospholipase C X domain containing proteins (PI-PLCXD) which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs mainly found in eukaryota. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs and their bacterial homologs contain a single TIM-barrel type catalytic domain, X domain, which is more closely related to that of bacterial PI-PLCs. Although the biological function of eukaryotic PI-PLCXDs still remains unclear, it may be
Probab=97.51 E-value=0.00078 Score=70.11 Aligned_cols=136 Identities=15% Similarity=0.209 Sum_probs=95.0
Q ss_pred CCcccceeeeccCcccccCCCCCC---------------------CCChHHHHHHHhCCCcEEEEEeecCC-CCCCceEe
Q 007734 112 TAPVSHYFIYTGHNSYLTGNQLNS---------------------DCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVL 169 (591)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~g---------------------~Ss~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv~ 169 (591)
+.||.+..|--|||+.--+-.-.+ ..--.....=|..|+|-++|++.-.+ .++.-.++
T Consensus 6 ~~~l~~l~iPGtHds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiR~fDlR~~~~~~~~~~~~~~ 85 (288)
T cd08587 6 DLPLRDLVIPGSHDSGMYTINGDSPVGPDQPEFGKIAKGIVRKWSVTQSLSIYDQLEAGIRYFDLRVAYKPDSENKLYFV 85 (288)
T ss_pred hCchhheecccccccceeEcCCCCCCCCcchhhhhhHHHHHHHHhhccCcCHHHHHhhCceEEEEEEeecCCCCCeEEEE
Confidence 479999999999998654322221 11112245667889999999995432 12456788
Q ss_pred eCCcccccchHHHHHHHHhhhccccCCCceEEeeccC-----CCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhc
Q 007734 170 HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDH-----LTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESL 244 (591)
Q Consensus 170 HG~tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~H-----cs~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~L 244 (591)
||..- -.+|.+|++.|+++.=....=-|||.++.. ++.++-..+.+.|.++||+.++.+. ....-|+.++|
T Consensus 86 H~~~~--~~~~~~~l~~i~~fl~~~p~Evvil~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~tL~~l 161 (288)
T cd08587 86 HGLYS--GEPVDEVLEDVNDFLDEHPKEVVILDFNHFYGMDDKSPEDHEKLVELLEDIFGDKLCPRD--SDLLDVTLADL 161 (288)
T ss_pred eeccc--ccCHHHHHHHHHHHHHhCCCcEEEEEEEccccCCcccHHHHHHHHHHHHHHhccccCCCc--cccCCCcHHHH
Confidence 88422 288999999999975544455688888643 3457788888999999999999762 23466789999
Q ss_pred c--ccEEEe
Q 007734 245 K--RRIIIS 251 (591)
Q Consensus 245 k--~KIlik 251 (591)
. ||-+|-
T Consensus 162 ~~~gk~viv 170 (288)
T cd08587 162 WESGKRVIV 170 (288)
T ss_pred HhCCCeEEE
Confidence 8 774443
No 157
>cd08683 C2_C2cd3 C2 domain found in C2 calcium-dependent domain containing 3 (C2cd3) proteins. C2cd3 is a novel C2 domain-containing protein specific to vertebrates. C2cd3 functions in regulator of cilia formation, Hedgehog signaling, and mouse embryonic development. Mutations in C2cd3 mice resulted in lethality in some cases and exencephaly, a twisted body axis, and pericardial edema in others. The presence of calcium-dependent lipid-binding domains in C2cd3 suggests a potential role in vesicular transport. C2cd3 is also an interesting candidate for ciliopathy because of its orthology to certain cilia-related genetic disease loci on chromosome. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances inc
Probab=97.11 E-value=0.0012 Score=59.79 Aligned_cols=81 Identities=25% Similarity=0.463 Sum_probs=59.2
Q ss_pred CCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeec---------------CCccEEEEEEEeccCCC------
Q 007734 489 PDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV---------------PELALLRIEVHEYDMSE------ 547 (591)
Q Consensus 489 ~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~---------------pela~Lrf~V~D~d~~~------ 547 (591)
.++||++.+.-+|.+ ..++|+++.++|-|.|+.+++|.+.. -+.+-+.|.||.....+
T Consensus 33 VN~yv~i~lSFl~~~-e~r~TrtVArSFcPeF~Hh~Efpc~lv~~~~~Ge~~sLAElLe~~eiil~vwHr~~~s~~~~~~ 111 (143)
T cd08683 33 VNSYVTIHLSFLPEK-ELRRTRTVARSFCPEFNHHVEFPCNLVVQRNSGEAISLAELLESAEIILEVWHRNPKSAGDTIK 111 (143)
T ss_pred cceEEEEEeccCCCC-ceeeccchhhhcCCCccceEEEecccEEEcCCCccccHHHHhhcceEEeeeeecCCccccceec
Confidence 578999998877654 45689999999999999999997541 12256899999866432
Q ss_pred ----CCCccEEEEEECCcc---CCcc-eEEE
Q 007734 548 ----KDDFGGQTCLPVSEL---KQGI-RAVP 570 (591)
Q Consensus 548 ----~dd~lGq~~ipL~sL---~~Gy-R~vp 570 (591)
+|-.||.+.||+..| +.|. .|.|
T Consensus 112 ~~~~~DilLG~v~IPl~~Ll~~rsGitGW~p 142 (143)
T cd08683 112 IETSGDILLGTVKIPLRDLLTKRSGITGWYP 142 (143)
T ss_pred cCcCCcEEEEEEEeeHHHHhhcccCcccccc
Confidence 233688889998876 4554 3444
No 158
>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=97.08 E-value=0.00019 Score=80.06 Aligned_cols=81 Identities=20% Similarity=0.416 Sum_probs=58.7
Q ss_pred eccccCCCCCCccCcEEEEeeecCCccEEEEEEEeccCC---------------------------------C---CCCc
Q 007734 508 KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMS---------------------------------E---KDDF 551 (591)
Q Consensus 508 kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~---------------------------------~---~dd~ 551 (591)
-|.+.+.++||.|+|.|.|+|..-.--.+.+.+||+|.- + .|||
T Consensus 180 atsvk~~TLnPkW~EkF~F~IeDv~tDqfHlDIWDHDDe~sv~dAvs~LNeV~G~kG~GRyFKqv~qSARans~d~tDDF 259 (1103)
T KOG1328|consen 180 ATSVKKKTLNPKWSEKFQFTIEDVQTDQFHLDIWDHDDEESVLDAVSSLNEVTGFKGIGRYFKQVTQSARANSDDCTDDF 259 (1103)
T ss_pred hcccccccCCcchhhheeeehhccccceeeeecccCCccHHHHHHHHHHhhhhcchhHHHHHHHHHHHHhcCCCcccccc
Confidence 466777889999999999999865556788999998743 1 3899
Q ss_pred cEEEEEECCccCC-cc-eEEEccCCCCCcccCeEEEEEE
Q 007734 552 GGQTCLPVSELKQ-GI-RAVPLHDRKGERYKSVKLLMHF 588 (591)
Q Consensus 552 lGq~~ipL~sL~~-Gy-R~vpL~d~~g~~~~~asLlv~i 588 (591)
+|...|||..+.+ |. +|..|--.+.+.--.+.+-+++
T Consensus 260 LGciNipl~EiP~~Gld~WFkLepRS~~S~VqG~~~Lkl 298 (1103)
T KOG1328|consen 260 LGCINIPLAEIPPDGLDQWFKLEPRSDKSKVQGQVKLKL 298 (1103)
T ss_pred ccccccchhcCCcchHHHHhccCcccccccccceEEEEE
Confidence 9999999999975 53 6666655444443333444443
No 159
>KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis]
Probab=97.00 E-value=0.00052 Score=79.29 Aligned_cols=94 Identities=19% Similarity=0.255 Sum_probs=75.9
Q ss_pred CCceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEE
Q 007734 459 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRI 538 (591)
Q Consensus 459 p~~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf 538 (591)
|+...++|-|..|.+|.. .|..+..||||.|.+.+. ...-++..+.+++||+|++-|++....|-...+.+
T Consensus 610 pi~~LvrVyvv~A~~L~p------~D~ng~adpYv~l~lGk~---~~~d~~~yip~tlnPVfgkmfel~~~lp~ek~l~v 680 (1105)
T KOG1326|consen 610 PIKCLVRVYVVEAFSLQP------SDGNGDADPYVKLLLGKK---RTLDRAHYIPNTLNPVFGKMFELECLLPFEKDLIV 680 (1105)
T ss_pred cceeeEEEEEEEeeeccc------cCCCCCcCceeeeeeccc---hhhhhhhcCcCCCCcHHHHHHHhhcccchhhccee
Confidence 455566778888888743 366678999999998651 12246777889999999999999988887778999
Q ss_pred EEEeccCCCCCCccEEEEEECCc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSE 561 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~s 561 (591)
.|||+|..+.++.+|+.++.|..
T Consensus 681 ~vyd~D~~~~d~~iget~iDLEn 703 (1105)
T KOG1326|consen 681 EVYDHDLEAQDEKIGETTIDLEN 703 (1105)
T ss_pred EEEEeecccccchhhceehhhhh
Confidence 99999999889999999998765
No 160
>cd08398 C2_PI3K_class_I_alpha C2 domain present in class I alpha phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, alpha isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a c
Probab=96.92 E-value=0.013 Score=55.57 Aligned_cols=101 Identities=17% Similarity=0.183 Sum_probs=67.5
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCc-eeeeccccCCCCCCccCcEEEEeeecCC---ccEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLR 537 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~-~k~kTkvi~nn~NPvWNEtf~F~v~~pe---la~Lr 537 (591)
..++|+|+++.++... ...|.||++.+......- ....|+.+.. -++.|||-++|++...+ .|.|.
T Consensus 8 ~~~~v~i~~~~~~~~~---------~~~~l~V~v~l~~g~~~L~~pv~T~~v~~-~~~~WnEwL~fpI~i~dLPr~ArL~ 77 (158)
T cd08398 8 SNLRIKILCATYVNVN---------DIDKIYVRTGIYHGGEPLCDNVNTQRVPC-SNPRWNEWLDYDIYIPDLPRSARLC 77 (158)
T ss_pred CCeEEEEEeeccCCCC---------CcCeEEEEEEEEECCEEccCeeEecccCC-CCCccceeEEcccchhcCChhheEE
Confidence 3489999999887541 124779999887421111 1123443332 46899999999887544 48999
Q ss_pred EEEEeccCCC----CCCccEEEEEECC----ccCCcceEEEcc
Q 007734 538 IEVHEYDMSE----KDDFGGQTCLPVS----ELKQGIRAVPLH 572 (591)
Q Consensus 538 f~V~D~d~~~----~dd~lGq~~ipL~----sL~~GyR~vpL~ 572 (591)
|+||+..... ....+|.+.++|= .|++|...+.|.
T Consensus 78 iti~~~~~~~~~k~~~~~iG~~ni~LFd~~~~Lr~G~~~L~lW 120 (158)
T cd08398 78 LSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLW 120 (158)
T ss_pred EEEEEEecccCCCCceEEEEEEEEEEECCCChhhCCCEEEEEE
Confidence 9999965321 1246999999975 478897766654
No 161
>cd04012 C2A_PI3K_class_II C2 domain first repeat present in class II phosphatidylinositol 3-kinases (PI3Ks). There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. Class II PIK3s act downstream of receptors for growth factors, integrins, and chemokines. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that c
Probab=96.89 E-value=0.0079 Score=57.81 Aligned_cols=114 Identities=24% Similarity=0.212 Sum_probs=75.1
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCc-eeeecccc--CCCC--CCccCcEEEEeeec---CC
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTL--EDNW--IPSWNEEFEFPLSV---PE 532 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~-~k~kTkvi--~nn~--NPvWNEtf~F~v~~---pe 532 (591)
...++|+|.++.+++.... ....|.||++.+......- ....|+.. .+.+ .+.|||.++|++.. |-
T Consensus 7 ~~~~~i~v~~~h~~~~~~~------~~~~~~~v~~~l~~g~~~L~~~~~T~~~~~~~~f~~~~~Wnewl~F~i~i~~LPr 80 (171)
T cd04012 7 TDLLSVTVSSLHRIPPTWV------QSFEDFYLSCSLYHGGRLLCSPVTTKPVKITKSFFPRVVWDEWIEFPIPVCQLPR 80 (171)
T ss_pred cccEEEEEEEeecCChHHh------hccccEEEEEEEEECCEECcCceeccccccccCccccccccceEECccchhcCCh
Confidence 3458999999998875321 1235679999887422111 12244432 2332 57899999998764 44
Q ss_pred ccEEEEEEEeccCCC---------CCCccEEEEEECC----ccCCcceEEEccC-CCCCccc
Q 007734 533 LALLRIEVHEYDMSE---------KDDFGGQTCLPVS----ELKQGIRAVPLHD-RKGERYK 580 (591)
Q Consensus 533 la~Lrf~V~D~d~~~---------~dd~lGq~~ipL~----sL~~GyR~vpL~d-~~g~~~~ 580 (591)
.|.|.|++|+..... ....||++.+||= .|++|...+.|.- ....+++
T Consensus 81 earL~itl~~~~~~~~~~~~~~~~~~~~lG~~~~~LFd~~~~L~~G~~~L~lW~~~~~~~~~ 142 (171)
T cd04012 81 ESRLVLTLYGTTSSPDGGSNKQRMGPEELGWVSLPLFDFRGVLRQGSLLLGLWPPSKDNPLG 142 (171)
T ss_pred hHEEEEEEEEEecCCccccccccccceEEEEEeEeeEcchhhhccCCEEEEeccCCccCcCC
Confidence 489999999966443 3468999999984 4789999988863 3444443
No 162
>cd08693 C2_PI3K_class_I_beta_delta C2 domain present in class I beta and delta phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, beta and delta isoforms of PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Ty
Probab=96.87 E-value=0.014 Score=56.35 Aligned_cols=103 Identities=20% Similarity=0.201 Sum_probs=69.5
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCC-ceeeeccccCCCCCCccCcEEEEeeec---CCccEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALLR 537 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d-~~k~kTkvi~nn~NPvWNEtf~F~v~~---pela~Lr 537 (591)
..++|+|+++.++.. .....+.||++.+...... +....|+.+.-+-.+.|||.++|++.. |-.|.|.
T Consensus 8 ~~f~i~i~~~~~~~~--------~~~~~~l~V~~~lyhG~~~L~~p~~T~~~~~~~~~~Wnewl~F~I~i~dLPr~ArLc 79 (173)
T cd08693 8 EKFSITLHKISNLNA--------AERTMKVGVQAGLFHGGESLCKTVKTSEVSGKNDPVWNETLEFDINVCDLPRMARLC 79 (173)
T ss_pred CCEEEEEEEeccCcc--------CCCCceEEEEEEEEECCEEccCceEccccCCCCccccceeEEcccchhcCChhHeEE
Confidence 358999999998853 0123466888887642211 122345544434569999999998764 4458999
Q ss_pred EEEEeccCCC----------------CCCccEEEEEECC----ccCCcceEEEcc
Q 007734 538 IEVHEYDMSE----------------KDDFGGQTCLPVS----ELKQGIRAVPLH 572 (591)
Q Consensus 538 f~V~D~d~~~----------------~dd~lGq~~ipL~----sL~~GyR~vpL~ 572 (591)
|+||+..... ....||++.++|= .|++|...+.|.
T Consensus 80 iti~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~n~~LFd~~~~Lr~G~~~L~lW 134 (173)
T cd08693 80 FAIYEVSKKAKGKRSRKNQTKKKKKKDDNPIAWVNTMVFDYKGQLKTGDHTLYMW 134 (173)
T ss_pred EEEEEecccccccccccccccccccCcceEEEEEeEEEEcccchhhcCCeEEEec
Confidence 9999865321 1358999999875 478898777664
No 163
>cd08616 PI-PLCXD1c Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing 1. This subfamily corresponds to the catalytic domain present in a group of phosphatidylinositol-specific phospholipase C X domain containing 1 (PI-PLCXD1), 2 (PI-PLCXD2) and 3 (PI-PLCXD3), which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs found in vertebrates. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, members in this group contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to
Probab=96.86 E-value=0.01 Score=61.85 Aligned_cols=136 Identities=19% Similarity=0.274 Sum_probs=89.9
Q ss_pred CCcccceeeeccCcccc--cC-CCCCCC------------------------CChHHHHHHHhCCCcEEEEEeecCCCCC
Q 007734 112 TAPVSHYFIYTGHNSYL--TG-NQLNSD------------------------CSDVPIIRALQKGVRVIELDIWPNSKKD 164 (591)
Q Consensus 112 ~~PLs~YfI~SSHNTYL--~g-~Ql~g~------------------------Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~ 164 (591)
+.||.+..|--|||+-- .. +.-.|. .--.....-|..|+|-+.|.+--.++++
T Consensus 7 ~~~L~~l~iPGsHdS~ty~~~~~s~~~pd~~~~~~~~~~~~~~~~~v~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~ 86 (290)
T cd08616 7 DKPLTNLAIPGSHDSFTYSIDKQSPVSPDQSVQNLVKVFPCIFKKIVKKWSKTQSLTITEQLEAGIRYFDLRIATKPKDN 86 (290)
T ss_pred hCchheEecCCCCCccceecCCCCCCCchhhhhhhhhhcccchhhhhhHHhhCCCCcHHHHHhcCceEEEEEecccCCCC
Confidence 35999999999999632 22 211111 1112245567889999999996433234
Q ss_pred CceEeeCCcccccchHHHHHHHHhhhccccCCCceEEeeccCC---CHHHHHHHHHHHHHHhhccccCCCCCCCCCCCCh
Q 007734 165 NVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL---TPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSP 241 (591)
Q Consensus 165 ~piv~HG~tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hc---s~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP 241 (591)
+-.++||-. +. ++.||++.|+++.=....=-|||.+. |+ +.++-..+.+.|+++||+.|+.+.. ...-|+.
T Consensus 87 ~~~~~Hg~~--~~-~~~~~L~~i~~fl~~~p~Evvil~~~-~~~~~~~~~~~~l~~~l~~~fg~~l~~~~~--~~~~~tL 160 (290)
T cd08616 87 DLYFVHGLY--GI-LVKEILEEINDFLTEHPKEVVILDFN-HFYGMTEEDHEKLLKMIKSIFGKKLCPRDP--DLLNVTL 160 (290)
T ss_pred cEEEEEecc--ch-hHHHHHHHHHHHHHHCCCcEEEEEEE-ccCCCCHHHHHHHHHHHHHHhcccccCCCC--CcCcCcH
Confidence 578999843 22 99999999999753333455888886 43 3455567888999999999985432 1345789
Q ss_pred hhcc---ccEEEecC
Q 007734 242 ESLK---RRIIISTK 253 (591)
Q Consensus 242 ~~Lk---~KIlik~K 253 (591)
++|. .+|||-..
T Consensus 161 ~~l~~~~krVIi~y~ 175 (290)
T cd08616 161 EYLWEKGYQVIVFYH 175 (290)
T ss_pred HHHHhCCCEEEEEEC
Confidence 9997 33555443
No 164
>cd08380 C2_PI3K_like C2 domain present in phosphatidylinositol 3-kinases (PI3Ks). C2 domain present in all classes of PI3Ks. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm
Probab=96.80 E-value=0.016 Score=54.73 Aligned_cols=103 Identities=18% Similarity=0.190 Sum_probs=68.7
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCce-eeeccccCCCCCCccCcEEEEeeecCC---ccEEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTV-MKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRI 538 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~-k~kTkvi~nn~NPvWNEtf~F~v~~pe---la~Lrf 538 (591)
.++|+|.+..+... ......+.||++.+........ ...|+.....-++.|||.++|++...+ .|.|.|
T Consensus 9 ~~~i~i~~~~~~~~-------~~~~~~~l~V~~~l~~g~~~l~~~~~t~~~~~~~~~~Wne~l~F~i~~~~LP~~arL~i 81 (156)
T cd08380 9 NLRIKIHGITNINL-------LDSEDLKLYVRVQLYHGGEPLCPPQSTKKVPFSTSVTWNEWLTFDILISDLPREARLCL 81 (156)
T ss_pred CeEEEEEeeccccc-------cCCCceeEEEEEEEEECCEEccCceeccCCcCCCCCcccceeEccchhhcCChhheEEE
Confidence 47788887776532 0112356788888774221111 223433333357999999999876444 489999
Q ss_pred EEEeccCCC--CCCccEEEEEECC----ccCCcceEEEcc
Q 007734 539 EVHEYDMSE--KDDFGGQTCLPVS----ELKQGIRAVPLH 572 (591)
Q Consensus 539 ~V~D~d~~~--~dd~lGq~~ipL~----sL~~GyR~vpL~ 572 (591)
+||+.+... ....||++.+||= .|++|...+.|.
T Consensus 82 tl~~~~~~~~~~~~~iG~~~~~lFd~~~~L~~G~~~l~lW 121 (156)
T cd08380 82 SIYAVSEPGSKKEVPLGWVNVPLFDYKGKLRQGMITLNLW 121 (156)
T ss_pred EEEEEecCCCCcceEEEEEeEEeEcccCcEecCCEEEecc
Confidence 999976443 3578999999985 478999888886
No 165
>KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.78 E-value=0.00031 Score=72.45 Aligned_cols=98 Identities=22% Similarity=0.282 Sum_probs=75.6
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCC---ccEEEE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRI 538 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pe---la~Lrf 538 (591)
..+..+|..|.+|.. .+..+..||||+..+...-....+.+|++..|++||.|||+..+.....+ .-.+|+
T Consensus 93 ~~~~~tl~~a~~lk~------~~~~~~~d~~~~~~llpga~kl~slr~~t~~n~lN~~w~etev~~~i~~~~~~~K~~Rk 166 (362)
T KOG1013|consen 93 RMLDTTLDRAKGLKP------MDINGLADPYVKLHLLPGAGKLNSLRTKTTRNTLNPEWNETEVYEGITDDDTHLKVLRK 166 (362)
T ss_pred hhcceeechhcccch------hhhhhhcchHHhhhcccchhhhhhhhHHhhccCcCcceeccceecccccchhhhhhhhe
Confidence 457888888888732 35567789999988775544555689999999999999988766543322 245889
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc
Q 007734 539 EVHEYDMSEKDDFGGQTCLPVSELKQG 565 (591)
Q Consensus 539 ~V~D~d~~~~dd~lGq~~ipL~sL~~G 565 (591)
.|.|.+-...++++||..+++..|.+-
T Consensus 167 ~vcdn~~~~~~~sqGq~r~~lkKl~p~ 193 (362)
T KOG1013|consen 167 VVCDNDKKTHNESQGQSRVSLKKLKPL 193 (362)
T ss_pred eeccCcccccccCcccchhhhhccChh
Confidence 999999888899999999998888654
No 166
>PLN02964 phosphatidylserine decarboxylase
Probab=96.77 E-value=0.003 Score=72.09 Aligned_cols=87 Identities=22% Similarity=0.169 Sum_probs=70.8
Q ss_pred CceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEE
Q 007734 460 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE 539 (591)
Q Consensus 460 ~~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~ 539 (591)
..+...|+|++|. . .-.|+|..+-..| .+.+||.+.+++.||+||+...|.|...+..+.+|.
T Consensus 52 ~~~~~~~~~~~~~-~------------~~~~~~~~~~~~g----~~~f~t~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 114 (644)
T PLN02964 52 FSGIALLTLVGAE-M------------KFKDKWLACVSFG----EQTFRTETSDSTDKPVWNSEKKLLLEKNGPHLARIS 114 (644)
T ss_pred ccCeEEEEeehhh-h------------ccCCcEEEEEEec----ceeeeeccccccCCcccchhhceEeccCCcceEEEE
Confidence 3456788888886 1 1137776555556 578999999999999999999999988888889999
Q ss_pred EEeccCCCCCCccEEEEEECCccC
Q 007734 540 VHEYDMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 540 V~D~d~~~~dd~lGq~~ipL~sL~ 563 (591)
|+|.+..+.++++|-+.+.|..+-
T Consensus 115 ~~~~~~~s~n~lv~~~e~~~t~f~ 138 (644)
T PLN02964 115 VFETNRLSKNTLVGYCELDLFDFV 138 (644)
T ss_pred EEecCCCCHHHhhhheeecHhhcc
Confidence 999999999999999998776653
No 167
>cd08556 GDPD Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins. The typical glycerophosphodiester phosphodiesterase domain (GDPD) consists of a TIM barrel and a small insertion domain named the GDPD-insertion (GDPD-I) domain, which is specific for GDPD proteins. This family corresponds to both typical GDPD domain and GDPD-like domain which lacks the GDPD-I region. Members in this family mainly consist of a large family of prokaryotic and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), and a number of uncharacterized homologs. Sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria are also included in this family. GDPD plays an essential role in glycerol metabolism and catalyzes the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcoho
Probab=96.47 E-value=0.013 Score=56.04 Aligned_cols=63 Identities=21% Similarity=0.213 Sum_probs=51.2
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhhccccCCCceEEeeccCCCH
Q 007734 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTP 209 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hcs~ 209 (591)
...+-|.++|..|+.+||++||+|+.=-.| +.|||.|- -.+|.||++..++ -+.|.||.-...
T Consensus 10 ~~pent~~a~~~a~~~g~~~iE~Dv~~tkD-g~~vv~Hd-----i~tL~e~l~~~~~--------~~~i~leiK~~~ 72 (189)
T cd08556 10 EAPENTLAAFRKALEAGADGVELDVQLTKD-GVLVVIHD-----IPTLEEVLELVKG--------GVGLNIELKEPT 72 (189)
T ss_pred CCCchHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEEcC-----CCCHHHHHHhccc--------CcEEEEEECCCC
Confidence 456899999999999999999999995444 36899998 7789999988776 355777776653
No 168
>cd08562 GDPD_EcUgpQ_like Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), UgpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two distinct GP-GDEs. UgpQ gene from the E. coli ugp operon codes for a cytosolic phosphodiesterase GlpQ, which is the prototype of this family. Various glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG)
Probab=96.40 E-value=0.0099 Score=59.27 Aligned_cols=40 Identities=20% Similarity=0.317 Sum_probs=33.9
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
.-+-|.++|..|+..|+.+||+||+=-.| +.+||.|-.||
T Consensus 11 ~pENT~~af~~A~~~gad~iE~Dv~~TkD-g~lvv~HD~~l 50 (229)
T cd08562 11 APENTLAAFRAAAELGVRWVEFDVKLSGD-GTLVLIHDDTL 50 (229)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEeECCC-CCEEEEcCCCC
Confidence 35788999999999999999999996555 46999997665
No 169
>cd08582 GDPD_like_2 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=96.37 E-value=0.017 Score=58.00 Aligned_cols=40 Identities=18% Similarity=0.217 Sum_probs=34.3
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
.-+-|.++|..|+..||++||+|++=-.| +.|||.|-.|+
T Consensus 11 ~pENTl~af~~A~~~G~~~vE~Dv~lTkD-g~~Vv~HD~~l 50 (233)
T cd08582 11 APENTLAAFELAWEQGADGIETDVRLTKD-GELVCVHDPTL 50 (233)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEEEccC-CCEEEecCCcc
Confidence 45788999999999999999999995444 46999998776
No 170
>cd08397 C2_PI3K_class_III C2 domain present in class III phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. These are the only domains identified in the class III PI3Ks present in this cd. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Ty
Probab=96.26 E-value=0.02 Score=54.43 Aligned_cols=85 Identities=19% Similarity=0.233 Sum_probs=59.9
Q ss_pred CCCceEEEEEeccCCC-ceeeeccccCCCCCCccCcEEEEeeecCCc---cEEEEEEEeccCCCCCCccEEEEEECC---
Q 007734 488 PPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL---ALLRIEVHEYDMSEKDDFGGQTCLPVS--- 560 (591)
Q Consensus 488 ~~DpyV~V~i~g~p~d-~~k~kTkvi~nn~NPvWNEtf~F~v~~pel---a~Lrf~V~D~d~~~~dd~lGq~~ipL~--- 560 (591)
.+|.||++.+...... .....|+.+.-+-.+.|||-..|+|...++ |.|.|+||+.+..+....+|.+++||=
T Consensus 29 ~~~l~V~~~l~~~~~~L~~pv~T~~~~f~~~~~WnEwl~fpI~i~dLP~~a~L~iti~~~~~~~~~~~vg~~~~~lFd~~ 108 (159)
T cd08397 29 NSDLFVTCQVFDDGKPLTLPVQTSYKPFKNRRNWNEWLTLPIKYSDLPRNSQLAITIWDVSGTGKAVPFGGTTLSLFNKD 108 (159)
T ss_pred CCCEEEEEEEEECCEeccCcEEccccCCCCCcccceeEEcccchhcCChhheEEEEEEEecCCCCceEEEEEEEeeECCC
Confidence 3577999888742111 112244444434468899999999876554 899999999875545678999999975
Q ss_pred -ccCCcceEEEcc
Q 007734 561 -ELKQGIRAVPLH 572 (591)
Q Consensus 561 -sL~~GyR~vpL~ 572 (591)
.|+.|...+.|.
T Consensus 109 g~Lr~G~~~l~lw 121 (159)
T cd08397 109 GTLRRGRQKLRVW 121 (159)
T ss_pred CcEecCCEEEEEE
Confidence 478898888775
No 171
>cd08579 GDPD_memb_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.
Probab=96.07 E-value=0.016 Score=57.64 Aligned_cols=40 Identities=13% Similarity=0.227 Sum_probs=34.4
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
.-+.|..+|..|+..||..||+||+=-.| +.|+|.|-.||
T Consensus 11 ~pENT~~af~~A~~~Gad~vE~DV~~T~D-g~~vv~HD~~l 50 (220)
T cd08579 11 GVENTLEALEAAIKAKPDYVEIDVQETKD-GQFVVMHDANL 50 (220)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEEcCCch
Confidence 45788999999999999999999996555 46999998775
No 172
>PF03009 GDPD: Glycerophosphoryl diester phosphodiesterase family; InterPro: IPR004129 Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol) all of which are are hydrolysed by this enzyme.; GO: 0008889 glycerophosphodiester phosphodiesterase activity, 0006071 glycerol metabolic process; PDB: 3I10_A 2P76_H 2OOG_F 3KS6_D 3KS5_A 2PZ0_B 1YDY_B 1T8Q_A 1O1Z_A 3L12_B ....
Probab=96.06 E-value=0.0086 Score=59.74 Aligned_cols=40 Identities=23% Similarity=0.255 Sum_probs=32.0
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
..+.|.++|..|+..|+++||+|||=-.| +.|||+|..++
T Consensus 8 ~pENTl~af~~A~~~G~~~iE~Dv~lTkD-g~~Vv~HD~~l 47 (256)
T PF03009_consen 8 APENTLAAFRAAIELGADGIELDVQLTKD-GVPVVFHDDTL 47 (256)
T ss_dssp SSTTSHHHHHHHHHTTSSEEEEEEEE-TT-S-EEE-SSSBS
T ss_pred ChhhHHHHHHHHHHhCCCeEcccccccCC-ceeEeccCCee
Confidence 34899999999999999999999996555 47999998654
No 173
>cd08684 C2A_Tac2-N C2 domain first repeat found in Tac2-N (Tandem C2 protein in Nucleus). Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphos
Probab=96.05 E-value=0.012 Score=49.92 Aligned_cols=59 Identities=19% Similarity=0.247 Sum_probs=47.2
Q ss_pred ceeeeccccCCCCCCccCcEEEEeeecCCc--cEEEEEEEeccCCCCCCccEEEEEECCccCC
Q 007734 504 TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 564 (591)
Q Consensus 504 ~~k~kTkvi~nn~NPvWNEtf~F~v~~pel--a~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~ 564 (591)
....||.+.+...||+|.|+|.|.+....+ ..|.|.|+.. ..+...||++.+.++++.+
T Consensus 34 pv~~KsS~rrgs~d~~f~ETFVFqi~l~qL~~V~L~fsv~~~--~~RKe~iG~~sL~l~s~ge 94 (103)
T cd08684 34 PVHFKSSAKEGSNDIEFMETFVFAIKLQNLQTVRLVFKIQTQ--TPRKRTIGECSLSLRTLST 94 (103)
T ss_pred CccccchhhcCCCChhHHHHHHHHHHHhhccceEEEEEeecc--CCccceeeEEEeecccCCH
Confidence 456789888888999999999999876555 4577888873 3457899999999988753
No 174
>cd08563 GDPD_TtGDE_like Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.
Probab=95.82 E-value=0.026 Score=56.48 Aligned_cols=40 Identities=23% Similarity=0.372 Sum_probs=34.2
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
.-+.|.++|.+|+..||++||+|++=-.| +.|||.|-.|+
T Consensus 13 ~pENT~~Af~~A~~~g~~~vE~DV~~TkD-g~~Vv~HD~~l 52 (230)
T cd08563 13 APENTLLAFKKAIEAGADGIELDVHLTKD-GQLVVIHDETV 52 (230)
T ss_pred CCchhHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCCc
Confidence 46889999999999999999999996555 46999997665
No 175
>cd08399 C2_PI3K_class_I_gamma C2 domain present in class I gamma phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, gamma isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a cir
Probab=95.78 E-value=0.066 Score=51.81 Aligned_cols=102 Identities=14% Similarity=0.087 Sum_probs=63.3
Q ss_pred eEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCC---ccEEEEE
Q 007734 463 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRIE 539 (591)
Q Consensus 463 ~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pe---la~Lrf~ 539 (591)
.++|+|.++..... +.......||++.+.....-....+|.....+-+|.|||-++|++...+ .|.|.|+
T Consensus 11 ~friki~~~~~~~~-------~~~~~~~l~V~~~Ly~g~~~l~~~~T~~~~~~~~~~WnEwL~f~I~~~dLP~~arLc~t 83 (178)
T cd08399 11 KFRVKILGIDIPVL-------PRNTDLTVFVEANIQHGQQVLCQRRTSPKPFTEEVLWNTWLEFDIKIKDLPKGALLNLQ 83 (178)
T ss_pred CEEEEEEeecccCc-------CCCCceEEEEEEEEEECCeecccceeeccCCCCCccccccEECccccccCChhhEEEEE
Confidence 37888888763311 1111234588887764211112234555544557999999999987554 4899999
Q ss_pred EEeccCCC----------------CCCccEEEEEECC----ccCCcceEEEc
Q 007734 540 VHEYDMSE----------------KDDFGGQTCLPVS----ELKQGIRAVPL 571 (591)
Q Consensus 540 V~D~d~~~----------------~dd~lGq~~ipL~----sL~~GyR~vpL 571 (591)
||+..... ....||++.++|= .|++|...+.+
T Consensus 84 i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~wvn~~LFD~~~~Lr~G~~~L~~ 135 (178)
T cd08399 84 IYCGKAPALSSKKSAESPSSESKGKHQLLYYVNLLLIDHRFLLRTGEYVLHM 135 (178)
T ss_pred EEEEecCcccccccccccccccccccceEEEEEEEEEcCCCceecCCEEEEE
Confidence 99853211 1346888888875 47888766655
No 176
>cd08577 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=95.71 E-value=0.031 Score=56.27 Aligned_cols=97 Identities=20% Similarity=0.248 Sum_probs=65.6
Q ss_pred ccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccc------cchHHHHHHHHhhh--cc-
Q 007734 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA------PVELIKCLRSIKEY--AF- 192 (591)
Q Consensus 122 SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts------~i~f~dvi~aI~~~--AF- 192 (591)
-|||-|.--.= ...||..||-.||+|||=- + ++.+|.|-..+.. +..+..+.+.++.. +|
T Consensus 4 hsHNDY~r~~P---------l~~Al~~g~~svEaDV~l~-d-g~l~V~Hd~~~l~~~~tl~~Lyl~pL~~~l~~~n~~~~ 72 (228)
T cd08577 4 HSHNDYWRKRP---------LYDALSAGFGSIEADVWLV-N-GDLLVAHDEVDLSPARTLESLYLDPLLEILDQNNGQAY 72 (228)
T ss_pred ccccccccccc---------hHHHHHcCCCEEEEeEEEE-C-CEEEEEcChhHcCccCCHHHHhHHHHHHHHHHcCCCCC
Confidence 59999987443 4569999999999999953 2 3678888765443 34566666655443 23
Q ss_pred ccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccC
Q 007734 193 VASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFT 229 (591)
Q Consensus 193 ~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~ 229 (591)
....-|++|-||..-+...--.++.-.-+-+.+..+.
T Consensus 73 ~~~~~~l~LlIDiKt~g~~t~~~l~~~L~~~~~~~~~ 109 (228)
T cd08577 73 NDPEQPLQLLIDIKTDGESTYPALEEVLKPYIDIGYL 109 (228)
T ss_pred CCCCCceEEEEEECCCChHHHHHHHHHHHHHHhcCce
Confidence 4456799999999998654433444444456666554
No 177
>cd08620 PI-PLCXDc_like_1 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins. This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl
Probab=95.62 E-value=0.1 Score=54.26 Aligned_cols=139 Identities=17% Similarity=0.209 Sum_probs=89.7
Q ss_pred CCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEe---ecC----CCCCCceEeeCCcccccchHHHHH
Q 007734 112 TAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDI---WPN----SKKDNVDVLHGGTMTAPVELIKCL 184 (591)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~---Wdg----~~~~~piv~HG~tlts~i~f~dvi 184 (591)
+.||++..|--|||+.-.+---.+..--.....=|..|+|-+.|=| ++. ...++-..+|| +-...+|.+++
T Consensus 6 ~~~l~~l~iPGtHDSg~~~~~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~~~~~~~~~~~~~Hg--~~~~~~l~~~L 83 (281)
T cd08620 6 QQPFNRFVLPGAHDAGMNGMTNLSVTQKDNVSTQLALGARYFDFRPGYLWPQTRVLVLLNDLYHQHN--MIPGQGFDTFL 83 (281)
T ss_pred CcchhheeecCCCcccccCCCchhhcCCccHHHHHhcCcEEEEEEeeeccCccccccccCcEEEEee--ccCCCcHHHHH
Confidence 5799999999999987655322223333446777899999988765 211 01123335555 34567999999
Q ss_pred HHHhhhccccCCCceEEeecc-----CC-CHHHHHHHHHHHHHHhhccccCCC--CCCCCCCCChhhccc---cEEEecC
Q 007734 185 RSIKEYAFVASEYPVVITLED-----HL-TPDLQAKVAEMVTQTLGEILFTPG--SECLKEFPSPESLKR---RIIISTK 253 (591)
Q Consensus 185 ~aI~~~AF~~S~yPvILSlE~-----Hc-s~~qQ~~ma~~l~~~~Gd~L~~~~--~~~~~~lPSP~~Lk~---KIlik~K 253 (591)
+.|+.+.=....=-|||+|-+ || .+.+ ..+.+.+.++|++.-+.+. ......-|+.++|.+ ++||--+
T Consensus 84 ~~i~~FL~~~p~EvVil~~~~~~~~~d~~~p~~-~~l~~~l~~~f~~~~~~~~~~~~~~~~~~TL~~L~~~gkrvIv~y~ 162 (281)
T cd08620 84 QDVVTFLKANPTEIVVVHITWDGFDNDCARPSA-QEVVEALAQALASAKVGYVTSGTVSDLAASYAQLRQTGKRLIVLFG 162 (281)
T ss_pred HHHHHHHHHCCCcEEEEEEEcCCccccccChhH-HHHHHHHHHHhhccCccccCCCccccccCcHHHHHhCCCEEEEEEc
Confidence 999987555555679999943 44 3554 5778889999988555432 111234578888854 4555443
No 178
>cd08619 PI-PLCXDc_plant Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing proteins found in plants. The CD corresponds to the catalytic domain present in uncharacterized plant phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, plant PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although the biological function of plant PI-PLCXDs still remains u
Probab=95.48 E-value=0.072 Score=55.08 Aligned_cols=137 Identities=17% Similarity=0.243 Sum_probs=89.6
Q ss_pred cCCCCcccceeeeccCcccccC---CCCC---CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHH
Q 007734 109 HDMTAPVSHYFIYTGHNSYLTG---NQLN---SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182 (591)
Q Consensus 109 qdM~~PLs~YfI~SSHNTYL~g---~Ql~---g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~d 182 (591)
-|-+.||++=.|--||||.-.. ..+. +.+--..+..=|..|+|-++|-|=. ...++||.. ...+|.+
T Consensus 23 ~~~~l~L~~L~IPGTHDS~t~~~~~~~~~~~~s~tQ~~sI~~QL~~GiRyfDiRv~~-----~~~~~HG~~--~~~~~~d 95 (285)
T cd08619 23 MDSSLKLRDIVWPGTHDSATNKIGIPKVSRPFARCQSLSIYNQLCSGARVLDIRVQE-----DRRVCHGCL--KTYPVDV 95 (285)
T ss_pred CCCCcEeeheeeCCCccccccCCCCCccccccccccCCcHHHHHhCCceEEEEEecC-----CeEEECCCc--CCCcHHH
Confidence 3456899999999999987532 2211 1222234677789999999998854 257999963 2368999
Q ss_pred HHHHHhhhccccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhcccc-EEEecCC
Q 007734 183 CLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRR-IIISTKP 254 (591)
Q Consensus 183 vi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~~~~~~~lPSP~~Lk~K-Ilik~K~ 254 (591)
|++.|+++-=....=-|||++......+......+.+.+.||+.|+.+. ...... +.++|.+| |||-.+.
T Consensus 96 vL~~i~~FL~~hp~EvVIL~~k~ey~~~~~~~~~~~li~~lGd~l~~~~-~~~~~~-TL~eL~~krVIviy~~ 166 (285)
T cd08619 96 VLNDIKRFLSETKSEFVILEIRTEYGHEDPPQFDLWLVEQLGDHLIHQD-DSVFSK-TLAELLPKRVICIWKP 166 (285)
T ss_pred HHHHHHHHHHHCCCeEEEEEEeecccCCCchHHHHHHHHHhcchhccCC-Cccccc-cHHHHhCCcEEEEEcC
Confidence 9999998643333344999996554322222355788999999998753 221222 66776644 5555554
No 179
>cd08567 GDPD_SpGDE_like Glycerophosphodiester phosphodiesterase domain of putative Silicibacter pomeroyi glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and similar proteins. The prototype of this CD is a putative GP-GDE from Silicibacter pomeroyi (SpGDE). It shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=95.43 E-value=0.056 Score=55.05 Aligned_cols=40 Identities=23% Similarity=0.306 Sum_probs=34.7
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
=+-|.++|..|+..||..||+||+=-.| +.|||+|-.||.
T Consensus 14 pENT~~Af~~A~~~Gad~vE~DV~~TkD-g~~Vv~HD~~l~ 53 (263)
T cd08567 14 PENTLPAFAKALDLGVDTLELDLVLTKD-GVIVVSHDPKLN 53 (263)
T ss_pred CcchHHHHHHHHHcCCCEEEEEEEEcCC-CCEEEeCCCccC
Confidence 4778999999999999999999996555 469999999873
No 180
>PF00792 PI3K_C2: Phosphoinositide 3-kinase C2; InterPro: IPR002420 Phosphatidylinositol 3-kinase (PI3-kinase) (2.7.1.137 from EC) is an enzyme that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring. The usually N-terminal C2 domain interacts mainly with the scaffolding helical domain of the enzyme, and exhibits only minor interactions with the catalytic domain []. The domain consists of two four-stranded antiparallel beta-sheets that form a beta-sandwich. Isolated C2 domain binds multilamellar phospholipid vesicles which suggests that this domain could play a role in membrane association. Membrane attachment by C2 domains is typically mediated by the loops connecting beta-strand regions that in other C2 domain-containing proteins are calcium-binding region; GO: 0016303 1-phosphatidylinositol-3-kinase activity, 0046854 phosphatidylinositol phosphorylation, 0048015 phosphatidylinositol-mediated signaling, 0005942 phosphatidylinositol 3-kinase complex; PDB: 1E8W_A 1E8X_A 1E7V_A 1E90_A 1E7U_A 3L54_A 1E8Z_A 2CHX_A 3ML8_A 3OAW_A ....
Probab=95.27 E-value=0.05 Score=50.52 Aligned_cols=82 Identities=23% Similarity=0.327 Sum_probs=53.8
Q ss_pred ceEEEEEeccCCCc--eeeeccccCCC-CCCccCcEEEEeeec---CCccEEEEEEEeccCCCCC----CccEEEEEECC
Q 007734 491 FYARVGIAGVPADT--VMKKTKTLEDN-WIPSWNEEFEFPLSV---PELALLRIEVHEYDMSEKD----DFGGQTCLPVS 560 (591)
Q Consensus 491 pyV~V~i~g~p~d~--~k~kTkvi~nn-~NPvWNEtf~F~v~~---pela~Lrf~V~D~d~~~~d----d~lGq~~ipL~ 560 (591)
.||++.+.-....- ....|+.+.-+ .++.|||.++|++.. |-.|.|.|+||+.+..... ..||++.+||=
T Consensus 4 ~~V~~~ly~g~~~L~~p~~~T~~~~~~~~~~~W~e~l~F~i~i~~LPr~a~L~~~l~~~~~~~~~~~~~~~lgw~n~~lF 83 (142)
T PF00792_consen 4 LYVECQLYHGGEPLCNPVQSTSYVPFSFSRPKWDEWLTFPIPISDLPREARLCFTLYGVDSKKKSKKKKVPLGWVNLPLF 83 (142)
T ss_dssp EEEEEEEEETTEESS-EEEE-S-EESS-SSEEEEEEEEEEEEGGGS-TTEEEEEEEEEEECSTTT--EEEEEEEEEEESB
T ss_pred EEEEEEEEECCEEeecCeeeccccccccccceEeeEEEeecChHHCChhHeEEEEEEEecCCCccccceeEEEEEEEEeE
Confidence 36666665221111 12256655555 689999999999764 5558999999997755434 58999999975
Q ss_pred c----cCCcceEEEcc
Q 007734 561 E----LKQGIRAVPLH 572 (591)
Q Consensus 561 s----L~~GyR~vpL~ 572 (591)
. |++|...++|.
T Consensus 84 d~~~~L~~G~~~L~lW 99 (142)
T PF00792_consen 84 DYRGQLRQGPQKLSLW 99 (142)
T ss_dssp -TTSBBEEEEEEEE-E
T ss_pred CCCCcccCCCEEEEEE
Confidence 4 67888888775
No 181
>cd08565 GDPD_pAtGDE_like Glycerophosphodiester phosphodiesterase domain of putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (pAtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=95.05 E-value=0.12 Score=52.24 Aligned_cols=39 Identities=26% Similarity=0.389 Sum_probs=33.2
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
-+-|..++.+|+..||..||+|+|=-.| +.|||.|=.|+
T Consensus 12 pENTl~af~~A~~~G~d~iE~DV~~TkD-g~~Vv~HD~~l 50 (235)
T cd08565 12 PENTLEGFRKALELGVDAVEFDVHLTAD-GEVVVIHDPTL 50 (235)
T ss_pred CccHHHHHHHHHHcCCCEEEEeEEEccC-CCEEEECCChh
Confidence 4778999999999999999999995444 36999997765
No 182
>cd08566 GDPD_AtGDE_like Glycerophosphodiester phosphodiesterase domain of Agrobacterium tumefaciens and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (AtGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homolgoues. Members in this family shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. AtGDE exists as a hexamer that is a trimer of dimers, which is unique among current known GDPD family members. However, it remains unclear if the hexamer plays a physiological role in AtGDE enzymatic function.
Probab=94.97 E-value=0.094 Score=53.09 Aligned_cols=65 Identities=18% Similarity=0.261 Sum_probs=49.4
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc--c------------------------------cchHHH
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT--A------------------------------PVELIK 182 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt--s------------------------------~i~f~d 182 (591)
-+-|..+|..|+..||+.||+|+.=-.| +.|||.|=.|+- + -.+|.|
T Consensus 14 pENTl~af~~A~~~g~d~iE~DV~~T~D-g~~vv~HD~~l~r~t~~~~~v~~~t~~el~~l~~~~~~~~~~~~~iptL~e 92 (240)
T cd08566 14 PENSLAAIEAAIDLGADIVEIDVRRTKD-GVLVLMHDDTLDRTTNGKGKVSDLTLAEIRKLRLKDGDGEVTDEKVPTLEE 92 (240)
T ss_pred CccHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCCCccccCCCCchhhCcHHHHHhCCcCCCcCCCCCCCCCCHHH
Confidence 3778999999999999999999996555 469999966551 1 134788
Q ss_pred HHHHHhhhccccCCCceEEeeccCCC
Q 007734 183 CLRSIKEYAFVASEYPVVITLEDHLT 208 (591)
Q Consensus 183 vi~aI~~~AF~~S~yPvILSlE~Hcs 208 (591)
|++.+++. +.|.||.-..
T Consensus 93 vl~~~~~~--------~~l~iEiK~~ 110 (240)
T cd08566 93 ALAWAKGK--------ILLNLDLKDA 110 (240)
T ss_pred HHHhhhcC--------cEEEEEECch
Confidence 88777652 6778887744
No 183
>cd08573 GDPD_GDE1 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE1 (also known as MIR16, membrane interacting protein of RGS16) and their metazoan homologs. GDE1 is widely expressed in mammalian tissues, including the heart, brain, liver, and kidney. It shows sequence homology to bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. GDE1 has been characterized as GPI-GDE (EC 3.1.4.44) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate glycerol phosphate and inositol. It functions as an integral membrane-bound glycoprotein interacting with regulator of G protein signaling protein RGS16, and is modulated by G
Probab=94.70 E-value=0.13 Score=52.67 Aligned_cols=40 Identities=15% Similarity=0.185 Sum_probs=33.1
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
.-+-|..+|..|+..||..||+|+|=-.| +.|||.|-.+|
T Consensus 11 ~pENTl~af~~A~~~Gad~iE~DV~lTkD-g~~Vv~HD~~l 50 (258)
T cd08573 11 APENTLAAFRQAKKNGADGVEFDLEFTKD-GVPVLMHDDTV 50 (258)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeECCC-CcEEEECCCCc
Confidence 45788999999999999999999996545 36899996544
No 184
>cd08564 GDPD_GsGDE_like Glycerophosphodiester phosphodiesterase domain of putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase (GsGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=94.58 E-value=0.13 Score=52.73 Aligned_cols=39 Identities=28% Similarity=0.451 Sum_probs=33.0
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGT 173 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~t 173 (591)
.-+-|..+|..|+..|+..||+|||=-.| +.|||+|..+
T Consensus 18 ~pENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~ 56 (265)
T cd08564 18 YPENTLPSFRRALEIGVDGVELDVFLTKD-NEIVVFHGTE 56 (265)
T ss_pred CCchhHHHHHHHHHcCCCEEEEeeEECCC-CCEEEEcCCc
Confidence 55888999999999999999999995444 4699999853
No 185
>cd08568 GDPD_TmGDE_like Glycerophosphodiester phosphodiesterase domain of Thermotoga maritime and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermotoga maritime glycerophosphodiester phosphodiesterase (TmGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. TmGDE exists as a monomer that might be the biologically relevant form.
Probab=94.53 E-value=0.16 Score=50.82 Aligned_cols=78 Identities=22% Similarity=0.344 Sum_probs=53.7
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc------------------------ccc-hHHHHHHHH
Q 007734 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT------------------------APV-ELIKCLRSI 187 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt------------------------s~i-~f~dvi~aI 187 (591)
..-+-|.+++..|+..||+.||+|++=-.| +.|||+|=.|+. .+| +|.||++.+
T Consensus 11 ~~pENTl~af~~A~~~Gad~iE~DV~lT~D-g~~Vv~HD~~l~R~t~~~g~v~~~t~~eL~~l~~~g~~iPtL~evl~~~ 89 (226)
T cd08568 11 KYPENTLEAFKKAIEYGADGVELDVWLTKD-GKLVVLHDENLKRVGGVDLKVKELTYKELKKLHPGGELIPTLEEVFRAL 89 (226)
T ss_pred CCCcchHHHHHHHHHcCcCEEEEEEEEcCC-CCEEEECCCcccccCCCCceeecCCHHHHhhCCCCCCcCCCHHHHHHhc
Confidence 345788999999999999999999995444 469999976652 124 589999876
Q ss_pred hhhccccCCCceEEeeccCCCHHHHHHHHHHHH
Q 007734 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVT 220 (591)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~ma~~l~ 220 (591)
+.. +.|-||.-.. .....+++.++
T Consensus 90 ~~~--------~~l~iEiK~~-~~~~~~~~~l~ 113 (226)
T cd08568 90 PND--------AIINVEIKDI-DAVEPVLEIVE 113 (226)
T ss_pred CCC--------cEEEEEECCc-cHHHHHHHHHH
Confidence 541 3466776643 22334444444
No 186
>KOG2060 consensus Rab3 effector RIM1 and related proteins, contain PDZ and C2 domains [Intracellular trafficking, secretion, and vesicular transport]
Probab=94.34 E-value=0.034 Score=58.73 Aligned_cols=107 Identities=23% Similarity=0.238 Sum_probs=77.8
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V 540 (591)
+..|.|+||.|++|.... .....++|||+|++.+...-..+.+|+...++..|.+-....|.=..| ...|.+.|
T Consensus 268 ~g~l~vEii~ar~l~~k~-----~~k~~~apyVkVYlL~~g~c~ak~ktk~A~kT~~plyqq~l~f~~sp~-~k~Lq~tv 341 (405)
T KOG2060|consen 268 KGDLEVEIIRARGLVVKP-----GSKSLPAPYVKVYLLENGFCIAKKKTKSARKTLDPLYQQQLSFDQSPP-GKYLQGTV 341 (405)
T ss_pred cCceeEEEEecccccccC-----CcccccCceeEEEEcCCCceecccccccccccCchhhhhhhhhccCCC-ccEEEEEE
Confidence 457999999999996421 112368999999998765555678999999999998888888765433 56788888
Q ss_pred Ee-ccCCCCCCccEEEEEECCccC----CcceEEEccC
Q 007734 541 HE-YDMSEKDDFGGQTCLPVSELK----QGIRAVPLHD 573 (591)
Q Consensus 541 ~D-~d~~~~dd~lGq~~ipL~sL~----~GyR~vpL~d 573 (591)
|. +.....+.|+|.+.+-+.+|. ++.-|.+|+-
T Consensus 342 ~gdygRmd~k~fmg~aqi~l~eL~ls~~~~igwyKlfg 379 (405)
T KOG2060|consen 342 WGDYGRMDHKSFMGVAQIMLDELNLSSSPVIGWYKLFG 379 (405)
T ss_pred eccccccchHHHhhHHHHHhhhhccccccceeeeeccC
Confidence 85 434445678998888888774 4456666663
No 187
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=94.27 E-value=0.18 Score=42.99 Aligned_cols=62 Identities=13% Similarity=0.343 Sum_probs=49.1
Q ss_pred HHHHHHHHhhC-C---CCcCHHHHHHHHHHH--cCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYSE-N---GTMTVDHLHRFLIEV--QKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~~-~---~~~~~~~~~~Fl~~~--Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.|-.+|.+|++ + ++|+.++|+..|.++ .++. .+.+++.+++..... -+.+.++++.|..+|.
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k-~t~~ev~~m~~~~D~------d~dG~Idf~EFv~lm~ 78 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSK-LQDAEIAKLMEDLDR------NKDQEVNFQEYVTFLG 78 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHhcC------CCCCCCcHHHHHHHHH
Confidence 47789999996 2 599999999999752 4654 688999999887642 1346899999999886
No 188
>cd08584 PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=93.81 E-value=0.26 Score=48.22 Aligned_cols=47 Identities=15% Similarity=0.124 Sum_probs=41.7
Q ss_pred ChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHh
Q 007734 138 SDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIK 188 (591)
Q Consensus 138 s~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI~ 188 (591)
+..++.+|+.. .-||+|++.- | +.+||.|=.|+..-.+|+||++++.
T Consensus 8 Tl~AF~~A~~~--dgvE~DVr~t-D-g~lVV~HD~~l~~~PtLeEvL~~~~ 54 (192)
T cd08584 8 TITALKRTFEN--FGVETDIRDY-G-GQLVISHDPFVKNGELLEDWLKEYN 54 (192)
T ss_pred HHHHHHHHHHC--CEEEEEEEee-C-CeEEEECCCCCCCCCCHHHHHHhcc
Confidence 57899999998 9999999986 5 5799999999988888999998874
No 189
>cd08575 GDPD_GDE4_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function is not elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests mammalian GDE4 may play some distinct role from other members of mammalian GDEs family. Also included in this subfamily are uncharacterized mammalian glycerophosphodiester phosphodiesterase domain-containing protein 3 (GDPD3) and similar proteins which display very high sequence homology to mammalian GDE4.
Probab=93.59 E-value=0.078 Score=54.46 Aligned_cols=40 Identities=20% Similarity=0.326 Sum_probs=35.0
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
-+-|.++|..|+..||++||+|++=-.| +.|||.|-.||.
T Consensus 14 pENTl~af~~A~~~G~d~iE~DV~lT~D-g~~Vv~HD~~l~ 53 (264)
T cd08575 14 PENTIAAFRHAVKNGADMLELDVQLTKD-GQVVVFHDWDLD 53 (264)
T ss_pred CccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEEcCCccc
Confidence 4778999999999999999999997655 479999998864
No 190
>cd08561 GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodiester phosphodiesterase domain of Streptomyces coelicolor cytoplasmic phosphodiesterases UgpQ2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized cytoplasmic phosphodiesterases which predominantly exist in bacteria. The prototype of this family is a putative cytoplasmic phosphodiesterase encoded by gene ulpQ2 (SCO1419) in the Streptomyces coelicolor genome. It is distantly related to the Escherichia coli cytoplasmic phosphodiesterases UgpQ that catalyzes the hydrolysis of glycerophosphodiesters at the inner side of the cytoplasmic membrane to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=93.28 E-value=0.091 Score=53.31 Aligned_cols=41 Identities=20% Similarity=0.321 Sum_probs=35.0
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
.-+-|.++|.+|+..||++||+|++=-.| +.|||+|-.||.
T Consensus 11 ~pENT~~af~~A~~~g~d~vE~Dv~~TkD-g~~Vv~HD~~l~ 51 (249)
T cd08561 11 APENTLLAFEDAVELGADVLETDVHATKD-GVLVVIHDETLD 51 (249)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeECCC-CCEEEECCCccc
Confidence 45788999999999999999999995444 479999998874
No 191
>KOG1327 consensus Copine [Signal transduction mechanisms]
Probab=92.92 E-value=0.21 Score=55.60 Aligned_cols=84 Identities=21% Similarity=0.297 Sum_probs=67.4
Q ss_pred eeeccccCCCCCCccCcEEEEeeecCCccEEEEEEEeccCC----CCCCccEEEEEECCccC-CcceEEEccCCCCCccc
Q 007734 506 MKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMS----EKDDFGGQTCLPVSELK-QGIRAVPLHDRKGERYK 580 (591)
Q Consensus 506 k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~----~~dd~lGq~~ipL~sL~-~GyR~vpL~d~~g~~~~ 580 (591)
..+|.++.+..||.|-+.|.....+.+...|+|.|+|-+.. ...+|+|++..-++.+- ...+.++|.-+.++.-.
T Consensus 42 ~~rte~i~~~~~p~f~~~~~l~y~fE~vQ~l~~~~~~~~~~~~~l~~~dflg~~~c~l~~ivs~~~~~~~l~~~~~~~~~ 121 (529)
T KOG1327|consen 42 VGRTEVIRNVLNPFFTKKFLLQYRFEKVQLLRFEVYDIDSRTPDLSSADFLGTAECTLSQIVSSSGLTGPLLLKPGKNAG 121 (529)
T ss_pred ccceeeeeccCCccceeeechhheeeeeeeEEEEEeecCCccCCcchhcccceeeeehhhhhhhhhhhhhhhcccCccCC
Confidence 34889999999999999999888888888999999997643 34689999988888764 45567777777777777
Q ss_pred CeEEEEEEE
Q 007734 581 SVKLLMHFE 589 (591)
Q Consensus 581 ~asLlv~i~ 589 (591)
.+++.++.+
T Consensus 122 ~g~iti~ae 130 (529)
T KOG1327|consen 122 SGTITISAE 130 (529)
T ss_pred cccEEEEee
Confidence 778887765
No 192
>KOG3837 consensus Uncharacterized conserved protein, contains DM14 and C2 domains [General function prediction only]
Probab=92.80 E-value=0.13 Score=54.94 Aligned_cols=121 Identities=17% Similarity=0.205 Sum_probs=85.0
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeec-CC----c---
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-PE----L--- 533 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~-pe----l--- 533 (591)
..|.+.|.+|++.+...... -.|.||+++..-.-....+.||.+++++-.|.|+|.|...+.. +. .
T Consensus 367 ~elel~ivrg~~~pvp~gp~------hld~fvr~efpl~nD~~qk~kt~vik~t~SPdfde~fklni~rg~~~nr~fqR~ 440 (523)
T KOG3837|consen 367 QELELAIVRGQKNPVPGGPM------HLDQFVRLEFPLENDSRQKLKTDVIKVTPSPDFDEDFKLNIRRGPGLNREFQRR 440 (523)
T ss_pred hHhHHHHhhcccCCCCCCch------hHHhhhcccccccccccccCccceeeCCCCCCcccceeeeccCCCcccHHHHHH
Confidence 34667777887765421111 1356998887644333457789999999999999999988763 21 1
Q ss_pred ---cEEEEEEEeccCC-CCCCccEEEEEECCccCCc---ceEEEccCCCCCcccCeEEEEEEEE
Q 007734 534 ---ALLRIEVHEYDMS-EKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 534 ---a~Lrf~V~D~d~~-~~dd~lGq~~ipL~sL~~G---yR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
--++|.++....+ ..|.++|.+.+.|.-|..- ..+++|+| |...-++.|.|++.+
T Consensus 441 fkr~g~kfeifhkggf~rSdkl~gt~nikle~Len~cei~e~~~l~D--GRK~vGGkLevKvRi 502 (523)
T KOG3837|consen 441 FKRLGKKFEIFHKGGFNRSDKLTGTGNIKLEILENMCEICEYLPLKD--GRKAVGGKLEVKVRI 502 (523)
T ss_pred HHhcCeeEEEeeccccccccceeceeeeeehhhhcccchhhceeccc--cccccCCeeEEEEEE
Confidence 2388999987654 4577999999998887654 34689975 555567788888754
No 193
>cd08574 GDPD_GDE_2_3_6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2, GDE3, GDE6-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase domain-containing protein subtype 5 (GDE2), subtype 2 (GDE3), subtype 1 (GDE6), and their eukaryotic homologs. Mammalian GDE2, GDE3, and GDE6 show very high sequence similarity to each other and have been classified into the same family. Although they are all transmembrane proteins, based on different pattern of tissue distribution, these enzymes might display diverse cellular functions. Mammalian GDE2 is primarily expressed in mature neurons. It selectively hydrolyzes glycerophosphocholine (GPC) and mainly functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differentiation in the spinal cord. Mammalian GDE3 is specifically expressed in bo
Probab=92.57 E-value=0.13 Score=52.45 Aligned_cols=41 Identities=20% Similarity=0.228 Sum_probs=35.0
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
.-+-|..+|..|+..||..||+||+=-.| +.|||.|-.||.
T Consensus 14 aPENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVV~HD~~l~ 54 (252)
T cd08574 14 APENTLMSFEKALEHGVYGLETDVTISYD-GVPFLMHDRTLR 54 (252)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEEeEccC-CcEEEeCCCccc
Confidence 34778999999999999999999996555 469999998873
No 194
>cd08601 GDPD_SaGlpQ_like Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=92.21 E-value=0.17 Score=51.62 Aligned_cols=41 Identities=20% Similarity=0.192 Sum_probs=35.3
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
.-+-|..++..|+..||..||+|||=-.| +.|||.|-.||.
T Consensus 13 ~pENT~~af~~A~~~G~d~vE~DV~lTkD-g~~Vv~HD~~l~ 53 (256)
T cd08601 13 APEHTFAAYDLAREMGADYIELDLQMTKD-GVLVAMHDETLD 53 (256)
T ss_pred CCCchHHHHHHHHHcCCCEEEEEeeECCC-CeEEEeCCCccc
Confidence 35889999999999999999999996555 469999998873
No 195
>PRK11143 glpQ glycerophosphodiester phosphodiesterase; Provisional
Probab=91.91 E-value=0.21 Score=53.73 Aligned_cols=42 Identities=19% Similarity=0.199 Sum_probs=35.8
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
+.=+.|.++|..|+..|+.-||+|||=-.| +.|||.|..+|.
T Consensus 38 ~~PENTl~Af~~A~~~GaD~IE~DV~lTkD-g~lVv~HD~~l~ 79 (355)
T PRK11143 38 YLPEHTLPAKAMAYAQGADYLEQDLVMTKD-DQLVVLHDHYLD 79 (355)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEccC-CcEEEeCCchhc
Confidence 345889999999999999999999996555 469999998764
No 196
>cd08580 GDPD_Rv2277c_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated.
Probab=91.81 E-value=0.23 Score=51.10 Aligned_cols=42 Identities=14% Similarity=0.126 Sum_probs=35.1
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
+.-+-|..+|..|+..||..||+||+=-.| +.|||.|-.||.
T Consensus 12 ~~PENTl~Af~~A~~~G~d~iE~DV~lTkD-g~lVv~HD~~l~ 53 (263)
T cd08580 12 DAPENTLLAISKALANGADAIWLTVQLSKD-GVPVLYRPSDLK 53 (263)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEeEECCC-CCEEEeCCCchh
Confidence 445778999999999999999999995444 369999988763
No 197
>cd08581 GDPD_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=91.68 E-value=0.2 Score=50.38 Aligned_cols=40 Identities=23% Similarity=0.315 Sum_probs=34.7
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
-+-|..+|..|+..||..||+||+=-.| +.|||.|-.||.
T Consensus 12 PENTl~Af~~A~~~gad~iE~DV~lTkD-g~~Vv~HD~~l~ 51 (229)
T cd08581 12 PENTLVGFRAAVDAGARFVEFDVQLSAD-GVPVVFHDDTLL 51 (229)
T ss_pred CccHHHHHHHHHHcCCCEEEEeeeECCC-CcEEEECCCccc
Confidence 4778999999999999999999997555 469999998874
No 198
>cd08612 GDPD_GDE4 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function has not yet been elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests GDE4 may play some distinct role from other members of the GDE family.
Probab=91.64 E-value=0.21 Score=52.25 Aligned_cols=40 Identities=20% Similarity=0.273 Sum_probs=34.2
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
-+-|.+++..|+..||+.||+|+|=-.| +.|||.|=.|+.
T Consensus 40 PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVV~HD~~l~ 79 (300)
T cd08612 40 LENTMEAFEHAVKVGTDMLELDVHLTKD-GQVVVSHDENLL 79 (300)
T ss_pred CccHHHHHHHHHHcCCCEEEEEeeECcC-CeEEEECCcccc
Confidence 4778999999999999999999996444 479999988763
No 199
>cd08600 GDPD_EcGlpQ_like Glycerophosphodiester phosphodiesterase domain of Escherichia coli (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli periplasmic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), GlpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the E. coli glp operon codes for a periplasmic phosphodiesterase GlpQ, which is the prototype of this family. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GP
Probab=91.64 E-value=0.21 Score=52.85 Aligned_cols=42 Identities=17% Similarity=0.189 Sum_probs=35.7
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
+.-+.|.++|..|+..||..||+||+=-.| +.|||.|-.+|.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 53 (318)
T cd08600 12 YLPEHTLEAKALAYAQGADYLEQDVVLTKD-DKLVVIHDHYLD 53 (318)
T ss_pred CCCccHHHHHHHHHHcCCCEEEeeeeECcC-CcEEEeCCchhh
Confidence 455888999999999999999999996544 369999998873
No 200
>cd08695 C2_Dock-B C2 domains found in Dedicator Of CytoKinesis (Dock) class B proteins. Dock-B is one of 4 classes of Dock family proteins. The members here include: Dock3/MOCA (modifier of cell adhesion) and Dock4. Most of these members have been shown to be GEFs specific for Rac, although Dock4 has also been shown to interact indirectly with the Ras family GTPase Rap1, probably through Rap regulatory proteins. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-B members contain a SH3 domain upstream of the C2 domain and a proline-rich region downstream. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold int
Probab=91.59 E-value=0.74 Score=44.99 Aligned_cols=56 Identities=23% Similarity=0.418 Sum_probs=37.7
Q ss_pred ceeeeccccCCCCCCccCcEEEEeeecC--CccEEEEEEEeccCCCCC--CccEEEEEEC
Q 007734 504 TVMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSEKD--DFGGQTCLPV 559 (591)
Q Consensus 504 ~~k~kTkvi~nn~NPvWNEtf~F~v~~p--ela~Lrf~V~D~d~~~~d--d~lGq~~ipL 559 (591)
...++|-+...+-+|.|||++...+... +.+.|+|+++......+. ..+|-+.+||
T Consensus 52 ~se~~S~V~yH~~~P~W~EtiKi~lP~~~~~~~HL~FtfrH~S~~~k~~~~pfg~s~lpL 111 (189)
T cd08695 52 CSEYRSFVLYHNNSPRWNETIKLPIPIDKFRGSHLRFEFRHCSTKDKGEKKLFGFSFVPL 111 (189)
T ss_pred cceEEEEEEEcCCCCCCceeEEEecChhhCCCeeEEEEEEEeeeccCCCCCceEEEEEee
Confidence 3467888888888999999999887643 347899988775432211 3344444444
No 201
>cd08694 C2_Dock-A C2 domains found in Dedicator Of CytoKinesis (Dock) class A proteins. Dock-A is one of 4 classes of Dock family proteins. The members here include: Dock180/Dock1, Dock2, and Dock5. Most of these members have been shown to be GEFs specific for Rac. Dock5 has not been well characterized to date, but most likely also is a GEF specific for Rac. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-A members contain a proline-rich region and a SH3 domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=91.42 E-value=2.7 Score=41.26 Aligned_cols=68 Identities=16% Similarity=0.189 Sum_probs=49.3
Q ss_pred eeeeccccCCCCCCccCcEEEEeeecC--CccEEEEEEEeccCCC-C---CCccEEEEEECC-----ccCCcceEEEcc
Q 007734 505 VMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSE-K---DDFGGQTCLPVS-----ELKQGIRAVPLH 572 (591)
Q Consensus 505 ~k~kTkvi~nn~NPvWNEtf~F~v~~p--ela~Lrf~V~D~d~~~-~---dd~lGq~~ipL~-----sL~~GyR~vpL~ 572 (591)
..++|-+...+-+|.|+|++...+... +.+.|+|.++...... + ...+|-+.+||- -|+.|-+.++++
T Consensus 53 se~~S~V~Yh~~~P~W~EtIKl~lP~~~~~~~HL~FtfrH~S~~~~kd~~e~pfg~s~lpL~~~~gt~l~dG~H~L~vY 131 (196)
T cd08694 53 DEYKSVIYYQVDKPKWFETFKVAIPIEDFKSSHLRFTFKHRSSNEAKDKSEKPFALSFVKLMQENGTTLTDGEHDLIVY 131 (196)
T ss_pred eeEEEEEEeecCCCCCceeEEEecChhhCCCeEEEEEEEeeccccccCCCCCceEEEEEeeeccCCcEEccCCEEEEEE
Confidence 457788877788999999999887643 3578999997644221 1 246788888874 277888888776
No 202
>cd08607 GDPD_GDE5 Glycerophosphodiester phosphodiesterase domain of putative mammalian glycerophosphodiester phosphodiesterase GDE5 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative mammalian GDE5 and similar proteins. Mammalian GDE5 is widely expressed in mammalian tissues, with highest expression in the spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. In addition to C-terminal GDPD domain, all members in this subfamily have a starch binding domain (CBM20) in the N-terminus, which suggests these proteins may play a distinct role in glycerol metabolism.
Probab=91.32 E-value=0.25 Score=51.26 Aligned_cols=49 Identities=16% Similarity=0.238 Sum_probs=39.1
Q ss_pred cccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccc
Q 007734 127 YLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (591)
Q Consensus 127 YL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts 176 (591)
|+.+.-..-+-+..+|..|+..|+..||+||+=-.| +.|||+|=.|+..
T Consensus 12 ~~~~~~~~PENTl~af~~A~~~Gad~iE~DV~lTkD-g~~VV~HD~~l~r 60 (290)
T cd08607 12 YTAASAVVRENTIASFLQAAEHGADMVEFDVQLTKD-LVPVVYHDFTLRV 60 (290)
T ss_pred cccccCCCCccHHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEcCCeeEe
Confidence 454444556889999999999999999999996444 4699999888743
No 203
>cd08571 GDPD_SHV3_plant Glycerophosphodiester phosphodiesterase domain of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase (GDPD) domain present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserv
Probab=90.75 E-value=0.25 Score=51.86 Aligned_cols=41 Identities=17% Similarity=0.247 Sum_probs=34.9
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
.-+-+..+|..|+..|+..||+|++=-.| +.+||.|-.+|.
T Consensus 13 ~PENTl~Af~~A~~~Gad~IE~DV~lTkD-g~lVv~HD~~l~ 53 (302)
T cd08571 13 YPDSTDLAYQKAISDGADVLDCDVQLTKD-GVPICLPSINLD 53 (302)
T ss_pred CCcchHHHHHHHHHcCCCEEEeeeeEcCC-CcEEEeCCchhc
Confidence 34778999999999999999999996555 369999998874
No 204
>cd08605 GDPD_GDE5_like_1_plant Glycerophosphodiester phosphodiesterase domain of uncharacterized plant glycerophosphodiester phosphodiesterase-like proteins similar to mammalian GDE5. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized plant glycerophosphodiester phosphodiesterase (GP-PDE)-like proteins. Members in this family show very high sequence homology to mammalian glycerophosphodiester phosphodiesterase GDE5 and are distantly related to plant GP-PDEs.
Probab=90.65 E-value=0.27 Score=50.84 Aligned_cols=38 Identities=16% Similarity=0.207 Sum_probs=33.6
Q ss_pred CCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 136 ~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
+-+..++..|+..||..||+|||=-.| +.|||+|=.||
T Consensus 25 ENTl~Af~~A~~~Gad~vE~DV~lTkD-g~~VV~HD~~l 62 (282)
T cd08605 25 ENTIASFIAASKFGADFVEFDVQVTRD-GVPVIWHDDFI 62 (282)
T ss_pred CcHHHHHHHHHHcCCCEEEEEEEECcC-CeEEEECCCce
Confidence 678999999999999999999996544 46999999888
No 205
>cd08559 GDPD_periplasmic_GlpQ_like Periplasmic glycerophosphodiester phosphodiesterase domain (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in bacterial and eukaryotic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ. GP-GDEs are involved in glycerol metabolism and catalyze the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. In E. coli, there are two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the glp operon codes for a periplasmic phosphodiesterase GlpQ. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI),
Probab=90.59 E-value=0.26 Score=51.51 Aligned_cols=41 Identities=17% Similarity=0.169 Sum_probs=34.9
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
.-+.|..+|..|+..||..||+||+=-.| +.|||.|-.+|-
T Consensus 13 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 53 (296)
T cd08559 13 APEHTLAAYALAIEMGADYIEQDLVMTKD-GVLVARHDPTLD 53 (296)
T ss_pred CccchHHHHHHHHHhCCCEEEEeeEEccC-CCEEEeccchhh
Confidence 34788999999999999999999996555 469999987763
No 206
>cd08609 GDPD_GDE3 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE3 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE3 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 2 (GDPD2), Osteoblast differentiation promoting factor) and their metazoan homologs. Mammalian GDE3 is a transmembrane protein specifically expressed in bone tissues and spleen. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE3 has been characterized as glycerophosphoinositol inositolphosphodiesterase (EC 3.1.4.43) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate inositol 1-phosphate (Ins1P) and glycerol. Mammalia
Probab=90.35 E-value=0.31 Score=51.52 Aligned_cols=49 Identities=20% Similarity=0.300 Sum_probs=39.1
Q ss_pred cCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 123 GHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 123 SHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
.|.-| .-..-+.|..+|..|+..||..||+||+=-.| +.|||.|-.||.
T Consensus 31 AHRGa---s~~aPENTl~AF~~Ai~~GaD~IE~DV~lTkD-G~lVV~HD~tL~ 79 (315)
T cd08609 31 GHRGA---PMLAPENTLMSLRKSLECGVVVFETDVMVSKD-GVPFLMHDEGLL 79 (315)
T ss_pred ECCCC---CCCCCccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEeCCCccc
Confidence 66653 22335888999999999999999999996555 469999988764
No 207
>cd08606 GDPD_YPL110cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL110cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL110cp and other uncharacterized fungal homologs. The product of S. cerevisiae ORF YPL110c (GDE1), YPL110cp (Gde1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL110cp has been characterized as a cytoplasmic glycerophosphocholine (GPC)-specific phosphodiesterase that selectively hydrolyzes GPC, not glycerophosphoinositol (GPI), to generate choline and glycerolphosphate. YPL110cp has multi-domain architecture, including not only C-terminal GDPD, but also an SPX N-terminal domain along with several ankyrin repeats, which imp
Probab=90.05 E-value=0.3 Score=50.60 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=34.5
Q ss_pred CCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 136 ~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
+-+..+|..|+..||..||+||+=-.| +.|||+|-.|+.
T Consensus 24 ENTl~af~~A~~~g~d~vE~DV~lTkD-g~~VV~HD~~l~ 62 (286)
T cd08606 24 ENTVESFILAASLGASYVEVDVQLTKD-LVPVIYHDFLVS 62 (286)
T ss_pred cchHHHHHHHHHcCCCEEEEEEEEccC-CEEEEeCCCeec
Confidence 889999999999999999999996544 479999998875
No 208
>cd08570 GDPD_YPL206cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL206cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL206cp and uncharacterized hypothetical homologs existing in fungi. The product of S. cerevisiae ORF YPL206c (PGC1), YPL206cp (Pgc1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL206cp is an integral membrane protein with a single GDPD domain following by a short hydrophobic C-terminal tail that may function as a membrane anchor. This protein plays an essential role in the regulation of the cardiolipin (CL) biosynthetic pathway in yeast by removing the excess phosphatidylglycerol (PG) content of membranes via a phospholip
Probab=89.66 E-value=0.48 Score=47.59 Aligned_cols=41 Identities=17% Similarity=0.261 Sum_probs=34.9
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
.-+.|.++|..|+..|++.||+|+.=-.| +.|||.|-.++.
T Consensus 11 ~pENT~~af~~a~~~g~d~vE~Dv~lTkD-g~~vv~HD~~l~ 51 (234)
T cd08570 11 YPENTLLAFEKAVEAGADAIETDVHLTKD-GVVVISHDPNLK 51 (234)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeEccC-CcEEEeCCCccc
Confidence 45889999999999999999999995444 369999988764
No 209
>PTZ00268 glycosylphosphatidylinositol-specific phospholipase C; Provisional
Probab=89.51 E-value=3.9 Score=44.10 Aligned_cols=107 Identities=21% Similarity=0.279 Sum_probs=68.7
Q ss_pred HHHHHhCCCcEEEEEeecCC-CCCCceEeeCCcccccchHHHHHHHHhhhcccc--CCCceEEeeccC---CCHHHHHHH
Q 007734 142 IIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVA--SEYPVVITLEDH---LTPDLQAKV 215 (591)
Q Consensus 142 Y~~aL~~GCRcvElD~Wdg~-~~~~piv~HG~tlts~i~f~dvi~aI~~~AF~~--S~yPvILSlE~H---cs~~qQ~~m 215 (591)
..+=|..|+|-+.|=|=-.+ +.++-.++||.. .++|.||++.|+++.=.. ..=-|||.+-.. =....|.+.
T Consensus 90 I~eQL~~GVRYfDIRV~~~~~~~~~~~~~Hgl~---~~~~~dvL~dv~~FL~~h~~p~EvVILd~~hfy~~~~~~h~~~l 166 (380)
T PTZ00268 90 VRAQLDHGVRYLDLRVATNPEDANRLYISHTQI---SVPLADVLEDVKAFLNDPSSANEFIVLDFQHLYLTDDSDGKGKF 166 (380)
T ss_pred HHHHHhCCeEEEEEEecccCCCCCcEEEEecee---ceEHHHHHHHHHHHHhcCCCCCcEEEEEeecccCCCchHHHHHH
Confidence 45557889999888874322 223456677652 478999999999854332 234577777542 234555566
Q ss_pred HHHHHHHhhccccCCCCCCCCCCCChhhcc-----ccEEEecCCC
Q 007734 216 AEMVTQTLGEILFTPGSECLKEFPSPESLK-----RRIIISTKPP 255 (591)
Q Consensus 216 a~~l~~~~Gd~L~~~~~~~~~~lPSP~~Lk-----~KIlik~K~~ 255 (591)
.+.|+. |||+|. |+.... . -+.++|- .+|||-.+.+
T Consensus 167 l~~L~~-~~d~l~-p~~~~~-~-~TL~~LW~~~~~~rVIi~Y~~~ 207 (380)
T PTZ00268 167 FRELDR-LSDRFI-PVDVPL-T-TPLEILWRVSRRRRIFLVVASG 207 (380)
T ss_pred HHHHHH-hcCeec-CCcccc-c-CcHHHHHhcCCCcEEEEEEccc
Confidence 667776 999987 433322 2 3788887 6788877543
No 210
>cd08602 GDPD_ScGlpQ1_like Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively.
Probab=89.47 E-value=0.38 Score=50.71 Aligned_cols=43 Identities=14% Similarity=0.186 Sum_probs=36.3
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccc
Q 007734 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts 176 (591)
+.-+.+..+|..|+..||..||+||+=-.| +.|||.|-.+|..
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DVqlTkD-g~lVv~HD~~l~r 54 (309)
T cd08602 12 YRPEHTLAAYQLAIEQGADFIEPDLVSTKD-GVLICRHEPELSG 54 (309)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEeeeECCC-CcEEEeCCCcccc
Confidence 445889999999999999999999996555 4799999988643
No 211
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=89.35 E-value=1.7 Score=37.47 Aligned_cols=63 Identities=13% Similarity=0.335 Sum_probs=45.7
Q ss_pred HHHHHHHHhhCC-CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYSEN-GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
-|..+|.+||++ ..|+..+|+..|..+=.. ...+.+.+..|+...-. .+.+.++|.+|..++.
T Consensus 9 ~lI~~FhkYaG~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~------n~Dg~vdF~EF~~Lv~ 75 (91)
T cd05024 9 KMMLTFHKFAGEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDD------CRDGKVGFQSFFSLIA 75 (91)
T ss_pred HHHHHHHHHcCCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCC------CCCCcCcHHHHHHHHH
Confidence 477899999977 899999999998764321 11245667777776532 2346899999998875
No 212
>PRK09454 ugpQ cytoplasmic glycerophosphodiester phosphodiesterase; Provisional
Probab=89.23 E-value=0.37 Score=48.98 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=35.1
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
.-+-|.+++..|+..|+..||+||.=-.| +.|||.|=.||.
T Consensus 20 ~pENT~~Af~~A~~~G~d~vE~DV~lT~D-g~lVV~HD~~l~ 60 (249)
T PRK09454 20 APENTLAAIDVGARYGHRMIEFDAKLSAD-GEIFLLHDDTLE 60 (249)
T ss_pred CChHHHHHHHHHHHcCCCEEEEEeeECCC-CCEEEECCCccc
Confidence 45778999999999999999999996555 469999988874
No 213
>smart00142 PI3K_C2 Phosphoinositide 3-kinase, region postulated to contain C2 domain. Outlier of C2 family.
Probab=89.10 E-value=2.1 Score=37.33 Aligned_cols=56 Identities=21% Similarity=0.215 Sum_probs=36.8
Q ss_pred CCceEEEEEeccCCCc-eeeeccccCCCCCCccCcEEEEeeecCC---ccEEEEEEEecc
Q 007734 489 PDFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRIEVHEYD 544 (591)
Q Consensus 489 ~DpyV~V~i~g~p~d~-~k~kTkvi~nn~NPvWNEtf~F~v~~pe---la~Lrf~V~D~d 544 (591)
.+.||++.+......- ....|+.+.-...+.|||-.+|++...+ .|.|.|+||+..
T Consensus 32 ~~l~v~~~l~~g~~~l~~pv~t~~~~~~~~~~Wnewl~f~i~i~~LPr~a~L~~~i~~~~ 91 (100)
T smart00142 32 SDLYVEIQLYHGGKLLCLPVSTSYKPFFPSVKWNEWLTFPIQISDLPREARLCITIYEVK 91 (100)
T ss_pred ceEEEEEEEEECCEEccCcEEecccCCCCCcccceeEEccCchhcCChhhEEEEEEEEee
Confidence 4779999887422111 1224544433345899999999887544 489999999854
No 214
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=88.47 E-value=1.4 Score=37.45 Aligned_cols=62 Identities=18% Similarity=0.302 Sum_probs=46.7
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcCCCCCC----HHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQKEDKAS----KEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~~~----~~~~~~~~~~Fl~~~Q~~~~~~----~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.|..+|.+|+.. ..|+.++|+..|...-++ ..+ .+++..++..+-. .+.+.++++.|..++.
T Consensus 9 ~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~-~~t~~~~~~~v~~i~~~~D~------d~dG~I~f~eF~~~~~ 78 (88)
T cd05030 9 TIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPN-FLKKEKNQKAIDKIFEDLDT------NQDGQLSFEEFLVLVI 78 (88)
T ss_pred HHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhH-hhccCCCHHHHHHHHHHcCC------CCCCcCcHHHHHHHHH
Confidence 477899999943 689999999999754333 244 6788888887642 1246899999999876
No 215
>cd08583 PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=88.24 E-value=0.58 Score=47.05 Aligned_cols=39 Identities=23% Similarity=0.134 Sum_probs=34.0
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcc
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tl 174 (591)
-+-|..++..|+..|++-||+|++=-.| +.+||.|-.|+
T Consensus 14 pENTl~Af~~A~~~G~d~iE~DV~lTkD-g~lVv~HD~~~ 52 (237)
T cd08583 14 YTNSLDAFEHNYKKGYRVFEVDLSLTSD-GVLVARHSWDE 52 (237)
T ss_pred CccHHHHHHHHHHhCCCEEEEEeeEccC-CCEEEEECCcC
Confidence 4788999999999999999999996555 46999998876
No 216
>PF14429 DOCK-C2: C2 domain in Dock180 and Zizimin proteins; PDB: 3L4C_A.
Probab=88.09 E-value=1.6 Score=42.31 Aligned_cols=67 Identities=18% Similarity=0.229 Sum_probs=37.1
Q ss_pred eeeccccCCCCCCccCcEEEEeeecC--CccEEEEEEEeccCCCCC---CccEEEEEECCc----cCCcceEEEcc
Q 007734 506 MKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSEKD---DFGGQTCLPVSE----LKQGIRAVPLH 572 (591)
Q Consensus 506 k~kTkvi~nn~NPvWNEtf~F~v~~p--ela~Lrf~V~D~d~~~~d---d~lGq~~ipL~s----L~~GyR~vpL~ 572 (591)
...|.+...+-+|.|+|+|..++..+ +.+.|.|++++.....+. ..+|-+.+||-. +..|...+|++
T Consensus 60 ~~~S~v~yh~k~P~f~deiKi~LP~~l~~~~HLlFtf~h~s~~~~~~~~~~~g~a~lpL~~~g~~i~dg~~~L~v~ 135 (184)
T PF14429_consen 60 SYYSSVYYHNKNPQFNDEIKIQLPPDLFPKHHLLFTFYHVSCKESKEKSKPFGYAFLPLMDNGTIIQDGEHELPVY 135 (184)
T ss_dssp -EE----TT-SS-EEEEEEEEEE-CCCCTTEEEEEEEEE---SSSS-SS-EEEEEEEESB-TS-B--SEEEEEEEE
T ss_pred EEEEEEEecCCCCCccEEEEEEcCchhcccEEEEEEEEeeccccccCccceeEEEEEEeeeCCeEecCCCEEEEEE
Confidence 45677777788999999999887643 357899999986543211 467777777764 33455666664
No 217
>cd08604 GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 2 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play important an role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=87.89 E-value=0.61 Score=48.94 Aligned_cols=42 Identities=17% Similarity=0.246 Sum_probs=35.8
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
+.-+.|..+|..|+..||..||+|++=-.| +.+||.|=.+|.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVv~HD~~l~ 53 (300)
T cd08604 12 DYPGCTDLAYQKAVKDGADVIDCSVQMSKD-GVPFCLDSINLI 53 (300)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEcCC-CCEEEecccccc
Confidence 445889999999999999999999996555 469999988773
No 218
>KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis]
Probab=87.67 E-value=0.37 Score=56.72 Aligned_cols=85 Identities=21% Similarity=0.324 Sum_probs=62.2
Q ss_pred CCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEe-eec--------CCccEEEEEEEeccCCCCCCccEE
Q 007734 484 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSV--------PELALLRIEVHEYDMSEKDDFGGQ 554 (591)
Q Consensus 484 d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~-v~~--------pela~Lrf~V~D~d~~~~dd~lGq 554 (591)
+..+.+|||+.|...+ +.+.|-++.+++||.||.+..|. +.. ...-.+.|+|+|.|..+.++|.|.
T Consensus 222 dk~~~sdp~a~v~f~~-----qs~~T~~v~~tl~ptwdq~~~f~~~ei~ge~~~~~~~ppi~v~e~yd~dr~g~~ef~gr 296 (1105)
T KOG1326|consen 222 DKDDESDPDAAVEFCG-----QSKETEVVPGTLNPTWDQTIIFDEVEIYGEAHLVLKNPPIRVFEVYDLDRSGINEFKGR 296 (1105)
T ss_pred CcccCCCchhhhhccc-----ccceeEeecCcCCCCccceeeccceeecCccchhhcCCCeEEEEeehhhhhchHHhhcc
Confidence 3345689999999887 56679999999999999999884 221 122468899999999999999997
Q ss_pred EEEECC-ccC-CcceEEEccC
Q 007734 555 TCLPVS-ELK-QGIRAVPLHD 573 (591)
Q Consensus 555 ~~ipL~-sL~-~GyR~vpL~d 573 (591)
...... -+. +-..|+|++.
T Consensus 297 ~~~~p~V~~~~p~lkw~p~~r 317 (1105)
T KOG1326|consen 297 KKQRPYVMVQCPALKWVPTMR 317 (1105)
T ss_pred cccceEEEecCCccceEEeec
Confidence 543322 223 3356788864
No 219
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=87.55 E-value=1.2 Score=33.74 Aligned_cols=50 Identities=14% Similarity=0.244 Sum_probs=40.0
Q ss_pred CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 38 GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 38 ~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
+.|+.++|+.+| ..++....+.+++..|+..+-.. +.+.+++++|..+|.
T Consensus 3 G~i~~~~~~~~l-~~~g~~~~s~~e~~~l~~~~D~~------~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 3 GKITREEFRRAL-SKLGIKDLSEEEVDRLFREFDTD------GDGYISFDEFISMMQ 52 (54)
T ss_dssp SEEEHHHHHHHH-HHTTSSSSCHHHHHHHHHHHTTS------SSSSEEHHHHHHHHH
T ss_pred CEECHHHHHHHH-HHhCCCCCCHHHHHHHHHhcccC------CCCCCCHHHHHHHHH
Confidence 578999999999 55665437899999999988632 347899999999885
No 220
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=87.52 E-value=1.8 Score=36.97 Aligned_cols=63 Identities=10% Similarity=0.224 Sum_probs=45.4
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcC---CCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQK---EDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~~~----~~~~~~~~~~Fl~~~Q~---~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
-|..+|.+|+.. .+|+.++|+.||..+-. ....+...+.+++..+-. -+.+.+++++|+.+|.
T Consensus 10 ~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~------d~DG~I~f~EF~~l~~ 79 (89)
T cd05023 10 SLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDL------NSDGQLDFQEFLNLIG 79 (89)
T ss_pred HHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCC------CCCCcCcHHHHHHHHH
Confidence 467889998832 38999999999998631 112355678888876532 1346899999998876
No 221
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=87.14 E-value=2.8 Score=35.91 Aligned_cols=63 Identities=13% Similarity=0.266 Sum_probs=46.5
Q ss_pred HHHHHHHHhhC--C-C-CcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYSE--N-G-TMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~~--~-~-~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
++..+|+.|.. + + .|+.++|+..|..+.++ ...+.+.+.+|+..+-. -+.+.+++++|..+|.
T Consensus 11 ~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~------n~dG~Idf~EF~~l~~ 80 (93)
T cd05026 11 TLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDS------NKDNEVDFNEFVVLVA 80 (93)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCC------CCCCCCCHHHHHHHHH
Confidence 57778999993 3 4 59999999999875432 12356788888888642 1246799999999876
No 222
>PF15627 CEP76-C2: CEP76 C2 domain
Probab=86.83 E-value=10 Score=35.99 Aligned_cols=126 Identities=19% Similarity=0.186 Sum_probs=81.6
Q ss_pred CCceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCC------
Q 007734 459 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE------ 532 (591)
Q Consensus 459 p~~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pe------ 532 (591)
|.+..|.++|+.|+-...-. .+.-+..+..+.+.++= ..++++|+.+.-..+|.|+|.|-|++....
T Consensus 6 ~~~~yL~l~vlgGkAFld~l----~~~~~~~~s~~~l~l~f---~~QRF~S~~Vp~~~eP~f~e~Flf~l~~~~~~~~~~ 78 (156)
T PF15627_consen 6 PGRRYLHLRVLGGKAFLDHL----QEPEGQVCSTFTLHLHF---RGQRFRSKPVPCACEPDFNEEFLFELPRDSFGAGST 78 (156)
T ss_pred CCceEEEEEEeCchhHhhhh----hccCCCCceEEEEEEEe---cCceEecCCcccccCCCCCCcEEEEecccccccccc
Confidence 34567999999987542100 00002233344444431 137899999999999999999999886442
Q ss_pred -c------cEEEEEEEeccCCCCCCccEEEEEECCc-cCCcce----EEEccCCCCC-cccCeEEEEEEEEC
Q 007734 533 -L------ALLRIEVHEYDMSEKDDFGGQTCLPVSE-LKQGIR----AVPLHDRKGE-RYKSVKLLMHFEFI 591 (591)
Q Consensus 533 -l------a~Lrf~V~D~d~~~~dd~lGq~~ipL~s-L~~GyR----~vpL~d~~g~-~~~~asLlv~i~f~ 591 (591)
. .-|.+.|--.|..+...++|...+.-.. |..|+. .|.|+...++ .++-+-|-++++++
T Consensus 79 ~~~lls~~~pihivli~~d~~~~~~Lv~s~~ldWR~vL~s~~~~~~~~vEL~G~~~e~kv~~GiL~l~lELl 150 (156)
T PF15627_consen 79 ATTLLSISDPIHIVLIRTDPSGETTLVGSHFLDWRKVLCSGNGSTSFTVELCGVGPESKVPVGILDLRLELL 150 (156)
T ss_pred hhHhhcCCCceEEEEEEecCCCceEeeeeceehHHHHhccCCCccceeEEEeccCCCCccceeEEEEEEEee
Confidence 1 1366666666655556788888887665 456764 4677765555 35556788888863
No 223
>cd08572 GDPD_GDE5_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. GDE5 is widely expressed in mammalian tissues, with highest expression in spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=86.73 E-value=0.79 Score=47.88 Aligned_cols=42 Identities=14% Similarity=0.181 Sum_probs=35.5
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
..-+.+..+|..|+..||.-||+||+=-.| +.|||+|=.++.
T Consensus 19 ~~pENTl~Af~~A~~~Gad~vE~DV~lTkD-G~lVv~HD~~l~ 60 (293)
T cd08572 19 GIRENTIASFLAAAKHGADMVEFDVQLTKD-GVPVIYHDFTIS 60 (293)
T ss_pred CcCcccHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEcCCcce
Confidence 345789999999999999999999996555 479999987764
No 224
>cd08679 C2_DOCK180_related C2 domains found in Dedicator Of CytoKinesis 1 (DOCK 180) and related proteins. Dock180 was first identified as an 180kd proto-oncogene product c-Crk-interacting protein involved in actin cytoskeletal changes. It is now known that it has Rac-specific GEF activity, but lacks the conventional Dbl homology (DH) domain. There are 10 additional related proteins that can be divided into four classes based on sequence similarity and domain organization: Dock-A which includes Dock180/Dock1, Dock2, and Dock5; Dock-B which includes Dock3/MOCA (modifier of cell adhesion) and Dock4; Dock-C which includes Dock6/Zir1, Dock7/Zir2, and Dock8/Zir3; and Dock-D, which includes Dock9/Zizimin1, Dock10/Zizimin3, and Dock11/Zizimin2/ACG (activated Cdc42-associated GEF). Most of members of classes Dock-A and Dock-B are the GEFs specific for Rac. Those of Dock-D are Cdc42-specific GEFs while those of Dock-C are the GEFs for both. All Dock180-related proteins have two common homolo
Probab=86.72 E-value=1.8 Score=41.79 Aligned_cols=67 Identities=18% Similarity=0.249 Sum_probs=47.6
Q ss_pred ccccCCCCCCccCcEEEEeeecC--CccEEEEEEEeccCCC-----CCCccEEEEEECCc-----cCCcceEEEccCCC
Q 007734 509 TKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSE-----KDDFGGQTCLPVSE-----LKQGIRAVPLHDRK 575 (591)
Q Consensus 509 Tkvi~nn~NPvWNEtf~F~v~~p--ela~Lrf~V~D~d~~~-----~dd~lGq~~ipL~s-----L~~GyR~vpL~d~~ 575 (591)
|.++..+-+|.|+|++...+... +...|.|++++.+... ....+|-+.+||-. |+.|...+|++-..
T Consensus 56 ~sv~~~~k~p~f~deiKi~LP~~l~~~~HLlFtf~hv~~~~~~~~~~~~~~g~a~lpL~~~~g~~i~dg~~~L~v~k~~ 134 (178)
T cd08679 56 TSVVYYHKNPVFNDEIKIQLPADLTPQHHLLFTFYHVSSKKKQGDKEETPFGYAFLPLMDKDGAFIKDGDHTLPVYKYD 134 (178)
T ss_pred EEEEEcCCCCCCceeEEEecCCccCCCeEEEEEEEccccccccCCCccceEEEEEEeccccCCcEEcCCCEEEEEEecC
Confidence 44444448999999999887533 3578999999866332 24578888888887 67788888876433
No 225
>PF10358 NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; InterPro: IPR019448 This entry represents the N-terminal 150 residues of a family of conserved proteins which are induced by oestrogen []. Proteins in this entry are usually annotated as Fam102A, Fam102B, or Eeig1 (early oestrogen-responsive gene product 1).
Probab=86.66 E-value=14 Score=33.67 Aligned_cols=115 Identities=20% Similarity=0.191 Sum_probs=68.4
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccC-CCCCCccCcEEEEeeec---C-----
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWNEEFEFPLSV---P----- 531 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~-nn~NPvWNEtf~F~v~~---p----- 531 (591)
+..+.|+|....+++. .+..|.|.............|.... .+..-.|||+|.+.+.. .
T Consensus 6 kf~~~l~i~~l~~~p~------------~~~~v~v~wkr~~~~~~~~~t~~~~~~~~~v~w~e~~~~~~tl~~~~k~~~~ 73 (143)
T PF10358_consen 6 KFQFDLTIHELENLPS------------SNGKVFVKWKRGDKSKGSGTTSRANVKNGKVQWNEEFSFPCTLYRDKKSKEF 73 (143)
T ss_pred eEEEEEEEEEeECcCC------------CCCEEEEEEEECCCCccceeeeeeeccccEEEEeeEEEEEEEEEEcCCCCcE
Confidence 3457777777777642 1123444443321111123444332 34567899999997653 1
Q ss_pred CccEEEEEEEeccCCCCCCccEEEEEECCccCCc-----ceEEEccCCCCCcccCeEEEEEEEE
Q 007734 532 ELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG-----IRAVPLHDRKGERYKSVKLLMHFEF 590 (591)
Q Consensus 532 ela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~G-----yR~vpL~d~~g~~~~~asLlv~i~f 590 (591)
+--.+.|.|+.....++...+|.+.|.|.....- .+.++|... +-..|+|.|.|.+
T Consensus 74 ~~K~~~~~v~~~~~~~~k~~lG~~~inLaey~~~~~~~~~~~~~l~~~---~~~~a~L~isi~~ 134 (143)
T PF10358_consen 74 QPKELKFSVFEVDGSGKKKVLGKVSINLAEYANEDEEPITVRLLLKKC---KKSNATLSISISL 134 (143)
T ss_pred eeEEEEEEEEEecCCCccceEEEEEEEHHHhhCcCCCcEEEEEeCccC---CCCCcEEEEEEEE
Confidence 1236889998875334335899999999987542 245677655 4456788887765
No 226
>cd08610 GDPD_GDE6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE6 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 4 (GDPD4)) and their metazoan homologs. Mammalian GDE6 is a transmembrane protein predominantly expressed in the spermatocytes of testis. Although the specific physiological function of mammalian GDE6 has not been elucidated, its different pattern of tissue distribution suggests it might play a critical role in the completion of meiosis during male germ cell differentiation.
Probab=86.36 E-value=0.83 Score=48.33 Aligned_cols=43 Identities=16% Similarity=0.207 Sum_probs=36.2
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccc
Q 007734 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts 176 (591)
..-+-|..+|..|+..||.-||+||+=-.| +.|||.|=.||..
T Consensus 34 ~aPENTl~AF~~A~~~Gad~IE~DV~lTkD-G~lVV~HD~tL~R 76 (316)
T cd08610 34 LAPENTMMSFEKAIEHGAHGLETDVTLSYD-GVPFLMHDFTLKR 76 (316)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEEEEccC-CCEEEeCCCcccc
Confidence 445888999999999999999999996555 4699999888743
No 227
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=86.26 E-value=2.4 Score=36.26 Aligned_cols=63 Identities=17% Similarity=0.238 Sum_probs=48.7
Q ss_pred HHHHHHHHhhC-C--CCcCHHHHHHHHHHHcCCCCCCH-HHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 26 AVKSMFDQYSE-N--GTMTVDHLHRFLIEVQKEDKASK-EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 26 ei~~if~~~~~-~--~~~~~~~~~~Fl~~~Q~~~~~~~-~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
.|..+|..|.. + ++|+..+|+..|..+=++ .++. +++.++|...-. -..+.+++++|..+|.+
T Consensus 9 ~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~-~ls~~~~v~~mi~~~D~------d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 9 TLVSNFHKASVKGGKESLTASEFQELLTQQLPH-LLKDVEGLEEKMKNLDV------NQDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhh-hccCHHHHHHHHHHhCC------CCCCCCcHHHHHHHHHH
Confidence 57889999987 4 899999999999975344 3566 788888876541 13478999999998863
No 228
>KOG1327 consensus Copine [Signal transduction mechanisms]
Probab=84.78 E-value=1.3 Score=49.40 Aligned_cols=82 Identities=22% Similarity=0.331 Sum_probs=58.5
Q ss_pred cCCCCCCCceEEEEEe-ccCCCceeeeccccCCCCCCccCcE-EEEe-eecCC-ccEEEEEEEeccCCCCCCccEEEEEE
Q 007734 483 FDAYSPPDFYARVGIA-GVPADTVMKKTKTLEDNWIPSWNEE-FEFP-LSVPE-LALLRIEVHEYDMSEKDDFGGQTCLP 558 (591)
Q Consensus 483 ~d~~~~~DpyV~V~i~-g~p~d~~k~kTkvi~nn~NPvWNEt-f~F~-v~~pe-la~Lrf~V~D~d~~~~dd~lGq~~ip 558 (591)
.+.++..|||..+.-. +.......++|.++++++||.|-+. .... +...+ -..+.+.+||++..++++++|++.-+
T Consensus 151 kd~f~ksd~~l~~~~~~~d~s~~~~~~tEv~~n~l~p~w~~~~i~~~~l~~~~~~~~~~i~~~d~~~~~~~~~ig~~~tt 230 (529)
T KOG1327|consen 151 KDFFSKSDPYLEFYKRVDDGSTQMLYRTEVVKNTLNPQWAPFSISLQSLCSKDGNRPIQIECYDYDSNGKHDLIGKFQTT 230 (529)
T ss_pred ccccccCCcceEEEEecCCCceeeccccceeccCCCCcccccccchhhhcccCCCCceEEEEeccCCCCCcCceeEeccc
Confidence 3667889999776543 2222233569999999999999853 2221 22222 35688999999988878999999999
Q ss_pred CCccCC
Q 007734 559 VSELKQ 564 (591)
Q Consensus 559 L~sL~~ 564 (591)
+..++.
T Consensus 231 ~~~~~~ 236 (529)
T KOG1327|consen 231 LSELQE 236 (529)
T ss_pred HHHhcc
Confidence 998864
No 229
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=83.40 E-value=4 Score=34.64 Aligned_cols=64 Identities=13% Similarity=0.239 Sum_probs=47.9
Q ss_pred hHHHHHHHHhh-CC--C-CcCHHHHHHHHHHHcCCC---CCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 25 DAVKSMFDQYS-EN--G-TMTVDHLHRFLIEVQKED---KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 25 ~ei~~if~~~~-~~--~-~~~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.+|.++|..|. .+ . .|+.++|+..|+..-+.. ..+.+.+.+|+..+... +.+.++++.|..++.
T Consensus 9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d------~~G~I~f~eF~~l~~ 79 (92)
T cd05025 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDEN------GDGEVDFQEFVVLVA 79 (92)
T ss_pred HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCC------CCCcCcHHHHHHHHH
Confidence 57889999996 43 6 499999999998643331 24678899999887521 246799999998876
No 230
>cd08578 GDPD_NUC-2_fungi Putative glycerophosphodiester phosphodiesterase domain of ankyrin repeat protein NUC-2 and similar proteins. This subfamily corresponds to a putative glycerophosphodiester phosphodiesterase domain (GDPD) present in Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81. Some uncharecaterized NUC-2 sequence homologs are also included in this family. NUC-2 plays an important role in the phosphate-regulated signal transduction pathway in Neurospora crassa. It shows high similarity to a cyclin-dependent kinase inhibitory protein PHO81, which is part of the phosphate regulatory cascade in S. cerevisiae. Both NUC-2 and PHO81 have multi-domain architecture, including an SPX N-terminal domain following by several ankyrin repeats and a putative C-terminal GDPD domain with unknown function. Although the putative GDPD domain displays sequence homology to that of bacterial glycerophos
Probab=83.31 E-value=1.5 Score=46.11 Aligned_cols=52 Identities=8% Similarity=-0.019 Sum_probs=38.3
Q ss_pred eeeeccCcccccCCCCCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccc
Q 007734 118 YFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (591)
Q Consensus 118 YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts 176 (591)
||=|+|-.. ..+. ++...++.|...|++-||+||+=-.| +.|||+|-+++..
T Consensus 3 YWKst~~~~---~~~~---~~~~sfvtAsslgad~VE~DVqLTkD-gvpVV~HD~~i~~ 54 (300)
T cd08578 3 YWKSTSGSD---TQAN---KDGNSFVTASSLSGEYLRVKVCVLKD-GTPVVAPEWFVPV 54 (300)
T ss_pred ccccCCCcc---cccC---CCchhHHHHHHcCCCEEEEEEEECcC-CEEEEECCCceEe
Confidence 777766521 1111 46789999999999999999995444 3699999988743
No 231
>COG0584 UgpQ Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=83.09 E-value=1.3 Score=44.99 Aligned_cols=37 Identities=22% Similarity=0.261 Sum_probs=32.4
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCC
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGG 172 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~ 172 (591)
-+-+.++|..|+..|+.+||+|+.--.| +.+||+|=+
T Consensus 19 PENTl~Af~~A~~~gad~iE~Dv~lTkD-g~lVv~HD~ 55 (257)
T COG0584 19 PENTLAAFELAAEQGADYIELDVQLTKD-GVLVVIHDE 55 (257)
T ss_pred CcchHHHHHHHHHcCCCEEEeeccCccC-CcEEEeccc
Confidence 3778999999999999999999997655 469999977
No 232
>cd08560 GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodiesterase domain similar to Escherichia coli periplasmic phosphodiesterase (GlpQ) include uncharacterized proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and their hypothetical homologs. Members in this subfamily show high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=82.39 E-value=1.5 Score=47.28 Aligned_cols=40 Identities=13% Similarity=0.140 Sum_probs=33.8
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCC-cc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGG-TM 174 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~-tl 174 (591)
.-+-|.++|..|+..|+.-||+|++=-.| +.|||.|=. +|
T Consensus 29 ~PEnTl~Af~~Ai~~Gad~IE~DV~lTkD-g~lVV~HD~~~L 69 (356)
T cd08560 29 FPEHTRESYEAAARMGAGILECDVTFTKD-RELVCRHSQCDL 69 (356)
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCccc
Confidence 34788999999999999999999996555 469999985 44
No 233
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=82.38 E-value=6 Score=29.15 Aligned_cols=59 Identities=20% Similarity=0.438 Sum_probs=44.4
Q ss_pred HHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHh
Q 007734 27 VKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (591)
Q Consensus 27 i~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l 93 (591)
+..+|..|-.+ +.++.++|...++... . ..+.+.+..++.++... +.+.+++++|..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~-~-~~~~~~~~~~~~~~~~~------~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLG-E-GLSEEEIDEMIREVDKD------GDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHh
Confidence 56788888654 7899999999998643 3 35777788888887522 23579999999876
No 234
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=82.19 E-value=5.7 Score=34.00 Aligned_cols=61 Identities=15% Similarity=0.152 Sum_probs=46.4
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
..++..+|..+-.+ +.|+.++|..+|+.. ..+.+.+..|+..+... ..+.+++++|..+|.
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~----~~~~~ev~~i~~~~d~~------~~g~I~~~eF~~~~~ 71 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKS----GLPQTLLAKIWNLADID------NDGELDKDEFALAMH 71 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHc----CCCHHHHHHHHHHhcCC------CCCCcCHHHHHHHHH
Confidence 34677788888643 889999999999872 35778888888876421 246799999998876
No 235
>cd08585 GDPD_like_3 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity with Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=81.97 E-value=1.4 Score=44.64 Aligned_cols=39 Identities=26% Similarity=0.296 Sum_probs=32.9
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
-+-+..+|..|+..|+ -||+||+=-.| +.|||.|=.||.
T Consensus 20 pENTl~af~~A~~~G~-~iE~DV~lT~D-g~lVv~HD~~l~ 58 (237)
T cd08585 20 PENSLSAFRAAAEAGY-GIELDVQLTAD-GEVVVFHDDNLK 58 (237)
T ss_pred CccHHHHHHHHHHcCC-cEEEEeeECCC-CCEEEeccchHh
Confidence 4678899999999999 89999997555 479999987764
No 236
>cd08613 GDPD_GDE4_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial homologs of mammalian glycerophosphodiester phosphodiesterase GDE4. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial homologs of mammalian GDE4, a transmembrane protein whose cellular function has not been elucidated yet.
Probab=81.77 E-value=1.5 Score=46.17 Aligned_cols=39 Identities=26% Similarity=0.461 Sum_probs=33.9
Q ss_pred CCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 136 ~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
+-+.++|..|+..|+..||+||+--.| +.+||.|=.||.
T Consensus 60 ENTl~Af~~A~~~Gad~IE~DV~lTkD-g~lVV~HD~tL~ 98 (309)
T cd08613 60 ENTIASMQAAFDAGADVVELDVHPTKD-GEFAVFHDWTLD 98 (309)
T ss_pred chHHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEecCccc
Confidence 677899999999999999999997555 469999988873
No 237
>cd08608 GDPD_GDE2 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE2 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 5 (GDPD5)) and their metazoan homologs. Mammalian GDE2 is transmembrane protein primarily expressed in mature neurons. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE2 selectively hydrolyzes glycerophosphocholine (GPC) and has been characterized as GPC-GDE (EC 3.1.4.2) that contributes to osmotic regulation of cellular GPC. Mammalian GDE2 functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differenti
Probab=80.97 E-value=1.8 Score=46.46 Aligned_cols=41 Identities=15% Similarity=0.163 Sum_probs=34.5
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
.-+-+..+|..|+..||.-||+|++=-.| +.|||.|=.||.
T Consensus 14 aPENTL~AF~~A~~~GaD~IElDV~lTkD-GvlVV~HD~tL~ 54 (351)
T cd08608 14 APENTLMSFQKALEQKVYGLQADVTISLD-GVPFLMHDRTLR 54 (351)
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCccc
Confidence 34778999999999999999999996544 469999988774
No 238
>KOG2258 consensus Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=80.59 E-value=2.2 Score=45.65 Aligned_cols=40 Identities=25% Similarity=0.326 Sum_probs=35.0
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc
Q 007734 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt 175 (591)
-+.|..+|.+|...|+.|||+|+=...| +.+|+.|=-|..
T Consensus 82 penT~~A~~~a~~~Gad~ie~dV~~TsD-g~~v~l~d~~~~ 121 (341)
T KOG2258|consen 82 PENTLAAYKKAIADGADLIELDVQMTSD-GVPVILHDSTTV 121 (341)
T ss_pred CcccHHHHHHHHHcCCcEEEeccccCCC-CceEEeecCcce
Confidence 4678999999999999999999999887 568999976655
No 239
>PF05386 TEP1_N: TEP1 N-terminal domain; InterPro: IPR008850 Telomerase protein component 1 (TP1/TLP1) or TEP1 is a protein component of two ribonucleoprotein (RNP) complexes: vaults and telomerase. Vaults are large RNP particles with a barrel-like structure (IPR002499 from INTERPRO). The telomerase RNP replenishes incomplete chromosome termini due to DNA replication. Mammalian TEP1 is an RNA-binding protein and is required for the association of vault RNA with the vault particle [, ]. The N-terminal part of TEP1 contains 4 copies of the TEP1 N-terminal repeat in tandem. The repeat is composed of 30 amino acids and occurs in combination with the TROVE (IPR008858 from INTERPRO) and NACHT (IPR007111 from INTERPRO) domains and with WD-40 repeats (see IPR001680 from INTERPRO) in the C-terminal part.
Probab=79.77 E-value=0.41 Score=31.87 Aligned_cols=14 Identities=29% Similarity=0.503 Sum_probs=12.8
Q ss_pred cCCCceEEeeccCC
Q 007734 194 ASEYPVVITLEDHL 207 (591)
Q Consensus 194 ~S~yPvILSlE~Hc 207 (591)
.|.+|=||||||.|
T Consensus 8 ~sahpdILSLeNrC 21 (30)
T PF05386_consen 8 VSAHPDILSLENRC 21 (30)
T ss_pred ccCCcchhhhhhhH
Confidence 57899999999999
No 240
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=79.52 E-value=2.3 Score=31.46 Aligned_cols=27 Identities=19% Similarity=0.453 Sum_probs=23.2
Q ss_pred HHHHHHHHhh---CC-CCcCHHHHHHHHHHH
Q 007734 26 AVKSMFDQYS---EN-GTMTVDHLHRFLIEV 52 (591)
Q Consensus 26 ei~~if~~~~---~~-~~~~~~~~~~Fl~~~ 52 (591)
-|..+|.+|| ++ .+|++.+|+..|.++
T Consensus 7 ~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~E 37 (44)
T PF01023_consen 7 TIIDVFHKYAGKEGDKDTLSKKELKELLEKE 37 (44)
T ss_dssp HHHHHHHHHHTSSSSTTSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCeEcHHHHHHHHHHH
Confidence 4788999999 44 899999999999865
No 241
>PTZ00183 centrin; Provisional
Probab=77.67 E-value=8.9 Score=35.10 Aligned_cols=65 Identities=18% Similarity=0.395 Sum_probs=49.5
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 23 ~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
...++..+|..|-.+ +.++.++|..+|...+ . ..+.+.+..++..+... +.+.++++.|..++..
T Consensus 88 ~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~-~-~l~~~~~~~~~~~~d~~------~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 88 PREEILKAFRLFDDDKTGKISLKNLKRVAKELG-E-TITDEELQEMIDEADRN------GDGEISEEEFYRIMKK 154 (158)
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHhc
Confidence 346788899888643 7899999999998654 3 46888889998887622 2356999999998863
No 242
>PTZ00184 calmodulin; Provisional
Probab=77.29 E-value=8.7 Score=34.58 Aligned_cols=65 Identities=17% Similarity=0.383 Sum_probs=44.1
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 23 ~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
.+..+..+|..|-.+ +.|+.++|..+|..... ..+.+.+..++.++... ..+.+++++|..+|.+
T Consensus 82 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~--~~~~~~~~~~~~~~d~~------~~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 82 SEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGE--KLTDEEVDEMIREADVD------GDGQINYEEFVKMMMS 148 (149)
T ss_pred HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCC--CCCHHHHHHHHHhcCCC------CCCcCcHHHHHHHHhc
Confidence 345677788888533 77888888888876532 35667777777665421 2356889999888864
No 243
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=77.11 E-value=7 Score=30.53 Aligned_cols=63 Identities=17% Similarity=0.462 Sum_probs=41.3
Q ss_pred HHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHh
Q 007734 27 VKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (591)
Q Consensus 27 i~~if~~~~~-~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l 93 (591)
|.++|..|=. + +.|+.++|..++...... .+.+.+.+.++..-.. ...-+.+.+++++|..++
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~--~~~~~~~~~~~~~~~~--~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRD--MSDEESDEMIDQIFRE--FDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSH--STHHHHHHHHHHHHHH--HTTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhccc--ccHHHHHHHHHHHHHH--hCCCCcCCCcHHHHhccC
Confidence 6789999853 3 899999999999987654 2344444443332210 111235789999999875
No 244
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=74.88 E-value=13 Score=28.65 Aligned_cols=57 Identities=18% Similarity=0.202 Sum_probs=42.2
Q ss_pred HHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 28 KSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 28 ~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
..+|..+-.+ +.++.++|..+|... + .+.+.+..++..+... +.+.++++.|...+.
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~-g---~~~~~~~~i~~~~d~~------~~g~i~~~ef~~~~~ 60 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKS-G---LPRSVLAQIWDLADTD------KDGKLDKEEFAIAMH 60 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHc-C---CCHHHHHHHHHHhcCC------CCCcCCHHHHHHHHH
Confidence 3567777543 889999999999863 2 4777888888876521 236799999988764
No 245
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=74.65 E-value=14 Score=31.45 Aligned_cols=63 Identities=16% Similarity=0.311 Sum_probs=46.5
Q ss_pred HHHHHHHHhh-C-C-C-CcCHHHHHHHHHHHc---CCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYS-E-N-G-TMTVDHLHRFLIEVQ---KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~-~-~-~-~~~~~~~~~Fl~~~Q---~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
+|..+|..|. . + + .|+.++|+..|+.+= .....+.+++.++|...-. -+.+.++++.|..++.
T Consensus 9 ~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~------n~dG~v~f~eF~~li~ 78 (88)
T cd05027 9 ALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDS------DGDGECDFQEFMAFVA 78 (88)
T ss_pred HHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCC------CCCCcCcHHHHHHHHH
Confidence 6889999997 2 3 6 599999999998611 1113477889999887642 1346799999998875
No 246
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=70.85 E-value=19 Score=30.05 Aligned_cols=64 Identities=16% Similarity=0.285 Sum_probs=46.9
Q ss_pred hHHHHHHHHhhC--C--CCcCHHHHHHHHHHHcCCC---CCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 25 DAVKSMFDQYSE--N--GTMTVDHLHRFLIEVQKED---KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 25 ~ei~~if~~~~~--~--~~~~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.++..+|..|-. + +.|+.++|..+++..=+.. ..+...+..|+..+... +.+.+++++|+..|.
T Consensus 8 ~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~------~~g~I~f~eF~~~~~ 78 (88)
T cd00213 8 ETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVN------KDGKVDFQEFLVLIG 78 (88)
T ss_pred HHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccC------CCCcCcHHHHHHHHH
Confidence 467788999977 4 7899999999997521211 13577888888877521 246899999999886
No 247
>cd08603 GDPD_SHV3_repeat_1 Glycerophosphodiester phosphodiesterase domain repeat 1 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 1 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=70.35 E-value=5 Score=42.16 Aligned_cols=40 Identities=13% Similarity=-0.069 Sum_probs=33.8
Q ss_pred CCCChHHHHHHHhCCCc--EEEEEeecCCCCCCceEeeCCccc
Q 007734 135 SDCSDVPIIRALQKGVR--VIELDIWPNSKKDNVDVLHGGTMT 175 (591)
Q Consensus 135 g~Ss~e~Y~~aL~~GCR--cvElD~Wdg~~~~~piv~HG~tlt 175 (591)
-+.+.++|..|+..|+. -||+|++=-.| +.|||.|..+|.
T Consensus 14 PEnTl~Ay~~Ai~~Ga~~d~IE~DV~lTkD-gvlVv~HD~~L~ 55 (299)
T cd08603 14 PDSSLFAYQFAASSSSPDVALWCDLQLTKD-GVGICLPDLNLD 55 (299)
T ss_pred CcchHHHHHHHHHcCCCCCEEEEEeeECcC-CcEEEeCCcccc
Confidence 47889999999999995 69999996555 369999998874
No 248
>cd08697 C2_Dock-D C2 domains found in Dedicator Of CytoKinesis (Dock) class C proteins. Dock-D is one of 4 classes of Dock family proteins. The members here include: Dock9/Zizimin1, Dock10/Zizimin3, and Dock11/Zizimin2/ACG (activated Cdc42-associated GEF). Dock-D are Cdc42-specific GEFs. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-D members contain a functionally uncharacterized domain and a PH domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The PH domain broadly binds to phospholipids and is thought to be involved in targeting the plasma membrane. The C2 domain was first identified in PKC. C2 domains fold into an 8-stande
Probab=69.32 E-value=19 Score=35.17 Aligned_cols=68 Identities=19% Similarity=0.237 Sum_probs=44.7
Q ss_pred eeeeccccCCCCCCccCcEEEEeeec--CCccEEEEEEEeccCC--CC-------CCccEEEEEECCc----cCCcceEE
Q 007734 505 VMKKTKTLEDNWIPSWNEEFEFPLSV--PELALLRIEVHEYDMS--EK-------DDFGGQTCLPVSE----LKQGIRAV 569 (591)
Q Consensus 505 ~k~kTkvi~nn~NPvWNEtf~F~v~~--pela~Lrf~V~D~d~~--~~-------dd~lGq~~ipL~s----L~~GyR~v 569 (591)
....|.+...+-+|.|+|++...+.. .+...|+|+.++.+.. .+ ...+|-+.+||-. |..|...+
T Consensus 56 ~~~~s~V~yh~k~P~f~dEiKI~LP~~l~~~hHLlFtFyHvsc~~~~k~~~~~~~e~~~Gys~lPLl~~~~~l~~g~~~L 135 (185)
T cd08697 56 TSAYAAVLHHNQNPEFYDEIKIELPTQLHEKHHLLFTFYHVSCDINKKGKKKDGVETPVGYAWLPLLKDKGRLNSEEQTP 135 (185)
T ss_pred eEEEEEEEEcCCCCccceeEEEecCCcCCCCeeEEEEEEeeccccccccccCCCccceEEEEEEeeecCCCEEecCCEee
Confidence 45577888888899999998887643 3457899999986521 11 2346666677654 44555555
Q ss_pred Ecc
Q 007734 570 PLH 572 (591)
Q Consensus 570 pL~ 572 (591)
|..
T Consensus 136 pV~ 138 (185)
T cd08697 136 PVA 138 (185)
T ss_pred eEE
Confidence 443
No 249
>KOG0904 consensus Phosphatidylinositol 3-kinase catalytic subunit (p110) [Signal transduction mechanisms]
Probab=67.92 E-value=24 Score=41.77 Aligned_cols=101 Identities=15% Similarity=0.175 Sum_probs=57.0
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEE--Ee-ccCCCceeeeccccCCCCCCccCcEEEEeeecCC---ccE
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVG--IA-GVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LAL 535 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~--i~-g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pe---la~ 535 (591)
+.++|+++++...-.+ ...|.+|.|+ +. |...=+....|.-+...-+|.||+.++|++...+ .|.
T Consensus 343 ~~frI~l~~is~~n~~---------~t~~~kV~V~~~lyhG~e~Lc~~~sTs~v~~~~~~~Wn~~leFDI~i~DLPr~Ar 413 (1076)
T KOG0904|consen 343 RPFRIKLVGISKVNLP---------ETVDLKVFVEAGLYHGTEVLCKTRSTSEVPGCSFPLWNEWLEFDIYIKDLPRMAR 413 (1076)
T ss_pred CceEEEEeeccccCCC---------cccceEEEEEEEEEECCeehhcccccCCCCCccchhccceeEeeeecCCCChhhh
Confidence 3478888887755221 1123455444 33 2111112234444444568999999999987544 577
Q ss_pred EEEEEEecc----------------CCCCCCccEEEEEECC----ccCCcceEEEc
Q 007734 536 LRIEVHEYD----------------MSEKDDFGGQTCLPVS----ELKQGIRAVPL 571 (591)
Q Consensus 536 Lrf~V~D~d----------------~~~~dd~lGq~~ipL~----sL~~GyR~vpL 571 (591)
|.|.|+..- .....-.+|++.+-|- .|+.|-+.+.+
T Consensus 414 Lc~~i~~v~~~~~s~~~s~~~~~kk~k~~~~plaWvN~~lfD~kd~LrtG~~~Lh~ 469 (1076)
T KOG0904|consen 414 LCLAIYAVKAKAKSKKNSAESTKKKSKKEHCPLAWVNLMLFDHKDQLRTGEYVLHM 469 (1076)
T ss_pred heeeeeEeechhccccccchhhhhccccccCceEEEeeeeeechhhhhcCceEEEe
Confidence 888877541 1112335777766654 47888654433
No 250
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=67.16 E-value=22 Score=30.25 Aligned_cols=64 Identities=16% Similarity=0.341 Sum_probs=47.3
Q ss_pred hHHHHHHHHhhC---C-CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 25 DAVKSMFDQYSE---N-GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 25 ~ei~~if~~~~~---~-~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.++...|..|.. + +.|+.++|+..|+...+. ...+.+.+..++..+... +.+.++++.|..++.
T Consensus 8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~------~dg~I~f~eF~~l~~ 78 (94)
T cd05031 8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQN------RDGKVNFEEFVSLVA 78 (94)
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCC------CCCcCcHHHHHHHHH
Confidence 468889999964 3 689999999999863221 134677888888876421 246899999998876
No 251
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=66.22 E-value=12 Score=32.24 Aligned_cols=62 Identities=15% Similarity=0.281 Sum_probs=37.4
Q ss_pred HHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCC---------CCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhccC
Q 007734 27 VKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDK---------ASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGD 96 (591)
Q Consensus 27 i~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~~---------~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s~ 96 (591)
.+.+|..++.. +.|+...|..||++..+-+. ..+..+++.++.- ..+..++++.|+.+|+++
T Consensus 5 yRylFslisd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~--------~~~~~I~~~~Fl~wl~~e 76 (90)
T PF09069_consen 5 YRYLFSLISDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQV--------QLSPKITENQFLDWLMSE 76 (90)
T ss_dssp HHHHHHHHS-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHT--------TT-S-B-HHHHHHHHHT-
T ss_pred HHHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhccc--------CCCCccCHHHHHHHHHhC
Confidence 57899999876 89999999999998764321 1122233333321 024679999999999976
No 252
>cd08696 C2_Dock-C C2 domains found in Dedicator Of CytoKinesis (Dock) class C proteins. Dock-C is one of 4 classes of Dock family proteins. The members here include: Dock6/Zir1, Dock7/Zir2, and Dock8/Zir3. Dock-C members are GEFs for both Rac and Cdc42. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-C members contain a functionally uncharacterized domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strand
Probab=65.02 E-value=21 Score=34.69 Aligned_cols=56 Identities=20% Similarity=0.180 Sum_probs=38.7
Q ss_pred eeeeccccCCCCCCccCcEEEEeeec--CCccEEEEEEEeccCCCC------CCccEEEEEECC
Q 007734 505 VMKKTKTLEDNWIPSWNEEFEFPLSV--PELALLRIEVHEYDMSEK------DDFGGQTCLPVS 560 (591)
Q Consensus 505 ~k~kTkvi~nn~NPvWNEtf~F~v~~--pela~Lrf~V~D~d~~~~------dd~lGq~~ipL~ 560 (591)
....|.+...|-+|.|+|++...+.. .+...|+|+.++.+...+ ...+|-+.+||-
T Consensus 54 ~~~~S~V~yHnk~P~f~DEiKi~LP~~l~~~hHLlFtF~Hvs~~~k~~~~~~e~~~Gys~lPL~ 117 (179)
T cd08696 54 TEAYTAVTYHNKSPDFYDEIKIKLPADLTDNHHLLFTFYHISCQKKQEGGSVETPIGYTWLPLL 117 (179)
T ss_pred eeEEEEEEEeCCCCcccceEEEEcCCCCCCCeEEEEEEEEeeccccccCCCccceEEEEEEeee
Confidence 34578888888899999998887654 345789999998554321 134666666653
No 253
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=65.01 E-value=13 Score=35.17 Aligned_cols=62 Identities=16% Similarity=0.348 Sum_probs=46.1
Q ss_pred HHHHHHHhh----CC-CCcCHHHHHHHHHHHcCC-CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 27 VKSMFDQYS----EN-GTMTVDHLHRFLIEVQKE-DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 27 i~~if~~~~----~~-~~~~~~~~~~Fl~~~Q~~-~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
|+.+|..|+ .+ ..|+-..|.+++++.+=- ..++..++.-|+.++... ..+.|++++|...|.
T Consensus 1 L~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k------~~~~I~f~~F~~aL~ 68 (154)
T PF05517_consen 1 LEAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAK------GARKITFEQFLEALA 68 (154)
T ss_dssp HHHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-S------S-SEEEHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcC------CCcccCHHHHHHHHH
Confidence 567899994 33 889999999999988732 237889999999997621 123499999998886
No 254
>PF12416 DUF3668: Cep120 protein; InterPro: IPR022136 This domain family is found in eukaryotes, and is typically between 75 and 114 amino acids in length.
Probab=63.87 E-value=66 Score=34.51 Aligned_cols=99 Identities=12% Similarity=0.189 Sum_probs=69.1
Q ss_pred EEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecC-------CccEE
Q 007734 464 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP-------ELALL 536 (591)
Q Consensus 464 L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~p-------ela~L 536 (591)
+-|.|+.|.+.+.. + .-...|+..+.| ...-|-.+..+-.|.||..+.|.+..- +-.-|
T Consensus 2 ivl~i~egr~F~~~-~--------~~~~vv~a~~ng-----~~l~TDpv~~~~~p~f~teL~WE~Dr~~l~~~r~~~tPi 67 (340)
T PF12416_consen 2 IVLSILEGRNFPQR-P--------RHPIVVEAKFNG-----ESLETDPVPHTESPQFNTELAWECDRKALKQHRLQRTPI 67 (340)
T ss_pred EEEEEecccCCCCC-C--------CccEEEEEEeCC-----ceeeecCCCCCCCceeecceeeeccHHHHHHhhccCCce
Confidence 45678888877531 0 012245555554 455677777778999999998886532 22458
Q ss_pred EEEEEecc-CCCCCCccEEEEEECCcc---CCc-----ceEEEccCCCC
Q 007734 537 RIEVHEYD-MSEKDDFGGQTCLPVSEL---KQG-----IRAVPLHDRKG 576 (591)
Q Consensus 537 rf~V~D~d-~~~~dd~lGq~~ipL~sL---~~G-----yR~vpL~d~~g 576 (591)
++..+..| ..+..+.+|...++|.+. ..| .+|.+|...++
T Consensus 68 Kl~c~a~~~~~~~re~iGyv~LdLRsa~~~~~~~~~~~~~W~~LL~~~~ 116 (340)
T PF12416_consen 68 KLQCFAVDGSTGKRESIGYVVLDLRSAVVPQEKNQKQKPKWYKLLSSSS 116 (340)
T ss_pred EEEEEEecCCCCcceeccEEEEEccccccccccccccCCCeeEcccccc
Confidence 88888877 456678999999999999 555 68999987733
No 255
>cd08621 PI-PLCXDc_like_2 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins. This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl
Probab=63.68 E-value=19 Score=37.89 Aligned_cols=92 Identities=16% Similarity=0.192 Sum_probs=59.8
Q ss_pred CCcccceeeeccCcccc---cCCC-------CCCCCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCccc------
Q 007734 112 TAPVSHYFIYTGHNSYL---TGNQ-------LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT------ 175 (591)
Q Consensus 112 ~~PLs~YfI~SSHNTYL---~g~Q-------l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlt------ 175 (591)
+.||++-.|=-|||+.- .+.- -.+.+--..+..=|..|+|-+.|-+=-..+ ++-.++||.-..
T Consensus 6 ~~~L~~l~iPGTHdS~~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiRyfDlRv~~~~~-~~~~~~H~~~~~~~~~G~ 84 (300)
T cd08621 6 DRPLRHIVMPGTHDSGMSSLTGGLWPVDGNDSNTQTQGLSIYDQLRAGARYFDIRPVITHG-GELWTGHYNGEDASAQGA 84 (300)
T ss_pred CeEhhhccccccchhccccccCCCccccccccccccCCCCHHHHHhcCCcEEEEEEEEcCC-CcEEEEecccccccccCc
Confidence 47999999999999852 2221 112222334567789999998888743222 345788876532
Q ss_pred ccchHHHHHHHHhhhccccCCCceEEeec
Q 007734 176 APVELIKCLRSIKEYAFVASEYPVVITLE 204 (591)
Q Consensus 176 s~i~f~dvi~aI~~~AF~~S~yPvILSlE 204 (591)
+..+|.|||+.|+++.=....=-|||.+-
T Consensus 85 ~~~~l~~vL~~v~~Fl~~~p~EvViL~~~ 113 (300)
T cd08621 85 NGESLDDILDEVNRFTDENPGELVILNFS 113 (300)
T ss_pred CCCcHHHHHHHHHHHHHhCCCcEEEEEEE
Confidence 25899999999999643332333777765
No 256
>KOG4306 consensus Glycosylphosphatidylinositol-specific phospholipase C [Signal transduction mechanisms]
Probab=60.41 E-value=33 Score=35.98 Aligned_cols=83 Identities=27% Similarity=0.370 Sum_probs=54.9
Q ss_pred HHHHhCCCcEEEEEee---cCCCCCCceEeeCCcccccchHHHHHHHHhhhccccCCCceEEeeccC----CCHHHHHHH
Q 007734 143 IRALQKGVRVIELDIW---PNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDH----LTPDLQAKV 215 (591)
Q Consensus 143 ~~aL~~GCRcvElD~W---dg~~~~~piv~HG~tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~H----cs~~qQ~~m 215 (591)
..=|..|.|...|=+= +++| .+--|+||-+.| ++..+|+.-|+++-=.+-+ =||| ||.. -+..--..+
T Consensus 73 ~~QL~~GvRylDlRi~~~~~~~D-~~~~i~HGl~~~--~~v~~vL~ev~~Fl~~h~e-EVVi-L~f~~~fg~~~~~h~~l 147 (306)
T KOG4306|consen 73 REQLVAGVRYLDLRIGYKLMDPD-REFYICHGLFST--YPVLEVLNEVRQFLSEHPE-EVVI-LEFRHFFGMTEPHHRKL 147 (306)
T ss_pred HHHHhhcceEEEEEeeeccCCCC-cceEEEeecccc--ccHHHHHHHHHHHHHhCCC-EEEE-EeccchhccCccHHHHH
Confidence 4456789999777765 2233 234799995544 5558899888875322222 2333 5543 356777788
Q ss_pred HHHHHHHhhccccCC
Q 007734 216 AEMVTQTLGEILFTP 230 (591)
Q Consensus 216 a~~l~~~~Gd~L~~~ 230 (591)
...+++.||++|+.+
T Consensus 148 ~~~ik~~~g~~l~~d 162 (306)
T KOG4306|consen 148 VLVIKQGFGDILCDD 162 (306)
T ss_pred HHHHHHHhcccccCh
Confidence 889999999999943
No 257
>KOG1329 consensus Phospholipase D1 [Lipid transport and metabolism]
Probab=55.52 E-value=14 Score=43.79 Aligned_cols=97 Identities=12% Similarity=0.172 Sum_probs=71.2
Q ss_pred CCceEEEEEeccCCCceeeeccccCCC-CCCccCcEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcc-
Q 007734 489 PDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI- 566 (591)
Q Consensus 489 ~DpyV~V~i~g~p~d~~k~kTkvi~nn-~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~Gy- 566 (591)
.++|+.+.+... .-.+|..+.+. -+|.|.+.|..-+... .+.+.|+|.+.+..+-..++|.+.+|+-.+..|-
T Consensus 138 ~e~Ylt~~l~~~----~~~~t~~~~~f~e~s~~~f~~~~~~~h~-~g~v~~~~~~~~~~G~s~~w~~v~~s~~~~~~~~~ 212 (887)
T KOG1329|consen 138 LENYLTVVLHKA----RYRRTHVIYEFLENSRWSFSFDIGFAHK-AGYVIFRVKGARVPGWSKRWGRVKISFLQYCSGHR 212 (887)
T ss_pred ccchheeeechh----hhhchhhhhcccccchhhhhcccccccc-ccEEEEeecCCccccceeEEEEeccchhhhhcccc
Confidence 477998888752 34567777777 5899999887655544 3689999998887665678899999999888874
Q ss_pred --eEEEccCCCCCcccC-eEEEEEEEE
Q 007734 567 --RAVPLHDRKGERYKS-VKLLMHFEF 590 (591)
Q Consensus 567 --R~vpL~d~~g~~~~~-asLlv~i~f 590 (591)
.++++++.++++..+ +.+.+++.|
T Consensus 213 ~~~~~~Il~~d~~~~~~~~~~~~~~~~ 239 (887)
T KOG1329|consen 213 IGGWFPILDNDGKPHQKGSNESLRLGF 239 (887)
T ss_pred ccceeeeeccCCccccCCcccceEEee
Confidence 467888888888644 444454554
No 258
>PRK07259 dihydroorotate dehydrogenase 1B; Reviewed
Probab=52.06 E-value=41 Score=35.06 Aligned_cols=79 Identities=22% Similarity=0.296 Sum_probs=52.0
Q ss_pred CCCCCCCCChHHHHHHHhC----C-CcEEEEEeecCCCCCCceEeeC-Ccc-cccchHHHHHHHHhhhccccCCCceEEe
Q 007734 130 GNQLNSDCSDVPIIRALQK----G-VRVIELDIWPNSKKDNVDVLHG-GTM-TAPVELIKCLRSIKEYAFVASEYPVVIT 202 (591)
Q Consensus 130 g~Ql~g~Ss~e~Y~~aL~~----G-CRcvElD~Wdg~~~~~piv~HG-~tl-ts~i~f~dvi~aI~~~AF~~S~yPvILS 202 (591)
+=|+.| ++.+.|.++..+ | +..|||.+.- |..-|| ..+ ...=...+++++|++.. ++||++-
T Consensus 95 i~si~g-~~~~~~~~~a~~~~~aG~~D~iElN~~c------P~~~~gg~~~~~~~~~~~eiv~~vr~~~----~~pv~vK 163 (301)
T PRK07259 95 IANVAG-STEEEYAEVAEKLSKAPNVDAIELNISC------PNVKHGGMAFGTDPELAYEVVKAVKEVV----KVPVIVK 163 (301)
T ss_pred EEEecc-CCHHHHHHHHHHHhccCCcCEEEEECCC------CCCCCCccccccCHHHHHHHHHHHHHhc----CCCEEEE
Confidence 345555 468888887754 8 9999999863 222353 222 22335789999999864 7999988
Q ss_pred eccCCCHHHHHHHHHHHHH
Q 007734 203 LEDHLTPDLQAKVAEMVTQ 221 (591)
Q Consensus 203 lE~Hcs~~qQ~~ma~~l~~ 221 (591)
|-. +.+.-..+|+.+.+
T Consensus 164 l~~--~~~~~~~~a~~l~~ 180 (301)
T PRK07259 164 LTP--NVTDIVEIAKAAEE 180 (301)
T ss_pred cCC--CchhHHHHHHHHHH
Confidence 753 33445567776655
No 259
>KOG0906 consensus Phosphatidylinositol 3-kinase VPS34, involved in signal transduction [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=48.67 E-value=17 Score=41.64 Aligned_cols=85 Identities=24% Similarity=0.322 Sum_probs=55.9
Q ss_pred CCCceEEEEEeccCCCc-eeeeccccCCCCCCccCcEEEEeeecCCc---cEEEEEEEeccCCCCCCccEEEEEECCc--
Q 007734 488 PPDFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSVPEL---ALLRIEVHEYDMSEKDDFGGQTCLPVSE-- 561 (591)
Q Consensus 488 ~~DpyV~V~i~g~p~d~-~k~kTkvi~nn~NPvWNEtf~F~v~~pel---a~Lrf~V~D~d~~~~dd~lGq~~ipL~s-- 561 (591)
.+|.||+..+...+... ..-+|..+.-.-.-.|||=+++.+..+++ |.+.+++||........|+|+.++.+-.
T Consensus 46 ~~~l~~~c~v~~~~~~~~lP~~ts~~~~~~~~~wnewLtlpvky~dLt~~a~l~itiW~~n~~~~~~~vg~~t~~lf~k~ 125 (843)
T KOG0906|consen 46 SSDLYVTCQVFAEGKPFALPVRTSYKAFSKRINWNEWLTLPVKYSDLTRNAQLAITIWDVNGPKKAVFVGGTTVSLFGKY 125 (843)
T ss_pred chhhhheeeeeccCCcccCCccccccccCCccchhhhhccccccccccccceEEEEEEecCCCceeeeccceEEEeeccc
Confidence 35677776665322110 01123222111112399999999988776 6899999998877777899998887754
Q ss_pred --cCCcceEEEcc
Q 007734 562 --LKQGIRAVPLH 572 (591)
Q Consensus 562 --L~~GyR~vpL~ 572 (591)
+++|..-++|.
T Consensus 126 ~~lk~G~~~l~~~ 138 (843)
T KOG0906|consen 126 GMLKQGMQDLKLW 138 (843)
T ss_pred chHhhhhhhcccc
Confidence 67898888775
No 260
>PTZ00183 centrin; Provisional
Probab=48.60 E-value=68 Score=29.10 Aligned_cols=62 Identities=16% Similarity=0.352 Sum_probs=44.2
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 25 DAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 25 ~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.++..+|..+-.+ +.++.++|..+|+... . ..+...+..++..+.. -+.+.+++++|...+.
T Consensus 17 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g-~-~~~~~~~~~l~~~~d~------~~~g~i~~~eF~~~~~ 80 (158)
T PTZ00183 17 KEIREAFDLFDTDGSGTIDPKELKVAMRSLG-F-EPKKEEIKQMIADVDK------DGSGKIDFEEFLDIMT 80 (158)
T ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCC------CCCCcEeHHHHHHHHH
Confidence 4566668777543 8899999999998653 2 2466677777777642 1246799999998875
No 261
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=47.99 E-value=22 Score=23.72 Aligned_cols=26 Identities=12% Similarity=0.524 Sum_probs=22.0
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHH
Q 007734 26 AVKSMFDQYSEN--GTMTVDHLHRFLIE 51 (591)
Q Consensus 26 ei~~if~~~~~~--~~~~~~~~~~Fl~~ 51 (591)
||..+|+.|=.+ +.++.++|...|+.
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 688999999543 89999999999864
No 262
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=45.49 E-value=22 Score=23.58 Aligned_cols=26 Identities=15% Similarity=0.473 Sum_probs=21.2
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHH
Q 007734 26 AVKSMFDQYSEN--GTMTVDHLHRFLIE 51 (591)
Q Consensus 26 ei~~if~~~~~~--~~~~~~~~~~Fl~~ 51 (591)
|+..+|..|-.+ ..|+.++|+.+|++
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~ 28 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRK 28 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 578899999644 89999999999974
No 263
>PTZ00184 calmodulin; Provisional
Probab=45.09 E-value=86 Score=27.93 Aligned_cols=63 Identities=14% Similarity=0.332 Sum_probs=44.3
Q ss_pred hHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 25 DAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 25 ~ei~~if~~~~~-~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
+++...|..+-. + +.++.++|..+|... +. ..+.+.+..++..+... ..+.++++.|..+|..
T Consensus 11 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~-~~-~~~~~~~~~~~~~~d~~------~~g~i~~~ef~~~l~~ 75 (149)
T PTZ00184 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQ-NPTEAELQDMINEVDAD------GNGTIDFPEFLTLMAR 75 (149)
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHh-CC-CCCHHHHHHHHHhcCcC------CCCcCcHHHHHHHHHH
Confidence 456667777643 3 889999999999754 33 24566777787776521 2357999999998873
No 264
>PF11422 IBP39: Initiator binding protein 39 kDa; InterPro: IPR024238 Initiator binding protein 39kDa (IBP39) recognises the initiator (Inr), which in Trichomonas vaginalis is solely responsible for transcription start site selection. IBP39 consists of an N-terminal Inr binding domain, a flexible linker, and a C-terminal domain. The C-terminal domain interacts with the RNAP II large subunit C-terminal domain. Binding of IBP39 to Inr recruits RNAP II and initiates transcription []. This entry represents the C-terminal domain.; PDB: 1Q88_A 1Q87_B 1Q89_A.
Probab=43.78 E-value=35 Score=32.89 Aligned_cols=99 Identities=18% Similarity=0.283 Sum_probs=62.9
Q ss_pred chHHHHHHHHhhCC---CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc--cCCC
Q 007734 24 PDAVKSMFDQYSEN---GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF--GDIN 98 (591)
Q Consensus 24 r~ei~~if~~~~~~---~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~--s~~n 98 (591)
|.++..+|.++.+. ..++.+.|..-+.+.=+....+.+.|.++|...-.. .+...+|+.+|..||. ..++
T Consensus 18 k~~vi~~W~eiv~~~~i~av~~~~Fi~~aa~~f~q~~q~~~Na~~~I~~il~~-----k~~~~iT~~Df~~F~A~FGP~~ 92 (181)
T PF11422_consen 18 KRNVISIWEEIVQNHGIFAVSLDFFIKKAANRFKQPSQSLKNAIQVIQYILTP-----KNTNVITIPDFYKFLARFGPEE 92 (181)
T ss_dssp HHHHHHHHHHHHSSSS--EEEHHHHHHHHHHHHS-TTS-HHHHHHHHHHHS-------SS-SEEEHHHHHHHHHHSSSGG
T ss_pred HHHHHHHHHHHhcCCCcceeeHHHHHHHHHHHhccccccccchHHHHHHHHcC-----CCCceeeHHHHHHHHHHhCCch
Confidence 56788999999876 378888888776654333345788888888765411 1235789999999876 3322
Q ss_pred CCC-C------------C---C-CCcccCCCCcccceeeeccCccc
Q 007734 99 PPL-S------------P---T-PVVHHDMTAPVSHYFIYTGHNSY 127 (591)
Q Consensus 99 ~~~-~------------~---~-~~v~qdM~~PLs~YfI~SSHNTY 127 (591)
.++ + + + ....+-|+++++-||=+.=||=.
T Consensus 93 tim~KI~~lL~~s~~~~~wl~~~Pd~~~~~~~~i~g~f~~t~~NC~ 138 (181)
T PF11422_consen 93 TIMEKIHSLLCSSNNDGQWLYFDPDAEKNFDNSISGYFDNTEPNCF 138 (181)
T ss_dssp GHHHHHHHHHHHHHTTTS-B-SSSSTTTTTCCS-EEEEESSSTTEE
T ss_pred hHHHHHHHHHHhhccCCcceeeCchhhcccCcccceeeccCCCceE
Confidence 211 0 0 1 22456788899999988877743
No 265
>PF11618 DUF3250: Protein of unknown function (DUF3250); InterPro: IPR021656 This family of proteins represents a protein with unknown function. It may be the C2 domain from KIAA1005 however this cannot be confirmed. ; PDB: 2YRB_A.
Probab=42.35 E-value=78 Score=28.04 Aligned_cols=79 Identities=15% Similarity=0.182 Sum_probs=43.9
Q ss_pred eeccccCCCCCCccCcEEEEeeecCCc-------cEEEEEEEeccCCCCCCccEEEEEECCccC--Cc---ceEEEccCC
Q 007734 507 KKTKTLEDNWIPSWNEEFEFPLSVPEL-------ALLRIEVHEYDMSEKDDFGGQTCLPVSELK--QG---IRAVPLHDR 574 (591)
Q Consensus 507 ~kTkvi~nn~NPvWNEtf~F~v~~pel-------a~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~--~G---yR~vpL~d~ 574 (591)
..|.++. +.+|.+|-+-.|.|...++ ..+.++++..- ...-..+|.+.+++..+- .| +-.+.|.+.
T Consensus 13 q~Tpvv~-G~~p~y~fts~y~V~~d~~fl~YLq~~~~~lELhqa~-g~d~~tla~~~i~l~~ll~~~~~~i~~~~~l~g~ 90 (107)
T PF11618_consen 13 QTTPVVR-GLNPFYDFTSQYKVTMDDLFLHYLQTGSLTLELHQAL-GSDFETLAAGQISLRPLLESNGERIHGSATLVGV 90 (107)
T ss_dssp EE---EE-SSS----EEEEEEE--SHHHHHHHHH--EEEEEEEE--SS-EEEEEEEEE--SHHHH--S--EEEEEEE-BS
T ss_pred eccccee-CCCccceeEEEEEEEcCHHHHHHhhcCCEEEEEEeec-cCCeEEEEEEEeechhhhcCCCceEEEEEEEecc
Confidence 3455554 7899999999998876543 46889988754 333568999999999874 33 456789899
Q ss_pred CCCcccCeEEEEEEE
Q 007734 575 KGERYKSVKLLMHFE 589 (591)
Q Consensus 575 ~g~~~~~asLlv~i~ 589 (591)
+|+. .++|-..+.
T Consensus 91 ~~~~--~g~l~y~~r 103 (107)
T PF11618_consen 91 SGED--FGTLEYWIR 103 (107)
T ss_dssp SS-T--SEEEEEEEE
T ss_pred CCCe--EEEEEEEEE
Confidence 9984 456665443
No 266
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain. DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively. DHPD catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines. DHPD contains two FAD, two FMN and eight [4Fe-4S] clusters, arranged in two electron transfer chains that pass its homodimeric interface twice. Two of
Probab=40.46 E-value=1.1e+02 Score=31.48 Aligned_cols=90 Identities=14% Similarity=0.204 Sum_probs=57.7
Q ss_pred cCCCCCCCCChHHHHHHH----hCCCcEEEEEeecCCCCCCceEeeCCc-ccccchHHHHHHHHhhhccccCCCceEEee
Q 007734 129 TGNQLNSDCSDVPIIRAL----QKGVRVIELDIWPNSKKDNVDVLHGGT-MTAPVELIKCLRSIKEYAFVASEYPVVITL 203 (591)
Q Consensus 129 ~g~Ql~g~Ss~e~Y~~aL----~~GCRcvElD~Wdg~~~~~piv~HG~t-lts~i~f~dvi~aI~~~AF~~S~yPvILSl 203 (591)
++-|+.| ++.+.|.++. ..|+..|||++-- +. .-.|.. +...=..++++++|++.. +.||++-|
T Consensus 101 vi~si~g-~~~~~~~~~a~~~~~~G~d~ielN~~c-P~-----~~~~~~~~~~~~~~~eiv~~vr~~~----~~pv~vKl 169 (289)
T cd02810 101 LIASVGG-SSKEDYVELARKIERAGAKALELNLSC-PN-----VGGGRQLGQDPEAVANLLKAVKAAV----DIPLLVKL 169 (289)
T ss_pred EEEEecc-CCHHHHHHHHHHHHHhCCCEEEEEcCC-CC-----CCCCcccccCHHHHHHHHHHHHHcc----CCCEEEEe
Confidence 4456655 3555554443 4599999999964 11 112333 223345688999999754 79999998
Q ss_pred ccCCCHHHHHHHHHHHHHHhhccccC
Q 007734 204 EDHLTPDLQAKVAEMVTQTLGEILFT 229 (591)
Q Consensus 204 E~Hcs~~qQ~~ma~~l~~~~Gd~L~~ 229 (591)
-..-+.+.=..+|+.+.+.=-|.|..
T Consensus 170 ~~~~~~~~~~~~a~~l~~~Gad~i~~ 195 (289)
T cd02810 170 SPYFDLEDIVELAKAAERAGADGLTA 195 (289)
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 87777777777888776643354543
No 267
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=39.86 E-value=39 Score=20.24 Aligned_cols=26 Identities=15% Similarity=0.478 Sum_probs=20.4
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHH
Q 007734 26 AVKSMFDQYSEN--GTMTVDHLHRFLIE 51 (591)
Q Consensus 26 ei~~if~~~~~~--~~~~~~~~~~Fl~~ 51 (591)
|+..+|..+-.+ +.++.++|..+++.
T Consensus 1 ~~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 1 ELKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred CHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 467788888544 78999999998864
No 268
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=37.93 E-value=1.2e+02 Score=29.02 Aligned_cols=60 Identities=12% Similarity=0.336 Sum_probs=44.5
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 26 AVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 26 ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
++++.|..+..+ +.|+..+|...|+.-+.. .+.+.+..|++.+- . +...|++..|+..|-
T Consensus 21 ~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~--~s~~ei~~l~~~~d------~-~~~~idf~~Fl~~ms 82 (160)
T COG5126 21 ELKEAFQLFDRDSDGLIDRNELGKILRSLGFN--PSEAEINKLFEEID------A-GNETVDFPEFLTVMS 82 (160)
T ss_pred HHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCC--CcHHHHHHHHHhcc------C-CCCccCHHHHHHHHH
Confidence 344445555543 899999999999965543 68888888888754 1 347899999999886
No 269
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=37.53 E-value=91 Score=29.76 Aligned_cols=65 Identities=18% Similarity=0.416 Sum_probs=50.7
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
.+++||..-|+-|=-+ .+++..+|++-|... ++ ..+.+.+..|+..+... +.+.++.+.|...+.
T Consensus 89 ~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~l-ge-~~~deev~~ll~~~d~d------~dG~i~~~eF~~~~~ 155 (160)
T COG5126 89 DKEEELREAFKLFDKDHDGYISIGELRRVLKSL-GE-RLSDEEVEKLLKEYDED------GDGEIDYEEFKKLIK 155 (160)
T ss_pred CcHHHHHHHHHHhCCCCCceecHHHHHHHHHhh-cc-cCCHHHHHHHHHhcCCC------CCceEeHHHHHHHHh
Confidence 4578899999998643 899999999999842 34 46888999999887632 246799999998776
No 270
>PF15625 CC2D2AN-C2: CC2D2A N-terminal C2 domain
Probab=34.25 E-value=1.3e+02 Score=28.65 Aligned_cols=67 Identities=18% Similarity=0.348 Sum_probs=47.4
Q ss_pred CceEEEEEeccCCCceeeeccccC--CCCCCccCcEEEEeee-cCCccEEEEEEEeccCCCCCCccEEEEEECCccC
Q 007734 490 DFYARVGIAGVPADTVMKKTKTLE--DNWIPSWNEEFEFPLS-VPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK 563 (591)
Q Consensus 490 DpyV~V~i~g~p~d~~k~kTkvi~--nn~NPvWNEtf~F~v~-~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~ 563 (591)
.-|++|.+.+ +...+|+... .+|.=.+||.|.+.+. .|+ .|.+.||.... ..+..|+++.+||-...
T Consensus 38 ~~~ikl~~N~----k~V~~T~~~~l~~dF~v~f~~~f~v~i~~~Pe--si~l~i~E~~~-~~~~~la~v~vpvP~~~ 107 (168)
T PF15625_consen 38 RYYIKLFFND----KEVSRTRSRPLWSDFRVHFNEIFNVQITRWPE--SIKLEIYEKSG-LSDRLLAEVFVPVPGST 107 (168)
T ss_pred eEEEEEEECC----EEEEeeeeEecCCCeEEeccCEEEEEEecCCC--EEEEEEEEccC-ccceEEEEEEeeCCCCc
Confidence 3488888765 3344565443 3466778999999875 354 68899998775 45889999999976543
No 271
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=33.92 E-value=1.4e+02 Score=27.56 Aligned_cols=64 Identities=22% Similarity=0.443 Sum_probs=48.4
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhcc
Q 007734 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (591)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s 95 (591)
..||.+.|.-|-.+ +++|+++|+.+|...= + ..+.+.+..+|...-. -..+.+++++|...+..
T Consensus 84 ~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg-~-~~~~~e~~~mi~~~d~------d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 84 SEELKEAFRVFDKDGDGFISASELKKVLTSLG-E-KLTDEECKEMIREVDV------DGDGKVNFEEFVKMMSG 149 (151)
T ss_pred HHHHHHHHHHHccCCCCcCcHHHHHHHHHHhC-C-cCCHHHHHHHHHhcCC------CCCCeEeHHHHHHHHhc
Confidence 45899999999643 8999999999999753 3 3678888888876541 12356789999988763
No 272
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=33.71 E-value=78 Score=24.34 Aligned_cols=46 Identities=20% Similarity=0.276 Sum_probs=32.3
Q ss_pred cCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHh
Q 007734 40 MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (591)
Q Consensus 40 ~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l 93 (591)
|+..++++||+...=+ ++.+.|..||++... -+.+.|..++|..|.
T Consensus 2 msf~Evk~lLk~~NI~--~~~~yA~~LFq~~D~------s~~g~Le~~Ef~~Fy 47 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNIE--MDDEYARQLFQECDK------SQSGRLEGEEFEEFY 47 (51)
T ss_dssp BEHHHHHHHHHHTT------HHHHHHHHHHH-S------SSSSEBEHHHHHHHH
T ss_pred CCHHHHHHHHHHHccC--cCHHHHHHHHHHhcc------cCCCCccHHHHHHHH
Confidence 7889999999965543 678899999988652 124678888888775
No 273
>PLN02591 tryptophan synthase
Probab=33.18 E-value=31 Score=35.26 Aligned_cols=94 Identities=20% Similarity=0.215 Sum_probs=56.2
Q ss_pred CCCChHHH---HHHH-hCCCcEEEEEee-cCCCCCCceEeeC--CcccccchHHHHHHHHhhhccccCCCceEEeeccCC
Q 007734 135 SDCSDVPI---IRAL-QKGVRVIELDIW-PNSKKDNVDVLHG--GTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL 207 (591)
Q Consensus 135 g~Ss~e~Y---~~aL-~~GCRcvElD~W-dg~~~~~piv~HG--~tlts~i~f~dvi~aI~~~AF~~S~yPvILSlE~Hc 207 (591)
|..+.|.. +++| ..||-.|||.+= .-|--|.|+|-.- ..|..-++++++++.+++.. ...+-|+|| =-..
T Consensus 11 G~P~~e~~~~~~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~~~~~r-~~~~~p~il--m~Y~ 87 (250)
T PLN02591 11 GDPDLDTTAEALRLLDACGADVIELGVPYSDPLADGPVIQAAATRALEKGTTLDSVISMLKEVA-PQLSCPIVL--FTYY 87 (250)
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCcccCHHHHHHHHHHHHcCCCHHHHHHHHHHHh-cCCCCCEEE--Eecc
Confidence 45555544 4444 579999999873 1122244666543 45777888999999999977 446789763 3345
Q ss_pred CHHHHHHHHH---HHHHHhhccccCCC
Q 007734 208 TPDLQAKVAE---MVTQTLGEILFTPG 231 (591)
Q Consensus 208 s~~qQ~~ma~---~l~~~~Gd~L~~~~ 231 (591)
++-.|.=+-+ -+++.=-|-|+.|+
T Consensus 88 N~i~~~G~~~F~~~~~~aGv~GviipD 114 (250)
T PLN02591 88 NPILKRGIDKFMATIKEAGVHGLVVPD 114 (250)
T ss_pred cHHHHhHHHHHHHHHHHcCCCEEEeCC
Confidence 5544533433 44443334455553
No 274
>KOG1452 consensus Predicted Rho GTPase-activating protein [Signal transduction mechanisms]
Probab=32.63 E-value=1.7e+02 Score=30.90 Aligned_cols=77 Identities=17% Similarity=0.156 Sum_probs=47.1
Q ss_pred ceeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCCceeeeccccCCCCCCccCcEEEEeeecCCccEEEEEE
Q 007734 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 540 (591)
Q Consensus 461 ~~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d~~k~kTkvi~nn~NPvWNEtf~F~v~~pela~Lrf~V 540 (591)
.+.|-+.++.|++|..... ...-..+.|+.++..- ..+.||.+.....-=.|.|+|+.++...+ .+.+-|
T Consensus 50 tGiL~~H~~~GRGLr~~p~----~kglt~~~ycVle~dr----qh~aRt~vrs~~~~f~w~e~F~~Dvv~~~--vl~~lv 119 (442)
T KOG1452|consen 50 TGILYFHAYNGRGLRMTPQ----QKGLTVCFYCVLEPDR----QHPARTRVRSSGPGFAWAEDFKHDVVNIE--VLHYLV 119 (442)
T ss_pred cceEEEEEecccccccChh----ccCceeeeeeeeeecc----cCccccccccCCCCccchhhceeecccce--eeeEEE
Confidence 3567788889998865321 1122345676555431 23445555444444579999999877543 577888
Q ss_pred EeccCCC
Q 007734 541 HEYDMSE 547 (591)
Q Consensus 541 ~D~d~~~ 547 (591)
|.|+...
T Consensus 120 ySW~pq~ 126 (442)
T KOG1452|consen 120 YSWPPQR 126 (442)
T ss_pred eecCchh
Confidence 8888543
No 275
>PTZ00466 actin-like protein; Provisional
Probab=32.26 E-value=54 Score=35.57 Aligned_cols=48 Identities=21% Similarity=0.210 Sum_probs=40.1
Q ss_pred chHHHHHHHHhhhccc-----cCCCceEEeeccCCCHHHHHHHHHHHHHHhhc
Q 007734 178 VELIKCLRSIKEYAFV-----ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225 (591)
Q Consensus 178 i~f~dvi~aI~~~AF~-----~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd 225 (591)
|.=.|.++.|=+|+|. .+++||+|+--.+++..++++|+++|=|.||-
T Consensus 83 v~dwd~~e~iw~~~f~~l~v~~~~~pvllte~~~~~~~~re~~~e~lFE~~~~ 135 (380)
T PTZ00466 83 IENWNDMENIWIHVYNSMKINSEEHPVLLTEAPLNPQKNKEKIAEVFFETFNV 135 (380)
T ss_pred ECCHHHHHHHHHHHHhhcccCCccCeEEEecCccccHHHHHHHHHHHhccCCC
Confidence 4447788888888883 36899999977888999999999999999985
No 276
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=31.67 E-value=29 Score=28.31 Aligned_cols=33 Identities=21% Similarity=0.306 Sum_probs=27.4
Q ss_pred CCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHc
Q 007734 21 SEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQ 53 (591)
Q Consensus 21 ~~~r~ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q 53 (591)
..+.++|.+-|+.++++ .++|.++|++-|.-+|
T Consensus 2 ~~s~eqv~~aFr~lA~~KpyVT~~dLr~~l~pe~ 35 (69)
T PF08726_consen 2 QDSAEQVEEAFRALAGGKPYVTEEDLRRSLTPEQ 35 (69)
T ss_dssp SSTCHHHHHHHHHHCTSSSCEEHHHHHHHS-CCC
T ss_pred CCCHHHHHHHHHHHHcCCCcccHHHHHHHcCcHH
Confidence 45778999999999988 9999999999886544
No 277
>PTZ00452 actin; Provisional
Probab=30.68 E-value=58 Score=35.20 Aligned_cols=49 Identities=14% Similarity=0.146 Sum_probs=40.3
Q ss_pred cchHHHHHHHHhhhcccc------CCCceEEeeccCCCHHHHHHHHHHHHHHhhc
Q 007734 177 PVELIKCLRSIKEYAFVA------SEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225 (591)
Q Consensus 177 ~i~f~dvi~aI~~~AF~~------S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd 225 (591)
.|.=.|.++.|=+|+|.. +++||+++=-..++..++++||++|=|.|+-
T Consensus 75 ~I~dwd~~e~iw~~~f~~~l~v~p~~~pvlitE~~~~~~~~Re~l~eilFE~~~v 129 (375)
T PTZ00452 75 IINSWDDIEIIWHHAFYNELCMSPEDQPVFMTDAPMNSKFNRERMTQIMFETFNT 129 (375)
T ss_pred EEcCHHHHHHHHHHHHHhhcCCCcccCceeeecCCCCCHHHHHHHHHHHhhccCC
Confidence 444478888888888842 5899999966777899999999999999986
No 278
>PRK05395 3-dehydroquinate dehydratase; Provisional
Probab=30.43 E-value=50 Score=30.99 Aligned_cols=65 Identities=22% Similarity=0.357 Sum_probs=45.1
Q ss_pred CCCCCChHHHHHHHhCCCc--EEEEEeecCC-------------CCCCceEeeCCccc-ccchHHHHHHHHhhhccccCC
Q 007734 133 LNSDCSDVPIIRALQKGVR--VIELDIWPNS-------------KKDNVDVLHGGTMT-APVELIKCLRSIKEYAFVASE 196 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCR--cvElD~Wdg~-------------~~~~piv~HG~tlt-s~i~f~dvi~aI~~~AF~~S~ 196 (591)
+.|.-+.+.+.+.|+.-|. -++++|.-.. ++-..||.--+.+| ++|.++|++.++ .
T Consensus 22 iYG~~tl~~i~~~~~~~a~~~g~~v~~~QSN~EGelId~I~~a~~~~dgiiINpga~THtSiAl~DAl~~~--------~ 93 (146)
T PRK05395 22 IYGSTTLADIEALLEEEAAELGVELEFFQSNHEGELIDRIHEARDGADGIIINPGAYTHTSVALRDALAAV--------S 93 (146)
T ss_pred cCCCCCHHHHHHHHHHHHHHcCCEEEEEeeCcHHHHHHHHHhcccCCcEEEECchHHHHHHHHHHHHHHcC--------C
Confidence 5688899999888887555 5688885211 11123555445565 899999999888 5
Q ss_pred CceEEeeccCCC
Q 007734 197 YPVVITLEDHLT 208 (591)
Q Consensus 197 yPvILSlE~Hcs 208 (591)
.|+ +|+|.|
T Consensus 94 ~P~---VEVHiS 102 (146)
T PRK05395 94 IPV---IEVHLS 102 (146)
T ss_pred CCE---EEEecC
Confidence 675 599987
No 279
>PRK09071 hypothetical protein; Validated
Probab=29.52 E-value=40 Score=35.85 Aligned_cols=55 Identities=18% Similarity=0.299 Sum_probs=35.3
Q ss_pred CCCCC--hHHHHHHHhCCCcEE----EEE--eecCCCC---------------CCceEeeCC-cccccc-hHHHHHHHHh
Q 007734 134 NSDCS--DVPIIRALQKGVRVI----ELD--IWPNSKK---------------DNVDVLHGG-TMTAPV-ELIKCLRSIK 188 (591)
Q Consensus 134 ~g~Ss--~e~Y~~aL~~GCRcv----ElD--~Wdg~~~---------------~~piv~HG~-tlts~i-~f~dvi~aI~ 188 (591)
+|++. +.++.+|++.-|.-+ .|| |++|.++ +-||+-||. ..||+. .-.||++++.
T Consensus 53 kgeT~eEi~g~~~a~r~~~~~~~~~~~iD~~~gtG~d~~~~~~~~~a~vlA~~G~~V~kHGnr~~ssk~g~saDvLeaLG 132 (323)
T PRK09071 53 KEETAEELAGFVEAIRERLQAPPLAVDLDWPSYAGKRRHLPWYLLAAKLLAQNGYRVLLHGGGGHTAGRLYTEQLLEALG 132 (323)
T ss_pred cCCCHHHHHHHHHHHHHhcccCCCCCceecCCcCCCCCCcccHHHHHHHHHHCCCeEEEECCCCCCCCcccHHHHHHHCC
Confidence 34443 456788887655433 366 6888653 357999997 455564 3788888763
No 280
>PTZ00281 actin; Provisional
Probab=29.37 E-value=57 Score=35.24 Aligned_cols=49 Identities=18% Similarity=0.182 Sum_probs=40.5
Q ss_pred cchHHHHHHHHhhhccc------cCCCceEEeeccCCCHHHHHHHHHHHHHHhhc
Q 007734 177 PVELIKCLRSIKEYAFV------ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225 (591)
Q Consensus 177 ~i~f~dvi~aI~~~AF~------~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd 225 (591)
.|.=.|..+.|=+|+|. .+++||+|+--.+++..++++|+++|=|.||-
T Consensus 76 ~i~dwd~~e~l~~~~f~~~l~v~p~~~pvllte~~~~~~~~re~l~e~lFE~~~v 130 (376)
T PTZ00281 76 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130 (376)
T ss_pred EEcCHHHHHHHHHHHHHhhccCCCccCeEEEecCCCCcHHHHHHHHHHHhcccCC
Confidence 34447888888888884 35799999977788999999999999999985
No 281
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=29.13 E-value=2e+02 Score=26.50 Aligned_cols=65 Identities=15% Similarity=0.293 Sum_probs=51.0
Q ss_pred hHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhccCC
Q 007734 25 DAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDI 97 (591)
Q Consensus 25 ~ei~~if~~~~~-~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~s~~ 97 (591)
.++..+|..+-. + ..++..+|...|+.--.. .+.+....+++++... ..+.++++.|...|....
T Consensus 8 ~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~--~t~~el~~~~~~~D~d------g~g~I~~~eF~~l~~~~~ 74 (151)
T KOG0027|consen 8 LELKEAFQLFDKDGDGKISVEELGAVLRSLGQN--PTEEELRDLIKEIDLD------GDGTIDFEEFLDLMEKLG 74 (151)
T ss_pred HHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCC--CCHHHHHHHHHHhCCC------CCCeEcHHHHHHHHHhhh
Confidence 478888988853 3 899999999999976654 5888889998887521 246799999999998543
No 282
>PF11478 Tachystatin_B: Antimicrobial chitin binding protein tachystatin B; InterPro: IPR020957 Tachystatin B is an antimicrobial chitin binding peptide and consists of two isotopes B1 and B2. Both structures contain a short antiparallel beta sheet with an inhibitory cysteine knot motif. Tyr(14) and Arg(17) are thought to be the essential residues for chitin binding []. ; PDB: 2DCW_A 2DCV_A.
Probab=28.69 E-value=20 Score=25.17 Aligned_cols=16 Identities=25% Similarity=0.515 Sum_probs=6.8
Q ss_pred HHHHHhCCCcEEEEEeecC
Q 007734 142 IIRALQKGVRVIELDIWPN 160 (591)
Q Consensus 142 Y~~aL~~GCRcvElD~Wdg 160 (591)
||.+|-+|+||- ++.|
T Consensus 1 yitclfrgarcr---vysg 16 (42)
T PF11478_consen 1 YITCLFRGARCR---VYSG 16 (42)
T ss_dssp ----B-TT-EEE---TT-S
T ss_pred CeEEEeccceEE---EecC
Confidence 788999999985 5554
No 283
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton. These filaments interact with myosin to produce a sliding effect, which is the basis of muscular contraction and many aspects of cell motility, including cytokinesis. Each actin protomer binds one molecule of ATP and has one high affinity site for either calcium or magnesium ions, as well as several low affinity sites. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Actin from many sources forms a tight complex with deoxyribonuclease (DNase I) although the significance of this is still unknown. The formation of this complex results in the inhibition of DNase I activity, and actin loses its ability to polymerise. It has been shown that an ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins [, ]. In vertebrates there are three groups of actin isoforms: alpha, beta and gamma. The alpha actins are found in muscle tissues and are a major constituent of the contractile apparatus. The beta and gamma actins co-exists in most cell types as components of the cytoskeleton and as mediators of internal cell motility. In plants there are many isoforms which are probably involved in a variety of functions such as cytoplasmic streaming, cell shape determination, tip growth, graviperception, cell wall deposition, etc. Recently some divergent actin-like proteins have been identified in several species. These proteins include centractin (actin-RPV) from mammals, fungi yeast ACT5, Neurospora crassa ro-4) and Pneumocystis carinii, which seems to be a component of a multi-subunit centrosomal complex involved in microtubule based vesicle motility (this subfamily is known as ARP1); ARP2 subfamily, which includes chicken ACTL, Saccharomyces cerevisiae ACT2, Drosophila melanogaster 14D and Caenorhabditis elegans actC; ARP3 subfamily, which includes actin 2 from mammals, Drosophila 66B, yeast ACT4 and Schizosaccharomyces pombe act2; and ARP4 subfamily, which includes yeast ACT3 and Drosophila 13E.; PDB: 2OAN_B 1HLU_A 2BTF_A 3UB5_A 3U4L_A 4EFH_A 1YVN_A 1YAG_A 1D4X_A 1MDU_B ....
Probab=27.71 E-value=68 Score=34.40 Aligned_cols=46 Identities=26% Similarity=0.372 Sum_probs=35.9
Q ss_pred HHHHHHHHhhhccc------cCCCceEEeeccCCCHHHHHHHHHHHHHHhhc
Q 007734 180 LIKCLRSIKEYAFV------ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225 (591)
Q Consensus 180 f~dvi~aI~~~AF~------~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd 225 (591)
=.|.++.|=+|+|. .+++||||+.-.+++..++++|+++|-|.||-
T Consensus 72 ~~~~~e~i~~~~~~~~l~~~~~~~~vll~~~~~~~~~~r~~l~e~lfE~~~~ 123 (393)
T PF00022_consen 72 DWDALEEIWDYIFSNLLKVDPSDHPVLLTEPPFNPRSQREKLAEILFEKFGV 123 (393)
T ss_dssp SHHHHHHHHHHHHHTTT-SSGGGSEEEEEESTT--HHHHHHHHHHHHHTS--
T ss_pred cccccccccccccccccccccccceeeeeccccCCchhhhhhhhhhhccccc
Confidence 35677777777775 57899999999999999999999999999985
No 284
>PF12738 PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2WT8_C 3EF1_A 3EF0_A.
Probab=27.51 E-value=44 Score=25.90 Aligned_cols=29 Identities=21% Similarity=0.168 Sum_probs=21.4
Q ss_pred ccCcccccCCCCCCCCChHHHHHHHhCCCcEEE
Q 007734 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIE 154 (591)
Q Consensus 122 SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvE 154 (591)
++++|+|.. +....+-|..|...|+.+|-
T Consensus 32 t~~~THLI~----~~~~~~K~~~A~~~gi~vV~ 60 (63)
T PF12738_consen 32 TKKTTHLIC----SSPEGKKYRKAKEWGIPVVS 60 (63)
T ss_dssp STT-SEEEE----ES--HHHHHHHHHCTSEEEE
T ss_pred cCCceEEEE----eCCCcHHHHHHHHCCCcEEC
Confidence 448899988 44556899999999998884
No 285
>PF14186 Aida_C2: Cytoskeletal adhesion; PDB: 2QZQ_A 2QZ5_A.
Probab=27.26 E-value=2.6e+02 Score=26.31 Aligned_cols=120 Identities=18% Similarity=0.153 Sum_probs=57.2
Q ss_pred eeEEEEEEeccccCcCCCCCccCCCCCCCceEEEEEeccCCC--ceeeeccccCCC-CC-CccCcEEEEeee---cCCcc
Q 007734 462 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD--TVMKKTKTLEDN-WI-PSWNEEFEFPLS---VPELA 534 (591)
Q Consensus 462 ~~L~V~Visa~~L~~~~~~~~~d~~~~~DpyV~V~i~g~p~d--~~k~kTkvi~nn-~N-PvWNEtf~F~v~---~pela 534 (591)
..|+|.|-... + .+.....|||+.|++....+. +..+.|.+.... .| =.||.+.+.+.. .|+.+
T Consensus 13 t~l~v~Iekig-l--------kda~~~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp~Ga 83 (147)
T PF14186_consen 13 TYLSVFIEKIG-L--------KDASQYIDPYFTVSVKDGNGKDVEPPQDTPVGSRREDNYVHFNNTVHLQTPLEKLPKGA 83 (147)
T ss_dssp -EEEEEEEEEE----------TTGGG-EEEEEEEEEE-TTS-BSS--EE--S-SEEETTEEEEEEEEE-SS-GGGS-TT-
T ss_pred ceEEEEEEEEE-E--------CChHHccCCeEEEEEECCCCCCccccccCCCcccccCCEEEEcccEEEcCCHHHCCCce
Confidence 44677766543 3 122234689999998754332 123445544111 22 335666665543 35557
Q ss_pred EEEEEEEeccCCC-CCCccEEEEEECCccCCcceEEEcc----CCCCCc---ccCeEEEEEEEE
Q 007734 535 LLRIEVHEYDMSE-KDDFGGQTCLPVSELKQGIRAVPLH----DRKGER---YKSVKLLMHFEF 590 (591)
Q Consensus 535 ~Lrf~V~D~d~~~-~dd~lGq~~ipL~sL~~GyR~vpL~----d~~g~~---~~~asLlv~i~f 590 (591)
.|-|++.++.... +-...|++.++++.|++|--.+.|+ |...+. +..-.|.+|+++
T Consensus 84 ai~fE~kH~K~kk~k~S~kcw~fme~dei~~g~~~lely~KPtD~~rkkl~llt~k~~yl~l~~ 147 (147)
T PF14186_consen 84 AIFFEFKHYKPKKKKTSTKCWAFMELDEIKPGPVVLELYKKPTDFKRKKLKLLTKKPLYLHLTL 147 (147)
T ss_dssp EEEEEEEEEETTTTCEEEEEEEEEEGGG--SEEEEE--EESS--TT--S--BS-SSS--EEEEE
T ss_pred EEEEEEEeeeccceeeeeeEEEEEEhhhccCCceeeehhcCCcChhHhhhhhccCCCccEEEeC
Confidence 7889998866432 2346799999999999996555664 333332 233445566543
No 286
>COG1590 Uncharacterized conserved protein [Function unknown]
Probab=26.39 E-value=24 Score=34.86 Aligned_cols=54 Identities=15% Similarity=0.207 Sum_probs=37.4
Q ss_pred CCChHHHHHHHhCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhh----ccccCCCceE
Q 007734 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEY----AFVASEYPVV 200 (591)
Q Consensus 136 ~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI~~~----AF~~S~yPvI 200 (591)
.||+.+=|.++..+ +-||+.+..--...|- ++++.+|.+|++.. +|....=|++
T Consensus 44 TSSCSGRI~V~e~~------~~g~k~gs~wl~K~H~-----~~~~~ev~ealk~~~~~~iwl~~~ppIl 101 (208)
T COG1590 44 TSSCSGRISVMEEP------SPGDKPGSRWLGKWHR-----PISLDEVLEALKKAREGYIWLKVQPPIL 101 (208)
T ss_pred eccccceEEEEecc------cCCCCCCCEEEEEecC-----cCCHHHHHHHHHhcccceEEEEeeCCEE
Confidence 67777777777666 7898765332345665 69999999999987 5555544443
No 287
>cd08687 C2_PKN-like C2 domain in Protein kinase C-like (PKN) proteins. PKN is a lipid-activated serine/threonine kinase. It is a member of the protein kinase C (PKC) superfamily, but lacks a C1 domain. There are at least 3 different isoforms of PKN (PRK1/PKNalpha/PAK1; PKNbeta, and PRK2/PAK2/PKNgamma). The C-terminal region contains the Ser/Thr type protein kinase domain, while the N-terminal region of PKN contains three antiparallel coiled-coil (ACC) finger domains which are relatively rich in charged residues and contain a leucine zipper-like sequence. These domains binds to the small GTPase RhoA. Following these domains is a C2-like domain. Its C-terminal part functions as an auto-inhibitory region. PKNs are not activated by classical PKC activators such as diacylglycerol, phorbol ester or Ca2+, but instead are activated by phospholipids and unsaturated fatty acids. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 struct
Probab=25.66 E-value=2.2e+02 Score=24.81 Aligned_cols=46 Identities=17% Similarity=0.276 Sum_probs=32.7
Q ss_pred CCCccCcEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcc
Q 007734 516 WIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI 566 (591)
Q Consensus 516 ~NPvWNEtf~F~v~~pela~Lrf~V~D~d~~~~dd~lGq~~ipL~sL~~Gy 566 (591)
-+..|++.|.+++.-. .-|.+.|+-.|. ..+.|-..+.|...+.|+
T Consensus 31 s~q~WDQ~Fti~LdRs--RELEI~VywrD~---RslCav~~lrLEd~~~~~ 76 (98)
T cd08687 31 SNQAWDQSFTLELERS--RELEIAVYWRDW---RSLCAVKFLKLEDERHEV 76 (98)
T ss_pred ccccccceeEEEeecc--cEEEEEEEEecc---hhhhhheeeEhhhhcccc
Confidence 3678999999988632 358889987764 456777778887744433
No 288
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=25.28 E-value=2.8e+02 Score=24.90 Aligned_cols=60 Identities=17% Similarity=0.269 Sum_probs=41.6
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHhc
Q 007734 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (591)
Q Consensus 23 ~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~~F~~~l~ 94 (591)
...+|...|..+=.+ +.|+.++|..+. . . ....-+..+|+.+-. -+.+.||+++|...|.
T Consensus 46 ~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~---l-~--~~e~~~~~f~~~~D~------n~Dg~IS~~Ef~~cl~ 107 (116)
T cd00252 46 CKDPVGWMFNQLDGNYDGKLSHHELAPIR---L-D--PNEHCIKPFFESCDL------DKDGSISLDEWCYCFI 107 (116)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHH---c-c--chHHHHHHHHHHHCC------CCCCCCCHHHHHHHHh
Confidence 345688889998543 889999999987 1 1 123344556666541 1347899999999985
No 289
>cd00466 DHQase_II Dehydroquinase (DHQase), type II. Dehydroquinase (or 3-dehydroquinate dehydratase) catalyzes the reversible dehydration of 3-dehydroquinate to form 3-dehydroshikimate. This reaction is part of two metabolic pathways: the biosynthetic shikimate pathway and the catabolic quinate pathway. There are two types of DHQases, which are distinct from each other in amino acid sequence and three-dimensional structure. Type I enzymes usually catalyze the biosynthetic reaction using a syn elimination mechanism. In contrast, type II enzymes, found in the quinate pathway of fungi and in the shikimate pathway of many bacteria, are dodecameric enzymes that employ an anti elimination reaction mechanism.
Probab=24.66 E-value=65 Score=30.02 Aligned_cols=66 Identities=17% Similarity=0.307 Sum_probs=46.0
Q ss_pred CCCCCChHHHHHHHhCCCc--EEEEEeecCC-------------CCCCceEeeCCccc-ccchHHHHHHHHhhhccccCC
Q 007734 133 LNSDCSDVPIIRALQKGVR--VIELDIWPNS-------------KKDNVDVLHGGTMT-APVELIKCLRSIKEYAFVASE 196 (591)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCR--cvElD~Wdg~-------------~~~~piv~HG~tlt-s~i~f~dvi~aI~~~AF~~S~ 196 (591)
+.|.-+.+.+.+.|+.-|+ -+|++|.-.. ++-..||.--+.+| ++|.++|++.++ .
T Consensus 20 iYG~~tl~~i~~~l~~~a~~~g~~v~~~QSN~Egelid~I~~a~~~~dgiIINpga~THtSvAi~DAl~~~--------~ 91 (140)
T cd00466 20 IYGTTTLADIEALLRELAAELGVEVEFFQSNHEGELIDWIHEARDGADGIIINPGAYTHTSIALRDALAAV--------S 91 (140)
T ss_pred cCCcCCHHHHHHHHHHHHHHcCCEEEEEeeCcHHHHHHHHHHhhccCcEEEEcchHHHHHHHHHHHHHHcC--------C
Confidence 6688888888888877666 5788886211 11134555555666 899999999887 3
Q ss_pred CceEEeeccCCCH
Q 007734 197 YPVVITLEDHLTP 209 (591)
Q Consensus 197 yPvILSlE~Hcs~ 209 (591)
.|+ +|+|.|-
T Consensus 92 ~P~---VEVHiSN 101 (140)
T cd00466 92 IPV---IEVHISN 101 (140)
T ss_pred CCE---EEEecCC
Confidence 565 5999873
No 290
>smart00268 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily
Probab=24.21 E-value=81 Score=33.67 Aligned_cols=46 Identities=22% Similarity=0.277 Sum_probs=37.7
Q ss_pred HHHHHHHHhhhccc------cCCCceEEeeccCCCHHHHHHHHHHHHHHhhc
Q 007734 180 LIKCLRSIKEYAFV------ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225 (591)
Q Consensus 180 f~dvi~aI~~~AF~------~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd 225 (591)
=.|+++.|=+|.|. .+++||+|+.-...+..+++.|+++|-+.||-
T Consensus 73 d~~~~e~i~~~~~~~~l~~~~~~~~vll~~p~~~~~~~r~~~~e~lfE~~~~ 124 (373)
T smart00268 73 NWDDMEKIWDYTFFNELRVEPEEHPVLLTEPPMNPKSNREKILEIMFETFNF 124 (373)
T ss_pred CHHHHHHHHHHHHhhhcCCCCccCeeEEecCCCCCHHHHHHHHHHhhccCCC
Confidence 36778888877776 25799999866667799999999999999984
No 291
>PF00977 His_biosynth: Histidine biosynthesis protein; InterPro: IPR006062 Histidine is formed by several complex and distinct biochemical reactions catalysed by eight enzymes. Proteins involved in steps 4 and 6 of the histidine biosynthesis pathway are contained in one family. These enzymes are called His6 and His7 in eukaryotes and HisA and HisF in prokaryotes. HisA is a phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (5.3.1.16 from EC), involved in the fourth step of histidine biosynthesis. The bacterial HisF protein is a cyclase which catalyzes the cyclization reaction that produces D-erythro-imidazole glycerol phosphate during the sixth step of histidine biosynthesis. The yeast His7 protein is a bifunctional protein which catalyzes an amido-transferase reaction that generates imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide. The latter is the ribonucleotide used for purine biosynthesis. The enzyme also catalyzes the cyclization reaction that produces D-erythro-imidazole glycerol phosphate, and is involved in the fifth and sixth steps in histidine biosynthesis.; GO: 0000105 histidine biosynthetic process; PDB: 2VEP_A 2X30_A 1VZW_A 2WJZ_A 2LLE_A 2A0N_A 1THF_D 1GPW_E 1VH7_A 1KA9_F ....
Probab=23.87 E-value=1.2e+02 Score=30.24 Aligned_cols=39 Identities=15% Similarity=0.160 Sum_probs=32.7
Q ss_pred CcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhhcc
Q 007734 150 VRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAF 192 (591)
Q Consensus 150 CRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI~~~AF 192 (591)
+=++-||+.+| -.++++||.-.+.+...+.++...+..+
T Consensus 123 ~ivvslD~~~g----~~v~~~gw~~~~~~~~~~~~~~~~~~g~ 161 (229)
T PF00977_consen 123 RIVVSLDARDG----YKVATNGWQESSGIDLEEFAKRLEELGA 161 (229)
T ss_dssp GEEEEEEEEET----EEEEETTTTEEEEEEHHHHHHHHHHTT-
T ss_pred cEEEEEEeeec----eEEEecCccccCCcCHHHHHHHHHhcCC
Confidence 44666999995 2589999999999999999999999875
No 292
>PTZ00004 actin-2; Provisional
Probab=23.53 E-value=97 Score=33.44 Aligned_cols=46 Identities=17% Similarity=0.151 Sum_probs=37.1
Q ss_pred HHHHHHHhhhccc------cCCCceEEeeccCCCHHHHHHHHHHHHHHhhcc
Q 007734 181 IKCLRSIKEYAFV------ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEI 226 (591)
Q Consensus 181 ~dvi~aI~~~AF~------~S~yPvILSlE~Hcs~~qQ~~ma~~l~~~~Gd~ 226 (591)
.|+++.|=+|+|. .+++||+|+--.+++..++++|+++|=|.||-.
T Consensus 80 ~d~~e~i~~~~~~~~l~v~~~~~pvllte~~~~~~~~r~~~~e~lFE~~~~~ 131 (378)
T PTZ00004 80 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETHNVP 131 (378)
T ss_pred HHHHHHHHHHHHHhhcccCCccCcceeecCCCCcHHHHHHHHHHHHhhcCCc
Confidence 5777777777763 368999998666778888999999999999854
No 293
>COG0323 MutL DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair]
Probab=22.34 E-value=94 Score=36.27 Aligned_cols=53 Identities=17% Similarity=0.245 Sum_probs=40.9
Q ss_pred HHHHHHHhCCCcEEEEEeecCCCCCCceEee---C-----------CcccccchHHHHHHHHhhhccc
Q 007734 140 VPIIRALQKGVRVIELDIWPNSKKDNVDVLH---G-----------GTMTAPVELIKCLRSIKEYAFV 193 (591)
Q Consensus 140 e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~H---G-----------~tlts~i~f~dvi~aI~~~AF~ 193 (591)
|-.-+||.+||.-|+|++|+|+- .-..|.- | +.-||||.=.+=+..|+.++|-
T Consensus 30 ELVENSlDAGAt~I~I~ve~gG~-~~I~V~DNG~Gi~~~Dl~la~~rHaTSKI~~~~DL~~I~TlGFR 96 (638)
T COG0323 30 ELVENSLDAGATRIDIEVEGGGL-KLIRVRDNGSGIDKEDLPLALLRHATSKIASLEDLFRIRTLGFR 96 (638)
T ss_pred HHHhcccccCCCEEEEEEccCCc-cEEEEEECCCCCCHHHHHHHHhhhccccCCchhHHHHhhccCcc
Confidence 55778999999999999999853 1233332 1 5689999877779999999996
No 294
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=21.77 E-value=72 Score=32.91 Aligned_cols=99 Identities=23% Similarity=0.285 Sum_probs=58.3
Q ss_pred ccccCCCCCCCCChHHH---HHHH-hCCCcEEEEEee-cCCCCCCceEeeC--CcccccchHHHHHHHHhhhccccCCCc
Q 007734 126 SYLTGNQLNSDCSDVPI---IRAL-QKGVRVIELDIW-PNSKKDNVDVLHG--GTMTAPVELIKCLRSIKEYAFVASEYP 198 (591)
Q Consensus 126 TYL~g~Ql~g~Ss~e~Y---~~aL-~~GCRcvElD~W-dg~~~~~piv~HG--~tlts~i~f~dvi~aI~~~AF~~S~yP 198 (591)
+|++. |..+.|.. +++| ..||-.|||-+= ..|--|.|+|-.- ..|-..++++++++.+++-. ...+-|
T Consensus 19 ~yi~a----G~P~~~~~~~~~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r-~~~~~p 93 (263)
T CHL00200 19 PFITA----GDPDIVITKKALKILDKKGADIIELGIPYSDPLADGPIIQEASNRALKQGINLNKILSILSEVN-GEIKAP 93 (263)
T ss_pred EEEeC----CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCccCHHHHHHHHHHHHcCCCHHHHHHHHHHHh-cCCCCC
Confidence 56663 45555544 4444 579999999872 2222344666543 45667788899999988876 446789
Q ss_pred eEEeeccCCCHHHHHH---HHHHHHHHhhccccCCC
Q 007734 199 VVITLEDHLTPDLQAK---VAEMVTQTLGEILFTPG 231 (591)
Q Consensus 199 vILSlE~Hcs~~qQ~~---ma~~l~~~~Gd~L~~~~ 231 (591)
+||. -.-++--|.= ..+-+++.=-|-++.|+
T Consensus 94 ~vlm--~Y~N~i~~~G~e~F~~~~~~aGvdgviipD 127 (263)
T CHL00200 94 IVIF--TYYNPVLHYGINKFIKKISQAGVKGLIIPD 127 (263)
T ss_pred EEEE--ecccHHHHhCHHHHHHHHHHcCCeEEEecC
Confidence 7643 3445555533 33334443334555553
No 295
>cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain. DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively.
Probab=21.03 E-value=2.7e+02 Score=28.70 Aligned_cols=78 Identities=18% Similarity=0.286 Sum_probs=48.6
Q ss_pred CCCCCCCChHHHHHHHh----CCCcEEEEEeecCCCCCCceEee-CCc-ccccchHHHHHHHHhhhccccCCCceEEeec
Q 007734 131 NQLNSDCSDVPIIRALQ----KGVRVIELDIWPNSKKDNVDVLH-GGT-MTAPVELIKCLRSIKEYAFVASEYPVVITLE 204 (591)
Q Consensus 131 ~Ql~g~Ss~e~Y~~aL~----~GCRcvElD~Wdg~~~~~piv~H-G~t-lts~i~f~dvi~aI~~~AF~~S~yPvILSlE 204 (591)
=||.| ++++.|.++.. .|+..|||.+.- |..-+ |.. +.+.=.+.+++++|++.. +.||++-|-
T Consensus 94 vsi~g-~~~~~~~~~a~~~~~~G~d~iElN~~c------P~~~~~g~~~~~~~~~~~eiv~~vr~~~----~~Pv~vKl~ 162 (296)
T cd04740 94 ASIAG-STVEEFVEVAEKLADAGADAIELNISC------PNVKGGGMAFGTDPEAVAEIVKAVKKAT----DVPVIVKLT 162 (296)
T ss_pred EEEec-CCHHHHHHHHHHHHHcCCCEEEEECCC------CCCCCCcccccCCHHHHHHHHHHHHhcc----CCCEEEEeC
Confidence 35555 45777776664 499999999874 22222 222 234455679999999864 799998764
Q ss_pred cCCCHHHHHHHHHHHHH
Q 007734 205 DHLTPDLQAKVAEMVTQ 221 (591)
Q Consensus 205 ~Hcs~~qQ~~ma~~l~~ 221 (591)
.. .+.-..+|+.+.+
T Consensus 163 ~~--~~~~~~~a~~~~~ 177 (296)
T cd04740 163 PN--VTDIVEIARAAEE 177 (296)
T ss_pred CC--chhHHHHHHHHHH
Confidence 32 2334455665554
No 296
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=20.19 E-value=2e+02 Score=29.47 Aligned_cols=85 Identities=18% Similarity=0.216 Sum_probs=61.4
Q ss_pred ccCcccccCCCCCCCCCh-HHHHHHH-hCCCcEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhhccccCCCce
Q 007734 122 TGHNSYLTGNQLNSDCSD-VPIIRAL-QKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPV 199 (591)
Q Consensus 122 SSHNTYL~g~Ql~g~Ss~-e~Y~~aL-~~GCRcvElD~Wdg~~~~~piv~HG~tlts~i~f~dvi~aI~~~AF~~S~yPv 199 (591)
..+|.-|.|.-=+|+||. -+....+ ..|+|.||++=-+ =..+-++++.|++ .+|+-
T Consensus 51 pannvLL~G~rGtGKSSlVkall~~y~~~GLRlIev~k~~-----------------L~~l~~l~~~l~~-----~~~kF 108 (249)
T PF05673_consen 51 PANNVLLWGARGTGKSSLVKALLNEYADQGLRLIEVSKED-----------------LGDLPELLDLLRD-----RPYKF 108 (249)
T ss_pred CCcceEEecCCCCCHHHHHHHHHHHHhhcCceEEEECHHH-----------------hccHHHHHHHHhc-----CCCCE
Confidence 467899999999999985 3333333 3599999995333 1235778888873 47888
Q ss_pred EEeeccCCCHHHHHHHHHHHHHHhhccccC
Q 007734 200 VITLEDHLTPDLQAKVAEMVTQTLGEILFT 229 (591)
Q Consensus 200 ILSlE~Hcs~~qQ~~ma~~l~~~~Gd~L~~ 229 (591)
||=+.. .|.+..+.-.+.||.+|--.|-.
T Consensus 109 Ilf~DD-LsFe~~d~~yk~LKs~LeGgle~ 137 (249)
T PF05673_consen 109 ILFCDD-LSFEEGDTEYKALKSVLEGGLEA 137 (249)
T ss_pred EEEecC-CCCCCCcHHHHHHHHHhcCcccc
Confidence 888875 78888888888999998544433
Done!