Query 007735
Match_columns 591
No_of_seqs 282 out of 2174
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 09:11:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007735.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007735hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 1E-101 4E-106 856.2 54.3 506 26-555 2-543 (552)
2 3sqr_A Laccase; multicopper ox 100.0 2.4E-99 8E-104 831.5 51.5 488 25-556 65-567 (580)
3 1zpu_A Iron transport multicop 100.0 1.8E-97 6E-102 817.0 50.1 484 26-557 1-506 (534)
4 3pxl_A Laccase; 4-copper prote 100.0 1.3E-96 4E-101 800.9 48.9 479 28-558 4-496 (499)
5 3t6v_A Laccase; beta barrel, o 100.0 1.3E-96 5E-101 800.8 47.8 478 28-554 5-492 (495)
6 1v10_A Laccase; multicopper bl 100.0 6.2E-96 2E-100 803.8 46.0 485 24-557 20-515 (521)
7 1hfu_A Laccase 1; oxidoreducta 100.0 9.9E-94 3.4E-98 783.7 43.1 476 29-558 6-495 (503)
8 2q9o_A Laccase-1; multicopper 100.0 2.3E-92 7.9E-97 781.1 49.7 488 24-556 30-546 (559)
9 2xu9_A Laccase; oxidoreductase 100.0 1.4E-84 4.7E-89 700.7 39.6 407 23-531 12-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 3.1E-84 1.1E-88 698.9 33.5 407 26-534 17-443 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 8.6E-83 2.9E-87 699.2 39.2 422 26-534 35-477 (534)
12 2wsd_A Spore coat protein A; o 100.0 5.1E-81 1.7E-85 684.8 41.4 429 26-534 24-512 (513)
13 3zx1_A Oxidoreductase, putativ 100.0 2.9E-80 9.9E-85 668.2 40.5 414 21-531 44-480 (481)
14 3gyr_A PHS, phenoxazinone synt 100.0 8.7E-80 3E-84 692.9 39.2 460 24-535 29-594 (612)
15 3aw5_A Multicopper oxidase; be 100.0 4.8E-80 1.6E-84 665.2 31.8 385 49-531 28-448 (448)
16 3od3_A Blue copper oxidase CUE 100.0 4.1E-78 1.4E-82 651.1 35.6 417 25-530 15-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 6.1E-77 2.1E-81 657.5 40.4 448 25-534 30-593 (612)
18 2j5w_A Ceruloplasmin, ferroxid 100.0 4.8E-55 1.6E-59 514.3 36.2 456 21-536 15-565 (1065)
19 3g5w_A Multicopper oxidase typ 100.0 6.3E-53 2.2E-57 434.3 31.6 271 26-315 1-278 (318)
20 2r7e_A Coagulation factor VIII 100.0 3.9E-55 1.3E-59 495.7 11.4 239 31-293 50-314 (742)
21 2zwn_A Two-domain type laccase 100.0 1E-51 3.5E-56 429.8 31.2 271 26-315 2-279 (339)
22 1kbv_A ANIA, major outer membr 100.0 9.5E-49 3.2E-53 405.4 30.1 263 22-315 33-309 (327)
23 2dv6_A Nitrite reductase; elec 100.0 1.6E-49 5.5E-54 429.8 22.0 401 23-535 24-436 (447)
24 3gdc_A Multicopper oxidase; be 100.0 7.4E-47 2.5E-51 384.3 28.7 236 25-293 32-273 (288)
25 2j5w_A Ceruloplasmin, ferroxid 100.0 2.6E-48 8.8E-53 457.1 15.8 412 44-534 616-1060(1065)
26 2zoo_A Probable nitrite reduct 100.0 3.2E-45 1.1E-49 395.3 30.0 268 22-315 23-299 (442)
27 1mzy_A Copper-containing nitri 100.0 7.5E-45 2.6E-49 377.8 23.8 269 21-315 26-320 (333)
28 3kw8_A Laccase, putative coppe 100.0 2.6E-44 8.7E-49 363.4 26.4 239 23-313 3-265 (276)
29 1oe1_A Dissimilatory copper-co 100.0 2E-44 6.9E-49 375.2 24.8 267 23-315 28-320 (336)
30 3tas_A Small laccase, multi-co 100.0 7.9E-44 2.7E-48 366.1 24.4 241 21-313 7-271 (313)
31 3t9w_A Small laccase, multi-co 100.0 1.1E-43 3.6E-48 362.4 23.7 243 20-314 22-288 (299)
32 2bw4_A Copper-containing nitri 100.0 7.6E-44 2.6E-48 371.4 22.0 268 22-315 33-326 (340)
33 3cg8_A Laccase; oxidoreductase 100.0 4.5E-40 1.5E-44 341.8 25.6 238 24-314 45-307 (343)
34 1sdd_B Coagulation factor V; c 100.0 2.8E-40 9.4E-45 372.4 20.1 221 52-293 63-312 (647)
35 1sdd_A Coagulation factor V; c 100.0 1.7E-41 5.8E-46 347.8 7.2 215 46-293 49-285 (306)
36 2dv6_A Nitrite reductase; elec 100.0 2.3E-38 7.9E-43 342.4 31.0 257 26-315 162-435 (447)
37 2r7e_B Coagulation factor VIII 100.0 2.4E-40 8.1E-45 375.3 12.7 249 24-293 130-441 (770)
38 2r7e_A Coagulation factor VIII 100.0 1.9E-36 6.4E-41 342.9 8.1 215 54-293 448-696 (742)
39 3cg8_A Laccase; oxidoreductase 99.9 1.2E-27 4.2E-32 248.2 14.9 225 213-551 76-319 (343)
40 3gdc_A Multicopper oxidase; be 99.9 1.2E-27 4.1E-32 242.9 13.8 233 189-532 54-288 (288)
41 2zwn_A Two-domain type laccase 99.9 5.7E-27 2E-31 243.4 16.7 246 190-533 24-278 (339)
42 3g5w_A Multicopper oxidase typ 99.9 1.3E-26 4.5E-31 238.2 15.5 249 190-534 23-278 (318)
43 3kw8_A Laccase, putative coppe 99.9 8.1E-26 2.8E-30 228.0 14.6 215 213-535 35-268 (276)
44 3t9w_A Small laccase, multi-co 99.9 1.7E-25 5.7E-30 227.9 13.5 216 213-535 57-290 (299)
45 3tas_A Small laccase, multi-co 99.9 7.3E-25 2.5E-29 224.9 17.5 217 213-536 41-275 (313)
46 1sdd_A Coagulation factor V; c 99.9 3.9E-23 1.3E-27 211.5 4.3 228 214-533 60-301 (306)
47 1sdd_B Coagulation factor V; c 99.8 1.1E-20 3.8E-25 212.6 16.2 246 213-533 68-328 (647)
48 1kbv_A ANIA, major outer membr 99.8 6.1E-20 2.1E-24 189.5 16.1 248 190-534 59-309 (327)
49 2bw4_A Copper-containing nitri 99.8 2.7E-19 9.4E-24 185.9 18.7 261 189-535 59-327 (340)
50 2r7e_B Coagulation factor VIII 99.8 4.1E-21 1.4E-25 217.9 2.6 243 213-532 198-456 (770)
51 1mzy_A Copper-containing nitri 99.8 1E-17 3.5E-22 173.5 19.4 263 189-535 52-321 (333)
52 2zoo_A Probable nitrite reduct 99.7 8.5E-17 2.9E-21 173.1 16.6 248 190-535 49-300 (442)
53 1oe1_A Dissimilatory copper-co 99.7 4.6E-16 1.6E-20 161.3 19.5 259 190-535 54-321 (336)
54 2uxt_A Protein SUFI, SUFI; oxi 99.6 9.7E-15 3.3E-19 157.0 19.2 237 27-293 152-426 (451)
55 3cvb_A Plastocyanin; cupredoxi 99.6 1.7E-16 5.7E-21 135.7 3.1 90 53-146 14-105 (105)
56 2xu9_A Laccase; oxidoreductase 99.6 4.3E-14 1.5E-18 151.6 19.7 224 43-293 174-425 (439)
57 1v10_A Laccase; multicopper bl 99.5 1.2E-12 4.1E-17 143.2 21.0 240 46-294 191-477 (521)
58 1hfu_A Laccase 1; oxidoreducta 99.5 1.6E-12 5.5E-17 141.7 21.5 244 46-294 165-456 (503)
59 3zx1_A Oxidoreductase, putativ 99.4 2.8E-12 9.6E-17 138.2 18.2 240 28-293 181-466 (481)
60 2cal_A Rusticyanin; iron respi 99.4 4.4E-13 1.5E-17 122.2 9.5 99 42-145 46-154 (154)
61 3t6v_A Laccase; beta barrel, o 99.4 4.6E-11 1.6E-15 129.4 22.5 244 46-294 168-457 (495)
62 3od3_A Blue copper oxidase CUE 99.4 1.6E-11 5.3E-16 132.4 18.3 230 46-293 183-475 (488)
63 1iby_A Nitrosocyanin; RED copp 99.3 4.8E-12 1.7E-16 109.2 11.0 104 29-146 3-112 (112)
64 1aoz_A Ascorbate oxidase; oxid 99.3 4.1E-11 1.4E-15 132.1 18.7 227 59-294 205-511 (552)
65 1zpu_A Iron transport multicop 99.3 4.1E-11 1.4E-15 131.3 18.4 242 46-294 167-467 (534)
66 3pxl_A Laccase; 4-copper prote 99.3 5.3E-11 1.8E-15 129.0 17.9 244 46-294 166-457 (499)
67 3aw5_A Multicopper oxidase; be 99.3 3.9E-11 1.3E-15 128.7 16.4 214 45-293 168-434 (448)
68 2q9o_A Laccase-1; multicopper 99.3 1.9E-10 6.6E-15 126.7 20.6 246 46-294 195-507 (559)
69 1fwx_A Nitrous oxide reductase 99.2 1.3E-11 4.5E-16 134.4 10.6 95 42-148 497-594 (595)
70 2g23_A PHS, phenoxazinone synt 99.2 2.4E-10 8.2E-15 126.3 18.9 232 46-293 254-576 (612)
71 2ov0_A Amicyanin; beta-sandwic 99.1 8.8E-11 3E-15 100.0 8.7 78 52-145 27-105 (105)
72 2wsd_A Spore coat protein A; o 99.1 2.7E-10 9.2E-15 124.4 14.7 218 46-294 230-496 (513)
73 3abg_A Bilirubin oxidase; clea 99.1 5.2E-10 1.8E-14 122.4 16.2 231 46-294 201-461 (534)
74 2aan_A Auracyanin A; cupredoxi 99.1 2.1E-10 7.2E-15 102.9 8.0 94 431-531 36-139 (139)
75 3cvb_A Plastocyanin; cupredoxi 99.0 3.2E-10 1.1E-14 96.3 7.7 85 430-531 19-104 (105)
76 2gim_A Plastocyanin; beta shee 99.0 5.2E-10 1.8E-14 95.2 8.1 83 57-146 19-106 (106)
77 3sqr_A Laccase; multicopper ox 99.0 2.5E-08 8.5E-13 109.5 20.3 240 47-294 226-530 (580)
78 2aan_A Auracyanin A; cupredoxi 98.9 8.6E-09 2.9E-13 92.3 11.1 90 54-145 31-139 (139)
79 3gyr_A PHS, phenoxazinone synt 98.8 5.1E-08 1.8E-12 108.9 17.0 92 190-294 459-577 (612)
80 1qhq_A Protein (auracyanin); e 98.8 5.2E-08 1.8E-12 87.2 12.2 92 54-146 29-140 (140)
81 2gim_A Plastocyanin; beta shee 98.7 1.2E-08 4.1E-13 86.7 6.1 85 430-531 20-105 (106)
82 4hci_A Cupredoxin 1; structura 98.7 3.6E-08 1.2E-12 82.9 8.3 79 52-145 22-100 (100)
83 2plt_A Plastocyanin; electron 98.7 1.6E-08 5.6E-13 84.5 5.6 77 57-145 17-98 (98)
84 1pcs_A Plastocyanin; electron 98.6 1.7E-08 5.9E-13 84.4 4.1 83 55-145 16-98 (98)
85 3c75_A Amicyanin; copper prote 98.6 1E-07 3.4E-12 84.4 8.7 78 52-145 54-132 (132)
86 1bxv_A Plastocyanin; copper pr 98.6 8E-08 2.7E-12 79.0 7.3 76 55-145 16-91 (91)
87 1qhq_A Protein (auracyanin); e 98.6 7.5E-08 2.6E-12 86.2 7.6 99 431-531 34-139 (140)
88 3erx_A Pseudoazurin; copper pr 98.6 1.8E-07 6E-12 81.5 8.6 75 57-146 20-94 (123)
89 2plt_A Plastocyanin; electron 98.5 1.6E-07 5.5E-12 78.4 7.9 81 430-531 18-98 (98)
90 1pcs_A Plastocyanin; electron 98.5 2.1E-07 7E-12 77.8 8.5 80 430-531 19-98 (98)
91 1kdj_A Plastocyanin; electron 98.5 2E-07 7E-12 78.4 7.9 79 57-145 16-102 (102)
92 3tu6_A Pseudoazurin (blue copp 98.5 1.8E-07 6.1E-12 81.8 7.2 77 57-148 22-98 (127)
93 1bxv_A Plastocyanin; copper pr 98.5 3.3E-07 1.1E-11 75.2 8.1 73 430-531 19-91 (91)
94 1b3i_A PETE protein, protein ( 98.5 3.9E-07 1.3E-11 75.9 8.2 77 57-145 18-97 (97)
95 1byp_A Protein (plastocyanin); 98.4 7.2E-07 2.5E-11 74.5 9.4 77 57-145 16-99 (99)
96 1plc_A Plastocyanin; electron 98.4 7.4E-07 2.5E-11 74.5 9.4 77 57-145 16-99 (99)
97 3ef4_A Pseudoazurin, blue copp 98.4 4E-07 1.4E-11 79.1 7.4 76 57-147 21-96 (124)
98 1iby_A Nitrosocyanin; RED copp 98.4 1.2E-06 4.2E-11 75.0 10.0 73 431-531 39-111 (112)
99 1b3i_A PETE protein, protein ( 98.3 4.7E-07 1.6E-11 75.4 5.3 78 431-531 20-97 (97)
100 4hci_A Cupredoxin 1; structura 98.3 2.4E-06 8.2E-11 71.5 9.0 72 431-531 29-100 (100)
101 1byp_A Protein (plastocyanin); 98.3 1.4E-06 4.6E-11 72.8 6.7 83 430-531 17-99 (99)
102 1paz_A Pseudoazurin precursor; 98.2 2.6E-06 9E-11 74.1 8.5 76 57-147 20-95 (123)
103 1iuz_A Plastocyanin; electron 98.2 1.5E-06 5.1E-11 72.5 6.2 79 55-145 15-98 (98)
104 1pmy_A Pseudoazurin; electron 98.2 3E-06 1E-10 73.8 7.7 76 57-147 20-95 (123)
105 1cuo_A Protein (azurin ISO-2); 98.2 7.6E-06 2.6E-10 71.7 10.2 92 54-146 14-129 (129)
106 1kdj_A Plastocyanin; electron 98.1 2.9E-06 1E-10 71.2 4.9 86 430-531 17-102 (102)
107 3ay2_A Lipid modified azurin p 98.0 1.7E-05 5.9E-10 72.4 9.3 97 49-146 47-167 (167)
108 1id2_A Amicyanin; beta barrel, 98.0 3E-05 1E-09 65.5 10.0 78 52-145 28-106 (106)
109 1plc_A Plastocyanin; electron 97.9 1.3E-05 4.4E-10 66.8 6.3 82 430-530 17-98 (99)
110 2ccw_A Azurin II, AZN-2; elect 97.9 7.2E-05 2.5E-09 65.4 10.8 92 54-146 14-129 (129)
111 2ux6_A Pseudoazurin; type-1 co 97.9 2.4E-05 8.2E-10 67.9 7.3 74 57-147 20-93 (122)
112 3sbq_A Nitrous-oxide reductase 97.9 2.9E-05 1E-09 83.0 8.9 91 46-146 546-637 (638)
113 1nwp_A Azurin; electron transp 97.8 7.6E-05 2.6E-09 65.2 9.9 91 54-145 14-128 (128)
114 2ov0_A Amicyanin; beta-sandwic 97.8 3E-05 1E-09 65.4 6.9 71 431-530 34-104 (105)
115 2iaa_C Azurin; quinoprotein, t 97.8 7E-05 2.4E-09 65.4 9.2 92 54-146 13-128 (128)
116 1fwx_A Nitrous oxide reductase 97.7 7.3E-05 2.5E-09 81.6 9.8 78 430-534 513-594 (595)
117 2cal_A Rusticyanin; iron respi 97.5 0.00031 1E-08 63.5 9.1 82 431-530 62-153 (154)
118 1iuz_A Plastocyanin; electron 97.2 0.001 3.5E-08 55.0 7.7 81 430-531 18-98 (98)
119 3ef4_A Pseudoazurin, blue copp 97.2 0.00046 1.6E-08 59.7 5.5 75 431-534 23-97 (124)
120 3tu6_A Pseudoazurin (blue copp 97.1 0.0005 1.7E-08 59.8 5.2 75 430-533 23-97 (127)
121 3fsa_A Azurin; copper, cupredo 97.1 0.0026 8.8E-08 54.8 9.2 88 54-145 14-125 (125)
122 1id2_A Amicyanin; beta barrel, 97.0 0.0012 4.2E-08 55.5 6.9 71 431-530 35-105 (106)
123 3erx_A Pseudoazurin; copper pr 97.0 0.0012 4.2E-08 57.0 6.5 73 431-532 22-94 (123)
124 3c75_A Amicyanin; copper prote 96.9 0.0017 5.8E-08 56.9 6.9 72 431-531 61-132 (132)
125 2cua_A Protein (CUA); CUA cent 96.5 0.013 4.4E-07 51.4 9.6 73 58-146 60-135 (135)
126 3sbq_A Nitrous-oxide reductase 96.1 0.021 7.2E-07 61.3 10.2 75 430-531 558-636 (638)
127 3s8f_B Cytochrome C oxidase su 96.0 0.029 1E-06 50.9 9.6 81 52-146 87-168 (168)
128 1paz_A Pseudoazurin precursor; 96.0 0.012 3.9E-07 50.9 6.3 74 431-533 22-95 (123)
129 1pmy_A Pseudoazurin; electron 95.9 0.0095 3.3E-07 51.4 5.3 37 493-533 59-95 (123)
130 2cua_A Protein (CUA); CUA cent 95.4 0.079 2.7E-06 46.3 9.5 72 432-531 62-134 (135)
131 3ay2_A Lipid modified azurin p 95.1 0.039 1.3E-06 50.1 6.7 91 431-531 59-166 (167)
132 2ux6_A Pseudoazurin; type-1 co 95.0 0.034 1.2E-06 47.8 5.9 71 431-532 22-92 (122)
133 1cuo_A Protein (azurin ISO-2); 94.7 0.11 3.7E-06 45.1 8.2 94 430-531 18-128 (129)
134 3s8f_B Cytochrome C oxidase su 94.0 0.31 1E-05 44.2 9.9 72 432-531 95-167 (168)
135 2iaa_C Azurin; quinoprotein, t 92.5 0.39 1.3E-05 41.5 7.8 92 430-531 17-127 (128)
136 2ccw_A Azurin II, AZN-2; elect 92.1 0.46 1.6E-05 41.0 7.9 92 430-531 18-128 (129)
137 1nwp_A Azurin; electron transp 92.1 0.43 1.5E-05 41.1 7.7 98 430-530 18-127 (128)
138 3fsa_A Azurin; copper, cupredo 91.8 0.97 3.3E-05 38.6 9.4 88 430-530 18-124 (125)
139 1cyx_A CYOA; electron transpor 79.2 3.8 0.00013 38.1 6.7 78 430-535 41-120 (205)
140 3hb3_B Cytochrome C oxidase su 74.6 5.4 0.00018 39.4 6.7 78 430-535 189-267 (298)
141 3isy_A Bsupi, intracellular pr 73.6 24 0.00081 29.7 9.6 72 220-293 16-102 (120)
142 2gsm_B Cytochrome C oxidase su 65.5 13 0.00045 35.9 7.2 78 430-535 171-249 (262)
143 3isy_A Bsupi, intracellular pr 64.4 63 0.0022 27.1 11.1 75 44-129 20-100 (120)
144 2r39_A FIXG-related protein; s 58.7 26 0.0009 29.1 7.1 46 223-278 34-81 (118)
145 1cyx_A CYOA; electron transpor 57.5 23 0.00078 32.8 6.9 74 58-145 41-115 (205)
146 1v54_B Cytochrome C oxidase po 56.9 15 0.0005 34.8 5.7 77 430-534 140-217 (227)
147 1fft_B Ubiquinol oxidase; elec 47.4 19 0.00064 35.8 4.9 77 431-535 152-230 (315)
148 2f1e_A Protein APAG; APAG prot 44.1 18 0.00061 30.8 3.6 47 69-115 34-86 (127)
149 2gsm_B Cytochrome C oxidase su 43.1 44 0.0015 32.2 6.7 76 58-147 171-247 (262)
150 3hb3_B Cytochrome C oxidase su 43.0 48 0.0016 32.5 7.0 77 57-147 188-265 (298)
151 1xvs_A Protein APAG; MCSG APC2 40.4 18 0.00063 30.7 3.1 55 69-123 33-95 (126)
152 1yew_A Particulate methane mon 40.2 46 0.0016 33.3 6.3 70 44-119 250-336 (382)
153 1xwv_A DER F II; beta sheets, 39.9 35 0.0012 28.9 4.9 69 50-118 17-93 (129)
154 3rfr_A PMOB; membrane, oxidore 39.3 62 0.0021 32.8 7.1 68 45-119 285-368 (419)
155 1xq4_A Protein APAG; all beta 38.5 25 0.00084 30.4 3.6 55 69-123 38-100 (139)
156 1nep_A EPV20, BNPC2, epididyma 38.2 35 0.0012 29.0 4.6 69 49-118 18-95 (130)
157 1tza_A APAG protein, SOR45; st 34.3 22 0.00075 30.6 2.6 55 69-123 33-95 (134)
158 1x9u_A Umecyanin; cupredoxin, 33.4 40 0.0014 28.1 4.0 35 113-148 72-107 (116)
159 2wtp_A ORF131 protein, CZCE; m 27.7 26 0.00088 29.8 1.9 21 214-234 71-91 (131)
160 2hj1_A Hypothetical protein; s 27.3 29 0.00099 28.0 2.1 24 47-70 59-82 (97)
161 1v54_B Cytochrome C oxidase po 26.5 95 0.0033 29.1 5.9 76 57-146 139-215 (227)
162 2xzz_A Protein-glutamine gamma 24.6 59 0.002 26.3 3.5 56 63-123 19-78 (102)
163 2p9r_A Alpha-2-M, alpha-2-macr 23.5 52 0.0018 26.2 3.1 70 218-292 13-84 (102)
164 2h7w_A Chagasin; beta-strands, 23.4 2.8E+02 0.0095 23.4 7.7 65 57-124 32-104 (131)
165 2aqm_A Superoxide dismutase [C 22.5 69 0.0024 28.1 3.8 25 436-460 29-53 (154)
166 1eqw_A Cu,Zn superoxide dismut 21.1 69 0.0023 28.2 3.5 26 435-460 28-53 (156)
167 1eso_A SOD, Cu, Zn superoxide 21.0 69 0.0024 28.1 3.5 26 435-460 28-53 (154)
168 1oal_A Superoxide dismutase; o 20.3 73 0.0025 27.8 3.5 26 435-460 25-50 (151)
169 2wyt_A Superoxide dismutase [C 20.2 1E+02 0.0035 26.9 4.4 22 438-459 29-50 (153)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=1.1e-101 Score=856.21 Aligned_cols=506 Identities=30% Similarity=0.530 Sum_probs=401.5
Q ss_pred ceEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-CCC
Q 007735 26 LFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-TNC 103 (591)
Q Consensus 26 ~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-tq~ 103 (591)
.+|+|+|+|++..+++||.++++|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++++++|+||+++ |||
T Consensus 2 ~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~ 81 (552)
T 1aoz_A 2 QIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQC 81 (552)
T ss_dssp CEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBC
T ss_pred eEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccC
Confidence 5799999999999999999999999999999999999999999999999998 99999999999999999999998 999
Q ss_pred ccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHHHHhhcC
Q 007735 104 PIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTLDAG 183 (591)
Q Consensus 104 ~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~ 183 (591)
+|+||++|+|+|++ +|+||||||||.+.|+++||+|+|||++++....|+ ..|+|++|+|+||++++...+...+...
T Consensus 82 ~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~ 159 (552)
T 1aoz_A 82 AINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSSK 159 (552)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTSS
T ss_pred CcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhcc
Confidence 99999999999999 799999999999999999999999999986555565 3468999999999998776654433322
Q ss_pred --CCCCCCceEEEcCcCCCCCCC-----------ccC-CCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEE
Q 007735 184 --KGLGMPDGVLINGKGPYQYNT-----------TLV-PDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLA 249 (591)
Q Consensus 184 --~~~~~~~~~lING~~~~~~~~-----------~~~-~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi 249 (591)
...+.++.++|||+..++|.. +.. ...+..+.++|++||+|||||||+|..+.+.|+|+||+|+||
T Consensus 160 ~~~~~~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi 239 (552)
T 1aoz_A 160 PIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVV 239 (552)
T ss_dssp SCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEE
T ss_pred cccCCCCCCeEEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEE
Confidence 223467899999999876632 111 112234589999999999999999999999999999999999
Q ss_pred eecCCceeeeeeeEEEEccccEEEEEEEeC-CCCCcceEEEEeecccccccCCCcceEEEEEecCCCCC--CCCCCCCCC
Q 007735 250 ETEGSYTVQQNYTSLDIHVGQSYSFLVTMD-QNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGK--ARGPLPEGP 326 (591)
Q Consensus 250 a~DG~~~~p~~~d~v~i~pGqR~dvlv~~~-~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~--~~~~~p~~p 326 (591)
|+||.+++|+.++++.|+|||||||+|+++ +++| +|||++....+. ..+....|+|+|.++... +..+.|..|
T Consensus 240 ~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g-~y~i~~~~~~~~---~~~~~~~ail~y~~~~~~~~p~~~~p~~p 315 (552)
T 1aoz_A 240 EADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSE-NYWVSVGTRARH---PNTPPGLTLLNYLPNSVSKLPTSPPPQTP 315 (552)
T ss_dssp EETTEEEEEEEESCEEECTTCEEEEEEECCSCTTC-CEEEEEEEESSC---CCSCCEEEEEEETTSCTTSCCSSCCCCCC
T ss_pred EECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCC-CEEEEEEcccCC---CCCccEEEEEEECCCCCCCCCCCCCCCCC
Confidence 999999999999999999999999999994 4567 999999876422 123567899999876421 111222222
Q ss_pred CCCcCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccc
Q 007735 327 NDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWF 406 (591)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~ 406 (591)
... +....... .+. .+....+.+.+ ..+++++.+..... ..++..+|+|||++|..|+.|+|.+.+.
T Consensus 316 ~~~-~~~~~~~~--~l~-~l~~~~~~~~~--------~~~~~~~~l~~~~~-~~~~~~~w~iNg~s~~~p~~P~L~~~~~ 382 (552)
T 1aoz_A 316 AWD-DFDRSKNF--TYR-ITAAMGSPKPP--------VKFNRRIFLLNTQN-VINGYVKWAINDVSLALPPTPYLGAMKY 382 (552)
T ss_dssp CTT-CHHHHHHH--HTT-CCBCTTCCCCC--------SSCSEEEEEEEEEE-EETTEEEEEETTEEECCCSSCHHHHHHT
T ss_pred ccc-cccccccc--ccc-ccccCCCCCCC--------CCCcEEEEEEEeec-cCCCeEEEEECCCccCCCCCCHHHHHhh
Confidence 110 11100000 000 01100011111 23567777665321 2345678999999999999999988777
Q ss_pred cccccccCCCCCCC-----------CCCCCCcceEEEeccCCcEEEEEEecCCC------cceeeeecCceEEEEEEcCC
Q 007735 407 KVKGAYKLDFPTKP-----------VTGPPRMETSVINGTYRGFMEVILQNNDT------KMHAYHMSGYAFFVVGMDYG 469 (591)
Q Consensus 407 ~~~g~~~~~~~~~p-----------~~~~~~~~~~v~~~~~g~~ve~vl~N~~~------~~HPfHlHG~~F~Vv~~g~g 469 (591)
++++.|..+++..+ .+...+.++.++.++.|++|||+|+|.+. +.||||||||+||||+++.|
T Consensus 383 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G 462 (552)
T 1aoz_A 383 NLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDG 462 (552)
T ss_dssp TCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEES
T ss_pred cCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccC
Confidence 66776664433221 11233456788899999999999999873 46999999999999999989
Q ss_pred CCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCCCCCCCCccc
Q 007735 470 EWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALF 549 (591)
Q Consensus 470 ~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~~~p~~~~~ 549 (591)
.|++.....||+.+|+|||||.|+|+||++|||++||||.|+|||||++|++.|||+.|.|... + ..++|++++.
T Consensus 463 ~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-~----~~~~P~~~~~ 537 (552)
T 1aoz_A 463 KFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-K----VGRIPTKALA 537 (552)
T ss_dssp SCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-G----CCCCCHHHHS
T ss_pred ccCcccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-h----hccCCcchhh
Confidence 8876445579999999999999999999999999999999999999999999999999987533 2 3568999999
Q ss_pred ccCcCC
Q 007735 550 CGALSH 555 (591)
Q Consensus 550 c~~~~~ 555 (591)
|+.+..
T Consensus 538 C~~~~~ 543 (552)
T 1aoz_A 538 CGGTAK 543 (552)
T ss_dssp SHHHHH
T ss_pred hhccCc
Confidence 998764
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=2.4e-99 Score=831.47 Aligned_cols=488 Identities=23% Similarity=0.329 Sum_probs=384.0
Q ss_pred CceEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-CC
Q 007735 25 DLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-TN 102 (591)
Q Consensus 25 ~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-tq 102 (591)
..+++|+|+|++.+++|||+++++|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||++|++++||||+++ ||
T Consensus 65 ~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vTq 144 (580)
T 3sqr_A 65 GVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQ 144 (580)
T ss_dssp CCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTTB
T ss_pred ceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCcccc
Confidence 45799999999999999999999999999999999999999999999999998 89999999999999999999998 99
Q ss_pred CccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCCCcc-eEEecccccCchHHHHHHhh
Q 007735 103 CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDI-TILIGDWYTRNHTALRKTLD 181 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~-~l~l~d~~~~~~~~~~~~~~ 181 (591)
|||+||++|+|+|++ +|+||||||||.+.|+++||+|+|||++++. .+ +|.|. +|+|+||+++...++.....
T Consensus 145 ~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~--~~---yD~d~~~l~l~Dw~~~~~~~~~~~~~ 218 (580)
T 3sqr_A 145 CPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPAT--AD---YDEDVGVIFLQDWAHESVFEIWDTAR 218 (580)
T ss_dssp CCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCS--SC---CSEEEEEEEEEEECSSCHHHHHHHHT
T ss_pred CCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCccc--CC---CCccceEEEEEEEecCCHHHHHHHHh
Confidence 999999999999999 5999999999999999999999999998754 23 48887 99999999998877654443
Q ss_pred cCCCCCCCceEEEcCcCCCCCCCc---cCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceee
Q 007735 182 AGKGLGMPDGVLINGKGPYQYNTT---LVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQ 258 (591)
Q Consensus 182 ~~~~~~~~~~~lING~~~~~~~~~---~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p 258 (591)
.+ ..+.++++||||++.++|... .+......+.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.+++|
T Consensus 219 ~~-~~~~~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~P 297 (580)
T 3sqr_A 219 LG-APPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVP 297 (580)
T ss_dssp TS-CCCCBSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEE
T ss_pred cc-CCCCCceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCccCCc
Confidence 32 246789999999998777421 11123456899999999999999999999999999999999999999999999
Q ss_pred eeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccccccc
Q 007735 259 QNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQ 338 (591)
Q Consensus 259 ~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~ 338 (591)
+.+++|.|+|||||||+|+++++++ +|||++.....+.....+....|||+|.++... .|..+...+. ..+.+.
T Consensus 298 ~~~~~l~i~pGqRydVlv~a~~~~g-~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~----~P~~~~~~~~-~~~~~~ 371 (580)
T 3sqr_A 298 YTTDTLLIGIGQRYDVIVEANAAAD-NYWIRGNWGTTCSTNNEAANATGILRYDSSSIA----NPTSVGTTPR-GTCEDE 371 (580)
T ss_dssp EEESSEEECTTCEEEEEEECCSCSS-EEEEECCCCTTTSCBTTGGGCEEEEESSTTCCC----CCCCCCCCCC-CCSCCS
T ss_pred eEeeEEEEccceEEEEEEEeCCCCC-eEEEEEecccccCccCCCCceEEEEEECCCCCC----CCCCCCCCcc-chhhcc
Confidence 9999999999999999999998888 999999876533211234578999999865421 1111110000 001111
Q ss_pred ccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeecc-CCCCchhhhccccccccccCCCC
Q 007735 339 ARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFV-NPSTPIRLADWFKVKGAYKLDFP 417 (591)
Q Consensus 339 ~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~-~p~~P~l~~~~~~~~g~~~~~~~ 417 (591)
...+|.+..+.+.|. ..+.+.++.+. .++..+|+|||++|. +++.|+|++.+. |. .++
T Consensus 372 ---~~~~L~P~~~~~~~~------~~~~~~~l~~~------~~~~~~w~iN~~s~~~~~~~P~L~~~~~---g~--~~~- 430 (580)
T 3sqr_A 372 ---PVASLVPHLALDVGG------YSLVDEQVSSA------FTNYFTWTINSSSLLLDWSSPTTLKIFN---NE--TIF- 430 (580)
T ss_dssp ---CGGGCCBSSCCBCCS------EEEEEEEEEEE------ESSSEEEEETTBCCCCCTTSCHHHHHHT---TC--CCC-
T ss_pred ---cccccccCCCCCCCC------ccceEEEEEec------cCCceeEEECCEecccCCCCCchhhhhc---CC--ccC-
Confidence 001233222222221 12233333331 345678999999997 578898876542 21 011
Q ss_pred CCCCCCCCCcceEEEecc----CCcEEEEEEecCC--CcceeeeecCceEEEEEEcCCCCCCCC-CCCCCCCCCCccceE
Q 007735 418 TKPVTGPPRMETSVINGT----YRGFMEVILQNND--TKMHAYHMSGYAFFVVGMDYGEWTDNS-RGTYNKWDGIARTTT 490 (591)
Q Consensus 418 ~~p~~~~~~~~~~v~~~~----~g~~ve~vl~N~~--~~~HPfHlHG~~F~Vv~~g~g~~~~~~-~~~~n~~~p~~rDTv 490 (591)
|. ..+++.++ .|++|||+|+|.+ .+.||||||||+||||++|.|.|++.. +..||+.||++|||+
T Consensus 431 --~~------~~~~~~~~~~~~~~~~VeiVi~n~~~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv 502 (580)
T 3sqr_A 431 --PT------EYNVVALEQTNANEEWVVYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVA 502 (580)
T ss_dssp --CG------GGCEEEECC----CCEEEEEEEECSSSCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEE
T ss_pred --CC------CcceeecccccCCCcEEEEEEeCCCccccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEE
Confidence 11 23444554 6999999999987 789999999999999999999998653 467999999999999
Q ss_pred EeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCCCCCCCCc-ccccCcCCC
Q 007735 491 QVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNA-LFCGALSHL 556 (591)
Q Consensus 491 ~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~~~p~~~-~~c~~~~~~ 556 (591)
.|+|+||++|||++||||+|+|||||++|++.||+..|.+ .+++..+ ..++|+.. ..|..|...
T Consensus 503 ~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e-~~~~i~~-~~~~~~~~~~~C~~~~~~ 567 (580)
T 3sqr_A 503 ALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVE-SQSSIAV-KMTDTAIFEDTCANWNAY 567 (580)
T ss_dssp EECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEE-SGGGCCC-CHHHHHHHHHHHHHHHHH
T ss_pred EeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEE-CHHHHhh-ccCCcHHHHHhhHHHhhh
Confidence 9999999999999999999999999999999999999876 4444332 22356654 578777553
No 3
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-97 Score=817.05 Aligned_cols=484 Identities=21% Similarity=0.316 Sum_probs=379.4
Q ss_pred ceEEEEEEEEEEEecCCC-eeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-CC
Q 007735 26 LFVYFDFEVSYITASPLG-VPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-TN 102 (591)
Q Consensus 26 ~~~~~~~~v~~~~~~~dG-~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-tq 102 (591)
.+++|+|+|++.+++||| .++++|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||++|++++||||+++ ||
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 378999999999999999 8999999999999999999999999999999999 99999999999999999999998 99
Q ss_pred CccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHHHHh-h
Q 007735 103 CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTL-D 181 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~-~ 181 (591)
|+|+||++|+|+|++++|+||||||||.+.|+.+||+|+|||++++. |+ .+|+|++|+|+||+++...++...+ .
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 99999999999999976999999999999999999999999999753 44 4589999999999999887765432 2
Q ss_pred c---CCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceee
Q 007735 182 A---GKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQ 258 (591)
Q Consensus 182 ~---~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p 258 (591)
. ....+.++.+||||+.. +.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.+++|
T Consensus 157 ~~~~~g~~~~~d~~liNG~~~--------------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P 222 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTMN--------------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEK 222 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBSS--------------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEE
T ss_pred cccCCCCCCCCceEEECCCCc--------------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccc
Confidence 1 22345789999999986 899999999999999999999999999999999999999999999
Q ss_pred eeeeEEEEccccEEEEEEEeCCCCCcceEEEEeeccccc---ccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccc
Q 007735 259 QNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNE---SQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFS 335 (591)
Q Consensus 259 ~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~---~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~ 335 (591)
..++++.|+|||||||+|++++.++++|||++....... ....+....++|+|.++... |..+... .....
T Consensus 223 ~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~-----p~~~~~~-~~~~~ 296 (534)
T 1zpu_A 223 NVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAAL-----PTQNYVD-SIDNF 296 (534)
T ss_dssp EEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCB-----CCCCCCS-CSSCS
T ss_pred cEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCC-----CCCCccc-ccccc
Confidence 999999999999999999998754349999997653211 11134567899999875421 1111000 00000
Q ss_pred cccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCC
Q 007735 336 MNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLD 415 (591)
Q Consensus 336 ~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~ 415 (591)
+++ ..+.+....+.+ ..+++++.+........++..+|+|||++|..|+.|+|+..+. .+.+.
T Consensus 297 ~~~-----~~l~p~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~--~~~~~-- 359 (534)
T 1zpu_A 297 LDD-----FYLQPYEKEAIY--------GEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLS--SGDQA-- 359 (534)
T ss_dssp CCG-----GGCCBSSCCCCC--------CSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTT--SGGGT--
T ss_pred ccc-----ccceeCCCCCCC--------CCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeecc--cCccc--
Confidence 111 011111111111 2345666665432212456678999999999999998876542 12221
Q ss_pred CCCCCCCCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCC----------CCCCCCCCCCCCCCCC
Q 007735 416 FPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYG----------EWTDNSRGTYNKWDGI 485 (591)
Q Consensus 416 ~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g----------~~~~~~~~~~n~~~p~ 485 (591)
..+... ..+++++.++.|++|||+|+|.+.+.||||||||+||||+++.+ .|++.....+ ..+|+
T Consensus 360 --~~~~~~--~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~-~~~p~ 434 (534)
T 1zpu_A 360 --NNSEIY--GSNTHTFILEKDEIVEIVLNNQDTGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAF-PEYPM 434 (534)
T ss_dssp --TCGGGG--CSSSCEEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCC-CSSCE
T ss_pred --CCCccc--CCCceEEEeCCCCEEEEEEeCCCCCCCCeEecCCceEEEeecCCccccccCcccccCccccccc-cCCCC
Confidence 111111 11356788999999999999999899999999999999999864 4443322223 56899
Q ss_pred ccceEEeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCC--CCCCCCcccccCcCCCC
Q 007735 486 ARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTE--FPIPDNALFCGALSHLQ 557 (591)
Q Consensus 486 ~rDTv~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~--~~~p~~~~~c~~~~~~~ 557 (591)
|||||.|+|++|++|||++||||.|+|||||++|++.|||..|.+. +++.. ++ .++|++...||...+.+
T Consensus 435 ~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~-~~~~~-~~~~~~~p~~~~~~C~~~~~~ 506 (534)
T 1zpu_A 435 RRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVED-PFGIQ-DAHSQQLSENHLEVCQSCSVA 506 (534)
T ss_dssp EESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEEC-HHHHH-HCGGGSCCHHHHHHHHHTTCC
T ss_pred eeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEEC-ccccc-cccccCCChhHhhhhhccCCC
Confidence 9999999999999999999999999999999999999999999775 33222 22 56787776666555543
No 4
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=1.3e-96 Score=800.92 Aligned_cols=479 Identities=26% Similarity=0.405 Sum_probs=371.6
Q ss_pred EEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCC-----CceeeecCccCCCCCCCCCCCC-C
Q 007735 28 VYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDE-----SLLIHWSGIQQRRSSWQDGLLG-T 101 (591)
Q Consensus 28 ~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~-----~~siH~HG~~~~~~~~~DGv~~-t 101 (591)
..|+|+|++..++|||+++++|+|||++|||+||+++||+|+|+|+|+|++ +++|||||++|++++|+||+++ |
T Consensus 4 ~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 83 (499)
T 3pxl_A 4 PVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFIN 83 (499)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred ceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 479999999999999999999999999999999999999999999999985 7999999999999999999998 9
Q ss_pred CCccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCC-CCCCCCCCCcceEEecccccCchHHHHHHh
Q 007735 102 NCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAII-PIPFDTPDGDITILIGDWYTRNHTALRKTL 180 (591)
Q Consensus 102 q~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~ 180 (591)
||+|+||++|+|+|++++|+||||||||.+.|+.+||+|+|||+++.+. ..+|+..++|++|+++|||++....
T Consensus 84 q~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~----- 158 (499)
T 3pxl_A 84 QCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL----- 158 (499)
T ss_dssp BCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT-----
T ss_pred cCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc-----
Confidence 9999999999999999889999999999999999999999999987542 1234444567899999999985432
Q ss_pred hcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeee
Q 007735 181 DAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQN 260 (591)
Q Consensus 181 ~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~ 260 (591)
.+.....++++||||++.+.|. .....+.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.+++|+.
T Consensus 159 -~~~~p~~~d~~liNG~~~~~~~-----~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~ 232 (499)
T 3pxl_A 159 -GPRFPGGADATLINGKGRAPSD-----SVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLE 232 (499)
T ss_dssp -SCSSCSSCSEEEETTBCCCTTC-----TTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEE
T ss_pred -ccCCCCCCcEEEECCCCcCCCC-----CCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceE
Confidence 1223347899999999876652 1234689999999999999999999999999999999999999999999999
Q ss_pred eeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccccccccc
Q 007735 261 YTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQAR 340 (591)
Q Consensus 261 ~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 340 (591)
+++|.|+|||||||+|++++++| +|||++........ ..+....|||+|.++.... |....+. ... .+.+
T Consensus 233 ~~~l~i~pGqR~dvlv~~~~~~g-~y~i~a~~~~~~~~-~~~~~~~ail~Y~~~~~~~--p~~~~~~---~~~-~~~~-- 302 (499)
T 3pxl_A 233 VDSIQIFAAQRYSFVLDANQAVD-NYWIRANPNFGNVG-FDGGINSAILRYDGAPAVE--PTTNQTT---SVK-PLNE-- 302 (499)
T ss_dssp ESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTSCSSC--CCCCCCC---CSS-BCCG--
T ss_pred eeeEEECCCcEEEEEEECCCCCc-eEEEEEecccCccc-cCCCceEEEEEeCCCCCCC--CCCCCCC---CCc-cccc--
Confidence 99999999999999999998878 99999987533221 1223457999998764211 1000000 000 0111
Q ss_pred ccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCC
Q 007735 341 SIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKP 420 (591)
Q Consensus 341 ~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p 420 (591)
.+|.+....+.|... ....+++++.+... .++ .+|+|||++|..|+.|+|++.+. +.+...
T Consensus 303 ---~~L~p~~~~~~p~~~---~~~~~d~~~~l~~~----~~~-~~w~iNg~s~~~~~~P~L~~~~~---g~~~~~----- 363 (499)
T 3pxl_A 303 ---VDLHPLVSTPVPGAP---SSGGVDKAINMAFN----FNG-SNFFINGASFVPPTVPVLLQILS---GAQTAQ----- 363 (499)
T ss_dssp ---GGCCBSSCCCCSSCS---STTCSSEEEECCEE----ECS-SCEEETTBCCCCCSSCHHHHHHT---TCCSTT-----
T ss_pred ---ccccccccccCCCcc---cCCCCcEEEEEEEE----ecC-cEEEEcCEecCCCCCchhhhhhc---CCcccc-----
Confidence 122222111111100 01134566655542 222 37999999999999998876542 222110
Q ss_pred CCCCCCcceEEEeccCCcEEEEEEe---cCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCC---
Q 007735 421 VTGPPRMETSVINGTYRGFMEVILQ---NNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYP--- 494 (591)
Q Consensus 421 ~~~~~~~~~~v~~~~~g~~ve~vl~---N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp--- 494 (591)
......+++.++.|++|||+|+ |.+.+.||||||||+||||++++ ...+|+.+|+||||+.|++
T Consensus 364 ---~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g-------~~~~n~~~P~~rDtv~v~~~~p 433 (499)
T 3pxl_A 364 ---DLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAG-------STVYNYDNPIFRDVVSTGTPAA 433 (499)
T ss_dssp ---TSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTT-------CCCCCSSSCCEESEEECCCGGG
T ss_pred ---ccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccC-------CcccccCCCCccceEEcCCcCC
Confidence 0011346788999999999999 56678999999999999998742 2358999999999999997
Q ss_pred CcEEEEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCCCCCCCC-cccccCcCCCCC
Q 007735 495 GAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDN-ALFCGALSHLQK 558 (591)
Q Consensus 495 ~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~~~p~~-~~~c~~~~~~~~ 558 (591)
|+|++|||++||||.|+|||||++|++.||++.+ ++.|++..+. .++|+. ...|..|...+.
T Consensus 434 g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~-~e~~~~~~~~-~~~p~~~~~~C~~~~~~~~ 496 (499)
T 3pxl_A 434 GDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVM-AEDTPDVKAV-NPVPQAWSDLCPTYDALDP 496 (499)
T ss_dssp TCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEE-EESGGGHHHH-SCCCHHHHTHHHHHHTSCG
T ss_pred CcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEE-EEChhHhccc-cCCCHHHHHhhhHhhccCc
Confidence 9999999999999999999999999999999888 5666654322 345655 468888876543
No 5
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=1.3e-96 Score=800.81 Aligned_cols=478 Identities=24% Similarity=0.358 Sum_probs=368.5
Q ss_pred EEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCC-----CceeeecCccCCCCCCCCCCCC-C
Q 007735 28 VYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDE-----SLLIHWSGIQQRRSSWQDGLLG-T 101 (591)
Q Consensus 28 ~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~-----~~siH~HG~~~~~~~~~DGv~~-t 101 (591)
..|+|+|++.+++|||+++++|+|||++|||+||+++||+|+|+|+|+|++ +++|||||++|++++|+||+++ |
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 479999999999999999999999999999999999999999999999985 7999999999999999999998 9
Q ss_pred CCccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCC-CCCCCCCCCcceEEecccccCchHHHHHHh
Q 007735 102 NCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAII-PIPFDTPDGDITILIGDWYTRNHTALRKTL 180 (591)
Q Consensus 102 q~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~ 180 (591)
||||+||++|+|+|++++|+||||||||.+.|+.+||+|+|||+++.+. ..+|+..++|++|+++|||++....+
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~---- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM---- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS----
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh----
Confidence 9999999999999999889999999999999999999999999987542 12344445678999999999865432
Q ss_pred hcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeee
Q 007735 181 DAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQN 260 (591)
Q Consensus 181 ~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~ 260 (591)
.+.....+|++||||++.+.|.. .....+.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.+++|+.
T Consensus 161 -~~~~p~~~d~~liNG~g~~~~~~----~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~ 235 (495)
T 3t6v_A 161 -GAGGAITADSTLIDGLGRTHVNV----AAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELT 235 (495)
T ss_dssp -CSSSCCCCSEEEETTBCCBSSSC----CCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEE
T ss_pred -ccCCCCCCcEEEECCcCcCCCCc----ccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEE
Confidence 12223478999999998765522 1234689999999999999999999999999999999999999999999999
Q ss_pred eeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccccccccc
Q 007735 261 YTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQAR 340 (591)
Q Consensus 261 ~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 340 (591)
++++.|+|||||||+|++++++| +|||++........ ..+....|||+|.++.... |....+.. ... .+.+
T Consensus 236 ~~~l~i~pGqR~dvlv~~~~~~g-~y~i~a~~~~~~~~-~~~~~~~ail~Y~~~~~~~--p~~~~~~~--~~~-~~~~-- 306 (495)
T 3t6v_A 236 VDEIQIFAAQRYSFVLNANQPVG-NYWIRANPNSGGEG-FDGGINSAILRYDGATTAD--PVTVASTV--HTK-CLIE-- 306 (495)
T ss_dssp ESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTSCSSC--CCCCCCSS--CSS-BCCG--
T ss_pred eeeEEEcCceEEEEEEECCCCCc-eEEEEEecccCccc-cCCCceEEEEEECCCCCCC--CCCCCCCC--Ccc-cccc--
Confidence 99999999999999999998878 99999987543221 1223457999998754211 11111110 000 0111
Q ss_pred ccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCC
Q 007735 341 SIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKP 420 (591)
Q Consensus 341 ~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p 420 (591)
.+|.+....+.|... . ...+++++.+... .++ .+|+|||++|..|+.|+|++.+. +.+...
T Consensus 307 ---~~L~p~~~~~~p~~~-~--~~~~d~~~~l~~~----~~~-~~w~iNg~s~~~~~~P~L~~~~~---g~~~~~----- 367 (495)
T 3t6v_A 307 ---TDLHPLSRNGVPGNP-H--QGGADCNLNLSLG----FAC-GNFVINGVSFTPPTVPVLLQICS---GANTAA----- 367 (495)
T ss_dssp ---GGCCBSSCCCCSSCS-S--TTCSSEEEECCEE----EET-TEEEETTBCCCCCSSCHHHHHHT---TCCSST-----
T ss_pred ---ccccccccccCCCcc-C--CCCCcEEEEEEEE----ecC-cEEEEcCEecCCCCCcchhhhhc---CCcCcc-----
Confidence 122222111111100 0 1124555555432 122 27999999999999998876542 222110
Q ss_pred CCCCCCcceEEEeccCCcEEEEEEe-cCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCC-CcEE
Q 007735 421 VTGPPRMETSVINGTYRGFMEVILQ-NNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYP-GAWT 498 (591)
Q Consensus 421 ~~~~~~~~~~v~~~~~g~~ve~vl~-N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp-~g~~ 498 (591)
......+++.++.|++|||+|+ |.+.+.||||||||+|+||++++ ...+|+.+|+||||+.|++ |+|+
T Consensus 368 ---~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~F~vl~~~g-------~~~~n~~~P~~rDtv~v~~~g~~~ 437 (495)
T 3t6v_A 368 ---DLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVSESAS-------NSTSNYDDPIWRDVVSIGGVGDNV 437 (495)
T ss_dssp ---TSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTCCEEEEECTT-------CCCCCSSSCCEESEEECCSTTCEE
T ss_pred ---cccCCcceEEecCCCEEEEEEccCCCCCCcceeecCCcEEEEecCC-------CCCcccCCCCCccEEEcCCCCcEE
Confidence 0011345788999999999998 66778999999999999998742 2358999999999999997 8999
Q ss_pred EEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCCCCCCCCc-ccccCcC
Q 007735 499 AILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNA-LFCGALS 554 (591)
Q Consensus 499 ~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~~~p~~~-~~c~~~~ 554 (591)
+|||++||||.|+|||||++|++.||++.+ ++.|++..+ ..++|+.. ..|..|.
T Consensus 438 ~irf~adnPG~W~~HCHi~~H~~~Gm~~~~-~e~~~~~~~-~~~~p~~~~~~C~~~~ 492 (495)
T 3t6v_A 438 TIRFCTDNPGPWFLHCHIDWHLDAGFAIVF-AEDIPNTAS-ANPVPEAWSNLCPSYD 492 (495)
T ss_dssp EEEEECCSCEEEEEEESCHHHHHTTCEEEE-EETHHHHHH-HCCCCHHHHHHHHHHH
T ss_pred EEEEEcCCCeeEEEEecchhHhhcCCeEEE-EEChhHhcc-ccCCCHHHHHHhhHhh
Confidence 999999999999999999999999999888 455554432 23456664 5776553
No 6
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=6.2e-96 Score=803.80 Aligned_cols=485 Identities=23% Similarity=0.322 Sum_probs=373.1
Q ss_pred CCceEEEEEEEEEEEecCCCe-eeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-----CCceeeecCccCCCCCCCCC
Q 007735 24 ADLFVYFDFEVSYITASPLGV-PQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-----ESLLIHWSGIQQRRSSWQDG 97 (591)
Q Consensus 24 ~~~~~~~~~~v~~~~~~~dG~-~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-----~~~siH~HG~~~~~~~~~DG 97 (591)
++...+|+|++++.++++||+ ++++|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++++++|+||
T Consensus 20 ~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DG 99 (521)
T 1v10_A 20 LAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDG 99 (521)
T ss_dssp --CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSC
T ss_pred cccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCC
Confidence 344578999999999999999 999999999999999999999999999999999 99999999999998999999
Q ss_pred CCC-CCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCC-CCCCCCCCCcceEEecccccCchHH
Q 007735 98 LLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAII-PIPFDTPDGDITILIGDWYTRNHTA 175 (591)
Q Consensus 98 v~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~p~~~~d~e~~l~l~d~~~~~~~~ 175 (591)
+++ |||+|+||++|+|+|++++++||||||||.+.|+++||+|+|||+++++. +.+|+..++|++|+|+||+++...+
T Consensus 100 v~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~~ 179 (521)
T 1v10_A 100 PAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTV 179 (521)
T ss_dssp CBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC-
T ss_pred CcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHHH
Confidence 998 99999999999999997789999999999999999999999999987532 2234434579999999999997766
Q ss_pred HHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCc
Q 007735 176 LRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSY 255 (591)
Q Consensus 176 ~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~ 255 (591)
+.. ..+...+.+|.++|||+..+.|.. .....+.++|++||+|||||||+|..+.+.|+|+||+|+||++||.+
T Consensus 180 ~~~--~~~~~~~~~d~~liNG~~~~~~~~----~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~ 253 (521)
T 1v10_A 180 LFP--NPNKAPPAPDTTLINGLGRNSANP----SAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVS 253 (521)
T ss_dssp --------CCCSCCSEEEETTBCCCSSCG----GGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEE
T ss_pred Hhh--ccCCCCCCCCEEEECCcccCCCCC----CCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCcc
Confidence 542 222334568999999999866531 12345899999999999999999999999999999999999999999
Q ss_pred eeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccc
Q 007735 256 TVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFS 335 (591)
Q Consensus 256 ~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~ 335 (591)
++|+.++++.|+|||||||+|++++++| +|||++........ .......++|+|.++.... |.+..+.. ..
T Consensus 254 ~~p~~~~~l~l~pgqR~dvlv~~~~~~g-~y~i~~~~~~~~~~-~~~~~~~ail~y~~~~~~~--p~~~~~~~-----~~ 324 (521)
T 1v10_A 254 HQPLTVDSLTIFAGQRYSVVVEANQAVG-NYWIRANPSNGRNG-FTGGINSAIFRYQGAAVAE--PTTSQNSG-----TA 324 (521)
T ss_dssp EEEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTCCSCC--CCCCCCCS-----CB
T ss_pred ccceeeeeEEEcccceEEEEEEcCCCCC-ceeeeecccccccc-CCCCceeEEEEECCCCCCC--CCCCCCcc-----cc
Confidence 9999999999999999999999998778 99999987542211 1112346999998764211 11100000 00
Q ss_pred cccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCe-eEEEEcCeeccCCCCchhhhccccccccccC
Q 007735 336 MNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGK-RRATLSGISFVNPSTPIRLADWFKVKGAYKL 414 (591)
Q Consensus 336 ~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~-~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~ 414 (591)
+++ .++.+....+.|.... ....++++.+... .++. .+|+|||++|..+..|++++.+. +.+..
T Consensus 325 ~~~-----~~l~p~~~~~~p~~~~---~~~~~~~~~l~~~----~~~~~~~~~iNg~~~~~~~~P~l~~~~~---g~~~~ 389 (521)
T 1v10_A 325 LNE-----ANLIPLINPGAPGNPV---PGGADINLNLRIG----RNATTADFTINGAPFIPPTVPVLLQILS---GVTNP 389 (521)
T ss_dssp CCG-----GGCCBSSCCCCSSCSS---TTCSSEEEECCEE----CCSSSSCCEESSCCCCCCSSCHHHHHHH---TCCCG
T ss_pred cch-----hhcccCCcccCCCccc---CCcceEEEEEEEe----cCCceeEEEECCCcccCCCCchhhhhhc---CCccc
Confidence 111 1122211111221110 0123455554431 1232 47999999999888898766542 22110
Q ss_pred CCCCCCCCCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEe-C
Q 007735 415 DFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQV-Y 493 (591)
Q Consensus 415 ~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~V-p 493 (591)
. ..+.+++++.++.|++|||+++| .+.||||||||+||||+++.+. .+|+.+|.|||||.| +
T Consensus 390 ~--------~~~~~~~~~~v~~g~~vei~l~N--~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~p 452 (521)
T 1v10_A 390 N--------DLLPGGAVISLPANQVIEISIPG--GGNHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGG 452 (521)
T ss_dssp G--------GSSSTTTEEEECTTCEEEEEEEC--CBSCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEECCB
T ss_pred c--------cCCCCceEEEecCCCEEEEEEcC--CCCCCEEEccceEEEEecCCCC-------ccccCCCCeeeeEEeCC
Confidence 0 01124567889999999999999 7899999999999999997652 478899999999999 8
Q ss_pred CCcEEEEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCCCCCCC-CcccccCcCCCC
Q 007735 494 PGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPD-NALFCGALSHLQ 557 (591)
Q Consensus 494 p~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~~~p~-~~~~c~~~~~~~ 557 (591)
|++|++|||++||||.|+|||||++|++.|||..+.|...+ .. +..++|+ +...|..|....
T Consensus 453 ~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~-~~-~~~~~p~~~~~~C~~~~~~~ 515 (521)
T 1v10_A 453 GGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPN-IP-IANAISPAWDDLCPKYNANN 515 (521)
T ss_dssp SSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGG-HH-HHSCCCHHHHTHHHHHTTCC
T ss_pred CCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcc-hh-hccCCChHHhhhchhhhccC
Confidence 99999999999999999999999999999999999885443 21 2344564 578999987754
No 7
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=9.9e-94 Score=783.72 Aligned_cols=476 Identities=26% Similarity=0.400 Sum_probs=369.5
Q ss_pred EEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-----CCceeeecCccCCCCCCCCCCCC-CC
Q 007735 29 YFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-----ESLLIHWSGIQQRRSSWQDGLLG-TN 102 (591)
Q Consensus 29 ~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-----~~~siH~HG~~~~~~~~~DGv~~-tq 102 (591)
.|+|++++..+++||+++++|+|||++ ||+||+++||+|+|+|+|+|+ ++++|||||+++++++++||+++ ||
T Consensus 6 ~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq 84 (503)
T 1hfu_A 6 VDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQ 84 (503)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred eEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCccccc
Confidence 699999999999999999999999999 999999999999999999999 99999999999998999999998 99
Q ss_pred CccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCC-CCCCCCCCCcceEEecccccCchHHHHHHhh
Q 007735 103 CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAII-PIPFDTPDGDITILIGDWYTRNHTALRKTLD 181 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~~ 181 (591)
|+|+||++|+|+|++++++||||||||.+.|+++||+|+|||+++.+. +.+|+..++|++|+|+||+++...++..
T Consensus 85 ~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~~--- 161 (503)
T 1hfu_A 85 CPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQG--- 161 (503)
T ss_dssp CCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC----
T ss_pred CCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhcC---
Confidence 999999999999997789999999999999999999999999987532 2334333479999999999987665321
Q ss_pred cCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeeee
Q 007735 182 AGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNY 261 (591)
Q Consensus 182 ~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~ 261 (591)
.+.++.++|||+..+.|. .....+.++|++||+|||||||+|..+.+.|+|+||+|+||++||.+++|+.+
T Consensus 162 ----~~~~d~~liNG~~~~~~~-----~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~ 232 (503)
T 1hfu_A 162 ----AAQPDATLINGKGRYVGG-----PAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTV 232 (503)
T ss_dssp ------CCSEEEETTBCCBTTC-----CCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEE
T ss_pred ----CCCCCEEEECcccccCCC-----CCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCcccccccc
Confidence 146899999999986652 12345899999999999999999999999999999999999999999999999
Q ss_pred eEEEEccccEEEEEEEeCCCCCcceEEEEeecccccc---cCCCcceEEEEEecCCCCCCCCCCCC-CCCCCcCcccccc
Q 007735 262 TSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNES---QWKRVTGVAILHYTNSKGKARGPLPE-GPNDEFDKTFSMN 337 (591)
Q Consensus 262 d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~p~-~p~~~~~~~~~~~ 337 (591)
+++.|+|||||||+|++++++| +|||++........ ........++|+|.++.... |... .|.. ..++
T Consensus 233 ~~l~l~pgeR~dvlv~~~~~~g-~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~--p~~~~~~~~-----~~l~ 304 (503)
T 1hfu_A 233 DRLQIFTGQRYSFVLDANQPVD-NYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANAD--PTTSANPNP-----AQLN 304 (503)
T ss_dssp SBEEECTTCEEEEEEECCSCSS-EEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSC--CCCCCCSSC-----CBCC
T ss_pred CeEEEcccceEEEEEEcCCCcc-ceeeeeccccCCcccccccCCCceEEEEEECCCCCCC--CCCCCCCcc-----CCCc
Confidence 9999999999999999998778 89999986532211 01122346999998764211 1110 1110 0111
Q ss_pred cccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCC
Q 007735 338 QARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFP 417 (591)
Q Consensus 338 ~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~ 417 (591)
. .++.+....+.|.... ....++++.+... .++. .|+|||++|..+..|++++.+. +.+...
T Consensus 305 ~-----~~l~p~~~~~~p~~~~---~~~~~~~~~l~~~----~~~~-~~~iNg~~~~~~~~P~l~~~~~---g~~~~~-- 366 (503)
T 1hfu_A 305 E-----ADLHALIDPAAPGIPT---PGAADVNLRFQLG----FSGG-RFTINGTAYESPSVPTLLQIMS---GAQSAN-- 366 (503)
T ss_dssp G-----GGCBBSSSCSCSSCSS---TTCSSEEEECCEE----EETT-EEEETTBCCCCCSSCHHHHHHT---TCCSGG--
T ss_pred c-----ccccccCccCCCCccc---CCcceEEEEEEee----ccCc-eEEECCCccCCCCCcchhhhhc---CCcccc--
Confidence 1 1122211111221110 0123344444321 1222 7999999999888898776542 222100
Q ss_pred CCCCCCCCCcceEEEeccCCcEEEEEEec-CCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEe-CCC
Q 007735 418 TKPVTGPPRMETSVINGTYRGFMEVILQN-NDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQV-YPG 495 (591)
Q Consensus 418 ~~p~~~~~~~~~~v~~~~~g~~ve~vl~N-~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~V-pp~ 495 (591)
..+.+++++.++.|++|||+++| .+.+.||||||||+||||+++.+. .+|+.+|.|||||.| +|+
T Consensus 367 ------~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~ppg 433 (503)
T 1hfu_A 367 ------DLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTG 433 (503)
T ss_dssp ------GSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCC-------CCCCSSBCEESEEECCSTT
T ss_pred ------cCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCC-------ccccCCCCeeeeEEecCCC
Confidence 11124577889999999999995 457899999999999999997652 478889999999999 999
Q ss_pred cEEEEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCCCCCC-CCcccccCcCCCCC
Q 007735 496 AWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIP-DNALFCGALSHLQK 558 (591)
Q Consensus 496 g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~~~p-~~~~~c~~~~~~~~ 558 (591)
+|++|||++||||.|+|||||++|++.|||..+.|...+ .. +..++| ++...|..|...+.
T Consensus 434 ~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~-~~-~~~~~p~~~~~~C~~~~~~~~ 495 (503)
T 1hfu_A 434 DEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMAN-TV-DANNPPVEWAQLCEIYDDLPP 495 (503)
T ss_dssp CEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHH-HH-HHCCCCHHHHHHHHHHHTCCH
T ss_pred ceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchh-hh-hccCCChHHhhhccchhhcCC
Confidence 999999999999999999999999999999999885433 21 234456 45789998877643
No 8
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=2.3e-92 Score=781.12 Aligned_cols=488 Identities=23% Similarity=0.331 Sum_probs=373.4
Q ss_pred CCceEEEEEEEEEEE--ecCCCee-eEEEEECCCCCCCcEEeeCCCEEEEEEEECC-CCCceeeecCccCCCCCCCCCCC
Q 007735 24 ADLFVYFDFEVSYIT--ASPLGVP-QQVIAINGKFPGPTINVTTNNNVVVNVRNKL-DESLLIHWSGIQQRRSSWQDGLL 99 (591)
Q Consensus 24 ~~~~~~~~~~v~~~~--~~~dG~~-~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l-~~~~siH~HG~~~~~~~~~DGv~ 99 (591)
...+++|+|++++.+ +.+||++ +++|+|||++|||+||+++||+|+|+|+|+| +++++|||||+++++++++||++
T Consensus 30 ~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~ 109 (559)
T 2q9o_A 30 TGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGAN 109 (559)
T ss_dssp CCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCB
T ss_pred CCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCC
Confidence 455799999999999 8999999 9999999999999999999999999999999 68999999999999899999999
Q ss_pred C-CCCccCC-CCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCCCcc-eEEecccccCchHHH
Q 007735 100 G-TNCPIPP-KWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDI-TILIGDWYTRNHTAL 176 (591)
Q Consensus 100 ~-tq~~I~P-G~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~-~l~l~d~~~~~~~~~ 176 (591)
+ |||+|+| |++|+|+|++ +|+||||||||.+.|+++||+|+|||++++. .+ +|.|. +|+|+||+++...++
T Consensus 110 ~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~--~~---~d~d~~~l~l~Dw~~~~~~~~ 183 (559)
T 2q9o_A 110 GVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPAS--LP---YDIDLGVFPITDYYYRAADDL 183 (559)
T ss_dssp TTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCS--SC---CSEEEEEEEEEEECSSCHHHH
T ss_pred ccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCc--CC---CcccceEEEEeccccCCHHHH
Confidence 8 9999999 9999999999 5899999999999999999999999998754 23 47887 999999999987776
Q ss_pred HHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCce
Q 007735 177 RKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYT 256 (591)
Q Consensus 177 ~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~ 256 (591)
..... ....+.++.++|||+..+.|. .....+.++|++||+|||||||+|..+.+.|+|+||+|+||++||.++
T Consensus 184 ~~~~~-~~~~~~~d~~liNG~~~~~~~-----~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~ 257 (559)
T 2q9o_A 184 VHFTQ-NNAPPFSDNVLINGTAVNPNT-----GEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPV 257 (559)
T ss_dssp HHHHT-TSCCCCBSEEEETTBCBCTTT-----CCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEE
T ss_pred hhhhh-cCCCCccceeEECCccccCcC-----CCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCccc
Confidence 43222 223456899999999976542 123468999999999999999999999999999999999999999999
Q ss_pred eeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEee--cccccccCCCcceEEEEEecCCCCCCCCCCCCCCCC-CcCcc
Q 007735 257 VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASA--RFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPND-EFDKT 333 (591)
Q Consensus 257 ~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~--~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~-~~~~~ 333 (591)
+|+.++++.|+|||||||+|++++.+| +|||++.. ..... ...+....++|+|.++... +|..+.. ..+.
T Consensus 258 ~p~~~~~l~l~pgeR~dvlv~~~~~~g-~y~i~a~~~~~~~~~-~~~~~~~~ail~y~~~~~~----~P~~~~~~~~~~- 330 (559)
T 2q9o_A 258 NAMTVDSLFLAVGQRYDVVIDASRAPD-NYWFNVTFGGQAACG-GSLNPHPAAIFHYAGAPGG----LPTDEGTPPVDH- 330 (559)
T ss_dssp EEEEESCEEECTTCEEEEEEECCSCSS-EEEEEEECCGGGTTC-CBSSSCCEEEEEETTSCCS----CCCCCCCCCCCC-
T ss_pred CceEeCeEEEccEEEEEEEEECCCCCC-cEEEEEEeccccccC-CCCCCceeEEEEECCCCCC----CCCCCCCcCCCc-
Confidence 999999999999999999999998778 99999987 32211 1123456899999875421 1111100 0010
Q ss_pred cccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccC-CCCchhhhccccccccc
Q 007735 334 FSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVN-PSTPIRLADWFKVKGAY 412 (591)
Q Consensus 334 ~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~-p~~P~l~~~~~~~~g~~ 412 (591)
.++++ ..+.+..+.+.|...+. ...++++.+.... ...+...|+|||++|.. ++.|+|.+... +..
T Consensus 331 ~~~~~-----~~l~p~~~~~~p~~~~~---~~~~~~~~~~~~~--~~~~~~~~~iNg~s~~~~~~~P~L~~~~~---g~~ 397 (559)
T 2q9o_A 331 QCLDT-----LDVRPVVPRSVPVNSFV---KRPDNTLPVALDL--TGTPLFVWKVNGSDINVDWGKPIIDYILT---GNT 397 (559)
T ss_dssp TTCCC-----SCCCBSSCCBCCCTTCC---CCGGGEEEEEEEC--SSSSSCEEEETTBCCCCCTTSCHHHHHHH---TCC
T ss_pred ccccc-----cccccCCCCCCCCcccc---cceeEEEEEEeec--CCCceEEEEECCEecccCCCCCcHhHhhc---CCc
Confidence 01111 11222111112221111 1112333333211 12345789999999964 56787755432 110
Q ss_pred cCCCCCCCCCCCCCcceEEEeccC-CcEEEEEEecCC----CcceeeeecCceEEEEEEcC---------CCCCCC-CCC
Q 007735 413 KLDFPTKPVTGPPRMETSVINGTY-RGFMEVILQNND----TKMHAYHMSGYAFFVVGMDY---------GEWTDN-SRG 477 (591)
Q Consensus 413 ~~~~~~~p~~~~~~~~~~v~~~~~-g~~ve~vl~N~~----~~~HPfHlHG~~F~Vv~~g~---------g~~~~~-~~~ 477 (591)
++ | .+.+++.++. +++++|+++|.+ .+.||||||||+||||+++. |.|++. +..
T Consensus 398 --~~---~------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~ 466 (559)
T 2q9o_A 398 --SY---P------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLA 466 (559)
T ss_dssp --CC---C------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGG
T ss_pred --cC---C------CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccccccccccccccCcccccc
Confidence 01 1 1345666654 678889999976 68999999999999999987 666542 134
Q ss_pred CCCCCCCCccceEEeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEecCCCCCCCCCCC--CC-CcccccCcC
Q 007735 478 TYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPI--PD-NALFCGALS 554 (591)
Q Consensus 478 ~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~~~~~~~~~--p~-~~~~c~~~~ 554 (591)
.+|+.+|+|||||.|++++|++|||++||||.|+|||||++|++.|||..|.|... +.. +..++ |+ ....|..|.
T Consensus 467 ~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~-~~~-~~~~~~~p~~~~~~C~~~~ 544 (559)
T 2q9o_A 467 RLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPA-DLR-QRISQEDEDDFNRVCDEWR 544 (559)
T ss_dssp GCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH-HHG-GGCCHHHHHHHHHHHHHHH
T ss_pred ccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcc-hhh-hccccCCchhhhhhccccc
Confidence 68999999999999999999999999999999999999999999999999987533 222 22333 54 457998887
Q ss_pred CC
Q 007735 555 HL 556 (591)
Q Consensus 555 ~~ 556 (591)
..
T Consensus 545 ~~ 546 (559)
T 2q9o_A 545 AY 546 (559)
T ss_dssp HH
T ss_pred cc
Confidence 64
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=1.4e-84 Score=700.72 Aligned_cols=407 Identities=20% Similarity=0.280 Sum_probs=325.2
Q ss_pred cCCceEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCC
Q 007735 23 AADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN 102 (591)
Q Consensus 23 ~~~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq 102 (591)
+.+.+++|+|++++..+.+||.++++|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++. +++||++
T Consensus 12 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~--- 86 (439)
T 2xu9_A 12 SQGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPIS--PKVDDPF--- 86 (439)
T ss_dssp CBTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCC--TTTSCTT---
T ss_pred cCCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCC--ccccCCc---
Confidence 45567999999999999999999999999999999999999999999999999999999999999875 4899987
Q ss_pred CccCCCCcEEEEEEeC-CceeeeEEecCh----hhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHH
Q 007735 103 CPIPPKWNWTYQFQVK-DQVGSFFYFPSL----HFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALR 177 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~-~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~ 177 (591)
+.|+||++|+|+|+++ +++||||||||. +.|+.+||+|+|||+++.+. .|...+++|++|+++||+++... +.
T Consensus 87 ~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~-~~~~~~~~e~~l~l~D~~~~~~~-~~ 164 (439)
T 2xu9_A 87 LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDA-IPELREAEEHLLVLKDLALQGGR-PA 164 (439)
T ss_dssp CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGG-SHHHHTSEEEEEEEEEECEETTE-EC
T ss_pred ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCcccc-CccCCCCCcEEEEEEeeeeCCCC-cC
Confidence 6799999999999986 589999999996 57999999999999986532 12113478999999999997531 00
Q ss_pred HHhh-cCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCce
Q 007735 178 KTLD-AGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYT 256 (591)
Q Consensus 178 ~~~~-~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~ 256 (591)
.... .......++.++|||+.. |.++|++| +|||||||+|..+.+.|+|+||+|+||++||.++
T Consensus 165 ~~~~~~~~~g~~~~~~~iNG~~~--------------p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~ 229 (439)
T 2xu9_A 165 PHTPMDWMNGKEGDLVLVNGALR--------------PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFL 229 (439)
T ss_dssp CCCHHHHHHCCCCSEEEETTEES--------------CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEE
T ss_pred CCCccccccCCCCCEEEECCccC--------------CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCC
Confidence 0000 000112468999999986 89999999 9999999999999999999999999999999997
Q ss_pred -eeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccc--------------cCCCcceEEEEEecCCCCCCCCC
Q 007735 257 -VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNES--------------QWKRVTGVAILHYTNSKGKARGP 321 (591)
Q Consensus 257 -~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~--------------~~~~~~~~ail~y~~~~~~~~~~ 321 (591)
+|+.++++.|+|||||||+|++++ +| +|+|++........ ........++++|.++.. ..+
T Consensus 230 ~~p~~~~~l~l~pgeR~dv~v~~~~-~G-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~ 305 (439)
T 2xu9_A 230 EEPLEVSELLLAPGERAEVLVRLRK-EG-RFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPK--PLP 305 (439)
T ss_dssp EEEEEESCEEECTTCEEEEEEECCS-SE-EEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCC--CCC
T ss_pred CCceEeceEEECCceeEEEEEEcCC-Cc-eEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCc--ccc
Confidence 799999999999999999999997 77 89999865322110 011235678889976531 112
Q ss_pred CCCCCCCCcCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchh
Q 007735 322 LPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIR 401 (591)
Q Consensus 322 ~p~~p~~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l 401 (591)
+|... .... .+ +.+ ..+|++.|.... .+ ..|+|||++|..+..+
T Consensus 306 ~p~~l----------~~~~----~l------~~~---------~~~r~~~l~~~~----~g-~~~~iNg~~~~~~~~~-- 349 (439)
T 2xu9_A 306 LPKAL----------SPFP----TL------PAP---------VVTRRLVLTEDM----MA-ARFFINGQVFDHRRVD-- 349 (439)
T ss_dssp CCSCC----------CCCC----CC------CCC---------SEEEEEEEEEEG----GG-TEEEETTBCCCTTCCC--
T ss_pred CcccC----------CCcc----cC------CCC---------CcceEEEEEeec----cC-ceEeECCEECCCCCCc--
Confidence 22110 0000 00 111 124667666431 11 3799999998643211
Q ss_pred hhccccccccccCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCC
Q 007735 402 LADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNK 481 (591)
Q Consensus 402 ~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~ 481 (591)
+.++.|++++|+|+|.+.+.||||||||+||||+++++.+
T Consensus 350 ------------------------------~~~~~g~~~~~~~~N~~~~~HP~HLHG~~F~Vl~~~g~~~---------- 389 (439)
T 2xu9_A 350 ------------------------------LKGQAQTVEVWEVENQGDMDHPFHLHVHPFQVLSVGGRPF---------- 389 (439)
T ss_dssp ------------------------------EEECTTCEEEEEEEECSSSCEEEEESSCCBEEEEETTEEC----------
T ss_pred ------------------------------eecCCCCEEEEEEEcCCCCCCCceeCCCcEEEEeeCCCCC----------
Confidence 2457899999999999999999999999999999976533
Q ss_pred CCCCccceEEeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEe
Q 007735 482 WDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 482 ~~p~~rDTv~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
.+|.|||||.|+|++|++|||++||||.|+|||||++|++.|||..++|.
T Consensus 390 ~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 390 PYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp SSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 36899999999999999999999999999999999999999999999884
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=3.1e-84 Score=698.93 Aligned_cols=407 Identities=16% Similarity=0.182 Sum_probs=321.5
Q ss_pred ceEEEEEEEEEEEecC-CCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCc
Q 007735 26 LFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCP 104 (591)
Q Consensus 26 ~~~~~~~~v~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~ 104 (591)
.+++|+|++++.++++ +|.++++|+|||++|||+||+++||+|+|+|+|+|+++++|||||++++.+ +||++ ||+
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~--~~~ 92 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP--ARM 92 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG--GGC
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC--cCc
Confidence 3578999999999988 799999999999999999999999999999999999999999999998764 99998 899
Q ss_pred cCCCCcEEEEEEeCCceeeeEEecCh----hhhhhcCceeeEEEecCCCCCCCCC--CCCCcceEEecccccCchHHHHH
Q 007735 105 IPPKWNWTYQFQVKDQVGSFFYFPSL----HFQRASGGFGGFIINNRAIIPIPFD--TPDGDITILIGDWYTRNHTALRK 178 (591)
Q Consensus 105 I~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~p~~--~~d~e~~l~l~d~~~~~~~~~~~ 178 (591)
|+||++|+|+|++++++||||||||. +.|+++||+|+|||++++....+++ ..++|++|+|+||+++...++..
T Consensus 93 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~ 172 (451)
T 2uxt_A 93 MSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEY 172 (451)
T ss_dssp BCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEEC
T ss_pred CCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCceec
Confidence 99999999999996569999999997 7899999999999999764333222 24789999999999986544321
Q ss_pred HhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEE-eCCeeEEEeecCCce-
Q 007735 179 TLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRI-QNHNLLLAETEGSYT- 256 (591)
Q Consensus 179 ~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~~- 256 (591)
...+.....++.++|||+.. |.++|++| +|||||||+|..+.+.|+| |||+|+||++||.++
T Consensus 173 -~~~~~~~~~~d~~liNG~~~--------------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~ 236 (451)
T 2uxt_A 173 -NEPGSGGFVGDTLLVNGVQS--------------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLP 236 (451)
T ss_dssp -CCCSSSCCCCSEEEETTEES--------------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEE
T ss_pred -ccccCCCCcCCEEEECCccc--------------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccC
Confidence 11222345689999999987 89999999 9999999999999999999 899999999999997
Q ss_pred eeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccc-------cCCCcceEEEEEecCCCCCCCCCCCCCCCCC
Q 007735 257 VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNES-------QWKRVTGVAILHYTNSKGKARGPLPEGPNDE 329 (591)
Q Consensus 257 ~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~-------~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~ 329 (591)
+|..++++.|+|||||||+|++++ ++ +|+|++........ ........++++|..+..... +....|.
T Consensus 237 ~P~~~~~l~l~pgeR~dvlv~~~~-~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~-~~~~~p~-- 311 (451)
T 2uxt_A 237 APVSVKQLSLAPGERREILVDMSN-GD-EVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPL-VTDSLPM-- 311 (451)
T ss_dssp EEEEESSEEECTTCEEEEEEECTT-CC-CEEEEC----------------CCCCSCCEEEEEEECSCCC-----CCCS--
T ss_pred CceEeceEEECceeEEEEEEEeCC-CC-EEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcC-ccccCcc--
Confidence 799999999999999999999995 56 89999765432110 011233457888875431100 0000010
Q ss_pred cCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhcccccc
Q 007735 330 FDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVK 409 (591)
Q Consensus 330 ~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~ 409 (591)
.|.+....+. ....++++.|.. .|+|||++|..+..
T Consensus 312 ---------------~L~~~~~~~~--------~~~~~~~~~l~~----------~~~iNg~~f~~~~~----------- 347 (451)
T 2uxt_A 312 ---------------RLLPTEIMAG--------SPIRSRDISLGD----------DPGINGQLWDVNRI----------- 347 (451)
T ss_dssp ---------------CSSSSCCCCC--------CCSEEEEEEECS----------SSSBTTBCCCTTCC-----------
T ss_pred ---------------ccCCCCCCCC--------CCcceEEEEEee----------EEEECCEeCCCCCC-----------
Confidence 1111110010 123456665531 58899999864211
Q ss_pred ccccCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccce
Q 007735 410 GAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTT 489 (591)
Q Consensus 410 g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDT 489 (591)
.+.++.|++++|+|+|. +.||||||||+||||++++. .+++.+|.||||
T Consensus 348 ---------------------~~~~~~G~~~~~~l~N~--~~HP~HLHGh~F~Vl~~~G~--------~~~~~~p~~rDT 396 (451)
T 2uxt_A 348 ---------------------DVTAQQGTWERWTVRAD--EPQAFHIEGVMFQIRNVNGA--------MPFPEDRGWKDT 396 (451)
T ss_dssp ---------------------CEEEETTCEEEEEEEEE--EEEEEEETTCEEEEEEETTB--------CCCGGGSSCBSE
T ss_pred ---------------------cEEcCCCCEEEEEEECC--CCcCeEECCceEEEEeeCCc--------CCCcccCCCccE
Confidence 12457899999999997 79999999999999999632 256678999999
Q ss_pred EEeCCCcEEEEEEEeCCccc----eeeecccccchhccceEEEEEecCC
Q 007735 490 TQVYPGAWTAILVSLDNVGI----WNLRTENLDSWYLGQETYVRVVNPE 534 (591)
Q Consensus 490 v~Vpp~g~~~irf~adNpG~----W~~HCHil~H~~~GM~~~~~V~~p~ 534 (591)
|.| +++++|+|++||||. |+|||||++|++.|||..++|...+
T Consensus 397 v~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 397 VWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp EEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSC
T ss_pred EEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCc
Confidence 999 899999999999988 9999999999999999999998654
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=8.6e-83 Score=699.16 Aligned_cols=422 Identities=14% Similarity=0.154 Sum_probs=327.0
Q ss_pred ceEEEEEEEEEEE--ecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCC
Q 007735 26 LFVYFDFEVSYIT--ASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNC 103 (591)
Q Consensus 26 ~~~~~~~~v~~~~--~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~ 103 (591)
..++|+|++++.. +.|||.++.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||++++. ++||++ ||
T Consensus 35 ~~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~~--~~ 110 (534)
T 3abg_A 35 EIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRA--AFDGWA--ED 110 (534)
T ss_dssp CCEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCT--TTTTCS--SS
T ss_pred ceEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCC--CCCCCC--CC
Confidence 3579999999654 67899999999999999999999999999999999999999999999998864 799986 89
Q ss_pred ccCCCCcEEEEEEeCCceeeeEEecChh----hhhhcCceeeEEEecCCCCCCCCCC--CCCcceEEecccccCchHHHH
Q 007735 104 PIPPKWNWTYQFQVKDQVGSFFYFPSLH----FQRASGGFGGFIINNRAIIPIPFDT--PDGDITILIGDWYTRNHTALR 177 (591)
Q Consensus 104 ~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~~p~~~--~d~e~~l~l~d~~~~~~~~~~ 177 (591)
+|+||++|+|+|++.+++||||||||.+ .|+++||+|+|||++++....+++. .+.|++|+|+||+++.++++.
T Consensus 111 ~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~ 190 (534)
T 3abg_A 111 ITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLV 190 (534)
T ss_dssp CBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBC
T ss_pred CCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCcee
Confidence 9999999999999966689999999974 5899999999999998765444432 367899999999998654432
Q ss_pred HHhhcCC-CCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeC-------CeeEEE
Q 007735 178 KTLDAGK-GLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQN-------HNLLLA 249 (591)
Q Consensus 178 ~~~~~~~-~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~g-------h~~~vi 249 (591)
. ..+. ....+|.++|||+.+ +.++|++ ++|||||||+|..+.+.|+|++ |+|+||
T Consensus 191 ~--~~~~~~~~~gd~~lvNG~~~--------------p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vI 253 (534)
T 3abg_A 191 T--TNGELNSFWGDVIHVNGQPW--------------PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVI 253 (534)
T ss_dssp C--CTTCSSCCCCSEEEETTEES--------------CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEE
T ss_pred c--cCCCCccccCceeccCCccC--------------ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEE
Confidence 1 1121 233579999999987 7899998 5999999999999999999987 999999
Q ss_pred eecCCc-eeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecc--cccccCCCcceEEEEEecCCCCCCCCCCCCCC
Q 007735 250 ETEGSY-TVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF--VNESQWKRVTGVAILHYTNSKGKARGPLPEGP 326 (591)
Q Consensus 250 a~DG~~-~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~--~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p 326 (591)
++||.+ .+|+.++++.|+|||||||+|++++.+|++|+|++.... +...........++++|..+..+........|
T Consensus 254 a~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P 333 (534)
T 3abg_A 254 ASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVP 333 (534)
T ss_dssp EETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCC
T ss_pred EeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCc
Confidence 999985 579999999999999999999999877757999875421 11000111234588998754321000000000
Q ss_pred CCCcCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccc
Q 007735 327 NDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWF 406 (591)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~ 406 (591)
..|.+.. .|.+. ...++++.+... ...|+|||++|.++..|.+
T Consensus 334 -----------------~~L~~~~-~p~~~-------~~~~~~~~~~~~-------~~~w~iNG~~f~~~~~p~l----- 376 (534)
T 3abg_A 334 -----------------ANLRDVP-FPSPT-------TNTPRQFRFGRT-------GPTWTINGVAFADVQNRLL----- 376 (534)
T ss_dssp -----------------CCCCCCS-CCCCC-------CCCCEEEECSCC-------CSTTCCCCBTTBCTTSCCC-----
T ss_pred -----------------cccccCC-CCCCc-------cccceEEEEecc-------CceeEECCcccCCCCCcce-----
Confidence 0111100 11111 134566665431 1258999999976544432
Q ss_pred cccccccCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCCC-cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCC
Q 007735 407 KVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDT-KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGI 485 (591)
Q Consensus 407 ~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~-~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~ 485 (591)
+.++.|++++|+|+|.+. +.||||||||+||||+++.|.+.. ..+++.+ .
T Consensus 377 -------------------------~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~---~~~~~~~-~ 427 (534)
T 3abg_A 377 -------------------------ANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNAR---TVMPYES-G 427 (534)
T ss_dssp -------------------------CEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSS---CCCSGGG-S
T ss_pred -------------------------eeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcC---cCCcccc-C
Confidence 124679999999999874 599999999999999996554321 1345556 8
Q ss_pred ccceEEeCCCcEEEEEEE-eCCccceeeecccccchhccceEEEEEecCC
Q 007735 486 ARTTTQVYPGAWTAILVS-LDNVGIWNLRTENLDSWYLGQETYVRVVNPE 534 (591)
Q Consensus 486 ~rDTv~Vpp~g~~~irf~-adNpG~W~~HCHil~H~~~GM~~~~~V~~p~ 534 (591)
|||||.|+|++|++|||+ +||||.|+|||||++|++.|||..++|...+
T Consensus 428 ~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 428 LKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp CBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred CcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 999999999999999998 8999999999999999999999999998765
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=5.1e-81 Score=684.81 Aligned_cols=429 Identities=17% Similarity=0.216 Sum_probs=321.9
Q ss_pred ceEEEEEEEEEEEec--CCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCC----------------------Cce
Q 007735 26 LFVYFDFEVSYITAS--PLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDE----------------------SLL 81 (591)
Q Consensus 26 ~~~~~~~~v~~~~~~--~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~----------------------~~s 81 (591)
...+|++++++.... +++.++++|+|||++|||+||+++||+|+|+|+|+|++ +++
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~ts 103 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTV 103 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBC
T ss_pred CceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcE
Confidence 346699999988764 45678999999999999999999999999999999986 899
Q ss_pred eeecCccCCCCCCCCCCCC---CCCccCCCCcE---EEEEEeCCceeeeEEecChh----hhhhcCceeeEEEecCCCCC
Q 007735 82 IHWSGIQQRRSSWQDGLLG---TNCPIPPKWNW---TYQFQVKDQVGSFFYFPSLH----FQRASGGFGGFIINNRAIIP 151 (591)
Q Consensus 82 iH~HG~~~~~~~~~DGv~~---tq~~I~PG~~~---~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~ 151 (591)
|||||+++. +++||+++ +||+|+||++| +|+|++.+++||||||||.. .|+++||+|+|||+++....
T Consensus 104 iHwHGl~~~--~~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~ 181 (513)
T 2wsd_A 104 VHLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKR 181 (513)
T ss_dssp EEEETCCCC--GGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGG
T ss_pred EEcCCCcCC--CccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccc
Confidence 999999886 57999994 89999999555 99999866899999999974 58999999999999976644
Q ss_pred CCCCCCCCcceEEecccccCchHHHHHHhh-----------cCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEec
Q 007735 152 IPFDTPDGDITILIGDWYTRNHTALRKTLD-----------AGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHP 220 (591)
Q Consensus 152 ~p~~~~d~e~~l~l~d~~~~~~~~~~~~~~-----------~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~ 220 (591)
.+++.+++|++|+|+||+++.+.++..... .......++.+||||+.+ |.++|++
T Consensus 182 ~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~--------------p~~~v~~ 247 (513)
T 2wsd_A 182 LKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW--------------PYLEVEP 247 (513)
T ss_dssp GCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES--------------CEEECCS
T ss_pred ccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc--------------ceEEecC
Confidence 444456899999999999886544321110 001234579999999997 8899998
Q ss_pred CCEEEEEEeEeCCcceEEEEEeCC-eeEEEeecCCce-eeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccc
Q 007735 221 GKTYRIRVHNVGISTSLNFRIQNH-NLLLAETEGSYT-VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNES 298 (591)
Q Consensus 221 G~~~rlRliN~~~~~~~~~~i~gh-~~~via~DG~~~-~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~ 298 (591)
++|||||||+|..+.+.|+|+|| +|+||++||.++ +|+.++++.|+|||||||+|++++.+|..+.++.... + ..
T Consensus 248 -~~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~-~-~~ 324 (513)
T 2wsd_A 248 -RKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAG-C-GG 324 (513)
T ss_dssp -SEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCC-S-SS
T ss_pred -CEEEEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEeccc-c-cc
Confidence 58999999999999999999999 999999999998 6999999999999999999999987772233333221 1 11
Q ss_pred cCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCc
Q 007735 299 QWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPE 378 (591)
Q Consensus 299 ~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~ 378 (591)
........++++|..+...........|. .+.. + ...+. .....++++.|....
T Consensus 325 ~~~~~~~~~il~~~~~~~~~~~~~~~~p~-------~l~~---~-------~~~~~-------~~~~~~~~~~l~~~~-- 378 (513)
T 2wsd_A 325 DVNPETDANIMQFRVTKPLAQKDESRKPK-------YLAS---Y-------PSVQH-------ERIQNIRTLKLAGTQ-- 378 (513)
T ss_dssp SCCTTTTTEEEEEECCSCCSSCCCCCCCS-------BCSC---C-------GGGCC-------CCEEEEEEEEEEEEE--
T ss_pred cCCCCCCcceEEEEeccCcccCccCCCCc-------cccC---C-------CCccc-------CCCcceEEEEEEeec--
Confidence 11112345788997543111000000110 0100 0 00000 012345666665432
Q ss_pred ccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecC
Q 007735 379 MIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSG 458 (591)
Q Consensus 379 ~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG 458 (591)
...|...|+|||++|..+. + +.++.|++++|+|+|.+.+.|||||||
T Consensus 379 ~~~g~~~~~iNg~~~~~~~-~--------------------------------~~~~~g~~~~w~l~N~~~~~HP~HlHG 425 (513)
T 2wsd_A 379 DEYGRPVLLLNNKRWHDPV-T--------------------------------ETPKVGTTEIWSIINPTRGTHPIHLHL 425 (513)
T ss_dssp CTTSCEEEEETTBCTTSCC-C--------------------------------BCCBTTCEEEEEEEECSSSCEEEEESS
T ss_pred CCCCCceEeECCccCCCcc-c--------------------------------EecCCCCEEEEEEEcCCCCCcCEeEeC
Confidence 2235567999999885321 0 124579999999999988999999999
Q ss_pred ceEEEEEEcCC---CCCCCCCCCCCC---------CCCCccceEEeCCCcEEEEEEEe-CCccceeeecccccchhccce
Q 007735 459 YAFFVVGMDYG---EWTDNSRGTYNK---------WDGIARTTTQVYPGAWTAILVSL-DNVGIWNLRTENLDSWYLGQE 525 (591)
Q Consensus 459 ~~F~Vv~~g~g---~~~~~~~~~~n~---------~~p~~rDTv~Vpp~g~~~irf~a-dNpG~W~~HCHil~H~~~GM~ 525 (591)
|+||||+++.+ .|++. ..+|+ .++.|||||.|+|++++.|+|++ ||||.|+|||||++|++.|||
T Consensus 426 ~~F~Vl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm 503 (513)
T 2wsd_A 426 VSFRVLDRRPFDIARYQES--GELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMM 503 (513)
T ss_dssp CCEEEEEEEEBCHHHHHHH--CCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCE
T ss_pred ceEEEEEecCccccccccc--ccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCc
Confidence 99999999752 12111 01222 23569999999999999999998 899999999999999999999
Q ss_pred EEEEEecCC
Q 007735 526 TYVRVVNPE 534 (591)
Q Consensus 526 ~~~~V~~p~ 534 (591)
..++|..++
T Consensus 504 ~~~~V~~~~ 512 (513)
T 2wsd_A 504 RPMDITDPH 512 (513)
T ss_dssp EEEEEBCC-
T ss_pred eeEEEeCCC
Confidence 999997653
No 13
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2.9e-80 Score=668.23 Aligned_cols=414 Identities=19% Similarity=0.211 Sum_probs=316.1
Q ss_pred cccCCceEEEEEEEEEEEecC-CCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC
Q 007735 21 CSAADLFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL 99 (591)
Q Consensus 21 ~~~~~~~~~~~~~v~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~ 99 (591)
..+.+++++|+|++++.++.+ +|.++++|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++. +++||++
T Consensus 44 ~~~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DG~p 121 (481)
T 3zx1_A 44 ESKEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVP--PDQDGSP 121 (481)
T ss_dssp CCCSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCC--GGGSCCT
T ss_pred cccCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccC--CccCCCc
Confidence 346678899999999999986 6999999999999999999999999999999999999999999999874 6899997
Q ss_pred CCCCccCCCCcEEEEEEeCCc-eeeeEEecCh----hhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchH
Q 007735 100 GTNCPIPPKWNWTYQFQVKDQ-VGSFFYFPSL----HFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHT 174 (591)
Q Consensus 100 ~tq~~I~PG~~~~Y~f~~~~~-~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~ 174 (591)
||+|+||++|+|+|+++++ +||||||||. +.|+.+||+|+|||++++....++ +.++ |+|+||+++..+
T Consensus 122 --q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g 195 (481)
T 3zx1_A 122 --HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENA 195 (481)
T ss_dssp --TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTS
T ss_pred --cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCC
Confidence 8999999999999999643 8999999995 689999999999999987643333 4454 999999998654
Q ss_pred HHHHH-hhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecC
Q 007735 175 ALRKT-LDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEG 253 (591)
Q Consensus 175 ~~~~~-~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG 253 (591)
++... .........++.++|||+.. |.++|++|+ ||||||+|..+.+.|+|+||+|+||++||
T Consensus 196 ~~~~~~~~~~~~g~~gd~~lvNG~~~--------------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DG 259 (481)
T 3zx1_A 196 QIPNNNLNDWLNGREGEFVLINGQFK--------------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDG 259 (481)
T ss_dssp CCCCCCHHHHHHCCCCSEEEETTEES--------------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETT
T ss_pred ccccccchhhccCCcCCEEEECCccC--------------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCC
Confidence 32200 00000123578999999986 899999998 99999999999999999999999999998
Q ss_pred Cce-eeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccc-cCCCcceEEEEEecCCCCCCCCCCCCCCCCCcC
Q 007735 254 SYT-VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNES-QWKRVTGVAILHYTNSKGKARGPLPEGPNDEFD 331 (591)
Q Consensus 254 ~~~-~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~-~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~ 331 (591)
.++ +|+.++++.|+|||||||+|++++ ++ .|.+++........ .........++++.... .+.++|..
T Consensus 260 g~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~-~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~lP~~------ 329 (481)
T 3zx1_A 260 GLIEKTIYKEELFLSPASRVEVLIDAPK-DG-NFKLESAYYDRDKMMVKEEPNTLFLANINLKK--ENVELPKN------ 329 (481)
T ss_dssp EEEEEEEEESSEEECTTCEEEEEEECSS-CE-EEEEEECCCCCCCSSCCCCCCCEEEEEEEEEC--CCCCCCSC------
T ss_pred CccCCceEeCeEEECCccEEEEEEEcCC-Cc-EEEEEEecccccCccccCCCCceeEEEEecCC--CCccCCcc------
Confidence 765 699999999999999999999985 45 78887754322100 00012223344433221 11112210
Q ss_pred cccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcc----cCCe--------eEEEEcCeeccCCCCc
Q 007735 332 KTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEM----IDGK--------RRATLSGISFVNPSTP 399 (591)
Q Consensus 332 ~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~----~~g~--------~~~~iNg~s~~~p~~P 399 (591)
+.+..+.+ ..+.+|++.|....... ..+. ..|+|||+.|.. +.|
T Consensus 330 --------------l~~~~~~~---------~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~-~~~ 385 (481)
T 3zx1_A 330 --------------LKIFKPSE---------EPKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDL-KRI 385 (481)
T ss_dssp --------------SCCCCCCC---------CCCEEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCT-TCC
T ss_pred --------------ccCCCCCC---------CCCcEEEEEEeccchhcccccccccccccccccceeEECCEeCCC-CCc
Confidence 00000001 11245666665422100 0011 139999988742 111
Q ss_pred hhhhccccccccccCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEE--cCCCCCCCCCC
Q 007735 400 IRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGM--DYGEWTDNSRG 477 (591)
Q Consensus 400 ~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~--g~g~~~~~~~~ 477 (591)
.+.++.|++|+|+|.|.+.+.|||||||++|+|+++ ++..+
T Consensus 386 -------------------------------~~~~~~G~~v~w~l~N~~~~~Hp~HlHG~~F~vl~~~~~g~~~------ 428 (481)
T 3zx1_A 386 -------------------------------DLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKVQ------ 428 (481)
T ss_dssp -------------------------------CEEEETTCCEEEEEEECSSSCEEEEETTCCEEEEEEEETTEEE------
T ss_pred -------------------------------eEEeCCCCEEEEEEEcCCCCceeEEEeccEEEEEEecccCCCC------
Confidence 134678999999999999999999999999999998 43221
Q ss_pred CCCCCCCCccceEEeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEe
Q 007735 478 TYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 478 ~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
...++.|||||.|+|+++++|+|++||||.|+|||||++|++.|||..++|.
T Consensus 429 --~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 429 --KAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp --ECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred --CcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 1235789999999999999999999999999999999999999999999996
No 14
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=8.7e-80 Score=692.89 Aligned_cols=460 Identities=15% Similarity=0.130 Sum_probs=310.6
Q ss_pred CCceEEEEEEEEEEEe--cCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCC----------------------
Q 007735 24 ADLFVYFDFEVSYITA--SPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDES---------------------- 79 (591)
Q Consensus 24 ~~~~~~~~~~v~~~~~--~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~---------------------- 79 (591)
....++|++++++... .+++.++++|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 29 ~~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~ 108 (612)
T 3gyr_A 29 DEVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNT 108 (612)
T ss_dssp SCTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGG
T ss_pred CCCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCccccc
Confidence 3445789999988775 4566788999999999999999999999999999999765
Q ss_pred -------------------ceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecCh----hhhhhc
Q 007735 80 -------------------LLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL----HFQRAS 136 (591)
Q Consensus 80 -------------------~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~ 136 (591)
|+|||||+++. +++||++ ||+|.||++|+|+|++.+++||||||||. +.|+.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~ttiHwHGl~~~--~~~DGv~--q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~ 184 (612)
T 3gyr_A 109 EPGRGGVEPNKDVAALPAWSVTHLHGAQTG--GGNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp SCSCTTCCCCHHHHTCCCCBCEEEETCCCC--TTTSCCG--GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTT
T ss_pred cccccccccccccccCCCCceEEcCCCccC--CcccCcc--cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhc
Confidence 67899999774 5799987 99999999999999996668999999995 689999
Q ss_pred CceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHHHH--h-------hc-----C---CCCCCCceEEEcCcCC
Q 007735 137 GGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKT--L-------DA-----G---KGLGMPDGVLINGKGP 199 (591)
Q Consensus 137 Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~~~--~-------~~-----~---~~~~~~~~~lING~~~ 199 (591)
||+|+|||+++++...+++.+++|++|+|+||+++.+.+.... + .. + .....++.++|||+.+
T Consensus 185 Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~ 264 (612)
T 3gyr_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred cceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc
Confidence 9999999999876666666779999999999998754332110 0 00 0 0123468899999987
Q ss_pred CCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCC-------eeEEEeecCCcee-eeee------eEEE
Q 007735 200 YQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNH-------NLLLAETEGSYTV-QQNY------TSLD 265 (591)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh-------~~~via~DG~~~~-p~~~------d~v~ 265 (591)
|.+.+++ ++|||||||+|..+.+.|+|++| +|+|||+||.+++ |+.+ ++|.
T Consensus 265 --------------p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~ 329 (612)
T 3gyr_A 265 --------------PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLS 329 (612)
T ss_dssp --------------CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEE
T ss_pred --------------ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEE
Confidence 8899876 58999999999999999999998 4999999999985 6544 5899
Q ss_pred EccccEEEEEEEeCCCCCcceEEEEeecccccc---cCCCcceEEEEEecCCCCC--CCCCCCCCCCCCcCccccccccc
Q 007735 266 IHVGQSYSFLVTMDQNASTDYYIVASARFVNES---QWKRVTGVAILHYTNSKGK--ARGPLPEGPNDEFDKTFSMNQAR 340 (591)
Q Consensus 266 i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~--~~~~~p~~p~~~~~~~~~~~~~~ 340 (591)
|+|||||||+|++++.++..|+++......... .........+++|...... ....+|..... ... ..
T Consensus 330 i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~-~~---- 402 (612)
T 3gyr_A 330 AAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSG--SFR-RM---- 402 (612)
T ss_dssp ECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCS--SCC-CC----
T ss_pred eccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccccccc--ccc-cc----
Confidence 999999999999998877334444333221111 0122334456666533211 11111111000 000 00
Q ss_pred ccccccccCCCCCCCCCCCCcCccceeEEEEEecCCC-cccCCeeEEEEcCeecc-CCCCchhhhcc-ccccc---cccC
Q 007735 341 SIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPP-EMIDGKRRATLSGISFV-NPSTPIRLADW-FKVKG---AYKL 414 (591)
Q Consensus 341 ~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~-~~~~g~~~~~iNg~s~~-~p~~P~l~~~~-~~~~g---~~~~ 414 (591)
. ...+ ...+...+..... ........+.++..... ....|...... ....+ .+..
T Consensus 403 ------~----~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (612)
T 3gyr_A 403 ------S----HDIP---------HGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRR 463 (612)
T ss_dssp ------C----TTSC---------CEEEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEE
T ss_pred ------c----cccc---------cccccccccccccccccccccccccccccccccccccccceeeeccCCCccccccc
Confidence 0 0000 0001111110000 00000111111111000 00000000000 00000 0000
Q ss_pred CCCCCCCCCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCC----------------CCCC
Q 007735 415 DFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDN----------------SRGT 478 (591)
Q Consensus 415 ~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~----------------~~~~ 478 (591)
++....+...+.++.|++++|+|+|.+.+.||||||||+||||+++.+.+... ....
T Consensus 464 -------n~~~~~~~~~~~~~~g~~~~w~i~N~~~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (612)
T 3gyr_A 464 -------TARTFNDGLGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVP 536 (612)
T ss_dssp -------EECSTTSCCCEEEETTCEEEEEEEECSSSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECC
T ss_pred -------cCccCCCCcceEeCCCCEEEEEEEcCCCCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccC
Confidence 00001122335678899999999999999999999999999999865433211 0123
Q ss_pred CCCCCCCccceEEeCCCcEEEEEEE-eCCccceeeecccccchhccceEEEEEecCCC
Q 007735 479 YNKWDGIARTTTQVYPGAWTAILVS-LDNVGIWNLRTENLDSWYLGQETYVRVVNPEA 535 (591)
Q Consensus 479 ~n~~~p~~rDTv~Vpp~g~~~irf~-adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~ 535 (591)
.+..++.|||||.|++++|++|||+ +||||.|+||||||+|||.|||..|+|+.|+.
T Consensus 537 ~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 537 LAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp CCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred cccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 5667789999999999999999998 79999999999999999999999999998864
No 15
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=4.8e-80 Score=665.25 Aligned_cols=385 Identities=17% Similarity=0.241 Sum_probs=301.0
Q ss_pred EEECCC-CCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEe
Q 007735 49 IAINGK-FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYF 127 (591)
Q Consensus 49 ~~~Ng~-~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH 127 (591)
|+|||+ +|||+||+++||+|+|+|+|+|+++++|||||++++ +++||+++ |+|+||++|+|+|++++++||||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~~--~~i~PG~~~~Y~f~~~~~~GT~wYH 103 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVN--WHNDAHPS--FAITPGESYNYSFDVVNRAGTYLYH 103 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCC--HHHHTCGG--GCBCTTCEEEEEEECCSCSEEEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCC--CccCCCCC--ccCCCCCEEEEEEEcCCCCCceEec
Confidence 999999 999999999999999999999999999999999885 57999997 9999999999999997689999999
Q ss_pred cC----hhhhhhcCceeeEEEecCCCCCCCCCCCC-CcceEEecccccCchHHHHHH--hhcCCCCCCCceEEEcCcCCC
Q 007735 128 PS----LHFQRASGGFGGFIINNRAIIPIPFDTPD-GDITILIGDWYTRNHTALRKT--LDAGKGLGMPDGVLINGKGPY 200 (591)
Q Consensus 128 ~H----~~~q~~~Gl~G~liV~~~~~~~~p~~~~d-~e~~l~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~lING~~~~ 200 (591)
|| ++.|+++||+|+|||++++.. .+++ +| +|++|+++||+++. .++... .........++.++|||+..
T Consensus 104 ~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~-~d~~e~~l~l~D~~~~~-~~~~~~~~~~~~~~~~~~~~~liNG~~~- 179 (448)
T 3aw5_A 104 PHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFK-YGVNDLPLVISDRRFIG-GAPVYNPTPMEMIAGFLGNAVLVNGVKD- 179 (448)
T ss_dssp ECCTTTHHHHHHTTCCEEEEEECTTTT-TTCC-BTTTEEEEEEEEEEEET-TEEECCCCHHHHHHCCCCSEEEETTEET-
T ss_pred cCCCCchHHHHhccceEEEEEeCCccc-cCCC-CCCceEEEEEEeeccCC-CcccccccccccccCccccEEEECCccc-
Confidence 99 789999999999999997664 2222 25 89999999999986 442210 00011124579999999987
Q ss_pred CCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEE--eC---CeeEEEeecCCcee-eeeeeEEEEccccEEEE
Q 007735 201 QYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRI--QN---HNLLLAETEGSYTV-QQNYTSLDIHVGQSYSF 274 (591)
Q Consensus 201 ~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i--~g---h~~~via~DG~~~~-p~~~d~v~i~pGqR~dv 274 (591)
+.++|++| +|||||||+|..+.+.|+| +| |+|+||++||.+++ |..++++.|+|||||||
T Consensus 180 -------------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dv 245 (448)
T 3aw5_A 180 -------------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEV 245 (448)
T ss_dssp -------------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEE
T ss_pred -------------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEE
Confidence 89999999 9999999999999999999 99 99999999999998 99999999999999999
Q ss_pred EEEeCCCCCcceEEEEeecccccc----------cCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccccccccccccc
Q 007735 275 LVTMDQNASTDYYIVASARFVNES----------QWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRW 344 (591)
Q Consensus 275 lv~~~~~~g~~y~i~~~~~~~~~~----------~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~ 344 (591)
+|++++ + .|+|++........ ........++++|.++..... |.. +..
T Consensus 246 lv~~~~--~-~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~~-------L~~------ 303 (448)
T 3aw5_A 246 VVELGE--G-VYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP------VEA-------LSD------ 303 (448)
T ss_dssp EEEECS--E-EEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC------CCC-------CSC------
T ss_pred EEECCC--C-ceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC------ccc-------cCC------
Confidence 999983 5 89999876432110 011234567788865431110 110 000
Q ss_pred ccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCC
Q 007735 345 NVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGP 424 (591)
Q Consensus 345 ~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~ 424 (591)
+. +.+. ....++++.|... ...|+|||++|..+ .|.
T Consensus 304 -lp---~~~~--------~~~~~~~~~l~~~-------~~~~~iNg~~~~~~-~p~------------------------ 339 (448)
T 3aw5_A 304 -PP---PEPP--------KPTRTRRFALSLS-------GMQWTINGMFWNAS-NPL------------------------ 339 (448)
T ss_dssp -CC---CCCC--------CCSEEEEEEEEEE-------TTEEEETTBCCCTT-CTT------------------------
T ss_pred -CC---CCCC--------CCCceEEEEEeCC-------CceeeECCCcCCCC-CCc------------------------
Confidence 00 0010 1235677777542 13699999998632 121
Q ss_pred CCcceEEEe-ccCCcEEEEEEecCC-CcceeeeecCceEEEEEEcCCCCCC-CCCCCCC----CCCCCccceEEeCCCcE
Q 007735 425 PRMETSVIN-GTYRGFMEVILQNND-TKMHAYHMSGYAFFVVGMDYGEWTD-NSRGTYN----KWDGIARTTTQVYPGAW 497 (591)
Q Consensus 425 ~~~~~~v~~-~~~g~~ve~vl~N~~-~~~HPfHlHG~~F~Vv~~g~g~~~~-~~~~~~n----~~~p~~rDTv~Vpp~g~ 497 (591)
+. ++.|++|+|+|+|.+ .+.||||||||+||||+++ |.+.. .+...+| ..++.|||||.|+|+++
T Consensus 340 -------~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~ 411 (448)
T 3aw5_A 340 -------FEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWIIERK-DSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGET 411 (448)
T ss_dssp -------CCCEEECEEEEEEEEECSSSCCEEEEESSSCBEEEEEE-SCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCE
T ss_pred -------eeccCCCCeEEEEEEcCCCCCCcCEEECCceEEEEEec-CCCcccccccccccCCCccccCCccEEEeCCCCE
Confidence 12 457999999999998 8899999999999999995 44421 1122232 34557999999999999
Q ss_pred EEEE--EE---eCCccceeeecccccchhccceEEEEEe
Q 007735 498 TAIL--VS---LDNVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 498 ~~ir--f~---adNpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
++|+ |+ +||| |+|||||++|++.|||..++|.
T Consensus 412 ~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 412 VKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp EEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred EEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 8655 99 9999 9999999999999999999883
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=4.1e-78 Score=651.08 Aligned_cols=417 Identities=18% Similarity=0.236 Sum_probs=308.0
Q ss_pred CceEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCc
Q 007735 25 DLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCP 104 (591)
Q Consensus 25 ~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~ 104 (591)
+..+.|+|++++.+++++|.++++|+|||++|||+|++++||+|+|+|+|+|+++++|||||++++ +++||++ ||+
T Consensus 15 ~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~p--~~~ 90 (488)
T 3od3_A 15 DARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVP--GEVDGGP--QGI 90 (488)
T ss_dssp CTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCC--HHHHCCT--TCC
T ss_pred CCCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccC--cccCCCC--cCc
Confidence 445789999999999999999999999999999999999999999999999999999999999886 4799998 899
Q ss_pred cCCCCcEEEEEEeCCceeeeEEecCh----hhhhhcCceeeEEEecCCCCCCCCC--CCCCcceEEecccccCchHHHHH
Q 007735 105 IPPKWNWTYQFQVKDQVGSFFYFPSL----HFQRASGGFGGFIINNRAIIPIPFD--TPDGDITILIGDWYTRNHTALRK 178 (591)
Q Consensus 105 I~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~p~~--~~d~e~~l~l~d~~~~~~~~~~~ 178 (591)
|.||++|+|+|++.+++||||||||. +.|+++||+|+|||++++....+++ ...+|++|+|+||+++.++++..
T Consensus 91 i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~ 170 (488)
T 3od3_A 91 IPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDY 170 (488)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCC
T ss_pred CcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceec
Confidence 99999999999996558999999996 6899999999999999765433322 23568999999999975543211
Q ss_pred Hhh--cCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEE-eCCeeEEEeecCCc
Q 007735 179 TLD--AGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRI-QNHNLLLAETEGSY 255 (591)
Q Consensus 179 ~~~--~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~ 255 (591)
..+ .......+|.++|||+.+ |.+.+ +|++|||||||+|..+.+.|+| +||+|+||++||.+
T Consensus 171 ~~~~~~~~~g~~gd~~lvNG~~~--------------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~ 235 (488)
T 3od3_A 171 QLDVMTAAVGWFGDTLLTNGAIY--------------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGL 235 (488)
T ss_dssp CCSHHHHHHCCCCSEEEETTBSS--------------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEE
T ss_pred cccccccccCCCCCEEEEcCCcC--------------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCc
Confidence 000 000123578999999987 77776 5689999999999999999999 69999999999998
Q ss_pred e-eeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccC-CCcceEEEEEecCCCCCCCCCCCCCCCCCcCcc
Q 007735 256 T-VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQW-KRVTGVAILHYTNSKGKARGPLPEGPNDEFDKT 333 (591)
Q Consensus 256 ~-~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~-~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~ 333 (591)
+ +|+.+++|.|+|||||||+|++++ ++ .|++++.......... .......+++......+....+|..
T Consensus 236 l~~P~~~~~l~l~pGeR~dvlv~~~~-~~-~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~-------- 305 (488)
T 3od3_A 236 LPEPVKVSELPVLMGERFEVLVEVND-NK-PFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDT-------- 305 (488)
T ss_dssp EEEEEEESCEEECTTCEEEEEEEECT-TC-CEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSC--------
T ss_pred ccCccEeceEEECCCCEEEEEEEeCC-Cc-eEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCcc--------
Confidence 6 799999999999999999999995 45 8999875432211000 0011222333221110011111110
Q ss_pred cccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCC-------------------Cc---------ccCC---
Q 007735 334 FSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKP-------------------PE---------MIDG--- 382 (591)
Q Consensus 334 ~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~-------------------~~---------~~~g--- 382 (591)
|...++.|.. ....+|++.|.... .. ...|
T Consensus 306 ------------L~~~~~~~~~-------~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 366 (488)
T 3od3_A 306 ------------LSSLPALPSL-------EGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMN 366 (488)
T ss_dssp ------------CCCCCCCCCC-------TTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCC
T ss_pred ------------cccCCCCccc-------ccccceEEEEEecccccccccccccccccccccccccccccccccccCccc
Confidence 0000000000 01123444442110 00 0011
Q ss_pred ----------eeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCC-Ccc
Q 007735 383 ----------KRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNND-TKM 451 (591)
Q Consensus 383 ----------~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~-~~~ 451 (591)
...|+|||++|.. +.| .+.++.|++++|.|.|.+ .+.
T Consensus 367 ~~~~g~~~~~~~~~~ING~~~~~-~~~-------------------------------~~~~~~G~~e~w~l~N~~~~~~ 414 (488)
T 3od3_A 367 HMNHGGKFDFHHANKINGQAFDM-NKP-------------------------------MFAAAKGQYERWVISGVGDMML 414 (488)
T ss_dssp CSCCCGGGCGGGCEEETTBCCCT-TCC-------------------------------SEECCBSSCEEEEEECTTCCCC
T ss_pred cccccccccccceeeECCeeCCC-CCC-------------------------------ceEcCCCCEEEEEEEeCCCCCC
Confidence 0138999998752 111 134678999999999987 579
Q ss_pred eeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeC----CccceeeecccccchhccceEE
Q 007735 452 HAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLD----NVGIWNLRTENLDSWYLGQETY 527 (591)
Q Consensus 452 HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~ad----NpG~W~~HCHil~H~~~GM~~~ 527 (591)
|||||||++|+|+++++.... ..++.|||||.|+ |+++.|+|++| |||.|+||||+|+|+|.|||..
T Consensus 415 Hp~HlHg~~F~Vl~~~g~~~~--------~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~ 485 (488)
T 3od3_A 415 HPFHIHGTQFRILSENGKPPA--------AHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLG 485 (488)
T ss_dssp EEEEETTCCBEEEEBTTBCCC--------GGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEE
T ss_pred ccEEEcCceEEEeccCCCccc--------cccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEE
Confidence 999999999999998643221 1246799999999 99999999974 5789999999999999999999
Q ss_pred EEE
Q 007735 528 VRV 530 (591)
Q Consensus 528 ~~V 530 (591)
|+|
T Consensus 486 f~V 488 (488)
T 3od3_A 486 FTV 488 (488)
T ss_dssp EEC
T ss_pred EEC
Confidence 986
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=6.1e-77 Score=657.46 Aligned_cols=448 Identities=15% Similarity=0.177 Sum_probs=319.5
Q ss_pred CceEEEEEEEEEEEec--CCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCC-----------------------
Q 007735 25 DLFVYFDFEVSYITAS--PLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDES----------------------- 79 (591)
Q Consensus 25 ~~~~~~~~~v~~~~~~--~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~----------------------- 79 (591)
...++|+|++++.+.. +++.++++|+|||++|||+|++++||+|+|+++|+|+++
T Consensus 30 ~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~ 109 (612)
T 2g23_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccc
Confidence 4468899999998875 455789999999999999999999999999999999863
Q ss_pred ------------------ceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChh----hhhhcC
Q 007735 80 ------------------LLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH----FQRASG 137 (591)
Q Consensus 80 ------------------~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~G 137 (591)
+++||||+++.. .+||++ ||+|.||++|+|+|++.+++||||||||.. .|+.+|
T Consensus 110 p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~--~~DG~p--~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~G 185 (612)
T 2g23_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGG--GNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAG 185 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCT--TTSCCG--GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTTT
T ss_pred cccccccccccccccCCceEEEcCCCCCCC--ccCCCC--cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhcc
Confidence 899999998864 599987 899999999999999966799999999975 499999
Q ss_pred ceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHH--HHHH-------hhc---C-C----CCCCCceEEEcCcCCC
Q 007735 138 GFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTA--LRKT-------LDA---G-K----GLGMPDGVLINGKGPY 200 (591)
Q Consensus 138 l~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~--~~~~-------~~~---~-~----~~~~~~~~lING~~~~ 200 (591)
|+|+|||++++....+++.+|+|++|+|+||+++.+.+ +... ++. + . ....+|.+||||+.+
T Consensus 186 L~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~- 264 (612)
T 2g23_A 186 LYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW- 264 (612)
T ss_dssp CEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES-
T ss_pred ceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC-
Confidence 99999999976555555567999999999999975421 1000 010 1 0 113579999999987
Q ss_pred CCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCC-------eeEEEeecCCcee-eeeee------EEEE
Q 007735 201 QYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNH-------NLLLAETEGSYTV-QQNYT------SLDI 266 (591)
Q Consensus 201 ~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh-------~~~via~DG~~~~-p~~~d------~v~i 266 (591)
|.++|++| +|||||||+|..+.+.|+|++| +|+|||+||++++ |+.++ +|.|
T Consensus 265 -------------p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l 330 (612)
T 2g23_A 265 -------------PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSA 330 (612)
T ss_dssp -------------CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEE
T ss_pred -------------CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEE
Confidence 89999999 9999999999999999999999 8999999999995 89999 9999
Q ss_pred ccccEEEEEEEeCCCCCcceEEEEeeccccccc--C-CCcceEEEEEecCCCC--CCCCCCCCCCCCCc-Cccccccccc
Q 007735 267 HVGQSYSFLVTMDQNASTDYYIVASARFVNESQ--W-KRVTGVAILHYTNSKG--KARGPLPEGPNDEF-DKTFSMNQAR 340 (591)
Q Consensus 267 ~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~--~-~~~~~~ail~y~~~~~--~~~~~~p~~p~~~~-~~~~~~~~~~ 340 (591)
+|||||||+|++++.+|++|+|+.......... . .......|+++..... ..+..+|......+ .........+
T Consensus 331 ~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~~ 410 (612)
T 2g23_A 331 APAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGH 410 (612)
T ss_dssp CTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEE
T ss_pred CCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccccce
Confidence 999999999999987776899887643111100 0 0011123555543221 11112222100000 0000000000
Q ss_pred ccccccccCCCCCCCCCCCCcCccceeEEEEEecCC-------C-------cccCC-eeEEEEcCeeccCCCCchhhhcc
Q 007735 341 SIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKP-------P-------EMIDG-KRRATLSGISFVNPSTPIRLADW 405 (591)
Q Consensus 341 ~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~-------~-------~~~~g-~~~~~iNg~s~~~p~~P~l~~~~ 405 (591)
.+. .+.. |...+ ...-.+.+.+.... + ...+| ...|+|||..|.++
T Consensus 411 r~~-~~~~----~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~~~--------- 471 (612)
T 2g23_A 411 RLI-VLTP----PGTKG-----SGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFNDG--------- 471 (612)
T ss_dssp EEE-EECC----TTCTT-----STTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTTSC---------
T ss_pred eEE-eecc----ccccc-----cccccceeeccccccccccccccccceeeeccCCceeEEEECCccCCCC---------
Confidence 000 0000 00000 00000011110000 0 00122 23577777766421
Q ss_pred ccccccccCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCC---C--------
Q 007735 406 FKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTD---N-------- 474 (591)
Q Consensus 406 ~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~---~-------- 474 (591)
..+.++.|++|+|+|.|.+.+.|||||||+.|+|++++.+.++. .
T Consensus 472 ------------------------~~~~v~~G~~v~w~l~N~~~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~ 527 (612)
T 2g23_A 472 ------------------------LGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPV 527 (612)
T ss_dssp ------------------------CCEEEETTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCE
T ss_pred ------------------------CceEecCCCEEEEEEEeCCCCCCCeEEcCceEEEecccCcccccccccccCccccc
Confidence 12356789999999999998999999999999999986432210 0
Q ss_pred -----CCCCCCCCCCCccceEEeCCCcEEEEEEEeC-CccceeeecccccchhccceEEEEEecCC
Q 007735 475 -----SRGTYNKWDGIARTTTQVYPGAWTAILVSLD-NVGIWNLRTENLDSWYLGQETYVRVVNPE 534 (591)
Q Consensus 475 -----~~~~~n~~~p~~rDTv~Vpp~g~~~irf~ad-NpG~W~~HCHil~H~~~GM~~~~~V~~p~ 534 (591)
....++..++.|||||.|+|+++++|+|++| |||.|+|||||++|++.|||..|+|...+
T Consensus 528 ~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~V~p~~ 593 (612)
T 2g23_A 528 RLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp EEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEEEEECHH
T ss_pred ccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCceEEEECchh
Confidence 0023456677899999999999999999999 99999999999999999999999997554
No 18
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=4.8e-55 Score=514.28 Aligned_cols=456 Identities=12% Similarity=0.139 Sum_probs=321.5
Q ss_pred cccCCceEEEEEEEEEEEe--cCCC--------------------------eeeEEE-------EECCC--------CCC
Q 007735 21 CSAADLFVYFDFEVSYITA--SPLG--------------------------VPQQVI-------AINGK--------FPG 57 (591)
Q Consensus 21 ~~~~~~~~~~~~~v~~~~~--~~dG--------------------------~~~~~~-------~~Ng~--------~pg 57 (591)
..+.+.+|+|.+.|.+... .|.| +.++.+ +||+. +||
T Consensus 15 ~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PG 94 (1065)
T 2j5w_A 15 TPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLG 94 (1065)
T ss_dssp -----CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSC
T ss_pred cccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcC
Confidence 5555678999999988754 3332 233444 57877 999
Q ss_pred CcEEeeCCCEEEEEEEECCCCCceeeecCccCC----CCCCCCCCCC---CCCccCCCCcEEEEEEeCCc---------e
Q 007735 58 PTINVTTNNNVVVNVRNKLDESLLIHWSGIQQR----RSSWQDGLLG---TNCPIPPKWNWTYQFQVKDQ---------V 121 (591)
Q Consensus 58 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~----~~~~~DGv~~---tq~~I~PG~~~~Y~f~~~~~---------~ 121 (591)
|+||+++||+|+|+|+|+|+++++|||||++++ +.+|+||+++ |||+|+||++|+|+|+++++ +
T Consensus 95 P~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~a 174 (1065)
T 2j5w_A 95 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNC 174 (1065)
T ss_dssp CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSE
T ss_pred CeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCc
Confidence 999999999999999999999999999999986 5578888884 79999999999999999754 5
Q ss_pred eeeEEecChhh--hhhcCceeeEEEecCCCCCCCCC-CCCCcceEEec------ccccCchHHHHHHh-hcCCCC-----
Q 007735 122 GSFFYFPSLHF--QRASGGFGGFIINNRAIIPIPFD-TPDGDITILIG------DWYTRNHTALRKTL-DAGKGL----- 186 (591)
Q Consensus 122 Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~p~~-~~d~e~~l~l~------d~~~~~~~~~~~~~-~~~~~~----- 186 (591)
||||||||.+. |+++||+|+|||++++....|.+ .+|+|++|+++ ||++.+. +.... +.+...
T Consensus 175 GT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~--~~~~~~~p~~~~~~~~~ 252 (1065)
T 2j5w_A 175 VTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDN--IKTYCSEPEKVDKDNED 252 (1065)
T ss_dssp EEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHH--HHHHCSCGGGCCTTCHH
T ss_pred eEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccch--hhhhhcCcccccccccc
Confidence 99999999875 56899999999999876544432 45889999999 6766432 11111 111000
Q ss_pred --CCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCc-ceEEEEEeCCeeEEEeecCCceeeeeeeE
Q 007735 187 --GMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQQNYTS 263 (591)
Q Consensus 187 --~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~ 263 (591)
..++.++|||+.+ +..+.++|++|++|||||+|+|.. ..+.|+|+||+|+ ++|..+|+
T Consensus 253 ~~~~~~~~~iNG~~~-----------~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~--------v~p~~~dt 313 (1065)
T 2j5w_A 253 FQQSNRMYSVNGYTF-----------GSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT--------NKNYRIDT 313 (1065)
T ss_dssp HHHHTEEEEETTEET-----------TCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE--------ETTEEESE
T ss_pred ccccCcEEEECCccC-----------CCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE--------ECCeeecE
Confidence 0245799999985 234789999999999999999976 6899999999999 35678999
Q ss_pred EEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccccc
Q 007735 264 LDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIR 343 (591)
Q Consensus 264 v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~ 343 (591)
+.|+|||||||+|++++ +| +|+|+++...... ....+.++|.+...+.+.+.|..+. ... .+.+++++.
T Consensus 314 v~I~pGer~dVlv~~~~-pG-~y~i~~h~~~h~~-----~Gm~~~~~V~~~~~~~~~~~~~g~~---~~~-~~i~A~e~~ 382 (1065)
T 2j5w_A 314 INLFPATLFDAYMVAQN-PG-EWMLSCQNLNHLK-----AGLQAFFQVQECNKSSSKDNIRGKH---VRH-YYIAAEEII 382 (1065)
T ss_dssp EEECBTCEEEEEEECCS-CE-EEEEEECSHHHHH-----TTCEEEEEEECSCCCCCCCCCTTSE---EEE-EEEEEEEEE
T ss_pred EEECCCcEEEEEEEeCC-Ce-eEEEEecCcchhh-----CCCEEEEEEecCCCccccccccccc---eeE-EEEeceecc
Confidence 99999999999999997 67 9999998754322 2456888887765443333332211 112 356788899
Q ss_pred cccccCCC------CCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCC
Q 007735 344 WNVSASGA------RPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFP 417 (591)
Q Consensus 344 ~~l~~~~~------~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~ 417 (591)
|++.+... ++++++++ .+.+ |.+... .++++.+..++ ++|.+ ++|+.+.+
T Consensus 383 wdy~~~~~~~~~~~~~~~~~s~-------~~~~-l~~~~~-~ig~~y~k~v~-~~y~d--------------~~f~~~~~ 438 (1065)
T 2j5w_A 383 WNYAPSGIDIFTKENLTAPGSD-------SAVF-FEQGTT-RIGGSYKKLVY-REYTD--------------ASFTNRKE 438 (1065)
T ss_dssp EESCTTSBCTTTCCBTTCTTCT-------THHH-HCCBTT-BCCSEEEEEEE-EEESS--------------TTCCSBCC
T ss_pred cccCCCCcccccccccCCCccc-------chhh-hccCCc-ccCceEeeeee-ecccC--------------CceEEcCc
Confidence 99887653 34555432 1112 232222 46667666666 66642 33443333
Q ss_pred CCCCCCCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcE
Q 007735 418 TKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAW 497 (591)
Q Consensus 418 ~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~ 497 (591)
..|.......-.+++.++.|++++++|+|.....|+||+||++|++++.|. .+.... .+..+...+++..|.||+.
T Consensus 439 ~~~~~~~~g~lgpvi~a~~gd~i~i~f~N~~~~~~s~h~hG~~f~~~~~g~-~~~~~~---~~~~~~~~~~~~~v~Pg~~ 514 (1065)
T 2j5w_A 439 RGPEEEHLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEGT-YYSPNY---NPQSRSVPPSASHVAPTET 514 (1065)
T ss_dssp CCGGGGGGTTSCCCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGGGCSB-CCBCC----------CCCCSSCBCTTCE
T ss_pred CCcccccccccCceEEEeCCCEEEEEEEECCCCCccCcccceeeeccCCCc-cccccc---ccccCCccCCCcccCCCCc
Confidence 222211222335788999999999999999999999999999999988753 221110 0111233455566788887
Q ss_pred EEEEEEe---CCcc-------ceeeeccccc--chhccceEEEEEecCCCC
Q 007735 498 TAILVSL---DNVG-------IWNLRTENLD--SWYLGQETYVRVVNPEAT 536 (591)
Q Consensus 498 ~~irf~a---dNpG-------~W~~HCHil~--H~~~GM~~~~~V~~p~~~ 536 (591)
.+.++.. +.|| .|+||+|+.. .++.|+...+.|..+...
T Consensus 515 ~~y~w~v~~~~~p~~~dp~c~~~~y~s~vd~~~d~~sGLiGpllic~~~~l 565 (1065)
T 2j5w_A 515 FTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKGSL 565 (1065)
T ss_dssp EEEEEECCGGGSCCSSSCSEEEEEEECBSSHHHHHHHTCEEEEEEECTTCB
T ss_pred EEEEEEccCCcCCCCCCCCeeEEEEeccCCcccccccccccceEEeccccc
Confidence 6666654 3565 7999999855 567899999999876644
No 19
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=6.3e-53 Score=434.26 Aligned_cols=271 Identities=22% Similarity=0.308 Sum_probs=225.6
Q ss_pred ceEEEEEEEEEEEecC-CCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC-CCC
Q 007735 26 LFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TNC 103 (591)
Q Consensus 26 ~~~~~~~~v~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~ 103 (591)
.+++|+|++++..+.+ +|..+++|+|||++|||+|+|++||+|+|+|+|.++++++|||||+++..+.++||+|+ |||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 3799999999999877 58899999999999999999999999999999999999999999999988889999998 999
Q ss_pred ccCCCCcEEEEEEeCCceeeeEEecChhhhh---hcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHHHHh
Q 007735 104 PIPPKWNWTYQFQVKDQVGSFFYFPSLHFQR---ASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTL 180 (591)
Q Consensus 104 ~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~---~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~ 180 (591)
+|+||++++|+|++ +++||||||||...+. .+||+|+|||++++..+.+. .+|+|++|+++||+++..... .
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~~---~ 155 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANKP---G 155 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTCT---T
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeecccccccc---c
Confidence 99999999999999 6999999999987543 58999999999875432211 458999999999998633211 1
Q ss_pred hcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCce-eee
Q 007735 181 DAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYT-VQQ 259 (591)
Q Consensus 181 ~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~-~p~ 259 (591)
..+.....++.++|||+.++. ...+++++|++|||||+|++.. .+.|||+||+|+||+.||.++ +|.
T Consensus 156 ~~~~~~~~~d~~~ING~~~~~-----------~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~ 223 (318)
T 3g5w_A 156 EGGIPGDVFDYYTINAKSFPE-----------TQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPI 223 (318)
T ss_dssp CCCCTTCCCCEEEETTBCBTS-----------SCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEE
T ss_pred cCCCCCCcCcEEEEcCcCCCC-----------CccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCc
Confidence 112223357899999998732 2559999999999999999976 799999999999999999998 689
Q ss_pred eeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccc-cCCCcceEEEEEecCCC
Q 007735 260 NYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNES-QWKRVTGVAILHYTNSK 315 (591)
Q Consensus 260 ~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~-~~~~~~~~ail~y~~~~ 315 (591)
..|++.|.||||+||++++++ +| .|.++++....... ........++++|.+..
T Consensus 224 ~~dtv~l~pger~~v~~~a~~-pG-~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 224 KGDTVLIGPGERYDVILNMDN-PG-LWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EESEEEECTTCEEEEEEECCS-CS-EEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred cccEEEECCCCEEEEEEECCC-Ce-eEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 999999999999999999995 68 89999987533211 00113456899998753
No 20
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=3.9e-55 Score=495.67 Aligned_cols=239 Identities=15% Similarity=0.215 Sum_probs=179.7
Q ss_pred EEEEEEEEecCC-CeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCC----CCCCCCCCC---CCC
Q 007735 31 DFEVSYITASPL-GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQR----RSSWQDGLL---GTN 102 (591)
Q Consensus 31 ~~~v~~~~~~~d-G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~----~~~~~DGv~---~tq 102 (591)
.+.+++...... |.+++.|+ ++|||+|||++||+|+|+|+|+|+++++|||||+++. +.+++||++ .||
T Consensus 50 ~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~~DG~p~~Dg~~~~~vtq 126 (742)
T 2r7e_A 50 TLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKASEGAEYDDQTSQREKED 126 (742)
T ss_dssp CCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSSSSCCCSSCSCCSSSSSS
T ss_pred EEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCccccCCccCCCCccccccc
Confidence 344444444443 55555554 8999999999999999999999999999999999874 445556555 379
Q ss_pred CccCCCCcEEEEEEeCC---------ceeeeEEecChhh--hhhcCceeeEEEecCCCCCCCCCCCCCcceEEecc----
Q 007735 103 CPIPPKWNWTYQFQVKD---------QVGSFFYFPSLHF--QRASGGFGGFIINNRAIIPIPFDTPDGDITILIGD---- 167 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~~---------~~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d---- 167 (591)
|+|+||++|+|+|++++ |+||||||||.+. |+.+||+|+|||+++...........+|++|++++
T Consensus 127 ~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~de~ 206 (742)
T 2r7e_A 127 DKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFDEG 206 (742)
T ss_dssp SSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCCCS
T ss_pred CcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeecccCC
Confidence 99999999999999853 4699999999875 89999999999999765332211223788887753
Q ss_pred --cccCchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcc-eEEEEEeCC
Q 007735 168 --WYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIST-SLNFRIQNH 244 (591)
Q Consensus 168 --~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh 244 (591)
||++........+........++.++|||+.. ++.+.+++++|++|||||+|+|... .|.|||+||
T Consensus 207 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~-----------~~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh 275 (742)
T 2r7e_A 207 KSWHSETKNSLMQDRDAASARAWPKMHTVNGYVN-----------RSLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGH 275 (742)
T ss_dssp SSSCCCCCC-------CCSCCCCCCCCEETTBCT-----------BCCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTC
T ss_pred ccccccccccccccCCCccccccCceEEECCccC-----------CCCcceEEcCCCEEEEEEEeCCCCCcceEEEECCC
Confidence 66653221100111111122357899999985 2347899999999999999999875 789999999
Q ss_pred eeEEEeecCCceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeec
Q 007735 245 NLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASAR 293 (591)
Q Consensus 245 ~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~ 293 (591)
+|+|++. .+|++.|.|||+++|++++++ +| .|.++++..
T Consensus 276 ~f~Vvg~--------~~Dtv~v~Pg~~~~v~~~~~~-pG-~w~~hCH~~ 314 (742)
T 2r7e_A 276 TFLVRNH--------RQASLEISPITFLTAQTLLMD-LG-QFLLFCHIS 314 (742)
T ss_dssp CCEETTE--------ECCSCCCCTTCCCEEEECCCS-CS-EECCCCCSS
T ss_pred EEEEEeE--------ecceEEeCCCcEEEEEEEeCC-Ce-eEEEEeCCh
Confidence 9999853 367889999999999999995 67 888877653
No 21
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=1e-51 Score=429.79 Aligned_cols=271 Identities=21% Similarity=0.401 Sum_probs=224.8
Q ss_pred ceEEEEEEEEEEEecCC-CeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC-CCC
Q 007735 26 LFVYFDFEVSYITASPL-GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TNC 103 (591)
Q Consensus 26 ~~~~~~~~v~~~~~~~d-G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~ 103 (591)
.+++|+|++++.++.++ |.++.+|+|||++|||+|+|++||+|+|+|+|.++++++|||||+++..++|+||+|+ |||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 36899999999998875 9999999999999999999999999999999999999999999999998889999998 999
Q ss_pred ccCCCCcEEEEEEeCCceeeeEEecChhh--hhh-cCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHHHHh
Q 007735 104 PIPPKWNWTYQFQVKDQVGSFFYFPSLHF--QRA-SGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKTL 180 (591)
Q Consensus 104 ~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~--q~~-~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~ 180 (591)
+|.||++|+|+|++ +++||||||||... |+. +||+|+|||+++.....+. ..|+|++++++||++..... ..
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~-~~d~e~~l~l~d~~~~~~~~---~~ 156 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIEK-RVTKDVIMMMSTWESAVADK---YG 156 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTGG-GCSEEEEEEEEEECGGGTTC---TT
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCcccccc-cCCceEEEEeeheecccccc---cC
Confidence 99999999999999 58999999999764 888 9999999999865432221 34789999999998742111 00
Q ss_pred hcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCcee-ee
Q 007735 181 DAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTV-QQ 259 (591)
Q Consensus 181 ~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~-p~ 259 (591)
..+.....++.++|||+.++. .+.+++++|++|||||+|++.. .+.|+|+||+|+||+.||.+++ |.
T Consensus 157 ~~g~~~~~~~~~~ING~~~~~-----------~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~ 224 (339)
T 2zwn_A 157 EGGTPMNVADYFSVNAKSFPL-----------TQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPY 224 (339)
T ss_dssp CCCSTTSCCCEEEETTBCTTS-----------SCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEE
T ss_pred CCCCCccccceEEEccccCCC-----------cccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCc
Confidence 111222257899999998621 2569999999999999999955 8999999999999999999986 88
Q ss_pred eeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccc-cccCCCcceEEEEEecCCC
Q 007735 260 NYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVN-ESQWKRVTGVAILHYTNSK 315 (591)
Q Consensus 260 ~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~-~~~~~~~~~~ail~y~~~~ 315 (591)
..|++.|.||||+||+|++++ +| .|.++++..... ..........++++|.+..
T Consensus 225 ~~dtv~l~pg~r~~v~~~~~~-pG-~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 225 YADTVLVSPGERYDVIIEADN-PG-RFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EESEEEECTTCEEEEEEECCS-CS-EEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEEEEECCCCEEEEEEEeCC-Ce-eEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 899999999999999999986 57 798988765421 1000123447899998653
No 22
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=9.5e-49 Score=405.43 Aligned_cols=263 Identities=20% Similarity=0.260 Sum_probs=221.9
Q ss_pred ccCCceEEEEEEEEEEEecC-CCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC--CCceeeecCccCCCCCCCCCC
Q 007735 22 SAADLFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD--ESLLIHWSGIQQRRSSWQDGL 98 (591)
Q Consensus 22 ~~~~~~~~~~~~v~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~--~~~siH~HG~~~~~~~~~DGv 98 (591)
.+.+.+++|+|++++...++ ||.++.+|+|||++|||+|++++||+|+|+|+|.++ .++++||||+. .+||+
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~-----~~dG~ 107 (327)
T 1kbv_A 33 RDYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT-----GQGGG 107 (327)
T ss_dssp CSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGG
T ss_pred cCCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc-----cCCCC
Confidence 34557899999999999987 799999999999999999999999999999999997 58999999984 37887
Q ss_pred CCCCCccCCCCcEEEEEEeCCceeeeEEecCh---hhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHH
Q 007735 99 LGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL---HFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTA 175 (591)
Q Consensus 99 ~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~ 175 (591)
+. ...|.||++++|+|++ +|+||||||||. +.|+.+||+|+|||++++. . +.+|+|++++++||++++...
T Consensus 108 ~~-~~~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~--~--p~~d~e~~l~~~d~~~~~~~~ 181 (327)
T 1kbv_A 108 AA-ATFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG--L--PKVDKEFYIVQGDFYTKGKKG 181 (327)
T ss_dssp TT-TTCBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC--C--CCCSEEEEEEEEEECBSSCTT
T ss_pred Cc-ceeecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC--C--CCCceEEEEEeeeeeccCccc
Confidence 75 2359999999999999 689999999996 6899999999999998653 2 245899999999999874210
Q ss_pred --------HHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeE
Q 007735 176 --------LRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLL 247 (591)
Q Consensus 176 --------~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~ 247 (591)
+.... ...++.++|||+.++++ ..+.+++++||+|||||+|+|..+.+.|+|+||+|+
T Consensus 182 ~~g~~~~~~~~~~-----~~~~~~~~iNG~~~~~~---------~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~ 247 (327)
T 1kbv_A 182 AQGLQPFDMDKAV-----AEQPEYVVFNGHVGALT---------GDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFD 247 (327)
T ss_dssp CCEEECBCHHHHH-----HTCCSEEEETTSTTTTS---------GGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBS
T ss_pred cccccccChhHhc-----cCCCceEEEcCcccCCC---------CceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEE
Confidence 11111 12468999999997542 126799999999999999999888999999999999
Q ss_pred EEeecCCceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCC
Q 007735 248 LAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSK 315 (591)
Q Consensus 248 via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (591)
||+.||.+++|..++++.|+||||+||+|++++ +| .|+|+++...... +....|+++|.+..
T Consensus 248 vi~~DG~~~~p~~~d~l~l~pGer~dv~v~~~~-pG-~y~l~~h~~~~~~----~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 248 KVYVEGGKLINENVQSTIVPAGGSAIVEFKVDI-PG-NYTLVDHSIFRAF----NKGALGQLKVEGAE 309 (327)
T ss_dssp EEEGGGSSCEECSBSEEEECTTEEEEEEEEECS-CE-EEEEEESSTHHHH----HSSCEEEEEEESCC
T ss_pred EEEcCCCcCCCCceeEEEECCCCEEEEEEEeCC-Ce-EEEEEeccccccc----cCCcEEEEEECCCC
Confidence 999999999999999999999999999999996 68 9999998754321 13468999998754
No 23
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.6e-49 Score=429.76 Aligned_cols=401 Identities=15% Similarity=0.084 Sum_probs=264.5
Q ss_pred cCCceEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCC
Q 007735 23 AADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN 102 (591)
Q Consensus 23 ~~~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq 102 (591)
+++.+++++++++.+...++ ..+++|||++ ||+|+|++||+|+++|+|.+...+++||||... .++
T Consensus 24 ~~~~~~~~~~~~~~~~~~f~---g~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~----------~~~ 89 (447)
T 2dv6_A 24 HAPVVFTLRTGIAEGRMVYI---GVGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA----------RSA 89 (447)
T ss_dssp CCCEEEEEEEEEETTEEEEE---EESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE----------ECC
T ss_pred CCCceEEEEEEecccEEEEe---ccceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc----------ccc
Confidence 44456667766655444443 3567999999 999999999999999999998889999999631 157
Q ss_pred CccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCC-----CCCCcceEEecccccCchHH--
Q 007735 103 CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFD-----TPDGDITILIGDWYTRNHTA-- 175 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~-----~~d~e~~l~l~d~~~~~~~~-- 175 (591)
|+|.||++++|.|++ .++||||||||...|+.+||+|.|+|+++.......+ ....+++..+ |+.......
T Consensus 90 ~~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~~ 167 (447)
T 2dv6_A 90 IVNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRID 167 (447)
T ss_dssp CBCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEEE
T ss_pred eecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEEE
Confidence 999999999999998 4799999999998999999999999998754221000 0011111111 111110000
Q ss_pred HH-HHhhcCC-CCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCC-cceEEEEEeCCeeEEEeec
Q 007735 176 LR-KTLDAGK-GLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGI-STSLNFRIQNHNLLLAETE 252 (591)
Q Consensus 176 ~~-~~~~~~~-~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~-~~~~~~~i~gh~~~via~D 252 (591)
+. ....... .....+.++|||+.. .|++++++|++|||||+|.+. ...+.+++||. ++.|
T Consensus 168 l~~~~~~~~~~~g~~~~~~~~NG~~p-------------gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~D 230 (447)
T 2dv6_A 168 LETVEVKGQLDDNTTYTYWTFNGKVP-------------GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPG 230 (447)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTBBS-------------CCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGG
T ss_pred EEEEEEEEeccCCceeEEEEECCccC-------------CCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCC
Confidence 00 0000000 111246799999863 289999999999999999985 34566777664 3689
Q ss_pred CCceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCc
Q 007735 253 GSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDK 332 (591)
Q Consensus 253 G~~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~ 332 (591)
|.+ +++.|.||||+++++++++ +| +||++++....... ......+.+.|.... ++| .. +.
T Consensus 231 G~~------~~~~i~pG~~~~~~~~~~~-~G-~~~yh~h~~~~~~~--~~~Gl~g~l~v~~~~-----~~P---~~--d~ 290 (447)
T 2dv6_A 231 GAA------AFTQTDPGEETVVTFKALI-PG-IYVYHCATPSVPTH--ITNGMYGLLLVEPEG-----GLP---QV--DR 290 (447)
T ss_dssp GGG------GGCCBCTTCEEEEEEECCS-CE-EEEEECCSSSHHHH--HHTTCEEEEEEECTT-----CSC---CC--SE
T ss_pred CCC------ccEEeCCCCEEEEEEECCC-Ce-EEEEEeCCCChHHH--HhCCCEEEEEEeCCC-----CCC---CC--Ce
Confidence 973 2345999999999999986 57 99999875311000 012235666665432 122 11 21
Q ss_pred ccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccc
Q 007735 333 TFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAY 412 (591)
Q Consensus 333 ~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~ 412 (591)
...+.. . .+..... ....+.. .. .+... .......|.|||+.+...
T Consensus 291 ~~~~~~-~--~~~~~~~---~~~~g~~-----~~----~~~~~---~~~~~~~~~iNG~~~~~~---------------- 336 (447)
T 2dv6_A 291 EFYVMQ-G--EIYTVKS---FGTSGEQ-----EM----DYEKL---INEKPEYFLFNGSVGSLT---------------- 336 (447)
T ss_dssp EEEEEE-E--EECBSSC---TTCCEEC-----CB----BHHHH---HTTCCSEEEETTSTTCCC----------------
T ss_pred eEEEEe-c--ccccCCc---ccccccc-----cC----ChHHh---hccCCCEEEECCcccCCC----------------
Confidence 111100 0 0110000 0000000 00 00000 011124688999875311
Q ss_pred cCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCC-CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCC-ccceE
Q 007735 413 KLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNND-TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGI-ARTTT 490 (591)
Q Consensus 413 ~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~-~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~-~rDTv 490 (591)
....+.++.|++++|+|.|.+ ...||||||||+|+||+.+++.. ..|. +|||+
T Consensus 337 ---------------~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~----------~~p~~~~dtv 391 (447)
T 2dv6_A 337 ---------------RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVV----------SPPLIGVQTV 391 (447)
T ss_dssp ---------------CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSS----------SCCEEEESEE
T ss_pred ---------------CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCccc----------CCCcccccEE
Confidence 012356778999999999986 46899999999999999964321 2344 79999
Q ss_pred EeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEecCCC
Q 007735 491 QVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEA 535 (591)
Q Consensus 491 ~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~~ 535 (591)
.|+||+++.|+|++||||.|+||||+++|+..||+..++|..+..
T Consensus 392 ~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 392 SVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp EECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred EECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCCC
Confidence 999999999999999999999999999999999999999976543
No 24
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=7.4e-47 Score=384.34 Aligned_cols=236 Identities=19% Similarity=0.246 Sum_probs=205.0
Q ss_pred CceEEEEEEEEEEEecC-CCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC-CC
Q 007735 25 DLFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TN 102 (591)
Q Consensus 25 ~~~~~~~~~v~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq 102 (591)
..+++|+|++++..... +|..+++|+|||++|||+|++++||+|+|+|+|.++++++|||||++ .+++||+|+ +|
T Consensus 32 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~---~~~~DG~p~~~~ 108 (288)
T 3gdc_A 32 RTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVH---RATMDGTPGIGA 108 (288)
T ss_dssp CEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCC---CGGGSCCTTSTT
T ss_pred CcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEecccc---ccccCCCCCccc
Confidence 34689999999988765 49999999999999999999999999999999999999999999996 368999998 99
Q ss_pred CccCCCCcEEEEEEeCCceeeeEEecChh---hhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHHHH
Q 007735 103 CPIPPKWNWTYQFQVKDQVGSFFYFPSLH---FQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKT 179 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~~~ 179 (591)
|+|+||++++|+|++ +++||||||||.. .|+.+||+|+|||++++.. ...|+|++|+++||+.++
T Consensus 109 ~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~----~~~d~e~~l~~~d~~~~~------- 176 (288)
T 3gdc_A 109 GSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGR----PPADDEMVMVMNGYNTDG------- 176 (288)
T ss_dssp CSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCC----CCCSEEEEEEEEEECCSS-------
T ss_pred eeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccC----CCCcceEEEEEeeEecCC-------
Confidence 999999999999999 6999999999986 7999999999999987653 234799999999998762
Q ss_pred hhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcc-eEEEEEeCCeeEEEeecCCceee
Q 007735 180 LDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIST-SLNFRIQNHNLLLAETEGSYTVQ 258 (591)
Q Consensus 180 ~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~~~p 258 (591)
+ ..++.++|||+.+.+ ..+.+++++|++|||||+|++... .|.|||+||.|+|++.++....|
T Consensus 177 ---g---~~~~~~~iNG~~~~~----------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~~ 240 (288)
T 3gdc_A 177 ---G---DDNEFYSVNGLPFHF----------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPS 240 (288)
T ss_dssp ---T---TCCSEEEETTSTTHH----------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSCS
T ss_pred ---C---CCcceEEECcccccc----------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCCC
Confidence 1 136799999998621 124699999999999999998653 79999999999999855444457
Q ss_pred eeeeEEEEccccEEEEEEEeCCCCCcceEEEEeec
Q 007735 259 QNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASAR 293 (591)
Q Consensus 259 ~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~ 293 (591)
...|++.|.||||++|+++++ .+| .|.++++..
T Consensus 241 ~~~Dtv~v~pg~~~~v~~~~~-~pG-~~~~hCH~~ 273 (288)
T 3gdc_A 241 EYTDTISQVQGQRGILELRFP-YPG-KFMFHAHKT 273 (288)
T ss_dssp EEESEEEEETTCEEEEEECCC-SCE-EEEEECSSH
T ss_pred ceeeEEEeCCCceEEEEEECC-CCE-EEEEEecCh
Confidence 889999999999999999999 568 899988754
No 25
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=2.6e-48 Score=457.13 Aligned_cols=412 Identities=14% Similarity=0.090 Sum_probs=265.7
Q ss_pred eeeEEEEECCCCCC--CcEEeeCCCEEEEEEEECCCCCceeeecCccCCC-CCCCCCCCC-CCCccCCCCcEEEEEEeCC
Q 007735 44 VPQQVIAINGKFPG--PTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRR-SSWQDGLLG-TNCPIPPKWNWTYQFQVKD 119 (591)
Q Consensus 44 ~~~~~~~~Ng~~pg--P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~-~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~ 119 (591)
..+.+.++||++|| |+|++++||+|+++|.|. .+.+||||++|.+ +.++||++. | |+|.||.+++|+|++ +
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-D 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-C
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-C
Confidence 56799999999999 889999999999999976 5569999999998 999999997 7 999999999999998 6
Q ss_pred ceeeeEEecChhhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEe----cccccCchHHHHHHh-h-cCCCCCCCceEE
Q 007735 120 QVGSFFYFPSLHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILI----GDWYTRNHTALRKTL-D-AGKGLGMPDGVL 193 (591)
Q Consensus 120 ~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l----~d~~~~~~~~~~~~~-~-~~~~~~~~~~~l 193 (591)
++||||||||.+.|+.+||+|.++|++......++..++.|.+++| .||++.+...+...+ + .+. .|...+
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~---~p~~~~ 767 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQ---NVSNAF 767 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTC---CCCCTT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCcc---Ccccee
Confidence 9999999999999999999999999987554445446688999999 899998665443221 1 121 266777
Q ss_pred EcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEE----------EeecCCceeeeeeeE
Q 007735 194 INGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLL----------AETEGSYTVQQNYTS 263 (591)
Q Consensus 194 ING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v----------ia~DG~~~~p~~~d~ 263 (591)
+|+... .+ |++|++ ...+.+.+|+|++ +++|| .+
T Consensus 768 ~n~~~~---------------~i----G~tY~k---------~~y~~~~d~tft~~~~r~~~~~~v~~pG--------P~ 811 (1065)
T 2j5w_A 768 LDKGEF---------------YI----GSKYKK---------VVYRQYTDSTFRVPVERKAEEEHLGILG--------PQ 811 (1065)
T ss_dssp TCCTTT---------------CC----CSEEEE---------EEEEEESSTTCCSBCCCCGGGGGGTTSC--------CC
T ss_pred ecCCCc---------------cc----cceEee---------eEEEEEcCCcceecccCCccccccCCCC--------CE
Confidence 787653 12 899998 3557899999998 56666 47
Q ss_pred EEEccccEEEEEEEeCCCCCcceEEEEeeccccc-----ccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcc-ccc-
Q 007735 264 LDIHVGQSYSFLVTMDQNASTDYYIVASARFVNE-----SQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKT-FSM- 336 (591)
Q Consensus 264 v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~-----~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~-~~~- 336 (591)
|.+.+|||++|.++-+ .+. .|.|+.+...... ..+.....+.+..|.. .+|.+..|. +.. |..
T Consensus 812 I~v~~Gd~v~v~l~N~-~~~-~~sih~HGl~~~~~~~~~i~PG~~~ty~~~~~~~-----~gp~~~~~~---~gt~wYhs 881 (1065)
T 2j5w_A 812 LHADVGDKVKIIFKNM-ATR-PYSIHAHGVQTESSTVTPTLPGETLTYVWKIPER-----SGAGTEDSA---CIPWAYYS 881 (1065)
T ss_dssp EEEETTEEEEEEEEEC-SSS-CBCCEESSCBCSCSCCCCBCTTCEEEEEEECCGG-----GSCCTTSCS---EEEEEEEC
T ss_pred EEEecCCEEEEEEEeC-CCC-CceEeeccccccCCCCceeCCCCeEEEEEEecCc-----cCCccccCC---ceEEEEec
Confidence 9999999999998855 334 8888876521111 0011112222222221 112222211 011 100
Q ss_pred --ccccccccccccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccC-C-CCchhhhccccccccc
Q 007735 337 --NQARSIRWNVSASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVN-P-STPIRLADWFKVKGAY 412 (591)
Q Consensus 337 --~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~-p-~~P~l~~~~~~~~g~~ 412 (591)
...+.+...|... ....+.+.........+.++.+..+.. ..++......|+.+|.. | ..+++...+......+
T Consensus 882 h~~~~~q~~~GL~G~-liV~~~~~l~~~~~~~d~D~~l~~~~~-d~~~~~y~~~n~~~~~~~P~~v~~~~~~~~~~~~~~ 959 (1065)
T 2j5w_A 882 TVDQVKDLYSGLIGP-LIVCRRPYLKVFNPRRKLEFALLFLVF-DENESWYLDDNIKTYSDHPEKVNKDDEEFIESNKMH 959 (1065)
T ss_dssp CTTHHHHHHTTCEEE-EEEECCC-----CCCCEEEEEEEEEEE-EGGGSTTHHHHHHHHCSCGGGCCTTCHHHHHHTEEE
T ss_pred CCChHHhhhccccce-eEecCcccccccCCCcceEEEEEEEee-cCCcceeeccCcccccCCccccCcchhhhhccCceE
Confidence 0011111001000 000000000000011223332221100 00000001123333331 1 1222111000000001
Q ss_pred cCCCCCCCCCCCCCcceEEEeccCCcEEEEEEecCC--CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceE
Q 007735 413 KLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNND--TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTT 490 (591)
Q Consensus 413 ~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~--~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv 490 (591)
. .++.....+..+.++.|++|+|+|.|.+ ...||||||||.|+|++++ |.+|||+
T Consensus 960 ~-------iNG~~~~~~~~~~v~~G~~vr~~l~N~g~~~~~HpfHlHG~~F~vv~~~----------------p~~~DTv 1016 (1065)
T 2j5w_A 960 A-------INGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG----------------VYSSDVF 1016 (1065)
T ss_dssp E-------ETTBCTTCCCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTTT----------------CEEESEE
T ss_pred E-------ECCccCCCCccEEeCCCCEEEEEEEeCCCCCcceeEEEcccEEEEEecC----------------CceeeEE
Confidence 1 1111111234567889999999999985 5789999999999998753 6789999
Q ss_pred EeCCCcEEEEEEEeCCccceeeecccccchhccceEEEEEecCC
Q 007735 491 QVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPE 534 (591)
Q Consensus 491 ~Vpp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p~ 534 (591)
.|+|+++++|+|++||||.|+||||+++|++.|||..++|.+.+
T Consensus 1017 ~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~ 1060 (1065)
T 2j5w_A 1017 DIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNE 1060 (1065)
T ss_dssp EECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC
T ss_pred EECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCc
Confidence 99999999999999999999999999999999999999998664
No 26
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=3.2e-45 Score=395.32 Aligned_cols=268 Identities=18% Similarity=0.227 Sum_probs=221.2
Q ss_pred ccCCceEEEEEEEEEEEec-CCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC--CCceeeecCccCCCCCCCCCC
Q 007735 22 SAADLFVYFDFEVSYITAS-PLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD--ESLLIHWSGIQQRRSSWQDGL 98 (591)
Q Consensus 22 ~~~~~~~~~~~~v~~~~~~-~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~--~~~siH~HG~~~~~~~~~DGv 98 (591)
.+.+.+++|+|++++.++. +||.++.+|+|||++|||+|++++||+|+|+|+|.++ .++++||||+.+ +||+
T Consensus 23 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~ 97 (442)
T 2zoo_A 23 RDHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGG 97 (442)
T ss_dssp CSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGG
T ss_pred cCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCC
Confidence 4566789999999999988 5899999999999999999999999999999999986 499999999853 6887
Q ss_pred CCCCCccCCCCcEEEEEEeCCceeeeEEecC---hhhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHH
Q 007735 99 LGTNCPIPPKWNWTYQFQVKDQVGSFFYFPS---LHFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTA 175 (591)
Q Consensus 99 ~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H---~~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~ 175 (591)
+.+ .+|.||++++|+|++ +++|||||||| +..|+.+||+|+|||++++.. +.+|+|++|+++||+++....
T Consensus 98 ~~~-~~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~~~ 171 (442)
T 2zoo_A 98 AES-SFTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGEFG 171 (442)
T ss_dssp GGG-CCBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTT
T ss_pred Ccc-EEECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCccc
Confidence 752 369999999999998 68999999996 568999999999999986532 245899999999999875310
Q ss_pred -HH-HHhh-cCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeec
Q 007735 176 -LR-KTLD-AGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETE 252 (591)
Q Consensus 176 -~~-~~~~-~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~D 252 (591)
.. ...+ .......++.++|||+.... ...+.+++++|++|||||+|+|....+.|+|+||+|+||+.|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~liNG~~~~~---------~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~D 242 (442)
T 2zoo_A 172 EAGLQPFDMAKAIDEDADYVVFNGSVGST---------TDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVE 242 (442)
T ss_dssp CCEEECBCHHHHHTTCCSEEEETTSTTTT---------SGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGG
T ss_pred ccccccCChhHhccCCCCEEEECCCcCCC---------CCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecC
Confidence 00 0000 00012467899999998621 112689999999999999999988899999999999999999
Q ss_pred CCceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCC
Q 007735 253 GSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSK 315 (591)
Q Consensus 253 G~~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (591)
|.+++|..++++.|.||||+||+|++++ +| .|+++++...... .....++++|.+..
T Consensus 243 G~~~~p~~~~~~~l~pg~r~~v~v~~~~-~G-~y~~~~~~~~~~~----~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 243 GGSLKNHNVQTTLIPAGGAAIVEFKVEV-PG-TFILVDHSIFRAF----NKGALAMLKVEGPD 299 (442)
T ss_dssp GSSCEECSBSEEEECTTEEEEEEEECCS-CE-EEEEEESSTHHHH----TTSCEEEEEEESCC
T ss_pred CccCCCccceEEEECCCeeEEEEEEcCC-CC-eEEEEeccccccc----ccCceEEEEecCCC
Confidence 9999999999999999999999999995 67 9999997654311 13567999998654
No 27
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=7.5e-45 Score=377.79 Aligned_cols=269 Identities=16% Similarity=0.150 Sum_probs=210.4
Q ss_pred cccCCceEEEEEEEEEEEecC-CCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC
Q 007735 21 CSAADLFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL 99 (591)
Q Consensus 21 ~~~~~~~~~~~~~v~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~ 99 (591)
+.+.+.+++|+|++++..+++ +|.++.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++......||.+
T Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~ 102 (333)
T 1mzy_A 26 AASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGG 102 (333)
T ss_dssp CSSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGG
T ss_pred cCCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCC
Confidence 355567899999999999877 5999999999999999999999999999999999 589999999987654555555
Q ss_pred C-CCCccCCCCcEEEEEEeCCceeeeEEecChh-----hhhhcCceeeEEEecCCCCC----CCCCCCCCcceEEecccc
Q 007735 100 G-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH-----FQRASGGFGGFIINNRAIIP----IPFDTPDGDITILIGDWY 169 (591)
Q Consensus 100 ~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~-----~q~~~Gl~G~liV~~~~~~~----~p~~~~d~e~~l~l~d~~ 169 (591)
. + .|.||++++|+|++ +++||||||||.. .|+.+||+|+|||++++..+ .|+ .+|+|++|+++|||
T Consensus 103 ~~~--~i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~ 178 (333)
T 1mzy_A 103 GLT--LINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV-RYDTVYYIGESDHY 178 (333)
T ss_dssp GGC--CBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEEC
T ss_pred cee--EeCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCC-ccchheeeeeeeec
Confidence 4 5 49999999999999 6899999999985 69999999999999865422 122 45899999999999
Q ss_pred cCc--hHHHH----------HHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceE
Q 007735 170 TRN--HTALR----------KTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSL 237 (591)
Q Consensus 170 ~~~--~~~~~----------~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~ 237 (591)
+.. ...+. ..++. .....++.++|||+.... ...+.++|++||+||||++|++....+
T Consensus 179 ~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ING~~~~~---------~~~~~l~v~~Ger~Rl~n~~~~~~~~~ 248 (333)
T 1mzy_A 179 IPKDEDGTYMRFSDPSEGYEDMVAV-MDTLIPSHIVFNGAVGAL---------TGEGALKAKVGDNVLFVHSQPNRDSRP 248 (333)
T ss_dssp CCBCTTSCBCCCSSHHHHHHHHHHH-HTTTCCSEEEETTSTTTT---------SGGGCEEEETTCEEEEEEEESSSCBCE
T ss_pred cCccccccccccccccccccchhHH-hhccCCcEEEECCccccc---------CCCcceEecCCCEEEEEECCCCCcccc
Confidence 831 11110 00010 012457899999998521 113679999999988877776544333
Q ss_pred EEEEeCCeeEEEeecCCceee-e-eeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccc-cccCCCcceEEEEEecCC
Q 007735 238 NFRIQNHNLLLAETEGSYTVQ-Q-NYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVN-ESQWKRVTGVAILHYTNS 314 (591)
Q Consensus 238 ~~~i~gh~~~via~DG~~~~p-~-~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~-~~~~~~~~~~ail~y~~~ 314 (591)
..+++|.|+|++ ||.++++ . .+|++.|.||||+||+|++++ +| +|+++++..... . ....++++|.+.
T Consensus 249 -h~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~-pG-~y~~~ch~~~h~~~-----~Gm~~~~~v~~~ 319 (333)
T 1mzy_A 249 -HLIGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQ-PG-VYAYVNHNLIEAVH-----KGATAHVLVEGE 319 (333)
T ss_dssp -EEETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHHHT-----TCCEEEEEEESC
T ss_pred -EEECCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCC-CE-EEEEecChhhhHhh-----CCCEEEEEEcCC
Confidence 348899999999 9999874 3 489999999999999999996 58 999999875432 2 346689999865
Q ss_pred C
Q 007735 315 K 315 (591)
Q Consensus 315 ~ 315 (591)
.
T Consensus 320 ~ 320 (333)
T 1mzy_A 320 W 320 (333)
T ss_dssp C
T ss_pred C
Confidence 3
No 28
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=2.6e-44 Score=363.43 Aligned_cols=239 Identities=17% Similarity=0.233 Sum_probs=199.3
Q ss_pred cCCceEEEEEEEEEEEecCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCC
Q 007735 23 AADLFVYFDFEVSYITASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN 102 (591)
Q Consensus 23 ~~~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq 102 (591)
+...+|+|+|++++. ..+......+++||++|||+||+++||+|+|+|+|+|+++++|||||++++. ++||++.+|
T Consensus 3 ~~g~~~~~~l~~~~~--~~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~~~t~ 78 (276)
T 3kw8_A 3 AGGEVRHLKMYAEKL--ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTAMNK 78 (276)
T ss_dssp -CCCEEEEEEEEEEC--TTSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCTTTT
T ss_pred CcceEEEEEEEEEeC--CCCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCCcCCc
Confidence 455689999999874 3455555778899999999999999999999999999999999999998864 799999899
Q ss_pred CccCCCCcEEEEEEeCC------------ceeeeEEecCh------hhhhhcCceeeEEEecCCCCCCCCCCCCCcceEE
Q 007735 103 CPIPPKWNWTYQFQVKD------------QVGSFFYFPSL------HFQRASGGFGGFIINNRAIIPIPFDTPDGDITIL 164 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~~------------~~Gt~wYH~H~------~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~ 164 (591)
|+|.||++|+|+|++++ ++||||||||. ..|+.+||+|+|||+++... .+|+|++|+
T Consensus 79 ~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~drE~~l~ 153 (276)
T 3kw8_A 79 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTIV 153 (276)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEEE
T ss_pred CCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCc-----ccccceEEE
Confidence 99999999999999953 37999999997 36999999999999997652 238999999
Q ss_pred ecccccCchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCC
Q 007735 165 IGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNH 244 (591)
Q Consensus 165 l~d~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh 244 (591)
++|| +|||+.+. ..+.++++.|++|||||+|.+.. .+.||||||
T Consensus 154 l~~~------------------------~iNG~~~~-----------~~p~i~v~~G~~vri~l~N~~~~-~Hp~HlHG~ 197 (276)
T 3kw8_A 154 FNDM------------------------TINNRKPH-----------TGPDFEATVGDRVEIVMITHGEY-YHTFHMHGH 197 (276)
T ss_dssp EETT------------------------EETTCCTT-----------CCCCEEEETTCEEEEEEEEESSC-CEEEEETTC
T ss_pred eccc------------------------ccceeccc-----------CCCCEEEecCCEEEEEEecCCCc-ceeEEEccc
Confidence 8765 89999862 35889999999999999999975 899999999
Q ss_pred eeEEEeecCCcee----eeeeeEEEEccccEEEEEEEeCC--CCCcceEEEEeecccccccCCCcceEEEEEecC
Q 007735 245 NLLLAETEGSYTV----QQNYTSLDIHVGQSYSFLVTMDQ--NASTDYYIVASARFVNESQWKRVTGVAILHYTN 313 (591)
Q Consensus 245 ~~~via~DG~~~~----p~~~d~v~i~pGqR~dvlv~~~~--~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~ 313 (591)
.|++++ ||.... +..+|++.|.|||++++++++++ .+| .|+++++...... ....+.+.+..
T Consensus 198 ~f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG-~w~~HCH~~~H~~-----~GM~g~~~V~~ 265 (276)
T 3kw8_A 198 RWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAG-AWMYHCHVQSHSD-----MGMVGLFLVKK 265 (276)
T ss_dssp CEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEECSHHHHH-----TTCEEEEEEEC
T ss_pred eeEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCC-eEEEECCCchHhh-----CCCeEEEEEeC
Confidence 999875 665432 45789999999999999999985 578 9999998643221 22345566543
No 29
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=2e-44 Score=375.16 Aligned_cols=267 Identities=19% Similarity=0.198 Sum_probs=206.8
Q ss_pred cCCceEEEEEEEEEEEe--cCCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC
Q 007735 23 AADLFVYFDFEVSYITA--SPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG 100 (591)
Q Consensus 23 ~~~~~~~~~~~v~~~~~--~~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~ 100 (591)
+...+++|+|++++... .+||.++.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++.+..++||.+.
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~h~~~~h~~~~~~~~~~ 104 (336)
T 1oe1_A 28 SGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPA---TNAMPHNVDFHGATGALGGAK 104 (336)
T ss_dssp CCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCC---CCCccccceECCCCCCCCCcc
Confidence 45578999999999876 4679999999999999999999999999999999997 346777777766566777655
Q ss_pred -CCCccCCCCcEEEEEEeCCceeeeEEecCh----hhhhhcCceeeEEEecCCCCC----CCCCCCCCcceEEecccccC
Q 007735 101 -TNCPIPPKWNWTYQFQVKDQVGSFFYFPSL----HFQRASGGFGGFIINNRAIIP----IPFDTPDGDITILIGDWYTR 171 (591)
Q Consensus 101 -tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~----~p~~~~d~e~~l~l~d~~~~ 171 (591)
++ |.||++++|+|++ +++||||||||. ..|+.+||+|+|||++++..+ .+. .+|+|++|+++|||+.
T Consensus 105 ~~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~-~~D~e~~l~~~D~~~~ 180 (336)
T 1oe1_A 105 LTN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPL-HYDRAYTIGEFDLYIP 180 (336)
T ss_dssp GCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECCC
T ss_pred eEE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcc-cCCceeEeeeeeeeec
Confidence 54 9999999999999 689999999996 479999999999999865422 222 4589999999999984
Q ss_pred ch--HHHH----------HHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEE
Q 007735 172 NH--TALR----------KTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNF 239 (591)
Q Consensus 172 ~~--~~~~----------~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~ 239 (591)
.+ +.+. ..++. .....++.++|||+..+.| ..+.++|++||+||| +|++..+.+.+
T Consensus 181 ~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~~---------~~~~l~v~~GervRl--in~~~~~~~~~ 248 (336)
T 1oe1_A 181 KGPDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGALT---------GANALTAKVGETVLL--IHSQANRDTRP 248 (336)
T ss_dssp BCTTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTTS---------GGGCEEEETTCEEEE--EEEESSSCBCE
T ss_pred cccCCceeecccccccccchhhH-hhcCCCCEEEECCeeccCC---------CCcceEcCCCCEEEE--EecCCCCccce
Confidence 21 1110 00000 0124578999999987442 137899999997765 56665555554
Q ss_pred -EEeCCeeEEEeecCCceeee--eeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCC
Q 007735 240 -RIQNHNLLLAETEGSYTVQQ--NYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSK 315 (591)
Q Consensus 240 -~i~gh~~~via~DG~~~~p~--~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (591)
.|+||.|+|++ ||.+++|. .++++.|++|||+||+|++++ +| +|+++++...... .....|+++|.+..
T Consensus 249 ~~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~-pG-~y~~~~h~~~~~~----~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 249 HLIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PG-VYAYLNHNLIEAF----ELGAAGHIKVEGKW 320 (336)
T ss_dssp EETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHHH----TTSCEEEEEEESCC
T ss_pred EEECCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC-Cc-eEEEEechhhccc----cCCCeEEEEECCCC
Confidence 46999999998 99998864 468999999999999999996 68 9999998753210 13467899998654
No 30
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=7.9e-44 Score=366.14 Aligned_cols=241 Identities=16% Similarity=0.206 Sum_probs=197.9
Q ss_pred cccCCceEEEEEEEEEEEecCCCe-eeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC
Q 007735 21 CSAADLFVYFDFEVSYITASPLGV-PQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL 99 (591)
Q Consensus 21 ~~~~~~~~~~~~~v~~~~~~~dG~-~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~ 99 (591)
+.+...++++++.++ ..++|. ...++..||++|||+||+++||+|+|+|+|+|+++++|||||+++. +.+||++
T Consensus 7 ~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~--~~~dG~~ 81 (313)
T 3tas_A 7 APAGGEVKRIKLYAE---RLGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYE--ISSDGTK 81 (313)
T ss_dssp CCCCCCEEEEEEEEE---ECGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCST
T ss_pred CCCCceEEEEEEEEE---EcCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCC--ccCCCCc
Confidence 445567788888764 356764 4566778999999999999999999999999999999999999875 5799999
Q ss_pred CCCCccCCCCcEEEEEEeC------------CceeeeEEecChh------hhhhcCceeeEEEecCCCCCCCCCCCCCcc
Q 007735 100 GTNCPIPPKWNWTYQFQVK------------DQVGSFFYFPSLH------FQRASGGFGGFIINNRAIIPIPFDTPDGDI 161 (591)
Q Consensus 100 ~tq~~I~PG~~~~Y~f~~~------------~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~ 161 (591)
.+||+|.||++|+|+|++. +++||||||||.. .|+.+||+|+|||+++... .+|+|+
T Consensus 82 ~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d~e~ 156 (313)
T 3tas_A 82 QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDRTH 156 (313)
T ss_dssp TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCSEEE
T ss_pred cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----cccccc
Confidence 9999999999999999863 3689999999964 4588999999999997652 348999
Q ss_pred eEEecccccCchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEE
Q 007735 162 TILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRI 241 (591)
Q Consensus 162 ~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i 241 (591)
+|+++||+ +||+... ..+.++++.|++|||||+|++.. .+.|+|
T Consensus 157 ~l~~~d~t------------------------~Ng~~~~-----------~~~~l~v~~Ge~vr~~liN~g~~-~hpfHl 200 (313)
T 3tas_A 157 TIVFNDMT------------------------INNRPAH-----------TGPDFEATVGDRVEFVMITHGEY-YHTFHL 200 (313)
T ss_dssp EEEEETTE------------------------ETTCCTT-----------CCCCEEEETTCEEEEEEEEESSC-CEEEEE
T ss_pred eeeccchh------------------------cccCCcc-----------cccccccccCCEEEEEEeccccc-ceeeee
Confidence 99999984 4665542 24789999999999999999965 899999
Q ss_pred eCCeeEEEeecCCcee---eeeeeEEEEccccEEEEEEEeCC--CCCcceEEEEeecccccccCCCcceEEEEEecC
Q 007735 242 QNHNLLLAETEGSYTV---QQNYTSLDIHVGQSYSFLVTMDQ--NASTDYYIVASARFVNESQWKRVTGVAILHYTN 313 (591)
Q Consensus 242 ~gh~~~via~DG~~~~---p~~~d~v~i~pGqR~dvlv~~~~--~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~ 313 (591)
+||.|++++.||.... +..+|++.|.||||++++|.+.+ .+| .|.++++...... ....+++.+..
T Consensus 201 HGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG-~w~~HCHi~~H~~-----~GM~~~f~V~~ 271 (313)
T 3tas_A 201 HGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAG-AWMYHCHVQSHSD-----MGMVGLFLVKK 271 (313)
T ss_dssp TTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEECSHHHHH-----TTCEEEEEEEC
T ss_pred cCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCE-eEEEEeCChHHHH-----CCCeEEEEEEC
Confidence 9999999999987653 67889999999999999998864 367 8999988643221 23446666654
No 31
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=1.1e-43 Score=362.44 Aligned_cols=243 Identities=16% Similarity=0.226 Sum_probs=195.9
Q ss_pred hcccCCceEEEEEEEEEEEecCCC-eeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCC
Q 007735 20 LCSAADLFVYFDFEVSYITASPLG-VPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGL 98 (591)
Q Consensus 20 ~~~~~~~~~~~~~~v~~~~~~~dG-~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv 98 (591)
..++...+++|++.++... +| ....++.+||++|||+||+++||+|+|+|+|+|++++||||||+++. +++||+
T Consensus 22 p~~~~~~~~~~~~~a~~~~---~~~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~--~~~DG~ 96 (299)
T 3t9w_A 22 PVRAQGTTRRITMYAEKIS---DELYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYD--VNSDGT 96 (299)
T ss_dssp -----CCEEEEEEEEEEEE---TTEEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCC
T ss_pred CcccCCCEEEEEEEEEecC---CCceeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccC--CccCCC
Confidence 4566778899999987644 43 33455667999999999999999999999999999999999999775 679999
Q ss_pred CCCCCccCCCCcEEEEEEeC------------CceeeeEEecChh------hhhhcCceeeEEEecCCCCCCCCCCCCCc
Q 007735 99 LGTNCPIPPKWNWTYQFQVK------------DQVGSFFYFPSLH------FQRASGGFGGFIINNRAIIPIPFDTPDGD 160 (591)
Q Consensus 99 ~~tq~~I~PG~~~~Y~f~~~------------~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~p~~~~d~e 160 (591)
+.+||+|+||++|+|+|+++ +++||||||||.. .|+.+||+|+|||+++... .+|+|
T Consensus 97 ~~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~-----~~d~e 171 (299)
T 3t9w_A 97 LMNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL-----LPKRQ 171 (299)
T ss_dssp TTTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEE
T ss_pred ccccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc-----Ccccc
Confidence 88999999999999999985 2689999999963 4789999999999987642 34899
Q ss_pred ceEEecccccCchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEE
Q 007735 161 ITILIGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFR 240 (591)
Q Consensus 161 ~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~ 240 (591)
+++++++|+ +||+.. .+.+.++++.||+|||||+|++.. .+.|+
T Consensus 172 ~~l~~~~~~------------------------~Ng~~~-----------~~~p~l~v~~Ge~Vr~~liN~~~~-~HpfH 215 (299)
T 3t9w_A 172 FTVVFNDMM------------------------INNRAH-----------HDAPTFEANLGERVEWIAIGHGSN-FHTFH 215 (299)
T ss_dssp EEEEEETTE------------------------ETTCCT-----------TCCCEEEEETTCEEEEEEEEESSC-CCEEE
T ss_pred ceeeeeeee------------------------ecCccc-----------cccccceecCCCEEEEEEEecccc-ceeee
Confidence 999998774 677765 235889999999999999999975 68999
Q ss_pred EeCCeeEEEeecCCcee---eeeeeEEEEccccEEEEEEEeCC--CCCcceEEEEeecccccccCCCcceEEEEEecCC
Q 007735 241 IQNHNLLLAETEGSYTV---QQNYTSLDIHVGQSYSFLVTMDQ--NASTDYYIVASARFVNESQWKRVTGVAILHYTNS 314 (591)
Q Consensus 241 i~gh~~~via~DG~~~~---p~~~d~v~i~pGqR~dvlv~~~~--~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~ 314 (591)
|+||.|+++..|+.... +...|++.|.||||++++|.+.+ .+| .|.++++...-.+ ....+++.+...
T Consensus 216 lHGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG-~w~~HCHi~~H~~-----~GM~~~f~V~~~ 288 (299)
T 3t9w_A 216 LHGHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPG-MWMYHCHVQNHSD-----MGMAGMFLVRNA 288 (299)
T ss_dssp ETTCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSE-EEEEEECSHHHHH-----TTCEEEEEEECT
T ss_pred EecceEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCe-eEEEEcCCHHHHh-----cCCeEEEEEECC
Confidence 99999999998887654 34689999999999999998664 367 8999988653221 223456665543
No 32
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=7.6e-44 Score=371.42 Aligned_cols=268 Identities=17% Similarity=0.168 Sum_probs=206.0
Q ss_pred ccCCceEEEEEEEEEEEec--CCCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC
Q 007735 22 SAADLFVYFDFEVSYITAS--PLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL 99 (591)
Q Consensus 22 ~~~~~~~~~~~~v~~~~~~--~dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~ 99 (591)
.+.+.+++|+|++++...+ +||..+.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++.+....||..
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~ 109 (340)
T 2bw4_A 33 KTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGG 109 (340)
T ss_dssp SSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGG
T ss_pred cCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCc
Confidence 4566789999999998876 569999999999999999999999999999999998 78999999876544344433
Q ss_pred C-CCCccCCCCcEEEEEEeCCceeeeEEecChh----hhhhcCceeeEEEecCCCCC----CCCCCCCCcceEEeccccc
Q 007735 100 G-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH----FQRASGGFGGFIINNRAIIP----IPFDTPDGDITILIGDWYT 170 (591)
Q Consensus 100 ~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~----~p~~~~d~e~~l~l~d~~~ 170 (591)
. + .|.||++++|+|++ +++||||||||.. .|+.+||+|+|||++++..+ .|. .+|+|++|+++||++
T Consensus 110 ~~~--~i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~ 185 (340)
T 2bw4_A 110 ALT--QVNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYV 185 (340)
T ss_dssp GGC--CBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECC
T ss_pred cce--EeCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeee
Confidence 3 5 49999999999999 5899999999964 79999999999999865321 222 458999999999998
Q ss_pred C--chHHH----------HHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEE
Q 007735 171 R--NHTAL----------RKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLN 238 (591)
Q Consensus 171 ~--~~~~~----------~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~ 238 (591)
. ..+.+ ....+. .....++.++|||+.+.. ...+.+++++||+|||++.|.+.. .+.
T Consensus 186 ~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~---------~~~~~l~v~~G~r~Rl~n~~~~~~-~~~ 254 (340)
T 2bw4_A 186 PKDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGAL---------TGDHALTAAVGERVLVVHSQANRD-TRP 254 (340)
T ss_dssp CBCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTT---------SGGGCEEEETTCEEEEEEEESSSC-BCE
T ss_pred ccccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCc---------cCCCceEcCCCCEEEEEECCCCCc-cce
Confidence 3 21111 000000 012357899999998621 114889999999888776665433 223
Q ss_pred EEEeCCeeEEEeecCCceee--eeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecc-cccccCCCcceEEEEEecCCC
Q 007735 239 FRIQNHNLLLAETEGSYTVQ--QNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF-VNESQWKRVTGVAILHYTNSK 315 (591)
Q Consensus 239 ~~i~gh~~~via~DG~~~~p--~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~-~~~~~~~~~~~~ail~y~~~~ 315 (591)
.++++|.|+|++ ||.++++ ..++++.|+||||+||+|++++ +| +|+++++... ... ....++++|.+..
T Consensus 255 ~~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~-pG-~y~~~~h~~~~h~~-----~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 255 HLIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PG-VYAYVNHNLIEAFE-----LGAAGHFKVTGEW 326 (340)
T ss_dssp EEETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHHHT-----TSCEEEEEEESCC
T ss_pred EEecCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC-Ce-eeEEEcCchHHHHh-----CCCEEEEEECCCC
Confidence 358999999997 9998864 3579999999999999999997 68 9999998752 211 2356889998654
No 33
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=4.5e-40 Score=341.79 Aligned_cols=238 Identities=17% Similarity=0.233 Sum_probs=194.0
Q ss_pred CCceEEEEEEEEEEEecCCCeeeE-EEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCC
Q 007735 24 ADLFVYFDFEVSYITASPLGVPQQ-VIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN 102 (591)
Q Consensus 24 ~~~~~~~~~~v~~~~~~~dG~~~~-~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq 102 (591)
...+++|+|++++. ++|.... .+.+||++|||+|+|++||+|+|+|+|.++++++|||||++++ .++||++.+|
T Consensus 45 ~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~~t~ 119 (343)
T 3cg8_A 45 GGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTAMNK 119 (343)
T ss_dssp CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTT
T ss_pred CCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCccccc
Confidence 34679999999874 4553221 2235899999999999999999999999999999999999876 6899999889
Q ss_pred CccCCCCcEEEEEEeCC------------ceeeeEEecCh------hhhhhcCceeeEEEecCCCCCCCCCCCCCcceEE
Q 007735 103 CPIPPKWNWTYQFQVKD------------QVGSFFYFPSL------HFQRASGGFGGFIINNRAIIPIPFDTPDGDITIL 164 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~~------------~~Gt~wYH~H~------~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~ 164 (591)
|+|.||++|+|+|++.+ ++||||||||. ..|+.+||+|+|||+++... .+|+|++|+
T Consensus 120 ~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~-----~pd~e~~l~ 194 (343)
T 3cg8_A 120 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTIV 194 (343)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEEE
T ss_pred ccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC-----CCCceEEEE
Confidence 99999999999999842 35999999996 47999999999999987542 247899999
Q ss_pred ecccccCchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCC
Q 007735 165 IGDWYTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNH 244 (591)
Q Consensus 165 l~d~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh 244 (591)
++|| +|||+..+ +.+.+++++||+|||||+|.+.. .|.||||||
T Consensus 195 ~~d~------------------------~iNG~~~~-----------~~~~l~v~~Ge~vri~l~N~g~~-~HpfHlHGh 238 (343)
T 3cg8_A 195 FNDM------------------------TINNRKPH-----------TGPDFEATVGDRVEIVMITHGEY-YHTFHMHGH 238 (343)
T ss_dssp EETT------------------------EETTCCTT-----------CCCCEEEETTCEEEEEEEEESSC-CEEEEETTC
T ss_pred cccc------------------------eecccCCC-----------CCccEEeCCCCEEEEEEEcCCcc-ccccEecCc
Confidence 9876 78998752 24789999999999999999974 899999999
Q ss_pred eeEEEeecCCcee----eeeeeEEEEccccEEEEEEEeC--CCCCcceEEEEeecccccccCCCcceEEEEEecCC
Q 007735 245 NLLLAETEGSYTV----QQNYTSLDIHVGQSYSFLVTMD--QNASTDYYIVASARFVNESQWKRVTGVAILHYTNS 314 (591)
Q Consensus 245 ~~~via~DG~~~~----p~~~d~v~i~pGqR~dvlv~~~--~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~ 314 (591)
.|++++ ||.+.. +...|++.|.|||+++++++++ +.+| .|.++++...... ....+++.+...
T Consensus 239 ~f~v~~-~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG-~w~~HCHi~~H~~-----~GM~g~~~V~~~ 307 (343)
T 3cg8_A 239 RWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAG-AWMYHCHVQSHSD-----MGMVGLFLVKKP 307 (343)
T ss_dssp CEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEECSHHHHH-----TTCEEEEEEECT
T ss_pred EEEEec-cCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCe-eEEEeCCCHHHHh-----ccCcEEEEEecC
Confidence 999874 676543 3567999999999999999984 3568 8999988643221 234566777644
No 34
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=2.8e-40 Score=372.43 Aligned_cols=221 Identities=14% Similarity=0.212 Sum_probs=169.0
Q ss_pred CCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC-C--------CCccCCCCcEEEEEEeCCc--
Q 007735 52 NGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-T--------NCPIPPKWNWTYQFQVKDQ-- 120 (591)
Q Consensus 52 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-t--------q~~I~PG~~~~Y~f~~~~~-- 120 (591)
|+++|||+|+|++||+|+|+|+|.|+++++|||||+++. +++||+++ + ||+|+||++|+|+|+++++
T Consensus 63 ~~~~pGP~I~~~~Gd~v~v~~~N~l~~~~siH~HGl~~~--~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~g 140 (647)
T 1sdd_B 63 HLGILGPVIRAEVDDVIQVRFKNLASRPYSLHAHGLSYE--KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSG 140 (647)
T ss_dssp GGTTSCCCEEEETTCEEEEEECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTS
T ss_pred ccCCcCceEEEeCCCEEEEEEEECCCCceEEecCcceeC--CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccC
Confidence 447999999999999999999999999999999999885 57999997 6 8999999999999999754
Q ss_pred ---ee----eeEEecChh--hhhhcCceeeEEEecCCCCCC--CCCCCCCcceEEec------ccccCchHHHHHHhhcC
Q 007735 121 ---VG----SFFYFPSLH--FQRASGGFGGFIINNRAIIPI--PFDTPDGDITILIG------DWYTRNHTALRKTLDAG 183 (591)
Q Consensus 121 ---~G----t~wYH~H~~--~q~~~Gl~G~liV~~~~~~~~--p~~~~d~e~~l~l~------d~~~~~~~~~~~~~~~~ 183 (591)
+| |||||||.+ .|+.+||+|+|||+++..... ..+..++|++|+++ ||+++............
T Consensus 141 p~~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~ 220 (647)
T 1sdd_B 141 PENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASS 220 (647)
T ss_dssp CCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC------------
T ss_pred CCCCCCCceEEEEccCCCCcccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCCc
Confidence 57 999999984 799999999999999764321 11234689999999 78887443211000011
Q ss_pred CCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcc-eEEEEEeCCeeEEEeecCCceeeeeee
Q 007735 184 KGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIST-SLNFRIQNHNLLLAETEGSYTVQQNYT 262 (591)
Q Consensus 184 ~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~~~p~~~d 262 (591)
.....++.++|||+.+ +.|.+++++|++|||||+|++... .|.||+|||.|++++.||. .+|
T Consensus 221 ~~~~~~~~~~iNG~~~------------~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~~-----~~d 283 (647)
T 1sdd_B 221 EVKNSHEFHAINGMIY------------NLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQH-----QLG 283 (647)
T ss_dssp ---CCCEEEEETTBSS------------CCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSCE-----EES
T ss_pred chhhcCceeccCCEec------------CCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCCc-----ccc
Confidence 1123478999999985 137899999999999999999864 8999999999999999863 689
Q ss_pred EEEEccccEEEEEEEeCCCCCcceEEEEeec
Q 007735 263 SLDIHVGQSYSFLVTMDQNASTDYYIVASAR 293 (591)
Q Consensus 263 ~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~ 293 (591)
++.|+||||+||+|++++ +| .|.++++..
T Consensus 284 ~v~l~pg~r~~v~~~~~~-pG-~w~~hch~~ 312 (647)
T 1sdd_B 284 VWPLLPGSFKTLEMKASK-PG-WWLLDTEVG 312 (647)
T ss_dssp SEEECTTEEEEEEEECCS-SE-EEEEECCCH
T ss_pred eEEECCCeEEEEEEEecc-ce-EeecccCcc
Confidence 999999999999999996 57 898888764
No 35
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.7e-41 Score=347.82 Aligned_cols=215 Identities=14% Similarity=0.197 Sum_probs=159.7
Q ss_pred eEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccC----CCCCCCCCCCC---CCCccCCCCcEEEEEEeC
Q 007735 46 QQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQ----RRSSWQDGLLG---TNCPIPPKWNWTYQFQVK 118 (591)
Q Consensus 46 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~----~~~~~~DGv~~---tq~~I~PG~~~~Y~f~~~ 118 (591)
++.+++| ++|||+|+|++||+|+|+|+|.|+++++|||||++. .+.+++||+++ .||+|+||++|+|+|+++
T Consensus 49 ~~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~ 127 (306)
T 1sdd_A 49 KPQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIIS 127 (306)
T ss_dssp CCCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECC
T ss_pred ccccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEeC
Confidence 3446689 689999999999999999999999999999999984 33444444442 279999999999999996
Q ss_pred Cc---------eeeeEEecChhh--hhhcCceeeEEEecCCCC---CCCCCCCCCcceEEecccccCchHHHHHHhhcCC
Q 007735 119 DQ---------VGSFFYFPSLHF--QRASGGFGGFIINNRAII---PIPFDTPDGDITILIGDWYTRNHTALRKTLDAGK 184 (591)
Q Consensus 119 ~~---------~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~---~~p~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~ 184 (591)
++ +||||||||.+. |+.+||+|+|||+++... ..+. ..|+|++|+++||.... +.
T Consensus 128 ~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~-~~d~e~~l~~~d~d~~~--------~~-- 196 (306)
T 1sdd_A 128 EHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQK-MFEKQHVLMFAVFDESK--------SW-- 196 (306)
T ss_dssp GGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBS-SSCCCCCCBCCEEETTS--------SS--
T ss_pred CccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcC-cccceEEEEEEeccccc--------cc--
Confidence 43 479999999765 889999999999987532 1222 45889999999984321 00
Q ss_pred CCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCc-ceEEEEEeCCeeEEEeecCCceeeeeeeE
Q 007735 185 GLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQQNYTS 263 (591)
Q Consensus 185 ~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~ 263 (591)
....++.++|||+.+ +..|.+++++|++|||||+|+|.. ..+.|+|+||.|++ ||. .+|+
T Consensus 197 ~~~~~~~~~ING~~~-----------~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG~-----~~dt 257 (306)
T 1sdd_A 197 NQTSSLMYTVNGYVN-----------GTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NHH-----KISA 257 (306)
T ss_dssp SCCCCEEECSSSCCS-----------SCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TTE-----ECSC
T ss_pred ccCCCcceeeCCEec-----------CCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CCE-----Ecce
Confidence 112467899999986 224789999999999999999986 56789999999985 873 4899
Q ss_pred EEEccccEEEEEEEeCCCCCcceEEEEeec
Q 007735 264 LDIHVGQSYSFLVTMDQNASTDYYIVASAR 293 (591)
Q Consensus 264 v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~ 293 (591)
+.|.||||+||++++++ +| .|+++++..
T Consensus 258 v~l~pger~~v~~~~~~-pG-~~~~hch~~ 285 (306)
T 1sdd_A 258 ITLVSATSTTANMTVSP-EG-RWTIASLIP 285 (306)
T ss_dssp CCEETTCCBC---------C-CCCCBCCST
T ss_pred EEECCCcEEEEEEEcCC-Ce-EEEEEeCCh
Confidence 99999999999999985 67 898888754
No 36
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=2.3e-38 Score=342.37 Aligned_cols=257 Identities=19% Similarity=0.230 Sum_probs=210.4
Q ss_pred ceEEEEEEEEEEEecC-CCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC--CCceeeecCccCCCCCCCCCCCC-C
Q 007735 26 LFVYFDFEVSYITASP-LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD--ESLLIHWSGIQQRRSSWQDGLLG-T 101 (591)
Q Consensus 26 ~~~~~~~~v~~~~~~~-dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~--~~~siH~HG~~~~~~~~~DGv~~-t 101 (591)
.++.|++++++..... +|....+|+|||++|||+|++++||+++++|+|.++ ..++|||||+. .+||++. +
T Consensus 162 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~-----~~DG~~~~~ 236 (447)
T 2dv6_A 162 KTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT-----GPGGAAAFT 236 (447)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGGGGC
T ss_pred cEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeecccc-----CCCCCCccE
Confidence 4568888887766655 688999999999999999999999999999999986 57899999984 3799886 4
Q ss_pred CCccCCCCcEEEEEEeCCceeeeEEecCh---hhhhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchH----
Q 007735 102 NCPIPPKWNWTYQFQVKDQVGSFFYFPSL---HFQRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHT---- 174 (591)
Q Consensus 102 q~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~---- 174 (591)
.|.||++++|.|++ +++||||||||. ..|+.+||+|+|+|+++.. .| .+|+|++++++||++....
T Consensus 237 --~i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~--~P--~~d~~~~~~~~~~~~~~~~~~~g 309 (447)
T 2dv6_A 237 --QTDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG--LP--QVDREFYVMQGEIYTVKSFGTSG 309 (447)
T ss_dssp --CBCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC--SC--CCSEEEEEEEEEECBSSCTTCCE
T ss_pred --EeCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC--CC--CCCeeEEEEecccccCCcccccc
Confidence 39999999999999 589999999996 3789999999999998643 22 4588999999999975321
Q ss_pred ----HHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEe
Q 007735 175 ----ALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAE 250 (591)
Q Consensus 175 ----~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via 250 (591)
.+.... ...++.++|||+.+.++ ..+.+++++|++|||||+|++....|.|||+||+|+||+
T Consensus 310 ~~~~~~~~~~-----~~~~~~~~iNG~~~~~~---------~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~ 375 (447)
T 2dv6_A 310 EQEMDYEKLI-----NEKPEYFLFNGSVGSLT---------RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVY 375 (447)
T ss_dssp ECCBBHHHHH-----TTCCSEEEETTSTTCCC---------CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEEC
T ss_pred cccCChHHhh-----ccCCCEEEECCcccCCC---------CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEE
Confidence 011111 12468999999987432 125799999999999999999888999999999999999
Q ss_pred ecCCceeee--eeeEEEEccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCC
Q 007735 251 TEGSYTVQQ--NYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSK 315 (591)
Q Consensus 251 ~DG~~~~p~--~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 315 (591)
.||.++++. ..|++.|.||||++|+|++++ +| .|+++++...... ....++++|.+..
T Consensus 376 ~dG~~~~~p~~~~dtv~l~pg~r~~i~~~~~~-pG-~~~~hch~~~h~~-----~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 376 SLGSVVSPPLIGVQTVSVPPGGATIVDFKIDR-AG-RYILVDHALSRLE-----HGLVGFLNVDGPK 435 (447)
T ss_dssp GGGCSSSCCEEEESEEEECTTEEEEEEEECCS-CE-EEEEEESSGGGGG-----GTCCEEEEECSCS
T ss_pred cCCcccCCCcccccEEEECCCcEEEEEEECCC-CE-EEEEEecCcCccc-----cCCEEEEEEeCCC
Confidence 999998754 589999999999999999996 68 9999998764322 3346899997653
No 37
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=2.4e-40 Score=375.29 Aligned_cols=249 Identities=12% Similarity=0.105 Sum_probs=196.2
Q ss_pred CCceEEEEEEEEEEE--ecCCCe---------------eeEE-E-E-----ECC-----------CCCCCcEEeeCCCEE
Q 007735 24 ADLFVYFDFEVSYIT--ASPLGV---------------PQQV-I-A-----ING-----------KFPGPTINVTTNNNV 68 (591)
Q Consensus 24 ~~~~~~~~~~v~~~~--~~~dG~---------------~~~~-~-~-----~Ng-----------~~pgP~i~v~~Gd~v 68 (591)
...+|+|.+.+++.. .+|+|. -+++ + . |++ ++|||+|||++||+|
T Consensus 130 ~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~v 209 (770)
T 2r7e_B 130 QKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDNI 209 (770)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSCE
T ss_pred CCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCEE
Confidence 456899999999876 467653 1222 2 2 233 589999999999999
Q ss_pred EEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCC---------ceeeeEEecChhh--hhhcC
Q 007735 69 VVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKD---------QVGSFFYFPSLHF--QRASG 137 (591)
Q Consensus 69 ~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~---------~~Gt~wYH~H~~~--q~~~G 137 (591)
+|+|+|.|+++++|||||+++..... ||++++||+|+||++|+|+|++++ ++||||||||.+. |+.+|
T Consensus 210 ~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~G 288 (770)
T 2r7e_B 210 MVTFRNQASRPYSFYSSLISYEEDQR-QGAEPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSG 288 (770)
T ss_dssp EEEEECCSSSCCCCCBTTCCCCCCSS-SCTTTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHTS
T ss_pred EEEEEECCCCCcceeecccccccccC-CCCcCccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhCC
Confidence 99999999999999999999987653 699999999999999999999975 8999999999875 89999
Q ss_pred ceeeEEEecCCCCCC--CCCCCCCcceEEecc------cccCchHHHHHHhhcCC--------CCCCCceEEEcCcCCCC
Q 007735 138 GFGGFIINNRAIIPI--PFDTPDGDITILIGD------WYTRNHTALRKTLDAGK--------GLGMPDGVLINGKGPYQ 201 (591)
Q Consensus 138 l~G~liV~~~~~~~~--p~~~~d~e~~l~l~d------~~~~~~~~~~~~~~~~~--------~~~~~~~~lING~~~~~ 201 (591)
|+|+|||+++..... ....+++|++|++++ ||++... ..+..... .....+.++|||+..
T Consensus 289 L~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~--~~~~~~p~~~~~~d~~~~~~~~~~~ING~~~-- 364 (770)
T 2r7e_B 289 LIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENM--ERNCRAPCNIQMEDPTFKENYRFHAINGYIM-- 364 (770)
T ss_dssp CCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGG--SSCSCCSSCCCSSSSSSTTTSCEECTTSCTT--
T ss_pred ceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccch--hhcccCccccccCCccccccCCccccCCccC--
Confidence 999999999764321 112457899888743 6664221 11110000 011245689999975
Q ss_pred CCCccCCCCCcceeEEEecCCEEEEEEeEeCCc-ceEEEEEeCCeeEEEeecCCceeeeeeeEEEEccccEEEEEEEeCC
Q 007735 202 YNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQ 280 (591)
Q Consensus 202 ~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~ 280 (591)
+..+.+++++|++|||||+|+|.. ..|.||||||.|+|++.||. .+|++.|.||||++|+|++++
T Consensus 365 ---------~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad~ 430 (770)
T 2r7e_B 365 ---------DTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPSK 430 (770)
T ss_dssp ---------TTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCSS
T ss_pred ---------CCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeCC
Confidence 234789999999999999999875 47999999999999999974 689999999999999999995
Q ss_pred CCCcceEEEEeec
Q 007735 281 NASTDYYIVASAR 293 (591)
Q Consensus 281 ~~g~~y~i~~~~~ 293 (591)
+| .|.++++..
T Consensus 431 -pG-~w~~hcH~~ 441 (770)
T 2r7e_B 431 -AG-IWRVECLIG 441 (770)
T ss_dssp -CB-CCCBCCCSH
T ss_pred -CC-ceEEEeccc
Confidence 57 888888764
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.9e-36 Score=342.92 Aligned_cols=215 Identities=15% Similarity=0.180 Sum_probs=168.6
Q ss_pred CCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCC-----CCC-CCCccCCCCcEEEEEEeCCcee-----
Q 007735 54 KFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDG-----LLG-TNCPIPPKWNWTYQFQVKDQVG----- 122 (591)
Q Consensus 54 ~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG-----v~~-tq~~I~PG~~~~Y~f~~~~~~G----- 122 (591)
.+|||+||+++||+|+|+|+|.|+++++|||||+++. ++|+|| ++. +||+|.||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5799999999999999999999999999999999874 567765 555 7999999999999999976554
Q ss_pred ----eeEEecChh--hhhhcCceeeEEEecCCCCC-CC-CCCCCCcceEEec------ccccCchHHHHHHhhcCCCC--
Q 007735 123 ----SFFYFPSLH--FQRASGGFGGFIINNRAIIP-IP-FDTPDGDITILIG------DWYTRNHTALRKTLDAGKGL-- 186 (591)
Q Consensus 123 ----t~wYH~H~~--~q~~~Gl~G~liV~~~~~~~-~p-~~~~d~e~~l~l~------d~~~~~~~~~~~~~~~~~~~-- 186 (591)
|||||||.. .|+++||+|+|||+++.... .+ ....|+|++|+++ +||++. .+..+.......
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~--~~~~~~~~p~~v~~ 604 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTE--NIQRFLPNPAGVQL 604 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHH--HHHHHSSSSSCSCC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeecccccccccccc--chhhcccCchhccc
Confidence 999999986 47899999999999875321 11 1245899999995 465532 222221110000
Q ss_pred C------CCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCc-ceEEEEEeCCeeEEEeecCCceeee
Q 007735 187 G------MPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQQ 259 (591)
Q Consensus 187 ~------~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~ 259 (591)
. ....++|||+.+ +..+ +.+++||+|||||+|+|.. ..|.|||+||+|+|+ +.
T Consensus 605 ~~~~~~~~~~~~~ING~~~-----------~~~~-l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~ 664 (742)
T 2r7e_A 605 EDPEFQASNIMHSINGYVF-----------DSLQ-LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MV 664 (742)
T ss_dssp CCHHHHGGGCCBCTTTTCS-----------SCCC-CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SS
T ss_pred ccccccccCceeeecCcCC-----------CCCc-EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------cc
Confidence 0 013579999985 1224 8999999999999998764 468999999999986 46
Q ss_pred eeeEEEEccccEEEEEEEeCCCCCcceEEEEeec
Q 007735 260 NYTSLDIHVGQSYSFLVTMDQNASTDYYIVASAR 293 (591)
Q Consensus 260 ~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~ 293 (591)
.+|++.|.||||++|+|++++ +| .|.++++..
T Consensus 665 ~~Dtv~l~Pg~~~~v~~~ad~-pG-~w~~hcH~~ 696 (742)
T 2r7e_A 665 YEDTLTLFPFSGETVFMSMEN-PG-LWILGCHNS 696 (742)
T ss_dssp SBCSSCCCCCSSEECCEECCC-CC-CSCCEECCC
T ss_pred ceeEEEECCCcEEEEEEEcCC-Ce-EEEEEeCCc
Confidence 789999999999999999995 58 899998865
No 39
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.95 E-value=1.2e-27 Score=248.24 Aligned_cols=225 Identities=13% Similarity=0.114 Sum_probs=154.0
Q ss_pred ceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeeeeeEEEEccccEEEEEEEeCCC-----------
Q 007735 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQN----------- 281 (591)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~----------- 281 (591)
.|+|++++|+++|+||+|.... .+.++.||..+. ++.||.++ +...|.|||+++..++++++
T Consensus 76 GP~I~v~~Gd~v~v~~~N~l~~-~~sih~HG~~~~-~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~ 148 (343)
T 3cg8_A 76 GPLIEVNEGDTLHIEFTNTMDV-RASLHVHGLDYE-ISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPG 148 (343)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEECC
T ss_pred CCEEEEECCCEEEEEEEECCCC-CeeEEecCcccC-CcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccccCCC
Confidence 4899999999999999999865 556888888776 68999874 23468999999999999764
Q ss_pred -CCcceEEEEeeccc----ccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccccccccccCCCCCCCC
Q 007735 282 -ASTDYYIVASARFV----NESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQ 356 (591)
Q Consensus 282 -~g~~y~i~~~~~~~----~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~~~~~p~p~ 356 (591)
+| .||.+.+.... .+ ....+.+.-|++..+..
T Consensus 149 ~~G-t~~YH~h~~~~~~~~~~-~~~Gl~G~~iV~~~~~~----------------------------------------- 185 (343)
T 3cg8_A 149 SAG-YWHYHDHVVGTEHGTGG-IRNGLYGPVIVRRKGDV----------------------------------------- 185 (343)
T ss_dssp SCE-EEEEECSSSSSTTCHHH-HHHTCEEEEEEECTTCC-----------------------------------------
T ss_pred Cce-EEEEecCccccccchhh-hhcCCeEEEEEecCCCC-----------------------------------------
Confidence 23 45455442110 00 00112222233221100
Q ss_pred CCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccC
Q 007735 357 GSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTY 436 (591)
Q Consensus 357 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~ 436 (591)
..++++.+... .|+|||+.|. . ...+.++.
T Consensus 186 --------~pd~e~~l~~~---------d~~iNG~~~~--~-------------------------------~~~l~v~~ 215 (343)
T 3cg8_A 186 --------LPDATHTIVFN---------DMTINNRKPH--T-------------------------------GPDFEATV 215 (343)
T ss_dssp --------CCSEEEEEEEE---------TTEETTCCTT--C-------------------------------CCCEEEET
T ss_pred --------CCCceEEEEcc---------cceecccCCC--C-------------------------------CccEEeCC
Confidence 01133333221 2689987642 1 12356788
Q ss_pred CcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEe---CCccceeee
Q 007735 437 RGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSL---DNVGIWNLR 513 (591)
Q Consensus 437 g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~a---dNpG~W~~H 513 (591)
|++|+|+|.|.+.+.||||||||.|+|++. |.+.. ....+.++||+.|+||+++.++|++ ||||.|+||
T Consensus 216 Ge~vri~l~N~g~~~HpfHlHGh~f~v~~~--G~~~~------p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~H 287 (343)
T 3cg8_A 216 GDRVEIVMITHGEYYHTFHMHGHRWADNRT--GILTG------PDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYH 287 (343)
T ss_dssp TCEEEEEEEEESSCCEEEEETTCCEESSSS--SSCCS------TTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEE
T ss_pred CCEEEEEEEcCCccccccEecCcEEEEecc--CcccC------CCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEe
Confidence 999999999998899999999999999743 32211 1123578999999999999999995 899999999
Q ss_pred cccccchhccceEEEEEecCCCCCCCCCCCCCCccccc
Q 007735 514 TENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCG 551 (591)
Q Consensus 514 CHil~H~~~GM~~~~~V~~p~~~~~~~~~~p~~~~~c~ 551 (591)
||+++|++.|||..++|.+++. .+|...+.|-
T Consensus 288 CHi~~H~~~GM~g~~~V~~~~~------~~P~y~~~~~ 319 (343)
T 3cg8_A 288 CHVQSHSDMGMVGLFLVKKPDG------TIPGYEPHEH 319 (343)
T ss_dssp ECSHHHHHTTCEEEEEEECTTS------CCSCC-----
T ss_pred CCCHHHHhccCcEEEEEecCCC------CCCCCCCCCc
Confidence 9999999999999999987653 2355555543
No 40
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.95 E-value=1.2e-27 Score=242.90 Aligned_cols=233 Identities=15% Similarity=0.139 Sum_probs=162.2
Q ss_pred CceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeeeeeEEEEcc
Q 007735 189 PDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHV 268 (591)
Q Consensus 189 ~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~p 268 (591)
...+++||+.. .|+|++++|+++++|+.|.... .+.+|+||.. ..+.||.+. .+...|.|
T Consensus 54 ~~~~~~ng~~p-------------gP~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~P 113 (288)
T 3gdc_A 54 FKGWSYNGRIP-------------GPTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAP 113 (288)
T ss_dssp EEEEEETTBSS-------------CCEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCT
T ss_pred EEEEEECCccC-------------CCcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECC
Confidence 35899999974 3899999999999999999765 6889999975 457899764 23456899
Q ss_pred ccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccccccccccccccccc
Q 007735 269 GQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSA 348 (591)
Q Consensus 269 GqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~ 348 (591)
|+++++.++++ .+| .||.+++......-....+ .+.+.+.... . .+.. +.++.+ .+..
T Consensus 114 G~~~~y~f~~~-~~G-t~~yH~H~~~~~~~~~~Gl--~G~liV~~~~-----~---~~~~--d~e~~l--------~~~d 171 (288)
T 3gdc_A 114 GQSFTYEFDAT-PFG-THLYHCHQSPLAPHIAKGL--YGGFIVEPKE-----G---RPPA--DDEMVM--------VMNG 171 (288)
T ss_dssp TCEEEEEEECC-SCE-EEEEECCCSSHHHHHHTTC--EEEEEEECSS-----C---CCCC--SEEEEE--------EEEE
T ss_pred CCEEEEEEEcC-CCc-cEEEEecCcchHHHHhCcC--eEEEEEeCCc-----c---CCCC--cceEEE--------EEee
Confidence 99999999996 678 9999987642100000112 2333332211 0 0110 111110 0000
Q ss_pred CCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcc
Q 007735 349 SGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRME 428 (591)
Q Consensus 349 ~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~ 428 (591)
+ ... .......|+|||+.|...
T Consensus 172 ---------------------~--~~~---~g~~~~~~~iNG~~~~~~-------------------------------- 193 (288)
T 3gdc_A 172 ---------------------Y--NTD---GGDDNEFYSVNGLPFHFM-------------------------------- 193 (288)
T ss_dssp ---------------------E--CCS---STTCCSEEEETTSTTHHH--------------------------------
T ss_pred ---------------------E--ecC---CCCCcceEEECccccccc--------------------------------
Confidence 0 000 001123689999876310
Q ss_pred eEEEeccCCcEEEEEEecCCC--cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCC
Q 007735 429 TSVINGTYRGFMEVILQNNDT--KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDN 506 (591)
Q Consensus 429 ~~v~~~~~g~~ve~vl~N~~~--~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adN 506 (591)
...+.++.|++|+|.|.|.+. ..|||||||+.|+|++.+.. +..|.++||+.|+||+++.|+|++++
T Consensus 194 ~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~-----------~~~~~~~Dtv~v~pg~~~~v~~~~~~ 262 (288)
T 3gdc_A 194 DFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTM-----------LTPSEYTDTISQVQGQRGILELRFPY 262 (288)
T ss_dssp HSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCC-----------SSCSEEESEEEEETTCEEEEEECCCS
T ss_pred CcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCc-----------cCCCceeeEEEeCCCceEEEEEECCC
Confidence 011356789999999999875 36999999999999874321 22368999999999999999999999
Q ss_pred ccceeeecccccchhccceEEEEEec
Q 007735 507 VGIWNLRTENLDSWYLGQETYVRVVN 532 (591)
Q Consensus 507 pG~W~~HCHil~H~~~GM~~~~~V~~ 532 (591)
||.|+||||+++|++.|||..++|.+
T Consensus 263 pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 263 PGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp CEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred CEEEEEEecChHHHhcCCCEEEEEeC
Confidence 99999999999999999999999864
No 41
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.94 E-value=5.7e-27 Score=243.37 Aligned_cols=246 Identities=17% Similarity=0.181 Sum_probs=162.8
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEee---cCCceeeeeeeEEEE
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAET---EGSYTVQQNYTSLDI 266 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~---DG~~~~p~~~d~v~i 266 (591)
..+++||+.. .|+|++++|+++|+||+|.... . .+||.|-+.+.+. ||.+. ++...|
T Consensus 24 ~~~~~NG~~p-------------GP~I~v~~Gd~v~v~v~N~l~~-~--~siH~HG~~~~~~~~~DGvp~----vtq~~I 83 (339)
T 2zwn_A 24 KVFGFNGQVP-------------GPLIHVQEGDDVIVNVTNNTSL-P--HTIHWHGVHQKGTWRSDGVPG----VTQQPI 83 (339)
T ss_dssp EEEEETTBSS-------------CCEEEEETTCEEEEEEEEESSS-C--BCCEEETCCCTTCGGGSCCBT----TTBCCB
T ss_pred EEEEECCccC-------------CCeEEEECCCEEEEEEEECCCC-C--ccEEeCCCCcCCCcccCCCCc----cccCcc
Confidence 5799999964 3999999999999999999865 3 3555555666664 99863 334579
Q ss_pred ccccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccccccccccccccc
Q 007735 267 HVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNV 346 (591)
Q Consensus 267 ~pGqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l 346 (591)
.|||||++.++++ .+| +||++++.....+.....+.+ +++... .. + .+++..... +....+.+ |..
T Consensus 84 ~PG~~~~y~f~~~-~~G-t~wyH~H~~~~~q~~~~Gl~G-~liV~p-~~-~--~~~~~~~d~--e~~l~l~d-----~~~ 149 (339)
T 2zwn_A 84 EAGDSYTYKFKAD-RIG-TLWYHCHVNVNEHVGVRGMWG-PLIVDP-KQ-P--LPIEKRVTK--DVIMMMST-----WES 149 (339)
T ss_dssp CTTCEEEEEEECC-SCE-EEEEECCSSHHHHTTTSCCEE-EEEEEC-SS-C--CTTGGGCSE--EEEEEEEE-----ECG
T ss_pred CCCCeEEEEEECC-CCE-EEEEEecCCchhhhhcCCceE-eEEecC-CC-c--ccccccCCc--eEEEEeeh-----eec
Confidence 9999999999997 578 999998764311110011222 233222 11 0 111110000 11111111 111
Q ss_pred ccCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCC
Q 007735 347 SASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPR 426 (591)
Q Consensus 347 ~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~ 426 (591)
... ..+...+ . .......|.|||+.+..
T Consensus 150 ~~~-~~~~~~g----------------~----~~~~~~~~~ING~~~~~------------------------------- 177 (339)
T 2zwn_A 150 AVA-DKYGEGG----------------T----PMNVADYFSVNAKSFPL------------------------------- 177 (339)
T ss_dssp GGT-TCTTCCC----------------S----TTSCCCEEEETTBCTTS-------------------------------
T ss_pred ccc-cccCCCC----------------C----CccccceEEEccccCCC-------------------------------
Confidence 000 0000000 0 00112368899976521
Q ss_pred cceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCC
Q 007735 427 METSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDN 506 (591)
Q Consensus 427 ~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adN 506 (591)
+..+.++.|++++|.|.|.+...||||||||+|+|++.+++. +.+|.++||+.|+||+++.|+|++||
T Consensus 178 --~~~~~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~DG~~----------~~~p~~~dtv~l~pg~r~~v~~~~~~ 245 (339)
T 2zwn_A 178 --TQPLRVKKGDVVKIRFFGAGGGIHAMHSHGHDMLVTHKDGLP----------LDSPYYADTVLVSPGERYDVIIEADN 245 (339)
T ss_dssp --SCCEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCS
T ss_pred --cccEEECCCCEEEEEEEeCCCceEEEEECCcEEEEEEeCCee----------cCCCcEEEEEEECCCCEEEEEEEeCC
Confidence 112456789999999999988899999999999999996432 22378899999999999999999999
Q ss_pred ccceeeecccccc------hhccceEEEEEecC
Q 007735 507 VGIWNLRTENLDS------WYLGQETYVRVVNP 533 (591)
Q Consensus 507 pG~W~~HCHil~H------~~~GM~~~~~V~~p 533 (591)
||.|+||||+++| ...||+..+++...
T Consensus 246 pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 246 PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp CSEEEEEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred CeeEEEEEechhhcccccccCCCcEEEEEECCC
Confidence 9999999999999 78999999988643
No 42
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.94 E-value=1.3e-26 Score=238.20 Aligned_cols=249 Identities=17% Similarity=0.179 Sum_probs=165.5
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEE-EeecCCceeeeeeeEEEEcc
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLL-AETEGSYTVQQNYTSLDIHV 268 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~p~~~d~v~i~p 268 (591)
..+++||+.. .|+|++++|+++++|+.|.... .+.+|+||....- .+.||.+. +....|.|
T Consensus 23 ~~~~~ng~~p-------------GP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~----~t~~~i~P 84 (318)
T 3g5w_A 23 HTFAFNGQVP-------------APLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPH----ATQHAIEP 84 (318)
T ss_dssp EEEEETTBSS-------------CCEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBT----TTBCCBCT
T ss_pred EEEEECCccC-------------CceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCcc----cccccCCC
Confidence 5899999874 3999999999999999998755 6788899876542 36799763 23357899
Q ss_pred ccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccccccccccccccccc
Q 007735 269 GQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSA 348 (591)
Q Consensus 269 GqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~ 348 (591)
|++++..++++ .+| .||.+++.....+.....+.+ +++. .... ..+++. .. +.+..+. .. .|....
T Consensus 85 G~~~~y~f~~~-~~G-t~wYH~H~~~~~~~~~~Gl~G-~lIV-~~~~---~~~~~~--~~--d~e~~l~-l~--dw~~~~ 150 (318)
T 3g5w_A 85 GDTFTYKFKAE-PAG-TMWYHCHVNVNEHVTMRGMWG-PLIV-EPKN---PLPIEK--TV--TKDYILM-LS--DWVSSW 150 (318)
T ss_dssp TCEEEEEEECC-SCE-EEEEECCSSHHHHHHHSCCEE-EEEE-ECSS---CCHHHH--TC--CEEEEEE-EE--EECGGG
T ss_pred CCEEEEEEEcC-CCE-EEEEEccCChhhhhccCCCEE-EEEE-cCCC---cccccc--cc--cceeEEE-EE--eecccc
Confidence 99999999997 568 999988764211100011222 2332 2211 000000 00 1111110 00 011100
Q ss_pred CCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcc
Q 007735 349 SGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRME 428 (591)
Q Consensus 349 ~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~ 428 (591)
.. .....+ . ..+....|.|||+.|..
T Consensus 151 ~~-~~~~~~-----------------~---~~~~~d~~~ING~~~~~--------------------------------- 176 (318)
T 3g5w_A 151 AN-KPGEGG-----------------I---PGDVFDYYTINAKSFPE--------------------------------- 176 (318)
T ss_dssp TT-CTTCCC-----------------C---TTCCCCEEEETTBCBTS---------------------------------
T ss_pred cc-ccccCC-----------------C---CCCcCcEEEEcCcCCCC---------------------------------
Confidence 00 000000 0 00112358999987521
Q ss_pred eEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCcc
Q 007735 429 TSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVG 508 (591)
Q Consensus 429 ~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG 508 (591)
+..+.++.|++|+|.|.|.+...||||||||.|+|++++++. +.+|.++||+.|.||+++.|+|++||||
T Consensus 177 ~~~l~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~dG~~----------~~~p~~~dtv~l~pger~~v~~~a~~pG 246 (318)
T 3g5w_A 177 TQPIRVKKGDVIRLRLIGAGDHVHAIHTHGHISQIAFKDGFP----------LDKPIKGDTVLIGPGERYDVILNMDNPG 246 (318)
T ss_dssp SCCEEECTTCEEEEEEEECSSSCEEEEETTSCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCSCS
T ss_pred CccEEeCCCCEEEEEEEeCCCceEEEEECCcEEEEEecCCcc----------cCCCccccEEEECCCCEEEEEEECCCCe
Confidence 012456789999999999988899999999999999986432 2247799999999999999999999999
Q ss_pred ceeeecccccchh------ccceEEEEEecCC
Q 007735 509 IWNLRTENLDSWY------LGQETYVRVVNPE 534 (591)
Q Consensus 509 ~W~~HCHil~H~~------~GM~~~~~V~~p~ 534 (591)
.|+||||+++|++ .|||..++|...+
T Consensus 247 ~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 247 LWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred eEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 9999999999998 5889999886543
No 43
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.93 E-value=8.1e-26 Score=227.97 Aligned_cols=215 Identities=13% Similarity=0.123 Sum_probs=153.3
Q ss_pred ceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeeeeeEEEEccccEEEEEEEeCCC-----------
Q 007735 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQN----------- 281 (591)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~----------- 281 (591)
-|+|+++.|+++++++.|... ....+|.||..+.- +.||..+ ..-.|.||+++...++++++
T Consensus 35 GP~i~~~~Gd~v~v~~~N~~~-~~~siH~HG~~~~~-~~DG~~~-----t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~ 107 (276)
T 3kw8_A 35 GPLIEVNEGDTLHIEFTNTMD-VRASLHVHGLDYEI-SSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPG 107 (276)
T ss_dssp CCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG-GGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEECC
T ss_pred CCeEEEECCCEEEEEEEECCC-CCccEeecCcccCC-ccCCCcC-----CcCCCCCCCEEEEEEEcCCccccccCccCCC
Confidence 499999999999999999864 47788999987654 6799762 23468999999999999763
Q ss_pred -CCcceEEEEeeccc----ccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccccccccccCCCCCCCC
Q 007735 282 -ASTDYYIVASARFV----NESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQ 356 (591)
Q Consensus 282 -~g~~y~i~~~~~~~----~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~~~~~p~p~ 356 (591)
+| .||.+.+.... .+. ...+.+.-|+. . .. .+
T Consensus 108 ~~g-t~~YH~h~~~~~~~~~~~-~~Gl~G~liV~-~-~~---------~~------------------------------ 144 (276)
T 3kw8_A 108 SAG-YWHYHDHVVGTEHGTGGI-RNGLYGPVIVR-R-KG---------DV------------------------------ 144 (276)
T ss_dssp SCE-EEEEECSSSSSTTCHHHH-HHTCEEEEEEE-C-TT---------CC------------------------------
T ss_pred CCE-EEEEecCccccccchhhh-hCccEEEEEEe-c-CC---------Cc------------------------------
Confidence 34 67777654321 000 00122211221 1 00 00
Q ss_pred CCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccC
Q 007735 357 GSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTY 436 (591)
Q Consensus 357 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~ 436 (591)
..++++.+.+. .|+|||+.|.. ...+.++.
T Consensus 145 --------~~drE~~l~l~---------~~~iNG~~~~~---------------------------------~p~i~v~~ 174 (276)
T 3kw8_A 145 --------LPDATHTIVFN---------DMTINNRKPHT---------------------------------GPDFEATV 174 (276)
T ss_dssp --------CCSEEEEEEEE---------TTEETTCCTTC---------------------------------CCCEEEET
T ss_pred --------ccccceEEEec---------ccccceecccC---------------------------------CCCEEEec
Confidence 01234443321 27899987631 12246788
Q ss_pred CcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeC---Cccceeee
Q 007735 437 RGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLD---NVGIWNLR 513 (591)
Q Consensus 437 g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~ad---NpG~W~~H 513 (591)
|++|+|+|.|.+.+.|||||||+.|+|++. |.+... ...+.+|||+.|.|+++..++|+++ |||.|+||
T Consensus 175 G~~vri~l~N~~~~~Hp~HlHG~~f~v~~~--G~~~~p------~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~H 246 (276)
T 3kw8_A 175 GDRVEIVMITHGEYYHTFHMHGHRWADNRT--GILTGP------DDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYH 246 (276)
T ss_dssp TCEEEEEEEEESSCCEEEEETTCCEESSSS--SSCCST------TCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEE
T ss_pred CCEEEEEEecCCCcceeEEEccceeEEecc--CccCCC------cccccCCccEEeCCCceEEEEEEeccCCCCCeEEEE
Confidence 999999999998899999999999999763 333211 1125689999999999999999997 89999999
Q ss_pred cccccchhccceEEEEEecCCC
Q 007735 514 TENLDSWYLGQETYVRVVNPEA 535 (591)
Q Consensus 514 CHil~H~~~GM~~~~~V~~p~~ 535 (591)
||+++|++.|||..++|.+++.
T Consensus 247 CH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 247 CHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp ECSHHHHHTTCEEEEEEECTTS
T ss_pred CCCchHhhCCCeEEEEEeCCCC
Confidence 9999999999999999998864
No 44
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.92 E-value=1.7e-25 Score=227.95 Aligned_cols=216 Identities=12% Similarity=0.125 Sum_probs=147.0
Q ss_pred ceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeeeeeEEEEccccEEEEEEEeCC------------
Q 007735 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQ------------ 280 (591)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~------------ 280 (591)
-|+|++++|++++++|.|.... ..+++.+|..+. -+.||.++. .-.|.|||.+...++++.
T Consensus 57 GP~i~~~~GD~v~v~~~N~l~~-~~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~ 129 (299)
T 3t9w_A 57 GPVLEMWEGDTLEIDLVNTTDR-VLSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWAEG 129 (299)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CceEEEECCeEEEEEEEECCCC-CccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCCCC
Confidence 4999999999999999998755 677888887654 367997642 124789999998888763
Q ss_pred CCCcceEEEEeecccccc---cCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccccccccccCCCCCCCCC
Q 007735 281 NASTDYYIVASARFVNES---QWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQG 357 (591)
Q Consensus 281 ~~g~~y~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~ 357 (591)
.+| .||.+.+....... ....+.+.-|++ . ..
T Consensus 130 ~~g-t~~YH~H~~~~~~~~~~~~~GL~G~liV~-~-~~------------------------------------------ 164 (299)
T 3t9w_A 130 TAG-YWHYHDHAMGTEHGTEGVLKGLYGALVVR-R-QG------------------------------------------ 164 (299)
T ss_dssp CCE-EEEEECSSSSSTTCHHHHHHTCEEEEEEE-C-TT------------------------------------------
T ss_pred Cce-eEEEecCCcccccchhhhcccccceEEEe-c-cc------------------------------------------
Confidence 234 56655543211000 000011111111 0 00
Q ss_pred CCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccCC
Q 007735 358 SFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYR 437 (591)
Q Consensus 358 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g 437 (591)
....++++.+.+. .|.+|+..+. + ...+.++.|
T Consensus 165 -----~~~~d~e~~l~~~---------~~~~Ng~~~~--~-------------------------------~p~l~v~~G 197 (299)
T 3t9w_A 165 -----DLLPKRQFTVVFN---------DMMINNRAHH--D-------------------------------APTFEANLG 197 (299)
T ss_dssp -----CCCCSEEEEEEEE---------TTEETTCCTT--C-------------------------------CCEEEEETT
T ss_pred -----ccCccccceeeee---------eeeecCcccc--c-------------------------------cccceecCC
Confidence 0112344544431 3678876542 1 123456789
Q ss_pred cEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEE---EEEEEeCCccceeeec
Q 007735 438 GFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWT---AILVSLDNVGIWNLRT 514 (591)
Q Consensus 438 ~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~---~irf~adNpG~W~~HC 514 (591)
++|+|+|.|.+...||||||||.|+|+..+.... ....+.++||+.|.|+... +++|++||||.|+|||
T Consensus 198 e~Vr~~liN~~~~~HpfHlHGh~F~v~~~g~~~~--------~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HC 269 (299)
T 3t9w_A 198 ERVEWIAIGHGSNFHTFHLHGHRWLDNRTGMRTS--------EYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHC 269 (299)
T ss_dssp CEEEEEEEEESSCCCEEEETTCCEESSSSSSCCS--------TTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEE
T ss_pred CEEEEEEEeccccceeeeEecceEEEEecccccC--------CcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEc
Confidence 9999999999989999999999999987754322 2233568999999998754 4555678999999999
Q ss_pred ccccchhccceEEEEEecCCC
Q 007735 515 ENLDSWYLGQETYVRVVNPEA 535 (591)
Q Consensus 515 Hil~H~~~GM~~~~~V~~p~~ 535 (591)
|+++|++.|||..|+|.+++.
T Consensus 270 Hi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 270 HVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp CSHHHHHTTCEEEEEEECTTS
T ss_pred CCHHHHhcCCeEEEEEECCCC
Confidence 999999999999999987754
No 45
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.92 E-value=7.3e-25 Score=224.91 Aligned_cols=217 Identities=12% Similarity=0.107 Sum_probs=148.1
Q ss_pred ceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeeeeeEEEEccccEEEEEEEeCCC-----------
Q 007735 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQN----------- 281 (591)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~----------- 281 (591)
-|+|+++.|++++++|.|.... ..++|.||..+. .+.||.... .-.|.||+++...+++..+
T Consensus 41 GP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~-~~~dG~~~~-----~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~ 113 (313)
T 3tas_A 41 GPLIELNEGDTLHIEFENTMDV-PVSLHVHGLDYE-ISSDGTKQS-----RSDVEPGGTRTYTWRTHVPGRRADGTWRAG 113 (313)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCSTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CCeEEEECCCEEEEEEEECCCC-CccEeecCCcCC-ccCCCCccc-----cCCcCCCCEEEEEEEeccCCccccccccCC
Confidence 4899999999999999998754 677888887654 256887532 1247899999988877633
Q ss_pred -CCcceEEEEeecccccc---cCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccccccccccCCCCCCCCC
Q 007735 282 -ASTDYYIVASARFVNES---QWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQG 357 (591)
Q Consensus 282 -~g~~y~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~ 357 (591)
.| .||.+.+.....+. ....+.+.-|++ .. +
T Consensus 114 ~~g-t~~YH~h~~~~~~~~~~~~~Gl~G~liV~--~~------------------------------------------~ 148 (313)
T 3tas_A 114 SAG-YWHYHDHVVGTEHGTGGIRNGLYGPVIVR--RK------------------------------------------G 148 (313)
T ss_dssp SCE-EEEEECSSSSSTTCHHHHHHTCEEEEEEE--CT------------------------------------------T
T ss_pred Cce-EEEEeecCcccccchhhhhccccCceEee--cc------------------------------------------c
Confidence 23 45555443211000 000011111111 00 0
Q ss_pred CCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccCC
Q 007735 358 SFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYR 437 (591)
Q Consensus 358 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g 437 (591)
....++++.+.+. .|++|+..+.. ...+.++.|
T Consensus 149 -----~~~~d~e~~l~~~---------d~t~Ng~~~~~---------------------------------~~~l~v~~G 181 (313)
T 3tas_A 149 -----DVLPDRTHTIVFN---------DMTINNRPAHT---------------------------------GPDFEATVG 181 (313)
T ss_dssp -----CBCCSEEEEEEEE---------TTEETTCCTTC---------------------------------CCCEEEETT
T ss_pred -----cccccccceeecc---------chhcccCCccc---------------------------------ccccccccC
Confidence 0112344444431 27788765421 112456789
Q ss_pred cEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEE---eCCccceeeec
Q 007735 438 GFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVS---LDNVGIWNLRT 514 (591)
Q Consensus 438 ~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~---adNpG~W~~HC 514 (591)
++|+|+|.|.+.+.||||||||.|+|+..+... .....+.++||+.|.|++...+++. ++|||.|+|||
T Consensus 182 e~vr~~liN~g~~~hpfHlHGh~F~v~~~~~~~--------~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HC 253 (313)
T 3tas_A 182 DRVEFVMITHGEYYHTFHLHGHRWADNRTGMLT--------GPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHC 253 (313)
T ss_dssp CEEEEEEEEESSCCEEEEETTCCEESSTTSSCC--------STTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEE
T ss_pred CEEEEEEecccccceeeeecCCeeEEEEECCcc--------CCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEe
Confidence 999999999998999999999999998775321 1123478999999999988777775 46999999999
Q ss_pred ccccchhccceEEEEEecCCCC
Q 007735 515 ENLDSWYLGQETYVRVVNPEAT 536 (591)
Q Consensus 515 Hil~H~~~GM~~~~~V~~p~~~ 536 (591)
|+++|++.|||..|+|..++..
T Consensus 254 Hi~~H~~~GM~~~f~V~~~d~~ 275 (313)
T 3tas_A 254 HVQSHSDMGMVGLFLVKKPDGT 275 (313)
T ss_dssp CSHHHHHTTCEEEEEEECTTCC
T ss_pred CChHHHHCCCeEEEEEECCCCC
Confidence 9999999999999999988764
No 46
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.86 E-value=3.9e-23 Score=211.45 Aligned_cols=228 Identities=12% Similarity=0.121 Sum_probs=131.9
Q ss_pred eeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCcee----eeeeeEEEEccccEEEEEEEeCCCCC------
Q 007735 214 ETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTV----QQNYTSLDIHVGQSYSFLVTMDQNAS------ 283 (591)
Q Consensus 214 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~----p~~~d~v~i~pGqR~dvlv~~~~~~g------ 283 (591)
|+|++++|+++|+||.|... ..+.+|.||..+. .+.||.+.. +...+...|.||||++..+++++.+|
T Consensus 60 P~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~d~ 137 (306)
T 1sdd_A 60 PTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDP 137 (306)
T ss_dssp CCEEEETTCEEEEEEEECSS-SCBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSC
T ss_pred CEEEEeCCCEEEEEEEECCC-CcccEeecceecc-cccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCCCC
Confidence 99999999999999999764 4677888887743 267887752 12223467899999999999976532
Q ss_pred --cceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccccccccccCCCCCCCCCCCCc
Q 007735 284 --TDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRY 361 (591)
Q Consensus 284 --~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~ 361 (591)
..||.+++.....+. ...+.+ ++|.+...... ..+.+ +.. +.+ +...+..
T Consensus 138 ~~GT~wYHsH~~~~~q~-~~GL~G-~liV~~~~~~~-~~~~~--~~~--d~e--------~~l~~~d------------- 189 (306)
T 1sdd_A 138 PCLTHIYYSYVNLVEDF-NSGLIG-PLLICKKGTLT-EDGTQ--KMF--EKQ--------HVLMFAV------------- 189 (306)
T ss_dssp SEEEEEEECCSSSHHHH-HTTCCE-EEEEECTTCBC-TTSSB--SSS--CCC--------CCCBCCE-------------
T ss_pred CceEEEEeccCCchhhh-ccCceE-EEEEccCCCCC-ccCCc--Ccc--cce--------EEEEEEe-------------
Confidence 389999875321110 011333 44444321100 00000 000 100 0000000
Q ss_pred CccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccCCcEEE
Q 007735 362 GSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFME 441 (591)
Q Consensus 362 ~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve 441 (591)
+ .....+.......|.|||..|.. .| .+.++.|++++
T Consensus 190 --------~--d~~~~~~~~~~~~~~ING~~~~~--~p-------------------------------~l~v~~G~~vr 226 (306)
T 1sdd_A 190 --------F--DESKSWNQTSSLMYTVNGYVNGT--MP-------------------------------DITVCAHDHIS 226 (306)
T ss_dssp --------E--ETTSSSSCCCCEEECSSSCCSSC--CC-------------------------------CCCCCCC----
T ss_pred --------c--ccccccccCCCcceeeCCEecCC--Cc-------------------------------ceEEcCCCEEE
Confidence 0 00000001112357888876521 11 13456799999
Q ss_pred EEEecCCC--cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccceeeecccccc
Q 007735 442 VILQNNDT--KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDS 519 (591)
Q Consensus 442 ~vl~N~~~--~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~~HCHil~H 519 (591)
|.|.|.+. ..|+||+||+.|++ .| .++||+.|.||+.+.++|.+++||.|+||||+++|
T Consensus 227 lrliN~g~~~~~h~~hlhG~~~~~----dG---------------~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H 287 (306)
T 1sdd_A 227 WHLIGMSSGPELFSIHFNGQVLEQ----NH---------------HKISAITLVSATSTTANMTVSPEGRWTIASLIPRH 287 (306)
T ss_dssp --BBCCCSSSCEECCBCSSTTCEE----TT---------------EECSCCCEETTCCBC--------CCCCCBCCSTTT
T ss_pred EEEEeCCCCCccEEEEECCcEeee----CC---------------EEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHH
Confidence 99999875 47999999999976 12 35999999999999999999999999999999999
Q ss_pred hhccceEEEEEecC
Q 007735 520 WYLGQETYVRVVNP 533 (591)
Q Consensus 520 ~~~GM~~~~~V~~p 533 (591)
++.|||..++|.+.
T Consensus 288 ~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 288 FQAGMQAYIDIKNC 301 (306)
T ss_dssp GGGTCBCCC-----
T ss_pred HhcCCeEEEEEecC
Confidence 99999999998743
No 47
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.84 E-value=1.1e-20 Score=212.64 Aligned_cols=246 Identities=13% Similarity=0.184 Sum_probs=145.9
Q ss_pred ceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceee----eeeeEEEEccccEEEEEEEeCCCCC----c
Q 007735 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQ----QNYTSLDIHVGQSYSFLVTMDQNAS----T 284 (591)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p----~~~d~v~i~pGqR~dvlv~~~~~~g----~ 284 (591)
.|+|++++|+++++||.|.... .+.+|.||.... .+.||.+... ..+....|.|||+++..+++++..| +
T Consensus 68 GP~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G 145 (647)
T 1sdd_B 68 GPVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPG 145 (647)
T ss_dssp CCCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSSS
T ss_pred CceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCC
Confidence 3999999999999999999764 567888887654 5789977421 1223557999999999999987532 3
Q ss_pred ----ceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccc-cccccccCCCCCCCCCCC
Q 007735 285 ----DYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARS-IRWNVSASGARPNPQGSF 359 (591)
Q Consensus 285 ----~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~-~~~~l~~~~~~p~p~~~~ 359 (591)
.||.+.+.....+. ...+.+ ++|........... ..|....+....+.+... ..|.+.. +..
T Consensus 146 ~~c~T~wYHsH~~~~~q~-~~GL~G-~lIV~~~~~~~~~~---~~~~~~~e~~l~l~~~d~~~~w~~~~-----~~~--- 212 (647)
T 1sdd_B 146 SACRAWAYYSAVNPEKDI-HSGLIG-PLLICRKGTLDKET---NMPVDMREFVLLFMVFDEKKSWYYDK-----KPT--- 212 (647)
T ss_dssp CSEEEEEEECCSSHHHHH-TTTCEE-EEEEECTTSSCTTS---CCCSSCCEEEEEEEEEEGGGSSCCC------------
T ss_pred CCceEEEEccCCCCcccc-cccCcc-CEEEeeCCCccccc---CCCCcceeEEEEEEeecCcccccccc-----Ccc---
Confidence 79999887421110 011333 33333322111000 011110011111110000 0011100 000
Q ss_pred CcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccCCcE
Q 007735 360 RYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGF 439 (591)
Q Consensus 360 ~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ 439 (591)
..+.... .. .......+.|||..|. .| .+.++.|++
T Consensus 213 --------~~~~~~~-~~-~~~~~~~~~iNG~~~~---~p-------------------------------~l~v~~G~~ 248 (647)
T 1sdd_B 213 --------RSWRRAS-SE-VKNSHEFHAINGMIYN---LP-------------------------------GLRMYEQEW 248 (647)
T ss_dssp ---------------------CCCEEEEETTBSSC---CC-------------------------------CCEEETTCE
T ss_pred --------cccccCC-cc-hhhcCceeccCCEecC---CC-------------------------------CeEEcCCCE
Confidence 0000000 00 0111346888988651 11 134567999
Q ss_pred EEEEEecCCC--cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccceeeecccc
Q 007735 440 MEVILQNNDT--KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENL 517 (591)
Q Consensus 440 ve~vl~N~~~--~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~~HCHil 517 (591)
|+|.|.|.+. +.||||+|||.|+|++.+ +.++||+.|.||+.+.|+|++++||.|+||||++
T Consensus 249 vrlrliN~~~~~~~h~~hlhG~~f~vi~~d----------------~~~~d~v~l~pg~r~~v~~~~~~pG~w~~hch~~ 312 (647)
T 1sdd_B 249 VRLHLLNLGGSRDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVG 312 (647)
T ss_dssp EEEEEEECCCTTCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEEEECCCH
T ss_pred EEEEEEeCCCCCcceeEEEcCcEEEEecCC----------------CcccceEEECCCeEEEEEEEeccceEeecccCcc
Confidence 9999999874 489999999999998642 4579999999999999999999999999999999
Q ss_pred cchhccceEEEEEecC
Q 007735 518 DSWYLGQETYVRVVNP 533 (591)
Q Consensus 518 ~H~~~GM~~~~~V~~p 533 (591)
+|++.|||..+.|.++
T Consensus 313 ~h~~~Gm~~~~~V~~~ 328 (647)
T 1sdd_B 313 EIQRAGMQTPFLIVDR 328 (647)
T ss_dssp HHHTTTCEEEEEEECT
T ss_pred cccccccccceeeecc
Confidence 9999999999999743
No 48
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.82 E-value=6.1e-20 Score=189.52 Aligned_cols=248 Identities=17% Similarity=0.145 Sum_probs=161.4
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCc-ceEEEEEeCCeeEEEeecCCceeeeeeeEEEEcc
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHV 268 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~p 268 (591)
..+++||+.. .|+|++++|+++++|++|.... ..+.+++||.. +.||... ...|.|
T Consensus 59 ~~~~~ng~~p-------------gP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~P 115 (327)
T 1kbv_A 59 RYWTFDGDVP-------------GRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAP 115 (327)
T ss_dssp EEEEETTBSS-------------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCT
T ss_pred EEEEECCccC-------------CCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecC
Confidence 5799999864 3899999999999999999753 46788888863 5788642 124899
Q ss_pred ccEEEEEEEeCCCCCcceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccccccccccccccccc
Q 007735 269 GQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSA 348 (591)
Q Consensus 269 GqR~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~~ 348 (591)
||++++.+++++ +| .||.+++......-....+.+ +++.+. .. ++| .. |....+-. . +|....
T Consensus 116 G~~~~y~f~~~~-~G-t~wyH~h~~~~~~~~~~Gl~G-~~iV~~-~~-----~~p---~~--d~e~~l~~-~--d~~~~~ 178 (327)
T 1kbv_A 116 GRTSTFSFKALQ-PG-LYIYHCAVAPVGMHIANGMYG-LILVEP-KE-----GLP---KV--DKEFYIVQ-G--DFYTKG 178 (327)
T ss_dssp TEEEEEEEECCS-CE-EEEEECCCSSHHHHHHTTCEE-EEEEEC-TT-----CCC---CC--SEEEEEEE-E--EECBSS
T ss_pred CCEEEEEEECCC-Ce-EEEEEeCCCChhhhhhcceEE-EEEEec-CC-----CCC---CC--ceEEEEEe-e--eeeccC
Confidence 999999999986 68 999998653210000011222 333333 11 122 11 21111110 0 011110
Q ss_pred CCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcc
Q 007735 349 SGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRME 428 (591)
Q Consensus 349 ~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~ 428 (591)
. ....+ ....+ +.... ... ...+.|||+.+... .
T Consensus 179 ~---~~~~g-----~~~~~----~~~~~--~~~-~~~~~iNG~~~~~~-------------------------------~ 212 (327)
T 1kbv_A 179 K---KGAQG-----LQPFD----MDKAV--AEQ-PEYVVFNGHVGALT-------------------------------G 212 (327)
T ss_dssp C---TTCCE-----EECBC----HHHHH--HTC-CSEEEETTSTTTTS-------------------------------G
T ss_pred c---ccccc-----ccccC----hhHhc--cCC-CceEEEcCcccCCC-------------------------------C
Confidence 0 00000 00000 00000 011 23578888765210 0
Q ss_pred eEEEeccCCcEEEEEEecCC-CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCc
Q 007735 429 TSVINGTYRGFMEVILQNND-TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNV 507 (591)
Q Consensus 429 ~~v~~~~~g~~ve~vl~N~~-~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNp 507 (591)
...+.++.|++++|.|.|.+ ...|+||||||.|+||+.+++. .+|.++||+.|.||+.+.|.|++++|
T Consensus 213 ~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~-----------~~p~~~d~l~l~pGer~dv~v~~~~p 281 (327)
T 1kbv_A 213 DNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGK-----------LINENVQSTIVPAGGSAIVEFKVDIP 281 (327)
T ss_dssp GGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSS-----------CEECSBSEEEECTTEEEEEEEEECSC
T ss_pred ceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCc-----------CCCCceeEEEECCCCEEEEEEEeCCC
Confidence 12346678999999999986 4689999999999999997542 12678999999999999999999999
Q ss_pred cceeeecccccch-hccceEEEEEecCC
Q 007735 508 GIWNLRTENLDSW-YLGQETYVRVVNPE 534 (591)
Q Consensus 508 G~W~~HCHil~H~-~~GM~~~~~V~~p~ 534 (591)
|.|.||||+.+|. ..||+..++|....
T Consensus 282 G~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 282 GNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp EEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred eEEEEEeccccccccCCcEEEEEECCCC
Confidence 9999999999995 88999999997543
No 49
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.82 E-value=2.7e-19 Score=185.91 Aligned_cols=261 Identities=13% Similarity=0.178 Sum_probs=155.7
Q ss_pred CceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCc-ceEEEEEeCCeeEEEeecCCceeeeeeeEEEEc
Q 007735 189 PDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIH 267 (591)
Q Consensus 189 ~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~ 267 (591)
...+++||+.. .|+|++++|+++|+|+.|.... ..|.++++++.. +.||..+ + .|.
T Consensus 59 ~~~~~~ng~~p-------------gP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~~-----~--~i~ 115 (340)
T 2bw4_A 59 IHAMTFNGSVP-------------GPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGAL-----T--QVN 115 (340)
T ss_dssp EEEEEETTBSS-------------CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG-----C--CBC
T ss_pred EEEEEECCCCC-------------CCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCccc-----e--EeC
Confidence 35799999853 3899999999999999998732 356677776542 2344332 1 399
Q ss_pred cccEEEEEEEeCCCCCcceEEEEeeccc--ccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccccccc
Q 007735 268 VGQSYSFLVTMDQNASTDYYIVASARFV--NESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWN 345 (591)
Q Consensus 268 pGqR~dvlv~~~~~~g~~y~i~~~~~~~--~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~ 345 (591)
|||++++.+++++ +| .||.+++.... .+. ...+.+ +++.+.....+ ...+. |. .++.+..+. .. .|.
T Consensus 116 PG~~~~y~~~~~~-~G-t~wyH~h~~~~~~~~~-~~Gl~G-~~iV~~~~~~~--~~~~~-p~-~~d~e~~l~-l~--D~~ 184 (340)
T 2bw4_A 116 PGEETTLRFKATK-PG-VFVYHCAPEGMVPWHV-TSGMNG-AIMVLPRDGLK--DEKGQ-PL-TYDKIYYVG-EQ--DFY 184 (340)
T ss_dssp TTEEEEEEEECCS-CE-EEEEECCCTTCHHHHH-HTTCEE-EEEEECTBCEE--CTTSC-EE-CCSEEEEEE-EE--EEC
T ss_pred CCCEEEEEEECCC-Ce-EEEEEcCCCCchhhHH-hCcCEE-EEEEccCcCcc--cccCC-Cc-CcceeEEEe-ee--eee
Confidence 9999999999985 78 99999986421 010 011333 33333211100 00110 10 012111110 00 011
Q ss_pred cccCCCCCCCCCCCC-cCcc-c-eeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCC
Q 007735 346 VSASGARPNPQGSFR-YGSI-N-VTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVT 422 (591)
Q Consensus 346 l~~~~~~p~p~~~~~-~~~~-~-~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~ 422 (591)
+. ..+.+.+. +... . .... +... .......|.|||+.|....
T Consensus 185 ~~-----~~~~g~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~iNG~~~~~~~------------------------- 229 (340)
T 2bw4_A 185 VP-----KDEAGNYKKYETPGEAYEDA--VKAM---RTLTPTHIVFNGAVGALTG------------------------- 229 (340)
T ss_dssp CC-----BCTTSCBCCCCSHHHHHHHH--HHHH---HTTCCSEEEETTSTTTTSG-------------------------
T ss_pred ec-----cccCCcccccccccccccch--hhHh---hcCCCCEEEECCccCCccC-------------------------
Confidence 10 00011000 0000 0 0000 0000 0001235888988753110
Q ss_pred CCCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCC-ccceEEeCCCcEEEEE
Q 007735 423 GPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGI-ARTTTQVYPGAWTAIL 501 (591)
Q Consensus 423 ~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~-~rDTv~Vpp~g~~~ir 501 (591)
...+.++.|++++|++.|.+...|++|+|||.|+|+. + |.+. ..|. +.||+.|.||+.+.|.
T Consensus 230 ------~~~l~v~~G~r~Rl~n~~~~~~~~~~~i~gh~~~Vi~-d-G~~~---------~~p~~~~dtv~l~pGer~~v~ 292 (340)
T 2bw4_A 230 ------DHALTAAVGERVLVVHSQANRDTRPHLIGGHGDYVWA-T-GKFR---------NPPDLDQETWLIPGGTAGAAF 292 (340)
T ss_dssp ------GGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEET-T-CCTT---------SCCEEEESCCCBCTTEEEEEE
T ss_pred ------CCceEcCCCCEEEEEECCCCCccceEEecCcceEEeC-C-Cccc---------CCccccceEEEeCCCceEEEE
Confidence 1224567789999988887778899999999999986 2 3221 1122 4799999999999999
Q ss_pred EEeCCccceeeecccc-cchhccceEEEEEecCCC
Q 007735 502 VSLDNVGIWNLRTENL-DSWYLGQETYVRVVNPEA 535 (591)
Q Consensus 502 f~adNpG~W~~HCHil-~H~~~GM~~~~~V~~p~~ 535 (591)
|.+++||.|+||||++ +|++.|||..++|..+..
T Consensus 293 v~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 293 YTFRQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp EECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EECCCCeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 9999999999999999 699999999999986543
No 50
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.81 E-value=4.1e-21 Score=217.86 Aligned_cols=243 Identities=12% Similarity=0.169 Sum_probs=148.2
Q ss_pred ceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeeeeeEEEEccccEEEEEEEeCC---------CCC
Q 007735 213 YETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQ---------NAS 283 (591)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~---------~~g 283 (591)
-|+|+++.|++++++|.|.... .+.+|.||..+.--.-||.+- ..-.|.||++++..+++++ .+|
T Consensus 198 GP~Ir~~~GD~v~v~~~N~l~~-~~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~G 271 (770)
T 2r7e_B 198 GPYIRAEVEDNIMVTFRNQASR-PYSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTKDEFDCK 271 (770)
T ss_dssp CCCCCCCSSSCEEEEEECCSSS-CCCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCSSCCSEE
T ss_pred CCeEEEEcCCEEEEEEEECCCC-CcceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCccCCCCCe
Confidence 4999999999999999999754 677888887665444358642 1236899999999999875 456
Q ss_pred cceEEEEeecccccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccc--cccc-cccccccC--CCCCCCCCC
Q 007735 284 TDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMN--QARS-IRWNVSAS--GARPNPQGS 358 (591)
Q Consensus 284 ~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~--~~~~-~~~~l~~~--~~~p~p~~~ 358 (591)
.||.+.+.....+. ...+.+ ++|........... ..+.. +.+..+- .... -.|-+... ...+.|..
T Consensus 272 -t~wYHsh~~~~~q~-~~GL~G-~liV~~~~~~~~~~---~~~~~--d~E~vl~~~~~de~~swy~~~~~~~~~~~p~~- 342 (770)
T 2r7e_B 272 -AWAYSSDVDLEKDV-HSGLIG-PLLVCHTNTLNPAH---GRQVT--VQEFALFFTIFDETKSWYFTENMERNCRAPCN- 342 (770)
T ss_dssp -EEEECCCSSSSHHH-HTSCCE-EEEEECSTTSCSSS---CCCCS--SEEEECCCCEECCSSSSCTTGGGSSCSCCSSC-
T ss_pred -eEEeeccCCcHHHH-hCCcee-eEEECCCccccccc---CCCcc--ceEEEEEEeecCccccchhccchhhcccCccc-
Confidence 89988776432110 011222 23332211100000 00000 1111000 0000 00000000 00000100
Q ss_pred CCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCcceEEEeccCCc
Q 007735 359 FRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRG 438 (591)
Q Consensus 359 ~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~ 438 (591)
... .... .......|+|||..|. ....+.++.|+
T Consensus 343 -----~~~-------~d~~-~~~~~~~~~ING~~~~---------------------------------~~~~l~v~~Ge 376 (770)
T 2r7e_B 343 -----IQM-------EDPT-FKENYRFHAINGYIMD---------------------------------TLPGLVMAQDQ 376 (770)
T ss_dssp -----CCS-------SSSS-STTTSCEECTTSCTTT---------------------------------TCCCCCCCSSS
T ss_pred -----ccc-------CCcc-ccccCCccccCCccCC---------------------------------CCCCeEEeCCC
Confidence 000 0000 0111224667776541 11223567899
Q ss_pred EEEEEEecCCC--cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccceeeeccc
Q 007735 439 FMEVILQNNDT--KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTEN 516 (591)
Q Consensus 439 ~ve~vl~N~~~--~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~~HCHi 516 (591)
+|+|.|.|.+. ..||||||||.|+|++.+ +.++||+.|+||+++.|+|++||||.|+||||+
T Consensus 377 ~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~d----------------g~~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH~ 440 (770)
T 2r7e_B 377 RIRWYLLSMGSNENIHSIHFSGHVFTVRKKE----------------EYKMALYNLYPGVFETVEMLPSKAGIWRVECLI 440 (770)
T ss_dssp CEEEECCCCCSSSCCCEEEBSSCCEECCSSS----------------CCEESEEECCTTCCCEEEECCSSCBCCCBCCCS
T ss_pred EEEEEEEeCCCCcceEEEEEcCCEEEEEecC----------------CceeeEEEECCCeEEEEEEEeCCCCceEEEecc
Confidence 99999999874 389999999999998764 137999999999999999999999999999999
Q ss_pred ccchhccceEEEEEec
Q 007735 517 LDSWYLGQETYVRVVN 532 (591)
Q Consensus 517 l~H~~~GM~~~~~V~~ 532 (591)
++|++.|||..++|..
T Consensus 441 ~~H~~~GM~~~~~V~s 456 (770)
T 2r7e_B 441 GEHLHAGMSTLFLVYS 456 (770)
T ss_dssp HHHHTTBCCCCCCBCC
T ss_pred cccccccccccccccc
Confidence 9999999999999853
No 51
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.77 E-value=1e-17 Score=173.48 Aligned_cols=263 Identities=12% Similarity=0.086 Sum_probs=149.1
Q ss_pred CceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCc-ceEEEEEeCCeeEEEeecCCceeeeeeeEEEEc
Q 007735 189 PDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIH 267 (591)
Q Consensus 189 ~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~ 267 (591)
...+++||+.. .|+|++++|+++++|+.|.+.. ..|.++++++. ..||.. +. + .|.
T Consensus 52 ~~~~~~ng~~p-------------gP~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~----~~~~~~--~~--~--~i~ 108 (333)
T 1mzy_A 52 LQAMTFDGSIP-------------GPLMIVHEGDYVELTLINPPENTMPHNIDFHAAT----GALGGG--GL--T--LIN 108 (333)
T ss_dssp EEEEEETTBSS-------------CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSC----SGGGGG--GG--C--CBC
T ss_pred EEEEEECCccC-------------CCcEEecCCCEEEEEEEECCCCcccccceecCCC----CCCCCC--ce--e--EeC
Confidence 35789999864 3899999999999999998542 13344444432 123221 11 1 389
Q ss_pred cccEEEEEEEeCCCCCcceEEEEeecc--c-ccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccccccccccccc
Q 007735 268 VGQSYSFLVTMDQNASTDYYIVASARF--V-NESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRW 344 (591)
Q Consensus 268 pGqR~dvlv~~~~~~g~~y~i~~~~~~--~-~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~ 344 (591)
||+++++.+++++ +| .||.+++... . .+. ...+.+.-|++ .....+ .+.. .|. .+|.+..+. ..+ |
T Consensus 109 PG~~~~y~f~~~~-~G-t~~yH~h~~~~~~~~~~-~~Gl~G~~iV~-~~~~~~--~~~~-~p~-~~d~e~~l~-l~D--~ 177 (333)
T 1mzy_A 109 PGEKVVLRFKATR-AG-AFVYHCAPGGPMIPWHV-VSGMAGCIMVL-PRDGLK--DHEG-KPV-RYDTVYYIG-ESD--H 177 (333)
T ss_dssp TTEEEEEEEECCS-CE-EEEEECCCSTTHHHHHH-HTTCEEEEEEE-CTTCCB--CTTS-CBC-CCSEEEEEE-EEE--E
T ss_pred CCCEEEEEEECCC-CE-EEEEeecCCcccchhhh-hCCCEEEEEEc-cCcCcc--cccc-CCC-ccchheeee-eee--e
Confidence 9999999999985 78 9999997641 0 010 01133333333 211100 0111 111 112121110 011 1
Q ss_pred ccccCCCCCCCCCCCC-cCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCC
Q 007735 345 NVSASGARPNPQGSFR-YGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTG 423 (591)
Q Consensus 345 ~l~~~~~~p~p~~~~~-~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~ 423 (591)
.+.. ...+.+. +....-...-.+... .......|.|||+.+..+.
T Consensus 178 ~~~~-----~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ING~~~~~~~-------------------------- 223 (333)
T 1mzy_A 178 YIPK-----DEDGTYMRFSDPSEGYEDMVAVM---DTLIPSHIVFNGAVGALTG-------------------------- 223 (333)
T ss_dssp CCCB-----CTTSCBCCCSSHHHHHHHHHHHH---TTTCCSEEEETTSTTTTSG--------------------------
T ss_pred ccCc-----cccccccccccccccccchhHHh---hccCCcEEEECCcccccCC--------------------------
Confidence 1100 0000000 000000000000000 0011235888987642110
Q ss_pred CCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCC-ccceEEeCCCcEEEEEE
Q 007735 424 PPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGI-ARTTTQVYPGAWTAILV 502 (591)
Q Consensus 424 ~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~-~rDTv~Vpp~g~~~irf 502 (591)
...+.++.|++++|++.|.....|++++|||.|+|++ + |.+.. .|. ++||+.|.||+.+.+.|
T Consensus 224 -----~~~l~v~~Ger~Rl~n~~~~~~~~~h~i~~h~~~Vi~-d-G~~~~---------~p~~~~dtv~l~pGer~~v~v 287 (333)
T 1mzy_A 224 -----EGALKAKVGDNVLFVHSQPNRDSRPHLIGGHGDLVWE-T-GKFHN---------APERDLETWFIRGGTAGAALY 287 (333)
T ss_dssp -----GGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEET-T-CCTTS---------CCEEEESBCCBCTTEEEEEEE
T ss_pred -----CcceEecCCCEEEEEECCCCCccccEEECCCCeEEEe-C-CcccC---------CCccCcceEEECCCceEEEEE
Confidence 1124567789998887776555555567889999987 3 43211 122 58999999999999999
Q ss_pred EeCCccceeeecccccch-hccceEEEEEecCCC
Q 007735 503 SLDNVGIWNLRTENLDSW-YLGQETYVRVVNPEA 535 (591)
Q Consensus 503 ~adNpG~W~~HCHil~H~-~~GM~~~~~V~~p~~ 535 (591)
.+++||.|+||||+++|+ +.|||..++|..+..
T Consensus 288 ~a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 288 KFLQPGVYAYVNHNLIEAVHKGATAHVLVEGEWD 321 (333)
T ss_dssp ECCSCEEEEEEESSHHHHHTTCCEEEEEEESCCC
T ss_pred EcCCCEEEEEecChhhhHhhCCCEEEEEEcCCCC
Confidence 999999999999999997 999999999986543
No 52
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.71 E-value=8.5e-17 Score=173.11 Aligned_cols=248 Identities=13% Similarity=0.125 Sum_probs=160.9
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCc-ceEEEEEeCCeeEEEeecCCceeeeeeeEEEEcc
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHV 268 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~p 268 (591)
..+++||+.. .|+|++++|++++||+.|.... ..+.+|+||+. ..||... ...|.|
T Consensus 49 ~~~~~ng~~p-------------gp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~p 105 (442)
T 2zoo_A 49 VFWSFGETVP-------------GSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAP 105 (442)
T ss_dssp EEEEETTBSS-------------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCT
T ss_pred EEEEECCcCC-------------CCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECC
Confidence 5799999874 3899999999999999998642 47889999975 3688642 225899
Q ss_pred ccEEEEEEEeCCCCCcceEEEEeeccc-ccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCcccccccccccccccc
Q 007735 269 GQSYSFLVTMDQNASTDYYIVASARFV-NESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVS 347 (591)
Q Consensus 269 GqR~dvlv~~~~~~g~~y~i~~~~~~~-~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l~ 347 (591)
|+++++.+++++ +| .||++++.... .+. .....+.+.+.... ++| .. |.+..+. ..+ |...
T Consensus 106 g~~~~y~f~~~~-~G-t~~yH~H~~~~~~~~---~~Gl~G~~iv~~~~-----~~~---~~--d~e~~l~-l~d--~~~~ 167 (442)
T 2zoo_A 106 GHTSTFNFKALN-PG-LYIYHCATAPVGMHI---ANGMYGLILVEPKE-----GLA---PV--DREYYLV-QGD--FYTK 167 (442)
T ss_dssp TCEEEEEEECCS-CE-EEEEECCCSSHHHHH---HTTCEEEEEEECTT-----CCC---CC--SEEEEEE-EEE--ECBS
T ss_pred CCEEEEEEEcCC-Ce-EEEEecCCCChHHHH---hCccEEEEEEeCCC-----CCC---CC--CceEEEE-eee--eecc
Confidence 999999999974 78 99999853211 010 01123333333221 111 11 2121110 000 1111
Q ss_pred cCCCCCCCCCCCCcCccceeEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCCCCCc
Q 007735 348 ASGARPNPQGSFRYGSINVTEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTGPPRM 427 (591)
Q Consensus 348 ~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~ 427 (591)
... + ... ...+.+... .......+.|||+.+...
T Consensus 168 ~~~------~-----~~~-~~~~~~~~~---~~~~~~~~liNG~~~~~~------------------------------- 201 (442)
T 2zoo_A 168 GEF------G-----EAG-LQPFDMAKA---IDEDADYVVFNGSVGSTT------------------------------- 201 (442)
T ss_dssp SCT------T-----CCE-EECBCHHHH---HTTCCSEEEETTSTTTTS-------------------------------
T ss_pred Ccc------c-----ccc-cccCChhHh---ccCCCCEEEECCCcCCCC-------------------------------
Confidence 000 0 000 000000000 001123577888764210
Q ss_pred ceEEEeccCCcEEEEEEecCC-CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCC
Q 007735 428 ETSVINGTYRGFMEVILQNND-TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDN 506 (591)
Q Consensus 428 ~~~v~~~~~g~~ve~vl~N~~-~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adN 506 (591)
..+.+.++.|+++.|.|.|.+ ...|+||+||+.|.|++.+++.. .|.+.|++.|.||+...+.|.+++
T Consensus 202 ~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~-----------~p~~~~~~~l~pg~r~~v~v~~~~ 270 (442)
T 2zoo_A 202 DENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSL-----------KNHNVQTTLIPAGGAAIVEFKVEV 270 (442)
T ss_dssp GGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEECCS
T ss_pred CCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccC-----------CCccceEEEECCCeeEEEEEEcCC
Confidence 001245677999999999975 46899999999999999875421 267899999999999999999999
Q ss_pred ccceeeecccccc-hhccceEEEEEecCCC
Q 007735 507 VGIWNLRTENLDS-WYLGQETYVRVVNPEA 535 (591)
Q Consensus 507 pG~W~~HCHil~H-~~~GM~~~~~V~~p~~ 535 (591)
||.|.+|||.+.| .+.||+..++|...+.
T Consensus 271 ~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 271 PGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp CEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred CCeEEEEecccccccccCceEEEEecCCCC
Confidence 9999999999999 5999999999986554
No 53
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.70 E-value=4.6e-16 Score=161.28 Aligned_cols=259 Identities=14% Similarity=0.210 Sum_probs=153.1
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCc-ceEEEEEeCCeeEEEeecCCceeeeeeeEEEEcc
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS-TSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHV 268 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~p 268 (591)
..+++||+.. .|+|++++|+++++|+.|.... ..|.++++++.. +.||..+ + .|.|
T Consensus 54 ~~~~~ng~~p-------------gP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~---~~~~~~~-----~--~i~p 110 (336)
T 1oe1_A 54 QAMTFNGSMP-------------GPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG---ALGGAKL-----T--NVNP 110 (336)
T ss_dssp EEEEETTBSS-------------CCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG-----C--CBCT
T ss_pred EEEEECCccC-------------CCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC---CCCCcce-----E--EeCC
Confidence 5799999864 3899999999999999998642 467788888753 2233332 1 3899
Q ss_pred ccEEEEEEEeCCCCCcceEEEEeeccc--ccccCCCcceEEEEEecCCCCCCCCCCCCCCCCCcCccccccccccccccc
Q 007735 269 GQSYSFLVTMDQNASTDYYIVASARFV--NESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNV 346 (591)
Q Consensus 269 GqR~dvlv~~~~~~g~~y~i~~~~~~~--~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~l 346 (591)
|+++++.+++++ +| .||.+++.... .+. ...+.+.-|++-.... ..+.+. |. .+|.+..+. ..+ |.+
T Consensus 111 G~~~~y~f~~~~-~G-t~~yH~h~~~~~~~~~-~~Gl~G~liV~~~~~~---~~~~~~-~~-~~D~e~~l~-~~D--~~~ 179 (336)
T 1oe1_A 111 GEQATLRFKADR-SG-TFVYHCAPEGMVPWHV-VSGMSGTLMVLPRDGL---KDPQGK-PL-HYDRAYTIG-EFD--LYI 179 (336)
T ss_dssp TEEEEEEEECCS-CE-EEEEECCCTTCHHHHH-HTTCEEEEEEECTTCC---BCTTSC-BC-CCSEEEEEE-EEE--ECC
T ss_pred CCEEEEEEECCC-Ce-EEEEecCCCCchhHHH-hCCCeEEEEEecCcCC---cccccC-cc-cCCceeEee-eee--eee
Confidence 999999999985 78 99999986421 010 0113333334322111 011111 11 112211110 000 111
Q ss_pred ccCCCCCCCCCCC-CcCcc-ce-eEEEEEecCCCcccCCeeEEEEcCeeccCCCCchhhhccccccccccCCCCCCCCCC
Q 007735 347 SASGARPNPQGSF-RYGSI-NV-TEVYVLRNKPPEMIDGKRRATLSGISFVNPSTPIRLADWFKVKGAYKLDFPTKPVTG 423 (591)
Q Consensus 347 ~~~~~~p~p~~~~-~~~~~-~~-~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~ 423 (591)
.. ...+.+ .+... .. ... +.... .. ....+.|||+.+...
T Consensus 180 ~~-----~~~g~~~~~~~~~~~~~~~--~~~~~--~~-~~~~~liNG~~~~~~--------------------------- 222 (336)
T 1oe1_A 180 PK-----GPDGKYKDYATLAESYGDT--VQVMR--TL-TPSHIVFNGKVGALT--------------------------- 222 (336)
T ss_dssp CB-----CTTSSBCCCSSTGGGHHHH--HHHHH--TT-CCSEEEETTSTTTTS---------------------------
T ss_pred cc-----ccCCceeecccccccccch--hhHhh--cC-CCCEEEECCeeccCC---------------------------
Confidence 00 000000 00000 00 000 00000 00 113577887654210
Q ss_pred CCCcceEEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCC--ccceEEeCCCcEEEEE
Q 007735 424 PPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGI--ARTTTQVYPGAWTAIL 501 (591)
Q Consensus 424 ~~~~~~~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~--~rDTv~Vpp~g~~~ir 501 (591)
+...+.++.|+++.|+..+.....+++++|||.|.|+. .|.+ .+|. +.||+.|++|+.+.+.
T Consensus 223 ----~~~~l~v~~GervRlin~~~~~~~~~~~i~gh~~~Vi~--DG~~----------~~p~~~~~dtv~i~pGer~dvl 286 (336)
T 1oe1_A 223 ----GANALTAKVGETVLLIHSQANRDTRPHLIGGHGDWVWE--TGKF----------ANPPQRDLETWFIRGGSAGAAL 286 (336)
T ss_dssp ----GGGCEEEETTCEEEEEEEESSSCBCEEETTCCEEEEET--TCCT----------TSCCEEEESBCCBCTTEEEEEE
T ss_pred ----CCcceEcCCCCEEEEEecCCCCccceEEECCcCceEeC--CCcC----------cCCccccceEEEECCCCcEEEE
Confidence 01235567899999876666555667667999999986 3322 1232 4699999999999999
Q ss_pred EEeCCccceeeecccccch-hccceEEEEEecCCC
Q 007735 502 VSLDNVGIWNLRTENLDSW-YLGQETYVRVVNPEA 535 (591)
Q Consensus 502 f~adNpG~W~~HCHil~H~-~~GM~~~~~V~~p~~ 535 (591)
+.+++||.|+||||.+.|. +.||+..++|.....
T Consensus 287 v~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 287 YTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp EECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EEcCCCceEEEEechhhccccCCCeEEEEECCCCC
Confidence 9999999999999999886 999999999986543
No 54
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.62 E-value=9.7e-15 Score=156.99 Aligned_cols=237 Identities=11% Similarity=0.066 Sum_probs=152.3
Q ss_pred eEEEEEEEEEEEecCCC-----------eeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeee-cCccCCCCC
Q 007735 27 FVYFDFEVSYITASPLG-----------VPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHW-SGIQQRRSS 93 (591)
Q Consensus 27 ~~~~~~~v~~~~~~~dG-----------~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~-HG~~~~~~~ 93 (591)
.+++.+.++.-....+| .....++|||+. .|+|+|++| ++++|+.|... ....+|+ ||..+.. .
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~v-i 228 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHV-I 228 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEE-E
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEE-E
Confidence 34667777655444333 334689999995 799999999 99999999975 4678999 8976543 4
Q ss_pred CCCCCC----C--CCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCce-----------eeEE-EecCCCCCCCCC
Q 007735 94 WQDGLL----G--TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGF-----------GGFI-INNRAIIPIPFD 155 (591)
Q Consensus 94 ~~DGv~----~--tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~-----------G~li-V~~~~~~~~p~~ 155 (591)
..||.+ . ....|.||+++++.++++ +.|+||++++........+. .+++ +...... .+.
T Consensus 229 ~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~-~~~- 305 (451)
T 2uxt_A 229 SGDQGFLPAPVSVKQLSLAPGERREILVDMS-NGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLL-PLV- 305 (451)
T ss_dssp ECSSSEEEEEEEESSEEECTTCEEEEEEECT-TCCCEEEEC----------------CCCCSCCEEEEEEECSCC-C---
T ss_pred EeCCCccCCceEeceEEECceeEEEEEEEeC-CCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCC-cCc-
Confidence 689963 2 567899999999999995 68999999986433221111 1221 2111100 000
Q ss_pred CCCCcceEEecccccCch-HHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCc
Q 007735 156 TPDGDITILIGDWYTRNH-TALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGIS 234 (591)
Q Consensus 156 ~~d~e~~l~l~d~~~~~~-~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~ 234 (591)
..+.+..|..+...+. ......+.-. ..++|||+.+. .+.+.+.++.|++++|+|+|.
T Consensus 306 --~~~~p~~L~~~~~~~~~~~~~~~~~l~------~~~~iNg~~f~----------~~~~~~~~~~G~~~~~~l~N~--- 364 (451)
T 2uxt_A 306 --TDSLPMRLLPTEIMAGSPIRSRDISLG------DDPGINGQLWD----------VNRIDVTAQQGTWERWTVRAD--- 364 (451)
T ss_dssp ----CCCSCSSSSCCCCCCCSEEEEEEEC------SSSSBTTBCCC----------TTCCCEEEETTCEEEEEEEEE---
T ss_pred --cccCccccCCCCCCCCCCcceEEEEEe------eEEEECCEeCC----------CCCCcEEcCCCCEEEEEEECC---
Confidence 0000000111000000 0000000000 04679999862 123578999999999999997
Q ss_pred ceEEEEEeCCeeEEEeecCCce---eeeeeeEEEEccccEEEEEEEeCCCC---CcceEEEEeec
Q 007735 235 TSLNFRIQNHNLLLAETEGSYT---VQQNYTSLDIHVGQSYSFLVTMDQNA---STDYYIVASAR 293 (591)
Q Consensus 235 ~~~~~~i~gh~~~via~DG~~~---~p~~~d~v~i~pGqR~dvlv~~~~~~---g~~y~i~~~~~ 293 (591)
..|.||||||.|+|++.||.+. +|...|++.| |+++.|.+++++++ | .|.++++..
T Consensus 365 ~~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g-~w~~HCHil 426 (451)
T 2uxt_A 365 EPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHF-PFYFNSQTL 426 (451)
T ss_dssp EEEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTB-CEEEEESSH
T ss_pred CCcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCC-ceEEeCCch
Confidence 4799999999999999999875 3678999999 99999999999642 2 488888864
No 55
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.60 E-value=1.7e-16 Score=135.71 Aligned_cols=90 Identities=17% Similarity=0.216 Sum_probs=72.4
Q ss_pred CCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCC--CCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecCh
Q 007735 53 GKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRS--SWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL 130 (591)
Q Consensus 53 g~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~--~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~ 130 (591)
-+|++|+|++++||+|+ ++|..+.++++||||..++.. ..+||.+.+++.|.||++++|.|++++++|+||||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~- 90 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA- 90 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT-
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCcccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC-
Confidence 36789999999999985 579988999999999865421 0123332345789999999999998668999999999
Q ss_pred hhhhhcCceeeEEEec
Q 007735 131 HFQRASGGFGGFIINN 146 (591)
Q Consensus 131 ~~q~~~Gl~G~liV~~ 146 (591)
.+..+||.|.|+|++
T Consensus 91 -~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 -PHRGAGMVGKITVEG 105 (105)
T ss_dssp -TTGGGTCEEEEEECC
T ss_pred -CchhcCCEEEEEEcC
Confidence 567789999999974
No 56
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.58 E-value=4.3e-14 Score=151.60 Aligned_cols=224 Identities=13% Similarity=0.091 Sum_probs=152.1
Q ss_pred CeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC------CCCccCCCCcEEEEE
Q 007735 43 GVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG------TNCPIPPKWNWTYQF 115 (591)
Q Consensus 43 G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~------tq~~I~PG~~~~Y~f 115 (591)
|.....+++||+. .|.|+|++| ++++|+.|... ....+|++|..+.. .+.||.+. ....|.||++++..+
T Consensus 174 g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~v-i~~DG~~~~~p~~~~~l~l~pgeR~dv~v 250 (439)
T 2xu9_A 174 GKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYL-IAADGGFLEEPLEVSELLLAPGERAEVLV 250 (439)
T ss_dssp CCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEEESCEEECTTCEEEEEE
T ss_pred CCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEE-EecCCCCCCCceEeceEEECCceeEEEEE
Confidence 3445689999996 799999999 99999999975 46789999986543 46899652 346699999999999
Q ss_pred EeCCceeeeEEecChhhh--hh-cCc--------------eeeEEEe--cCCC-CCCCCCCCCCcceEEecccccCchHH
Q 007735 116 QVKDQVGSFFYFPSLHFQ--RA-SGG--------------FGGFIIN--NRAI-IPIPFDTPDGDITILIGDWYTRNHTA 175 (591)
Q Consensus 116 ~~~~~~Gt~wYH~H~~~q--~~-~Gl--------------~G~liV~--~~~~-~~~p~~~~d~e~~l~l~d~~~~~~~~ 175 (591)
++. ++|.||++|+.... .. .|| ....+++ .... .+.|... .-+.+...... .
T Consensus 251 ~~~-~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~l------~~~~~l~~~~~-~ 322 (439)
T 2xu9_A 251 RLR-KEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKPLPLPKAL------SPFPTLPAPVV-T 322 (439)
T ss_dssp ECC-SSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCCCCCCSCC------CCCCCCCCCSE-E
T ss_pred EcC-CCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCccccCcccC------CCcccCCCCCc-c
Confidence 984 69999999984211 10 122 1122222 2111 0111100 00000000000 0
Q ss_pred HHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCc
Q 007735 176 LRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSY 255 (591)
Q Consensus 176 ~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~ 255 (591)
..-.+..+. ....+.|||+.+. .+.+.+.++.|++++|+|.|.+.. .|+||||||.|+|++.+|..
T Consensus 323 r~~~l~~~~---~g~~~~iNg~~~~----------~~~~~~~~~~g~~~~~~~~N~~~~-~HP~HLHG~~F~Vl~~~g~~ 388 (439)
T 2xu9_A 323 RRLVLTEDM---MAARFFINGQVFD----------HRRVDLKGQAQTVEVWEVENQGDM-DHPFHLHVHPFQVLSVGGRP 388 (439)
T ss_dssp EEEEEEEEG---GGTEEEETTBCCC----------TTCCCEEECTTCEEEEEEEECSSS-CEEEEESSCCBEEEEETTEE
T ss_pred eEEEEEeec---cCceEeECCEECC----------CCCCceecCCCCEEEEEEEcCCCC-CCCceeCCCcEEEEeeCCCC
Confidence 000000000 0137899999872 123458999999999999998754 79999999999999999976
Q ss_pred e-eeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeec
Q 007735 256 T-VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASAR 293 (591)
Q Consensus 256 ~-~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~ 293 (591)
. +|...|++.|.||+++.+.++++ .+| .|.++++..
T Consensus 389 ~~~p~~rDTv~v~p~~~v~i~f~ad-npG-~w~~HCHil 425 (439)
T 2xu9_A 389 FPYRAWKDVVNLKAGEVARLLVPLR-EKG-RTVFHCHIV 425 (439)
T ss_dssp CSSCCCBSEEEECTTCEEEEEEECC-SCE-EEEEEESSH
T ss_pred CCCCCCeEEEEeCCCCEEEEEEEcC-CCC-CEEEECCcc
Confidence 5 47889999999999999999987 467 888888864
No 57
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.48 E-value=1.2e-12 Score=143.22 Aligned_cols=240 Identities=13% Similarity=0.106 Sum_probs=154.1
Q ss_pred eEEEEECCCCC---------CCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-----CCCccCCCCc
Q 007735 46 QQVIAINGKFP---------GPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWN 110 (591)
Q Consensus 46 ~~~~~~Ng~~p---------gP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~ 110 (591)
...++|||+.. -|+|+|++|+++++|+.|... ....+|++|..+.. ...||.+. ....|.|||+
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTV-IEVDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEE-EecCCccccceeeeeEEEcccce
Confidence 35789999843 189999999999999999975 46789999976543 46899652 3466999999
Q ss_pred EEEEEEeCCceeeeEEecChhh---hhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchH-----------HH
Q 007735 111 WTYQFQVKDQVGSFFYFPSLHF---QRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHT-----------AL 176 (591)
Q Consensus 111 ~~Y~f~~~~~~Gt~wYH~H~~~---q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~-----------~~ 176 (591)
++..+++.+..|+||.+++... ....|+..+++.........|..... +. ..+.+....... ..
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~~-~~~~~~~l~p~~~~~~p~~~~~~~~ 347 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-SG-TALNEANLIPLINPGAPGNPVPGGA 347 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-CS-CBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-cc-cccchhhcccCCcccCCCcccCCcc
Confidence 9999999655799999998531 12234434555443222111110000 00 000110000000 00
Q ss_pred HH--HhhcCCCCCCCceEEEcCcCCCCCCCc-----------cCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeC
Q 007735 177 RK--TLDAGKGLGMPDGVLINGKGPYQYNTT-----------LVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQN 243 (591)
Q Consensus 177 ~~--~~~~~~~~~~~~~~lING~~~~~~~~~-----------~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~g 243 (591)
.. .+..+. ......+.|||+.+...... ........+.+.++.|++++++++| ...|+|||||
T Consensus 348 ~~~~~l~~~~-~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLHG 423 (521)
T 1v10_A 348 DINLNLRIGR-NATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLHG 423 (521)
T ss_dssp SEEEECCEEC-CSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEESS
T ss_pred eEEEEEEEec-CCceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEcc
Confidence 00 000000 01112688999986321000 0000012367999999999999999 3479999999
Q ss_pred CeeEEEeecCCc----eeeeeeeEEEE-ccccEEEEEEEeCCCCCcceEEEEeecc
Q 007735 244 HNLLLAETEGSY----TVQQNYTSLDI-HVGQSYSFLVTMDQNASTDYYIVASARF 294 (591)
Q Consensus 244 h~~~via~DG~~----~~p~~~d~v~i-~pGqR~dvlv~~~~~~g~~y~i~~~~~~ 294 (591)
|.|+|++.+|.. .+|...|++.| .+|+++.+.+++++ +| .|.++++...
T Consensus 424 h~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDN-PG-~W~~HCHi~~ 477 (521)
T 1v10_A 424 HNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDN-PG-PWFLHCHIDW 477 (521)
T ss_dssp CCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCS-CE-EEEEEESCHH
T ss_pred ceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeCC-Ce-eEEEeeChHH
Confidence 999999999865 35888999999 79999999999985 67 8888988753
No 58
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.48 E-value=1.6e-12 Score=141.68 Aligned_cols=244 Identities=13% Similarity=0.089 Sum_probs=155.3
Q ss_pred eEEEEECCCCC--------CCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-----CCCccCCCCcE
Q 007735 46 QQVIAINGKFP--------GPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWNW 111 (591)
Q Consensus 46 ~~~~~~Ng~~p--------gP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~ 111 (591)
...++|||+.. .|+|+|++|+++++|+.|... ....+|++|..+.. -..||.+. ....|.||+++
T Consensus 165 ~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~ 243 (503)
T 1hfu_A 165 PDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IEVDGELTEPHTVDRLQIFTGQRY 243 (503)
T ss_dssp CSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCEE
T ss_pred CCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEE-EeccCccccccccCeEEEcccceE
Confidence 35789999853 289999999999999999975 46789999976543 46899752 34568999999
Q ss_pred EEEEEeCCceeeeEEecChh--hh-----hhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchH--HH------
Q 007735 112 TYQFQVKDQVGSFFYFPSLH--FQ-----RASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHT--AL------ 176 (591)
Q Consensus 112 ~Y~f~~~~~~Gt~wYH~H~~--~q-----~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~--~~------ 176 (591)
+..+++.+..|+||.+++.. .+ ...|+..+++.........|......+. ..+.++...... ..
T Consensus 244 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~-~~l~~~~l~p~~~~~~p~~~~~ 322 (503)
T 1hfu_A 244 SFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP-AQLNEADLHALIDPAAPGIPTP 322 (503)
T ss_dssp EEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC-CBCCGGGCBBSSSCSCSSCSST
T ss_pred EEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc-CCCccccccccCccCCCCcccC
Confidence 99999965579999999853 11 2334434444433221111110000000 001111100000 00
Q ss_pred ---HHHhhcCCCCCCCceEEEcCcCCCCCCCc-----cCC------CCCcceeEEEecCCEEEEEEeEeCCcceEEEEEe
Q 007735 177 ---RKTLDAGKGLGMPDGVLINGKGPYQYNTT-----LVP------DGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQ 242 (591)
Q Consensus 177 ---~~~~~~~~~~~~~~~~lING~~~~~~~~~-----~~~------~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~ 242 (591)
...+.-... .....+.|||+.+...... ..+ .......++++.|++++++++|......|+||||
T Consensus 323 ~~~~~~~~l~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLH 401 (503)
T 1hfu_A 323 GAADVNLRFQLG-FSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLH 401 (503)
T ss_dssp TCSSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEET
T ss_pred CcceEEEEEEee-ccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEe
Confidence 000000000 0012688999986321000 000 0012367899999999999996544558999999
Q ss_pred CCeeEEEeecCCc----eeeeeeeEEEE-ccccEEEEEEEeCCCCCcceEEEEeecc
Q 007735 243 NHNLLLAETEGSY----TVQQNYTSLDI-HVGQSYSFLVTMDQNASTDYYIVASARF 294 (591)
Q Consensus 243 gh~~~via~DG~~----~~p~~~d~v~i-~pGqR~dvlv~~~~~~g~~y~i~~~~~~ 294 (591)
||.|+|++.+|.. .+|...|++.| .+|+++.+.+++++ +| .|.++++...
T Consensus 402 Gh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~adn-PG-~W~~HCHil~ 456 (503)
T 1hfu_A 402 GHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDN-PG-PWFFHCHIEF 456 (503)
T ss_dssp TCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCS-CE-EEEEEESSHH
T ss_pred cceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcCC-Ce-eeeEecCchh
Confidence 9999999999865 25888999999 79999999999985 57 8888998753
No 59
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.42 E-value=2.8e-12 Score=138.17 Aligned_cols=240 Identities=14% Similarity=0.095 Sum_probs=157.9
Q ss_pred EEEEEEEEEEEecCCCe-------------eeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCC
Q 007735 28 VYFDFEVSYITASPLGV-------------PQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSS 93 (591)
Q Consensus 28 ~~~~~~v~~~~~~~dG~-------------~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~ 93 (591)
.+| +.++......+|. ....+++||+. .|+|+|++|+ ++|+.|... ....+|++|..+.. .
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~v-I 255 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFIL-V 255 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEE-E
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEE-E
Confidence 445 6665554444442 33679999996 6899999999 999999964 66789999987543 5
Q ss_pred CCCCC----CC--CCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCce--------eeEEEecC-CCCCCC-----
Q 007735 94 WQDGL----LG--TNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGF--------GGFIINNR-AIIPIP----- 153 (591)
Q Consensus 94 ~~DGv----~~--tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~--------G~liV~~~-~~~~~p----- 153 (591)
+.||. |. ....|.|||+++..++++ +.|+|-..++.... .|+. -.+.++.. .....|
T Consensus 256 a~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~ 332 (481)
T 3zx1_A 256 GTDGGLIEKTIYKEELFLSPASRVEVLIDAP-KDGNFKLESAYYDR--DKMMVKEEPNTLFLANINLKKENVELPKNLKI 332 (481)
T ss_dssp EETTEEEEEEEEESSEEECTTCEEEEEEECS-SCEEEEEEECCCCC--CCSSCCCCCCCEEEEEEEEECCCCCCCSCSCC
T ss_pred EcCCCccCCceEeCeEEECCccEEEEEEEcC-CCcEEEEEEecccc--cCccccCCCCceeEEEEecCCCCccCCccccC
Confidence 78973 22 456799999999999985 67887776653211 1111 11112211 111111
Q ss_pred ---CCCCCCcceEEecccccCchHHHHHHhhcCCCCC----CCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEE
Q 007735 154 ---FDTPDGDITILIGDWYTRNHTALRKTLDAGKGLG----MPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRI 226 (591)
Q Consensus 154 ---~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~----~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rl 226 (591)
.+..+.+..+.++....+ +. .+....... ....++|||+.+. .+.+.++++.|++++|
T Consensus 333 ~~~~~~~~~~r~~~l~~~~~~----~~-~~~~~~~~~~~~~~~~~~~iNG~~~~----------~~~~~~~~~~G~~v~w 397 (481)
T 3zx1_A 333 FKPSEEPKEFKEIIMSEDHMQ----MH-GMMGKSEGELKIALASMFLINRKSYD----------LKRIDLSSKLGVVEDW 397 (481)
T ss_dssp CCCCCCCCEEEEEEEEECCST----TT-TGGGCCHHHHHHHHHTTEEETTBCCC----------TTCCCEEEETTCCEEE
T ss_pred CCCCCCCCcEEEEEEeccchh----cc-cccccccccccccccceeEECCEeCC----------CCCceEEeCCCCEEEE
Confidence 111222333333221100 00 000000000 0125999999871 2357899999999999
Q ss_pred EEeEeCCcceEEEEEeCCeeEEEee--cCCcee---eeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeec
Q 007735 227 RVHNVGISTSLNFRIQNHNLLLAET--EGSYTV---QQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASAR 293 (591)
Q Consensus 227 RliN~~~~~~~~~~i~gh~~~via~--DG~~~~---p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~ 293 (591)
+|.|.+.. .|.||||||+|+|++. +|.... +...|++.|.||+++.|.++++ .+| .|.++++..
T Consensus 398 ~l~N~~~~-~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d-~pG-~w~~HCHil 466 (481)
T 3zx1_A 398 IVINKSHM-DHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQD-FKG-LRMYHCHIL 466 (481)
T ss_dssp EEEECSSS-CEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCC-SCE-EEEEEESSH
T ss_pred EEEcCCCC-ceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcC-CCe-eEEEEcCCh
Confidence 99997654 8999999999999999 897653 5678999999999999999997 567 888888764
No 60
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.41 E-value=4.4e-13 Score=122.24 Aligned_cols=99 Identities=18% Similarity=0.281 Sum_probs=74.7
Q ss_pred CCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCC------CCCC--CCccCCCC--cE
Q 007735 42 LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDG------LLGT--NCPIPPKW--NW 111 (591)
Q Consensus 42 dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG------v~~t--q~~I~PG~--~~ 111 (591)
-|+..+-+.++|. ++|+|+|++||+|+++++|... ...|.+.+...+..+.+. ..++ ...|.||+ ++
T Consensus 46 ~~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~ 122 (154)
T 2cal_A 46 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYT 122 (154)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEE
T ss_pred cCCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEE
Confidence 3455555666777 6899999999999999999732 456777776544443321 1110 12789999 99
Q ss_pred EEEEEeCCceeeeEEecChhhhhhcCceeeEEEe
Q 007735 112 TYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIIN 145 (591)
Q Consensus 112 ~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 145 (591)
+|.|++ ++|+||||||...|..+||+|.|+|+
T Consensus 123 t~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 123 DFTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 999996 79999999999889999999999984
No 61
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.36 E-value=4.6e-11 Score=129.43 Aligned_cols=244 Identities=12% Similarity=0.089 Sum_probs=152.9
Q ss_pred eEEEEECCCC---------CCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-----CCCccCCCCc
Q 007735 46 QQVIAINGKF---------PGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWN 110 (591)
Q Consensus 46 ~~~~~~Ng~~---------pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~ 110 (591)
...++|||+- +-|.|+|++|+++++|+.|... ....+|++|..+.. ...||.+. ....|.|||+
T Consensus 168 ~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR 246 (495)
T 3t6v_A 168 ADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTI-IETDGVDSQELTVDEIQIFAAQR 246 (495)
T ss_dssp CSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEeCCcccCCEEeeeEEEcCceE
Confidence 4679999972 3478999999999999999854 56789999976543 46899753 3456999999
Q ss_pred EEEEEEeCCceeeeEEecChh---hhhhcCceeeEEEecCCCCCCCCCCCCC-cceEEecccccCchHH-----------
Q 007735 111 WTYQFQVKDQVGSFFYFPSLH---FQRASGGFGGFIINNRAIIPIPFDTPDG-DITILIGDWYTRNHTA----------- 175 (591)
Q Consensus 111 ~~Y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~p~~~~d~-e~~l~l~d~~~~~~~~----------- 175 (591)
++..+++.+..|.||.++... .....|...+++.........|...... ... .+.+........
T Consensus 247 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~~ 325 (495)
T 3t6v_A 247 YSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-CLIETDLHPLSRNGVPGNPHQGG 325 (495)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSS-BCCGGGCCBSSCCCCSSCSSTTC
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCcc-ccccccccccccccCCCccCCCC
Confidence 999999954569999998742 1122233334554432221111100000 000 011111100000
Q ss_pred HHHHhhcCCCCCCCceEEEcCcCCCCCCCc-----------cCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCC
Q 007735 176 LRKTLDAGKGLGMPDGVLINGKGPYQYNTT-----------LVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNH 244 (591)
Q Consensus 176 ~~~~~~~~~~~~~~~~~lING~~~~~~~~~-----------~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh 244 (591)
....+.-... .....+.|||+.+..-... ..........+.++.|++++|.|.|......|+||+|||
T Consensus 326 ~d~~~~l~~~-~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh 404 (495)
T 3t6v_A 326 ADCNLNLSLG-FACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGH 404 (495)
T ss_dssp SSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTC
T ss_pred CcEEEEEEEE-ecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecCC
Confidence 0000000000 0123688999886321100 000011235799999999999998433445899999999
Q ss_pred eeEEEeecCCce----eeeeeeEEEEcc-ccEEEEEEEeCCCCCcceEEEEeecc
Q 007735 245 NLLLAETEGSYT----VQQNYTSLDIHV-GQSYSFLVTMDQNASTDYYIVASARF 294 (591)
Q Consensus 245 ~~~via~DG~~~----~p~~~d~v~i~p-GqR~dvlv~~~~~~g~~y~i~~~~~~ 294 (591)
+|+|++.+|... .|...|++.|.+ |+.+.+.+++++ +| .|.++++...
T Consensus 405 ~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~adn-PG-~W~~HCHi~~ 457 (495)
T 3t6v_A 405 DFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDN-PG-PWFLHCHIDW 457 (495)
T ss_dssp CEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECCS-CE-EEEEEESCHH
T ss_pred cEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcCC-Ce-eEEEEecchh
Confidence 999999988653 588899999997 999999999995 57 7888888653
No 62
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.35 E-value=1.6e-11 Score=132.36 Aligned_cols=230 Identities=15% Similarity=0.107 Sum_probs=146.9
Q ss_pred eEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeee-cCccCCCCCCCCCCC----C--CCCccCCCCcEEEEEEe
Q 007735 46 QQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHW-SGIQQRRSSWQDGLL----G--TNCPIPPKWNWTYQFQV 117 (591)
Q Consensus 46 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~-HG~~~~~~~~~DGv~----~--tq~~I~PG~~~~Y~f~~ 117 (591)
...+++||+. .|.+.+ +|+++++|+.|... ....+++ +|..+.. ...||.+ . ....|.|||+++..+++
T Consensus 183 gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v-Ia~DG~~l~~P~~~~~l~l~pGeR~dvlv~~ 259 (488)
T 3od3_A 183 GDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV-IASDGGLLPEPVKVSELPVLMGERFEVLVEV 259 (488)
T ss_dssp CSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE-EEETTEEEEEEEEESCEEECTTCEEEEEEEE
T ss_pred CCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE-EEeCCCcccCccEeceEEECCCCEEEEEEEe
Confidence 3579999995 588876 67899999999964 4567887 6765432 4689943 2 45679999999999999
Q ss_pred CCceeeeEEecChhhhhhcCc-----ee---eEEEec---CCCCCCCC-----C---C----CCCcceEEecc-cccCch
Q 007735 118 KDQVGSFFYFPSLHFQRASGG-----FG---GFIINN---RAIIPIPF-----D---T----PDGDITILIGD-WYTRNH 173 (591)
Q Consensus 118 ~~~~Gt~wYH~H~~~q~~~Gl-----~G---~liV~~---~~~~~~p~-----~---~----~d~e~~l~l~d-~~~~~~ 173 (591)
. +.++|+.-+..... .|+ .. .+.|.+ ++....|. + . ..+++.+.+.. +.....
T Consensus 260 ~-~~~~~~l~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~ 336 (488)
T 3od3_A 260 N-DNKPFDLVTLPVSQ--MGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLDMMGM 336 (488)
T ss_dssp C-TTCCEEEEECCCSS--TTTTSTTTTSCEEEEEEEEEEEECCCCCCSCCCCCCCCCCCTTCCEEEEEEEECHHHHHHHH
T ss_pred C-CCceEEEEEeccCC--CCcccccccCccceeEecccccCCCCCCCcccccCCCCcccccccceEEEEEeccccccccc
Confidence 5 67788776542211 111 01 222332 11111111 0 0 11233343321 000000
Q ss_pred HHHHH-----Hhh------------cCCCC--------CCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEE
Q 007735 174 TALRK-----TLD------------AGKGL--------GMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRV 228 (591)
Q Consensus 174 ~~~~~-----~~~------------~~~~~--------~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRl 228 (591)
..+.+ .+. .|... .....++|||+.+. .+.+.++++.|+++||+|
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~----------~~~~~~~~~~G~~e~w~l 406 (488)
T 3od3_A 337 QMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFD----------MNKPMFAAAKGQYERWVI 406 (488)
T ss_dssp HHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCC----------TTCCSEECCBSSCEEEEE
T ss_pred ccccccccccccccccccccccccccCccccccccccccccceeeECCeeCC----------CCCCceEcCCCCEEEEEE
Confidence 00000 000 01000 00124799999872 234779999999999999
Q ss_pred eEeCCcceEEEEEeCCeeEEEeecCCceee---eeeeEEEEccccEEEEEEEeCCCC---CcceEEEEeec
Q 007735 229 HNVGISTSLNFRIQNHNLLLAETEGSYTVQ---QNYTSLDIHVGQSYSFLVTMDQNA---STDYYIVASAR 293 (591)
Q Consensus 229 iN~~~~~~~~~~i~gh~~~via~DG~~~~p---~~~d~v~i~pGqR~dvlv~~~~~~---g~~y~i~~~~~ 293 (591)
+|.+....|+||||||+|+|++.||....+ ...|+|.|. |+++.|++++++.+ | .|.++++..
T Consensus 407 ~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G-~~m~HCH~l 475 (488)
T 3od3_A 407 SGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEH-AYMAHCHLL 475 (488)
T ss_dssp ECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGG-CEEEEESSH
T ss_pred EeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEeccCCCCCC-CEEEeCCch
Confidence 999865689999999999999999987643 478999999 99999999998643 4 788888764
No 63
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.34 E-value=4.8e-12 Score=109.20 Aligned_cols=104 Identities=22% Similarity=0.162 Sum_probs=78.3
Q ss_pred EEEEEEEEEE-----ecCCCeeeEE-EEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCC
Q 007735 29 YFDFEVSYIT-----ASPLGVPQQV-IAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN 102 (591)
Q Consensus 29 ~~~~~v~~~~-----~~~dG~~~~~-~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq 102 (591)
.|.+.+.... ...+|..... ..+|++|++|.|++++||+|+++++|.... +||+.... .|+ +
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~~---~ 70 (112)
T 1iby_A 3 NFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FGV---Q 70 (112)
T ss_dssp CEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GTE---E
T ss_pred ceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CCc---e
Confidence 4555554433 2345666555 489999999999999999999999999654 56654331 122 4
Q ss_pred CccCCCCcEEEEEEeCCceeeeEEecChhhhhhcCceeeEEEec
Q 007735 103 CPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRASGGFGGFIINN 146 (591)
Q Consensus 103 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 146 (591)
..+.||++++|.|++ +++|+||||||...... +|.|.|+|.+
T Consensus 71 ~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~-~M~g~i~V~~ 112 (112)
T 1iby_A 71 EVIKAGETKTISFTA-DKAGAFTIWCQLHPKNI-HLPGTLNVVE 112 (112)
T ss_dssp EEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTT-BCCEEEEEEC
T ss_pred eEeCCCCEEEEEEEC-CCCEEEEEECCCCCchH-HCEEEEEEeC
Confidence 679999999999997 68999999999765443 3999999974
No 64
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.31 E-value=4.1e-11 Score=132.09 Aligned_cols=227 Identities=10% Similarity=0.053 Sum_probs=139.2
Q ss_pred cEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-----CCCccCCCCcEEEEEEeC-CceeeeEEecChh
Q 007735 59 TINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWNWTYQFQVK-DQVGSFFYFPSLH 131 (591)
Q Consensus 59 ~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~~Y~f~~~-~~~Gt~wYH~H~~ 131 (591)
+|+|++|+++++|+.|... ....+|++|..+.. ...||.+. ....|.||++++..+++. +..|.||.+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV-VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEE-EEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999965 45678999976543 46899652 346799999999999983 3489999999854
Q ss_pred hhhhcCce--eeEEEecCCCCCCCCCCCCCcceEEecccccCchHHHHHH---hhc-CC--CC----------------C
Q 007735 132 FQRASGGF--GGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTALRKT---LDA-GK--GL----------------G 187 (591)
Q Consensus 132 ~q~~~Gl~--G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~~~~~---~~~-~~--~~----------------~ 187 (591)
.-...... +.|..........|... .... ..|. +........ +.. .. .. .
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~-~p~~----p~~~-~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~ 357 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSP-PPQT----PAWD-DFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVIN 357 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSC-CCCC----CCTT-CHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEEET
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCC-CCCC----Cccc-cccccccccccccccCCCCCCCCCCcEEEEEEEeeccCC
Confidence 21011122 22223222110011000 0000 0000 000000000 000 00 00 0
Q ss_pred CCceEEEcCcCCCCCCCc---------------cCCC------------------CCcceeEEEecCCEEEEEEeEeCC-
Q 007735 188 MPDGVLINGKGPYQYNTT---------------LVPD------------------GIDYETIEVHPGKTYRIRVHNVGI- 233 (591)
Q Consensus 188 ~~~~~lING~~~~~~~~~---------------~~~~------------------~~~~~~~~v~~G~~~rlRliN~~~- 233 (591)
....+.|||+.+...... ..+. ......+.++.|++++|.|.|.+.
T Consensus 358 ~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~ 437 (552)
T 1aoz_A 358 GYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMM 437 (552)
T ss_dssp TEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCS
T ss_pred CeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCccc
Confidence 012478888764211000 0000 001245899999999999999875
Q ss_pred ----cceEEEEEeCCeeEEEee-cCCc----------eeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecc
Q 007735 234 ----STSLNFRIQNHNLLLAET-EGSY----------TVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF 294 (591)
Q Consensus 234 ----~~~~~~~i~gh~~~via~-DG~~----------~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~ 294 (591)
...|.||||||.|+|++. +|.+ .+|...|++.|.+|+.+.+.+++++ +| .|.++++...
T Consensus 438 ~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDN-PG-~W~~HCHi~~ 511 (552)
T 1aoz_A 438 KENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADN-PG-VWAFHCHIEP 511 (552)
T ss_dssp STTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCS-CE-EEEEEESSHH
T ss_pred ccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcCC-Ce-EEEEEeeehh
Confidence 336999999999999998 4653 2477899999999999999999985 67 8888888753
No 65
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.30 E-value=4.1e-11 Score=131.32 Aligned_cols=242 Identities=11% Similarity=0.122 Sum_probs=149.7
Q ss_pred eEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-----CCCccCCCCcEEEEEEeCC
Q 007735 46 QQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWNWTYQFQVKD 119 (591)
Q Consensus 46 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~~Y~f~~~~ 119 (591)
...++|||+. .|+|+|++|+++++|+.|... ....+|++|..+.. ...||.+. ....|.|||+++..+++.+
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTV-VEIDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEE-EeccCcCccccEeceEEECccceEEEEEEcCC
Confidence 4678999996 699999999999999999965 46778888876543 46899753 3466999999999999853
Q ss_pred c-eeeeEEecChhhhhh------cCcee-eEEEecCCC-CCCCCCCCCCcceEEecccccCc----------hHHHHHHh
Q 007735 120 Q-VGSFFYFPSLHFQRA------SGGFG-GFIINNRAI-IPIPFDTPDGDITILIGDWYTRN----------HTALRKTL 180 (591)
Q Consensus 120 ~-~Gt~wYH~H~~~q~~------~Gl~G-~liV~~~~~-~~~p~~~~d~e~~l~l~d~~~~~----------~~~~~~~~ 180 (591)
+ .|.||.......... ....+ +++...... .+.+.. ..++.-.+.|..... +..+.-.+
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~--~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~ 322 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNY--VDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDV 322 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCC--CSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCc--ccccccccccccceeCCCCCCCCCCCeEEEEEE
Confidence 3 578999987432110 01112 222222111 111100 000000000000000 00000000
Q ss_pred hcCCCCCCCceEEEcCcCCCCCCCc------------cCCC--CCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCee
Q 007735 181 DAGKGLGMPDGVLINGKGPYQYNTT------------LVPD--GIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNL 246 (591)
Q Consensus 181 ~~~~~~~~~~~~lING~~~~~~~~~------------~~~~--~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~ 246 (591)
...........++|||+.+..-... ..+. ......+.++.|++++|.|.|.+.. .|+||||||.|
T Consensus 323 ~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~-~HP~HLHGh~F 401 (534)
T 1zpu_A 323 VMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDTG-THPFHLHGHAF 401 (534)
T ss_dssp EEEECTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSSS-CEEEEETTCCE
T ss_pred EeeccCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCCC-CCCeEecCCce
Confidence 0000001123678999975321000 0000 0113568999999999999998754 89999999999
Q ss_pred EEEeecCC-----------c---------eeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecc
Q 007735 247 LLAETEGS-----------Y---------TVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF 294 (591)
Q Consensus 247 ~via~DG~-----------~---------~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~ 294 (591)
+|++.++. + .+|...|++.|.+|+.+.+.+++++ +| .|.++++...
T Consensus 402 ~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aDN-PG-~W~~HCHi~~ 467 (534)
T 1zpu_A 402 QTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADN-PG-VWFFHCHIEW 467 (534)
T ss_dssp EEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECCS-CE-EEEEEECCHH
T ss_pred EEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeCC-Ce-eEEEEeCchh
Confidence 99998753 1 2367889999999999999999985 67 8889998653
No 66
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.29 E-value=5.3e-11 Score=128.96 Aligned_cols=244 Identities=10% Similarity=0.071 Sum_probs=151.3
Q ss_pred eEEEEECCCC--------CCCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-----CCCccCCCCcE
Q 007735 46 QQVIAINGKF--------PGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWNW 111 (591)
Q Consensus 46 ~~~~~~Ng~~--------pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~ 111 (591)
...++|||+- +-|.|+|++|+++++|+.|... ....+|++|..+.. ...||.+. ....|.||+++
T Consensus 166 ~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR~ 244 (499)
T 3pxl_A 166 ADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTI-IEVDSVNSQPLEVDSIQIFAAQRY 244 (499)
T ss_dssp CSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESBEEECTTCEE
T ss_pred CcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEECCcccCceEeeeEEECCCcEE
Confidence 4679999973 3479999999999999999864 56789999986643 46899763 34569999999
Q ss_pred EEEEEeCCceeeeEEecChh--h-hhhcCceeeEEEecCCCCCCCCCCCCCcceEEecccccCchHH-----------HH
Q 007735 112 TYQFQVKDQVGSFFYFPSLH--F-QRASGGFGGFIINNRAIIPIPFDTPDGDITILIGDWYTRNHTA-----------LR 177 (591)
Q Consensus 112 ~Y~f~~~~~~Gt~wYH~H~~--~-q~~~Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~~~~~~~-----------~~ 177 (591)
+..+++.+..|.||..+... . ....|..-+++.........|......+. ..+.+........ ..
T Consensus 245 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~d 323 (499)
T 3pxl_A 245 SFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLVSTPVPGAPSSGGVD 323 (499)
T ss_dssp EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSSCCCCSSCSSTTCSS
T ss_pred EEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-cccccccccccccccCCCcccCCCCc
Confidence 99999965569999987642 1 11122222344443221111110000000 0011111000000 00
Q ss_pred HHhhcCCCCCCCceEEEcCcCCCCCCCc-----------cCCCCCcceeEEEecCCEEEEEEeEeC--CcceEEEEEeCC
Q 007735 178 KTLDAGKGLGMPDGVLINGKGPYQYNTT-----------LVPDGIDYETIEVHPGKTYRIRVHNVG--ISTSLNFRIQNH 244 (591)
Q Consensus 178 ~~~~~~~~~~~~~~~lING~~~~~~~~~-----------~~~~~~~~~~~~v~~G~~~rlRliN~~--~~~~~~~~i~gh 244 (591)
..+.-... .....+.|||+.+..-... ........+.+.++.|++++|.|.|.+ ....|+||+|||
T Consensus 324 ~~~~l~~~-~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh 402 (499)
T 3pxl_A 324 KAINMAFN-FNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGH 402 (499)
T ss_dssp EEEECCEE-ECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTC
T ss_pred EEEEEEEE-ecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCC
Confidence 00000000 0123688999886321000 000011235799999999999999432 234799999999
Q ss_pred eeEEEeecCCce----eeeeeeEEEEcc---ccEEEEEEEeCCCCCcceEEEEeecc
Q 007735 245 NLLLAETEGSYT----VQQNYTSLDIHV---GQSYSFLVTMDQNASTDYYIVASARF 294 (591)
Q Consensus 245 ~~~via~DG~~~----~p~~~d~v~i~p---GqR~dvlv~~~~~~g~~y~i~~~~~~ 294 (591)
+|+|++.+|... .|...|++.+.+ |+.+.+.+++++ +| .+.++++...
T Consensus 403 ~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adn-PG-~W~~HCHi~~ 457 (499)
T 3pxl_A 403 TFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNN-PG-PWFLHCHIDF 457 (499)
T ss_dssp CEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCS-CE-EEEEEESSHH
T ss_pred cEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcCC-Cc-eEEEEeCChh
Confidence 999999887543 588899999986 999999999984 67 7888887643
No 67
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.28 E-value=3.9e-11 Score=128.68 Aligned_cols=214 Identities=11% Similarity=0.052 Sum_probs=142.1
Q ss_pred eeEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeee--cC---ccCCCCCCCCCCCC------CCCccCCCCcEE
Q 007735 45 PQQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHW--SG---IQQRRSSWQDGLLG------TNCPIPPKWNWT 112 (591)
Q Consensus 45 ~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~--HG---~~~~~~~~~DGv~~------tq~~I~PG~~~~ 112 (591)
....++|||+. .|+|+|++| ++++|+.|... ....+|+ +| ..+.. -..||.+. ....|.||++++
T Consensus 168 ~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~v-ia~DG~~~~~P~~~~~l~l~pgeR~d 244 (448)
T 3aw5_A 168 LGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRL-IAVDQGFLARPIEVRALFLAPAERAE 244 (448)
T ss_dssp CCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEE-EEETTEEEEEEEEESCEEECTTCEEE
T ss_pred cccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEE-EEeCCCccCCceEeceEEECCcceEE
Confidence 34679999996 699999999 99999999975 5678999 77 54332 46899642 345699999999
Q ss_pred EEEEeCCceeeeEEecChhhhhhc---Cc----------eee--EEEecCCCCCCCCC---------CCCCcceEEeccc
Q 007735 113 YQFQVKDQVGSFFYFPSLHFQRAS---GG----------FGG--FIINNRAIIPIPFD---------TPDGDITILIGDW 168 (591)
Q Consensus 113 Y~f~~~~~~Gt~wYH~H~~~q~~~---Gl----------~G~--liV~~~~~~~~p~~---------~~d~e~~l~l~d~ 168 (591)
..++++ .+.||..++....... ++ ... |.+......+.|.. ....+..+.+.
T Consensus 245 vlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~L~~lp~~~~~~~~~~~~~l~-- 320 (448)
T 3aw5_A 245 VVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEPPKPTRTRRFALS-- 320 (448)
T ss_dssp EEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCCCCSCCCCCCCCCSEEEEEEEE--
T ss_pred EEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCccccCCCCCCCCCCCceEEEEEe--
Confidence 999995 4789998774211000 01 111 22222111000100 00011111111
Q ss_pred ccCchHHHHHHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEE-EecCCEEEEEEeEeCCcceEEEEEeCCeeE
Q 007735 169 YTRNHTALRKTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIE-VHPGKTYRIRVHNVGISTSLNFRIQNHNLL 247 (591)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~-v~~G~~~rlRliN~~~~~~~~~~i~gh~~~ 247 (591)
.+ ...++|||+.+. .+.+.+. ++.|++++|+|.|.+....|+||||||.|+
T Consensus 321 -------------~~-----~~~~~iNg~~~~----------~~~p~~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~ 372 (448)
T 3aw5_A 321 -------------LS-----GMQWTINGMFWN----------ASNPLFEHVSVEGVELWEIVNDKASMPHPMHLHGFPMW 372 (448)
T ss_dssp -------------EE-----TTEEEETTBCCC----------TTCTTCCCEEECEEEEEEEEECSSSCCEEEEESSSCBE
T ss_pred -------------CC-----CceeeECCCcCC----------CCCCceeccCCCCeEEEEEEcCCCCCCcCEEECCceEE
Confidence 00 125899999872 1235567 899999999999987444899999999999
Q ss_pred EEeecCCce------------ee---eeeeEEEEccccEEEEEEEeCCC-CCcceEEEEeec
Q 007735 248 LAETEGSYT------------VQ---QNYTSLDIHVGQSYSFLVTMDQN-ASTDYYIVASAR 293 (591)
Q Consensus 248 via~DG~~~------------~p---~~~d~v~i~pGqR~dvlv~~~~~-~g~~y~i~~~~~ 293 (591)
|++.+|.+. .| ...|++.|.||+++.+.+++... +...|.++++..
T Consensus 373 Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnpw~~HCHil 434 (448)
T 3aw5_A 373 IIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQLFPFHCHNL 434 (448)
T ss_dssp EEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCEEEEEESSH
T ss_pred EEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCcEEEEcCCh
Confidence 999999764 23 57899999999999999777511 111377777764
No 68
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.26 E-value=1.9e-10 Score=126.72 Aligned_cols=246 Identities=7% Similarity=0.015 Sum_probs=149.0
Q ss_pred eEEEEECCCCC--------CCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-----CCCccCCCCcE
Q 007735 46 QQVIAINGKFP--------GPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCPIPPKWNW 111 (591)
Q Consensus 46 ~~~~~~Ng~~p--------gP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~ 111 (591)
...++|||+.. -|+|+|++|+++++|+.|... ....+|++|..+.. ...||.+. ....|.||+++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV-IAADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEE-EecCCcccCceEeCeEEEccEEEE
Confidence 45789999963 378999999999999999975 45789999976543 46899762 34669999999
Q ss_pred EEEEEeCCceeeeEEecCh--hhh---hhcCceeeEEEecCCCCCCCCCC----CC----CcceE-EecccccCch---H
Q 007735 112 TYQFQVKDQVGSFFYFPSL--HFQ---RASGGFGGFIINNRAIIPIPFDT----PD----GDITI-LIGDWYTRNH---T 174 (591)
Q Consensus 112 ~Y~f~~~~~~Gt~wYH~H~--~~q---~~~Gl~G~liV~~~~~~~~p~~~----~d----~e~~l-~l~d~~~~~~---~ 174 (591)
+..+++.+..|.||..... ... .......+++.........|... .+ .+..+ -+........ .
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~ 353 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFVK 353 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCCcCCCcccccccccccCCCCCCCCccccc
Confidence 9999996557899998775 211 01111122332221111111100 00 00000 0000000000 0
Q ss_pred --HHHHHhhcCCCCCCCceEEEcCcCCCCCCCcc------CCC---CCcceeEEEecCCEEEEEEeEeCC----cceEEE
Q 007735 175 --ALRKTLDAGKGLGMPDGVLINGKGPYQYNTTL------VPD---GIDYETIEVHPGKTYRIRVHNVGI----STSLNF 239 (591)
Q Consensus 175 --~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~------~~~---~~~~~~~~v~~G~~~rlRliN~~~----~~~~~~ 239 (591)
.+.-.+...........+.|||+.+....... .+. ......+.++.++++++.++|... ...|+|
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~ 433 (559)
T 2q9o_A 354 RPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPM 433 (559)
T ss_dssp CGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEE
T ss_pred ceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCcE
Confidence 00000000000112347899999863110000 000 011245888888888877777754 458999
Q ss_pred EEeCCeeEEEeecC---------C-c-----------eeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecc
Q 007735 240 RIQNHNLLLAETEG---------S-Y-----------TVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF 294 (591)
Q Consensus 240 ~i~gh~~~via~DG---------~-~-----------~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~ 294 (591)
|||||.|+|++.++ . + ..|...|++.|.+|+++.+.+++++ +| .|.++++...
T Consensus 434 HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adN-PG-~W~~HCHil~ 507 (559)
T 2q9o_A 434 HLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDN-PG-AWLFHCHIAW 507 (559)
T ss_dssp EESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCS-CE-EEEEEECCHH
T ss_pred EECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCC-Ce-eEEEEecchh
Confidence 99999999999986 2 2 1467899999999999999999885 67 8888998753
No 69
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.25 E-value=1.3e-11 Score=134.45 Aligned_cols=95 Identities=17% Similarity=0.235 Sum_probs=75.5
Q ss_pred CCeeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCce
Q 007735 42 LGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQV 121 (591)
Q Consensus 42 dG~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~ 121 (591)
++....++++|++||+|+|++++||+|+++++|..+..-. +||+.... .|+ ++.|.||++++|.|++ +++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv---~~~i~PG~t~t~~Fta-~~p 566 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV---AMEIGPQMTSSVTFVA-ANP 566 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE---EEEECTTCEEEEEEEC-CSC
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc---ceeeCCCCeEEEEEEC-CCC
Confidence 5677899999999999999999999999999998653212 46665432 232 3679999999999998 699
Q ss_pred eeeEEecCh---hhhhhcCceeeEEEecCC
Q 007735 122 GSFFYFPSL---HFQRASGGFGGFIINNRA 148 (591)
Q Consensus 122 Gt~wYH~H~---~~q~~~Gl~G~liV~~~~ 148 (591)
|+||||||. ..+ .||+|.|+|++++
T Consensus 567 GtY~yhC~e~Cg~~H--~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 567 GVYWYYCQWFCHALH--MEMRGRMLVEPKE 594 (595)
T ss_dssp EEEEEECCSCCSTTC--TTCEEEEEEECC-
T ss_pred EEEEEECCCCCCCCc--cCCEEEEEEEcCC
Confidence 999999993 233 3999999999753
No 70
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.22 E-value=2.4e-10 Score=126.31 Aligned_cols=232 Identities=10% Similarity=0.025 Sum_probs=145.8
Q ss_pred eEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeeecCc-------cCCCCCCCCCCC----C--C------CCcc
Q 007735 46 QQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSGI-------QQRRSSWQDGLL----G--T------NCPI 105 (591)
Q Consensus 46 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~-------~~~~~~~~DGv~----~--t------q~~I 105 (591)
...++|||+. .|.|+|++| ++++|+.|... ....+++.|. .+. -...||.+ . . ...|
T Consensus 254 gd~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~-vIa~DG~~l~~P~~~~~~~~~~~l~l 330 (612)
T 2g23_A 254 GPYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVH-QIGSDGGLLPRPVPVDFDDTLPVLSA 330 (612)
T ss_dssp CSEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEE-EEEETTEEEEEEEEECSSSSSSSEEE
T ss_pred CCEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEE-EEEeCCeEccCCEEecccCcccEEEE
Confidence 4578999995 799999999 99999999964 5667888765 111 23689964 2 2 4569
Q ss_pred CCCCcEEEEEEeCCcee-eeEEecChhhhh------hcCc-eee---EEEecCCC-C--CCCCCC------CCCc-----
Q 007735 106 PPKWNWTYQFQVKDQVG-SFFYFPSLHFQR------ASGG-FGG---FIINNRAI-I--PIPFDT------PDGD----- 160 (591)
Q Consensus 106 ~PG~~~~Y~f~~~~~~G-t~wYH~H~~~q~------~~Gl-~G~---liV~~~~~-~--~~p~~~------~d~e----- 160 (591)
.|||+++.-+++.+.+| +++......... .+|. .+. |.|..+.. . ..|... ...+
T Consensus 331 ~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~~ 410 (612)
T 2g23_A 331 APAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGH 410 (612)
T ss_dssp CTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEE
T ss_pred CCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccccce
Confidence 99999999999964456 466665421111 0011 111 44544321 1 112110 0001
Q ss_pred ceEEec------------ccccCchHHHHH-Hhh-cC-----CCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecC
Q 007735 161 ITILIG------------DWYTRNHTALRK-TLD-AG-----KGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPG 221 (591)
Q Consensus 161 ~~l~l~------------d~~~~~~~~~~~-~~~-~~-----~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G 221 (591)
..+++. -|.......-.. .+. .+ ...+....+.|||+.+ .+.+.++++.|
T Consensus 411 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~-----------~~~~~~~v~~G 479 (612)
T 2g23_A 411 RLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATF-----------NDGLGFTIGEG 479 (612)
T ss_dssp EEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECST-----------TSCCCEEEETT
T ss_pred eEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccC-----------CCCCceEecCC
Confidence 112221 011110000000 000 00 0011224689999987 23578999999
Q ss_pred CEEEEEEeEeCCcceEEEEEeCCeeEEEeecCC------------------------ce---eeeeeeEEEEccccEEEE
Q 007735 222 KTYRIRVHNVGISTSLNFRIQNHNLLLAETEGS------------------------YT---VQQNYTSLDIHVGQSYSF 274 (591)
Q Consensus 222 ~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~------------------------~~---~p~~~d~v~i~pGqR~dv 274 (591)
++++|+|+|.+.. .|+||||||.|+|++.+|. .. ++...|++.|.||+++.|
T Consensus 480 ~~v~w~l~N~~~~-~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i 558 (612)
T 2g23_A 480 THEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRV 558 (612)
T ss_dssp CEEEEEEEECSSS-CEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEE
T ss_pred CEEEEEEEeCCCC-CCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEE
Confidence 9999999999855 8999999999999987532 11 223689999999999999
Q ss_pred EEEeCCCCCcceEEEEeec
Q 007735 275 LVTMDQNASTDYYIVASAR 293 (591)
Q Consensus 275 lv~~~~~~g~~y~i~~~~~ 293 (591)
.++++..+| .|.++++..
T Consensus 559 ~~~~~~~pG-~w~~HCHil 576 (612)
T 2g23_A 559 MGKFDGAYG-RFMYHCHLL 576 (612)
T ss_dssp EEECCSCCE-EEEEEESSH
T ss_pred EEEeCCCCc-cEEEEeCch
Confidence 999996678 899999864
No 71
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.15 E-value=8.8e-11 Score=99.98 Aligned_cols=78 Identities=15% Similarity=0.203 Sum_probs=62.8
Q ss_pred CCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC-CCCccCCCCcEEEEEEeCCceeeeEEecCh
Q 007735 52 NGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSL 130 (591)
Q Consensus 52 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~ 130 (591)
+..|..+.|++++||+|++ .|..+.++++|+++- +||... .+..|.||++++|.| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 5566678999999999655 698877888998852 366654 456799999999888 479999999987
Q ss_pred hhhhhcCceeeEEEe
Q 007735 131 HFQRASGGFGGFIIN 145 (591)
Q Consensus 131 ~~q~~~Gl~G~liV~ 145 (591)
+. ||.|.|+|+
T Consensus 95 H~----gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP----FMRGKVVVE 105 (105)
T ss_dssp CT----TCEEEEEEC
T ss_pred CC----CCEEEEEEC
Confidence 53 999999984
No 72
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.15 E-value=2.7e-10 Score=124.40 Aligned_cols=218 Identities=13% Similarity=0.039 Sum_probs=139.8
Q ss_pred eEEEEECCCCCCCcEEeeCCCEEEEEEEECCCC-CceeeecCc-cCCCCCCCCCCC----C--CCCccCCCCcEEEEEEe
Q 007735 46 QQVIAINGKFPGPTINVTTNNNVVVNVRNKLDE-SLLIHWSGI-QQRRSSWQDGLL----G--TNCPIPPKWNWTYQFQV 117 (591)
Q Consensus 46 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~-~~siH~HG~-~~~~~~~~DGv~----~--tq~~I~PG~~~~Y~f~~ 117 (591)
...++|||+. .|.|+++.| ++++|+.|.... ...+|+.|. .+. ....||.+ . ....|.||++++..+++
T Consensus 230 ~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~-via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~ 306 (513)
T 2wsd_A 230 GETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFI-QIGSDGGLLPRSVKLNSFSLAPAERYDIIIDF 306 (513)
T ss_dssp CSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEE-EEEETTEEEEEEEEESEEEECTTCEEEEEEEC
T ss_pred cceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEE-EEccCCCcccCceEeCeEEECCeeeEEEEEEC
Confidence 4679999996 799999885 999999999754 578999886 433 24689943 2 34669999999999998
Q ss_pred CCceeeeEE-ecChh--hhhhcCceeeEE-EecCC--C----CCCCCCCCC----------CcceEEecccccCchHHHH
Q 007735 118 KDQVGSFFY-FPSLH--FQRASGGFGGFI-INNRA--I----IPIPFDTPD----------GDITILIGDWYTRNHTALR 177 (591)
Q Consensus 118 ~~~~Gt~wY-H~H~~--~q~~~Gl~G~li-V~~~~--~----~~~p~~~~d----------~e~~l~l~d~~~~~~~~~~ 177 (591)
.+.+|.++. ..-.. .....+....++ +.... . ...|..... .+..+.+..
T Consensus 307 ~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~---------- 376 (513)
T 2wsd_A 307 TAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAG---------- 376 (513)
T ss_dssp GGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEE----------
T ss_pred CCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEe----------
Confidence 544676332 21110 000001112222 22111 0 001110000 000111100
Q ss_pred HHhhcCCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCC---
Q 007735 178 KTLDAGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGS--- 254 (591)
Q Consensus 178 ~~~~~~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~--- 254 (591)
.........++|||+.+. +...+.++.|++++|+|.|.+.. .|.||||||.|+|++.+|.
T Consensus 377 -----~~~~~g~~~~~iNg~~~~-----------~~~~~~~~~g~~~~w~l~N~~~~-~HP~HlHG~~F~Vl~~~~~~~~ 439 (513)
T 2wsd_A 377 -----TQDEYGRPVLLLNNKRWH-----------DPVTETPKVGTTEIWSIINPTRG-THPIHLHLVSFRVLDRRPFDIA 439 (513)
T ss_dssp -----EECTTSCEEEEETTBCTT-----------SCCCBCCBTTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEBCHH
T ss_pred -----ecCCCCCceEeECCccCC-----------CcccEecCCCCEEEEEEEcCCCC-CcCEeEeCceEEEEEecCcccc
Confidence 000001125789999862 23457899999999999998755 8999999999999998752
Q ss_pred ------------c------eeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecc
Q 007735 255 ------------Y------TVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF 294 (591)
Q Consensus 255 ------------~------~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~ 294 (591)
. -++...|++.|.||+.+.+.+++++.+| .|.++++...
T Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG-~w~~HCHil~ 496 (513)
T 2wsd_A 440 RYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSG-RYVWHCHALE 496 (513)
T ss_dssp HHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCE-EEEEEESCHH
T ss_pred cccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCC-CEEEEcCChh
Confidence 0 0234789999999999999999965678 8999998653
No 73
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.13 E-value=5.2e-10 Score=122.40 Aligned_cols=231 Identities=12% Similarity=-0.005 Sum_probs=140.3
Q ss_pred eEEEEECCCCCCCcEEeeCCCEEEEEEEECCC-CCceeeecC-------ccCCCCCCCCCC----CC--CCCccCCCCcE
Q 007735 46 QQVIAINGKFPGPTINVTTNNNVVVNVRNKLD-ESLLIHWSG-------IQQRRSSWQDGL----LG--TNCPIPPKWNW 111 (591)
Q Consensus 46 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG-------~~~~~~~~~DGv----~~--tq~~I~PG~~~ 111 (591)
...++|||+. .|.|+|+.| ++++|+.|... ....++++| ..+. .-..||. |. ....|.|||++
T Consensus 201 gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~-vIa~DG~~~~~P~~~~~l~l~pgeR~ 277 (534)
T 3abg_A 201 GDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFK-VIASDSGLLEHPADTSLLYISMAERY 277 (534)
T ss_dssp CSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEE-EEEETTEEEEEEEEESCEEECTTCEE
T ss_pred CceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEE-EEEeCCCcccCceEeceEEECCccEE
Confidence 4579999994 799999985 99999999965 456788876 3222 2468985 22 45679999999
Q ss_pred EEEEEeCCcee-eeEEecChhhhhhc-------CceeeEEEecCCCCCCCCCCCCCcceEEecccc-cCchHHHHHHhhc
Q 007735 112 TYQFQVKDQVG-SFFYFPSLHFQRAS-------GGFGGFIINNRAIIPIPFDTPDGDITILIGDWY-TRNHTALRKTLDA 182 (591)
Q Consensus 112 ~Y~f~~~~~~G-t~wYH~H~~~q~~~-------Gl~G~liV~~~~~~~~p~~~~d~e~~l~l~d~~-~~~~~~~~~~~~~ 182 (591)
+..+++.+.+| +||........... ...+.+-+........+. ....+..+.... ..........+.-
T Consensus 278 dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~---~~~~P~~L~~~~~p~~~~~~~~~~~~ 354 (534)
T 3abg_A 278 EVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD---TSVVPANLRDVPFPSPTTNTPRQFRF 354 (534)
T ss_dssp EEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC---CCCCCCCCCCCSCCCCCCCCCEEEEC
T ss_pred EEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCC---CCCCccccccCCCCCCccccceEEEE
Confidence 99999864467 68876532100000 011222222111100000 000000000000 0000000000000
Q ss_pred CCCCCCCceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEee-cCCc---e--
Q 007735 183 GKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAET-EGSY---T-- 256 (591)
Q Consensus 183 ~~~~~~~~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~-DG~~---~-- 256 (591)
+ .....++|||+.+... .....+.++.|++++|.|.|.+....|.||||||.|+|++. +|.. .
T Consensus 355 ~---~~~~~w~iNG~~f~~~--------~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~ 423 (534)
T 3abg_A 355 G---RTGPTWTINGVAFADV--------QNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMP 423 (534)
T ss_dssp S---CCCSTTCCCCBTTBCT--------TSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCS
T ss_pred e---ccCceeEECCcccCCC--------CCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCc
Confidence 0 0123578999986210 11235689999999999999876558999999999999998 6631 1
Q ss_pred -eeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecc
Q 007735 257 -VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF 294 (591)
Q Consensus 257 -~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~ 294 (591)
+....|++.|.||+++.|.+++.+.+| .|.++++...
T Consensus 424 ~~~~~rDTV~v~pg~~v~I~~~~adnpG-~w~~HCHil~ 461 (534)
T 3abg_A 424 YESGLKDVVWLGRRETVVVEAHYAPFPG-VYMFHCHNLI 461 (534)
T ss_dssp GGGSCBSEECCCSSEEEEEEEECCSCCE-EEEEEESCHH
T ss_pred cccCCcCeEEcCCCCEEEEEEEECCCCc-cEEEecChHH
Confidence 114689999999999999998433678 8999998753
No 74
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.07 E-value=2.1e-10 Score=102.86 Aligned_cols=94 Identities=9% Similarity=0.034 Sum_probs=71.3
Q ss_pred EEeccCCcEEEEEEecCCCc-ceeeeecCceEEEE------EEcCC---CCCCCCCCCCCCCCCCccceEEeCCCcEEEE
Q 007735 431 VINGTYRGFMEVILQNNDTK-MHAYHMSGYAFFVV------GMDYG---EWTDNSRGTYNKWDGIARTTTQVYPGAWTAI 500 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~-~HPfHlHG~~F~Vv------~~g~g---~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~i 500 (591)
.+.++.|++|+|+|.|.+.. .|.||+|+....+. ++..+ .+.+. -....++||..|.||+...+
T Consensus 36 ~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~------~~~~~~~~t~~l~pGet~~v 109 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPA------DKSNIIAESPLANGNETVEV 109 (139)
T ss_dssp EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCS------CCTTEEEECCCBCTTCEEEE
T ss_pred eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCc------ccccccccccccCCCCEEEE
Confidence 45678999999999999888 89999998642110 00000 01110 01235789999999999999
Q ss_pred EEEeCCccceeeecccccchhccceEEEEEe
Q 007735 501 LVSLDNVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 501 rf~adNpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
.|.+++||.|.||||+..|+. ||+..++|.
T Consensus 110 ~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 110 TFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 999999999999999999999 999999873
No 75
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.05 E-value=3.2e-10 Score=96.29 Aligned_cols=85 Identities=14% Similarity=0.022 Sum_probs=65.3
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEe-CCcc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSL-DNVG 508 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~a-dNpG 508 (591)
..+.++.|++|+| .|.+...|++|+||..|... .|.. .+....++..+.||+...++|.+ ++||
T Consensus 19 ~~i~v~~Gd~V~~--~N~~~~~H~v~~~~~~~~~~---~g~~----------~~~~~~~~~~i~pG~~~~~~f~~~~~~G 83 (105)
T 3cvb_A 19 ANVTVHPGDTVKW--VNNKLPPHNILFDDKQVPGA---SKEL----------ADKLSHSQLMFSPGESYEITFSSDFPAG 83 (105)
T ss_dssp SEEEECTTEEEEE--EECSSCCEEEEECTTSSGGG---CHHH----------HHHHCEEEEECSTTCEEEEEECTTSCSE
T ss_pred CEEEEcCCCEEEE--EECCCCCCeEEEeCCCCCcc---cccc----------cccccccccccCCCCeEEEEEecCCCCe
Confidence 4567889999876 48778899999999865220 0000 00122578899999999999998 7999
Q ss_pred ceeeecccccchhccceEEEEEe
Q 007735 509 IWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 509 ~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
.|.||||. |..+||...+.|.
T Consensus 84 ~y~y~C~~--H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 84 TYTYYCAP--HRGAGMVGKITVE 104 (105)
T ss_dssp EEEEECTT--TGGGTCEEEEEEC
T ss_pred eEEEEeCC--chhcCCEEEEEEc
Confidence 99999994 9999999999885
No 76
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=99.02 E-value=5.2e-10 Score=95.23 Aligned_cols=83 Identities=11% Similarity=0.178 Sum_probs=63.0
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC-----CCCCccCCCCcEEEEEEeCCceeeeEEecChh
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL-----GTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH 131 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~-----~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 131 (591)
.+.|++++||+|++ .|....++++|+|+...+ ..+|.. .....+.||++++|.|++++++|+||||||
T Consensus 19 P~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~---~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-- 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNNKVPPHNVVFDAALNP---AKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-- 91 (106)
T ss_dssp SSEEEECTTCEEEE--EECSSSCCCBEECSSSST---TCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT--
T ss_pred CCEEEECCCCEEEE--EECCCCCceEEEeCCCCc---ccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC--
Confidence 47999999999765 588667788888875332 123320 123468999999999986568999999999
Q ss_pred hhhhcCceeeEEEec
Q 007735 132 FQRASGGFGGFIINN 146 (591)
Q Consensus 132 ~q~~~Gl~G~liV~~ 146 (591)
.+...||.|.|+|.+
T Consensus 92 ~H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 92 PHRGAGMVGKITVAG 106 (106)
T ss_dssp TTGGGTCEEEEEECC
T ss_pred ChhhcCcEEEEEEcC
Confidence 677789999999963
No 77
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=98.96 E-value=2.5e-08 Score=109.54 Aligned_cols=240 Identities=7% Similarity=0.014 Sum_probs=145.9
Q ss_pred EEEEECCCCC----------------CCcEEeeCCCEEEEEEEECCC-CCceeeecCccCCCCCCCCCCCC-----CCCc
Q 007735 47 QVIAINGKFP----------------GPTINVTTNNNVVVNVRNKLD-ESLLIHWSGIQQRRSSWQDGLLG-----TNCP 104 (591)
Q Consensus 47 ~~~~~Ng~~p----------------gP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~ 104 (591)
..++|||+-. .++|++++|+++++|+.|... ....+|.+|..+.. ...||.+. ....
T Consensus 226 d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~V-Ia~DG~~v~P~~~~~l~ 304 (580)
T 3sqr_A 226 ENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTV-IANDLVPIVPYTTDTLL 304 (580)
T ss_dssp SEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESSEE
T ss_pred ceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEE-EEeCCccCCceEeeEEE
Confidence 4688999732 379999999999999999965 45689999986643 46899763 3456
Q ss_pred cCCCCcEEEEEEeCCceeeeEEecChhh-----hhhcCceeeEEEecCCCCCCCCCCC--CCcceEEecc--cccCchH-
Q 007735 105 IPPKWNWTYQFQVKDQVGSFFYFPSLHF-----QRASGGFGGFIINNRAIIPIPFDTP--DGDITILIGD--WYTRNHT- 174 (591)
Q Consensus 105 I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~-----q~~~Gl~G~liV~~~~~~~~p~~~~--d~e~~l~l~d--~~~~~~~- 174 (591)
|.|||+++..+++.+..|.||....... +.. +..-+|+..+......|.... ..+. .+.+ .......
T Consensus 305 i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~-~~~~aiL~Y~~~~~~~P~~~~~~~~~~--~~~~~~~~L~P~~~ 381 (580)
T 3sqr_A 305 IGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEA-ANATGILRYDSSSIANPTSVGTTPRGT--CEDEPVASLVPHLA 381 (580)
T ss_dssp ECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTG-GGCEEEEESSTTCCCCCCCCCCCCCCC--SCCSCGGGCCBSSC
T ss_pred EccceEEEEEEEeCCCCCeEEEEEecccccCccCCC-CceEEEEEECCCCCCCCCCCCCCccch--hhcccccccccCCC
Confidence 9999999999999656899999987532 111 112233333322111121100 0000 0000 0000000
Q ss_pred -HHH------HHhhcCCCCCCCceEEEcCcCCCCCCCc--c----CCCC---CcceeEEEe----cCCEEEEEEeEeCC-
Q 007735 175 -ALR------KTLDAGKGLGMPDGVLINGKGPYQYNTT--L----VPDG---IDYETIEVH----PGKTYRIRVHNVGI- 233 (591)
Q Consensus 175 -~~~------~~~~~~~~~~~~~~~lING~~~~~~~~~--~----~~~~---~~~~~~~v~----~G~~~rlRliN~~~- 233 (591)
.+. ..+..+ ......+.|||..+...... + .+.. .....+.+. .|+++.|.|-|.+.
T Consensus 382 ~~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~ 459 (580)
T 3sqr_A 382 LDVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGF 459 (580)
T ss_dssp CBCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSS
T ss_pred CCCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCcc
Confidence 000 000000 01123577899875311000 0 0000 011234443 59999999999872
Q ss_pred cceEEEEEeCCeeEEEeecC-C-----------ceeeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecc
Q 007735 234 STSLNFRIQNHNLLLAETEG-S-----------YTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF 294 (591)
Q Consensus 234 ~~~~~~~i~gh~~~via~DG-~-----------~~~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~ 294 (591)
...|+||+|||+|+|++.+. . +..|...|++.+.+|+...+.+++++ +| .+.++++...
T Consensus 460 ~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adN-PG-~W~~HCHi~~ 530 (580)
T 3sqr_A 460 GIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDN-PG-SWLLHCHIAW 530 (580)
T ss_dssp CCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCS-CE-EEEEEECSHH
T ss_pred ccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCC-Ce-eeEEEECcHH
Confidence 24899999999999998843 2 23478899999999999999999995 57 7888887653
No 78
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.89 E-value=8.6e-09 Score=92.26 Aligned_cols=90 Identities=10% Similarity=0.081 Sum_probs=66.7
Q ss_pred CCCCCcEEeeCCCEEEEEEEECCCC-CceeeecCccC-----------------CCCCCCCCCC-CCCCccCCCCcEEEE
Q 007735 54 KFPGPTINVTTNNNVVVNVRNKLDE-SLLIHWSGIQQ-----------------RRSSWQDGLL-GTNCPIPPKWNWTYQ 114 (591)
Q Consensus 54 ~~pgP~i~v~~Gd~v~v~v~N~l~~-~~siH~HG~~~-----------------~~~~~~DGv~-~tq~~I~PG~~~~Y~ 114 (591)
+|-.+.|++++||+|+++++|.-.. ++.++.|+... ...+..+... .....|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 5556799999999999999998666 78888876421 0000001100 112348999999999
Q ss_pred EEeCCceeeeEEecChhhhhhcCceeeEEEe
Q 007735 115 FQVKDQVGSFFYFPSLHFQRASGGFGGFIIN 145 (591)
Q Consensus 115 f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 145 (591)
|++ +++|+|+||||...+.. ||.|.|+|+
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 998 58999999999888888 999999984
No 79
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=98.82 E-value=5.1e-08 Score=108.88 Aligned_cols=92 Identities=7% Similarity=-0.048 Sum_probs=74.2
Q ss_pred ceEEEcCcCCCCCCCccCCCCCcceeEEEecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCce-------------
Q 007735 190 DGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYT------------- 256 (591)
Q Consensus 190 ~~~lING~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~------------- 256 (591)
..+.+||+.+ .+...+.++.|++++|.|.|.+.. .|.||||||.|+|++.+|...
T Consensus 459 ~~~~~n~~~~-----------~~~~~~~~~~g~~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~ 526 (612)
T 3gyr_A 459 KTYRRTARTF-----------NDGLGFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTP 526 (612)
T ss_dssp EEEEEEECST-----------TSCCCEEEETTCEEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSC
T ss_pred ccccccCccC-----------CCCcceEeCCCCEEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCccccccccccccc
Confidence 4577888875 224678999999999999999866 799999999999998765321
Q ss_pred --------------eeeeeeEEEEccccEEEEEEEeCCCCCcceEEEEeecc
Q 007735 257 --------------VQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARF 294 (591)
Q Consensus 257 --------------~p~~~d~v~i~pGqR~dvlv~~~~~~g~~y~i~~~~~~ 294 (591)
++...|++.|.+|+.+.|.+++.+.+| .|.++++...
T Consensus 527 ~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG-~w~~HCHil~ 577 (612)
T 3gyr_A 527 VRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYG-RFMYHCHLLE 577 (612)
T ss_dssp EEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCE-EEEEEESSHH
T ss_pred cccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCc-ceEEcCCChH
Confidence 122479999999999999999766788 8889998753
No 80
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.77 E-value=5.2e-08 Score=87.22 Aligned_cols=92 Identities=13% Similarity=0.100 Sum_probs=66.6
Q ss_pred CCCCCcEEeeCCCEEEEEEEE--CCCCCceeeecCc------------cCC----CCCCCCCCC--CCCCccCCCCcEEE
Q 007735 54 KFPGPTINVTTNNNVVVNVRN--KLDESLLIHWSGI------------QQR----RSSWQDGLL--GTNCPIPPKWNWTY 113 (591)
Q Consensus 54 ~~pgP~i~v~~Gd~v~v~v~N--~l~~~~siH~HG~------------~~~----~~~~~DGv~--~tq~~I~PG~~~~Y 113 (591)
+|-.+.|++++||+|+++++| .....+.++.+.. ... .-+..|... .....|.||++.++
T Consensus 29 ~F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~ 108 (140)
T 1qhq_A 29 AFAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSV 108 (140)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEE
T ss_pred eEeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEE
Confidence 454579999999999999999 6566777776631 000 000001111 11245899999999
Q ss_pred EEEeCCceeeeEEecChhhhhhcCceeeEEEec
Q 007735 114 QFQVKDQVGSFFYFPSLHFQRASGGFGGFIINN 146 (591)
Q Consensus 114 ~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 146 (591)
.|++ +++|+|||||+...+...||.|.|+|.+
T Consensus 109 ~~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 109 TFRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 9998 6899999999988788889999999974
No 81
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.73 E-value=1.2e-08 Score=86.67 Aligned_cols=85 Identities=13% Similarity=0.099 Sum_probs=62.5
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEe-CCcc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSL-DNVG 508 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~a-dNpG 508 (591)
..+.++.|++|.|+ |.+...|+||+|+..+.. ..|.. . .....|++.+.||+...+.|.+ +.||
T Consensus 20 ~~i~v~~Gd~V~~~--n~~~~~H~~~~~~~~~~~---~~g~~----~------~~~~~~~~~~~pG~~~~~~f~~~~~~G 84 (106)
T 2gim_A 20 AKLTIKPGDTVEFL--NNKVPPHNVVFDAALNPA---KSADL----A------KSLSHKQLLMSPGQSTSTTFPADAPAG 84 (106)
T ss_dssp SEEEECTTCEEEEE--ECSSSCCCBEECSSSSTT---CCHHH----H------HHHCBCSCCCSTTCEEEEECCTTCCSE
T ss_pred CEEEECCCCEEEEE--ECCCCCceEEEeCCCCcc---ccccc----c------hhccccceeeCCCCEEEEEEecCCCCc
Confidence 35678899999886 777789999998764310 00000 0 0011467788999999998887 8999
Q ss_pred ceeeecccccchhccceEEEEEe
Q 007735 509 IWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 509 ~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
.|.|||| .|..+||...+.|.
T Consensus 85 ~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 85 EYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEEEECT--TTGGGTCEEEEEEC
T ss_pred eEEEEeC--ChhhcCcEEEEEEc
Confidence 9999999 59999999999885
No 82
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.70 E-value=3.6e-08 Score=82.88 Aligned_cols=79 Identities=11% Similarity=0.138 Sum_probs=63.0
Q ss_pred CCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChh
Q 007735 52 NGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH 131 (591)
Q Consensus 52 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 131 (591)
|..|-...|++++||+|++.++|.-...+++...+... ...+.||++.+|.|+. +++|+|.|+|..
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~------------~~~~~pg~~~~~~~t~-~~~G~Y~y~C~~- 87 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGI------------DVVVESGKEKNITVKP-KSAGTYELICRY- 87 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTE------------EEEECTTCEEEEEECC-CSCEEEEEECTT-
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCc------------ceeecCCcceeEEEec-ccCceEEEECcc-
Confidence 55665568999999999999999866666665554321 1357899999999997 789999999974
Q ss_pred hhhhcCceeeEEEe
Q 007735 132 FQRASGGFGGFIIN 145 (591)
Q Consensus 132 ~q~~~Gl~G~liV~ 145 (591)
+...||.|.|+|+
T Consensus 88 -H~~~gM~G~i~Ve 100 (100)
T 4hci_A 88 -HLLKGMEGKVIVK 100 (100)
T ss_dssp -TGGGTCEEEEEEC
T ss_pred -ccCCCCEEEEEEC
Confidence 5667999999985
No 83
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.68 E-value=1.6e-08 Score=84.51 Aligned_cols=77 Identities=14% Similarity=0.219 Sum_probs=58.4
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC-----CCCCccCCCCcEEEEEEeCCceeeeEEecChh
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL-----GTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLH 131 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~-----~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 131 (591)
.+.|++++||+|+ ++|.-..++++|+|+...+ +|.. .....+.||+++++.|+ ++|+|+|||+
T Consensus 17 P~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p-----~~~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~-- 84 (98)
T 2plt_A 17 PKTLTIKSGETVN--FVNNAGFPHNIVFDEDAIP-----SGVNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCE-- 84 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECGGGSC-----TTCCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECG--
T ss_pred CCEEEECCCCEEE--EEECCCCceEEEEeCCCCC-----CccccccccccceecCCCCEEEEEeC---CCeEEEEEcC--
Confidence 4789999999876 4788667899999985321 2211 11245899999998774 6999999999
Q ss_pred hhhhcCceeeEEEe
Q 007735 132 FQRASGGFGGFIIN 145 (591)
Q Consensus 132 ~q~~~Gl~G~liV~ 145 (591)
.+...||.|.|+|+
T Consensus 85 ~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 85 PHQGAGMVGKIIVQ 98 (98)
T ss_dssp GGGGGTCEEEEEEC
T ss_pred CccccCCeEEEEEC
Confidence 56667999999984
No 84
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.63 E-value=1.7e-08 Score=84.41 Aligned_cols=83 Identities=16% Similarity=0.198 Sum_probs=57.7
Q ss_pred CCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhh
Q 007735 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQR 134 (591)
Q Consensus 55 ~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~ 134 (591)
|-.+.|++++||+|++ .|.-..++++|.++...++. ..++.......+.||+++++.| +++|+|+|||+ .+.
T Consensus 16 F~P~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~-~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~~~C~--~H~ 87 (98)
T 1pcs_A 16 FEPSTVTIKAGEEVKW--VNNKLSPHNIVFDADGVPAD-TAAKLSHKGLLFAAGESFTSTF---TEPGTYTYYCE--PHR 87 (98)
T ss_dssp EESSEEEECTTCEEEE--EECSSCCEEEEECCSSSCHH-HHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECG--GGT
T ss_pred EeCCEEEECCCCEEEE--EECCCCCcEEEEeCCCCCcc-ccccccccccccCCCCEEEEEc---CCCeEEEEEcC--Ccc
Confidence 3346899999999765 47755678888876422100 0000001124589999999877 47999999999 567
Q ss_pred hcCceeeEEEe
Q 007735 135 ASGGFGGFIIN 145 (591)
Q Consensus 135 ~~Gl~G~liV~ 145 (591)
..||.|.|+|+
T Consensus 88 ~~gM~G~i~V~ 98 (98)
T 1pcs_A 88 GAGMVGKVVVE 98 (98)
T ss_dssp TTTCEEEEEEC
T ss_pred ccCCeEEEEEC
Confidence 78999999984
No 85
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.61 E-value=1e-07 Score=84.37 Aligned_cols=78 Identities=17% Similarity=0.158 Sum_probs=56.3
Q ss_pred CCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC-CCCccCCCCcEEEEEEeCCceeeeEEecCh
Q 007735 52 NGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSL 130 (591)
Q Consensus 52 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~ 130 (591)
+..|-.+.|++++||+|++ .|....++++++... .+|... ....+.||++++|.| +++|+|+|||-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~-------~~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCCCceEEEEeCC-------CCCcccccccccCCCCEEEEEc---CCCEEEEEEeCC
Confidence 4556567999999999865 488666666665432 123222 334689999999888 369999999986
Q ss_pred hhhhhcCceeeEEEe
Q 007735 131 HFQRASGGFGGFIIN 145 (591)
Q Consensus 131 ~~q~~~Gl~G~liV~ 145 (591)
+. ||.|.|+|+
T Consensus 122 H~----gM~G~I~V~ 132 (132)
T 3c75_A 122 HP----FMRGKVIVE 132 (132)
T ss_dssp CT----TCEEEEEEC
T ss_pred Cc----CCEEEEEEC
Confidence 32 999999984
No 86
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.60 E-value=8e-08 Score=79.01 Aligned_cols=76 Identities=17% Similarity=0.298 Sum_probs=56.1
Q ss_pred CCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhh
Q 007735 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQR 134 (591)
Q Consensus 55 ~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~ 134 (591)
|-.+.|++++||+|++ .|.-+.+++++.++.. ++. .....+.||+++++.| +++|+|||||+ .+.
T Consensus 16 f~P~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~----~~~----~~~~~~~~g~~~~~~f---~~~G~y~~~C~--~H~ 80 (91)
T 1bxv_A 16 FEPSTIEIQAGDTVQW--VNNKLAPHNVVVEGQP----ELS----HKDLAFSPGETFEATF---SEPGTYTYYCE--PHR 80 (91)
T ss_dssp EESSEEEECTTCEEEE--EECSSCCEEEEETTCG----GGC----EEEEECSTTCEEEEEC---CSCEEEEEECT--TTG
T ss_pred EeCCEEEECCCCEEEE--EECCCCCcEEEEeCCC----ccC----cccceeCCCCEEEEEe---CCCEEEEEEeC--CCc
Confidence 4457899999999865 5775577888877621 000 1224689999988877 47999999999 455
Q ss_pred hcCceeeEEEe
Q 007735 135 ASGGFGGFIIN 145 (591)
Q Consensus 135 ~~Gl~G~liV~ 145 (591)
..||.|.|+|+
T Consensus 81 ~~gM~g~i~V~ 91 (91)
T 1bxv_A 81 GAGMVGKIVVQ 91 (91)
T ss_dssp GGTCEEEEEEC
T ss_pred cCCCEEEEEEC
Confidence 56999999984
No 87
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.59 E-value=7.5e-08 Score=86.18 Aligned_cols=99 Identities=8% Similarity=0.001 Sum_probs=69.8
Q ss_pred EEeccCCcEEEEEEec--CCCcceeeeecCc--eEEEEEEcCCCCCCCCCCCCC---CCCCCccceEEeCCCcEEEEEEE
Q 007735 431 VINGTYRGFMEVILQN--NDTKMHAYHMSGY--AFFVVGMDYGEWTDNSRGTYN---KWDGIARTTTQVYPGAWTAILVS 503 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N--~~~~~HPfHlHG~--~F~Vv~~g~g~~~~~~~~~~n---~~~p~~rDTv~Vpp~g~~~irf~ 503 (591)
.+.++.|++|.|++.| .+...|.||++.. .|.-+.. .+.+...+ ..|- -....+++|..|.||....+.|.
T Consensus 34 ~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~t~~l~pG~~~~~~~~ 111 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVN-TAAQNNAD-ALFVPPPDTPNALAWTAMLNAGESGSVTFR 111 (140)
T ss_dssp EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHH-HHHHTCGG-GTTCCCTTCTTEEEECCCBCTTEEEEEEEE
T ss_pred eEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhh-hhhhhccc-ccccCccccccccccceeeCCCceeEEEEE
Confidence 3567889999999999 6678999999842 1110000 00000000 0000 01134678999999999999999
Q ss_pred eCCccceeeecccccchhccceEEEEEe
Q 007735 504 LDNVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 504 adNpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
++.||.|.|||++..|...||...++|.
T Consensus 112 ~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 112 TPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp CCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred eCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 9999999999999999999999999885
No 88
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.56 E-value=1.8e-07 Score=81.48 Aligned_cols=75 Identities=9% Similarity=0.070 Sum_probs=53.6
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhc
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 136 (591)
...|+|++||+|++.++|. + |++.......-||.. ...+.||++++|.| +++|+|||+|. .+...
T Consensus 20 P~~i~V~~GdtV~f~~~~~---~-----H~v~~~~~~~P~g~~--~f~~~pg~t~s~TF---~~pG~y~y~C~--~H~~~ 84 (123)
T 3erx_A 20 PAFVRAEPGDVINFVPTDK---S-----HNVEAIKEILPEGVE--SFKSKINESYTLTV---TEPGLYGVKCT--PHFGM 84 (123)
T ss_dssp SSEEEECTTEEEEEEESST---T-----CCCEECTTSSCTTCC--CCBCCTTCCEEEEE---CSCEEEEEECG--GGTTT
T ss_pred CCEEEECCCCEEEEEECCC---C-----ceEEEcCCcCCCCcc--ceecCCCCEEEEEe---CCCeEEEEEeC--CCCcC
Confidence 3689999999988887772 3 444321111123321 24467999988888 46999999999 56778
Q ss_pred CceeeEEEec
Q 007735 137 GGFGGFIINN 146 (591)
Q Consensus 137 Gl~G~liV~~ 146 (591)
||.|.|+|.+
T Consensus 85 GM~G~I~V~~ 94 (123)
T 3erx_A 85 GMVGLVQVGD 94 (123)
T ss_dssp TCEEEEEESS
T ss_pred CcEEEEEECC
Confidence 9999999986
No 89
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.55 E-value=1.6e-07 Score=78.40 Aligned_cols=81 Identities=16% Similarity=0.073 Sum_probs=60.6
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..+.++.|++|+| .|.+...|.+|+|+..+ ...++. ..+++|+..+.||+...++| +.||.
T Consensus 18 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~------p~~~~~---------~~~~~~~~~~~pG~~~~~tf--~~~G~ 78 (98)
T 2plt_A 18 KTLTIKSGETVNF--VNNAGFPHNIVFDEDAI------PSGVNA---------DAISRDDYLNAPGETYSVKL--TAAGE 78 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECGGGS------CTTCCH---------HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCC------CCcccc---------ccccccceecCCCCEEEEEe--CCCeE
Confidence 3567889999887 57777899999987521 000000 01246889999999887765 69999
Q ss_pred eeeecccccchhccceEEEEEe
Q 007735 510 WNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V~ 531 (591)
|.||||. |..+||...+.|.
T Consensus 79 y~y~C~~--H~~~gM~G~i~V~ 98 (98)
T 2plt_A 79 YGYYCEP--HQGAGMVGKIIVQ 98 (98)
T ss_dssp EEEECGG--GGGGTCEEEEEEC
T ss_pred EEEEcCC--ccccCCeEEEEEC
Confidence 9999994 9999999999873
No 90
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.54 E-value=2.1e-07 Score=77.75 Aligned_cols=80 Identities=13% Similarity=-0.002 Sum_probs=59.7
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..+.++.|++|.|+ |.+...|.+|+|+..+- +... .....|+..+.||+...+.| +.||.
T Consensus 19 ~~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~p--g~~~--------------~~~~~~~~~~~pG~~~~~tf--~~~G~ 78 (98)
T 1pcs_A 19 STVTIKAGEEVKWV--NNKLSPHNIVFDADGVP--ADTA--------------AKLSHKGLLFAAGESFTSTF--TEPGT 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECCSSSC--HHHH--------------HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCcEEEEeCCCCC--cccc--------------ccccccccccCCCCEEEEEc--CCCeE
Confidence 35678899999887 77778999999874310 0000 00125788999999887766 89999
Q ss_pred eeeecccccchhccceEEEEEe
Q 007735 510 WNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V~ 531 (591)
|.||||. |..+||...+.|.
T Consensus 79 y~~~C~~--H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 79 YTYYCEP--HRGAGMVGKVVVE 98 (98)
T ss_dssp EEEECGG--GTTTTCEEEEEEC
T ss_pred EEEEcCC--ccccCCeEEEEEC
Confidence 9999995 9999999999873
No 91
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.52 E-value=2e-07 Score=78.39 Aligned_cols=79 Identities=8% Similarity=0.063 Sum_probs=55.1
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCC--------CCCCCCCCCccCCCCcEEEEEEeCCceeeeEEec
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSW--------QDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFP 128 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~--------~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~ 128 (591)
.+.|++++||+|+ +.|.-..+++++.+.- .... +.+.......+.||+++++.| +++|+|+|||
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C 87 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVGETGHNIVFDIP---AGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYC 87 (102)
T ss_dssp SSEEEECTTCCEE--EEECSSSCBCCEECCC---TTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEEC
T ss_pred CCEEEECCCCEEE--EEECCCCCeEEEEeCc---ccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEe
Confidence 4789999999976 4587555667766621 0000 001111224589999999877 4799999999
Q ss_pred ChhhhhhcCceeeEEEe
Q 007735 129 SLHFQRASGGFGGFIIN 145 (591)
Q Consensus 129 H~~~q~~~Gl~G~liV~ 145 (591)
+ .+...||.|.|+|+
T Consensus 88 ~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 88 T--PHKSANMKGTLTVK 102 (102)
T ss_dssp S--TTGGGTCEEEEEEC
T ss_pred C--CCcccCCeEEEEEC
Confidence 9 66778999999984
No 92
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.50 E-value=1.8e-07 Score=81.85 Aligned_cols=77 Identities=13% Similarity=0.183 Sum_probs=53.7
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhc
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 136 (591)
.+.|++++||+|++.+.|. + |++.......-||. ....+.||++++|.| +.+|+|||||.. +...
T Consensus 22 P~~i~V~~GDtVtf~n~~~---~-----H~v~~~~~~~P~g~--~~f~s~pGet~s~TF---~~pG~y~y~C~~--H~~~ 86 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK---G-----HNSALMKGGAPEGA--ETWKGKINEEITVTL---SKPGVYMYQCAP--HVGM 86 (127)
T ss_dssp SSEEEECTTCEEEEECSSS---S-----CCCEECTTCSCTTC--CCCBCCTTCCCEEEC---CSCEEEEEECTT--TGGG
T ss_pred CCEEEECCCCEEEEEECCC---C-----ceEEEccCcCCCCc--cceecCCCCEEEEEe---CCCeEEEEEeCC--CCcC
Confidence 4799999999987766653 3 44432111111222 124467999988888 469999999994 5668
Q ss_pred CceeeEEEecCC
Q 007735 137 GGFGGFIINNRA 148 (591)
Q Consensus 137 Gl~G~liV~~~~ 148 (591)
||.|.|+|.++.
T Consensus 87 GM~G~I~V~~~~ 98 (127)
T 3tu6_A 87 GMIGAIVVGEPA 98 (127)
T ss_dssp TCEEEEEESSCT
T ss_pred CcEEEEEECcCC
Confidence 999999999753
No 93
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.49 E-value=3.3e-07 Score=75.25 Aligned_cols=73 Identities=16% Similarity=0.134 Sum_probs=57.6
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..+.++.|+.|.|+ |.+...|.+|+|+.. +...++..+.||+...+.| +.||.
T Consensus 19 ~~i~v~~Gd~V~~~--n~~~~~H~v~~~~~~-----------------------~~~~~~~~~~~g~~~~~~f--~~~G~ 71 (91)
T 1bxv_A 19 STIEIQAGDTVQWV--NNKLAPHNVVVEGQP-----------------------ELSHKDLAFSPGETFEATF--SEPGT 71 (91)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEETTCG-----------------------GGCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCcEEEEeCCC-----------------------ccCcccceeCCCCEEEEEe--CCCEE
Confidence 34678889998876 666789999998721 1125778889998877765 89999
Q ss_pred eeeecccccchhccceEEEEEe
Q 007735 510 WNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V~ 531 (591)
|.||||. |...||...+.|.
T Consensus 72 y~~~C~~--H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 72 YTYYCEP--HRGAGMVGKIVVQ 91 (91)
T ss_dssp EEEECTT--TGGGTCEEEEEEC
T ss_pred EEEEeCC--CccCCCEEEEEEC
Confidence 9999994 9889999998873
No 94
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.47 E-value=3.9e-07 Score=75.85 Aligned_cols=77 Identities=10% Similarity=0.235 Sum_probs=55.5
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC---CCCCccCCCCcEEEEEEeCCceeeeEEecChhhh
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL---GTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQ 133 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~---~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q 133 (591)
.+.|++++||+| ++.|.-..+++++.++... .+|.. .....+.||+++++.| +++|+|+|||+ .+
T Consensus 18 P~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~--~H 85 (97)
T 1b3i_A 18 PKALSISAGDTV--EFVMNKVGPHNVIFDKVPA-----GESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCT--PH 85 (97)
T ss_dssp SSEEEECTTCEE--EEEECSSCCCCBEEEECCT-----TSCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECS--ST
T ss_pred CCEEEECCCCEE--EEEECCCCCeEEEEeCCCC-----ccccccccccceecCCCCEEEEEe---CCCeEEEEEcc--Ch
Confidence 468999999996 4558755567777765422 12211 1124589999999877 47999999999 56
Q ss_pred hhcCceeeEEEe
Q 007735 134 RASGGFGGFIIN 145 (591)
Q Consensus 134 ~~~Gl~G~liV~ 145 (591)
...||.|.|+|+
T Consensus 86 ~~~gM~G~i~V~ 97 (97)
T 1b3i_A 86 RGAGMVGTITVE 97 (97)
T ss_dssp TTTTCEEEEEEC
T ss_pred hhcCCEEEEEEC
Confidence 667999999984
No 95
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.45 E-value=7.2e-07 Score=74.55 Aligned_cols=77 Identities=9% Similarity=0.202 Sum_probs=56.7
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC-------CCCCccCCCCcEEEEEEeCCceeeeEEecC
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL-------GTNCPIPPKWNWTYQFQVKDQVGSFFYFPS 129 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~-------~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H 129 (591)
.+.|++++||+|+ ++|.-..++++|.++... .+|.. .....+.||+++++.|+ ++|+|+|||+
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~ 85 (99)
T 1byp_A 16 PSDLSIASGEKIT--FKNNAGFPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCA 85 (99)
T ss_dssp SSEEEECTTEEEE--EEECSSCCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECG
T ss_pred CCEEEECCCCEEE--EEECCCCcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcC
Confidence 4689999999865 578866678888776422 22321 11235799999988774 6999999999
Q ss_pred hhhhhhcCceeeEEEe
Q 007735 130 LHFQRASGGFGGFIIN 145 (591)
Q Consensus 130 ~~~q~~~Gl~G~liV~ 145 (591)
.+...||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 --PHAGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CccccCCEEEEEEC
Confidence 56677999999984
No 96
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.44 E-value=7.4e-07 Score=74.50 Aligned_cols=77 Identities=12% Similarity=0.189 Sum_probs=55.8
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC-------CCCCccCCCCcEEEEEEeCCceeeeEEecC
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL-------GTNCPIPPKWNWTYQFQVKDQVGSFFYFPS 129 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~-------~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H 129 (591)
.+.|++++||+|++ +|.-..+++++.++... .+|.. .....+.||+++++.|+ ++|+|+|||+
T Consensus 16 P~~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~-----p~~~~~~~~~~~~~~~~~~~G~~~~~tf~---~~G~y~~~C~ 85 (99)
T 1plc_A 16 PSEFSISPGEKIVF--KNNAGFPHNIVFDEDSI-----PSGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCS 85 (99)
T ss_dssp SSEEEECTTCEEEE--EECSSCCBCCEECTTSS-----CTTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECG
T ss_pred CCEEEECCCCEEEE--EECCCCceEEEEeCCCC-----cccccccccccccCccccCCCCEEEEEEC---CCceEEEEcC
Confidence 46899999998755 78765677777665321 12221 11235799999988774 6999999999
Q ss_pred hhhhhhcCceeeEEEe
Q 007735 130 LHFQRASGGFGGFIIN 145 (591)
Q Consensus 130 ~~~q~~~Gl~G~liV~ 145 (591)
.+..+||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 --PHQGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CCcccCCEEEEEEC
Confidence 56778999999984
No 97
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.43 E-value=4e-07 Score=79.15 Aligned_cols=76 Identities=9% Similarity=0.027 Sum_probs=53.1
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhc
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 136 (591)
...|+|++||+|++...+ .++++..+.. ..-+|. ....+.||++++|.| +.+|+|||||. .+...
T Consensus 21 P~~i~V~~GDTV~f~n~~---~~Hnv~~~~~-----~~p~g~--~~~~~~pg~t~s~TF---~~~G~y~Y~C~--~H~~~ 85 (124)
T 3ef4_A 21 PGFVKVEAGDTVKFVPTD---KSHNAESVRE-----VWPEGV--APVKGGFSKEVVFNA---EKEGLYVLKCA--PHYGM 85 (124)
T ss_dssp SSEEEECTTCEEEEECSS---SSCCCEECTT-----TSCTTS--CCCBCCTTCCEEEEC---CSSEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEEEEECC---CCccEEEeCC-----cCCCCc--cccccCCCCEEEEEe---CCCeEEEEEcC--CCCcC
Confidence 469999999997655443 4544444321 111222 224567999988888 46899999996 56778
Q ss_pred CceeeEEEecC
Q 007735 137 GGFGGFIINNR 147 (591)
Q Consensus 137 Gl~G~liV~~~ 147 (591)
||.|.|+|.++
T Consensus 86 GM~G~I~V~~p 96 (124)
T 3ef4_A 86 GMVVLVQVGKP 96 (124)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEECCC
Confidence 99999999874
No 98
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.41 E-value=1.2e-06 Score=74.99 Aligned_cols=73 Identities=11% Similarity=0.166 Sum_probs=57.6
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.+.++.|+.|.|.+.|.+...|.|++... .-+..+.||+...+.|.++.||.|
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~---------------------------~~~~~i~pG~~~~~~f~~~~~G~y 91 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAF---------------------------GVQEVIKAGETKTISFTADKAGAF 91 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGG---------------------------TEEEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCC---------------------------CceeEeCCCCEEEEEEECCCCEEE
Confidence 46778899999999999877666655422 125678999999999999999999
Q ss_pred eeecccccchhccceEEEEEe
Q 007735 511 NLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~ 531 (591)
.||||+..|... |...+.|.
T Consensus 92 ~~~C~~~~~~~~-M~g~i~V~ 111 (112)
T 1iby_A 92 TIWCQLHPKNIH-LPGTLNVV 111 (112)
T ss_dssp EEBCSSSCTTTB-CCEEEEEE
T ss_pred EEECCCCCchHH-CEEEEEEe
Confidence 999999555333 88888875
No 99
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.32 E-value=4.7e-07 Score=75.38 Aligned_cols=78 Identities=12% Similarity=0.149 Sum_probs=57.4
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.+.++.|++|.|+ |.+...|.+++++..+ ..+ . .....++..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~-----~~~------~------~~~~~~~~~~~~g~~~~~tf--~~~G~y 78 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNKVGPHNVIFDKVPA-----GES------A------PALSNTKLAIAPGSFYSVTL--GTPGTY 78 (97)
T ss_dssp EEEECTTCEEEEE--ECSSCCCCBEEEECCT-----TSC------H------HHHCBCCCCCSCSCCEEEEC--CSCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCeEEEEeCCCC-----ccc------c------ccccccceecCCCCEEEEEe--CCCeEE
Confidence 4567889998876 7767789999986543 000 0 00114667788888877766 899999
Q ss_pred eeecccccchhccceEEEEEe
Q 007735 511 NLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~ 531 (591)
.|||+. |..+||...+.|.
T Consensus 79 ~y~C~~--H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 79 SFYCTP--HRGAGMVGTITVE 97 (97)
T ss_dssp EEECSS--TTTTTCEEEEEEC
T ss_pred EEEccC--hhhcCCEEEEEEC
Confidence 999994 9999999998873
No 100
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.29 E-value=2.4e-06 Score=71.53 Aligned_cols=72 Identities=21% Similarity=0.232 Sum_probs=60.0
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.+.++.|+.|.|++.|.+...|.|.+.+..+ ...+.||....+.|.++.||.|
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~---------------------------~~~~~pg~~~~~~~t~~~~G~Y 81 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKSEHTFTIKKLGI---------------------------DVVVESGKEKNITVKPKSAGTY 81 (100)
T ss_dssp EEEECTTSCEEEEEEECSSSCEEEEEGGGTE---------------------------EEEECTTCEEEEEECCCSCEEE
T ss_pred EEEECCCCEEEEEEEcCCCceEEEEEecCCc---------------------------ceeecCCcceeEEEecccCceE
Confidence 4678899999999999988888887755432 2356788889999999999999
Q ss_pred eeecccccchhccceEEEEEe
Q 007735 511 NLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~ 531 (591)
.|+|.. |...||...+.|.
T Consensus 82 ~y~C~~--H~~~gM~G~i~Ve 100 (100)
T 4hci_A 82 ELICRY--HLLKGMEGKVIVK 100 (100)
T ss_dssp EEECTT--TGGGTCEEEEEEC
T ss_pred EEECcc--ccCCCCEEEEEEC
Confidence 999987 9889999988873
No 101
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.26 E-value=1.4e-06 Score=72.84 Aligned_cols=83 Identities=13% Similarity=0.005 Sum_probs=59.3
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..+.++.|++|.| .|.+...|.+|+++..|- .+ .+. .. ....+|++.+.||+...+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~~~~~~~~~p-----~g-~~~-----~~--~~~~~~~~~~~~G~~~~~~f--~~~G~ 79 (99)
T 1byp_A 17 SDLSIASGEKITF--KNNAGFPHNDLFDKKEVP-----AG-VDV-----TK--ISMPEEDLLNAPGEEYSVTL--TEKGT 79 (99)
T ss_dssp SEEEECTTEEEEE--EECSSCCBCCEECTTSSC-----TT-CCH-----HH--HSCCTTCCBCSTTCEEEEEE--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCcceEEEeCCCCc-----cc-ccc-----cc--ccccccceeeCCCCEEEEEe--CCCcE
Confidence 4567888999877 577778999999875430 00 000 00 01225667788998877766 69999
Q ss_pred eeeecccccchhccceEEEEEe
Q 007735 510 WNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V~ 531 (591)
|.|||+. |..+||...+.|.
T Consensus 80 y~~~C~~--H~~~gM~G~i~V~ 99 (99)
T 1byp_A 80 YKFYCAP--HAGAGMVGKVTVN 99 (99)
T ss_dssp EEEECGG--GTTTTCEEEEEEC
T ss_pred EEEEcCC--ccccCCEEEEEEC
Confidence 9999994 9999999999873
No 102
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.25 E-value=2.6e-06 Score=74.08 Aligned_cols=76 Identities=12% Similarity=0.128 Sum_probs=50.4
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhc
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 136 (591)
.+.|++++||+|++...|. + |.+........||.. .....||++++|.| +.+|+|+|+|.. +...
T Consensus 20 P~~i~V~~GdtV~f~~~~~---~-----H~v~~~~~~~p~~~~--~~~~~pG~t~~~tF---~~~G~y~y~C~~--H~~~ 84 (123)
T 1paz_A 20 PAYIKANPGDTVTFIPVDK---G-----HNVESIKDMIPEGAE--KFKSKINENYVLTV---TQPGAYLVKCTP--HYAM 84 (123)
T ss_dssp SSEEEECTTCEEEEEESSS---S-----CCCEECTTCSCTTCC--CCBCCTTCCEEEEC---CSCEEEEEECTT--TGGG
T ss_pred CCEEEECCCCEEEEEECCC---C-----eEEEEecccCCCCcc--ceecCCCCEEEEEe---CCCEEEEEEeCC--cccC
Confidence 4689999999976544432 3 443321111123321 13346999888777 469999999974 6667
Q ss_pred CceeeEEEecC
Q 007735 137 GGFGGFIINNR 147 (591)
Q Consensus 137 Gl~G~liV~~~ 147 (591)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1paz_A 85 GMIALIAVGDS 95 (123)
T ss_dssp TCEEEEEESSS
T ss_pred CCEEEEEEcCC
Confidence 99999999873
No 103
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.23 E-value=1.5e-06 Score=72.54 Aligned_cols=79 Identities=10% Similarity=0.020 Sum_probs=54.6
Q ss_pred CCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCC-----CCCCccCCCCcEEEEEEeCCceeeeEEecC
Q 007735 55 FPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLL-----GTNCPIPPKWNWTYQFQVKDQVGSFFYFPS 129 (591)
Q Consensus 55 ~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~-----~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H 129 (591)
|-.+.|++++||+|++ .|.-..++++....- .+-+|.- .....+.||+++++.| +++|+|+|+|.
T Consensus 15 F~P~~i~v~~GdtV~~--~n~~~~~H~v~~~~~-----~~p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~ 84 (98)
T 1iuz_A 15 FVPSKISVAAGEAIEF--VNNAGFPHNIVFDED-----AVPAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCE 84 (98)
T ss_dssp EESSEEEECTTCEEEE--EECSSCCEEEEECTT-----SSCTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECT
T ss_pred EeCCEEEECCCCEEEE--EECCCCCEEEEEeCC-----CCccccccccccccccccCCCCEEEEEc---CCCEEEEEEch
Confidence 4357899999999665 577545666665531 1112321 0113589999998877 47999999998
Q ss_pred hhhhhhcCceeeEEEe
Q 007735 130 LHFQRASGGFGGFIIN 145 (591)
Q Consensus 130 ~~~q~~~Gl~G~liV~ 145 (591)
. +...||.|.|+|+
T Consensus 85 ~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 85 P--HAGAGMKMTITVQ 98 (98)
T ss_dssp T--TGGGTCEEEEEEC
T ss_pred h--hccCCCEEEEEEC
Confidence 6 5556999999984
No 104
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.20 E-value=3e-06 Score=73.76 Aligned_cols=76 Identities=8% Similarity=0.092 Sum_probs=50.9
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhc
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 136 (591)
.+.|++++||+|++ .|.-. + |.+.......-||.. ...+.||++++|.| +.+|+|+|+|.. +...
T Consensus 20 P~~i~V~~GdtV~f--~n~~~-~-----H~v~~~~~~~p~~~~--~~~~~pG~t~~~tF---~~~G~y~y~C~~--H~~~ 84 (123)
T 1pmy_A 20 PALVRLKPGDSIKF--LPTDK-G-----HNVETIKGMAPDGAD--YVKTTVGQEAVVKF---DKEGVYGFKCAP--HYMM 84 (123)
T ss_dssp SSEEEECTTCEEEE--ECSSS-S-----CCCEECTTSSCTTCC--CCBCCTTSCEEEEC---CSCEEEEEECST--TTTT
T ss_pred CCEEEECCCCEEEE--EECCC-C-----cEEEEecccCCCCcc--ceecCCCCEEEEEe---CCCeEEEEEeCC--cccc
Confidence 46899999999665 55422 3 443321111223321 23457999988877 369999999984 6667
Q ss_pred CceeeEEEecC
Q 007735 137 GGFGGFIINNR 147 (591)
Q Consensus 137 Gl~G~liV~~~ 147 (591)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1pmy_A 85 GMVALVVVGDK 95 (123)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEEcCC
Confidence 99999999864
No 105
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.19 E-value=7.6e-06 Score=71.68 Aligned_cols=92 Identities=15% Similarity=0.079 Sum_probs=61.4
Q ss_pred CCCCCcEEeeCC-CEEEEEEEECCCC-------CceeeecCccC-------CCC------CCCCCCCC-CCCccCCCCcE
Q 007735 54 KFPGPTINVTTN-NNVVVNVRNKLDE-------SLLIHWSGIQQ-------RRS------SWQDGLLG-TNCPIPPKWNW 111 (591)
Q Consensus 54 ~~pgP~i~v~~G-d~v~v~v~N~l~~-------~~siH~HG~~~-------~~~------~~~DGv~~-tq~~I~PG~~~ 111 (591)
+|--..|.|++| |+|+|+|+|.-.. +..|--+|..+ ... +..|.-.. ....|.||++.
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 454458999999 9999999998532 23333333110 000 00111111 12358999999
Q ss_pred EEEEEeC--CceeeeEEecChhhhhhcCceeeEEEec
Q 007735 112 TYQFQVK--DQVGSFFYFPSLHFQRASGGFGGFIINN 146 (591)
Q Consensus 112 ~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 146 (591)
++.|+++ .++|+|||.|..-.++. ||.|.|+|.+
T Consensus 94 svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 9999984 37999999998776776 8999999963
No 106
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.07 E-value=2.9e-06 Score=71.17 Aligned_cols=86 Identities=10% Similarity=-0.067 Sum_probs=57.8
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..+.++.|++|.|+ |.+...|.++++.-. + ++.. ...-.....+..+++.+.||+...+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~~--n~~~~~H~~~~~~~~--------~-~~~~-~~~~~~~~~~~~~~~~~~pG~~~~~tf--~~~G~ 82 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVGETGHNIVFDIPA--------G-APGT-VASELKAASMDENDLLSEDEPSFKAKV--STPGT 82 (102)
T ss_dssp SEEEECTTCCEEEE--ECSSSCBCCEECCCT--------T-CCHH-HHHHHHHTSCCTTCCBBTTBCEEEECC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCeEEEEeCcc--------c-cccc-ccchhhcccccccceecCCCCEEEEEe--CCCeE
Confidence 45678899999876 777788999987311 1 1000 000000001224667788998877766 89999
Q ss_pred eeeecccccchhccceEEEEEe
Q 007735 510 WNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V~ 531 (591)
|.|||+. |..+||...+.|.
T Consensus 83 y~y~C~~--H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 83 YTFYCTP--HKSANMKGTLTVK 102 (102)
T ss_dssp EEEECST--TGGGTCEEEEEEC
T ss_pred EEEEeCC--CcccCCeEEEEEC
Confidence 9999994 9999999999873
No 107
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.02 E-value=1.7e-05 Score=72.36 Aligned_cols=97 Identities=11% Similarity=0.045 Sum_probs=63.3
Q ss_pred EEEC-C-CCCCCcEEe-eCCCEEEEEEEECCCCC-------ceeeecCccC-------C-C----CCCCCCCCC-CCCcc
Q 007735 49 IAIN-G-KFPGPTINV-TTNNNVVVNVRNKLDES-------LLIHWSGIQQ-------R-R----SSWQDGLLG-TNCPI 105 (591)
Q Consensus 49 ~~~N-g-~~pgP~i~v-~~Gd~v~v~v~N~l~~~-------~siH~HG~~~-------~-~----~~~~DGv~~-tq~~I 105 (591)
+..+ + +|=-..|.| +.||+|+|+|+|.-..+ ..|--+|... . + -+..|.-.. ....|
T Consensus 47 I~~~d~m~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l 126 (167)
T 3ay2_A 47 VESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLI 126 (167)
T ss_dssp EEECTTSCBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCB
T ss_pred EEeCCCceEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceee
Confidence 4445 4 564458999 99999999999985432 2222222100 0 0 000111111 12358
Q ss_pred CCCCcEEEEEEeC-CceeeeEEecChhhhhhcCceeeEEEec
Q 007735 106 PPKWNWTYQFQVK-DQVGSFFYFPSLHFQRASGGFGGFIINN 146 (591)
Q Consensus 106 ~PG~~~~Y~f~~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 146 (591)
.||+++++.|+++ -++|+|||+|..-.++. ||.|-|+|.+
T Consensus 127 ~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 127 GGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp CTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred CCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 9999999999974 16999999998766776 8999999963
No 108
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.00 E-value=3e-05 Score=65.50 Aligned_cols=78 Identities=17% Similarity=0.157 Sum_probs=52.7
Q ss_pred CCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCC-CCCccCCCCcEEEEEEeCCceeeeEEecCh
Q 007735 52 NGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLG-TNCPIPPKWNWTYQFQVKDQVGSFFYFPSL 130 (591)
Q Consensus 52 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~ 130 (591)
+..|-.+.|++++||+|++. |.-...+++..... ..|... ....+.||+++++.| +++|+|+|+|-.
T Consensus 28 ~~~F~P~~i~V~~G~tV~~~--N~d~~~H~v~~~~~-------~~~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~ 95 (106)
T 1id2_A 28 KMKYLTPEVTIKAGETVYWV--NGEVMPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 95 (106)
T ss_dssp TTEESSSEEEECTTCEEEEE--ECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEeCCEEEECCCCEEEEE--ECCCCcEEEEEeCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 34554579999999998654 77544444443321 112111 223588999998888 479999999987
Q ss_pred hhhhhcCceeeEEEe
Q 007735 131 HFQRASGGFGGFIIN 145 (591)
Q Consensus 131 ~~q~~~Gl~G~liV~ 145 (591)
+. ||.|.|+|+
T Consensus 96 H~----~M~G~I~V~ 106 (106)
T 1id2_A 96 HP----FMRGKVIVE 106 (106)
T ss_dssp CT----TCEEEEEEC
T ss_pred CC----CCEEEEEEC
Confidence 42 999999984
No 109
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=97.93 E-value=1.3e-05 Score=66.78 Aligned_cols=82 Identities=13% Similarity=0.017 Sum_probs=57.7
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..+.++.|++|.| .|.+...|.++++...+- .+ .+ ..+. ...++.+.+.||+...+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~p-----~~-~~-----~~~~--~~~~~~~~~~~G~~~~~tf--~~~G~ 79 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNAGFPHNIVFDEDSIP-----SG-VD-----ASKI--SMSEEDLLNAKGETFEVAL--SNKGE 79 (99)
T ss_dssp SEEEECTTCEEEE--EECSSCCBCCEECTTSSC-----TT-CC-----HHHH--CCCTTCCBCSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCCc-----cc-cc-----cccc--ccccCccccCCCCEEEEEE--CCCce
Confidence 4577889999887 677778999999864320 00 00 0000 1124556788898877765 69999
Q ss_pred eeeecccccchhccceEEEEE
Q 007735 510 WNLRTENLDSWYLGQETYVRV 530 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V 530 (591)
|.|||+. |..+||...+.|
T Consensus 80 y~~~C~~--H~~~gM~G~i~V 98 (99)
T 1plc_A 80 YSFYCSP--HQGAGMVGKVTV 98 (99)
T ss_dssp EEEECGG--GTTTTCEEEEEE
T ss_pred EEEEcCC--CcccCCEEEEEE
Confidence 9999995 999999999887
No 110
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.90 E-value=7.2e-05 Score=65.43 Aligned_cols=92 Identities=15% Similarity=0.102 Sum_probs=58.9
Q ss_pred CCCCCcEEe-eCCCEEEEEEEECCCC-------CceeeecCccC-------------CCCCCCCCCCC-CCCccCCCCcE
Q 007735 54 KFPGPTINV-TTNNNVVVNVRNKLDE-------SLLIHWSGIQQ-------------RRSSWQDGLLG-TNCPIPPKWNW 111 (591)
Q Consensus 54 ~~pgP~i~v-~~Gd~v~v~v~N~l~~-------~~siH~HG~~~-------------~~~~~~DGv~~-tq~~I~PG~~~ 111 (591)
+|--..|.| ++||+|+|+|+|.-.. +..|--+|..+ .-.+..|.--. ....|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEE
Confidence 454458999 9999999999998543 22232222100 00001121111 12358999999
Q ss_pred EEEEEeCC-cee-eeEEecChhhhhhcCceeeEEEec
Q 007735 112 TYQFQVKD-QVG-SFFYFPSLHFQRASGGFGGFIINN 146 (591)
Q Consensus 112 ~Y~f~~~~-~~G-t~wYH~H~~~q~~~Gl~G~liV~~ 146 (591)
++.|+++. ++| +|||.|..-.++. ||.|.|+|.+
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~~ 129 (129)
T 2ccw_A 94 SVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLGS 129 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEeC
Confidence 99999840 355 5999998766776 8999999963
No 111
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.88 E-value=2.4e-05 Score=67.89 Aligned_cols=74 Identities=12% Similarity=0.102 Sum_probs=49.1
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecChhhhhhc
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSLHFQRAS 136 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 136 (591)
.+.|++++||+|++ .|.-. . |++.......-+|. ....+.||++++|.| +++|+|||+|..+..
T Consensus 20 P~~i~V~~GdtV~f--~n~d~-~-----H~v~~~~~~~p~~~--~~~~~~~g~t~~~tF---~~~G~y~y~C~~H~~--- 83 (122)
T 2ux6_A 20 PASLKVAPGDTVTF--IPTDK-G-----HNVETIKGMIPDGA--EAFKSKINENYKVTF---TAPGVYGVKCTPHPF--- 83 (122)
T ss_dssp SSEEEECTTEEEEE--EESSS-S-----CCCEECTTCSCTTC--CCCBCCTTCCEEEEE---CSCEEEEEEETTEEE---
T ss_pred CCEEEECCCCEEEE--EECCC-C-----cEEEEcccccCCCc--ceeecCCCCEEEEEe---CCCEEEEEEeCCCcc---
Confidence 46899999998665 45522 3 44432211112221 124467999988888 468999999987432
Q ss_pred CceeeEEEecC
Q 007735 137 GGFGGFIINNR 147 (591)
Q Consensus 137 Gl~G~liV~~~ 147 (591)
|.|.|+|.+.
T Consensus 84 -M~G~I~V~~~ 93 (122)
T 2ux6_A 84 -MVGVVQVGDA 93 (122)
T ss_dssp -EEEEEEESSS
T ss_pred -CEEEEEEeCC
Confidence 9999999873
No 112
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.86 E-value=2.9e-05 Score=83.04 Aligned_cols=91 Identities=16% Similarity=0.238 Sum_probs=64.1
Q ss_pred eEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeE
Q 007735 46 QQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFF 125 (591)
Q Consensus 46 ~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~w 125 (591)
..+...+-.|-.+.|+|++||+|++.++|.-...-.+ ||..... -|+ ..-+.||++.++.|++ +++|+||
T Consensus 546 V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDVi--HSF~IPs----lGI---K~DaiPGrtnsvtFta-dkPGvY~ 615 (638)
T 3sbq_A 546 VYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVS--HGFVVVN----HGV---SMEISPQQTSSITFVA-DKPGLHW 615 (638)
T ss_dssp EEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCC--EEEEETT----TTE---EEEECTTCEEEEEEEC-CSCEEEE
T ss_pred EEEEEEcccccCCEEEEecCceeEEEEecCCcCCCce--eeeEecC----CCc---eeeeCCCCeEEEEEEc-CCCEEEE
Confidence 4555566677778999999999999999963211122 3322211 111 2458999999999998 7999999
Q ss_pred EecChh-hhhhcCceeeEEEec
Q 007735 126 YFPSLH-FQRASGGFGGFIINN 146 (591)
Q Consensus 126 YH~H~~-~q~~~Gl~G~liV~~ 146 (591)
|+|+.- ...-.+|.|.|+|++
T Consensus 616 y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 616 YYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp EECCSCCSTTCTTCEEEEEEEC
T ss_pred EECCCcCCCCcccceEEEEEec
Confidence 999942 222347999999986
No 113
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.84 E-value=7.6e-05 Score=65.16 Aligned_cols=91 Identities=13% Similarity=0.039 Sum_probs=58.5
Q ss_pred CCCCCcEEe-eCCCEEEEEEEECCCCC-----ce--eeecCcc-------CCCCCCC------CCCCC-CCCccCCCCcE
Q 007735 54 KFPGPTINV-TTNNNVVVNVRNKLDES-----LL--IHWSGIQ-------QRRSSWQ------DGLLG-TNCPIPPKWNW 111 (591)
Q Consensus 54 ~~pgP~i~v-~~Gd~v~v~v~N~l~~~-----~s--iH~HG~~-------~~~~~~~------DGv~~-tq~~I~PG~~~ 111 (591)
+|-...|.| ++||+|+|+++|.-..+ +. |--.|.. +.....+ |.--. ....|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 454458999 99999999999985432 32 2222211 0000011 11001 11248999999
Q ss_pred EEEEEeCC-ceee-eEEecChhhhhhcCceeeEEEe
Q 007735 112 TYQFQVKD-QVGS-FFYFPSLHFQRASGGFGGFIIN 145 (591)
Q Consensus 112 ~Y~f~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~liV~ 145 (591)
++.|+++. ++|+ |||.|..-.++. ||.|.|+|.
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 99999840 4666 999998777776 899999984
No 114
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.84 E-value=3e-05 Score=65.41 Aligned_cols=71 Identities=13% Similarity=0.080 Sum_probs=49.9
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.+.++.|+.|+|+ |.+...|.+|+|... .|. ..+ ++-.+.||+...+.| +.||.+
T Consensus 34 ~i~v~~Gd~V~~~--N~d~~~H~v~~~~~~-------~g~------~~~--------~~~~~~pG~~~~~tf--~~~G~y 88 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NREAMPHNVHFVAGV-------LGE------AAL--------KGPMMKKEQAYSLTF--TEAGTY 88 (105)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS------SCE--------ECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCEEEEEcCCC-------CCc------ccc--------cccccCCCCEEEEEe--CCCEEE
Confidence 4667889998885 777789999987521 110 001 112367887766555 899999
Q ss_pred eeecccccchhccceEEEEE
Q 007735 511 NLRTENLDSWYLGQETYVRV 530 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V 530 (591)
.|||++ |. ||...+.|
T Consensus 89 ~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 89 DYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999998 55 89888877
No 115
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.82 E-value=7e-05 Score=65.40 Aligned_cols=92 Identities=14% Similarity=0.096 Sum_probs=59.3
Q ss_pred CCCCCcEEe-eCCCEEEEEEEECCCCC-----ceeee--cC---------c----cCCCCCCCCCCCC-CCCccCCCCcE
Q 007735 54 KFPGPTINV-TTNNNVVVNVRNKLDES-----LLIHW--SG---------I----QQRRSSWQDGLLG-TNCPIPPKWNW 111 (591)
Q Consensus 54 ~~pgP~i~v-~~Gd~v~v~v~N~l~~~-----~siH~--HG---------~----~~~~~~~~DGv~~-tq~~I~PG~~~ 111 (591)
+|-...|.| +.||+|+|+++|.-..+ +.+-+ .+ + ...-.+..|.--. ..-.|.||+++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~ 92 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETD 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEE
Confidence 454558999 99999999999985432 22211 11 0 0000001121111 12358999999
Q ss_pred EEEEEeCC-ceee-eEEecChhhhhhcCceeeEEEec
Q 007735 112 TYQFQVKD-QVGS-FFYFPSLHFQRASGGFGGFIINN 146 (591)
Q Consensus 112 ~Y~f~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 146 (591)
++.|+++. ++|+ |+|.|..-.++. ||.|.|+|.+
T Consensus 93 ~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~~ 128 (128)
T 2iaa_C 93 SVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELGS 128 (128)
T ss_dssp EEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEeC
Confidence 99999841 5785 999998777776 8999999863
No 116
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.74 E-value=7.3e-05 Score=81.60 Aligned_cols=78 Identities=15% Similarity=0.160 Sum_probs=60.9
Q ss_pred EEEeccCCcEEEEEEecCCC---cceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCC
Q 007735 430 SVINGTYRGFMEVILQNNDT---KMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDN 506 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~---~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adN 506 (591)
+.+.++.|+.|+|.+.|.+. ..|.|+++++.+. ..+.||....+.|.++.
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~---------------------------~~i~PG~t~t~~Fta~~ 565 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA---------------------------MEIGPQMTSSVTFVAAN 565 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCS
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc---------------------------eeeCCCCeEEEEEECCC
Confidence 45678899999999999653 3899998875321 46788999999999999
Q ss_pred ccceeeeccccc-chhccceEEEEEecCC
Q 007735 507 VGIWNLRTENLD-SWYLGQETYVRVVNPE 534 (591)
Q Consensus 507 pG~W~~HCHil~-H~~~GM~~~~~V~~p~ 534 (591)
||.|.||||..- ..|.||...+.|..++
T Consensus 566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 999999999321 1345999999997653
No 117
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.52 E-value=0.00031 Score=63.49 Aligned_cols=82 Identities=10% Similarity=0.052 Sum_probs=58.9
Q ss_pred EEeccCCcEEEEEEecCC-CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceE-------EeCCCc--EEEE
Q 007735 431 VINGTYRGFMEVILQNND-TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTT-------QVYPGA--WTAI 500 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~-~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv-------~Vpp~g--~~~i 500 (591)
.+.++.|+.|.+++.|.+ ...|-|-++.. + ..+.. . |...+.+ .|.||+ ...+
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~-------~-~~~~~-----~----~~~~~~~~~~~~~~~i~PG~sgt~t~ 124 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGFGHSFDITKK-------G-PPYAV-----M----PVIDPIVAGTGFSPVPKDGKFGYTDF 124 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEESC-------C-SCCCS-----S----CCCCSEEEEBCCCCCCBTTBEEEEEE
T ss_pred EEEEeCCCEEEEEEEcCCCCeeeEEEEeec-------C-cchhc-----c----ccccccccccccccccCCCCceEEEE
Confidence 577899999999999974 55666655522 1 01100 0 1111221 567888 8899
Q ss_pred EEEeCCccceeeecccccchhccceEEEEE
Q 007735 501 LVSLDNVGIWNLRTENLDSWYLGQETYVRV 530 (591)
Q Consensus 501 rf~adNpG~W~~HCHil~H~~~GM~~~~~V 530 (591)
.|.+ .||.+.||||+--|...||-..+.|
T Consensus 125 tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 125 TWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp EECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred EEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 9999 9999999999988999999999887
No 118
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.17 E-value=0.001 Score=54.99 Aligned_cols=81 Identities=17% Similarity=0.098 Sum_probs=55.4
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..+.++.|+.|.|+ |.+...|.+.++... +.. .++. ..+..+...+.||....+.| +.||.
T Consensus 18 ~~i~v~~GdtV~~~--n~~~~~H~v~~~~~~----------~p~----g~~~-~~~~~~~~~~~~g~~~~~tf--~~~G~ 78 (98)
T 1iuz_A 18 SKISVAAGEAIEFV--NNAGFPHNIVFDEDA----------VPA----GVDA-DAISYDDYLNSKGETVVRKL--STPGV 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECTTS----------SCT----TCCH-HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCEEEEEeCCC----------Ccc----cccc-ccccccccccCCCCEEEEEc--CCCEE
Confidence 45778899998886 666678877665411 100 0000 00123456788898777766 89999
Q ss_pred eeeecccccchhccceEEEEEe
Q 007735 510 WNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V~ 531 (591)
+.|+|-+ |..+||-..+.|.
T Consensus 79 y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 79 YGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp EEEECTT--TGGGTCEEEEEEC
T ss_pred EEEEchh--hccCCCEEEEEEC
Confidence 9999998 8888999988873
No 119
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.16 E-value=0.00046 Score=59.75 Aligned_cols=75 Identities=12% Similarity=0.159 Sum_probs=51.2
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.++++.|++|+|+..+ ..|.+..+.. .+.. . .+.+.+.||....+.| +.||.|
T Consensus 23 ~i~V~~GDTV~f~n~~---~~Hnv~~~~~----------~~p~-g-----------~~~~~~~pg~t~s~TF--~~~G~y 75 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTD---KSHNAESVRE----------VWPE-G-----------VAPVKGGFSKEVVFNA--EKEGLY 75 (124)
T ss_dssp EEEECTTCEEEEECSS---SSCCCEECTT----------TSCT-T-----------SCCCBCCTTCCEEEEC--CSSEEE
T ss_pred EEEECCCCEEEEEECC---CCccEEEeCC----------cCCC-C-----------ccccccCCCCEEEEEe--CCCeEE
Confidence 4678899999998554 5676655421 1111 0 1122345677655555 899999
Q ss_pred eeecccccchhccceEEEEEecCC
Q 007735 511 NLRTENLDSWYLGQETYVRVVNPE 534 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~~p~ 534 (591)
.|||-. |..+||-..+.|.+|.
T Consensus 76 ~Y~C~~--H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 76 VLKCAP--HYGMGMVVLVQVGKPV 97 (124)
T ss_dssp EEECTT--TGGGTCEEEEEESSCT
T ss_pred EEEcCC--CCcCCCEEEEEECCCC
Confidence 999986 9999999999998764
No 120
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.09 E-value=0.0005 Score=59.83 Aligned_cols=75 Identities=11% Similarity=0.052 Sum_probs=49.6
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
..++++.|++|.|++.|. .|.+..+.. .+ ++.. ..+.+.||+...+.| +.||.
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~H~v~~~~~----------~~-P~g~-----------~~f~s~pGet~s~TF--~~pG~ 75 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---GHNSALMKG----------GA-PEGA-----------ETWKGKINEEITVTL--SKPGV 75 (127)
T ss_dssp SEEEECTTCEEEEECSSS---SCCCEECTT----------CS-CTTC-----------CCCBCCTTCCCEEEC--CSCEE
T ss_pred CEEEECCCCEEEEEECCC---CceEEEccC----------cC-CCCc-----------cceecCCCCEEEEEe--CCCeE
Confidence 346788899999987763 455544321 11 1100 111224676655444 89999
Q ss_pred eeeecccccchhccceEEEEEecC
Q 007735 510 WNLRTENLDSWYLGQETYVRVVNP 533 (591)
Q Consensus 510 W~~HCHil~H~~~GM~~~~~V~~p 533 (591)
|.|||-. |..+||-..+.|.++
T Consensus 76 y~y~C~~--H~~~GM~G~I~V~~~ 97 (127)
T 3tu6_A 76 YMYQCAP--HVGMGMIGAIVVGEP 97 (127)
T ss_dssp EEEECTT--TGGGTCEEEEEESSC
T ss_pred EEEEeCC--CCcCCcEEEEEECcC
Confidence 9999996 999999999999865
No 121
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.06 E-value=0.0026 Score=54.75 Aligned_cols=88 Identities=14% Similarity=0.161 Sum_probs=55.7
Q ss_pred CCCCCcEEeeC-CCEEEEEEEECCCC-------Cceeee---------cCccCC-CCC---CCCCCCC-CCCccCCCCcE
Q 007735 54 KFPGPTINVTT-NNNVVVNVRNKLDE-------SLLIHW---------SGIQQR-RSS---WQDGLLG-TNCPIPPKWNW 111 (591)
Q Consensus 54 ~~pgP~i~v~~-Gd~v~v~v~N~l~~-------~~siH~---------HG~~~~-~~~---~~DGv~~-tq~~I~PG~~~ 111 (591)
+|--..|.|+. |++|+++|+|.-.- +..|-- -|+..- ... ..|-... ...-|.||+++
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EEecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 45567899976 99999999999633 222211 111100 001 1122111 12348999999
Q ss_pred EEEEEeC--CceeeeEEecChhhhhhcCceeeEEEe
Q 007735 112 TYQFQVK--DQVGSFFYFPSLHFQRASGGFGGFIIN 145 (591)
Q Consensus 112 ~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 145 (591)
+..|+++ .++|+|.|.|. .++ ||.|.++|.
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 9999985 27999999999 555 899999884
No 122
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.03 E-value=0.0012 Score=55.47 Aligned_cols=71 Identities=13% Similarity=-0.039 Sum_probs=48.8
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.+.++.|+.|.|+ |.+...|.+++.... .+ . ..-++-.+.||....+.| +.||.+
T Consensus 35 ~i~V~~G~tV~~~--N~d~~~H~v~~~~~~-------~~----~----------~~~~s~~l~~g~~~~~tf--~~~G~y 89 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGEVMPHNVAFKKGI-------VG----E----------DAFRGEMMTKDQAYAITF--NEAGSY 89 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SS----S----------SCEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCcEEEEEeCCC-------CC----c----------ccccccccCCCCEEEEEe--CCCEEE
Confidence 4567889999887 777777877664321 00 0 001222456787776666 899999
Q ss_pred eeecccccchhccceEEEEE
Q 007735 511 NLRTENLDSWYLGQETYVRV 530 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V 530 (591)
.|+|-+ |. ||...+.|
T Consensus 90 ~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 90 DYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999998 65 99888877
No 123
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=96.97 E-value=0.0012 Score=57.02 Aligned_cols=73 Identities=8% Similarity=0.122 Sum_probs=49.9
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.++++.|++|.|++.|. .|.+..+. +.+. +.. +.+.+.||+...+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~----------~~~P-~g~-----------~~f~~~pg~t~s~TF--~~pG~y 74 (123)
T 3erx_A 22 FVRAEPGDVINFVPTDK---SHNVEAIK----------EILP-EGV-----------ESFKSKINESYTLTV--TEPGLY 74 (123)
T ss_dssp EEEECTTEEEEEEESST---TCCCEECT----------TSSC-TTC-----------CCCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEcC----------CcCC-CCc-----------cceecCCCCEEEEEe--CCCeEE
Confidence 46788999999998873 35554432 1110 100 111235677666555 899999
Q ss_pred eeecccccchhccceEEEEEec
Q 007735 511 NLRTENLDSWYLGQETYVRVVN 532 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~~ 532 (591)
.|+|-. |..+||-..+.|.+
T Consensus 75 ~y~C~~--H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 75 GVKCTP--HFGMGMVGLVQVGD 94 (123)
T ss_dssp EEECGG--GTTTTCEEEEEESS
T ss_pred EEEeCC--CCcCCcEEEEEECC
Confidence 999996 99999999999986
No 124
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.90 E-value=0.0017 Score=56.94 Aligned_cols=72 Identities=13% Similarity=-0.029 Sum_probs=50.0
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.+.++.|+.|+|+ |.+...|.+++.... .| . . .-++-.+.||+...+.| +.||.+
T Consensus 61 ~i~V~~GdtV~~~--N~d~~~H~v~~~~~~-------~g----~---------~-~~~s~~l~pG~t~~~tF--~~~G~y 115 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGEVMPHNVAFKKGI-------VG----E---------D-AFRGEMMTKDQAYAITF--NEAGSY 115 (132)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SS----S---------S-CEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCceEEEEeCCC-------CC----c---------c-cccccccCCCCEEEEEc--CCCEEE
Confidence 4677889999886 777778888764321 00 0 0 01223467888777666 899999
Q ss_pred eeecccccchhccceEEEEEe
Q 007735 511 NLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~ 531 (591)
.|||-+ |. ||...+.|.
T Consensus 116 ~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 116 DYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp EEECSS--CT--TCEEEEEEC
T ss_pred EEEeCC--Cc--CCEEEEEEC
Confidence 999998 65 999988873
No 125
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.51 E-value=0.013 Score=51.45 Aligned_cols=73 Identities=15% Similarity=0.261 Sum_probs=52.9
Q ss_pred CcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecCh---hhhh
Q 007735 58 PTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL---HFQR 134 (591)
Q Consensus 58 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~---~~q~ 134 (591)
..|.+..|++|++.++|. +.. |+..... -|. +.-+.||+.-++.|++ +++|+|+|+|.. ..+
T Consensus 60 ~~l~Vp~G~~V~~~vts~-DV~-----Hsf~ip~----~~~---k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H- 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSP-DVI-----HGFHVEG----TNI---NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH- 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBS-SSC-----EEEEETT----SSC---EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS-
T ss_pred CEEEEcCCCEEEEEEEeC-Ccc-----ceEEecC----CCc---eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc-
Confidence 489999999999999997 332 3433221 111 2346899988999997 789999999963 223
Q ss_pred hcCceeeEEEec
Q 007735 135 ASGGFGGFIINN 146 (591)
Q Consensus 135 ~~Gl~G~liV~~ 146 (591)
.+|.|.++|.+
T Consensus 125 -~~M~g~v~V~~ 135 (135)
T 2cua_A 125 -QNMFGTIVVKE 135 (135)
T ss_dssp -TTCEEEEEEEC
T ss_pred -CCCEEEEEEEC
Confidence 48999998863
No 126
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.08 E-value=0.021 Score=61.32 Aligned_cols=75 Identities=12% Similarity=0.056 Sum_probs=60.3
Q ss_pred EEEeccCCcEEEEEEecCC---CcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCC
Q 007735 430 SVINGTYRGFMEVILQNND---TKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDN 506 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~---~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adN 506 (591)
..+.++.|+.|+|++.|.+ +..|.|.+.+... -+.+.||....+.|.++.
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI---------------------------K~DaiPGrtnsvtFtadk 610 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV---------------------------SMEISPQQTSSITFVADK 610 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE---------------------------EEEECTTCEEEEEEECCS
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCc---------------------------eeeeCCCCeEEEEEEcCC
Confidence 4567899999999999974 5688887765432 125788899999999999
Q ss_pred ccceeeecccccch-hccceEEEEEe
Q 007735 507 VGIWNLRTENLDSW-YLGQETYVRVV 531 (591)
Q Consensus 507 pG~W~~HCHil~H~-~~GM~~~~~V~ 531 (591)
||.+.++|...-|. |.+|...+.|.
T Consensus 611 PGvY~y~CSE~CGa~Hs~M~G~ViVE 636 (638)
T 3sbq_A 611 PGLHWYYCSWFCHALHMEMVGRMMVE 636 (638)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEE
T ss_pred CEEEEEECCCcCCCCcccceEEEEEe
Confidence 99999999976554 67899988886
No 127
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.03 E-value=0.029 Score=50.91 Aligned_cols=81 Identities=15% Similarity=0.183 Sum_probs=57.5
Q ss_pred CCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecCh-
Q 007735 52 NGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL- 130 (591)
Q Consensus 52 Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~- 130 (591)
+-+|-...|.+..|++|++.++|. +..++...-++ | -+.-+.||+.-++.|++ +++|+|++.|..
T Consensus 87 ~~~f~Pn~l~VP~G~~Vr~~vTS~-DViHsf~IP~l---------g---ik~da~PG~~n~~~~~~-~kpG~y~g~Cse~ 152 (168)
T 3s8f_B 87 AFGYQPNPIEVPQGAEIVFKITSP-DVIHGFHVEGT---------N---INVEVLPGEVSTVRYTF-KRPGEYRIICNQY 152 (168)
T ss_dssp TTEEESSSEEEETTSEEEEEEECS-SSCEEEEETTS---------S---CEEEECTTBCEEEEEEC-CSCEEEEEECCSC
T ss_pred eceEecCEEEEeCCCeEEEEEecC-CceEEEEECCC---------C---eEEEecCCceeEEEEEe-CCCEEEEEECCcC
Confidence 334434689999999999999997 43333322221 1 12346799999999998 799999999983
Q ss_pred hhhhhcCceeeEEEec
Q 007735 131 HFQRASGGFGGFIINN 146 (591)
Q Consensus 131 ~~q~~~Gl~G~liV~~ 146 (591)
-...-.+|.|-++|++
T Consensus 153 CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 153 CGLGHQNMFGTIVVKE 168 (168)
T ss_dssp CSTTGGGCEEEEEEEC
T ss_pred CCCCcCCCEEEEEEeC
Confidence 3344457999999873
No 128
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=95.97 E-value=0.012 Score=50.87 Aligned_cols=74 Identities=8% Similarity=0.060 Sum_probs=47.3
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.+.++.|++|.|+..+. .|.+.++- +.. ++.... +.+.||....+ .++.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~----------~~~-p~~~~~-----------~~~~pG~t~~~--tF~~~G~y 74 (123)
T 1paz_A 22 YIKANPGDTVTFIPVDK---GHNVESIK----------DMI-PEGAEK-----------FKSKINENYVL--TVTQPGAY 74 (123)
T ss_dssp EEEECTTCEEEEEESSS---SCCCEECT----------TCS-CTTCCC-----------CBCCTTCCEEE--ECCSCEEE
T ss_pred EEEECCCCEEEEEECCC---CeEEEEec----------ccC-CCCccc-----------eecCCCCEEEE--EeCCCEEE
Confidence 46678899998876653 45554431 111 010001 11246665444 45899999
Q ss_pred eeecccccchhccceEEEEEecC
Q 007735 511 NLRTENLDSWYLGQETYVRVVNP 533 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~~p 533 (591)
.|+|-. |..+||-..+.|.++
T Consensus 75 ~y~C~~--H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 75 LVKCTP--HYAMGMIALIAVGDS 95 (123)
T ss_dssp EEECTT--TGGGTCEEEEEESSS
T ss_pred EEEeCC--cccCCCEEEEEEcCC
Confidence 999986 898999999999753
No 129
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=95.85 E-value=0.0095 Score=51.40 Aligned_cols=37 Identities=16% Similarity=0.336 Sum_probs=29.8
Q ss_pred CCCcEEEEEEEeCCccceeeecccccchhccceEEEEEecC
Q 007735 493 YPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNP 533 (591)
Q Consensus 493 pp~g~~~irf~adNpG~W~~HCHil~H~~~GM~~~~~V~~p 533 (591)
.||....+. ++.||.|.|+|-. |..+||-..+.|.++
T Consensus 59 ~pG~t~~~t--F~~~G~y~y~C~~--H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 59 TVGQEAVVK--FDKEGVYGFKCAP--HYMMGMVALVVVGDK 95 (123)
T ss_dssp CTTSCEEEE--CCSCEEEEEECST--TTTTTCEEEEEESSC
T ss_pred CCCCEEEEE--eCCCeEEEEEeCC--ccccCCEEEEEEcCC
Confidence 467765544 4899999999986 888999999999753
No 130
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.37 E-value=0.079 Score=46.33 Aligned_cols=72 Identities=14% Similarity=0.157 Sum_probs=51.4
Q ss_pred EeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCcccee
Q 007735 432 INGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWN 511 (591)
Q Consensus 432 ~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~ 511 (591)
+.++.|+.|+|++.|.+ ..|.| ++-+ + .--+.+.||....+.|.++.||.+.
T Consensus 62 l~Vp~G~~V~~~vts~D-V~Hsf-------~ip~-------------~-------~~k~d~~PG~~~~~~~~~~~~G~y~ 113 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD-VIHGF-------HVEG-------------T-------NINVEVLPGEVSTVRYTFKRPGEYR 113 (135)
T ss_dssp EEEETTSEEEEEEEBSS-SCEEE-------EETT-------------S-------SCEEEECBTBCEEEEEECCSCEEEE
T ss_pred EEEcCCCEEEEEEEeCC-ccceE-------EecC-------------C-------CceeEeCCCCcEEEEEEcCCCEEEE
Confidence 45778999999999874 55544 3311 0 1114567788788999999999999
Q ss_pred eeccccc-chhccceEEEEEe
Q 007735 512 LRTENLD-SWYLGQETYVRVV 531 (591)
Q Consensus 512 ~HCHil~-H~~~GM~~~~~V~ 531 (591)
++|..+- .-|.+|-..++|.
T Consensus 114 ~~C~e~CG~~H~~M~g~v~V~ 134 (135)
T 2cua_A 114 IICNQYCGLGHQNMFGTIVVK 134 (135)
T ss_dssp EECCSCCSTTSTTCEEEEEEE
T ss_pred EECcccCCCCcCCCEEEEEEE
Confidence 9996522 2456888888875
No 131
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=95.08 E-value=0.039 Score=50.07 Aligned_cols=91 Identities=13% Similarity=0.061 Sum_probs=59.4
Q ss_pred EEec-cCCcEEEEEEecCCCc-----ceeeeecCceEEEEEEcCCCCCCC-------CCCCCCC-CC-CCccceEEeCCC
Q 007735 431 VING-TYRGFMEVILQNNDTK-----MHAYHMSGYAFFVVGMDYGEWTDN-------SRGTYNK-WD-GIARTTTQVYPG 495 (591)
Q Consensus 431 v~~~-~~g~~ve~vl~N~~~~-----~HPfHlHG~~F~Vv~~g~g~~~~~-------~~~~~n~-~~-p~~rDTv~Vpp~ 495 (591)
.+++ +.|+.|.|+|.|.+.. .|-|-| ...+ .+... ....|-. .+ .....|..|.||
T Consensus 59 ~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi-------~~~~--~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pG 129 (167)
T 3ay2_A 59 DIQVSKACKEFTITLKHTGTQPKASMGHNLVI-------AKAE--DMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGG 129 (167)
T ss_dssp EEEEETTCSSEEEEEEECSCSCHHHHCBCCEE-------EEGG--GHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTT
T ss_pred eEEEecCCCEEEEEEEECCCCccccccceEEe-------ccCc--chhhhHHHhhhccccccccccccchhccceeeCCC
Confidence 4677 7899999999999765 365433 1111 00000 0000000 01 123456678999
Q ss_pred cEEEEEEEeC--CccceeeecccccchhccceEEEEEe
Q 007735 496 AWTAILVSLD--NVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 496 g~~~irf~ad--NpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
+...|.|.++ .||.+-|+|-+--|+. ||-..+.|.
T Consensus 130 et~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 130 EESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp CEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred CEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 9999999988 8999999999877877 898888885
No 132
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.01 E-value=0.034 Score=47.79 Aligned_cols=71 Identities=11% Similarity=0.069 Sum_probs=44.7
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.+.++.|++|.|+.. +. .|-++++. +.+... .. .+.+.+|....+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~n~--d~-~H~v~~~~----------~~~p~~-~~-----------~~~~~~g~t~~~tF--~~~G~y 74 (122)
T 2ux6_A 22 SLKVAPGDTVTFIPT--DK-GHNVETIK----------GMIPDG-AE-----------AFKSKINENYKVTF--TAPGVY 74 (122)
T ss_dssp EEEECTTEEEEEEES--SS-SCCCEECT----------TCSCTT-CC-----------CCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEEEC--CC-CcEEEEcc----------cccCCC-cc-----------eeecCCCCEEEEEe--CCCEEE
Confidence 467788999988744 33 56666543 111110 00 11224676655555 899999
Q ss_pred eeecccccchhccceEEEEEec
Q 007735 511 NLRTENLDSWYLGQETYVRVVN 532 (591)
Q Consensus 511 ~~HCHil~H~~~GM~~~~~V~~ 532 (591)
.|+|-+ |.. |-..+.|.+
T Consensus 75 ~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 75 GVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp EEEETT--EEE--EEEEEEESS
T ss_pred EEEeCC--Ccc--CEEEEEEeC
Confidence 999988 555 888888875
No 133
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=94.67 E-value=0.11 Score=45.09 Aligned_cols=94 Identities=7% Similarity=-0.003 Sum_probs=60.4
Q ss_pred EEEeccCC-cEEEEEEecCCCc-----ceeeeecCceEEEEEEcCC--C----CCCCCCCCCCC-CC-CCccceEEeCCC
Q 007735 430 SVINGTYR-GFMEVILQNNDTK-----MHAYHMSGYAFFVVGMDYG--E----WTDNSRGTYNK-WD-GIARTTTQVYPG 495 (591)
Q Consensus 430 ~v~~~~~g-~~ve~vl~N~~~~-----~HPfHlHG~~F~Vv~~g~g--~----~~~~~~~~~n~-~~-p~~rDTv~Vpp~ 495 (591)
..++++.| +.|.+++.|.+.. .|-|-| ...+.- . ........|-. .+ -....+..|.||
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi-------~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pG 90 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVL-------AKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGG 90 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEE-------EEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTT
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccceEE-------ecCcchhhhHHHhhhccccccccccccccceeeeeEECCC
Confidence 45678899 9999999998764 365543 221100 0 00000000100 01 122356678899
Q ss_pred cEEEEEEEeC---CccceeeecccccchhccceEEEEEe
Q 007735 496 AWTAILVSLD---NVGIWNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 496 g~~~irf~ad---NpG~W~~HCHil~H~~~GM~~~~~V~ 531 (591)
+...+.|.++ .||.+-|.|-+--|+. ||-..+.|.
T Consensus 91 et~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 91 EKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp CEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred CEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 9999999987 9999999998877877 898888885
No 134
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=93.98 E-value=0.31 Score=44.17 Aligned_cols=72 Identities=13% Similarity=0.173 Sum_probs=54.9
Q ss_pred EeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCcccee
Q 007735 432 INGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWN 511 (591)
Q Consensus 432 ~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W~ 511 (591)
+.++.|+.|++.+.|. +-.|.|-+=.. .=-+.+-||....+.|.++.||.+.
T Consensus 95 l~VP~G~~Vr~~vTS~-DViHsf~IP~l---------------------------gik~da~PG~~n~~~~~~~kpG~y~ 146 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP-DVIHGFHVEGT---------------------------NINVEVLPGEVSTVRYTFKRPGEYR 146 (168)
T ss_dssp EEEETTSEEEEEEECS-SSCEEEEETTS---------------------------SCEEEECTTBCEEEEEECCSCEEEE
T ss_pred EEEeCCCeEEEEEecC-CceEEEEECCC---------------------------CeEEEecCCceeEEEEEeCCCEEEE
Confidence 4567899999999997 56776655221 1123456788888999999999999
Q ss_pred eeccc-ccchhccceEEEEEe
Q 007735 512 LRTEN-LDSWYLGQETYVRVV 531 (591)
Q Consensus 512 ~HCHi-l~H~~~GM~~~~~V~ 531 (591)
+.|.. --+-|.+|...+.|.
T Consensus 147 g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 147 IICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EECCSCCSTTGGGCEEEEEEE
T ss_pred EECCcCCCCCcCCCEEEEEEe
Confidence 99985 456788999999886
No 135
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=92.45 E-value=0.39 Score=41.46 Aligned_cols=92 Identities=11% Similarity=0.081 Sum_probs=59.3
Q ss_pred EEEec-cCCcEEEEEEecCCCcc-----eeeeecCceEEEEEEcCCCCCC--------CCCCCCCC-CCC-CccceEEeC
Q 007735 430 SVING-TYRGFMEVILQNNDTKM-----HAYHMSGYAFFVVGMDYGEWTD--------NSRGTYNK-WDG-IARTTTQVY 493 (591)
Q Consensus 430 ~v~~~-~~g~~ve~vl~N~~~~~-----HPfHlHG~~F~Vv~~g~g~~~~--------~~~~~~n~-~~p-~~rDTv~Vp 493 (591)
..+.+ +.|+.|.+++.|.+..+ |-|-| ... +.... .....|-. .++ ....|..|.
T Consensus 17 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi--------~~~-~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~ 87 (128)
T 2iaa_C 17 KSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVV--------SKK-SDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIG 87 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSCSCHHHHCBCCEE--------EET-THHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBC
T ss_pred CEEEEecCCcEEEEEEEECCCCcccCCCceEEE--------ccc-cchhhHHHhhhhccccccccccccchhhccceeeC
Confidence 34667 77999999999987653 75543 221 00000 00000100 111 223455689
Q ss_pred CCcEEEEEEEeC--Cccc-eeeecccccchhccceEEEEEe
Q 007735 494 PGAWTAILVSLD--NVGI-WNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 494 p~g~~~irf~ad--NpG~-W~~HCHil~H~~~GM~~~~~V~ 531 (591)
||+...+.|.+. .||. +-|.|-+-.|+. ||-..+.|.
T Consensus 88 pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 88 GGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred CCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 999999999998 8995 999999877887 898888875
No 136
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=92.10 E-value=0.46 Score=41.02 Aligned_cols=92 Identities=11% Similarity=0.052 Sum_probs=58.9
Q ss_pred EEEec-cCCcEEEEEEecCCCc-----ceeeeecCceEEEEEEcCCCCCC--------CCCCCCCC-CCC-CccceEEeC
Q 007735 430 SVING-TYRGFMEVILQNNDTK-----MHAYHMSGYAFFVVGMDYGEWTD--------NSRGTYNK-WDG-IARTTTQVY 493 (591)
Q Consensus 430 ~v~~~-~~g~~ve~vl~N~~~~-----~HPfHlHG~~F~Vv~~g~g~~~~--------~~~~~~n~-~~p-~~rDTv~Vp 493 (591)
..+++ +.|+.|.+++.|.+.. .|-|-|- ..+ .... .....|-. .++ ....|..|.
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~-------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~ 88 (129)
T 2ccw_A 18 KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLT-------KDA--DKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIG 88 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEE-------EGG--GHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBC
T ss_pred ceEEEecCCCEEEEEEEECCCcccccCcceEEEc-------Ccc--chhhhHHHhhhhcccccccccccccceeeeeEEC
Confidence 34677 7799999999999765 3655432 111 0000 00000100 111 123455689
Q ss_pred CCcEEEEEEEeC--Cccc-eeeecccccchhccceEEEEEe
Q 007735 494 PGAWTAILVSLD--NVGI-WNLRTENLDSWYLGQETYVRVV 531 (591)
Q Consensus 494 p~g~~~irf~ad--NpG~-W~~HCHil~H~~~GM~~~~~V~ 531 (591)
||+...+.|.++ .||. +-|.|-+--|+. ||-..+.|.
T Consensus 89 pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 89 GGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred CCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 999999999998 8876 999998877877 898888874
No 137
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=92.07 E-value=0.43 Score=41.13 Aligned_cols=98 Identities=14% Similarity=0.065 Sum_probs=58.8
Q ss_pred EEEec-cCCcEEEEEEecCCCc-----ceeeeecCce-EEEEEEcCCCCCCCCCCCCCC-CCC-CccceEEeCCCcEEEE
Q 007735 430 SVING-TYRGFMEVILQNNDTK-----MHAYHMSGYA-FFVVGMDYGEWTDNSRGTYNK-WDG-IARTTTQVYPGAWTAI 500 (591)
Q Consensus 430 ~v~~~-~~g~~ve~vl~N~~~~-----~HPfHlHG~~-F~Vv~~g~g~~~~~~~~~~n~-~~p-~~rDTv~Vpp~g~~~i 500 (591)
..+.+ +.|+.|.+++.|.+.. .|-|-+-... ++-+.. .+ ........|-. .++ ....|-.|.||+...+
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~-~~-m~~~~~~~~~~~~~~~~~~~t~~l~pGet~sv 95 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIAT-DG-LSAGIDKQYLKDGDARVIAHTKVIGAGEKDSV 95 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHH-HH-TTTCGGGTTSCTTCTTEEEECCCBCTTCEEEE
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHH-HH-hhccccccccccccchhheeeeeeCCCCEEEE
Confidence 44677 7899999999998765 3755442110 000000 00 00000000100 111 2234556899999999
Q ss_pred EEEeC--Cccc-eeeecccccchhccceEEEEE
Q 007735 501 LVSLD--NVGI-WNLRTENLDSWYLGQETYVRV 530 (591)
Q Consensus 501 rf~ad--NpG~-W~~HCHil~H~~~GM~~~~~V 530 (591)
.|.+. .||. +-|.|-+--|+. ||-..+.|
T Consensus 96 tf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 96 TFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp EEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred EEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 99998 7887 999999877887 88888877
No 138
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=91.81 E-value=0.97 Score=38.64 Aligned_cols=88 Identities=9% Similarity=0.037 Sum_probs=57.7
Q ss_pred EEEeccC-CcEEEEEEecCCCc-----ceeeeecCceEEEEEEcCCCCCC----C---C-CCCCC--CCCCCccceEEeC
Q 007735 430 SVINGTY-RGFMEVILQNNDTK-----MHAYHMSGYAFFVVGMDYGEWTD----N---S-RGTYN--KWDGIARTTTQVY 493 (591)
Q Consensus 430 ~v~~~~~-g~~ve~vl~N~~~~-----~HPfHlHG~~F~Vv~~g~g~~~~----~---~-~~~~n--~~~p~~rDTv~Vp 493 (591)
.-+.++. |+.|.++|.|.+.. .|-| ||+.... ... . . ...|- -+..+...|..|.
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~--------Vl~~~~~-~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~ 88 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNLPKNVMGHNW--------VLSTAAD-MQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIG 88 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSCCHHHHCBCC--------EEEEHHH-HHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBC
T ss_pred CEEEEecCCCEEEEEEEECCcccccccCceE--------EEcccch-HHHHHHHHHhcChhhccCCCCCccceeccceeC
Confidence 4567765 99999999999855 4643 4443210 000 0 0 00111 1123556777899
Q ss_pred CCcEEEEEEEeC---CccceeeecccccchhccceEEEEE
Q 007735 494 PGAWTAILVSLD---NVGIWNLRTENLDSWYLGQETYVRV 530 (591)
Q Consensus 494 p~g~~~irf~ad---NpG~W~~HCHil~H~~~GM~~~~~V 530 (591)
||+...+.|.+. .||.+-|-|- .|+ ||-..+.|
T Consensus 89 pGes~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 89 SGEKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp TTCEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred CCcEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 999999999987 8999999999 588 89888877
No 139
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=79.16 E-value=3.8 Score=38.07 Aligned_cols=78 Identities=13% Similarity=0.112 Sum_probs=55.2
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
+.+.++.|+.|++.|.+. +..|.| +|-+. +=-+.+-||....+.|.++.||.
T Consensus 41 n~l~lP~g~~V~~~lTS~-DViHSF-------~IP~l--------------------gvK~daiPGr~n~l~~~~~~pG~ 92 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSN-SVMHSF-------FIPRL--------------------GSQIYAMAGMQTRLHLIANEPGT 92 (205)
T ss_dssp SEEEEETTSCEEEEEEES-SSCEEE-------EEGGG--------------------TEEEEECTTCCEEEEECCSSSEE
T ss_pred ceEEEeCCCEEEEEEecC-CceeeE-------Eeccc--------------------CcEEEecCCceEEEEEEeCCCeE
Confidence 346778899999999987 356654 44221 11123456777888899999999
Q ss_pred eeeecccccch-hccceEEEEEe-cCCC
Q 007735 510 WNLRTENLDSW-YLGQETYVRVV-NPEA 535 (591)
Q Consensus 510 W~~HCHil~H~-~~GM~~~~~V~-~p~~ 535 (591)
+...|-.+-.. |..|-..++|+ ++++
T Consensus 93 y~g~CsE~CG~~Hs~M~~~v~vv~~~~~ 120 (205)
T 1cyx_A 93 YDGICAEICGPGHSGMKFKAIATPDRAA 120 (205)
T ss_dssp EEEEECSCCSTTSTTCCEEEEEESSHHH
T ss_pred EEEEcccccccchhhceEEEEEECCHHH
Confidence 99999865444 77788888888 5543
No 140
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=74.56 E-value=5.4 Score=39.41 Aligned_cols=78 Identities=15% Similarity=0.196 Sum_probs=57.9
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
+.+.++.|+.|++.+.+. +-.|.|.+=.. +--+.+-||....+.|.++.||.
T Consensus 189 N~lvlP~g~~V~~~ltS~-DViHsf~iP~l---------------------------g~k~daiPG~~n~~~~~~~~~G~ 240 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTAT-DVIHAWTIPAF---------------------------AVKQDAVPGRIAQLWFSVDQEGV 240 (298)
T ss_dssp SCEEEESSSEEEEEEEES-SSCEEEEEGGG---------------------------TEEEEECTTCCEEEEEECSSSEE
T ss_pred ceEEEEcCCEEEEEEEeC-CccceeeEccc---------------------------CceEEecCCceEEEEEEeCCCEE
Confidence 346778999999999986 46776655222 12233457777788999999999
Q ss_pred eeeecccc-cchhccceEEEEEecCCC
Q 007735 510 WNLRTENL-DSWYLGQETYVRVVNPEA 535 (591)
Q Consensus 510 W~~HCHil-~H~~~GM~~~~~V~~p~~ 535 (591)
+...|..+ -.-|..|-..++|+++++
T Consensus 241 y~g~CsE~CG~~Hs~M~~~v~vvs~~~ 267 (298)
T 3hb3_B 241 YFGQCSELCGINHAYMPIVVKAVSQEK 267 (298)
T ss_dssp EEECCCSCCSTTTTSCCEEEEEECHHH
T ss_pred EEEEcccccCcCccCCeeEEEEEcHHH
Confidence 99999954 345888888899987764
No 141
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=73.59 E-value=24 Score=29.72 Aligned_cols=72 Identities=14% Similarity=0.344 Sum_probs=50.8
Q ss_pred cCCEE--EEEEeEeCCcceEEEEEe-CCe--eEEEeecCCcee--------eeeeeEEEEccccEEEEEEEeCC--CCCc
Q 007735 220 PGKTY--RIRVHNVGISTSLNFRIQ-NHN--LLLAETEGSYTV--------QQNYTSLDIHVGQSYSFLVTMDQ--NAST 284 (591)
Q Consensus 220 ~G~~~--rlRliN~~~~~~~~~~i~-gh~--~~via~DG~~~~--------p~~~d~v~i~pGqR~dvlv~~~~--~~g~ 284 (591)
.|+.+ .|.+.|.+.. ...+.+. |+. |.|...+|..+- .+......|.||+...+-.+.++ .+|
T Consensus 16 ~g~~v~~~ltv~N~s~~-~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG- 93 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSER-AIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPG- 93 (120)
T ss_dssp CSSCEEEEEEEEECSSS-CEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSE-
T ss_pred CCCeEEEEEEEEcCCCC-cEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCc-
Confidence 55554 6788898866 5666664 554 455555676552 23457899999999999999985 357
Q ss_pred ceEEEEeec
Q 007735 285 DYYIVASAR 293 (591)
Q Consensus 285 ~y~i~~~~~ 293 (591)
.|.+.+...
T Consensus 94 ~Ytl~a~l~ 102 (120)
T 3isy_A 94 TYEVKVTFK 102 (120)
T ss_dssp EEEEEEEEC
T ss_pred cEEEEEEEE
Confidence 999988654
No 142
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=65.54 E-value=13 Score=35.90 Aligned_cols=78 Identities=15% Similarity=0.208 Sum_probs=56.0
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
+.+.++.|+.|++.+.+. +-.|.|-+=... +..| +-||....+.|.++.||.
T Consensus 171 n~l~lP~g~~v~~~~tS~-DViHsf~ip~l~------------------------~k~d---a~PG~~n~~~~~~~~~G~ 222 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA-DVIHSWTVPAFG------------------------VKQD---AVPGRLAQLWFRAEREGI 222 (262)
T ss_dssp SCEEEETTSEEEEEEEES-SSCEEEEEGGGT------------------------EEEE---ECBTCCEEEEEECCSCEE
T ss_pred ceEEEecCCEEEEEEEEC-cccceeeecccC------------------------ceEE---ecCCceeEEEEecCCcEE
Confidence 346778999999999987 456655443221 1133 456777788899999999
Q ss_pred eeeeccccc-chhccceEEEEEecCCC
Q 007735 510 WNLRTENLD-SWYLGQETYVRVVNPEA 535 (591)
Q Consensus 510 W~~HCHil~-H~~~GM~~~~~V~~p~~ 535 (591)
+...|-.+- .-|..|-..++|+++++
T Consensus 223 y~g~Cse~CG~~H~~M~~~v~vv~~~~ 249 (262)
T 2gsm_B 223 FFGQCSELCGISHAYMPITVKVVSEEA 249 (262)
T ss_dssp EEECCCSCCSTTGGGCCEEEEEECHHH
T ss_pred EEEEChHhcccCcccCeEEEEEEcHHH
Confidence 999998544 34788888888887653
No 143
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=64.35 E-value=63 Score=27.07 Aligned_cols=75 Identities=8% Similarity=0.061 Sum_probs=49.0
Q ss_pred eeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCC----CccCCCCcEEEEEEeCC
Q 007735 44 VPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTN----CPIPPKWNWTYQFQVKD 119 (591)
Q Consensus 44 ~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq----~~I~PG~~~~Y~f~~~~ 119 (591)
....+...|-.-=.=+|+...|.+..+.|.+.-.+ ..| -|+||-..+| ..|+||++.+|+...++
T Consensus 20 v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~---~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~ 88 (120)
T 3isy_A 20 IKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHK---ERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKE 88 (120)
T ss_dssp EEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCC---EEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESS
T ss_pred EEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCC---EEE--------EccccchhhhhhceEEECCCCEEEEEEEeCC
Confidence 33344444544333477888888888888875211 111 2588876554 44999999999999973
Q ss_pred --ceeeeEEecC
Q 007735 120 --QVGSFFYFPS 129 (591)
Q Consensus 120 --~~Gt~wYH~H 129 (591)
.+|+|..+.-
T Consensus 89 ~~~pG~Ytl~a~ 100 (120)
T 3isy_A 89 VPEPGTYEVKVT 100 (120)
T ss_dssp CCCSEEEEEEEE
T ss_pred CCCCccEEEEEE
Confidence 4799987644
No 144
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=58.70 E-value=26 Score=29.10 Aligned_cols=46 Identities=13% Similarity=0.330 Sum_probs=31.0
Q ss_pred EEEEEEeEeCCc-ceEEEEEeCC-eeEEEeecCCceeeeeeeEEEEccccEEEEEEEe
Q 007735 223 TYRIRVHNVGIS-TSLNFRIQNH-NLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTM 278 (591)
Q Consensus 223 ~~rlRliN~~~~-~~~~~~i~gh-~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~ 278 (591)
.|+|||+|.+.. ..+.++++|. .+++++ + ..+.+.||+..++-|..
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-------~---~~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWYG-------K---QTIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEES-------C---CEEEECTTCEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEeC-------C---CcEEECCCCEEEEEEEE
Confidence 699999999976 4566777774 233322 1 13899999977766544
No 145
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=57.50 E-value=23 Score=32.80 Aligned_cols=74 Identities=12% Similarity=-0.002 Sum_probs=51.1
Q ss_pred CcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecCh-hhhhhc
Q 007735 58 PTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL-HFQRAS 136 (591)
Q Consensus 58 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~-~~q~~~ 136 (591)
..|.+..|+.|++.+++. +.-++...-.+ +-+.-+-||..-...|.+ +++|+|+..|.. -...-+
T Consensus 41 n~l~lP~g~~V~~~lTS~-DViHSF~IP~l------------gvK~daiPGr~n~l~~~~-~~pG~y~g~CsE~CG~~Hs 106 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSN-SVMHSFFIPRL------------GSQIYAMAGMQTRLHLIA-NEPGTYDGICAEICGPGHS 106 (205)
T ss_dssp SEEEEETTSCEEEEEEES-SSCEEEEEGGG------------TEEEEECTTCCEEEEECC-SSSEEEEEEECSCCSTTST
T ss_pred ceEEEeCCCEEEEEEecC-CceeeEEeccc------------CcEEEecCCceEEEEEEe-CCCeEEEEEcccccccchh
Confidence 369999999999999997 22222222211 112446788888888987 799999999983 223334
Q ss_pred CceeeEEEe
Q 007735 137 GGFGGFIIN 145 (591)
Q Consensus 137 Gl~G~liV~ 145 (591)
.|.+.++|.
T Consensus 107 ~M~~~v~vv 115 (205)
T 1cyx_A 107 GMKFKAIAT 115 (205)
T ss_dssp TCCEEEEEE
T ss_pred hceEEEEEE
Confidence 577888877
No 146
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=56.88 E-value=15 Score=34.79 Aligned_cols=77 Identities=6% Similarity=0.109 Sum_probs=54.5
Q ss_pred EEEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccc
Q 007735 430 SVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGI 509 (591)
Q Consensus 430 ~v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~ 509 (591)
+.+.++.|+.|++.+.+. +-.|.|-+=... +..| .-||..-.+.|.++.||.
T Consensus 140 n~lvlP~~~~Vr~~vtS~-DViHsf~vP~lg------------------------~K~D---aiPGr~n~~~~~~~~~G~ 191 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSE-DVLHSWAVPSLG------------------------LKTD---AIPGRLNQTTLMSSRPGL 191 (227)
T ss_dssp SCEEEETTSCEEEEEEES-SSCEEEEEGGGT------------------------EEEE---ECTTCCEEEEECCSSCEE
T ss_pred ceEEEecCCEEEEEEEeC-cccceeeecccC------------------------cEEE---ecCCceEEEEEecCCcEE
Confidence 446678899999999986 456655442211 1234 356777778899999999
Q ss_pred eeeecccccc-hhccceEEEEEecCC
Q 007735 510 WNLRTENLDS-WYLGQETYVRVVNPE 534 (591)
Q Consensus 510 W~~HCHil~H-~~~GM~~~~~V~~p~ 534 (591)
+...|.-+-. -|..|-..++|++++
T Consensus 192 y~g~Cse~CG~~Hs~M~~~v~vv~~~ 217 (227)
T 1v54_B 192 YYGQCSEICGSNHSFMPIVLELVPLK 217 (227)
T ss_dssp EEECCCSCCSTTGGGCCEEEEEECHH
T ss_pred EEEEehhhcccccccCeEEEEEEcHH
Confidence 9999985444 477778888888765
No 147
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=47.41 E-value=19 Score=35.81 Aligned_cols=77 Identities=10% Similarity=0.101 Sum_probs=53.8
Q ss_pred EEeccCCcEEEEEEecCCCcceeeeecCceEEEEEEcCCCCCCCCCCCCCCCCCCccceEEeCCCcEEEEEEEeCCccce
Q 007735 431 VINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 510 (591)
Q Consensus 431 v~~~~~g~~ve~vl~N~~~~~HPfHlHG~~F~Vv~~g~g~~~~~~~~~~n~~~p~~rDTv~Vpp~g~~~irf~adNpG~W 510 (591)
.+.++.|+.|++.+.+. +-.|.|.+=.. +=-+.+-||-...+.|.++.||.+
T Consensus 152 ~l~lP~g~~V~~~lTS~-DViHsf~IP~l---------------------------g~k~DaiPGr~n~~~~~~~~~G~y 203 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSN-SVMNSFFIPRL---------------------------GSQIYAMAGMQTRLHLIANEPGTY 203 (315)
T ss_dssp BCCCCSSSEEEEEECBS-SSCEEEEEGGG---------------------------TEEEEECBTSCEEEEEECCSCBCC
T ss_pred eEEEeCCCEEEEEEEeC-Cccceeeeccc---------------------------CcEEeecCCcceeeEEecCCCeEE
Confidence 45678899999999876 35665544222 112234567777888999999999
Q ss_pred eeecccccc-hhccceEEEEEe-cCCC
Q 007735 511 NLRTENLDS-WYLGQETYVRVV-NPEA 535 (591)
Q Consensus 511 ~~HCHil~H-~~~GM~~~~~V~-~p~~ 535 (591)
...|-.+-. -|..|-..++|+ ++++
T Consensus 204 ~g~CsE~CG~~Hs~M~~~v~vv~~~~~ 230 (315)
T 1fft_B 204 DGISASYSGPGFSGMKFKAIATPDRAA 230 (315)
T ss_dssp EEBCCSCCSTTTTTCCEECCBCSSTHH
T ss_pred EEeccccchhhHHhccceEEEecCHHH
Confidence 999986444 477777888887 5543
No 148
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=44.15 E-value=18 Score=30.83 Aligned_cols=47 Identities=15% Similarity=0.222 Sum_probs=29.2
Q ss_pred EEEEEECCCCCc---eeeecCccCCC---CCCCCCCCCCCCccCCCCcEEEEE
Q 007735 69 VVNVRNKLDESL---LIHWSGIQQRR---SSWQDGLLGTNCPIPPKWNWTYQF 115 (591)
Q Consensus 69 ~v~v~N~l~~~~---siH~HG~~~~~---~~~~DGv~~tq~~I~PG~~~~Y~f 115 (591)
.|++.|.-+.+. +=||.=.+-.+ ...-+||-|.|.-|.||++|+|.=
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtS 86 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYTS 86 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEEEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEeC
Confidence 466677765543 34666322111 113477777777899999998873
No 149
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=43.05 E-value=44 Score=32.16 Aligned_cols=76 Identities=17% Similarity=0.011 Sum_probs=50.4
Q ss_pred CcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecCh-hhhhhc
Q 007735 58 PTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL-HFQRAS 136 (591)
Q Consensus 58 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~-~~q~~~ 136 (591)
..|.+..|+.|++.+++. +.-++.....+. -+.-+-||..-...|++ +++|+|+..|.. -...-+
T Consensus 171 n~l~lP~g~~v~~~~tS~-DViHsf~ip~l~------------~k~da~PG~~n~~~~~~-~~~G~y~g~Cse~CG~~H~ 236 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA-DVIHSWTVPAFG------------VKQDAVPGRLAQLWFRA-EREGIFFGQCSELCGISHA 236 (262)
T ss_dssp SCEEEETTSEEEEEEEES-SSCEEEEEGGGT------------EEEEECBTCCEEEEEEC-CSCEEEEECCCSCCSTTGG
T ss_pred ceEEEecCCEEEEEEEEC-cccceeeecccC------------ceEEecCCceeEEEEec-CCcEEEEEEChHhcccCcc
Confidence 469999999999999987 333233222221 12335678888888887 799999999983 222223
Q ss_pred CceeeEEEecC
Q 007735 137 GGFGGFIINNR 147 (591)
Q Consensus 137 Gl~G~liV~~~ 147 (591)
.|.+.+.|.++
T Consensus 237 ~M~~~v~vv~~ 247 (262)
T 2gsm_B 237 YMPITVKVVSE 247 (262)
T ss_dssp GCCEEEEEECH
T ss_pred cCeEEEEEEcH
Confidence 47777776653
No 150
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=43.02 E-value=48 Score=32.55 Aligned_cols=77 Identities=17% Similarity=-0.000 Sum_probs=51.5
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecCh-hhhhh
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL-HFQRA 135 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~-~~q~~ 135 (591)
...|.+..|+.|++.+++. +.-++.....+ +-+.-.-||..-+..|++ +++|+|+..|.. -...-
T Consensus 188 dN~lvlP~g~~V~~~ltS~-DViHsf~iP~l------------g~k~daiPG~~n~~~~~~-~~~G~y~g~CsE~CG~~H 253 (298)
T 3hb3_B 188 DNPVVVPVGKKVLVQVTAT-DVIHAWTIPAF------------AVKQDAVPGRIAQLWFSV-DQEGVYFGQCSELCGINH 253 (298)
T ss_dssp SSCEEEESSSEEEEEEEES-SSCEEEEEGGG------------TEEEEECTTCCEEEEEEC-SSSEEEEECCCSCCSTTT
T ss_pred cceEEEEcCCEEEEEEEeC-CccceeeEccc------------CceEEecCCceEEEEEEe-CCCEEEEEEcccccCcCc
Confidence 3579999999999999996 22222222211 112335678888888987 799999999993 23333
Q ss_pred cCceeeEEEecC
Q 007735 136 SGGFGGFIINNR 147 (591)
Q Consensus 136 ~Gl~G~liV~~~ 147 (591)
+.|.+.+.+.++
T Consensus 254 s~M~~~v~vvs~ 265 (298)
T 3hb3_B 254 AYMPIVVKAVSQ 265 (298)
T ss_dssp TSCCEEEEEECH
T ss_pred cCCeeEEEEEcH
Confidence 457777777753
No 151
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=40.40 E-value=18 Score=30.68 Aligned_cols=55 Identities=18% Similarity=0.304 Sum_probs=32.2
Q ss_pred EEEEEECCCCCc---eeeecCccCCC---CCCCCCCCCCCCccCCCCcEEEEEEe--CCceee
Q 007735 69 VVNVRNKLDESL---LIHWSGIQQRR---SSWQDGLLGTNCPIPPKWNWTYQFQV--KDQVGS 123 (591)
Q Consensus 69 ~v~v~N~l~~~~---siH~HG~~~~~---~~~~DGv~~tq~~I~PG~~~~Y~f~~--~~~~Gt 123 (591)
.|++.|.-+.+. +=||.=.+-.+ ...-+||-|.|.-|.||++|+|.=-. ....|+
T Consensus 33 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtSg~~L~tp~G~ 95 (126)
T 1xvs_A 33 LITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSSGTALDTPVGV 95 (126)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEEEEEEESSSEEE
T ss_pred EEEEEECCCCCEEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEeCCcCcCCCcEE
Confidence 466667765543 34665322111 11246777777789999999887433 234554
No 152
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=40.24 E-value=46 Score=33.35 Aligned_cols=70 Identities=17% Similarity=0.346 Sum_probs=40.7
Q ss_pred eeeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCce--------eeecC--ccCCCCCCCC------CCCC-CCCccC
Q 007735 44 VPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLL--------IHWSG--IQQRRSSWQD------GLLG-TNCPIP 106 (591)
Q Consensus 44 ~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~s--------iH~HG--~~~~~~~~~D------Gv~~-tq~~I~ 106 (591)
++.++..-|=+.||-++++ .++|+|+-+++.. ++|=. +..-...+-| |.-. .+.||+
T Consensus 250 V~~~v~~A~Y~vpgR~l~~------~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~pI~ 323 (382)
T 1yew_A 250 VSVKVEDATYRVPGRAMRM------KLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSPLA 323 (382)
T ss_dssp EEEEEEEEEEESSCSEEEE------EEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSCBC
T ss_pred eEEEeeccEEecCCcEEEE------EEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCCcC
Confidence 3445555555677777754 5788888776543 33321 1111111222 3223 357899
Q ss_pred CCCcEEEEEEeCC
Q 007735 107 PKWNWTYQFQVKD 119 (591)
Q Consensus 107 PG~~~~Y~f~~~~ 119 (591)
|||+.+.+.++.|
T Consensus 324 PGETr~~~v~a~d 336 (382)
T 1yew_A 324 PGETRTVDVTASD 336 (382)
T ss_dssp TTCEEEEEEEEEC
T ss_pred CCceeEEEEEeeh
Confidence 9999999999854
No 153
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=39.89 E-value=35 Score=28.94 Aligned_cols=69 Identities=7% Similarity=0.127 Sum_probs=38.1
Q ss_pred EECCCCCCCcEEeeCCCEEEEEEEECCCC---Cc--eee--ecCccCCC-CCCCCCCCCCCCccCCCCcEEEEEEeC
Q 007735 50 AINGKFPGPTINVTTNNNVVVNVRNKLDE---SL--LIH--WSGIQQRR-SSWQDGLLGTNCPIPPKWNWTYQFQVK 118 (591)
Q Consensus 50 ~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~---~~--siH--~HG~~~~~-~~~~DGv~~tq~~I~PG~~~~Y~f~~~ 118 (591)
.++|=-+.+.=.+..|..+.+.+.=..++ .. .+| ..|+..+- ....|+=-++.|||.+|+.++|.+..+
T Consensus 17 ~V~~C~~~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~~~CPl~~G~~~~y~~~~~ 93 (129)
T 1xwv_A 17 MVDGCHGSDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHFMKCPLVKGQQYDAKYTWN 93 (129)
T ss_dssp EETTCCBTSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGTSCSSBCTTCEEEEEEEEE
T ss_pred EECCCCCCCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCCccCcccCCEEEEEEEEeE
Confidence 44442134455677888877777622222 11 222 23444321 112333323679999999999997774
No 154
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=39.31 E-value=62 Score=32.78 Aligned_cols=68 Identities=18% Similarity=0.287 Sum_probs=39.0
Q ss_pred eeEEEEECCCCCCCcEEeeCCCEEEEEEEECCCCCce--------eeecCccC--CCCCCCC------CCCCCCCccCCC
Q 007735 45 PQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDESLL--------IHWSGIQQ--RRSSWQD------GLLGTNCPIPPK 108 (591)
Q Consensus 45 ~~~~~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~~~~s--------iH~HG~~~--~~~~~~D------Gv~~tq~~I~PG 108 (591)
+.++..-+=+.||-++++ .++|+|+-+++.. ++|=.-.. ..+.+.| |.. ++.||+||
T Consensus 285 ~~~v~~A~Y~vpgR~l~~------~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~pI~PG 357 (419)
T 3rfr_A 285 TTELNGGVYKVPGRELTI------NVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDDVIAPG 357 (419)
T ss_dssp EEEEEEEEEESSSSEEEE------EEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCCCBCTT
T ss_pred EEEEeceEEecCCcEEEE------EEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCCCcCCC
Confidence 345555555667766654 4778888776543 23222111 0111122 433 44499999
Q ss_pred CcEEEEEEeCC
Q 007735 109 WNWTYQFQVKD 119 (591)
Q Consensus 109 ~~~~Y~f~~~~ 119 (591)
|+.+...++.|
T Consensus 358 ETrt~~V~a~d 368 (419)
T 3rfr_A 358 ESKEIVVKIQD 368 (419)
T ss_dssp CEEEEEEEEEC
T ss_pred cceEEEEEeeh
Confidence 99999999854
No 155
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=38.50 E-value=25 Score=30.43 Aligned_cols=55 Identities=16% Similarity=0.269 Sum_probs=32.2
Q ss_pred EEEEEECCCCCc---eeeecCccCCC---CCCCCCCCCCCCccCCCCcEEEEEEe--CCceee
Q 007735 69 VVNVRNKLDESL---LIHWSGIQQRR---SSWQDGLLGTNCPIPPKWNWTYQFQV--KDQVGS 123 (591)
Q Consensus 69 ~v~v~N~l~~~~---siH~HG~~~~~---~~~~DGv~~tq~~I~PG~~~~Y~f~~--~~~~Gt 123 (591)
.|++.|.-+.+. +=||.=.+-.+ ...-+||.|.|.-|.||++|+|.=-. ..+.|+
T Consensus 38 ~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVGeqPvL~PGe~F~YtSg~~L~Tp~G~ 100 (139)
T 1xq4_A 38 TVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVGQQPLLAPGETFEYTSGCPLPTPIGT 100 (139)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEESSSSCCCEECTTCEEEEEEEEEESSSEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEcCCcCcCCCceE
Confidence 466677765543 34665322111 11246777777889999999887433 234554
No 156
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=38.19 E-value=35 Score=28.97 Aligned_cols=69 Identities=20% Similarity=0.271 Sum_probs=38.8
Q ss_pred EEECCCCCCCcEEeeCCCEEEEEEEECCC---CCceeee----cCccCC-CCCCCCCCC-CCCCccCCCCcEEEEEEeC
Q 007735 49 IAINGKFPGPTINVTTNNNVVVNVRNKLD---ESLLIHW----SGIQQR-RSSWQDGLL-GTNCPIPPKWNWTYQFQVK 118 (591)
Q Consensus 49 ~~~Ng~~pgP~i~v~~Gd~v~v~v~N~l~---~~~siH~----HG~~~~-~~~~~DGv~-~tq~~I~PG~~~~Y~f~~~ 118 (591)
..++|= +.+.=.+..|..+.+.+.=..+ ....... .|+..+ .....|+=. ++.|||.+|+.++|.+.++
T Consensus 18 V~V~~C-~~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 18 VNVSPC-PTQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp EEEESC-SSSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred EEECCC-CCCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 344543 2355667778877777762222 2222222 233331 112245543 3679999999999998875
No 157
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=34.33 E-value=22 Score=30.56 Aligned_cols=55 Identities=18% Similarity=0.331 Sum_probs=31.9
Q ss_pred EEEEEECCCCCc---eeeecCccCCC---CCCCCCCCCCCCccCCCCcEEEEEEe--CCceee
Q 007735 69 VVNVRNKLDESL---LIHWSGIQQRR---SSWQDGLLGTNCPIPPKWNWTYQFQV--KDQVGS 123 (591)
Q Consensus 69 ~v~v~N~l~~~~---siH~HG~~~~~---~~~~DGv~~tq~~I~PG~~~~Y~f~~--~~~~Gt 123 (591)
.|++.|.-+.+. +=||.=.+-.+ ...-+||.|.|.-|.||++|+|.=-. ..+.|+
T Consensus 33 ~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~YtSg~~L~Tp~G~ 95 (134)
T 1tza_A 33 TITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYTSGTVLDTPFGI 95 (134)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEEEEEEEEESSSEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceEEcCCcCcCCCceE
Confidence 466677765543 34665222111 11246777777789999999887433 234554
No 158
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=33.37 E-value=40 Score=28.11 Aligned_cols=35 Identities=9% Similarity=0.188 Sum_probs=28.4
Q ss_pred EEEEeCCceeeeEEecChhhhhhcCceeeE-EEecCC
Q 007735 113 YQFQVKDQVGSFFYFPSLHFQRASGGFGGF-IINNRA 148 (591)
Q Consensus 113 Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~l-iV~~~~ 148 (591)
..+++ +.+|++||-|-...+=..||...| .|....
T Consensus 72 ~~v~l-~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 72 VKIML-NTTGPQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEEEC-CSCEEEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred eEEEE-CCCCCEEEECCCCCccccCCEEEEEEECCCC
Confidence 46777 579999999998888888999999 887643
No 159
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=27.66 E-value=26 Score=29.85 Aligned_cols=21 Identities=19% Similarity=0.297 Sum_probs=17.4
Q ss_pred eeEEEecCCEEEEEEeEeCCc
Q 007735 214 ETIEVHPGKTYRIRVHNVGIS 234 (591)
Q Consensus 214 ~~~~v~~G~~~rlRliN~~~~ 234 (591)
-.|+|++||++||.+-|-+..
T Consensus 71 k~InV~~GETVrF~v~nkt~~ 91 (131)
T 2wtp_A 71 RYVNVDSGETVAFRAGEKIVA 91 (131)
T ss_dssp CEEEEETTCEEEEEETTEEEE
T ss_pred eEEEecCCCEEEEEeCCcEEE
Confidence 459999999999999996533
No 160
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=27.31 E-value=29 Score=27.99 Aligned_cols=24 Identities=13% Similarity=0.047 Sum_probs=21.5
Q ss_pred EEEEECCCCCCCcEEeeCCCEEEE
Q 007735 47 QVIAINGKFPGPTINVTTNNNVVV 70 (591)
Q Consensus 47 ~~~~~Ng~~pgP~i~v~~Gd~v~v 70 (591)
..+++||+.-.+.-.++.||+|+|
T Consensus 59 ~~V~Vng~~v~~d~~L~dGDRVEI 82 (97)
T 2hj1_A 59 NKIGIFSRPIKLTDVLKEGDRIEI 82 (97)
T ss_dssp SEEEEEECSCCTTCBCCTTCEEEE
T ss_pred cEEEEcCEECCCCccCCCCCEEEE
Confidence 468999998888899999999987
No 161
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=26.49 E-value=95 Score=29.07 Aligned_cols=76 Identities=9% Similarity=-0.127 Sum_probs=48.5
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeCCceeeeEEecCh-hhhhh
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVKDQVGSFFYFPSL-HFQRA 135 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~-~~q~~ 135 (591)
...+.+..|..|++.++.. +.-++.....+. ..+| .-||..-...|++ +++|+|+..|.. -+..-
T Consensus 139 dn~lvlP~~~~Vr~~vtS~-DViHsf~vP~lg----~K~D--------aiPGr~n~~~~~~-~~~G~y~g~Cse~CG~~H 204 (227)
T 1v54_B 139 DNRVVLPMEMTIRMLVSSE-DVLHSWAVPSLG----LKTD--------AIPGRLNQTTLMS-SRPGLYYGQCSEICGSNH 204 (227)
T ss_dssp SSCEEEETTSCEEEEEEES-SSCEEEEEGGGT----EEEE--------ECTTCCEEEEECC-SSCEEEEECCCSCCSTTG
T ss_pred CceEEEecCCEEEEEEEeC-cccceeeecccC----cEEE--------ecCCceEEEEEec-CCcEEEEEEehhhccccc
Confidence 3679999999999999986 333333222221 1233 4567777778887 799999999983 11112
Q ss_pred cCceeeEEEec
Q 007735 136 SGGFGGFIINN 146 (591)
Q Consensus 136 ~Gl~G~liV~~ 146 (591)
+-|.+.+.+.+
T Consensus 205 s~M~~~v~vv~ 215 (227)
T 1v54_B 205 SFMPIVLELVP 215 (227)
T ss_dssp GGCCEEEEEEC
T ss_pred ccCeEEEEEEc
Confidence 23666666554
No 162
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=24.62 E-value=59 Score=26.32 Aligned_cols=56 Identities=14% Similarity=0.063 Sum_probs=35.2
Q ss_pred eCCCEEEEEEEECCCCC---ceeeecCccCCCCCCCCCCCCCCCccCCCCcEEEEEEeC-Cceee
Q 007735 63 TTNNNVVVNVRNKLDES---LLIHWSGIQQRRSSWQDGLLGTNCPIPPKWNWTYQFQVK-DQVGS 123 (591)
Q Consensus 63 ~~Gd~v~v~v~N~l~~~---~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~-~~~Gt 123 (591)
.+==.+.|.|+|-|+.+ ..++.-|-- -.++--.....|.||++..+++... -.+|.
T Consensus 19 ~~~l~v~vsf~NPL~~~L~~c~~~vEG~G-----L~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~ 78 (102)
T 2xzz_A 19 GQECEVQIVFKNPLPVTLTNVVFRLEGSG-----LQRPKILNVGDIGGNETVTLRQSFVPVRPGP 78 (102)
T ss_dssp SSCEEEEEEEECCSSSCBCSEEEEEEETT-----TEEEEEEEECCBCTTCEEEEEEEECCCSCSS
T ss_pred CCeEEEEEEEECCCCCcccCEEEEEECCC-----CCcceEEEcCcCCCCCEEEEEEEEecCcccc
Confidence 33346788999999864 456766631 1222111224699999999998883 44664
No 163
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=23.50 E-value=52 Score=26.19 Aligned_cols=70 Identities=16% Similarity=0.186 Sum_probs=35.1
Q ss_pred EecCCEEEEEEeEeCCcceEEEEEeCCeeEEEeecCCceeeeeeeEEEEccccEEEEEEEeCCC--CCcceEEEEee
Q 007735 218 VHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQN--ASTDYYIVASA 292 (591)
Q Consensus 218 v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~i~pGqR~dvlv~~~~~--~g~~y~i~~~~ 292 (591)
-+||+++++|++-.... .....-.--.+++...+|..+.... ......-.++.-+.++.. .| .|.|++..
T Consensus 13 YrPGetV~~~~~~~~~~-~~p~~~~~~~v~l~dp~g~~v~~~~---~~~~~~G~~~~~f~Lp~~~~~G-~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDEN-FHPLNELIPLVYIQDPKGNRIAQWQ---SFQLEGGLKQFSFPLSSEPFQG-SYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGG-GCBCCCEEEEEEEECTTSCEEEEEE---EEECBTTEEEEEEECCSSCCCE-EEEEEEEC
T ss_pred cCCCCEEEEEEEEECCC-CcCCCCCceEEEEECCCCCEEEEEE---eecCCCCEEEEEEECCCCCCCe-eEEEEEEE
Confidence 46999999998865332 1111000013455556665543211 111223345555555433 35 88888764
No 164
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=23.36 E-value=2.8e+02 Score=23.39 Aligned_cols=65 Identities=14% Similarity=0.182 Sum_probs=36.3
Q ss_pred CCcEEeeCCCEEEEEEEECCCCCceeeecCccCCCCCCCCCC--------CCCCCccCCCCcEEEEEEeCCceeee
Q 007735 57 GPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGL--------LGTNCPIPPKWNWTYQFQVKDQVGSF 124 (591)
Q Consensus 57 gP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv--------~~tq~~I~PG~~~~Y~f~~~~~~Gt~ 124 (591)
|-+|.++.||++.|.|.-+-... --|.=....+..-.|++ |-..-.+..|....+.|++. ++|+.
T Consensus 32 ~~~I~v~~Ge~~~I~L~~NPTTG--Y~W~~~~~~~~~L~~~~~~v~~~y~p~~~~~vGagG~~~w~f~A~-~~G~~ 104 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSNPTTG--FAWYFEGGTKESPNESMFTVENKYFPPDSKLLGAGGTEHFHVTVK-AAGTH 104 (131)
T ss_dssp TCEEEECTTCEEEEEEEECGGGS--CEEEBTTTBSSCSCTTTEEEEEEEECCTTCCTTCCEEEEEEEEEC-SSEEE
T ss_pred CCEEEEeCCCEEEEEeCCCCCCC--eEEEEecCCCccccccceeecceeeeCCCCCcCCCcEEEEEEEEc-cCceE
Confidence 45899999999999999773222 22221111111112332 11112355667788888884 67753
No 165
>2aqm_A Superoxide dismutase [CU-ZN]; oxidoreductase; 1.10A {Brucella abortus}
Probab=22.47 E-value=69 Score=28.09 Aligned_cols=25 Identities=12% Similarity=0.163 Sum_probs=20.3
Q ss_pred CCcEEEEEEecCCCcceeeeecCce
Q 007735 436 YRGFMEVILQNNDTKMHAYHMSGYA 460 (591)
Q Consensus 436 ~g~~ve~vl~N~~~~~HPfHlHG~~ 460 (591)
.+..|++.|.+..+..|-||+|-+-
T Consensus 29 ~gv~v~~~l~GL~pG~hGfHIHe~G 53 (154)
T 2aqm_A 29 GGLHFKVNMEKLTPGYHGFHVHENP 53 (154)
T ss_dssp TSEEEEEEECSCCSEEECEEEESSS
T ss_pred CCEEEEEEEECCCCCcceEEEccCC
Confidence 3567788888888889999999654
No 166
>1eqw_A Cu,Zn superoxide dismutase; greek KEY B-barrel, oxidoreductase; 2.30A {Salmonella typhimurium} SCOP: b.1.8.1 PDB: 2wn0_A* 2wn1_A* 2wwn_A* 2wwo_A*
Probab=21.11 E-value=69 Score=28.17 Aligned_cols=26 Identities=15% Similarity=0.289 Sum_probs=20.7
Q ss_pred cCCcEEEEEEecCCCcceeeeecCce
Q 007735 435 TYRGFMEVILQNNDTKMHAYHMSGYA 460 (591)
Q Consensus 435 ~~g~~ve~vl~N~~~~~HPfHlHG~~ 460 (591)
+.+..|++.|.+..+..|-||+|-+-
T Consensus 28 ~~gv~v~~~l~GL~pG~hGfHIHe~G 53 (156)
T 1eqw_A 28 PYGLLFTPHLNGLTPGIHGFHVHTNP 53 (156)
T ss_dssp TTEEEEEEEECSCCSEEECEEEESSS
T ss_pred CCcEEEEEEEeCCCCCceeEEECCCC
Confidence 34567788888888889999999653
No 167
>1eso_A SOD, Cu, Zn superoxide dismutase; oxidoreductase, monomeric superoxide dismutase, copper enzymes, enzyme evolution, X- RAY; 2.00A {Escherichia coli} SCOP: b.1.8.1 PDB: 2k4w_A
Probab=21.01 E-value=69 Score=28.07 Aligned_cols=26 Identities=12% Similarity=0.029 Sum_probs=20.6
Q ss_pred cCCcEEEEEEecCCCcceeeeecCce
Q 007735 435 TYRGFMEVILQNNDTKMHAYHMSGYA 460 (591)
Q Consensus 435 ~~g~~ve~vl~N~~~~~HPfHlHG~~ 460 (591)
+.+..|++.|.+..+..|-||+|-+-
T Consensus 28 ~~gv~v~~~l~GL~pG~hGfHIHe~G 53 (154)
T 1eso_A 28 DKGLEFSPDLKALPPGEHGFHIHAKG 53 (154)
T ss_dssp TTEEEEEEEECSCCSEEECEEEESSS
T ss_pred CCCEEEEEEEECCCCCcccEEEcCCC
Confidence 34567788888888889999999654
No 168
>1oal_A Superoxide dismutase; oxidoreductase, prokaryotic Cu, protein-subunit interaction recognition, protein electrostatic; 1.5A {Photobacterium leiognathi} SCOP: b.1.8.1 PDB: 1bzo_A 1ibh_A 1ibd_A 1yai_A 1ib5_A 1oaj_A 1ibb_A 1ibf_A
Probab=20.35 E-value=73 Score=27.81 Aligned_cols=26 Identities=15% Similarity=0.208 Sum_probs=20.9
Q ss_pred cCCcEEEEEEecCCCcceeeeecCce
Q 007735 435 TYRGFMEVILQNNDTKMHAYHMSGYA 460 (591)
Q Consensus 435 ~~g~~ve~vl~N~~~~~HPfHlHG~~ 460 (591)
+.+..|++.|.+..+..|-||+|-.-
T Consensus 25 ~~gv~v~~~l~GL~pG~hGfHIHe~G 50 (151)
T 1oal_A 25 KYGVVFIPELADLTPGEHGFHIHQNG 50 (151)
T ss_dssp TTEEEEEEEECSCCSEEECEEEESSS
T ss_pred CCcEEEEEEEECCCCCcceEEEccCC
Confidence 44567888888988889999999653
No 169
>2wyt_A Superoxide dismutase [CU-ZN]; oxidoreductase, disease mutation, amyotrophic lateral sclero antioxidant; HET: SO4; 1.00A {Homo sapiens} PDB: 2wyz_A* 2wz0_A* 2wz5_A* 1hl4_A 1spd_A 2c9v_A* 1hl5_A 1pu0_A 2c9u_A 2c9s_A* 2v0a_A* 3ecu_A 3kh3_A 3kh4_A 3re0_A 2wko_A 3gzo_A 2wz6_A* 3gzp_A 1uxl_A ...
Probab=20.16 E-value=1e+02 Score=26.89 Aligned_cols=22 Identities=9% Similarity=0.199 Sum_probs=18.9
Q ss_pred cEEEEEEecCCCcceeeeecCc
Q 007735 438 GFMEVILQNNDTKMHAYHMSGY 459 (591)
Q Consensus 438 ~~ve~vl~N~~~~~HPfHlHG~ 459 (591)
..|++.|.+..+..|-||+|-.
T Consensus 29 v~v~~~i~GL~pG~hg~HIHe~ 50 (153)
T 2wyt_A 29 VKVWGSIKGVTEGLHGFHVHEF 50 (153)
T ss_dssp EEEEEEEESCCSEEEEEEEESC
T ss_pred EEEEEEECCCCCcceeEEEecC
Confidence 5788889998888999999965
Done!