Query 007736
Match_columns 591
No_of_seqs 189 out of 2516
Neff 8.5
Searched_HMMs 46136
Date Thu Mar 28 14:38:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007736.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007736hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 3E-44 6.5E-49 391.9 39.3 535 27-575 32-569 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 8.8E-37 1.9E-41 317.6 29.6 468 22-571 11-492 (498)
3 PRK10207 dipeptide/tripeptide 100.0 2.7E-35 5.9E-40 321.1 36.7 464 25-572 7-482 (489)
4 TIGR00924 yjdL_sub1_fam amino 100.0 4.1E-34 9E-39 311.5 36.3 452 28-570 6-472 (475)
5 PRK15462 dipeptide/tripeptide 100.0 2.3E-33 4.9E-38 302.3 35.7 417 29-525 6-438 (493)
6 PRK09584 tppB putative tripept 100.0 7.1E-33 1.5E-37 303.5 35.2 460 26-572 15-485 (500)
7 PRK05122 major facilitator sup 99.9 1.1E-24 2.5E-29 232.2 32.2 376 29-565 12-388 (399)
8 PRK03545 putative arabinose tr 99.9 4.8E-25 1E-29 234.6 27.7 374 30-567 7-381 (390)
9 PRK10489 enterobactin exporter 99.9 8.3E-25 1.8E-29 234.8 26.4 395 33-580 18-413 (417)
10 PRK12382 putative transporter; 99.9 3.2E-24 6.8E-29 228.3 29.1 374 31-565 14-388 (392)
11 COG2814 AraJ Arabinose efflux 99.9 7.2E-24 1.6E-28 219.2 30.5 377 28-567 9-387 (394)
12 PRK10504 putative transporter; 99.9 5.3E-24 1.1E-28 232.3 30.8 179 31-241 9-187 (471)
13 PRK11551 putative 3-hydroxyphe 99.9 5.3E-24 1.1E-28 227.5 29.9 359 29-527 12-370 (406)
14 TIGR01299 synapt_SV2 synaptic 99.9 2.2E-24 4.9E-29 243.0 28.0 151 52-233 186-349 (742)
15 PRK11646 multidrug resistance 99.9 7.3E-24 1.6E-28 226.4 28.7 168 35-234 13-180 (400)
16 PRK10054 putative transporter; 99.9 3.9E-24 8.5E-29 228.1 26.0 174 30-235 5-178 (395)
17 PRK10077 xylE D-xylose transpo 99.9 2.6E-24 5.6E-29 235.0 24.2 433 32-579 12-470 (479)
18 PRK11663 regulatory protein Uh 99.9 8.2E-24 1.8E-28 228.5 27.2 167 33-231 24-190 (434)
19 TIGR00900 2A0121 H+ Antiporter 99.9 1.3E-23 2.9E-28 219.8 25.6 359 36-526 3-362 (365)
20 TIGR00926 2A1704 Peptide:H+ sy 99.9 1.1E-23 2.4E-28 234.7 25.9 336 47-446 2-344 (654)
21 TIGR00887 2A0109 phosphate:H+ 99.9 1.2E-23 2.5E-28 231.5 24.5 177 31-232 15-218 (502)
22 TIGR00903 2A0129 major facilit 99.9 4E-23 8.7E-28 217.8 27.0 360 44-563 3-362 (368)
23 PRK14995 methyl viologen resis 99.9 2.3E-23 5.1E-28 228.6 26.1 399 31-526 5-412 (495)
24 PRK09705 cynX putative cyanate 99.9 4.2E-23 9.1E-28 220.0 27.3 366 45-574 22-389 (393)
25 PRK15402 multidrug efflux syst 99.9 8.5E-23 1.8E-27 218.4 29.6 160 46-237 27-186 (406)
26 PRK09556 uhpT sugar phosphate 99.9 1.5E-23 3.3E-28 228.5 24.1 150 56-231 52-204 (467)
27 PRK09874 drug efflux system pr 99.9 2.4E-23 5.2E-28 222.3 24.5 378 32-565 14-397 (408)
28 PRK10213 nepI ribonucleoside t 99.9 1.4E-22 3E-27 216.1 28.8 173 28-232 16-188 (394)
29 TIGR02332 HpaX 4-hydroxyphenyl 99.9 1.2E-22 2.5E-27 218.0 28.2 180 30-241 6-191 (412)
30 TIGR00879 SP MFS transporter, 99.9 8.8E-23 1.9E-27 221.1 27.4 142 65-234 68-212 (481)
31 PRK10406 alpha-ketoglutarate t 99.9 2.9E-22 6.2E-27 216.3 31.1 175 32-230 22-210 (432)
32 TIGR00893 2A0114 d-galactonate 99.9 8.6E-23 1.9E-27 215.2 26.1 155 53-238 14-168 (399)
33 PRK11273 glpT sn-glycerol-3-ph 99.9 1E-22 2.2E-27 221.1 26.8 156 54-237 50-206 (452)
34 PRK12307 putative sialic acid 99.9 7E-23 1.5E-27 220.3 24.4 166 30-227 16-181 (426)
35 PRK10642 proline/glycine betai 99.9 2.4E-22 5.2E-27 220.4 28.9 175 31-229 15-203 (490)
36 PLN00028 nitrate transmembrane 99.9 3.9E-22 8.5E-27 217.8 30.4 174 30-236 34-216 (476)
37 COG2271 UhpC Sugar phosphate p 99.9 6.6E-23 1.4E-27 209.3 21.4 181 28-239 21-206 (448)
38 TIGR00899 2A0120 sugar efflux 99.9 3.6E-22 7.7E-27 210.5 27.7 172 38-240 3-177 (375)
39 PF07690 MFS_1: Major Facilita 99.9 4.2E-23 9.2E-28 215.0 20.4 350 38-518 2-352 (352)
40 TIGR00890 2A0111 Oxalate/Forma 99.9 6.8E-23 1.5E-27 215.1 22.1 339 48-527 19-357 (377)
41 TIGR00891 2A0112 putative sial 99.9 2.7E-22 5.8E-27 213.3 26.6 172 28-231 8-181 (405)
42 TIGR00892 2A0113 monocarboxyla 99.9 7.8E-23 1.7E-27 222.1 22.4 150 57-238 43-193 (455)
43 TIGR00711 efflux_EmrB drug res 99.9 1.8E-22 3.9E-27 220.7 25.1 398 34-526 4-409 (485)
44 PRK03699 putative transporter; 99.9 1.4E-21 3E-26 208.4 30.3 172 29-232 4-176 (394)
45 PRK09952 shikimate transporter 99.9 1.3E-21 2.8E-26 211.5 29.7 175 30-228 20-209 (438)
46 cd06174 MFS The Major Facilita 99.9 9.9E-22 2.1E-26 203.9 27.2 345 35-562 2-348 (352)
47 TIGR00895 2A0115 benzoate tran 99.9 8.1E-22 1.8E-26 208.7 26.8 179 30-240 15-193 (398)
48 TIGR00710 efflux_Bcr_CflA drug 99.9 1.1E-21 2.3E-26 207.5 27.6 176 31-238 4-179 (385)
49 TIGR00894 2A0114euk Na(+)-depe 99.9 9.1E-22 2E-26 214.4 27.7 147 62-237 70-217 (465)
50 PRK03633 putative MFS family t 99.9 1.5E-21 3.2E-26 207.2 28.3 156 31-218 5-160 (381)
51 TIGR00897 2A0118 polyol permea 99.9 4.2E-21 9E-26 205.2 31.9 171 28-226 9-180 (402)
52 PRK15011 sugar efflux transpor 99.9 2.8E-21 6E-26 206.0 29.9 178 31-240 14-195 (393)
53 KOG0569 Permease of the major 99.9 2.2E-22 4.9E-27 214.1 20.7 400 71-581 63-469 (485)
54 PRK10091 MFS transport protein 99.9 1.3E-21 2.7E-26 207.8 26.1 175 31-237 2-176 (382)
55 PRK03893 putative sialic acid 99.9 1.4E-21 3E-26 214.5 27.2 167 29-227 17-183 (496)
56 PRK11652 emrD multidrug resist 99.9 4.4E-21 9.5E-26 204.3 29.9 172 30-233 6-177 (394)
57 TIGR00898 2A0119 cation transp 99.9 1.7E-21 3.8E-26 214.4 27.1 386 57-574 113-502 (505)
58 PRK15403 multidrug efflux syst 99.9 1E-20 2.2E-25 203.0 31.6 151 59-240 42-192 (413)
59 PRK11195 lysophospholipid tran 99.9 3.5E-21 7.7E-26 205.2 27.6 164 32-231 3-166 (393)
60 PRK09528 lacY galactoside perm 99.9 2.1E-21 4.7E-26 208.6 26.0 392 32-567 10-404 (420)
61 PRK15075 citrate-proton sympor 99.9 8.8E-21 1.9E-25 204.8 28.3 172 31-226 14-199 (434)
62 TIGR00712 glpT glycerol-3-phos 99.9 2.4E-21 5.2E-26 209.5 23.8 177 35-240 30-207 (438)
63 TIGR00881 2A0104 phosphoglycer 99.9 1.3E-21 2.9E-26 205.5 20.0 163 43-237 6-169 (379)
64 PRK11043 putative transporter; 99.9 2.4E-20 5.2E-25 199.1 29.4 146 59-235 32-177 (401)
65 PRK10473 multidrug efflux syst 99.9 4.2E-20 9E-25 196.6 29.4 172 34-237 5-176 (392)
66 KOG1330 Sugar transporter/spin 99.9 1.7E-21 3.7E-26 200.7 16.9 184 26-241 27-211 (493)
67 TIGR00902 2A0127 phenyl propri 99.9 6.5E-20 1.4E-24 194.7 29.3 362 34-560 6-373 (382)
68 TIGR00882 2A0105 oligosacchari 99.9 5.8E-20 1.2E-24 196.0 28.4 178 32-235 2-179 (396)
69 PRK11102 bicyclomycin/multidru 99.9 7.5E-20 1.6E-24 193.3 28.3 158 48-237 7-164 (377)
70 COG2223 NarK Nitrate/nitrite t 99.9 6E-20 1.3E-24 188.1 25.9 389 29-568 11-403 (417)
71 PRK15034 nitrate/nitrite trans 99.9 1.1E-19 2.4E-24 194.3 29.1 382 32-568 34-456 (462)
72 TIGR00792 gph sugar (Glycoside 99.9 8.6E-20 1.9E-24 196.9 28.6 356 41-529 8-382 (437)
73 PF05977 MFS_3: Transmembrane 99.9 1.4E-19 3E-24 197.8 30.2 361 32-528 10-370 (524)
74 KOG0254 Predicted transporter 99.9 2.5E-20 5.3E-25 205.6 23.8 401 69-579 90-496 (513)
75 PRK10133 L-fucose transporter; 99.9 2.3E-19 5.1E-24 193.8 30.1 153 30-211 24-176 (438)
76 TIGR00886 2A0108 nitrite extru 99.9 3.1E-20 6.8E-25 195.1 22.3 159 33-223 2-171 (366)
77 KOG2532 Permease of the major 99.9 1.1E-20 2.4E-25 203.1 18.5 377 62-566 67-447 (466)
78 PRK08633 2-acyl-glycerophospho 99.8 3.8E-19 8.3E-24 214.6 30.3 156 31-214 8-165 (1146)
79 PRK11010 ampG muropeptide tran 99.8 1.6E-18 3.5E-23 189.9 32.0 175 30-234 10-190 (491)
80 TIGR00889 2A0110 nucleoside tr 99.8 2E-18 4.2E-23 185.6 31.9 386 37-569 7-405 (418)
81 PRK06814 acylglycerophosphoeth 99.8 4.6E-19 9.9E-24 213.7 27.7 144 58-231 41-187 (1140)
82 PRK11128 putative 3-phenylprop 99.8 1.3E-18 2.9E-23 184.6 28.1 339 40-528 12-356 (382)
83 TIGR00883 2A0106 metabolite-pr 99.8 4.1E-19 8.8E-24 187.6 23.1 164 45-232 6-184 (394)
84 PF00854 PTR2: POT family; In 99.8 4.7E-21 1E-25 202.7 7.7 365 99-510 1-369 (372)
85 PF00083 Sugar_tr: Sugar (and 99.8 2.9E-23 6.3E-28 225.0 -13.9 397 68-579 46-449 (451)
86 TIGR00896 CynX cyanate transpo 99.8 1.3E-18 2.8E-23 182.6 20.2 326 52-528 20-349 (355)
87 PRK11902 ampG muropeptide tran 99.8 4.5E-17 9.8E-22 174.1 31.8 167 37-233 4-176 (402)
88 TIGR00885 fucP L-fucose:H+ sym 99.8 3.7E-17 8E-22 175.2 27.9 169 34-231 5-199 (410)
89 PRK10429 melibiose:sodium symp 99.8 4.2E-17 9E-22 178.2 28.4 365 37-529 11-395 (473)
90 TIGR01301 GPH_sucrose GPH fami 99.8 8.8E-17 1.9E-21 173.1 29.0 445 33-570 5-475 (477)
91 TIGR00901 2A0125 AmpG-related 99.8 2.6E-17 5.7E-22 172.7 24.3 154 53-236 9-175 (356)
92 PRK09669 putative symporter Ya 99.8 8.9E-17 1.9E-21 174.2 28.1 173 35-231 12-196 (444)
93 KOG0252 Inorganic phosphate tr 99.8 2.1E-18 4.5E-23 177.3 13.7 441 29-581 35-512 (538)
94 PRK09848 glucuronide transport 99.8 3E-16 6.4E-21 170.3 29.7 365 33-529 9-390 (448)
95 KOG3764 Vesicular amine transp 99.7 5E-17 1.1E-21 164.5 18.2 148 62-239 100-247 (464)
96 KOG2615 Permease of the major 99.7 1.8E-16 3.8E-21 159.6 19.8 119 63-213 63-181 (451)
97 TIGR00805 oat sodium-independe 99.7 6E-16 1.3E-20 174.0 26.6 179 29-214 29-234 (633)
98 KOG0255 Synaptic vesicle trans 99.7 1.6E-15 3.5E-20 167.7 29.4 140 61-234 111-250 (521)
99 TIGR02718 sider_RhtX_FptX side 99.7 1.2E-15 2.7E-20 162.3 26.5 176 34-237 3-182 (390)
100 PF03825 Nuc_H_symport: Nucleo 99.7 5.4E-15 1.2E-19 157.1 31.2 353 37-529 7-366 (400)
101 TIGR00788 fbt folate/biopterin 99.7 2.6E-15 5.6E-20 163.5 29.1 379 33-529 27-415 (468)
102 PF13347 MFS_2: MFS/sugar tran 99.7 3.8E-16 8.2E-21 168.4 21.2 357 41-529 10-386 (428)
103 PF06609 TRI12: Fungal trichot 99.7 3.7E-15 8.1E-20 162.9 28.4 150 54-236 65-214 (599)
104 COG0738 FucP Fucose permease [ 99.7 2.9E-15 6.3E-20 152.8 25.7 138 48-213 28-165 (422)
105 TIGR00806 rfc RFC reduced fola 99.7 7.9E-16 1.7E-20 162.1 22.2 141 51-224 44-185 (511)
106 PF01306 LacY_symp: LacY proto 99.7 1.9E-15 4E-20 158.4 21.0 394 31-570 6-404 (412)
107 KOG2504 Monocarboxylate transp 99.7 3.3E-15 7.1E-20 162.8 21.6 419 35-566 45-476 (509)
108 PRK11462 putative transporter; 99.7 1.7E-14 3.7E-19 156.9 27.0 155 35-212 12-170 (460)
109 KOG2533 Permease of the major 99.7 3.4E-14 7.4E-19 153.5 28.5 152 59-241 72-229 (495)
110 KOG0253 Synaptic vesicle trans 99.7 3.8E-14 8.3E-19 141.9 25.6 425 41-574 86-527 (528)
111 PTZ00207 hypothetical protein; 99.7 1.6E-13 3.4E-18 151.1 32.7 156 48-233 43-199 (591)
112 COG2807 CynX Cyanate permease 99.7 2.2E-14 4.8E-19 144.4 23.5 346 34-529 14-361 (395)
113 COG2211 MelB Na+/melibiose sym 99.6 1.3E-13 2.9E-18 145.9 29.4 375 31-538 11-403 (467)
114 COG2271 UhpC Sugar phosphate p 99.6 4.3E-14 9.3E-19 145.1 14.7 182 31-240 251-435 (448)
115 KOG4686 Predicted sugar transp 99.5 5.9E-14 1.3E-18 135.8 9.7 135 55-216 66-200 (459)
116 PRK10642 proline/glycine betai 99.5 4.7E-13 1E-17 147.0 16.3 178 30-235 248-426 (490)
117 PRK09952 shikimate transporter 99.5 6.1E-13 1.3E-17 143.9 16.3 182 29-237 247-431 (438)
118 PRK09556 uhpT sugar phosphate 99.5 4.4E-13 9.6E-18 146.2 15.1 177 32-237 258-447 (467)
119 PRK15011 sugar efflux transpor 99.5 1.8E-12 3.8E-17 138.3 18.4 176 30-237 214-389 (393)
120 PF11700 ATG22: Vacuole efflux 99.5 3.7E-11 8.1E-16 130.4 27.9 84 468-564 383-466 (477)
121 KOG2563 Permease of the major 99.4 3.6E-11 7.9E-16 124.5 23.9 391 48-576 60-460 (480)
122 TIGR00883 2A0106 metabolite-pr 99.4 1.3E-12 2.9E-17 137.8 13.4 169 31-227 218-389 (394)
123 TIGR00890 2A0111 Oxalate/Forma 99.4 2.2E-12 4.8E-17 135.3 14.8 170 32-231 205-374 (377)
124 PF03209 PUCC: PUCC protein; 99.4 1.5E-10 3.4E-15 119.6 27.4 345 60-528 7-364 (403)
125 KOG2325 Predicted transporter/ 99.4 1.1E-12 2.5E-17 139.1 11.9 196 19-241 21-231 (488)
126 TIGR00889 2A0110 nucleoside tr 99.4 2.8E-12 6.1E-17 137.9 13.4 181 33-241 209-404 (418)
127 PRK03699 putative transporter; 99.4 5.6E-12 1.2E-16 134.4 15.3 170 32-233 205-374 (394)
128 TIGR00899 2A0120 sugar efflux 99.4 9.3E-12 2E-16 131.1 16.8 170 34-235 201-370 (375)
129 PRK11551 putative 3-hydroxyphe 99.4 6.2E-12 1.3E-16 134.3 15.4 171 34-236 222-393 (406)
130 PRK05122 major facilitator sup 99.4 6.6E-12 1.4E-16 133.9 15.4 168 40-241 224-391 (399)
131 cd06174 MFS The Major Facilita 99.4 1.7E-11 3.6E-16 127.0 16.9 173 32-235 175-348 (352)
132 PRK09705 cynX putative cyanate 99.4 2.1E-11 4.5E-16 130.1 17.7 177 32-241 205-383 (393)
133 PRK11663 regulatory protein Uh 99.3 1.8E-11 3.9E-16 132.3 16.8 181 32-240 243-425 (434)
134 PRK11273 glpT sn-glycerol-3-ph 99.3 1.2E-11 2.6E-16 134.4 15.3 177 32-236 253-432 (452)
135 PRK09528 lacY galactoside perm 99.3 4.6E-12 1E-16 136.2 11.8 172 35-237 226-401 (420)
136 TIGR00893 2A0114 d-galactonate 99.3 2.7E-11 5.8E-16 127.5 16.9 176 32-235 215-395 (399)
137 PRK09874 drug efflux system pr 99.3 1.3E-11 2.9E-16 131.6 14.6 169 39-238 226-397 (408)
138 TIGR00902 2A0127 phenyl propri 99.3 4.3E-11 9.3E-16 127.1 17.3 169 32-234 205-374 (382)
139 TIGR01299 synapt_SV2 synaptic 99.3 1.8E-11 4E-16 138.7 14.6 131 74-236 601-731 (742)
140 PRK10489 enterobactin exporter 99.3 1.5E-11 3.2E-16 132.1 13.1 176 34-241 226-401 (417)
141 COG2223 NarK Nitrate/nitrite t 99.3 3.7E-11 8.1E-16 123.8 14.9 186 31-241 217-403 (417)
142 TIGR00891 2A0112 putative sial 99.3 1.5E-11 3.2E-16 130.6 12.5 158 36-223 242-400 (405)
143 PRK03545 putative arabinose tr 99.3 8E-11 1.7E-15 125.3 17.8 176 33-240 206-381 (390)
144 PRK15075 citrate-proton sympor 99.3 2.8E-11 6.1E-16 130.8 14.4 153 38-218 244-398 (434)
145 TIGR00897 2A0118 polyol permea 99.3 6.4E-11 1.4E-15 126.6 15.8 177 32-237 222-399 (402)
146 TIGR00880 2_A_01_02 Multidrug 99.3 9E-12 1.9E-16 111.0 7.5 132 75-237 5-136 (141)
147 PRK03893 putative sialic acid 99.3 6.8E-11 1.5E-15 129.9 15.8 149 49-226 292-440 (496)
148 PRK11010 ampG muropeptide tran 99.3 7.8E-11 1.7E-15 129.3 15.8 179 33-238 223-402 (491)
149 PRK12382 putative transporter; 99.3 4.7E-11 1E-15 127.0 13.7 164 40-237 224-387 (392)
150 PRK10406 alpha-ketoglutarate t 99.3 1E-10 2.3E-15 126.3 16.4 176 34-237 244-422 (432)
151 PRK03633 putative MFS family t 99.2 1.5E-10 3.2E-15 122.8 16.5 158 43-235 211-368 (381)
152 TIGR00712 glpT glycerol-3-phos 99.2 1.4E-10 2.9E-15 125.6 15.9 177 32-237 251-431 (438)
153 TIGR00892 2A0113 monocarboxyla 99.2 2.4E-10 5.2E-15 124.3 14.9 172 32-234 241-416 (455)
154 TIGR01272 gluP glucose/galacto 99.2 6.6E-10 1.4E-14 114.5 17.4 80 144-229 8-103 (310)
155 PF11700 ATG22: Vacuole efflux 99.2 4.1E-10 8.8E-15 122.3 16.4 187 30-239 279-468 (477)
156 TIGR00879 SP MFS transporter, 99.2 4.1E-10 8.9E-15 121.9 15.8 170 50-240 302-471 (481)
157 TIGR00881 2A0104 phosphoglycer 99.2 1.8E-10 4E-15 120.7 12.1 164 32-221 216-379 (379)
158 TIGR00894 2A0114euk Na(+)-depe 99.2 1.2E-09 2.6E-14 119.1 18.6 177 31-236 260-447 (465)
159 TIGR01272 gluP glucose/galacto 99.2 7E-10 1.5E-14 114.3 15.7 163 31-227 139-303 (310)
160 TIGR02332 HpaX 4-hydroxyphenyl 99.1 4.9E-10 1.1E-14 120.3 14.8 165 32-227 242-409 (412)
161 TIGR00900 2A0121 H+ Antiporter 99.1 1.6E-10 3.5E-15 120.7 10.5 155 32-216 210-365 (365)
162 COG2814 AraJ Arabinose efflux 99.1 1.3E-09 2.8E-14 113.5 16.9 178 31-240 210-387 (394)
163 TIGR00882 2A0105 oligosacchari 99.1 5.4E-10 1.2E-14 119.1 14.5 171 33-234 216-390 (396)
164 COG2270 Permeases of the major 99.1 2.8E-09 6.1E-14 110.2 18.8 128 52-207 35-170 (438)
165 PRK11128 putative 3-phenylprop 99.1 1.1E-09 2.3E-14 116.4 16.5 167 32-232 205-372 (382)
166 PF03092 BT1: BT1 family; Int 99.1 5.1E-09 1.1E-13 112.9 21.6 162 54-240 11-176 (433)
167 PF05631 DUF791: Protein of un 99.1 9.4E-09 2E-13 104.9 21.8 154 60-240 61-217 (354)
168 PLN00028 nitrate transmembrane 99.1 1E-09 2.3E-14 120.0 15.9 173 33-238 253-432 (476)
169 KOG4686 Predicted sugar transp 99.1 8.6E-10 1.9E-14 107.3 12.9 177 21-230 253-433 (459)
170 PRK10504 putative transporter; 99.1 1.1E-09 2.3E-14 119.6 15.2 158 32-217 261-418 (471)
171 KOG2816 Predicted transporter 99.1 1.2E-08 2.6E-13 109.9 22.7 132 78-245 72-205 (463)
172 TIGR00792 gph sugar (Glycoside 99.1 5E-10 1.1E-14 120.8 12.2 163 31-218 221-384 (437)
173 PRK15034 nitrate/nitrite trans 99.1 1.8E-09 3.9E-14 116.0 16.0 188 32-240 252-455 (462)
174 PRK15402 multidrug efflux syst 99.1 4.7E-09 1E-13 112.3 19.0 167 33-226 216-382 (406)
175 PRK12307 putative sialic acid 99.1 2.4E-09 5.3E-14 115.1 16.1 152 43-224 242-393 (426)
176 PRK10091 MFS transport protein 99.1 2.2E-09 4.8E-14 113.9 15.6 171 34-236 201-373 (382)
177 TIGR02718 sider_RhtX_FptX side 99.1 2.4E-09 5.1E-14 114.0 15.4 174 33-232 209-384 (390)
178 TIGR00895 2A0115 benzoate tran 99.1 1.1E-09 2.5E-14 115.7 12.4 148 32-211 250-397 (398)
179 PF03137 OATP: Organic Anion T 99.0 2.5E-11 5.5E-16 133.5 -0.4 159 43-212 13-201 (539)
180 KOG3626 Organic anion transpor 99.0 3.5E-08 7.6E-13 109.4 23.7 206 31-243 95-347 (735)
181 PRK11902 ampG muropeptide tran 99.0 2.9E-09 6.2E-14 113.9 15.0 173 33-236 210-387 (402)
182 COG2270 Permeases of the major 99.0 2.2E-09 4.7E-14 111.0 12.4 174 32-236 252-426 (438)
183 TIGR00896 CynX cyanate transpo 99.0 4.5E-09 9.7E-14 110.3 15.0 153 32-216 197-350 (355)
184 PRK10133 L-fucose transporter; 99.0 8.1E-09 1.7E-13 111.8 16.3 165 33-231 259-425 (438)
185 TIGR00710 efflux_Bcr_CflA drug 99.0 7.6E-09 1.7E-13 109.2 15.7 164 33-223 207-370 (385)
186 PF05977 MFS_3: Transmembrane 99.0 3.3E-09 7.1E-14 116.5 13.1 172 33-235 219-390 (524)
187 TIGR00711 efflux_EmrB drug res 99.0 2.4E-09 5.3E-14 117.0 11.9 156 32-214 255-410 (485)
188 TIGR00887 2A0109 phosphate:H+ 99.0 4.9E-09 1.1E-13 115.6 14.2 173 40-241 296-490 (502)
189 PRK10054 putative transporter; 99.0 4.3E-09 9.3E-14 112.3 13.2 170 32-232 206-377 (395)
190 PRK14995 methyl viologen resis 99.0 5.3E-09 1.1E-13 115.1 13.4 154 32-213 259-412 (495)
191 PRK10077 xylE D-xylose transpo 98.9 2.4E-08 5.3E-13 109.0 17.5 163 50-240 289-458 (479)
192 PRK10213 nepI ribonucleoside t 98.9 3.1E-08 6.7E-13 105.7 17.6 167 32-230 216-382 (394)
193 PRK11646 multidrug resistance 98.9 1.9E-08 4.1E-13 107.6 15.4 155 48-233 224-382 (400)
194 KOG2532 Permease of the major 98.9 8.1E-09 1.7E-13 111.6 11.8 178 32-238 258-446 (466)
195 PRK08633 2-acyl-glycerophospho 98.9 1.5E-08 3.2E-13 122.9 15.5 163 32-225 232-396 (1146)
196 PF13347 MFS_2: MFS/sugar tran 98.9 3.1E-08 6.6E-13 106.9 16.2 164 31-218 224-388 (428)
197 TIGR00903 2A0129 major facilit 98.9 3.6E-08 7.7E-13 104.2 16.3 166 32-235 192-361 (368)
198 PF07690 MFS_1: Major Facilita 98.9 5.4E-09 1.2E-13 108.6 8.8 144 34-205 208-352 (352)
199 TIGR00901 2A0125 AmpG-related 98.9 1.1E-08 2.4E-13 107.3 11.1 145 33-198 210-355 (356)
200 PRK06814 acylglycerophosphoeth 98.9 1.3E-08 2.8E-13 123.3 12.7 182 32-226 225-409 (1140)
201 PRK11102 bicyclomycin/multidru 98.9 6E-08 1.3E-12 102.4 16.2 149 33-209 195-344 (377)
202 KOG2504 Monocarboxylate transp 98.8 2.5E-08 5.3E-13 109.1 12.6 176 32-239 298-476 (509)
203 PRK09848 glucuronide transport 98.8 1.5E-08 3.3E-13 109.9 10.6 163 32-217 228-391 (448)
204 KOG3762 Predicted transporter 98.8 2E-07 4.3E-12 98.8 18.3 140 387-573 414-554 (618)
205 PRK11195 lysophospholipid tran 98.8 1.1E-07 2.4E-12 101.4 16.8 161 42-234 215-375 (393)
206 PRK11043 putative transporter; 98.8 1.4E-07 3E-12 100.7 17.2 156 35-218 206-361 (401)
207 PRK10473 multidrug efflux syst 98.8 1.5E-07 3.3E-12 100.1 16.6 79 40-119 211-289 (392)
208 PRK10429 melibiose:sodium symp 98.8 1.3E-07 2.9E-12 103.4 15.7 165 32-217 231-396 (473)
209 PF03825 Nuc_H_symport: Nucleo 98.7 2.3E-07 4.9E-12 98.9 16.4 180 32-237 207-393 (400)
210 KOG3098 Uncharacterized conser 98.7 2.5E-06 5.4E-11 91.0 23.7 103 74-208 56-158 (461)
211 KOG0569 Permease of the major 98.7 8.3E-08 1.8E-12 103.1 12.5 190 31-245 268-460 (485)
212 TIGR00898 2A0119 cation transp 98.7 6.7E-08 1.4E-12 106.5 11.7 129 75-234 362-490 (505)
213 COG2807 CynX Cyanate permease 98.7 4.8E-07 1E-11 91.9 16.5 166 33-229 209-375 (395)
214 KOG0253 Synaptic vesicle trans 98.7 2.8E-07 6.1E-12 93.3 14.0 170 32-234 326-514 (528)
215 TIGR00886 2A0108 nitrite extru 98.7 1.2E-07 2.6E-12 99.5 12.3 141 33-201 226-366 (366)
216 PF01306 LacY_symp: LacY proto 98.6 2.4E-07 5.2E-12 97.6 12.2 179 31-240 219-401 (412)
217 TIGR00885 fucP L-fucose:H+ sym 98.6 5.4E-07 1.2E-11 96.7 15.2 164 33-230 233-403 (410)
218 PRK09669 putative symporter Ya 98.6 2.8E-07 6E-12 100.0 11.7 162 32-218 229-392 (444)
219 KOG4332 Predicted sugar transp 98.6 2.8E-07 6.1E-12 89.2 9.8 148 56-234 60-215 (454)
220 PRK11652 emrD multidrug resist 98.5 2.4E-06 5.3E-11 90.9 16.0 144 46-218 221-364 (394)
221 TIGR00880 2_A_01_02 Multidrug 98.5 2.5E-06 5.5E-11 75.5 12.7 131 388-565 7-137 (141)
222 COG0738 FucP Fucose permease [ 98.3 1.3E-05 2.9E-10 82.7 14.6 156 33-222 237-392 (422)
223 PF06813 Nodulin-like: Nodulin 98.3 3.6E-05 7.9E-10 76.1 17.1 138 47-211 17-154 (250)
224 KOG1330 Sugar transporter/spin 98.3 3E-07 6.5E-12 96.1 2.3 152 381-578 70-221 (493)
225 COG2211 MelB Na+/melibiose sym 98.3 7.1E-06 1.5E-10 87.6 12.6 162 32-216 236-398 (467)
226 KOG3764 Vesicular amine transp 98.3 1.3E-06 2.9E-11 89.6 6.1 175 33-232 271-447 (464)
227 TIGR01301 GPH_sucrose GPH fami 98.2 9.1E-06 2E-10 88.2 12.4 209 25-241 251-473 (477)
228 PRK15403 multidrug efflux syst 98.2 2.8E-05 6E-10 83.6 15.9 167 32-227 218-385 (413)
229 TIGR00924 yjdL_sub1_fam amino 98.2 6.8E-06 1.5E-10 90.0 11.3 183 34-237 274-466 (475)
230 PRK11462 putative transporter; 98.2 2.7E-05 5.9E-10 84.9 15.9 160 33-217 229-390 (460)
231 COG0477 ProP Permeases of the 98.2 2E-05 4.4E-10 78.6 13.3 150 47-226 17-172 (338)
232 PF03209 PUCC: PUCC protein; 98.2 2.8E-05 6E-10 81.0 14.0 174 35-235 211-394 (403)
233 KOG2533 Permease of the major 98.1 1.2E-05 2.5E-10 87.6 10.9 164 32-224 273-441 (495)
234 PF00083 Sugar_tr: Sugar (and 98.1 4.1E-08 8.8E-13 106.5 -8.4 187 33-243 253-440 (451)
235 KOG0637 Sucrose transporter an 98.0 5.3E-05 1.1E-09 79.4 12.4 166 32-211 32-202 (498)
236 PF02487 CLN3: CLN3 protein; 98.0 0.0017 3.7E-08 68.4 23.5 62 464-525 334-395 (402)
237 KOG3574 Acetyl-CoA transporter 98.0 0.0017 3.7E-08 66.7 22.0 159 27-208 26-189 (510)
238 KOG3762 Predicted transporter 98.0 1.8E-05 4E-10 84.2 8.1 171 37-239 376-547 (618)
239 PF12832 MFS_1_like: MFS_1 lik 98.0 5.8E-05 1.3E-09 60.4 9.2 70 37-108 5-74 (77)
240 PRK09584 tppB putative tripept 97.9 6.9E-05 1.5E-09 82.6 11.6 149 39-209 279-439 (500)
241 TIGR00805 oat sodium-independe 97.9 0.00022 4.7E-09 80.9 15.7 176 32-214 330-581 (633)
242 TIGR00788 fbt folate/biopterin 97.9 1.6E-05 3.4E-10 87.0 5.8 146 60-226 280-430 (468)
243 PRK15462 dipeptide/tripeptide 97.8 9.7E-05 2.1E-09 80.6 11.1 130 389-564 55-187 (493)
244 KOG0254 Predicted transporter 97.8 0.00015 3.3E-09 80.2 12.5 195 30-243 292-487 (513)
245 PF01770 Folate_carrier: Reduc 97.8 0.0013 2.9E-08 69.3 18.5 153 52-236 23-179 (412)
246 PRK10207 dipeptide/tripeptide 97.8 9.7E-05 2.1E-09 81.1 10.0 105 391-527 62-169 (489)
247 PF06963 FPN1: Ferroportin1 (F 97.7 0.025 5.4E-07 60.7 26.6 190 32-234 2-195 (432)
248 TIGR00806 rfc RFC reduced fola 97.6 0.00086 1.9E-08 71.9 12.8 105 387-525 70-174 (511)
249 KOG2563 Permease of the major 97.5 0.00045 9.8E-09 72.5 10.2 182 32-241 266-452 (480)
250 KOG0252 Inorganic phosphate tr 97.5 8.9E-05 1.9E-09 77.8 5.0 129 83-237 363-496 (538)
251 TIGR00769 AAA ADP/ATP carrier 97.5 0.048 1E-06 59.2 26.1 164 31-212 6-189 (472)
252 PTZ00207 hypothetical protein; 97.4 0.0015 3.2E-08 72.8 11.9 127 398-567 80-206 (591)
253 PF05978 UNC-93: Ion channel r 97.1 0.01 2.2E-07 54.4 12.3 103 74-208 43-145 (156)
254 PF06609 TRI12: Fungal trichot 97.0 0.0055 1.2E-07 68.1 11.5 155 27-210 305-463 (599)
255 KOG0255 Synaptic vesicle trans 96.9 0.0038 8.2E-08 69.2 9.5 137 383-570 122-258 (521)
256 KOG3626 Organic anion transpor 96.8 0.02 4.3E-07 64.5 14.6 176 33-214 393-649 (735)
257 PF06963 FPN1: Ferroportin1 (F 96.8 0.018 3.9E-07 61.7 13.8 154 34-209 260-413 (432)
258 KOG1479 Nucleoside transporter 96.8 0.33 7.2E-06 51.1 22.7 57 464-520 342-398 (406)
259 KOG2816 Predicted transporter 96.8 0.0049 1.1E-07 66.8 9.5 152 30-213 238-391 (463)
260 KOG2325 Predicted transporter/ 96.8 0.0086 1.9E-07 64.5 10.8 160 384-572 76-235 (488)
261 KOG2615 Permease of the major 96.7 0.011 2.4E-07 61.0 10.3 133 52-214 280-414 (451)
262 PF06779 DUF1228: Protein of u 96.7 0.021 4.6E-07 46.3 9.7 72 46-119 6-77 (85)
263 PF03137 OATP: Organic Anion T 96.5 0.00073 1.6E-08 74.8 0.0 176 33-214 306-514 (539)
264 PRK03612 spermidine synthase; 96.3 0.16 3.6E-06 56.1 17.3 173 38-237 20-196 (521)
265 COG3104 PTR2 Dipeptide/tripept 96.0 0.0064 1.4E-07 65.0 4.0 118 421-572 93-212 (498)
266 PF06813 Nodulin-like: Nodulin 95.9 0.055 1.2E-06 53.6 10.0 121 418-569 64-184 (250)
267 PF00854 PTR2: POT family; In 95.1 0.091 2E-06 55.5 9.0 123 421-570 2-127 (372)
268 PF03092 BT1: BT1 family; Int 94.6 0.19 4.2E-06 54.3 10.3 115 421-568 60-177 (433)
269 TIGR00926 2A1704 Peptide:H+ sy 94.6 0.17 3.7E-06 57.5 10.2 64 461-524 561-624 (654)
270 PF13000 Acatn: Acetyl-coenzym 94.0 5.9 0.00013 43.0 19.2 63 466-528 406-468 (544)
271 TIGR00939 2a57 Equilibrative N 93.9 11 0.00024 40.7 27.8 57 465-521 372-428 (437)
272 PF02487 CLN3: CLN3 protein; 93.7 0.35 7.5E-06 51.3 9.4 61 145-211 334-394 (402)
273 KOG0637 Sucrose transporter an 93.7 0.17 3.7E-06 53.8 7.0 162 26-216 273-472 (498)
274 COG3202 ATP/ADP translocase [E 93.4 14 0.0003 40.1 23.1 163 30-213 25-209 (509)
275 PF05978 UNC-93: Ion channel r 92.2 1.3 2.9E-05 40.5 9.9 62 464-525 88-149 (156)
276 KOG3098 Uncharacterized conser 92.2 1.6 3.4E-05 47.3 11.9 116 78-206 289-406 (461)
277 KOG3097 Predicted membrane pro 91.7 1.8 3.9E-05 44.3 10.8 117 28-177 25-141 (390)
278 PF05631 DUF791: Protein of un 91.4 5.1 0.00011 41.7 14.1 111 382-526 72-188 (354)
279 KOG3880 Predicted small molecu 90.7 6.9 0.00015 39.8 13.7 61 464-524 341-401 (409)
280 PF03219 TLC: TLC ATP/ADP tran 87.7 17 0.00036 40.0 15.4 166 30-213 22-205 (491)
281 KOG4332 Predicted sugar transp 85.9 3.5 7.6E-05 41.0 8.0 140 70-233 284-425 (454)
282 KOG3810 Micronutrient transpor 85.7 1.9 4.1E-05 44.5 6.2 96 464-567 325-422 (433)
283 TIGR00939 2a57 Equilibrative N 83.2 3.1 6.6E-05 45.1 7.1 57 145-207 371-427 (437)
284 COG5336 Uncharacterized protei 81.4 9.4 0.0002 32.1 7.5 41 494-534 35-75 (116)
285 PF01770 Folate_carrier: Reduc 81.0 54 0.0012 35.1 15.2 83 421-526 72-154 (412)
286 TIGR00769 AAA ADP/ATP carrier 78.3 1.1E+02 0.0024 33.5 17.1 70 156-230 276-345 (472)
287 COG0477 ProP Permeases of the 73.6 13 0.00029 36.1 8.0 62 465-526 94-157 (338)
288 PF07672 MFS_Mycoplasma: Mycop 73.0 65 0.0014 32.1 12.1 54 186-239 4-62 (267)
289 COG5336 Uncharacterized protei 72.5 12 0.00026 31.5 5.9 40 74-113 48-87 (116)
290 PRK03612 spermidine synthase; 60.8 80 0.0017 35.1 11.4 53 472-525 117-169 (521)
291 PF01733 Nucleoside_tran: Nucl 60.7 3 6.6E-05 42.8 0.2 56 466-521 249-304 (309)
292 PF01733 Nucleoside_tran: Nucl 53.4 3.9 8.4E-05 42.0 -0.4 57 145-207 247-303 (309)
293 PF03219 TLC: TLC ATP/ADP tran 50.2 3.9E+02 0.0084 29.5 16.7 42 485-526 164-205 (491)
294 KOG1479 Nucleoside transporter 47.3 29 0.00063 36.9 4.9 127 53-204 264-395 (406)
295 PF07857 DUF1632: CEO family ( 46.8 94 0.002 30.9 8.1 29 496-524 74-102 (254)
296 KOG3574 Acetyl-CoA transporter 46.0 1E+02 0.0022 32.7 8.4 52 472-523 140-191 (510)
297 KOG3810 Micronutrient transpor 45.5 2E+02 0.0043 30.3 10.2 95 69-194 272-368 (433)
298 KOG4830 Predicted sugar transp 44.1 29 0.00063 34.5 3.9 64 37-102 22-94 (412)
299 PF07672 MFS_Mycoplasma: Mycop 41.3 1.8E+02 0.0038 29.1 9.0 81 74-173 147-231 (267)
300 PF09527 ATPase_gene1: Putativ 39.5 1.1E+02 0.0025 22.2 5.8 36 76-111 8-43 (55)
301 PRK10263 DNA translocase FtsK; 36.1 1.1E+02 0.0024 37.5 7.7 27 199-225 142-168 (1355)
302 PF13000 Acatn: Acetyl-coenzym 35.5 2.8E+02 0.0061 30.6 10.1 36 490-525 143-178 (544)
303 KOG3880 Predicted small molecu 30.4 38 0.00081 34.7 2.4 59 144-208 340-398 (409)
304 PF11947 DUF3464: Protein of u 30.4 91 0.002 28.4 4.6 31 166-202 114-144 (153)
305 PF06912 DUF1275: Protein of u 30.1 4.8E+02 0.01 24.7 14.4 43 74-117 52-97 (209)
306 PF11947 DUF3464: Protein of u 29.7 1.7E+02 0.0036 26.7 6.2 48 466-516 98-145 (153)
307 TIGR01667 YCCS_YHJK integral m 26.0 2.9E+02 0.0063 31.9 8.9 48 93-163 51-98 (701)
308 TIGR01666 YCCS hypothetical me 23.5 5.8E+02 0.013 29.6 10.6 52 89-163 44-98 (704)
309 KOG4830 Predicted sugar transp 22.1 41 0.00088 33.6 0.9 148 33-208 202-351 (412)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-44 Score=391.93 Aligned_cols=535 Identities=51% Similarity=0.835 Sum_probs=478.8
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHH
Q 007736 27 KTGGWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFA 106 (591)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~ 106 (591)
++..|++...++..+.+++.++|++..++..|+++.+|.+...+......+.....+.++.+++++|.|+||.+++.++.
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s 111 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS 111 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 77889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCC-CCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhc
Q 007736 107 TVQAAGVTILTISTIIPSLRPPKC-NLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQ 185 (591)
Q Consensus 107 ~~~~i~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 185 (591)
++..+|..++..+..+|.+.++-| ...|+-.|..+.......++.++.+.++|.|+..+...++.+|++++..+.++..
T Consensus 112 ~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~ 191 (571)
T KOG1237|consen 112 LISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKG 191 (571)
T ss_pred HHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhC
Confidence 999999999999999998888776 5667778999998899999999999999999999999999999999766666666
Q ss_pred cchhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhh
Q 007736 186 MTNFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRK 265 (591)
Q Consensus 186 r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (591)
+.+.++|+++..++|..++-.+..++++..||.+.|.++.++.++++++++...+.++.++|.++|.....+++..+.++
T Consensus 192 ~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~k 271 (571)
T KOG1237|consen 192 IPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAFK 271 (571)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHHH
Q 007736 266 RHLDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPI 345 (591)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (591)
++...+.++... +.. .......++++.++++|++....+.+. ++.....+|+++...++++.|..++.+++
T Consensus 272 ~~~~~~~~~~~~-~~~------~~~~~~~~~t~~f~~l~kaa~~~~~~~--~~~~~~~~w~lct~~~Vee~K~~lr~~Pi 342 (571)
T KOG1237|consen 272 RKAVVSLDPEEL-YYD------CTDSVAIEGTKPFRFLDKAALKTSDDL--KDGLDANPWRLCTVTQVEEVKAVLRLLPI 342 (571)
T ss_pred HhccCCCcchhc-ccc------ccccccccCCcccchhhHhhccCCccc--ccccccCCccCCCceehhhhhhhhhhhHH
Confidence 999888765444 110 112222345678889999988866544 33345688999999999999999999999
Q ss_pred HHHHHHHHHHhccccceeeeeeccccccccc-cccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHH
Q 007736 346 WATTIIFWTVYAQMTTFSVSQATTMNRHIGS-FEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIG 424 (591)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~ 424 (591)
|...+.+++.+.|+.+.+..|...|++++++ +.+|++.+.....+..++..|+.+++..|+.||..+++.+...+.++.
T Consensus 343 ~~~~i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~~t~lqrig 422 (571)
T KOG1237|consen 343 WLTTIIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFGITPLQRIG 422 (571)
T ss_pred HHHHHHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCCCChhheee
Confidence 9999999999999999999999999999987 999999999999999999999999999999999888766789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHH
Q 007736 425 VGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTG 504 (591)
Q Consensus 425 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g 504 (591)
+|+++..+++...+..+.+|.+.... +.+...+++.+|++++++++|+++.+...+..++..+.+|++||+.+++
T Consensus 423 ~G~~~si~sm~~aa~vE~krl~~~~~-----~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~a 497 (571)
T KOG1237|consen 423 IGLVLSILSMAVAGIVEAKRLKTAVS-----LLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATA 497 (571)
T ss_pred ccchHHHHHHHHHHHHHHHHhhhhhh-----ccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHH
Confidence 99999999999999999888876543 1111157999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCCCccc-cccCCcchHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Q 007736 505 LFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLA-DNLNQGRLYDFYWLLAILSALNFVIYLAFARWYVYKDKR 575 (591)
Q Consensus 505 l~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~-~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~~~~ 575 (591)
++.+..++|+.++..++..+...++...+|++ +++|.++.+.+||+++....+....+..+.++++.++.+
T Consensus 498 l~l~t~a~G~~lss~Lv~~v~~~t~~~~~w~~~~~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y~~~~~~ 569 (571)
T KOG1237|consen 498 LWLLTVAVGNYLSSVLVSLVQFSTGKAAEWLGFANLNKGRLDYFYWLLAVYSAVNFLYFLICAKRYDYKDDK 569 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcccCChhHhhhhHHHHHHHHHHHHHhhhhhheEEEEEeeeecccc
Confidence 99999999999999999999876533357999 999999999999999999999998888888777766543
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=8.8e-37 Score=317.59 Aligned_cols=468 Identities=23% Similarity=0.312 Sum_probs=354.3
Q ss_pred CCcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC----CChHHHHHHHHHHHHHHHHHHhhhHHHhhhhch
Q 007736 22 PAERSKTGGWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMH----LGNASAANTVTNFLGTSFMLCLLGGFIADTFLG 97 (591)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~G 97 (591)
+.++...+++|.++.++..+++|+++||++...+..|++.+++ +|.+++.-+.+.|...-.+.++++||++||++|
T Consensus 11 ~~~~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG 90 (498)
T COG3104 11 TLEMKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLG 90 (498)
T ss_pred ccccccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3344556689999999999999999999999999999998888 999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCC
Q 007736 98 RYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDD 177 (591)
Q Consensus 98 rk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 177 (591)
+||++..+.++.++|.++++.+.. .....++++.++.++|.|.+.+++.++++|++|+
T Consensus 91 ~~~tI~lGail~~iGh~~L~~~~~----------------------~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~ 148 (498)
T COG3104 91 TRRTIVLGAILMAIGHLVLAISSV----------------------SGPGGLYIGLALIIVGTGLFKPNISSLLGELYPK 148 (498)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccc----------------------ccccHHHHHHHHHHhccccccccHHHHHHHhcCC
Confidence 999999999999999999987520 2566789999999999999999999999999999
Q ss_pred CChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeecc--CCCChhh--
Q 007736 178 SDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKK--LVGSPLT-- 253 (591)
Q Consensus 178 ~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-- 253 (591)
++++ |..++++++++.|+|+.++|++.+++.+.+||...|.+.++.+.++++.+++.+++..... ++..|.+
T Consensus 149 ~Dpr----rD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~ 224 (498)
T COG3104 149 DDPR----RDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFN 224 (498)
T ss_pred CCcc----cCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhh
Confidence 9976 9999999999999999999999999999999999999999999999999988887654432 2222111
Q ss_pred ----HHHHHHHHHHhhcccCCCCCCCCcccccCCccccccccccCCCCcchhhhHHhhhcc-CCCCCccccccccccccC
Q 007736 254 ----QIASVFVVAWRKRHLDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFK-DSDMSNSTTVVINKWNLA 328 (591)
Q Consensus 254 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 328 (591)
.....+......- +.. +...+..+......... ....- .+...|
T Consensus 225 ~~~~~~~~~~~~~~~~~----------~~~--------------~l~~~~~~~~~~~~~i~~~~~~~----~~~~~~--- 273 (498)
T COG3104 225 FLLPVLGGLVVMILAAL----------LTL--------------LLNQNTFSGVLLVISILIAIIYF----AEAFRS--- 273 (498)
T ss_pred hhhhhHHHHHHHHHHHH----------HHH--------------HHHHHHHHHHHHHHHHHHHHHHH----HHHhcc---
Confidence 1111111111000 000 00000011100000000 00000 001111
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhccccceeeeee-ccccccccccccccccccccchhhhhhhhhhhhhhhhhhh
Q 007736 329 TLTDVEEVKMVIRMLPIWATTIIFWTVYAQMTTFSVSQA-TTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIA 407 (591)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 407 (591)
.+.. +++|+++..++++.+.++||+.+.|+++.+..+. ...++++.++++|+++.+++|++.+++++|+.++++.|+.
T Consensus 274 ~~~~-~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~ 352 (498)
T COG3104 274 PKVF-DERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLG 352 (498)
T ss_pred CccH-HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhh
Confidence 2223 6788999999999999999999999998665543 4555564568999999999999999999999999998877
Q ss_pred hhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhh
Q 007736 408 RKVFKTPQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQL 487 (591)
Q Consensus 408 ~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~ 487 (591)
++.. .++...++.+|+.++..+++++....... | +++ ...+.+|++..++++++||.+..|...
T Consensus 353 ~~~~----~ps~~~KFalGl~l~g~~fl~l~~~~~~~-------~---~~~--~~~s~~~lil~y~l~s~gEL~iSpvGL 416 (498)
T COG3104 353 RGNK----QPSTPIKFALGLILAGLGFLILLLAGIWF-------G---GPS--GLVSVWWLVLSYVLQSFGELFISPVGL 416 (498)
T ss_pred cCCC----CCCcchHHHHHHHHHHHHHHHHHHHHHhh-------c---CCC--CCcCHHHHHHHHHHHHHHHHHhCHHHH
Confidence 6642 27888999999999999999888753211 1 000 467999999999999999999999999
Q ss_pred eeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 007736 488 DFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFAR 567 (591)
Q Consensus 488 ~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~ 567 (591)
+++++.+|+.+.+..+|++.++...+..++..+.+...... . ..+......+|+..+...++.........+
T Consensus 417 s~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~----~----~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~ 488 (498)
T COG3104 417 SMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTD----P----AYTAFIEGRVFGTIGVVAIVIGILLLLLSP 488 (498)
T ss_pred HHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccc----h----hhhhhhhhhhHHHHHHHHHHHHHHHHHhhH
Confidence 99999999999999999999999999999888877322100 0 001111234677777777777666666655
Q ss_pred hccc
Q 007736 568 WYVY 571 (591)
Q Consensus 568 ~~~~ 571 (591)
+.++
T Consensus 489 ~~~r 492 (498)
T COG3104 489 KLNR 492 (498)
T ss_pred HHHH
Confidence 5443
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=2.7e-35 Score=321.12 Aligned_cols=464 Identities=18% Similarity=0.247 Sum_probs=330.5
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHH
Q 007736 25 RSKTGGWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAI 104 (591)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~ 104 (591)
...++++|.++.+++.+++++.++|++..+++.|+++++|++..+..++.+.+.....+..+++|+++||++||||++.+
T Consensus 7 ~~~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~ 86 (489)
T PRK10207 7 MGLLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVL 86 (489)
T ss_pred cchhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHH
Confidence 34457899999999999999999999999999999999999999999999999999999999999999994499999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhh
Q 007736 105 FATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERN 184 (591)
Q Consensus 105 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 184 (591)
+.++++++.++++++.. ....++++|+++++|.|...|+..++++|++|+++++
T Consensus 87 g~~~~~~g~~~~~~~~~-----------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~--- 140 (489)
T PRK10207 87 GAIVLAIGYFMTGMSLL-----------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPR--- 140 (489)
T ss_pred HHHHHHHHHHHHHHhcc-----------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchh---
Confidence 99999999999988621 2234567899999999999999999999999988632
Q ss_pred ccchhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeec--cCCCChhhHHHHHH---
Q 007736 185 QMTNFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFK--KLVGSPLTQIASVF--- 259 (591)
Q Consensus 185 ~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--- 259 (591)
|.+++++++++.|+|..+||.+++++.++.||++.|++..+..+++++.+....+..++. ++++++.+.....+
T Consensus 141 -~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~ 219 (489)
T PRK10207 141 -LDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLL 219 (489)
T ss_pred -hhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHH
Confidence 688999999999999999999999999999999999998766665555555544333222 22222211101000
Q ss_pred -----HHHHhhcccCCCCCCCCcccccCCccccccccccCCCCcchhh-hHHhhhccCCCCCccccccccccccCccchh
Q 007736 260 -----VVAWRKRHLDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRF-LDKAAIFKDSDMSNSTTVVINKWNLATLTDV 333 (591)
Q Consensus 260 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (591)
...... ..+. ...... .......... ..-++....+.
T Consensus 220 ~~~~~~~~~~~-~~~~--------------------------~~~~~~~~~~~~~i~~~---------~f~~~~~~~~~- 262 (489)
T PRK10207 220 GSVVMIFVCAW-LMHN--------------------------VEVANLVLIVLSIVVTI---------IFFREAFKLDK- 262 (489)
T ss_pred HHHHHHHHHHH-HHhh--------------------------hhHHHHHHHHHHHHHHH---------HHHHHHhcCCH-
Confidence 000000 0000 000000 0000000000 00000001112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccceeeeeec-cccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcC
Q 007736 334 EEVKMVIRMLPIWATTIIFWTVYAQMTTFSVSQAT-TMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFK 412 (591)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~ 412 (591)
..+++......++....++|..+.|..+.+..+.+ .++.+..++.++++.+.++|++..++..|+.+++.+|+.+|..
T Consensus 263 ~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~- 341 (489)
T PRK10207 263 TGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGK- 341 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCC-
Confidence 23444555666677788899999998664443332 4555566778888889999999998999999988877766532
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecc
Q 007736 413 TPQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLR 492 (591)
Q Consensus 413 ~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~ 492 (591)
.+++..++.+|+++++++++.+....... . ..+ ...+.+|+++.+++.++||.+..|..++++.+
T Consensus 342 ---~~~~~~k~~~G~~l~~~~~~~~~~~~~~~---~------~~~---~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~ 406 (489)
T PRK10207 342 ---DLSMPMKFTLGMFLCSLGFLTAAAAGMWF---A------DAQ---GLTSPWFIVLVYLFQSLGELFISALGLAMIAA 406 (489)
T ss_pred ---CCCcHHHHHHHHHHHHHHHHHHHHHHHhh---c------CCC---CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 26888899999999999987765432100 0 000 23577888999999999999999999999999
Q ss_pred cCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 007736 493 ECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWYVYK 572 (591)
Q Consensus 493 ~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~ 572 (591)
.+|++++|.++|++++.+++|+.+|..+.+.........++. ...+++..+|..+++.+++..+++++..++.++.
T Consensus 407 ~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~----~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~ 482 (489)
T PRK10207 407 LVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPL----ETLPVYTNVFGKIGLVTLGVAVVMALMVPWLNRM 482 (489)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccch----hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999987663211000111 0112345678888888888777777766655544
No 4
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=4.1e-34 Score=311.47 Aligned_cols=452 Identities=18% Similarity=0.251 Sum_probs=329.1
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--cCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHH
Q 007736 28 TGGWTSAAMILGGEACERLTTLGIAVNLVTYLTGT--MHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIF 105 (591)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~ 105 (591)
.++++.++.+++.+++++.++|++.++++.|++++ +|++..+.+++.+.+.+++.++++++|+++||++|||+++.++
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~ 85 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLG 85 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHH
Confidence 45778899999999999999999999999999987 9999999999999999999999999999999944999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhc
Q 007736 106 ATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQ 185 (591)
Q Consensus 106 ~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 185 (591)
.++.+++.++++++ .+...+++++++.|+|.|...++..++++|++|+++.+ +
T Consensus 86 ~~~~~~g~~~~~~~------------------------~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~---~ 138 (475)
T TIGR00924 86 GIVLMLGHFMLAMS------------------------IYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMP---R 138 (475)
T ss_pred HHHHHHHHHHHHhc------------------------ccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcc---c
Confidence 99999999888875 35667788999999999999999999999999876421 1
Q ss_pred cchhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhH----HHH----
Q 007736 186 MTNFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQ----IAS---- 257 (591)
Q Consensus 186 r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---- 257 (591)
|++++++++++.|+|+.+||.+++++.+++||++.|++.++..+++.+.+....+..++.++++++.+. ..+
T Consensus 139 r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (475)
T TIGR00924 139 RDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLA 218 (475)
T ss_pred ccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHH
Confidence 888999999999999999999999999999999999998876666666555554443322221111100 000
Q ss_pred ---HHHHHHhhcccCCCCCCCCcccccCCccccccccccCCCCcchhh-hHHhhhccCCCCCccccccccccccCccchh
Q 007736 258 ---VFVVAWRKRHLDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRF-LDKAAIFKDSDMSNSTTVVINKWNLATLTDV 333 (591)
Q Consensus 258 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (591)
.+....+.... .... ...+.... ............ ..++ ..++
T Consensus 219 ~~~~~~~~~~~~~~-~~~~---------------------~~~~~~~~~~~~~~~~~~~~~------~~~~----~~~~- 265 (475)
T TIGR00924 219 LLAALALVFFCAWL-MHHV---------------------VIANILLMTVTLAVIIFFFRL------AFKP----RLDA- 265 (475)
T ss_pred HHHHHHHHHHHHHH-Hhcc---------------------HHHHHHHHHHHHHHHHHHHHH------HHhc----cCCH-
Confidence 00000000000 0000 00000000 000000000000 0000 0112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccceeee-eeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcC
Q 007736 334 EEVKMVIRMLPIWATTIIFWTVYAQMTTFSVS-QATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFK 412 (591)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~ 412 (591)
.++++....+.+++..+++|+.+.|+.+.+.. +...++.+++++.+|++.+.++|.+.++++.|+.+++..++.||..
T Consensus 266 ~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~- 344 (475)
T TIGR00924 266 VARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGK- 344 (475)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCC-
Confidence 23344455778888899999999999875433 3345677777888999999999999999999999987766655522
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecc
Q 007736 413 TPQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLR 492 (591)
Q Consensus 413 ~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~ 492 (591)
..+...++.+|+++.+++++.+++... ..+ ++ .+.+++|+++.+++.++||.+..|..++++.+
T Consensus 345 ---~~~~~~k~~~G~~l~~~~~~~~~~~~~----~~~-~~--------~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~ 408 (475)
T TIGR00924 345 ---DPTTPLKFTLGMLFCGASFLTFAASIW----FAD-AG--------GLTSPWFMVLIYLFQTLGELMISPLGLSWWTK 408 (475)
T ss_pred ---CCCcHHHHHHHHHHHHHHHHHHHHHHh----hcC-CC--------CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 256667889999999999988876421 000 00 25689999999999999999999999999999
Q ss_pred cCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 007736 493 ECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWYV 570 (591)
Q Consensus 493 ~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~ 570 (591)
.+|+++||+++|++.+...+|..+++.+.+...... + ...+|...++.+++..++.++..+..+
T Consensus 409 ~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~----~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (475)
T TIGR00924 409 IAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQ----G----------VTGVFGKIGLVTLLVGVVMALMVPWLN 472 (475)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----c----------hhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988664321 1 234666777777777776666666544
No 5
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=2.3e-33 Score=302.25 Aligned_cols=417 Identities=18% Similarity=0.251 Sum_probs=308.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHH
Q 007736 29 GGWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATV 108 (591)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~ 108 (591)
++++.++.+++.+++++.++|++..+++.|+++.+|++..+.+.+.+.+.....++++++|+++||++||||++.++.++
T Consensus 6 ~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il 85 (493)
T PRK15462 6 SQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALL 85 (493)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHH
Confidence 37888999999999999999999999999999999999999999999999999999999999999977999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccch
Q 007736 109 QAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTN 188 (591)
Q Consensus 109 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 188 (591)
.+++.++++... .+...++++..+.++|.|...++..++++|++|+++++ |.+
T Consensus 86 ~~lg~lll~~~~-----------------------~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~----R~s 138 (493)
T PRK15462 86 MAIGHVVLGASE-----------------------IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPR----RDG 138 (493)
T ss_pred HHHHHHHHHHhh-----------------------cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcc----ccc
Confidence 999987766431 11223445555666788888888899999999987433 999
Q ss_pred hhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccC-CCChhh--HHHHH-----HH
Q 007736 189 FFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKL-VGSPLT--QIASV-----FV 260 (591)
Q Consensus 189 ~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~-----~~ 260 (591)
++++++...|+|+.++|.+++++.+.+||++.|.++++.++++++.++...+...+... +++|.+ ..... ..
T Consensus 139 gf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (493)
T PRK15462 139 GFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLV 218 (493)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999887777777666655544322110 111111 00000 00
Q ss_pred HH-----HhhcccCCCCCCCCcccccCCccccccccccCCCCcchhh-hHHhhhccCCCCCccccccccccccCccchhH
Q 007736 261 VA-----WRKRHLDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRF-LDKAAIFKDSDMSNSTTVVINKWNLATLTDVE 334 (591)
Q Consensus 261 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (591)
.. +..... . .+.... +......... . ...-.+ ...+.+
T Consensus 219 ~~~~~~~~~~~~~--------------------------~-~~~~~~~~~~~~~~~~~-~------~~~~~~--~~~~~~ 262 (493)
T PRK15462 219 LLVATPALITVLF--------------------------W-KEWSVYALIVATIIGLG-V------LAKIYR--KAENQK 262 (493)
T ss_pred HHHHHHHHHHHHH--------------------------H-HHHHHHHHHHHHHHHHH-H------HHHHHH--hcCCHH
Confidence 00 000000 0 000000 0000000000 0 000000 011225
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccccceeeee-eccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCC
Q 007736 335 EVKMVIRMLPIWATTIIFWTVYAQMTTFSVSQ-ATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKT 413 (591)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~ 413 (591)
++|++...+.++...++||+.+.|.++.+... ..++|++++++++|+++..++|++.+++++|+..++..++.||
T Consensus 263 er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~---- 338 (493)
T PRK15462 263 QRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAG---- 338 (493)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcC----
Confidence 68888889999999999999999998744433 3578888899999999999999999999999999998665433
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeeccc
Q 007736 414 PQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRE 493 (591)
Q Consensus 414 ~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~ 493 (591)
++.++...|+.+|+++++++++++...... . +++ ...+.+|++..++++++||.+..|...+++.+.
T Consensus 339 ~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~----~-------~~~--~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~l 405 (493)
T PRK15462 339 NRTVRIWGKFALGLGLMSAGFCILTLSARW----S-------AMY--GHSSLPLMVLGLAVMGFAELFIDPVAMSQITRI 405 (493)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHhh----c-------CCC--CCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHh
Confidence 223678889999999999999888764311 0 111 247889999999999999999999999999999
Q ss_pred CCcchhHHHHHHHHHHH-HHHHHHHHHHHHHhh
Q 007736 494 CPKGMKTMSTGLFLSTL-SLGFFVSSLLVSLVH 525 (591)
Q Consensus 494 ~p~~~rg~~~gl~~~~~-~lg~~lg~~l~~~i~ 525 (591)
+|++.+|+.||++.... .+|+.+++.+.+...
T Consensus 406 aP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~ 438 (493)
T PRK15462 406 EIPGVTGVLTGIYMLLSGAIANYLAGVIADQTS 438 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999998754 788888887777663
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=7.1e-33 Score=303.54 Aligned_cols=460 Identities=18% Similarity=0.221 Sum_probs=324.2
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHH
Q 007736 26 SKTGGWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIF 105 (591)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~ 105 (591)
+..++++.++.+++.+++++.++|++..+++.|+++++|++.++.+++.+.+........+++|+++||++|||+++.++
T Consensus 15 ~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g 94 (500)
T PRK09584 15 NAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLG 94 (500)
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 33467778999999999999999999999999999999999999999888887777777789999999944999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhc
Q 007736 106 ATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQ 185 (591)
Q Consensus 106 ~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 185 (591)
.++.+++..+++++. .+...+.++++++++|.|...+...++++|++|+++++
T Consensus 95 ~~~~~ig~~l~~~~~-----------------------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~---- 147 (500)
T PRK09584 95 AIVLAIGYALVAWSG-----------------------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPR---- 147 (500)
T ss_pred HHHHHHHHHHHHHhc-----------------------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchh----
Confidence 999999988887752 13455678899999999999999999999999876532
Q ss_pred cchhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeec--cCCCChhhHH--H----H
Q 007736 186 MTNFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFK--KLVGSPLTQI--A----S 257 (591)
Q Consensus 186 r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~----~ 257 (591)
|.+++++++++.++|+.+||.+++++.+++||++.|++.++..+++.+.++...+..+++ ++++++.+.. . .
T Consensus 148 ~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (500)
T PRK09584 148 LDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVG 227 (500)
T ss_pred hhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHH
Confidence 567889999999999999999999999999999999998876666655544433322221 1211111110 0 0
Q ss_pred HHHHHH-hhcccCCCCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHH
Q 007736 258 VFVVAW-RKRHLDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEV 336 (591)
Q Consensus 258 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (591)
...... .......++. .............. .. .... ...++ .++
T Consensus 228 ~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~-~~--------~~~~---~~~~~-~~~ 272 (500)
T PRK09584 228 VVALIAIATWLLHNQEI----------------------ARMALGVVALGIVV-IF--------GKEA---FAMKG-AAR 272 (500)
T ss_pred HHHHHHHHHHHHhcchH----------------------HHHHHHHHHHHHHH-HH--------HHHH---hhcCH-HHH
Confidence 000000 0000000000 00000000000000 00 0000 01112 345
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccceeeeee-ccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCC
Q 007736 337 KMVIRMLPIWATTIIFWTVYAQMTTFSVSQA-TTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQ 415 (591)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~ 415 (591)
++.+..+.++...+++|+.+.|+++.+..+. ...+.++.++.++++.+.++|.+..++..|+.++...|+.+|
T Consensus 273 ~~~~~~~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r------ 346 (500)
T PRK09584 273 RKMIVAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDR------ 346 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcC------
Confidence 5555667777888999999999998766543 234555667788899999999999999999999887555444
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCC
Q 007736 416 GLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECP 495 (591)
Q Consensus 416 ~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p 495 (591)
.++.+++.+|+++++++++.+..... ..+.+ ...+.+|+++.+++.++||.+..|...+++.+.+|
T Consensus 347 -~~~~~~~~~G~~l~~l~f~~l~~~~~----~~~~~---------~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP 412 (500)
T PRK09584 347 -LPMPHKFAIGMVLCSGAFLVLPLGAK----FANDA---------GIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVP 412 (500)
T ss_pred -CCcHHHHHHHHHHHHHHHHHHHHHHH----hcCCC---------CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCc
Confidence 45678999999999999999876531 11111 24677889999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcccccc-CCcchHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 007736 496 KGMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNL-NQGRLYDFYWLLAILSALNFVIYLAFARWYVYK 572 (591)
Q Consensus 496 ~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~-~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~ 572 (591)
+++||+.+|++.+...+|+.+++.+.+...... -..|.. ..+.+..+|..+++.+++..++++...++.++.
T Consensus 413 ~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k~ 485 (500)
T PRK09584 413 QRLMGFIMGSWFLTTAGAALIAGYVANLMAVPD-----NVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAPKLNRM 485 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-----ccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998899998888876543110 000100 112244677777777776666666666655544
No 7
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.94 E-value=1.1e-24 Score=232.21 Aligned_cols=376 Identities=14% Similarity=0.068 Sum_probs=249.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHH
Q 007736 29 GGWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATV 108 (591)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~ 108 (591)
+.++++..+.+..+...++.....+.+|.|+++++|.+..+.+++.+.+.++..+++++.|+++||+ ||||++..+.++
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~ 90 (399)
T PRK05122 12 RLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCG 90 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHH
Confidence 4456788888889999999999999999999999999999999999999999999999999999998 999999999998
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccch
Q 007736 109 QAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTN 188 (591)
Q Consensus 109 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 188 (591)
.+++...+.++..... ....+...+++.|+++|++.+...+...+++.|.+|+++ |++
T Consensus 91 ~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~ 148 (399)
T PRK05122 91 CALSGLLYLLAGLLAA----------------WPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH------TGR 148 (399)
T ss_pred HHHHHHHHHHhhhhhc----------------cchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh------hcc
Confidence 8887776655421110 000256678999999999999999998899999999998 999
Q ss_pred hhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhccc
Q 007736 189 FFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHL 268 (591)
Q Consensus 189 ~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (591)
+.++.....++|..++|.+++.+.+..||+..+++..+..++..+ ...+. +++++++++
T Consensus 149 ~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~----------------- 207 (399)
T PRK05122 149 VISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLL---LARPR-PAVPPVKGE----------------- 207 (399)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH---HHhcC-CCCCCCCcc-----------------
Confidence 999998999999999999999999989999888766554332222 11111 111000000
Q ss_pred CCCCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHH-HHHHH
Q 007736 269 DLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRM-LPIWA 347 (591)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 347 (591)
+ .++ .+..|..... ....+
T Consensus 208 ----------------------------~-------------------------~~~-------~~~~~~~~~~~~~~~~ 227 (399)
T PRK05122 208 ----------------------------R-------------------------LPF-------RRVLGRVWPYGMGLAL 227 (399)
T ss_pred ----------------------------c-------------------------hhH-------HHHHHHHHHHHHHHHH
Confidence 0 000 0000111110 00111
Q ss_pred HHHHHHHHhccccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHH
Q 007736 348 TTIIFWTVYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGL 427 (591)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~ 427 (591)
....+.......+.++... +.. ..........+..++..++.+++.+|..+ ++.+..+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~--~~~--------~~~~~~~~~~~~~~~~~~~~g~l~~r~~~-----------~~~~~~~~ 286 (399)
T PRK05122 228 ASIGFGTIATFITLYYAAR--GWD--------GAALALTLFGVAFVGARLLFGNLINRLGG-----------LRVAIVSL 286 (399)
T ss_pred HHHHHHHHHHHHHHHHHHc--ccc--------cchHHHHHHHHHHHHHHHHHHHHHHHhcc-----------HHHHHHHH
Confidence 1111111111111111110 110 01111222233334444555555533322 24466677
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHH
Q 007736 428 VLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFL 507 (591)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~ 507 (591)
.+.+++++.+... .+.+.+++..++.|++.+...|.....+.+..|++.||+++|+++
T Consensus 287 ~~~~~~~~~~~~~----------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 344 (399)
T PRK05122 287 LVEILGLLLLWLA----------------------PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYS 344 (399)
T ss_pred HHHHHHHHHHHHh----------------------ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 7777776655542 133444566788888888888887777888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 007736 508 STLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAF 565 (591)
Q Consensus 508 ~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~ 565 (591)
....+|..+++.+.+.+.+..+ ++..|++.++.++++.++.+++
T Consensus 345 ~~~~~g~~~~~~~~g~l~~~~g--------------~~~~~~~~~~~~~~~~~~~~~~ 388 (399)
T PRK05122 345 VFLDLSLGITGPLAGLVASWFG--------------YPSIFLAAALAALLGLALTWLL 388 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC--------------HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998875321 3456777777777766555443
No 8
>PRK03545 putative arabinose transporter; Provisional
Probab=99.94 E-value=4.8e-25 Score=234.58 Aligned_cols=374 Identities=12% Similarity=0.093 Sum_probs=243.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHH
Q 007736 30 GWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQ 109 (591)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~ 109 (591)
+|..++.+.+..++.....+...+.+| .+.+++|.+..+.+++.+.+.+++.++.++.|+++||+ ||||++..+.++.
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~ 84 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLLS-DIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLF 84 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcchH-HHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHH
Confidence 354566666666665555554434444 56778999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchh
Q 007736 110 AAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNF 189 (591)
Q Consensus 110 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 189 (591)
+++.+++.++ ++.+.+++.|+++|++.+...+...+++.|++|+++ |+++
T Consensus 85 ~~~~~~~~~~------------------------~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~ 134 (390)
T PRK03545 85 IASHVLSALA------------------------WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK------KAQA 134 (390)
T ss_pred HHHHHHHHHh------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh------hhhH
Confidence 9999988886 588899999999999999888889999999999998 9999
Q ss_pred hhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccC
Q 007736 190 FNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLD 269 (591)
Q Consensus 190 ~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (591)
+++...+.++|..++|.+++.+.+.+||++.|++.++..++..+......++.+++ ++++.+
T Consensus 135 ~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~---------------- 196 (390)
T PRK03545 135 LSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSE--HSGSLK---------------- 196 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCC--CcchHH----------------
Confidence 99999999999999999999999989999999988766555444333322221100 000000
Q ss_pred CCCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHH-HHHHHHH
Q 007736 270 LPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIR-MLPIWAT 348 (591)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 348 (591)
+... ....+.+.. ....+..
T Consensus 197 ----------------------------------~~~~-------------------------~~~~~~~~~~~~~~~~~ 217 (390)
T PRK03545 197 ----------------------------------SLPL-------------------------LFRRPALVSLYLLTVVV 217 (390)
T ss_pred ----------------------------------HHHH-------------------------HHhCcHHHHHHHHHHHH
Confidence 0000 000011111 1111112
Q ss_pred HHHHHHHhccccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHH
Q 007736 349 TIIFWTVYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLV 428 (591)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~ 428 (591)
....+..+++...+... ..+.+.. ..+.......+..+++..+.+++.+|..+ +.+.++..
T Consensus 218 ~~~~~~~~~~~~~~l~~-~~g~s~~------~~~~~~~~~~~~~~~g~~~~g~l~dr~~~------------~~~~~~~~ 278 (390)
T PRK03545 218 VTAHFTAYSYIEPFVQQ-VAGLSEN------FATLLLLLFGGAGIIGSVLFSRLGNRHPS------------GFLLIAIA 278 (390)
T ss_pred HHHHHHHHHHHHHHHHH-hcCCCcc------HHHHHHHHHHHHHHHHHHHHHHHhhccch------------hHHHHHHH
Confidence 22222222222222211 1111111 11222223333444444555544432221 23455555
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHH
Q 007736 429 LSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLS 508 (591)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~ 508 (591)
+..++...+... ..+.+.+++..++.|++.....+.....+.+..| +.|++++|+++.
T Consensus 279 ~~~~~~~~l~~~---------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 336 (390)
T PRK03545 279 LLLVCLLLLLPA---------------------ANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSG 336 (390)
T ss_pred HHHHHHHHHHHH---------------------hchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHH
Confidence 555554433322 1234444556677788877666766777778777 578999999999
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 007736 509 TLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFAR 567 (591)
Q Consensus 509 ~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~ 567 (591)
...+|..+|+.+.|++.+..+ +...|+..+.+.+++.++++...+
T Consensus 337 ~~~~g~~~G~~~~G~~~~~~g--------------~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 337 IFNIGIGAGALLGNQVSLHLG--------------LSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHHHHHHHHHHHHHHHhccC--------------hhHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999999999986432 345677777777777776666543
No 9
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.94 E-value=8.3e-25 Score=234.84 Aligned_cols=395 Identities=13% Similarity=0.058 Sum_probs=249.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAG 112 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 112 (591)
.+..++...++...+.......+|.+.+ +++.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++..+.+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~ 95 (417)
T PRK10489 18 AFRAVFIARFISIFGLGLLGVAVPVQIQ-MMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLG 95 (417)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHH
Confidence 3445566677777777766777777765 5678999999999999999999999999999998 9999999888877777
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhh
Q 007736 113 VTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNW 192 (591)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 192 (591)
.++++...... ..+.+.+++.|++.|++.+...+...+++.|.+|+++ |+++.++
T Consensus 96 ~~~~~~~~~~~-------------------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 150 (417)
T PRK10489 96 FIGLALNAFLP-------------------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN------LMQAGAI 150 (417)
T ss_pred HHHHHHHHHcC-------------------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH------HHHHHHH
Confidence 66654321100 0367778889999999988888888899999999988 9999999
Q ss_pred hHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccC-CCChhhHHHHHHHHHHhhcccCCC
Q 007736 193 FFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKL-VGSPLTQIASVFVVAWRKRHLDLP 271 (591)
Q Consensus 193 ~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 271 (591)
.+...++|..+||.+++.+.+..+|++.|++.++..++..+..+. .++.+.++. ++++.+
T Consensus 151 ~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~------------------ 211 (417)
T PRK10489 151 TMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLR-LPALPPPPQPREHPLR------------------ 211 (417)
T ss_pred HHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-CCCCCCCCcccccchH------------------
Confidence 999999999999999999998889999998877665554443322 222110000 000000
Q ss_pred CCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHHHHHHHHH
Q 007736 272 SDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPIWATTII 351 (591)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (591)
+.. ..++ ...+.+.+............
T Consensus 212 -----------------------------~~~-------------------~~~~-----~~~~~~~~~~~~~~~~~~~~ 238 (417)
T PRK10489 212 -----------------------------SLL-------------------AGFR-----FLLASPVVGGIALLGGLLTM 238 (417)
T ss_pred -----------------------------HHH-------------------HHHH-----HHHcChHHHHHHHHHHHHHH
Confidence 000 0000 00000111111111111111
Q ss_pred HHHHhccccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHH
Q 007736 352 FWTVYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSI 431 (591)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~ 431 (591)
......+.+.+. ....+.+.. ..+.+.....++.+++..+.+++. +|. .+.+.+..+.++.+
T Consensus 239 ~~~~~~~~p~~~-~~~~g~~~~------~~g~~~~~~~~g~~ig~~~~~~l~----~~~-------~~~~~l~~~~~~~~ 300 (417)
T PRK10489 239 ASAVRVLYPALA-DEVWQMGAA------QIGLLYAAVPLGAALGALTSGWLA----HSA-------RPGLLMLLSTLGSF 300 (417)
T ss_pred HHhHHHhhHHHH-HhccCCChh------HhHHHHHHHHHHHHHHHHHHHHhh----hcc-------CcchHHHHHHHHHH
Confidence 111111221111 111111110 112222233333444444444333 331 12234566777777
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHH
Q 007736 432 FAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLS 511 (591)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~ 511 (591)
++++.+... .+.+.+....++.|++.+...+..++++.+..|++.||+++|+++....
T Consensus 301 ~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 358 (417)
T PRK10489 301 LAVGLFGLM----------------------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNV 358 (417)
T ss_pred HHHHHHHcc----------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 666655432 2344445566777888887777778889999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccc
Q 007736 512 LGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWYVYKDKRLAEEG 580 (591)
Q Consensus 512 lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 580 (591)
+|..+|+.+.|++.+..+ ....++..++..++..++.+...+++|+++++|++++
T Consensus 359 ~g~~~g~~l~G~l~~~~g--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (417)
T PRK10489 359 TGDAIGAALLGGLGAMMT--------------PVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEVD 413 (417)
T ss_pred hhHhHHHHHHHHHHHHhc--------------hhhHHHHHHHHHHHHHHHHHHhcccccccccccccCC
Confidence 999999999999986432 2235555666666666666666777777777665543
No 10
>PRK12382 putative transporter; Provisional
Probab=99.93 E-value=3.2e-24 Score=228.32 Aligned_cols=374 Identities=11% Similarity=0.078 Sum_probs=243.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQA 110 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~ 110 (591)
.+.++.+.+..++...+.....+.+|.|+.+++|+|..+.+++.+.+.+++.+++++.|+++||+ ||||++.++.+...
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~ 92 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACG 92 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHH
Confidence 44667777778888888888889999999999999999999999999999999999999999998 99999999988777
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhh
Q 007736 111 AGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFF 190 (591)
Q Consensus 111 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 190 (591)
++.+........+. ....+...++++|+++|++.+...+...+++.|.+|+++ |++++
T Consensus 93 ~~~~~~~~~~~~~~----------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~a~ 150 (392)
T PRK12382 93 LAGLAYLLAAILPV----------------SAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH------SGKVM 150 (392)
T ss_pred HHHHHHHhhhcccc----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc------cchhh
Confidence 66544332211110 001477889999999999999888888889999999998 99999
Q ss_pred hhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccCC
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLDL 270 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (591)
++...+.++|..++|.+++++.+.+||++.+.+..+..++.. ... ++.++++++++.
T Consensus 151 ~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~------------------- 207 (392)
T PRK12382 151 SWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAW---AFN-GTVRKVPAHAGE------------------- 207 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH---HHH-HhccCCCCCccc-------------------
Confidence 999999999999999999999888999987665544322221 111 111111110000
Q ss_pred CCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHH-HHHHHHH
Q 007736 271 PSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRM-LPIWATT 349 (591)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 349 (591)
.. +.. +..|.+... .......
T Consensus 208 --------------------------~~--~~~------------------------------~~~~~~~~~~~~~~l~~ 229 (392)
T PRK12382 208 --------------------------RP--SLW------------------------------SVVGLIWKPGLGLALQG 229 (392)
T ss_pred --------------------------Cc--hHH------------------------------HHHHHHHHhHHHHHHHH
Confidence 00 000 000000000 0011111
Q ss_pred HHHHHHhccccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHH
Q 007736 350 IIFWTVYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVL 429 (591)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~ 429 (591)
..+.....+.+.++.. .+.+ ..........+..++..++.+++.+|..+| +.+..+..+
T Consensus 230 ~~~~~~~~~~~~~~~~--~~~~--------~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~-----------~~~~~~~~~ 288 (392)
T PRK12382 230 VGFAVIGTFVSLYFAS--KGWA--------MAGFTLTAFGGAFVLMRVLFGWMPDRFGGV-----------KVAIVSLLV 288 (392)
T ss_pred HHHhHHHHHHHHHHHh--cCCc--------hhHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----------eehHHHHHH
Confidence 1111111111111111 0000 011112222333344555566655433322 335667777
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHH
Q 007736 430 SIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLST 509 (591)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~ 509 (591)
.+++++++... .+.+...+..++.+++.+...|.......+.+|++.||++.|+++..
T Consensus 289 ~~~~~~~~~~~----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 346 (392)
T PRK12382 289 ETVGLLLLWLA----------------------PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAF 346 (392)
T ss_pred HHHHHHHHHHc----------------------ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 77766655442 13334455667888888888888778888999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 007736 510 LSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAF 565 (591)
Q Consensus 510 ~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~ 565 (591)
..+|..+++.+.+++.+..+ +...|.+.++..+++.++.+.+
T Consensus 347 ~~~g~~ig~~~~g~l~~~~g--------------~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 347 QDIAYGVSGPLAGMLATSFG--------------YPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhC--------------chHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999886432 3346777777777666655443
No 11
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=7.2e-24 Score=219.15 Aligned_cols=377 Identities=14% Similarity=0.139 Sum_probs=268.7
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHH
Q 007736 28 TGGWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFAT 107 (591)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~ 107 (591)
+..|..++.+.+..|+...+=+.....+|. +.+++|.|..+.|+.++.|.++..++.++...++||+ .||++++..+.
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~-iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l~ 86 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPP-IAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLLA 86 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHHH
Confidence 345677888888888888887777776665 5679999999999999999999999999999999997 99999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccc
Q 007736 108 VQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMT 187 (591)
Q Consensus 108 ~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 187 (591)
++.++.++++++ +++..++++|++.|+..|.+++...++.++..|+++ |+
T Consensus 87 lFi~~n~l~alA------------------------p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~------~~ 136 (394)
T COG2814 87 LFIVSNLLSALA------------------------PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK------RG 136 (394)
T ss_pred HHHHHHHHHHHh------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------hh
Confidence 999999999998 699999999999999999999999999999999999 99
Q ss_pred hhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCC--ChhhHHHHHHHHHHhh
Q 007736 188 NFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVG--SPLTQIASVFVVAWRK 265 (591)
Q Consensus 188 ~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 265 (591)
++.++.+.+..++..+|.+++.++.|.+|||..|++.+...++.++..+...| +.+.+.+ .+..+.
T Consensus 137 ~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~~~~~~~~~---------- 204 (394)
T COG2814 137 RALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEISGSLPGPLRTL---------- 204 (394)
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCCcchhHH----------
Confidence 99999999999999999999999999999999999998877777777666655 1111100 000000
Q ss_pred cccCCCCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHHH
Q 007736 266 RHLDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPI 345 (591)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (591)
++.. ++.+....+...
T Consensus 205 -----------------------------------------------------------~~~l-----~~p~v~~~l~~t 220 (394)
T COG2814 205 -----------------------------------------------------------LRLL-----RRPGVLLGLLAT 220 (394)
T ss_pred -----------------------------------------------------------HHHh-----cCchHHHHHHHH
Confidence 0000 011122233444
Q ss_pred HHHHHHHHHHhccccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHH
Q 007736 346 WATTIIFWTVYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGV 425 (591)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~ 425 (591)
.+.....+..|++..++..... +.+.+ ..........++.+++..+.+++.+| .+.+.+..
T Consensus 221 ~l~~~g~F~~ftYi~P~L~~v~-g~s~~------~vs~~Ll~~Gv~~~~Gn~~gGrl~dr------------~~~~~l~~ 281 (394)
T COG2814 221 FLFMTGHFALYTYIRPFLESVA-GFSVS------AVSLVLLAFGIAGFIGNLLGGRLADR------------GPRRALIA 281 (394)
T ss_pred HHHHcchhhhHHhHHHHHHHcc-CCCHh------HHHHHHHHHHHHHHHHHHHHhhhccc------------cchhHHHH
Confidence 4555556666666655443322 11111 11233334445555555666655543 11134555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHH
Q 007736 426 GLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGL 505 (591)
Q Consensus 426 g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl 505 (591)
...+.++.++.+.+.. .+.+..++..++.+++........+....+.. ++.++.++++
T Consensus 282 ~~~l~a~~~l~l~~~~---------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p~~~~~a~sl 339 (394)
T COG2814 282 ALLLLALALLALTFTG---------------------ASPALALALLFLWGFAFSPALQGLQTRLARLA-PDAADLAGSL 339 (394)
T ss_pred HHHHHHHHHHHHHHhc---------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-CCchHHHHHH
Confidence 6677777777666542 23344444555555555555555555555544 4669999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 007736 506 FLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFAR 567 (591)
Q Consensus 506 ~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~ 567 (591)
+....++|..+|..++|.+.+..+ +....++.+++.+++.+..+...+
T Consensus 340 ~~aa~nlgia~GA~lGG~v~~~~g--------------~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 340 NVAAFNLGIALGAALGGLVLDALG--------------YAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc--------------hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999987532 334566677777777665555443
No 12
>PRK10504 putative transporter; Provisional
Probab=99.93 E-value=5.3e-24 Score=232.26 Aligned_cols=179 Identities=12% Similarity=0.052 Sum_probs=155.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQA 110 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~ 110 (591)
.+.+|.+.+..++.....+.+.+++|.+.+ ++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 86 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFT 86 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 446788888889999899988998888875 6999999999999999999999999999999998 99999999988888
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhh
Q 007736 111 AGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFF 190 (591)
Q Consensus 111 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 190 (591)
++.+++.++ .+...++++|+++|++.+...+...+++.|.+|+++ |+++.
T Consensus 87 ~~~~~~~~~------------------------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 136 (471)
T PRK10504 87 LGSLFCALS------------------------GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQ------YMAAM 136 (471)
T ss_pred HHHHHHHHh------------------------CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH------HHHHH
Confidence 888877765 477788899999999999999999999999999888 99999
Q ss_pred hhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCc
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRR 241 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 241 (591)
++.+...++|..++|.+++++.++.||++.|++......++.+......++
T Consensus 137 ~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 137 TFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999998876655555444444343
No 13
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.93 E-value=5.3e-24 Score=227.52 Aligned_cols=359 Identities=12% Similarity=0.056 Sum_probs=234.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHH
Q 007736 29 GGWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATV 108 (591)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~ 108 (591)
++|..+...+...+++.+..+......|.. .+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 89 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAPRM-AQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVAL 89 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHH
Confidence 455566666677777777776666555544 567999999999999999999999999999999998 999999999988
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccch
Q 007736 109 QAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTN 188 (591)
Q Consensus 109 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 188 (591)
..++.+++.+. .+...+++.|++.|++.+...+...+++.|++|+++ |++
T Consensus 90 ~~~~~~~~~~~------------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~ 139 (406)
T PRK11551 90 FGLFSLATAQA------------------------WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL------RGT 139 (406)
T ss_pred HHHHHHHHHHh------------------------ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH------HHH
Confidence 88888777765 478888999999999999999999999999999998 999
Q ss_pred hhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhccc
Q 007736 189 FFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHL 268 (591)
Q Consensus 189 ~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (591)
++++++.+.++|..+++.+++.+.+..+|++.|++.+++.++..+......++.+..+++++..
T Consensus 140 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---------------- 203 (406)
T PRK11551 140 AVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAG---------------- 203 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcc----------------
Confidence 9999999999999999999988888899999998876554444433333333311110000000
Q ss_pred CCCCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHHHHHH
Q 007736 269 DLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPIWAT 348 (591)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (591)
+..+ .... ..+ ... +..+........+..
T Consensus 204 --------------------------~~~~--~~~~------------------~~~---~~~--~~~~~~~~~~~~~~~ 232 (406)
T PRK11551 204 --------------------------KQRA--PVLR------------------ALF---GEG--RATATLLLWISYFFT 232 (406)
T ss_pred --------------------------hhhh--hhHH------------------HHh---hhh--hhhHHHHHHHHHHHH
Confidence 0000 0000 000 000 011111111111122
Q ss_pred HHHHHHHhccccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHH
Q 007736 349 TIIFWTVYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLV 428 (591)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~ 428 (591)
....+....+.+.+... .+.+.. ..+.......+..+++..+.+++.+|..+| +.+.++.+
T Consensus 233 ~~~~~~~~~~~p~~~~~--~g~s~~------~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----------~~~~~~~~ 293 (406)
T PRK11551 233 LIVLYFLLNWLPSLLVG--QGLSRS------QAGLVQIAFNIGGALGSLLIGALMDRLRPR-----------RVVLLIYA 293 (406)
T ss_pred HHHHHHHHHHHHHHHHh--CCCChh------hhhHHHHHHHHHHHHHHHHHHHHHHHHhHH-----------HHHHHHHH
Confidence 22222332222222211 111111 122333334445555566666666554433 33444444
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHH
Q 007736 429 LSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLS 508 (591)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~ 508 (591)
..+++++.+... .+.+.+.+..++.+++.....+..+++..+.+|++.|++++|+.+.
T Consensus 294 ~~~~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~ 351 (406)
T PRK11551 294 GILASLAALAAA----------------------PSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVA 351 (406)
T ss_pred HHHHHHHHHHhc----------------------CcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHH
Confidence 444444443321 1233344455666777766777888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcc
Q 007736 509 TLSLGFFVSSLLVSLVHKV 527 (591)
Q Consensus 509 ~~~lg~~lg~~l~~~i~~~ 527 (591)
...++..+|+.+.|.+.+.
T Consensus 352 ~~~~g~~~g~~~~g~l~~~ 370 (406)
T PRK11551 352 VGRLGSMAGPLLAGQLLAL 370 (406)
T ss_pred hhhHHHHHHhhhHhhhhcc
Confidence 9999999999999988753
No 14
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.93 E-value=2.2e-24 Score=242.98 Aligned_cols=151 Identities=15% Similarity=0.158 Sum_probs=129.3
Q ss_pred HHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 007736 52 AVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCN 131 (591)
Q Consensus 52 ~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~ 131 (591)
...+.+++.+++|++..+.+++.+.+.++..++++++|+++||+ |||+++++++++.+++.++++++
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa------------ 252 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFV------------ 252 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHH------------
Confidence 33445566778999999999999999999999999999999998 99999999999999998888876
Q ss_pred CCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhh
Q 007736 132 LNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYI 211 (591)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l 211 (591)
.+.+.++++|++.|+|.++..+...++++|.+|++. |++.+++.+.+..+|.++++.++..+
T Consensus 253 ------------~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~------Rg~~~g~~~~~~~iG~ila~~la~~i 314 (742)
T TIGR01299 253 ------------QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK------RGEHLSWLCMFWMIGGIYAAAMAWAI 314 (742)
T ss_pred ------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478889999999999999999999999999999998 99999999999999999998876555
Q ss_pred ccc-------------cccchhHHHHHHHHHHHHH
Q 007736 212 QDN-------------LGREWGYGICACAIVFGLV 233 (591)
Q Consensus 212 ~~~-------------~g~~~~f~~~~~~~~~~~~ 233 (591)
... .+||+.+++.++..++.++
T Consensus 315 l~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll 349 (742)
T TIGR01299 315 IPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIG 349 (742)
T ss_pred HHhccchhccccccccccHHHHHHHHHHHHHHHHH
Confidence 432 3688888877765554443
No 15
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.93 E-value=7.3e-24 Score=226.36 Aligned_cols=168 Identities=15% Similarity=0.132 Sum_probs=151.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHH
Q 007736 35 AMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVT 114 (591)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~ 114 (591)
+.++...++...+.+.+.++++.|+++++|++..+.+++.+.+.+...+..+++|+++||+ |||+++.++.++.+++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 6777889999999999999999999999999999999999999999999999999999998 999999999999999998
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhH
Q 007736 115 ILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFF 194 (591)
Q Consensus 115 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 194 (591)
++... .+.+.+++.|+++|++.+...+...+++.|.+|+++ |+++.++.+
T Consensus 92 ~~~~~------------------------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~a~~~~~ 141 (400)
T PRK11646 92 TMAIA------------------------HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ------RGRFFSLLM 141 (400)
T ss_pred HHHHh------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHH
Confidence 88765 467788899999999998888888999999999988 999999999
Q ss_pred HHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHH
Q 007736 195 FFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVV 234 (591)
Q Consensus 195 ~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 234 (591)
...++|..+||.+++++. .+||++.|++.++..++..+.
T Consensus 142 ~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~ 180 (400)
T PRK11646 142 MQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAF 180 (400)
T ss_pred HHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998 679999999877655544433
No 16
>PRK10054 putative transporter; Provisional
Probab=99.93 E-value=3.9e-24 Score=228.06 Aligned_cols=174 Identities=14% Similarity=0.161 Sum_probs=152.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHH
Q 007736 30 GWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQ 109 (591)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~ 109 (591)
.+|+++.+.+..++...+++...++++.|+++++|++..+.+++.+.+.+++.++.++.|+++||+ |||+++.++.++.
T Consensus 5 ~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~~ 83 (395)
T PRK10054 5 LRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITAF 83 (395)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHHH
Confidence 456788899999999999999999999999999999999999999999999999999999999997 9999999999888
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchh
Q 007736 110 AAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNF 189 (591)
Q Consensus 110 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 189 (591)
+++.++..++ ++.+.+++.+.+.+.+.+...+...++..|.+|+++ |+++
T Consensus 84 ~~~~~~~~~~------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~ 133 (395)
T PRK10054 84 ASGFIAIPLV------------------------NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS------KTKI 133 (395)
T ss_pred HHHHHHHHHH------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH------HHHH
Confidence 8888877775 466677777888887777777888899999999888 9999
Q ss_pred hhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHH
Q 007736 190 FNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVF 235 (591)
Q Consensus 190 ~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 235 (591)
+++.+...++|..++|.+++++.+ .+|+.+|++.+++.+++.+..
T Consensus 134 ~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~ 178 (395)
T PRK10054 134 FSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFI 178 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999998875 799999998877666654443
No 17
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.93 E-value=2.6e-24 Score=235.04 Aligned_cols=433 Identities=12% Similarity=0.056 Sum_probs=244.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--------CCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTM--------HLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIA 103 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~--------~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~ 103 (591)
+..+...+..+...+....+...++. +++.+ +.+..+.+++.+.+.++..+++++.|+++||+ ||||++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~~ 89 (479)
T PRK10077 12 SITLVATLGGLLFGYDTAVISGTVES-LNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSLK 89 (479)
T ss_pred HHHHHHHHHHHhcCcccceehHhHHH-HHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHH
Confidence 34444444444444443333333332 34433 88999999999999999999999999999998 9999999
Q ss_pred HHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhh
Q 007736 104 IFATVQAAGVTILTISTII-PSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQE 182 (591)
Q Consensus 104 ~~~~~~~i~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 182 (591)
++.+++.++.+++++.... .... .........++++|+++|++.|+..+...++++|++|+++
T Consensus 90 ~~~~l~~i~~~~~~~~~~~~~~~~-------------~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~--- 153 (479)
T PRK10077 90 IAAVLFFISALGSAWPEFGFTSIG-------------PDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI--- 153 (479)
T ss_pred HHHHHHHHHHHHHHhhcccccccc-------------ccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh---
Confidence 9999998888877753110 0000 0011345678899999999999999999999999999999
Q ss_pred hhccchhhhhhHHHHhhchhhhhhhhhhhc--------cccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhH
Q 007736 183 RNQMTNFFNWFFFFISIGSLAAVTVLVYIQ--------DNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQ 254 (591)
Q Consensus 183 ~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~--------~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (591)
|++++++...+..+|..+++.+++.+. +.+|||+.|++.++..++..+.. +..++.++....++..++
T Consensus 154 ---rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~-~~l~~s~~~l~~~~~~~~ 229 (479)
T PRK10077 154 ---RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLL-YFVPETPRYLMSRGKQEQ 229 (479)
T ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHH-HcCCCCcHHHHHcCCHHH
Confidence 999999999999999999887665442 45799999998776655544333 333332211000010000
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhH
Q 007736 255 IASVFVVAWRKRHLDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVE 334 (591)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (591)
..+. .++.. + ..+.....+..... .+.+ . +
T Consensus 230 ~~~~----~~~~~-~--------------------------~~~~~~~~~~~~~~-----------~~~~-------~-~ 259 (479)
T PRK10077 230 AEGI----LRKIM-G--------------------------NTLATQALQEIKHS-----------LDHG-------R-K 259 (479)
T ss_pred HHHH----HHHHc-C--------------------------ChhHHHHHHHHHHH-----------HHHh-------h-h
Confidence 0000 00000 0 00000000000000 0000 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccccc-----ee-ee--eeccccccccccccccccccccchhhhhhhhhhhhhhhhhh
Q 007736 335 EVKMVIRMLPIWATTIIFWTVYAQMTT-----FS-VS--QATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPI 406 (591)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 406 (591)
..+..+..........+....+.+... ++ .. ...+.+.. ..........+..++..++..++.+|.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~------~~~~~~~~~~~~~~i~~~~~g~l~dr~ 333 (479)
T PRK10077 260 TGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTD------IALLQTIIVGVINLTFTVLAIMTVDKF 333 (479)
T ss_pred hhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCc------hHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 000000000000000000011111110 00 00 00011100 011122223333445555566666544
Q ss_pred hhhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHH-hhh
Q 007736 407 ARKVFKTPQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFT-YIG 485 (591)
Q Consensus 407 ~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~-~~~ 485 (591)
.|| +.+..+..+++++++.+..... ......+.+...++.+.+.... .|.
T Consensus 334 g~r-----------~~~i~~~~~~~v~~~~l~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (479)
T PRK10077 334 GRK-----------PLQIIGALGMAIGMFSLGTAFY------------------TQAPGIVALLSMLFYVAAFAMSWGPV 384 (479)
T ss_pred cCh-----------HHHHHhHHHHHHHHHHHHHHHh------------------cCcccHHHHHHHHHHHHHHhccccch
Confidence 433 5577788888888777765321 1112223333444455554443 366
Q ss_pred hheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 007736 486 QLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAF 565 (591)
Q Consensus 486 ~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~ 565 (591)
.+.++.|.+|++.|++++|+.+....++..+++.+.+.+.+ .+|+.|+... ...|++.++++++++++.+++
T Consensus 385 ~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~-----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 456 (479)
T PRK10077 385 CWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDK-----NSWLVAHFHN---GFSYWIYGCMGVLAALFMWKF 456 (479)
T ss_pred hHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHh-----ccchhhhccC---ccHHHHHHHHHHHHHHHHHhc
Confidence 78899999999999999999999999999999988876642 1333222211 235677777778887777777
Q ss_pred hhhccccccccccc
Q 007736 566 ARWYVYKDKRLAEE 579 (591)
Q Consensus 566 ~~~~~~~~~~~~~~ 579 (591)
.+++|+++.+|.++
T Consensus 457 ~~e~~~~~~~~~~~ 470 (479)
T PRK10077 457 VPETKGKTLEEMEA 470 (479)
T ss_pred cccCCCCCHHHHHH
Confidence 88888877665543
No 18
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.93 E-value=8.2e-24 Score=228.47 Aligned_cols=167 Identities=13% Similarity=0.064 Sum_probs=143.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAG 112 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 112 (591)
.++..++..++.....+.+...+|.+. +++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.+++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~ 101 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEML-ADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGII 101 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHH
Confidence 334444555555555556666666665 56999999999999999999999999999999998 9999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhh
Q 007736 113 VTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNW 192 (591)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 192 (591)
.++++++ .+.+.+++.|++.|++.|...+...+++.|++|+++ |++++++
T Consensus 102 ~~~~~~~------------------------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~------rg~~~~~ 151 (434)
T PRK11663 102 NILFGFS------------------------SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE------RGGWWAI 151 (434)
T ss_pred HHHHHHH------------------------hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH------HHHHHHH
Confidence 9888876 578888889999999999888999999999999998 9999999
Q ss_pred hHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHH
Q 007736 193 FFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFG 231 (591)
Q Consensus 193 ~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~ 231 (591)
++.+.++|..++|.+.+++.+.+||++.|++.++..++.
T Consensus 152 ~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~ 190 (434)
T PRK11663 152 WNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVV 190 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998877654433
No 19
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.92 E-value=1.3e-23 Score=219.76 Aligned_cols=359 Identities=12% Similarity=0.087 Sum_probs=235.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHH
Q 007736 36 MILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTI 115 (591)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l 115 (591)
.++...++...+.......+|.|.. +++.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~ 80 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAV 80 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHH
Confidence 3556677777777777778888876 5789999999999999999999999999999998 9999999999888888877
Q ss_pred HHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHH
Q 007736 116 LTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFF 195 (591)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 195 (591)
.......+ +.+.+.++++|+++|++.+...+...+++.|++|+++ |++++++.+.
T Consensus 81 ~~~~~~~~-------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 135 (365)
T TIGR00900 81 LPFVALLG-------------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ------LTQANSLSQA 135 (365)
T ss_pred HHHHHHcC-------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHhHHHH
Confidence 77652111 0278889999999999999999999999999999998 9999999999
Q ss_pred HHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccCCCCCCC
Q 007736 196 FISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLDLPSDPS 275 (591)
Q Consensus 196 ~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (591)
+.++|..++|.+++++.+..||++.|++.++..++..+..+....+.+.+ +++++.+
T Consensus 136 ~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---------------------- 192 (365)
T TIGR00900 136 VRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAA-SEIQALS---------------------- 192 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCC-ccccccc----------------------
Confidence 99999999999999999989999999887765555544433322211100 0000000
Q ss_pred CcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHH-HHHHHHHHHH
Q 007736 276 MFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLP-IWATTIIFWT 354 (591)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 354 (591)
+....+.. ..++ ...+.+.+..... .+.....+..
T Consensus 193 --------------------~~~~~~~~-------------------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 228 (365)
T TIGR00900 193 --------------------NAVLRDTR-------------------EGIK-----FVLKNPLLRTLLLLALLFNLVFAP 228 (365)
T ss_pred --------------------hhHHHHHH-------------------hHHH-----HHHcCcHHHHHHHHHHHHHHHHHH
Confidence 00000000 0000 0000011111111 1111112211
Q ss_pred HhccccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHHHH
Q 007736 355 VYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIFAM 434 (591)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~~~ 434 (591)
......+++.....+.+ ....+.......+..++..++.+++. +|.. +.+.+..+..+.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~-------~~~~~~~~~~~~~~~~ 291 (365)
T TIGR00900 229 AIVALFPYVQSKYLGRG------STHYGWVLAAFGLGALLGALLLGLLG----RYFK-------RMALMTGAIFVIGLAI 291 (365)
T ss_pred HHHHHhHHHHHHHhCCc------hHHHHHHHHHHHHHHHHHHHHHHHHH----HHhc-------hhHHHHHHHHHHHHHH
Confidence 22111122211111111 11112223333344444445555444 4322 2244555666666665
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHH
Q 007736 435 VAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGF 514 (591)
Q Consensus 435 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~ 514 (591)
..+... .. +.+.+.+..++.+++.+...+...+++.+.+|++.|++++|+.+....++.
T Consensus 292 ~~~~~~--------------------~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (365)
T TIGR00900 292 LVVGLT--------------------PP-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAW 350 (365)
T ss_pred HHHHhh--------------------ch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 555442 11 345556677888999999999989999999999999999999999999999
Q ss_pred HHHHHHHHHhhc
Q 007736 515 FVSSLLVSLVHK 526 (591)
Q Consensus 515 ~lg~~l~~~i~~ 526 (591)
.+++.+.|++.+
T Consensus 351 ~~g~~~~g~l~~ 362 (365)
T TIGR00900 351 PLGLILAGPLAD 362 (365)
T ss_pred HHHHHHHHHHHH
Confidence 999999998875
No 20
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.92 E-value=1.1e-23 Score=234.65 Aligned_cols=336 Identities=27% Similarity=0.475 Sum_probs=268.9
Q ss_pred HHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 007736 47 TTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLR 126 (591)
Q Consensus 47 ~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~ 126 (591)
+||++...+..|+++.+|++.+.+..+...+.....+.++++|+++|+++||++++.++.++..+|.++++++.. |...
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~-~~~~ 80 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAI-PSSG 80 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccC-cccc
Confidence 689999999999999999999999999999999999999999999999999999999999999999999887532 1100
Q ss_pred CCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhh
Q 007736 127 PPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVT 206 (591)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~ 206 (591)
........+++.++.++|.|+..|+..+...|++++++. .+|.++++++++++|+|+.++++
T Consensus 81 ---------------~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~---~~~~s~F~~fY~~iNiGSlis~~ 142 (654)
T TIGR00926 81 ---------------HPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL---SLRSRFFSFFYFAINAGSLISTI 142 (654)
T ss_pred ---------------cchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch---hHHHHHHHHHHHHHHHHHHHHHH
Confidence 002344567888899999999999999999999986542 23899999999999999999999
Q ss_pred hhhhhccc-------cccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccCCCCCCCCccc
Q 007736 207 VLVYIQDN-------LGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLDLPSDPSMFFN 279 (591)
Q Consensus 207 i~~~l~~~-------~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (591)
+.+++.+. .+|..+|.+++++++++++++....++++.+++.+++.....+++..+.++++......
T Consensus 143 i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~~------ 216 (654)
T TIGR00926 143 ITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSEH------ 216 (654)
T ss_pred HHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCcc------
Confidence 99998744 36999999999999999888888777776666666666666666666665533211100
Q ss_pred ccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHHHHHHHHHHHHHhccc
Q 007736 280 IDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPIWATTIIFWTVYAQM 359 (591)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (591)
....|++.+... + ..++++++|++++++.++....++|..+.|.
T Consensus 217 ------------------~~~~~ld~a~~~---------------~---~~~~V~evkrll~il~l~i~~~ifw~~~~Q~ 260 (654)
T TIGR00926 217 ------------------WPLHWLDYAKDK---------------H---DIRMIRSTKRLLRVLVLFIPLPMFWALFDQQ 260 (654)
T ss_pred ------------------cchhHHHHhccc---------------c---ccchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 012333332211 0 2335678899999999999999999999999
Q ss_pred cceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 007736 360 TTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIFAMVAAAL 439 (591)
Q Consensus 360 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~ 439 (591)
.+.+..+...++.+++++.+|++.+..++.+.++++.|+.++.+.+..+|...+ +++..++.+|+++++++++++..
T Consensus 261 ~s~~~~qa~~m~~~l~g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~~---ls~l~k~~iG~~la~la~~va~~ 337 (654)
T TIGR00926 261 GSRWTLQATRMDGDVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGTR---FTSLRKMAVGGLLAALSFFVAAL 337 (654)
T ss_pred hhHHHHHHHHhcCccCCEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCCC---CChHHHHHHHHHHHHHHHHHHHH
Confidence 998888777777777788889999999999999999999997777766665432 78899999999999999999998
Q ss_pred HHHHHHH
Q 007736 440 CEIKRLR 446 (591)
Q Consensus 440 ~~~~~~~ 446 (591)
.+.+.+.
T Consensus 338 ve~~~~~ 344 (654)
T TIGR00926 338 VQLKVNP 344 (654)
T ss_pred HHHHHhc
Confidence 8766553
No 21
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.92 E-value=1.2e-23 Score=231.53 Aligned_cols=177 Identities=14% Similarity=0.058 Sum_probs=134.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhh----hcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTG----TMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFA 106 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~ 106 (591)
++.+....+..+++.+....+....+..-.+ +.+.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.
T Consensus 15 ~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~~~ 93 (502)
T TIGR00887 15 FRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGMEL 93 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHH
Confidence 3444445555555555554444444433222 1345666788999999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhcc
Q 007736 107 TVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQM 186 (591)
Q Consensus 107 ~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 186 (591)
++..++.++++++... ....+...++++|+++|++.|+..+....+++|.+|+++ |
T Consensus 94 ~~~~v~~~~~~~~~~~------------------~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~------R 149 (502)
T TIGR00887 94 IIMIIATVASGLSPGS------------------SPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW------R 149 (502)
T ss_pred HHHHHHHHHHHHccCc------------------ccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh------H
Confidence 9999998888775210 000136789999999999999999999999999999999 9
Q ss_pred chhhhhhHHHHhhchhhhhhhhhhhcc-----------------------ccccchhHHHHHHHHHHHH
Q 007736 187 TNFFNWFFFFISIGSLAAVTVLVYIQD-----------------------NLGREWGYGICACAIVFGL 232 (591)
Q Consensus 187 ~~~~~~~~~~~~ig~~~~p~i~~~l~~-----------------------~~g~~~~f~~~~~~~~~~~ 232 (591)
+++.++.+....+|..+++.++..+.. .++||+.|.+.++..++..
T Consensus 150 g~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~ 218 (502)
T TIGR00887 150 GAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLAL 218 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHH
Confidence 999999999999999999887765421 2479999977766554433
No 22
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.92 E-value=4e-23 Score=217.83 Aligned_cols=360 Identities=14% Similarity=0.075 Sum_probs=221.4
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 007736 44 ERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIP 123 (591)
Q Consensus 44 ~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~ 123 (591)
++.....+.+.+| .+++++|++..+.+++.+.+.+++.++.++.|+++||+ |||+++.........+.. .....
T Consensus 3 ~~~~~~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~-~~~~~--- 76 (368)
T TIGR00903 3 SQAIWVTFSPVLS-LVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAG-RLLDP--- 76 (368)
T ss_pred hhHHHHHHHhhHH-HHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHH-HHHHh---
Confidence 3444444444444 45678999999999999999999999999999999998 999987665544444332 22220
Q ss_pred CCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhh
Q 007736 124 SLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLA 203 (591)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 203 (591)
.+...+++.|+++|+|.+. ..+..+.++|++|+++ |+++.++.+.+..+|..+
T Consensus 77 --------------------~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~------r~~a~~~~~~~~~lG~~l 129 (368)
T TIGR00903 77 --------------------FNYEWLLACQLLAALGQPF-LLNAFAPAASQIREER------RDLVISLLSFAMYLGIIF 129 (368)
T ss_pred --------------------ccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHH
Confidence 3788899999999999986 4556666799999988 999999999999999999
Q ss_pred hhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccCCCCCCCCcccccCC
Q 007736 204 AVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLDLPSDPSMFFNIDDI 283 (591)
Q Consensus 204 ~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (591)
++.+++++.+++|||+.|++.++..++..+..+...++.++++++...
T Consensus 130 ~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~~~-------------------------------- 177 (368)
T TIGR00903 130 ALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPFQAAEGFG-------------------------------- 177 (368)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcc--------------------------------
Confidence 999999999999999999886665544444444433332111000000
Q ss_pred ccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHHHHHHHHHHHHHhcccccee
Q 007736 284 PVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPIWATTIIFWTVYAQMTTFS 363 (591)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (591)
.. +.. .+++ +-.++++........++....++...++.++++
T Consensus 178 ------------~~---~~~-------------------~~~~----~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L 219 (368)
T TIGR00903 178 ------------FK---DAV-------------------KEFG----ALAGRKDLWIIGAILGFGVALFDNLAIWLEAAL 219 (368)
T ss_pred ------------hH---HHH-------------------HHHH----HHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000 0000 000112222333344555666666667777666
Q ss_pred eeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 007736 364 VSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIFAMVAAALCEIK 443 (591)
Q Consensus 364 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~ 443 (591)
... +++.. .+... .+..+.......+..+|..||..+ ...+....++.++.+..+...
T Consensus 220 ~~~--g~s~~-------~~~~~---~l~~~~g~~g~~~~~d~~~r~~~r-------~~~~~~~~~~~a~~~~~~~~~--- 277 (368)
T TIGR00903 220 RPA--GLEDI-------AGDAV---ALAILAGLIGVAVIPDRVARAGLR-------SIYIRAAALLIAAFFLALAFE--- 277 (368)
T ss_pred HHC--CCChH-------HHHHH---HHHHHHHHHHHHHhhHHhhhhhhH-------HHHHHHHHHHHHHHHHHHHHc---
Confidence 321 12211 11111 111122222233444444333111 111222233333333333221
Q ss_pred HHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007736 444 RLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSL 523 (591)
Q Consensus 444 ~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~ 523 (591)
.+....+....+.+++.....+..+++..|.+|++.||+++|+.+....+++.+++.+.+.
T Consensus 278 -------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~ 338 (368)
T TIGR00903 278 -------------------LNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAML 338 (368)
T ss_pred -------------------cccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHH
Confidence 1122223344455555555667778899999999999999999999999999999999987
Q ss_pred hhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHH
Q 007736 524 VHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYL 563 (591)
Q Consensus 524 i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~ 563 (591)
+.. .....|.++++.++++.+..+
T Consensus 339 ~~~----------------~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 339 FIS----------------SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred Hhc----------------CHHHHHHHHHHHHHHHHHHHH
Confidence 762 133467777888787776653
No 23
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.92 E-value=2.3e-23 Score=228.64 Aligned_cols=399 Identities=10% Similarity=-0.008 Sum_probs=245.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQA 110 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~ 110 (591)
|..+..+++..++.....-.+..-+|.. .+++|.+..+.+|+.+.|.++..++.++.|+++||+ |||+++.++.+++.
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i-~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~ 82 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTL-SMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFG 82 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHH
Confidence 4455666666777766666666666665 568999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCC-CCCChhhhhccchh
Q 007736 111 AGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQF-DDSDPQERNQMTNF 189 (591)
Q Consensus 111 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~-~~~~~~~~~~r~~~ 189 (591)
++.++++.+ ++.+.++++|+++|+|.++..+.....+.+.+ |+++ |+++
T Consensus 83 ~~~~~~~~a------------------------~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~------r~~~ 132 (495)
T PRK14995 83 LASLAAAFS------------------------PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQ------RNMA 132 (495)
T ss_pred HHHHHHHHc------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH------HHHH
Confidence 999999987 58889999999999999998888777787776 5566 9999
Q ss_pred hhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChh-hHHHH-----HHHHHH
Q 007736 190 FNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPL-TQIAS-----VFVVAW 263 (591)
Q Consensus 190 ~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~ 263 (591)
++++....++|..+||.+++++.+++|||+.|++...+.++..+......++.+++++++.+. ..... .+....
T Consensus 133 ~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~ 212 (495)
T PRK14995 133 LGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSA 212 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999887665555544444444322211111111 11000 001111
Q ss_pred hhcccCCCCCCCCcccccCCccccccccccCCCCcchhhhHH-hhhccCCCCCccccccccccccCccchhHHHHHHHHH
Q 007736 264 RKRHLDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDK-AAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRM 342 (591)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (591)
+.... .....+ ............. .-...+.. .+.|. .+....+.|.+...
T Consensus 213 ~~~~~--~~~~~~----------------~~~~~~~~~~~~l~~f~~~e~~-------~~~p~---~~~~lf~~~~~~~~ 264 (495)
T PRK14995 213 KTALK--GFLSLW----------------VTSLTLLTGALLLGLFIRTQLA-------ASRPM---IDMRLFTHRIILSG 264 (495)
T ss_pred Hhccc--cCCchH----------------HHHHHHHHHHHHHHHHHHHHhc-------CCCCC---cCHHHhCCcccHHH
Confidence 11000 000000 0000000000000 00000000 00111 00000111111111
Q ss_pred HH-HHHHHHHHHHHhccccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchh
Q 007736 343 LP-IWATTIIFWTVYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQ 421 (591)
Q Consensus 343 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~ 421 (591)
.. .+.....++......+.++ +...+.+ ....+.......+...+..++.+++.+|..+| +
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~l-q~v~g~s------~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~-----------~ 326 (495)
T PRK14995 265 VVMAMTAMITLVGFELLMAQEL-QFVHGLS------PLEAGMFMLPVMVASGFSGPIAGILVSRLGLR-----------L 326 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----------H
Confidence 11 1111111111111111111 1111111 11122333333445556666666666444332 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHH
Q 007736 422 RIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTM 501 (591)
Q Consensus 422 ~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~ 501 (591)
.+..|+++.+++.+.+.... ...+.+......++.|+|.++..+.....+.+.+|++.++.
T Consensus 327 ~~~~g~~~~~~~~~~l~~~~-------------------~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~ 387 (495)
T PRK14995 327 VATGGMALSALSFYGLAMTD-------------------FSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAA 387 (495)
T ss_pred HHHHHHHHHHHHHHHHHHhc-------------------CCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcch
Confidence 46678877777776655431 11233344556788899999988888888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc
Q 007736 502 STGLFLSTLSLGFFVSSLLVSLVHK 526 (591)
Q Consensus 502 ~~gl~~~~~~lg~~lg~~l~~~i~~ 526 (591)
+++++++.+.+|+.+|+.+.+.+.+
T Consensus 388 ~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 388 AGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999865
No 24
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.92 E-value=4.2e-23 Score=220.01 Aligned_cols=366 Identities=12% Similarity=0.023 Sum_probs=236.3
Q ss_pred HHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 007736 45 RLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPS 124 (591)
Q Consensus 45 ~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~ 124 (591)
+..++.+.+.+| .+++++|+|..+.+++.+.+.+++.+++++.|+++||+ |||+++..+..+++++.++++++
T Consensus 22 ~~~~~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a----- 94 (393)
T PRK09705 22 RPLLTSVGPLLP-QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELY----- 94 (393)
T ss_pred chhhhccchhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHC-----
Confidence 333455555555 45678999999999999999999999999999999998 99999999999999999999987
Q ss_pred CCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhh
Q 007736 125 LRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAA 204 (591)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~ 204 (591)
+++..++++|+++|+|.+...+....++.|++| ++ |+++.+++..+.++|..++
T Consensus 95 -------------------~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~~~g~~~g 148 (393)
T PRK09705 95 -------------------PQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR------TPLVMGLWSAALMGGGGLG 148 (393)
T ss_pred -------------------cchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc------chhHHHHHHHHHHHHHHHH
Confidence 477888999999999999999998999999987 66 8999999999999999999
Q ss_pred hhhhhhhcccc-ccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccCCCCCCCCcccccCC
Q 007736 205 VTVLVYIQDNL-GREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLDLPSDPSMFFNIDDI 283 (591)
Q Consensus 205 p~i~~~l~~~~-g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (591)
+.+++++.++. +|+..+.+.++..++..+..+...++.+ +++++
T Consensus 149 ~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------------------------- 193 (393)
T PRK09705 149 AAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREV---ASSHK-------------------------------- 193 (393)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCC---ccccC--------------------------------
Confidence 99999888775 8998876554443333332222211110 00000
Q ss_pred ccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHHHHHHHHHHHHHhcccccee
Q 007736 284 PVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPIWATTIIFWTVYAQMTTFS 363 (591)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (591)
. + .. ....+ .+.+.........+....++....+.+.++
T Consensus 194 ----~----~---~~----------------------~~~~l--------~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l 232 (393)
T PRK09705 194 ----T----T---TT----------------------PVRVV--------FTPRAWTLGVYFGLINGGYASLIAWLPAFY 232 (393)
T ss_pred ----C----C---cC----------------------Ccccc--------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00 00000 011111111222222333334444444443
Q ss_pred eeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 007736 364 VSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIFAMVAAALCEIK 443 (591)
Q Consensus 364 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~ 443 (591)
.. .+.+.. ..+.......+..+++.++.+++. +|.. +.+.+.++..+.+++.+.+....
T Consensus 233 ~~--~g~s~~------~ag~~~~~~~i~~i~g~~~~g~l~----~r~~-------~~~~~~~~~~l~~~~~~~~~~~~-- 291 (393)
T PRK09705 233 IE--IGASAQ------YSGSLLALMTLGQAAGALLMPAMA----RHQD-------RRKLLMLALVLQLVGFCGFIWLP-- 291 (393)
T ss_pred HH--cCCChh------hhhHHHHHHHHHHHHHHHHHHHHH----hhcc-------chHHHHHHHHHHHHHHHHHHHcc--
Confidence 22 121111 122233344444555555555544 4422 22446667767666665554321
Q ss_pred HHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccC-CcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 007736 444 RLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLREC-PKGMKTMSTGLFLSTLSLGFFVSSLLVS 522 (591)
Q Consensus 444 ~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~-p~~~rg~~~gl~~~~~~lg~~lg~~l~~ 522 (591)
. +...+ ..++.+++.+...|.......+.. |++.+++.+|+.+....++..+++.+.+
T Consensus 292 ------------------~-~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G 350 (393)
T PRK09705 292 ------------------L-QLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSG 350 (393)
T ss_pred ------------------c-hHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11111 123456666666666655556666 4678999999999999999999999999
Q ss_pred HhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Q 007736 523 LVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWYVYKDK 574 (591)
Q Consensus 523 ~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~~~ 574 (591)
++.+..| +++..|.+.++.++++.+..+.+.++++.+..
T Consensus 351 ~l~~~~g-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK09705 351 VLRSISG-------------NYLMDWAFHALCVVGLMIITLRFAPARFPQLW 389 (393)
T ss_pred HHHHHhC-------------CchHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 9986542 23456777777777777777777776665543
No 25
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.92 E-value=8.5e-23 Score=218.45 Aligned_cols=160 Identities=11% Similarity=0.113 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 007736 46 LTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSL 125 (591)
Q Consensus 46 ~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~ 125 (591)
.+...+.+.++. +.+++|.+..+.++..+.+.+++.++.++.|+++||+ ||||++.++..+.+++.+++..+
T Consensus 27 ~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~------ 98 (406)
T PRK15402 27 IANDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAFFILTCLAILLA------ 98 (406)
T ss_pred hhhhhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHH------
Confidence 344445555554 4578999999999999999999999999999999998 99999999999988888887775
Q ss_pred CCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhh
Q 007736 126 RPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAV 205 (591)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p 205 (591)
.+.+.+++.|++.|++.+...+...+++.|.+|+++ |.+..++......++..++|
T Consensus 99 ------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~~~~g~ 154 (406)
T PRK15402 99 ------------------QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------AIKITALMANVALLAPLLGP 154 (406)
T ss_pred ------------------ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------HHHHHHHHHHHHHHHHHHHH
Confidence 477788899999999999888888899999999988 88989998878888999999
Q ss_pred hhhhhhccccccchhHHHHHHHHHHHHHHHHh
Q 007736 206 TVLVYIQDNLGREWGYGICACAIVFGLVVFLS 237 (591)
Q Consensus 206 ~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 237 (591)
.+++++.+..+|++.|++.++..++..+..+.
T Consensus 155 ~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~ 186 (406)
T PRK15402 155 LVGAALIHVLPWRGMFVLFAALAALSFFGLWR 186 (406)
T ss_pred HHHHHHHHccCccHHHHHHHHHHHHHHHHHHH
Confidence 99999998899999998877665555444333
No 26
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.92 E-value=1.5e-23 Score=228.51 Aligned_cols=150 Identities=11% Similarity=-0.035 Sum_probs=126.2
Q ss_pred HHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCC
Q 007736 56 VTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHG 135 (591)
Q Consensus 56 ~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~ 135 (591)
.+.+.+++|++..+.+++.+.+.+++.++.++.|+++||+ |||+++.+++++.+++.++.+....
T Consensus 52 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-------------- 116 (467)
T PRK09556 52 QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLG-------------- 116 (467)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHh--------------
Confidence 3456789999999999999999999999999999999998 9999999988888887776665311
Q ss_pred CcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhcccc
Q 007736 136 QSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDNL 215 (591)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~ 215 (591)
....+...+++.|+++|++.+...+...++++|++|+++ |+++++++..+.++|.++++.+..++.+..
T Consensus 117 -----~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~ 185 (467)
T PRK09556 117 -----SGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------RGRFLGFWNISHNLGGAGAGGVALWGANYF 185 (467)
T ss_pred -----cccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------eeeeEEeeecccchhhhHHHHHHHHHHHhh
Confidence 011478899999999999999999999999999999999 999999999999999999998887766543
Q ss_pred ---ccchhHHHHHHHHHHH
Q 007736 216 ---GREWGYGICACAIVFG 231 (591)
Q Consensus 216 ---g~~~~f~~~~~~~~~~ 231 (591)
+|+..|.+.++..++.
T Consensus 186 ~~~~~~~~f~~~g~~~~~~ 204 (467)
T PRK09556 186 FDGHVIGMFIFPSIIALII 204 (467)
T ss_pred ccCcchhHHHHHHHHHHHH
Confidence 5888887766544433
No 27
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.92 E-value=2.4e-23 Score=222.28 Aligned_cols=378 Identities=13% Similarity=0.056 Sum_probs=242.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHH-----HHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNAS-----AANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFA 106 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~ 106 (591)
+++..+.+..++...++....+.+|.|++ ++|++..+ .+++.+.+.+...++.++.|+++||+ |||+++..+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~ 91 (408)
T PRK09874 14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSA 91 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHH
Confidence 45666777888888888888899999986 58887654 47888899999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhcc
Q 007736 107 TVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQM 186 (591)
Q Consensus 107 ~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 186 (591)
++.+++.+++... .+.+.+++.|++.|++.+ ..+...+++.|.+|+++ |
T Consensus 92 ~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~------~ 140 (408)
T PRK09874 92 LGMGIVMVLMGLA------------------------QNIWQFLILRALLGLLGG-FVPNANALIATQVPRNK------S 140 (408)
T ss_pred HHHHHHHHHHHHH------------------------hhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhh------h
Confidence 8888888777765 478888999999998765 45777788899999888 9
Q ss_pred chhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhc
Q 007736 187 TNFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKR 266 (591)
Q Consensus 187 ~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (591)
+++.++.+...++|..++|.+++.+.+.++|++.|++.++..++..+..+...++.+. +.+++.+.
T Consensus 141 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~------------ 206 (408)
T PRK09874 141 GWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQ--PVSKKEML------------ 206 (408)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcc--cccchhhh------------
Confidence 9999999999999999999999999988999999988876655554443333332110 00000000
Q ss_pred ccCCCCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHHH-
Q 007736 267 HLDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPI- 345 (591)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 345 (591)
...+..... + +.+........
T Consensus 207 ----------------------------------~~~~~~~~~------------~------------~~~~~~~~~~~~ 228 (408)
T PRK09874 207 ----------------------------------HMREVVTSL------------K------------NPKLVLSLFVTT 228 (408)
T ss_pred ----------------------------------HHHHHHHhC------------c------------CCchHHHHHHHH
Confidence 000000000 0 00001101110
Q ss_pred HHHHHHHHHHhccccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHH
Q 007736 346 WATTIIFWTVYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGV 425 (591)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~ 425 (591)
..............+.+..... ..... .....+.+.....+..++..++.+++.+|..+| +.+..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~-----------~~~~~ 293 (408)
T PRK09874 229 LIIQVATGSIAPILTLYVRELA-GNVSN---IAFISGMIASVPGVAALLSAPRLGKLGDRIGPE-----------KILIT 293 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-ccchH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-----------hhHHH
Confidence 0111111011111111111000 00000 000011122222333444555555555443332 44556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHH
Q 007736 426 GLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGL 505 (591)
Q Consensus 426 g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl 505 (591)
+..+..++++.+... .+.+.+.+..++.+++.+...|...+++.+..|++.+|+.+|+
T Consensus 294 ~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 351 (408)
T PRK09874 294 ALIFSVLLLIPMSFV----------------------QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSY 351 (408)
T ss_pred HHHHHHHHHHHHHHh----------------------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehH
Confidence 666665555544432 1334445566778888888888888888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 007736 506 FLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAF 565 (591)
Q Consensus 506 ~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~ 565 (591)
++....+|..+|+.+.|.+.+..+ +...|++.+++++++.+..++.
T Consensus 352 ~~~~~~~g~~~gp~~~G~l~~~~g--------------~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 352 NQSFRDIGNVTGPLMGAAISANYG--------------FRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHHHHHHHHHhhHHHHHHHHhhcc--------------hhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998875321 3456777777777776655544
No 28
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.91 E-value=1.4e-22 Score=216.09 Aligned_cols=173 Identities=13% Similarity=0.153 Sum_probs=151.0
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHH
Q 007736 28 TGGWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFAT 107 (591)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~ 107 (591)
++.|+.+..+.+..++.....|.....+|.+ .+++|+++.+.++..+.+.++..++.++.|+++||+ |||+++..+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~~~~ 93 (394)
T PRK10213 16 RPNWSAVFSVAFCVACLIIVEFLPVSLLTPM-AQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVILFAV 93 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHHHHH
Confidence 4467766667676666666666666666664 568999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccc
Q 007736 108 VQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMT 187 (591)
Q Consensus 108 ~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 187 (591)
+.+++.+++.++ .+++.+++.|+++|++.+...+...+++.|++|+++ |+
T Consensus 94 ~~~~~~~~~~~~------------------------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~------~~ 143 (394)
T PRK10213 94 LLTLSCLLVSFA------------------------NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT------VP 143 (394)
T ss_pred HHHHHHHHHHHH------------------------ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH------HH
Confidence 999988888776 588999999999999999999999999999999998 99
Q ss_pred hhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHH
Q 007736 188 NFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGL 232 (591)
Q Consensus 188 ~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~ 232 (591)
++.++...+.++|..++|.+++++.+.+||++.|++.++..++..
T Consensus 144 ~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 144 KALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCI 188 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988775544433
No 29
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.91 E-value=1.2e-22 Score=217.96 Aligned_cols=180 Identities=12% Similarity=0.029 Sum_probs=152.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHH
Q 007736 30 GWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQ 109 (591)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~ 109 (591)
.|+.++...+..+++.+....+....+ .+++++|++..+.+++.+.+.+++.+++++.|+++||+ |||+++..++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~ 83 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVLW 83 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHHH
Confidence 466667777777777776666655554 78899999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchh
Q 007736 110 AAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNF 189 (591)
Q Consensus 110 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 189 (591)
.++.++++++ .+...+++.|+++|++.+...+....++.|++|+++ |+++
T Consensus 84 ~~~~~~~~~~------------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------rg~~ 133 (412)
T TIGR02332 84 GIASTATMFA------------------------TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF------RARA 133 (412)
T ss_pred HHHHHHHHHh------------------------cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH------HHHH
Confidence 9999999886 478889999999999999999988899999999998 9999
Q ss_pred hhhhHHHHhhchhhhhhhhhhhcc------ccccchhHHHHHHHHHHHHHHHHhcCCc
Q 007736 190 FNWFFFFISIGSLAAVTVLVYIQD------NLGREWGYGICACAIVFGLVVFLSGTRR 241 (591)
Q Consensus 190 ~~~~~~~~~ig~~~~p~i~~~l~~------~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 241 (591)
.++++.+..+|..+++.+++++.+ ..|||+.|++.++..++..++.++..++
T Consensus 134 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~ 191 (412)
T TIGR02332 134 NALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDD 191 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCC
Confidence 999999999999999999998763 4699999998776655444444444443
No 30
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.91 E-value=8.8e-23 Score=221.15 Aligned_cols=142 Identities=19% Similarity=0.268 Sum_probs=123.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchh
Q 007736 65 LGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGM 144 (591)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (591)
.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.+++...... .
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~~---------------------~ 125 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAFA---------------------L 125 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhccc---------------------c
Confidence 3389999999999999999999999999998 99999999999999998888765211 3
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhh---hhhccccccchhH
Q 007736 145 QLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVL---VYIQDNLGREWGY 221 (591)
Q Consensus 145 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~---~~l~~~~g~~~~f 221 (591)
+.+.++++|+++|+|.+...+...++++|++|+++ |+++.++++.+.++|..+++.++ +.+.+..+||+.|
T Consensus 126 ~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f 199 (481)
T TIGR00879 126 SVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPL 199 (481)
T ss_pred chHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHH
Confidence 45688999999999999999999999999999999 99999999999999999999998 7777778999999
Q ss_pred HHHHHHHHHHHHH
Q 007736 222 GICACAIVFGLVV 234 (591)
Q Consensus 222 ~~~~~~~~~~~~~ 234 (591)
++.++..++..+.
T Consensus 200 ~~~~~~~~~~~~~ 212 (481)
T TIGR00879 200 GLQLIPAGLLFLG 212 (481)
T ss_pred HHHHHHHHHHHHH
Confidence 9866554444433
No 31
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.91 E-value=2.9e-22 Score=216.30 Aligned_cols=175 Identities=16% Similarity=0.124 Sum_probs=129.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC---CChHHHHHHHH---HHHHHHHHHHhhhHHHhhhhchhHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMH---LGNASAANTVT---NFLGTSFMLCLLGGFIADTFLGRYLTIAIF 105 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~---~~~~~~~~~~~---~~~~~~~i~~~~~G~laD~~~Grk~~~~~~ 105 (591)
+.+....+..+++.+.... ..++.+++.++++ .+..+.+.+.+ ...++..++.+++|+++||+ ||||++.++
T Consensus 22 ~~~~~~~~~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~ 99 (432)
T PRK10406 22 WAIVGASSGNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLIS 99 (432)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHH
Confidence 3444444556677777666 5556667777774 45554444434 34455559999999999998 999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhc
Q 007736 106 ATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQ 185 (591)
Q Consensus 106 ~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 185 (591)
.++++++.++++++.+.... ...+...+.+.|+++|+|.|+..+...++++|++|+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~------ 157 (432)
T PRK10406 100 VCMMCFGSLVIACLPGYETI----------------GTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR------ 157 (432)
T ss_pred HHHHHHHHHHHhhcCCchhH----------------HHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc------
Confidence 99999999999886211000 00234568899999999999999999999999999998
Q ss_pred cchhhhhhHHHHhhchhhhhhhhhhhc--------cccccchhHHHHHHHHHH
Q 007736 186 MTNFFNWFFFFISIGSLAAVTVLVYIQ--------DNLGREWGYGICACAIVF 230 (591)
Q Consensus 186 r~~~~~~~~~~~~ig~~~~p~i~~~l~--------~~~g~~~~f~~~~~~~~~ 230 (591)
|+++.++.+.+.+.|..+++.+...+. +.+|||++|++.++..++
T Consensus 158 rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll 210 (432)
T PRK10406 158 KGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVV 210 (432)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHH
Confidence 999999988888888888876655443 257999999987664443
No 32
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.91 E-value=8.6e-23 Score=215.21 Aligned_cols=155 Identities=17% Similarity=0.181 Sum_probs=137.3
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 007736 53 VNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNL 132 (591)
Q Consensus 53 ~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 132 (591)
....+++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.+++..+++++
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~------------- 79 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFA------------- 79 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHH-------------
Confidence 3344557889999999999999999999999999999999998 99999999999999999888876
Q ss_pred CCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhc
Q 007736 133 NHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQ 212 (591)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~ 212 (591)
.+.+.++++|++.|++.+...+...+++.|.+|+++ |++.+++.+...++|..++|.+++.+.
T Consensus 80 -----------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~l~ 142 (399)
T TIGR00893 80 -----------GAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE------RATAVSIFNSAQGLGGIIGGPLVGWIL 142 (399)
T ss_pred -----------cCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH------HHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 478889999999999999999999999999999988 999999999999999999999999999
Q ss_pred cccccchhHHHHHHHHHHHHHHHHhc
Q 007736 213 DNLGREWGYGICACAIVFGLVVFLSG 238 (591)
Q Consensus 213 ~~~g~~~~f~~~~~~~~~~~~~~~~~ 238 (591)
+..+|++.|++.++..++..+..+..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (399)
T TIGR00893 143 IHFSWQWAFIIEGVLGIIWGVLWLKF 168 (399)
T ss_pred HhCCchHHHHHHHHHHHHHHHHhhhe
Confidence 98999999988776655544444333
No 33
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.91 E-value=1e-22 Score=221.14 Aligned_cols=156 Identities=9% Similarity=0.018 Sum_probs=124.6
Q ss_pred HHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 007736 54 NLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLN 133 (591)
Q Consensus 54 ~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 133 (591)
...+|+.++ |++..+.+++.+.+.++..+++++.|+++||+ |||+++.++.++.+++.+++++....
T Consensus 50 ~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~~----------- 116 (452)
T PRK11273 50 LAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPWA----------- 116 (452)
T ss_pred HhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhcc-----------
Confidence 344567777 99999999999999999999999999999998 99999999999999988888765210
Q ss_pred CCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhh-hhhhhhhhc
Q 007736 134 HGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLA-AVTVLVYIQ 212 (591)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~-~p~i~~~l~ 212 (591)
..+...+++.|++.|++.+...+...+.+.|++|+++ |++++++++.+.++|+.+ +|+++..+.
T Consensus 117 ---------~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 181 (452)
T PRK11273 117 ---------TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWNCAHNVGGGLPPLLFLLGMA 181 (452)
T ss_pred ---------cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH------HHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 0256778888999999999888888888999999998 999999999999988754 555433333
Q ss_pred cccccchhHHHHHHHHHHHHHHHHh
Q 007736 213 DNLGREWGYGICACAIVFGLVVFLS 237 (591)
Q Consensus 213 ~~~g~~~~f~~~~~~~~~~~~~~~~ 237 (591)
...||++.|++.++..++..+..++
T Consensus 182 ~~~gw~~~f~i~~~~~~~~~~l~~~ 206 (452)
T PRK11273 182 WFNDWHAALYMPAFAAILVALFAFA 206 (452)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHH
Confidence 3458999999877655544333333
No 34
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.91 E-value=7e-23 Score=220.28 Aligned_cols=166 Identities=13% Similarity=0.134 Sum_probs=145.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHH
Q 007736 30 GWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQ 109 (591)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~ 109 (591)
+++.+....+..+.+.+..+.....+ .++++++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~~ 93 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLIFYIM-YLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 45566666677777777766654444 456788999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchh
Q 007736 110 AAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNF 189 (591)
Q Consensus 110 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 189 (591)
+++.++++++ .+...++++|+++|++.+...+....++.|.+|+++ |+++
T Consensus 94 ~~~~~~~~~~------------------------~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~------r~~~ 143 (426)
T PRK12307 94 SVGTGLSGLA------------------------SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL------KSKA 143 (426)
T ss_pred HHHHHHHHHH------------------------hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH------hhHh
Confidence 9999888886 578899999999999999999999999999999998 9999
Q ss_pred hhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHH
Q 007736 190 FNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACA 227 (591)
Q Consensus 190 ~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~ 227 (591)
.++...+..+|..+++.+.+.+.+.+||++.|++..+.
T Consensus 144 ~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 144 SAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred hhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHH
Confidence 99999999999999999999998989999999876543
No 35
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.91 E-value=2.4e-22 Score=220.40 Aligned_cols=175 Identities=15% Similarity=0.104 Sum_probs=129.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHH-HHH-----HHHHHHHHHHHHHhhhHHHhhhhchhHHHHHH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNAS-AAN-----TVTNFLGTSFMLCLLGGFIADTFLGRYLTIAI 104 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~-~~~-----~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~ 104 (591)
++.+....++.+++.+.+..+. +..+++.+.++.+..+ ..+ +.+...++..++.++.|+++||+ |||+++.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYG-FVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 4455566677777777666544 4455777777543321 122 24667788999999999999998 99999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhh
Q 007736 105 FATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERN 184 (591)
Q Consensus 105 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 184 (591)
++++++++.++++++.+...++ -.....+.+.|+++|+|.|+..+...++++|++|+++
T Consensus 93 ~~~l~~i~~~~~a~~~~~~~~g----------------~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~----- 151 (490)
T PRK10642 93 TIVIMSISTFCIGLIPSYATIG----------------IWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK----- 151 (490)
T ss_pred HHHHHHHHHHHHHhcccHHHHH----------------HHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC-----
Confidence 9999999999999872110000 0011247889999999999999999999999999999
Q ss_pred ccchhhhhhHHHHhhchhhhhhhhhhhc--------cccccchhHHHHHHHHH
Q 007736 185 QMTNFFNWFFFFISIGSLAAVTVLVYIQ--------DNLGREWGYGICACAIV 229 (591)
Q Consensus 185 ~r~~~~~~~~~~~~ig~~~~p~i~~~l~--------~~~g~~~~f~~~~~~~~ 229 (591)
|+++.++...+..+|..+++.+...+. ..+|||+.|++.++..+
T Consensus 152 -Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l 203 (490)
T PRK10642 152 -RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGI 203 (490)
T ss_pred -CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHH
Confidence 999999988888888888776554432 25799999998765433
No 36
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.91 E-value=3.9e-22 Score=217.81 Aligned_cols=174 Identities=10% Similarity=0.035 Sum_probs=133.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHH
Q 007736 30 GWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQ 109 (591)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~ 109 (591)
+++.++......++.....+...+.++ ++.+++|++..+.+++.+.+.+++.++.++.|+++||+ |||+++..+.++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~ 111 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPLLP-IIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLT 111 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 344555555555555555555554444 55778999999999999999999999999999999998 9999999999888
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchh
Q 007736 110 AAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNF 189 (591)
Q Consensus 110 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 189 (591)
+++.++++++ .+...+++.|+++|++.+... ....+++|++|+++ |+++
T Consensus 112 ~~~~~~~~~~------------------------~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~------rg~a 160 (476)
T PLN00028 112 APAVFCMSLV------------------------SSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKI------VGTA 160 (476)
T ss_pred HHHHHHHHHh------------------------cCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhh------eeHH
Confidence 8888888776 467778889999999888654 45567899999998 9999
Q ss_pred hhhhHHHHhhchhhhhhhhhhhcc---------ccccchhHHHHHHHHHHHHHHHH
Q 007736 190 FNWFFFFISIGSLAAVTVLVYIQD---------NLGREWGYGICACAIVFGLVVFL 236 (591)
Q Consensus 190 ~~~~~~~~~ig~~~~p~i~~~l~~---------~~g~~~~f~~~~~~~~~~~~~~~ 236 (591)
.++.+...++|+.+++.+.+.+.. ..|||+.|++.+++.++..+..+
T Consensus 161 ~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~ 216 (476)
T PLN00028 161 NGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVL 216 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHH
Confidence 999887778888877666654421 25899999988766554444333
No 37
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.91 E-value=6.6e-23 Score=209.30 Aligned_cols=181 Identities=12% Similarity=-0.027 Sum_probs=156.8
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHH---HHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHH
Q 007736 28 TGGWTSAAMILGGEACERLTTLGIAVNL---VTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAI 104 (591)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~ 104 (591)
+..+|--+.+++..++-..++|..--++ .+++.++.++|.+|.|.+.+.+.+++.++..+.|.++||. +.|+.+.+
T Consensus 21 ~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~ 99 (448)
T COG2271 21 KTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAF 99 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehH
Confidence 3344444667777777777777655443 4678888999999999999999999999999999999997 99999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhh
Q 007736 105 FATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERN 184 (591)
Q Consensus 105 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 184 (591)
++++.++..++++++ .+...+.+...+.|..+|.-.|++...++.++++++
T Consensus 100 gLilsai~nil~Gfs------------------------~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e----- 150 (448)
T COG2271 100 GLILSAIVNILFGFS------------------------PSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE----- 150 (448)
T ss_pred HHHHHHHHHHHHhhh------------------------hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc-----
Confidence 999999999999997 588888889999999999999999999999999999
Q ss_pred ccchhhhhhHHHHhhchhhhhhhh--hhhccccccchhHHHHHHHHHHHHHHHHhcC
Q 007736 185 QMTNFFNWFFFFISIGSLAAVTVL--VYIQDNLGREWGYGICACAIVFGLVVFLSGT 239 (591)
Q Consensus 185 ~r~~~~~~~~~~~~ig~~~~p~i~--~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 239 (591)
||+..++.|.+-|+|+++.|++. +++..+++|+..|++++++.++..++.+...
T Consensus 151 -RG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~ 206 (448)
T COG2271 151 -RGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLL 206 (448)
T ss_pred -cCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999 9999999999999999876655544444433
No 38
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.91 E-value=3.6e-22 Score=210.51 Aligned_cols=172 Identities=11% Similarity=-0.011 Sum_probs=138.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHH-HHHHHHHHHHHH
Q 007736 38 LGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAI-FATVQAAGVTIL 116 (591)
Q Consensus 38 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~-~~~~~~i~~~l~ 116 (591)
++..++...+.....+.++.|+++++|.+..+.+++.+.+.+...+..++.|+++||+ ||||.+++ +..+..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHH
Confidence 4567788888888999999999999999999999999999999999999999999998 99887665 445555566666
Q ss_pred HHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchh--hhhhH
Q 007736 117 TISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNF--FNWFF 194 (591)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~~~ 194 (591)
+.+ ++.+.+++.|++++.+.+...|...++..|..|++. |.+. .++..
T Consensus 82 ~~~------------------------~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~ 131 (375)
T TIGR00899 82 AWN------------------------RNYFLLLVLGVLLSSFASTANPQLFALAREHADRTG------REAVMFSSVMR 131 (375)
T ss_pred Hhc------------------------chHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc------hhhHHHHHHHH
Confidence 664 467778888888887777777877888888877666 5543 57777
Q ss_pred HHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCC
Q 007736 195 FFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTR 240 (591)
Q Consensus 195 ~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 240 (591)
...++|..++|.+++++.+.+||++.|++.++..++..+..++..+
T Consensus 132 ~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 177 (375)
T TIGR00899 132 AQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLP 177 (375)
T ss_pred HHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCC
Confidence 7889999999999999999899999999887765555444444333
No 39
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.91 E-value=4.2e-23 Score=214.99 Aligned_cols=350 Identities=17% Similarity=0.226 Sum_probs=227.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHH
Q 007736 38 LGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILT 117 (591)
Q Consensus 38 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~ 117 (591)
++..++.........+.++.++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.+++.+++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhh
Confidence 4566677777777777788788899999999999999999999999999999999998 999999999999999966666
Q ss_pred HHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHH
Q 007736 118 ISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFI 197 (591)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 197 (591)
++ .+.+.++++|++.|++.+...+...+++.|++|+++ |++.+++.+.+.
T Consensus 81 ~~------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~ 130 (352)
T PF07690_consen 81 FA------------------------SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE------RGRAFGILSAGF 130 (352)
T ss_dssp HH------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC------HHHHHHHHHHHH
T ss_pred hh------------------------hhHHHHhhhccccccccccccccccccccccchhhh------hhhccccccchh
Confidence 54 255588999999999999999999999999999998 999999999999
Q ss_pred hhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccCCCCCCCCc
Q 007736 198 SIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLDLPSDPSMF 277 (591)
Q Consensus 198 ~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (591)
++|..++|.+++++.+..+|++.|++.++..++..++.....++.+.+++++++.+
T Consensus 131 ~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~------------------------ 186 (352)
T PF07690_consen 131 SLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKE------------------------ 186 (352)
T ss_dssp HHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTT------------------------
T ss_pred hhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcccccccccccc------------------------
Confidence 99999999999999999999999999888777665543333332211111111000
Q ss_pred ccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHH-HHHHHHHHHHHHHHHh
Q 007736 278 FNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVI-RMLPIWATTIIFWTVY 356 (591)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 356 (591)
..+ . .+.++.. .-+...+.+.++ .....+.....+....
T Consensus 187 ------------------~~~------~---------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (352)
T PF07690_consen 187 ------------------SES------K---------------KPKPLKP-GFKSLFKNPVLWILLIAFFLFFFVFSGFS 226 (352)
T ss_dssp ------------------TT-----------------------HHHCCCH--CTHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred ------------------ccc------c---------------ccccccc-ccccccccchhhhhhhhhhHHHHHHHHhh
Confidence 000 0 0011100 001111122111 1111112222222222
Q ss_pred ccccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHHHHHH
Q 007736 357 AQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIFAMVA 436 (591)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~ 436 (591)
.+.+.+ .....+.+ . ....+.......+...+..++.+++.+|..+| +.+.+......++.+.
T Consensus 227 ~~~~~~-l~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~~~ 289 (352)
T PF07690_consen 227 FFLPLY-LQEVLGFS-G----PSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRR-----------RRLLIAILLLILGALG 289 (352)
T ss_dssp HHHHHH-CCHHHHCC-T----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-----------HHHHHHHHHHHHHHHH
T ss_pred cccchh-hhhccCCC-H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----------HHHHHHHHHHHHHHHH
Confidence 222222 11111111 0 00112222333333444455556555433222 3344444444444444
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHH
Q 007736 437 AALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFV 516 (591)
Q Consensus 437 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~l 516 (591)
+.... ...+..+.+...++.|++.+...+...+++.+.+|++.+|++.|+.+...+++..+
T Consensus 290 ~~~~~-------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~i 350 (352)
T PF07690_consen 290 LLLLP-------------------FSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGII 350 (352)
T ss_dssp HCCSH-------------------HHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-------------------HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 43321 11234455567788899999999999999999999999999999999999999998
Q ss_pred HH
Q 007736 517 SS 518 (591)
Q Consensus 517 g~ 518 (591)
||
T Consensus 351 gP 352 (352)
T PF07690_consen 351 GP 352 (352)
T ss_dssp HH
T ss_pred CC
Confidence 86
No 40
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.91 E-value=6.8e-23 Score=215.15 Aligned_cols=339 Identities=12% Similarity=0.021 Sum_probs=216.2
Q ss_pred HHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 007736 48 TLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRP 127 (591)
Q Consensus 48 ~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~ 127 (591)
.|.. ..+.+++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.+++.++++++
T Consensus 19 ~~~~-~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~-------- 88 (377)
T TIGR00890 19 VYTW-TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIA-------- 88 (377)
T ss_pred Hhhh-hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHH--------
Confidence 4443 4456677789999999999999999999999999999999998 99999999999999999988887
Q ss_pred CCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhh
Q 007736 128 PKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTV 207 (591)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i 207 (591)
.+.+.++++|++.|++.+...+.....+.+++| ++ |+++.++...+.++|..+++.+
T Consensus 89 ----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~~~~~~ 145 (377)
T TIGR00890 89 ----------------DSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DK------RGLASGIIIGGYGLGSFILSPL 145 (377)
T ss_pred ----------------HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cc------cHHHHHHHHHhcchhHhHHHHH
Confidence 588899999999999999888788888888886 45 8999999999999998887777
Q ss_pred hhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccCCCCCCCCcccccCCcccc
Q 007736 208 LVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLDLPSDPSMFFNIDDIPVEG 287 (591)
Q Consensus 208 ~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (591)
.+.+.+..||++.|++.++..++..+..+...++.++++.+++.
T Consensus 146 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------ 189 (377)
T TIGR00890 146 ITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNI------------------------------------ 189 (377)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhccccCc------------------------------------
Confidence 77777778999999988766555444433332221110000000
Q ss_pred ccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHHHHHHHHHHHHHhccccceeeeee
Q 007736 288 KKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPIWATTIIFWTVYAQMTTFSVSQA 367 (591)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (591)
+.+ .+... .... .++.+........+............... +.. .
T Consensus 190 -----~~~-~~~~~---~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~ 234 (377)
T TIGR00890 190 -----EVS-VKDYT---VWEM------------------------LRTPQFWVLYLSFFLNAVSGLLLIGLYKP-YGQ-S 234 (377)
T ss_pred -----ccc-hhhhh---HHHH------------------------HcCccHHHHHHHHHHHhHHHHHHHHHHHH-HHH-H
Confidence 000 00000 0000 00001111111111111111111111111 111 0
Q ss_pred ccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007736 368 TTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRA 447 (591)
Q Consensus 368 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~ 447 (591)
.+.+ ............+..++..++.+++.+|..|| +.+.++..+.+++.+.+....
T Consensus 235 ~~~~------~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----------~~~~~~~~~~~~~~~~~~~~~------ 291 (377)
T TIGR00890 235 LGLS------DGFLVLAVSISSIFNGGGRPFLGALSDKIGRQ-----------KTMSIVFGISAVGMAAMLFIP------ 291 (377)
T ss_pred cCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----------hhhhHHHHHHHHHHHHHHHcc------
Confidence 1111 00112333444455556666777777655444 335666677777666555431
Q ss_pred hhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 007736 448 ARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVHKV 527 (591)
Q Consensus 448 ~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~ 527 (591)
..+...++...++.+++.+...+....++.|..|++.|++..|+.+....+|..+++.+.+.+.+.
T Consensus 292 --------------~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 357 (377)
T TIGR00890 292 --------------MLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTE 357 (377)
T ss_pred --------------cchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 112222223345556665555566667788999999999999999999999999999999988754
No 41
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.91 E-value=2.7e-22 Score=213.29 Aligned_cols=172 Identities=17% Similarity=0.252 Sum_probs=151.1
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHH
Q 007736 28 TGGWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFAT 107 (591)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~ 107 (591)
+.+|+.+....+..+++.+..+.+....+. +++++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~~ 85 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAE-VAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTSIV 85 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHH
Confidence 456777788888888888888877766664 5678999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccc
Q 007736 108 VQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMT 187 (591)
Q Consensus 108 ~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 187 (591)
+.+++.++++++ .++..+++.|++.|++.+...+...+++.|.+|+++ |+
T Consensus 86 ~~~~~~~~~~~~------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~ 135 (405)
T TIGR00891 86 LFSAGTLACGFA------------------------PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL------RN 135 (405)
T ss_pred HHHHHHHHHHHh------------------------ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh------hh
Confidence 999988888776 478888999999999999999999999999999998 99
Q ss_pred hhhhhhHHHHhhchhhhhhhhhhhccccc--cchhHHHHHHHHHHH
Q 007736 188 NFFNWFFFFISIGSLAAVTVLVYIQDNLG--REWGYGICACAIVFG 231 (591)
Q Consensus 188 ~~~~~~~~~~~ig~~~~p~i~~~l~~~~g--~~~~f~~~~~~~~~~ 231 (591)
++.++.+.+.++|..+++.+++.+.+..+ |++.|++.++..++.
T Consensus 136 ~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~ 181 (405)
T TIGR00891 136 KASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA 181 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH
Confidence 99999999999999999999998887766 999998766544443
No 42
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.90 E-value=7.8e-23 Score=222.10 Aligned_cols=150 Identities=12% Similarity=0.055 Sum_probs=126.6
Q ss_pred HHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCC
Q 007736 57 TYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQ 136 (591)
Q Consensus 57 ~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 136 (591)
..+.+++|.+..+.+++.+.+.+...++.++.|+++||+ |||++++.+.++..++.++++++
T Consensus 43 ~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~----------------- 104 (455)
T TIGR00892 43 KELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFS----------------- 104 (455)
T ss_pred HHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHh-----------------
Confidence 345678999999999999999999999999999999998 99999999999999988888776
Q ss_pred cccccchhHHHHHHH-HHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhcccc
Q 007736 137 SCIQASGMQLVVLYI-ALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDNL 215 (591)
Q Consensus 137 ~~~~~~~~~~~~~~~-~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~ 215 (591)
.+.+.+++ .|++.|++.+...+...+++.++++ ++ |+++.++.+.+.++|..++|.+++.+.+.+
T Consensus 105 -------~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~------r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~ 170 (455)
T TIGR00892 105 -------SNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RR------RPLANGLAMAGSPVFLSTLAPLNQYLFESF 170 (455)
T ss_pred -------hhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hh------HHHHHHHHHhcccHHHHHHHHHHHHHHHHh
Confidence 35666554 5688899998776677788888885 56 999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHhc
Q 007736 216 GREWGYGICACAIVFGLVVFLSG 238 (591)
Q Consensus 216 g~~~~f~~~~~~~~~~~~~~~~~ 238 (591)
|||++|++.+++.+++.+..++.
T Consensus 171 gwr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 171 GWRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999887665554444433
No 43
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.90 E-value=1.8e-22 Score=220.66 Aligned_cols=398 Identities=13% Similarity=0.090 Sum_probs=243.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHH
Q 007736 34 AAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGV 113 (591)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 113 (591)
+..+.+..++...........+|. +.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIPT-IAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHH
Confidence 344555566666665555555554 4578999999999999999999999999999999998 99999999999999999
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhh
Q 007736 114 TILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWF 193 (591)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 193 (591)
++++.+ ++...+.++|+++|++.+...+...+++.|.+|+++ |+++.+++
T Consensus 82 ~~~~~~------------------------~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~ 131 (485)
T TIGR00711 82 LLCGVA------------------------PNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK------RGRAMAIW 131 (485)
T ss_pred HHHhCc------------------------CCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH------HHHHHHHH
Confidence 988876 478889999999999999999999999999999988 99999999
Q ss_pred HHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCC-ChhhHHHHHH-HHHHhhcccCCC
Q 007736 194 FFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVG-SPLTQIASVF-VVAWRKRHLDLP 271 (591)
Q Consensus 194 ~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~ 271 (591)
+....+|..++|.+++++.+++||++.|++.....++..+......++.++++.++ +......... .........+..
T Consensus 132 ~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~ 211 (485)
T TIGR00711 132 GLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGP 211 (485)
T ss_pred HHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999999999999877655555444444333322111111 1111100000 000000000000
Q ss_pred CCCCCcccccCCccccccccccCCCCcchhh-hHHh----h-hccCCCCCccccccccccccCccchhHHHHHHHHHHHH
Q 007736 272 SDPSMFFNIDDIPVEGKKTKQRLPHTKQFRF-LDKA----A-IFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPI 345 (591)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (591)
+. ...+....... .... . ...+.. .+.|.. ..+..++++........
T Consensus 212 ~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~--~~~~~~~~~~~~~~~~~ 264 (485)
T TIGR00711 212 ER------------------GWFDSNEILILSITGLVAIIAFVVWELT-------DDNPLV--DLRLFKYRNFTIGCVYM 264 (485)
T ss_pred CC------------------CCCCchHHHHHHHHHHHHHHHHHHHHHc-------CCCCcc--CHHHHcCCChHHHHHHH
Confidence 00 00000000000 0000 0 000000 001100 00000111111111112
Q ss_pred HHHHHHHHHHhccccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHH
Q 007736 346 WATTIIFWTVYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGV 425 (591)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~ 425 (591)
+.....++......+.++.. ..+.+ ....+.......+..+++.++.+++.+|..+| +.+.+
T Consensus 265 ~~~~~~~~~~~~~~p~~~~~-~~g~s------~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-----------~~~~~ 326 (485)
T TIGR00711 265 SLLGLGLYGSFYLLPLYLQQ-VLGYT------ALQAGLHILPVGLAPMLSSPIAGRMGDKIDPR-----------KLVTI 326 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcH-----------HHHHH
Confidence 22222222222222222211 11111 11123333344455556666666666443332 45677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHH
Q 007736 426 GLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGL 505 (591)
Q Consensus 426 g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl 505 (591)
|..+.+++..++..... ...+.+.++...++.|++.++..+.......+..|++.+++++|+
T Consensus 327 g~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~ 388 (485)
T TIGR00711 327 GLILYAVGFYWRAFTFT------------------PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSL 388 (485)
T ss_pred HHHHHHHHHHHHhccCC------------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHH
Confidence 77777777776652100 123444455667888999988887777777888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhc
Q 007736 506 FLSTLSLGFFVSSLLVSLVHK 526 (591)
Q Consensus 506 ~~~~~~lg~~lg~~l~~~i~~ 526 (591)
.++.+.+|+.+|+.+.+.+.+
T Consensus 389 ~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 389 SNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998875
No 44
>PRK03699 putative transporter; Provisional
Probab=99.90 E-value=1.4e-21 Score=208.37 Aligned_cols=172 Identities=12% Similarity=0.092 Sum_probs=144.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHH
Q 007736 29 GGWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATV 108 (591)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~ 108 (591)
+++|-++...+..++...........+|. +.+++|+|..+.+++.+.+.+++.++.++.|+++||+ |||+++.++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGP-IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHH
Confidence 34566677767777776666666665655 5678999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccch
Q 007736 109 QAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTN 188 (591)
Q Consensus 109 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 188 (591)
.+++.++++++ .+...+++.|+++|++.+...+...+++.|.+|+++ |++
T Consensus 82 ~~i~~~l~~~~------------------------~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~------r~~ 131 (394)
T PRK03699 82 MILAVAGLMFS------------------------HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ------RGS 131 (394)
T ss_pred HHHHHHHHHHc------------------------chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch------HHH
Confidence 99998888875 477888999999999999888888999999999888 999
Q ss_pred hhhhhHHHHhhchhhhhhhhhhhcc-ccccchhHHHHHHHHHHHH
Q 007736 189 FFNWFFFFISIGSLAAVTVLVYIQD-NLGREWGYGICACAIVFGL 232 (591)
Q Consensus 189 ~~~~~~~~~~ig~~~~p~i~~~l~~-~~g~~~~f~~~~~~~~~~~ 232 (591)
..+..+...++|+.++|.+.+.+.. ..|||+.|.+.++..++..
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~ 176 (394)
T PRK03699 132 RLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIF 176 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH
Confidence 9998888888999999998887754 5799999987766544443
No 45
>PRK09952 shikimate transporter; Provisional
Probab=99.90 E-value=1.3e-21 Score=211.53 Aligned_cols=175 Identities=9% Similarity=0.065 Sum_probs=132.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--CCChHHHHHHH-----HHHHHHHHHHHhhhHHHhhhhchhHHHH
Q 007736 30 GWTSAAMILGGEACERLTTLGIAVNLVTYLTGTM--HLGNASAANTV-----TNFLGTSFMLCLLGGFIADTFLGRYLTI 102 (591)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~--~~~~~~~~~~~-----~~~~~~~~i~~~~~G~laD~~~Grk~~~ 102 (591)
+++.+...++..+++.+....+....+.++.+++ +.++. .+++. +...++..++.++.|+++||+ |||+++
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~~l 97 (438)
T PRK09952 20 ARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHHHH
Confidence 3556667777778887777766666666666555 56665 34443 234456678889999999998 999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhh
Q 007736 103 AIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQE 182 (591)
Q Consensus 103 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 182 (591)
.++.++++++.++++++.+...+ .......+++.|+++|++.|+..+....++.|++|+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~--- 158 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTI----------------GWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNK--- 158 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHH----------------HHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCC---
Confidence 99999999999999987221000 00012357889999999999999999999999999998
Q ss_pred hhccchhhhhhHHHHhhchhhhhhhhhhhc--------cccccchhHHHHHHHH
Q 007736 183 RNQMTNFFNWFFFFISIGSLAAVTVLVYIQ--------DNLGREWGYGICACAI 228 (591)
Q Consensus 183 ~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~--------~~~g~~~~f~~~~~~~ 228 (591)
|++..+..+.+..+|..++..+...+. +.+|||++|++.++..
T Consensus 159 ---rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~ 209 (438)
T PRK09952 159 ---KAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLV 209 (438)
T ss_pred ---CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHH
Confidence 999999988888888888877666554 3579999998876643
No 46
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.90 E-value=9.9e-22 Score=203.90 Aligned_cols=345 Identities=19% Similarity=0.261 Sum_probs=256.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHH
Q 007736 35 AMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVT 114 (591)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~ 114 (591)
+.+....++.....+...+.++.|.+ ++|.+..+.+++.+...++..++.++.|+++||+ |||+.+.++.++..++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~ 79 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAE-DLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSL 79 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHH
Confidence 34566777888888888888888875 5799999999999999999999999999999998 999999999999999998
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhH
Q 007736 115 ILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFF 194 (591)
Q Consensus 115 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 194 (591)
++... .+...+++.|++.|++.+...+...+++.|.+|+++ |++.+++.+
T Consensus 80 ~~~~~------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 129 (352)
T cd06174 80 LLAFA------------------------SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE------RGRALGLFS 129 (352)
T ss_pred HHHHh------------------------ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc------hhhhhhHHH
Confidence 88876 478889999999999999999999999999999998 999999999
Q ss_pred HHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccCCCCCC
Q 007736 195 FFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLDLPSDP 274 (591)
Q Consensus 195 ~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (591)
...++|..++|.+++.+.+..+|++.+++..+..++..+......
T Consensus 130 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------- 174 (352)
T cd06174 130 AGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL----------------------------------- 174 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------
Confidence 999999999999999999988999999888766555544432211
Q ss_pred CCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHH-HHHHHHHHHHH
Q 007736 275 SMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRM-LPIWATTIIFW 353 (591)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 353 (591)
|.+... ...+.......
T Consensus 175 --------------------------------------------------------------~~~~~~~~~~~~~~~~~~ 192 (352)
T cd06174 175 --------------------------------------------------------------RLLLLLALAFFLLSFGYY 192 (352)
T ss_pred --------------------------------------------------------------HHHHHHHHHHHHHHhHHH
Confidence 000000 11111111111
Q ss_pred HHhccccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchh-HHHHHHHHHHH
Q 007736 354 TVYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQ-RIGVGLVLSIF 432 (591)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~-~i~~g~~~~~~ 432 (591)
......+.+... ..+.+ ....+.......+...+..++.+++.+|..+| + .+.++..+..+
T Consensus 193 ~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~i 254 (352)
T cd06174 193 GLLTYLPLYLQE-VLGLS------AAEAGLLLSLFGLGGILGALLGGLLSDRLGRR-----------RLLLLIGLLLAAL 254 (352)
T ss_pred HHHHHHHHHHHH-hcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----------hHHHHHHHHHHHH
Confidence 111111111111 00111 11123344455556666667777766554443 3 57778888888
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHH
Q 007736 433 AMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSL 512 (591)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~l 512 (591)
+.+.+.... +.+.+.+..++.+++.+...+....++.|..|++.|++.+|+.+....+
T Consensus 255 ~~~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (352)
T cd06174 255 GLLLLALAP----------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSL 312 (352)
T ss_pred HHHHHHHhc----------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence 877776531 3555667788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHH
Q 007736 513 GFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIY 562 (591)
Q Consensus 513 g~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~ 562 (591)
+..+++.+.+.+.+.. + +...+++.+++++++.++.
T Consensus 313 ~~~i~~~i~g~l~~~~----~----------~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 313 GGALGPLLAGLLLDTG----G----------YGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHhccc----C----------cchHHHHHHHHHHHHHHHh
Confidence 9999999999987532 1 2345667777777766544
No 47
>TIGR00895 2A0115 benzoate transport.
Probab=99.90 E-value=8.1e-22 Score=208.73 Aligned_cols=179 Identities=13% Similarity=0.104 Sum_probs=145.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHH
Q 007736 30 GWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQ 109 (591)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~ 109 (591)
.|+.+...++..++.......... ..+++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~ 92 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMGF-AAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILLF 92 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-hHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHHH
Confidence 344444444555555555544444 44455678999999999999999999999999999999998 9999999999988
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchh
Q 007736 110 AAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNF 189 (591)
Q Consensus 110 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 189 (591)
+++.+++.+. .+.+.+++.+++.|++.+...+...+++.|.+|+++ |+++
T Consensus 93 ~~~~~~~~~~------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~ 142 (398)
T TIGR00895 93 SVFTLLCALA------------------------TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF------RGTA 142 (398)
T ss_pred HHHHHHHHHc------------------------cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh------hchh
Confidence 8888887765 467788899999999999999999999999999988 9999
Q ss_pred hhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCC
Q 007736 190 FNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTR 240 (591)
Q Consensus 190 ~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 240 (591)
+++.+.+.++|..++|.+++++.+..||+..|++.++..++..+..+...+
T Consensus 143 ~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 193 (398)
T TIGR00895 143 VGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLP 193 (398)
T ss_pred HhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999998875444444333333333
No 48
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.90 E-value=1.1e-21 Score=207.49 Aligned_cols=176 Identities=13% Similarity=0.062 Sum_probs=147.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQA 110 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~ 110 (591)
++.++.+....+....+.....+.+|. +.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 81 (385)
T TIGR00710 4 KAFALLLGCLSILGPLGIDMYLPAFPE-IAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIFA 81 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHH
Confidence 444444555555555555555555554 5678999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhh
Q 007736 111 AGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFF 190 (591)
Q Consensus 111 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 190 (591)
++.+++..+ ++...+++.|++.|++.+...+...+++.|.+|+++ |++.+
T Consensus 82 ~~~~~~~~~------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 131 (385)
T TIGR00710 82 LSSLGLALS------------------------NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEE------LSRIY 131 (385)
T ss_pred HHHHHHHHH------------------------ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH------HHHHH
Confidence 988888776 477888999999999999999999999999999988 99999
Q ss_pred hhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhc
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSG 238 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 238 (591)
++.+....+|..++|.+++++.+..+|++.|++.++..++..+..+..
T Consensus 132 ~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (385)
T TIGR00710 132 SILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFI 179 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998999999988776655554444433
No 49
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.90 E-value=9.1e-22 Score=214.39 Aligned_cols=147 Identities=6% Similarity=0.069 Sum_probs=128.7
Q ss_pred hcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccccc
Q 007736 62 TMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQA 141 (591)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (591)
+++++..+.+++.+.+.+++.++.+++|+++||+ |||+++.++.++..++.+++..+..
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-------------------- 128 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAG-------------------- 128 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHH--------------------
Confidence 6889999999999999999999999999999998 9999999999988888877654421
Q ss_pred chhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhcccc-ccchh
Q 007736 142 SGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDNL-GREWG 220 (591)
Q Consensus 142 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~-g~~~~ 220 (591)
.+...+++.|+++|++.+...+....+++|++|+++ |+++.++.+.+.++|..++|.+++++.+.. ||++.
T Consensus 129 --~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~ 200 (465)
T TIGR00894 129 --GGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMI 200 (465)
T ss_pred --cCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCee
Confidence 246678899999999999999999999999999999 999999999999999999999999999884 99999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 007736 221 YGICACAIVFGLVVFLS 237 (591)
Q Consensus 221 f~~~~~~~~~~~~~~~~ 237 (591)
|++.++..++..+.++.
T Consensus 201 f~i~~~~~~~~~~~~~~ 217 (465)
T TIGR00894 201 FYVFGIVGCAWSLLWFV 217 (465)
T ss_pred hhhhhHHHHHHHHHHHH
Confidence 99887765554444433
No 50
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.90 E-value=1.5e-21 Score=207.16 Aligned_cols=156 Identities=12% Similarity=0.128 Sum_probs=139.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQA 110 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~ 110 (591)
.+.++.++...++...+...+.+.+|.|+. ++|.|..+.+++.+.+.++..+++++.|+++||+ |||+++..+.++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~ 82 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHH
Confidence 456888889999999998889999999986 6899999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhh
Q 007736 111 AGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFF 190 (591)
Q Consensus 111 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 190 (591)
++..+++++ ++.+.++++|+++|++.+...+...+.+.|..++++ |++.+
T Consensus 83 ~~~~~~~~~------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 132 (381)
T PRK03633 83 AGCAGLGLM------------------------VGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN------RGRLL 132 (381)
T ss_pred HHHHHHHHh------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHH
Confidence 998888776 578889999999999999888887788888888887 99999
Q ss_pred hhhHHHHhhchhhhhhhhhhhccccccc
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDNLGRE 218 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~~g~~ 218 (591)
++++.+.++|..+||.+++.+.+...+.
T Consensus 133 ~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 160 (381)
T PRK03633 133 AAYMMVYYLGTVLGQLLVSKVSTELMSV 160 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccch
Confidence 9999999999999999999987754333
No 51
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.90 E-value=4.2e-21 Score=205.25 Aligned_cols=171 Identities=13% Similarity=0.068 Sum_probs=142.6
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHH
Q 007736 28 TGGWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFAT 107 (591)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~ 107 (591)
...||++....+..++...+.+....+++.++ +++|++..+.+++.+.+.++..++.++.|+++||+ ||||++..+..
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~ 86 (402)
T TIGR00897 9 IGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLL 86 (402)
T ss_pred cCCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHH
Confidence 34567888888999998888888888899988 56899999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccc
Q 007736 108 VQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMT 187 (591)
Q Consensus 108 ~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 187 (591)
+.+++.+++...... ..+...+++.|++.|+|.+...+...+.+.+.+|+++ |+
T Consensus 87 ~~~~~~~~~~~~~~~--------------------~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~------~g 140 (402)
T TIGR00897 87 LWCVGHAAFIVFGLG--------------------HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN------LS 140 (402)
T ss_pred HHHHHHHHHHHHhcc--------------------CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH------HH
Confidence 888887655321100 0256777889999999988877777788889999988 99
Q ss_pred hhhhhhHHHHhhch-hhhhhhhhhhccccccchhHHHHHH
Q 007736 188 NFFNWFFFFISIGS-LAAVTVLVYIQDNLGREWGYGICAC 226 (591)
Q Consensus 188 ~~~~~~~~~~~ig~-~~~p~i~~~l~~~~g~~~~f~~~~~ 226 (591)
++.++.+.+.++|. .++|.+++++.+.+||+..++....
T Consensus 141 ~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~ 180 (402)
T TIGR00897 141 SAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALA 180 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 99999999999996 5899999999888897666655443
No 52
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.90 E-value=2.8e-21 Score=205.98 Aligned_cols=178 Identities=12% Similarity=0.027 Sum_probs=130.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHH-HHHHHHhhhHHHhhhhchhHHHHH-HHHHH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLG-TSFMLCLLGGFIADTFLGRYLTIA-IFATV 108 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~G~laD~~~Grk~~~~-~~~~~ 108 (591)
....+..++..++.+.+.....+.++.|+++++|++.++.+++.+...+ +..++.+++|+ +||+ ||||.++ .+.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~ 91 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLL 91 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHH
Confidence 3455777888999999999999999999999999999999999876655 55555555666 9998 9988754 44555
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhcc--
Q 007736 109 QAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQM-- 186 (591)
Q Consensus 109 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r-- 186 (591)
..++..+.+++ .+.+.+++.+.+.+...+...+....+..|..++++ |
T Consensus 92 ~~~~~~~~~~~------------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 141 (393)
T PRK15011 92 GVLACTLFAWN------------------------RNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTG------REA 141 (393)
T ss_pred HHHHHHHHHHh------------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhcc------chH
Confidence 55666666654 456665555444443344556777777778766655 4
Q ss_pred chhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCC
Q 007736 187 TNFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTR 240 (591)
Q Consensus 187 ~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 240 (591)
+...++.+.+.++|..++|.+++++.+++|||..|++.++..++..+..+...+
T Consensus 142 ~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 195 (393)
T PRK15011 142 VMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLP 195 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcC
Confidence 344577888899999999999999999999999998887665555444444344
No 53
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.89 E-value=2.2e-22 Score=214.05 Aligned_cols=400 Identities=12% Similarity=0.069 Sum_probs=245.6
Q ss_pred HHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHH
Q 007736 71 ANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLY 150 (591)
Q Consensus 71 ~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (591)
+.+++.+.+++++++.+.|+++||+ |||..+.+..++..++.+++.++... ++..++.
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~---------------------~~~e~li 120 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSA---------------------PSFEMLI 120 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHh---------------------hhHHHHH
Confidence 4457778999999999999999998 99999999999988888888877543 4888999
Q ss_pred HHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhh-hhc-cccccchhHHHHHHHH
Q 007736 151 IALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLV-YIQ-DNLGREWGYGICACAI 228 (591)
Q Consensus 151 ~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~-~l~-~~~g~~~~f~~~~~~~ 228 (591)
++|++.|+..|......+.++.|..|++. ||..-.+..++..+|..++..++. .+. ....|.+.+.+..+..
T Consensus 121 ~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~ 194 (485)
T KOG0569|consen 121 LGRLIVGLACGLSTGLVPMYLTEISPKNL------RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPA 194 (485)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhhcChhhh------ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999 999999999999999999955543 333 3345888887777665
Q ss_pred HHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccCCCCCCCCccc-ccCCccccccccccCCCCcchhhhHHhh
Q 007736 229 VFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLDLPSDPSMFFN-IDDIPVEGKKTKQRLPHTKQFRFLDKAA 307 (591)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (591)
++.++.+.+ .||+|++++. ++|.++| +++...+...++....+...
T Consensus 195 ~~~l~~l~~--------------------------------~PESPk~Ll~~k~~~~~A-~~sl~~y~G~~~~~~~~e~~ 241 (485)
T KOG0569|consen 195 LLQLALLPF--------------------------------LPESPKYLLIKKGDEEEA-RKALKFYRGKEDVEAEIEEM 241 (485)
T ss_pred HHHHHHHhc--------------------------------CCCCcchHHHHcCCHHHH-HHHHHHHhCCCcchhHHHHH
Confidence 555444333 2334444443 3333333 33333333222111111110
Q ss_pred hccCCCCCccccccccccccCccchhHHHHHHHHHHHHHHHHHHHHHHhccccceeeeee--ccccccccccccc-cccc
Q 007736 308 IFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPIWATTIIFWTVYAQMTTFSVSQA--TTMNRHIGSFEIP-GASL 384 (591)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~-~~~~ 384 (591)
.....+.+.+.+.+...+++..++. .++.+...+.+ ....|..+...... ...-.+. |+..+ +...
T Consensus 242 ~~e~~~~~~~~~~~~sl~~~~~~~~--lR~~~~i~~~v--------~~~qq~sGi~ai~~Yst~i~~~a-G~~~~~a~~a 310 (485)
T KOG0569|consen 242 LREIEEEELEKKKQISLRQLLKNPT--LRRPLLIGIVV--------SFAQQFSGINAIFFYSTSIFKTA-GFTPEEAQYA 310 (485)
T ss_pred HHHHHHhccccccCCcHHHHhcCcc--hhHHHHHHHHH--------HHHHHhcCcceeHHHHHHHHHHc-CCCHHHHHHH
Confidence 0000000000000111111111111 11111111111 11111111111100 0000000 11111 1122
Q ss_pred cccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccch
Q 007736 385 TFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLS 464 (591)
Q Consensus 385 ~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 464 (591)
+.......++...+..++++|.+|| +.++.+..++.+..+++.......... .+.-
T Consensus 311 n~~~g~v~~~~t~~~~~lid~~gRR-----------pLll~~~~~~~~~~~~~~~~~~l~~~~-------------~~~~ 366 (485)
T KOG0569|consen 311 NLGIGIVNLLSTLVSPFLIDRLGRR-----------PLLLISLSLMAVALLLMSIALFLSNSF-------------GSWL 366 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCc-----------HHHHHHHHHHHHHHHHHHHHHHHHHHh-------------hhHH
Confidence 2222333344444555556555555 567888888888877776653221100 0111
Q ss_pred hhHHHHHHHHHHHHHHHH-hhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcc
Q 007736 465 VFWLVPQFFLVGAGEAFT-YIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGR 543 (591)
Q Consensus 465 ~~~li~~~~l~g~g~~~~-~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~ 543 (591)
.+..+...+++.+++.+. .|..+-+++|.+|++.|..+++.....+++.+++-....+.+.+..| +
T Consensus 367 ~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g---~---------- 433 (485)
T KOG0569|consen 367 SYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG---P---------- 433 (485)
T ss_pred HHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---c----------
Confidence 223355556666666655 47788899999999999999999999999999999999999986543 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccc
Q 007736 544 LYDFYWLLAILSALNFVIYLAFARWYVYKDKRLAEEGI 581 (591)
Q Consensus 544 ~~~~f~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 581 (591)
.+|..+.+.+.+..+..++..||+|+|+..++.++.
T Consensus 434 --~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~ 469 (485)
T KOG0569|consen 434 --YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEEL 469 (485)
T ss_pred --hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHH
Confidence 468899999999999999999999999887665443
No 54
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.89 E-value=1.3e-21 Score=207.81 Aligned_cols=175 Identities=10% Similarity=0.099 Sum_probs=152.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQA 110 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~ 110 (591)
++.++.+.+..++.....+...+.+|.+ ++++|.+.++.+++.+.+.+++.+++++.|+++||+ |||+++.++..+.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~ 79 (382)
T PRK10091 2 KKVILSLALGTFGLGMAEFGIMGVLTEL-AHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCV 79 (382)
T ss_pred cchHHHHHHHHHHHHhhHHHHHhChHHH-HHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHH
Confidence 3467778888888888888878877765 568999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhh
Q 007736 111 AGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFF 190 (591)
Q Consensus 111 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 190 (591)
++.++++++ ++.+.+++.|++.|++.+...+....++.|++|+++ |++++
T Consensus 80 ~~~~l~~~~------------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 129 (382)
T PRK10091 80 IGNAMFTLS------------------------SSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK------VTAAV 129 (382)
T ss_pred HHHHHHHHh------------------------CcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH------hhHHH
Confidence 999988886 588999999999999999888888888999999888 99999
Q ss_pred hhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHh
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLS 237 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 237 (591)
+++..+..+|..++|.+++++.+..|||+.|++.++..++..+..+.
T Consensus 130 ~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 176 (382)
T PRK10091 130 AGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYF 176 (382)
T ss_pred HHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999899999999887655544443333
No 55
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.89 E-value=1.4e-21 Score=214.52 Aligned_cols=167 Identities=18% Similarity=0.212 Sum_probs=145.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHH
Q 007736 29 GGWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATV 108 (591)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~ 108 (591)
.+|+.+..+.+..++..+........++ ++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLT-EVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHH
Confidence 3556666777777777776666655554 56678999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccch
Q 007736 109 QAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTN 188 (591)
Q Consensus 109 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 188 (591)
.+++.+++++. .+.+.+++.|++.|++.++..+...+++.|.+|+++ |++
T Consensus 95 ~~~~~~~~~~~------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~ 144 (496)
T PRK03893 95 FSVGTLACGFA------------------------PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL------RNK 144 (496)
T ss_pred HHHHHHHHHHH------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHH
Confidence 99999888876 478889999999999999999999999999999998 999
Q ss_pred hhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHH
Q 007736 189 FFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACA 227 (591)
Q Consensus 189 ~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~ 227 (591)
+.++.+.+.++|..++|.+.+.+.+.+||++.|++.++.
T Consensus 145 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~ 183 (496)
T PRK03893 145 ASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILP 183 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 999999999999999999999999999999998875443
No 56
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.89 E-value=4.4e-21 Score=204.31 Aligned_cols=172 Identities=15% Similarity=0.083 Sum_probs=144.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHH
Q 007736 30 GWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQ 109 (591)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~ 109 (591)
.+|..+......++..+......+.+|.+ .+++|.++.+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~~ 83 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADM-ARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSIF 83 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHH
Confidence 45666666666666666666556666655 568999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchh
Q 007736 110 AAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNF 189 (591)
Q Consensus 110 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 189 (591)
.++.+++..+ .+...+++.|++.|++.+...+....+..|.+++++ ++++
T Consensus 84 ~~~~~~~~~~------------------------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~ 133 (394)
T PRK11652 84 ILGTLVALFA------------------------HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ------LRHA 133 (394)
T ss_pred HHHHHHHHHH------------------------ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH------HHHH
Confidence 9888888765 477888999999999988877777888889888887 8999
Q ss_pred hhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHH
Q 007736 190 FNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLV 233 (591)
Q Consensus 190 ~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~ 233 (591)
.++.+.+..++..++|.+++.+.+..||++.|++.++..++..+
T Consensus 134 ~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~ 177 (394)
T PRK11652 134 NSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTF 177 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999889999999887665444333
No 57
>TIGR00898 2A0119 cation transport protein.
Probab=99.89 E-value=1.7e-21 Score=214.35 Aligned_cols=386 Identities=13% Similarity=0.081 Sum_probs=230.1
Q ss_pred HHhhhhcCCC---hHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 007736 57 TYLTGTMHLG---NASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLN 133 (591)
Q Consensus 57 ~yl~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 133 (591)
..+.+++|++ ..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.+++.++.+++
T Consensus 113 ~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~-------------- 177 (505)
T TIGR00898 113 STIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFS-------------- 177 (505)
T ss_pred ccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHc--------------
Confidence 3456789998 89999999999999999999999999997 99999999999999998888876
Q ss_pred CCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhcc
Q 007736 134 HGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQD 213 (591)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~ 213 (591)
.+++.+++.|++.|++.++..+...+++.|++|+++ |+++.++...+..+|.+++|.++..+.+
T Consensus 178 ----------~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 241 (505)
T TIGR00898 178 ----------PNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------RAIVGTLIQVFFSLGLVLLPLVAYFIPD 241 (505)
T ss_pred ----------ccHHHHHHHHHHHHhhccchHHHHHHHhheecChhh------hHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 588899999999999999999999999999999999 9999999988999999999988766653
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccCCCCCCCCcccccCCcccccccccc
Q 007736 214 NLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLDLPSDPSMFFNIDDIPVEGKKTKQR 293 (591)
Q Consensus 214 ~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (591)
||+.|++.++..++..+..+ ..++.+.....+...++..+.+....+..+...+++ ..+
T Consensus 242 ---wr~~~~~~~i~~~~~~~~~~-~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~---~~~-------------- 300 (505)
T TIGR00898 242 ---WRWLQLAVSLPTFLFFLLSW-FVPESPRWLISQGRIEEALKILQRIAKINGKKLPAE---VLS-------------- 300 (505)
T ss_pred ---HHHHHHHHHHHHHHHHHHHH-hcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHH---HHh--------------
Confidence 99999888766555544443 333321110011111222222222222211111000 000
Q ss_pred CCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHHH-HHHHHHHHHHhccccceeeeeeccccc
Q 007736 294 LPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPI-WATTIIFWTVYAQMTTFSVSQATTMNR 372 (591)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (591)
..... +... . ..+..+ .+....+.+...... +.........+... ..+.. .
T Consensus 301 ---------~~~~~---~~~~---~-~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~----- 352 (505)
T TIGR00898 301 ---------LSLEK---DLSS---S-KKQYSF-----LDLFRTPNLRKTTLCLMMLWFTTAFSYYGL-VLDLG-N----- 352 (505)
T ss_pred ---------hhhhh---hhhh---c-cCCCcH-----HHHhCChHHHHHHHHHHHHHHHHHHHHHHH-hcccc-c-----
Confidence 00000 0000 0 000000 000001111111111 11000000111000 11110 0
Q ss_pred cccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 007736 373 HIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHG 452 (591)
Q Consensus 373 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g 452 (591)
+ +.+.........+..+....+..++.+|++|| +.+.+++++.+++++++....
T Consensus 353 -~---~~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr-----------~~~~~~~~~~~~~~l~~~~~~----------- 406 (505)
T TIGR00898 353 -L---GGNIYLDLFISGLVELPAKLITLLLIDRLGRR-----------YTMAASLLLAGVALLLLLFVP----------- 406 (505)
T ss_pred -c---CCChHHHHHHHHHHHHHHHHHHHHHHHHhCCH-----------HHHHHHHHHHHHHHHHHHHcC-----------
Confidence 0 00111111222233334444555555544443 446677777777766665531
Q ss_pred CCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 007736 453 LTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKK 532 (591)
Q Consensus 453 ~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~ 532 (591)
....++.+...++.+++.....+..+.+..|.+|++.|++++|+.+....+|+.+++.+.+ +.+..
T Consensus 407 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~~---- 472 (505)
T TIGR00898 407 ---------VDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEKW---- 472 (505)
T ss_pred ---------CCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHHH----
Confidence 1122333444556666677777888889999999999999999999999999999999988 43210
Q ss_pred CccccccCCcchHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Q 007736 533 PWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWYVYKDK 574 (591)
Q Consensus 533 ~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~~~ 574 (591)
....++++++.++++.++. ++.++++++..
T Consensus 473 -----------~~~~~~~~~~~~~~~~~~~-~~lpet~~~~l 502 (505)
T TIGR00898 473 -----------LFLPLVLFGGLALLAGILT-LFLPETKGVPL 502 (505)
T ss_pred -----------HhhHHHHHHHHHHHHHHHH-HcCcCCCCCCC
Confidence 1234666666666665544 34566665543
No 58
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.89 E-value=1e-20 Score=203.03 Aligned_cols=151 Identities=11% Similarity=0.088 Sum_probs=132.3
Q ss_pred hhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 007736 59 LTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSC 138 (591)
Q Consensus 59 l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~ 138 (591)
+.+++|.+..+.++..+.+.+++.++.++.|+++||+ |||+++..+.++.+++.++++.+
T Consensus 42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a------------------- 101 (413)
T PRK15403 42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFT------------------- 101 (413)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHc-------------------
Confidence 5678999999999999999999999999999999998 99999999999999999888876
Q ss_pred cccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccccccc
Q 007736 139 IQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDNLGRE 218 (591)
Q Consensus 139 ~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~ 218 (591)
.+...++++|+++|++.+...+....++.|.+|+++ |++.+++.+...++|..+||.+++.+.+..||+
T Consensus 102 -----~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~ 170 (413)
T PRK15403 102 -----TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK------GIKLMAIITSIVLVAPIIGPLSGAALMHFVHWK 170 (413)
T ss_pred -----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 578889999999999988766667788899999988 999999999999999999999999999888999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCC
Q 007736 219 WGYGICACAIVFGLVVFLSGTR 240 (591)
Q Consensus 219 ~~f~~~~~~~~~~~~~~~~~~~ 240 (591)
+.|++.++..+++.+..++..+
T Consensus 171 ~~f~~~~~~~~i~~~~~~~~lp 192 (413)
T PRK15403 171 VLFAIIAVMGLIAFVGLLLAMP 192 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC
Confidence 9999887766555544333333
No 59
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.89 E-value=3.5e-21 Score=205.18 Aligned_cols=164 Identities=13% Similarity=0.165 Sum_probs=136.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
|+++.+....++.+++.......++.. .+++|.+..+.+++.+.+.+.+.++.++.|+++||+ ||||++.++.++.++
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~ 80 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLL 80 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHH
Confidence 356667777888777665555555554 568899999999999999999999999999999998 999999999999988
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
+.+++... .+. ++.|+++|++.+...|...+++.|++|+++ |+++.+
T Consensus 81 ~~~~~~~~------------------------~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~------~~~a~~ 127 (393)
T PRK11195 81 GCLLMLFG------------------------IHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEK------LVKANG 127 (393)
T ss_pred HHHHHHHH------------------------HHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHH
Confidence 88777654 232 678999999999999999999999999998 999999
Q ss_pred hhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHH
Q 007736 192 WFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFG 231 (591)
Q Consensus 192 ~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~ 231 (591)
+.+...++|..+||.++|++.+. .|+..+.+.+.+.+++
T Consensus 128 ~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~ 166 (393)
T PRK11195 128 WMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLA 166 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 99999999999999999999875 3666666555443333
No 60
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.89 E-value=2.1e-21 Score=208.64 Aligned_cols=392 Identities=11% Similarity=0.003 Sum_probs=224.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
+.+|...+..++...++....++++.|+++++|++..+.+.+.+.+.++..+++++.|+++||+ ||||++.++..+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLV 88 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence 4677777888888888888999999999999999999999999999999999999999999998 999999887666554
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHH-HHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLV-VLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFF 190 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 190 (591)
+.......... .... ....+..+.++..+.........+.++.++.. .+++..+
T Consensus 89 ~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~ 143 (420)
T PRK09528 89 LFGPFFIYVFA---------------------PLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVS----RRSGFEY 143 (420)
T ss_pred HHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHH----hhccccc
Confidence 43322111000 0000 11112222233333322233333333332111 1167778
Q ss_pred hhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccCC
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLDL 270 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (591)
+..+...++|..++|.+++++.+ .+|+..|++.++..++..+..+...++.++++..+++
T Consensus 144 g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 203 (420)
T PRK09528 144 GRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANA------------------- 203 (420)
T ss_pred hhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccchhhhccc-------------------
Confidence 88888889999999999998876 4899999887766555544443332221111000000
Q ss_pred CCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHH-HHHHH
Q 007736 271 PSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLP-IWATT 349 (591)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 349 (591)
+ +.. ++.. ...+..... + .+.++.... .....
T Consensus 204 ~----------------~~~----~~~~--~~~~~~~~l------------~-------------~~~~~~l~l~~~~~~ 236 (420)
T PRK09528 204 L----------------GAN----ASAV--SLKDALALL------------K-------------LPKFWFLVLYVIGVA 236 (420)
T ss_pred h----------------hcc----cccc--cHHHHHHHc------------c-------------CCCeEeehHHHHHHH
Confidence 0 000 0000 000000000 0 000101111 11111
Q ss_pred HHHHHHhccccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHH
Q 007736 350 IIFWTVYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVL 429 (591)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~ 429 (591)
..+.....+.+.++.... .+.+.+ ....+.......+...++.++.+++.+|+.+| +.+..+.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~-----------~~~~~~~~l 301 (420)
T PRK09528 237 CFYDVFDQQFPNFFASFF--ATPEQG--TRVFGYLNSFQVFLEALIMFFAPFIINRIGAK-----------NALLLAGTI 301 (420)
T ss_pred HHHHHHHHHHHHHHHHHH--hccCcc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-----------hhhHHHHHH
Confidence 111122222222221110 000100 00012223333334445555666666444433 346667777
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHH-HHH
Q 007736 430 SIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGL-FLS 508 (591)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl-~~~ 508 (591)
.+++.+++.+. .+.+.++...++.+++.....+....++.+..|++.+++..+. +++
T Consensus 302 ~~~~~~l~~~~----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 359 (420)
T PRK09528 302 MAVRIIGSGFA----------------------TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQF 359 (420)
T ss_pred HHHHHHHHHhc----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHH
Confidence 77776666543 1344555667778888877777778889999999999988765 677
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 007736 509 TLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFAR 567 (591)
Q Consensus 509 ~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~ 567 (591)
...+|..+++.+.|++.+..| +...|...+++.++..++.++..+
T Consensus 360 ~~~lg~~ig~~~~G~l~~~~G--------------~~~~f~~~~~~~~i~~~~~~~~~~ 404 (420)
T PRK09528 360 AKQLGAVFLSTLAGNLYDSIG--------------FQGTYLILGGIVLLFTLISVFTLS 404 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhhC--------------chHHHHHHHHHHHHHHHHHHHHhc
Confidence 789999999999999986432 335677777777777665555443
No 61
>PRK15075 citrate-proton symporter; Provisional
Probab=99.88 E-value=8.8e-21 Score=204.83 Aligned_cols=172 Identities=11% Similarity=0.072 Sum_probs=127.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHH-HHH-----HHHHHHHHhhhHHHhhhhchhHHHHHH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTV-TNF-----LGTSFMLCLLGGFIADTFLGRYLTIAI 104 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~-~~~-----~~~~~i~~~~~G~laD~~~Grk~~~~~ 104 (591)
++.....++..+++.+....+....| .+.++++.+..+.+... +.. .+...+++++.|+++||+ ||||.++.
T Consensus 14 ~~~~~~~~~~~~~~~~d~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 91 (434)
T PRK15075 14 ARAILRVTSGNFLEMFDFFLFGFYAT-AIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGLIV 91 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHHHH
Confidence 44556666667777766666554444 67778888877655433 222 222246789999999998 99999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhh
Q 007736 105 FATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERN 184 (591)
Q Consensus 105 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 184 (591)
+.+++.++.++++++.+...++ ......++++|+++|++.+...+....+++|++|+++
T Consensus 92 ~~~~~~~~~~l~~~~~~~~~~~----------------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~----- 150 (434)
T PRK15075 92 TLSIMASGTLLIAFVPGYATIG----------------LAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR----- 150 (434)
T ss_pred HHHHHHHHHHHHHhCCcHHHHH----------------HHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc-----
Confidence 9999999999998862110000 0001246889999999999999988999999999999
Q ss_pred ccchhhhhhHHHHhhchhhhhhhhhhh--------ccccccchhHHHHHH
Q 007736 185 QMTNFFNWFFFFISIGSLAAVTVLVYI--------QDNLGREWGYGICAC 226 (591)
Q Consensus 185 ~r~~~~~~~~~~~~ig~~~~p~i~~~l--------~~~~g~~~~f~~~~~ 226 (591)
|+++.+++....++|..+++.+++.+ .+.+|||++|++.++
T Consensus 151 -rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 151 -KGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred -chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 99999998888888888887777665 246799999987544
No 62
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.88 E-value=2.4e-21 Score=209.50 Aligned_cols=177 Identities=11% Similarity=0.025 Sum_probs=135.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHH
Q 007736 35 AMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVT 114 (591)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~ 114 (591)
+..++...+...........+ +++++ .|++.++.+++.+.+.++..++.++.|+++||+ |||+++..+.++.+++.+
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~-p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~ 106 (438)
T TIGR00712 30 LGIFFGYAAYYLVRKNFALAM-PYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVML 106 (438)
T ss_pred HHHHHHHHHHHHHhccHHhhh-HHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHH
Confidence 333333333333333334344 45665 599999999999999999999999999999998 999999999888888887
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhH
Q 007736 115 ILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFF 194 (591)
Q Consensus 115 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 194 (591)
+++..... ..+...+.+.|++.|++.+...+.....+.|++|+++ |++++++++
T Consensus 107 ~~~~~~~~--------------------~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~~~ 160 (438)
T TIGR00712 107 LMGFVPWA--------------------TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSIWN 160 (438)
T ss_pred HHhccccc--------------------cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHHHH
Confidence 76654110 0356677888999999999988888899999999999 999999999
Q ss_pred HHHhhchhhhhhhhhhhc-cccccchhHHHHHHHHHHHHHHHHhcCC
Q 007736 195 FFISIGSLAAVTVLVYIQ-DNLGREWGYGICACAIVFGLVVFLSGTR 240 (591)
Q Consensus 195 ~~~~ig~~~~p~i~~~l~-~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 240 (591)
.+.++|+.++|.+.+.+. +..+|+..|++.++..++..+..++..+
T Consensus 161 ~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~ 207 (438)
T TIGR00712 161 CAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMR 207 (438)
T ss_pred HHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999988777544 4568999999877665554444444333
No 63
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.88 E-value=1.3e-21 Score=205.51 Aligned_cols=163 Identities=13% Similarity=0.095 Sum_probs=137.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 007736 43 CERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTII 122 (591)
Q Consensus 43 ~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~ 122 (591)
+...........+ +++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.+++.++++++
T Consensus 6 ~~~~~~~~~~~~~-~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~--- 80 (379)
T TIGR00881 6 AYYLVRKNFALAM-PYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFS--- 80 (379)
T ss_pred HHHHhHHhhhhhh-HHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHh---
Confidence 3333333434444 467788999999999999999999999999999999998 99999999999999999988876
Q ss_pred CCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchh
Q 007736 123 PSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSL 202 (591)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ 202 (591)
.+.+.+++.|++.|++.+...+...+++.|++|+++ |+++.++.+.+.++|..
T Consensus 81 ---------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~ 133 (379)
T TIGR00881 81 ---------------------TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------RGTWVSFWNCSHNVGGG 133 (379)
T ss_pred ---------------------hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------heeeEeehhccchhHHH
Confidence 478889999999999999999999999999999998 99999999999999999
Q ss_pred hhh-hhhhhhccccccchhHHHHHHHHHHHHHHHHh
Q 007736 203 AAV-TVLVYIQDNLGREWGYGICACAIVFGLVVFLS 237 (591)
Q Consensus 203 ~~p-~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 237 (591)
++| .+++.+.+..+|++.|++.++..++..+..+.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (379)
T TIGR00881 134 LLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFL 169 (379)
T ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhe
Confidence 999 56777777889999998877655444443333
No 64
>PRK11043 putative transporter; Provisional
Probab=99.88 E-value=2.4e-20 Score=199.07 Aligned_cols=146 Identities=12% Similarity=0.156 Sum_probs=128.4
Q ss_pred hhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 007736 59 LTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSC 138 (591)
Q Consensus 59 l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~ 138 (591)
+++++|.+..+.+++.+.+.++..+++++.|+++||+ |||+++..+.++..++.+++.++
T Consensus 32 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~------------------- 91 (401)
T PRK11043 32 IQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWV------------------- 91 (401)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHh-------------------
Confidence 5678999999999999999999999999999999998 99999999999888888888775
Q ss_pred cccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccccccc
Q 007736 139 IQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDNLGRE 218 (591)
Q Consensus 139 ~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~ 218 (591)
.+.+.+++.|+++|++.+...+...+++.|.+|+++ +++.++..+...++|..++|.+++++.+.+||+
T Consensus 92 -----~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~ 160 (401)
T PRK11043 92 -----ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------ANRVFATIMPLVALSPALAPLLGAWLLNHFGWQ 160 (401)
T ss_pred -----cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChH
Confidence 477888999999999988877777889999999888 888888888888899999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHH
Q 007736 219 WGYGICACAIVFGLVVF 235 (591)
Q Consensus 219 ~~f~~~~~~~~~~~~~~ 235 (591)
+.|++..+..++..+..
T Consensus 161 ~~~~~~~~~~~~~~~~~ 177 (401)
T PRK11043 161 AIFATLFAITLLLILPT 177 (401)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99988776555544433
No 65
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.87 E-value=4.2e-20 Score=196.64 Aligned_cols=172 Identities=14% Similarity=0.038 Sum_probs=143.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHH
Q 007736 34 AAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGV 113 (591)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 113 (591)
+.......+....+.....+.+|.+ .+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+.+.++.++.+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~lp~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~ 82 (392)
T PRK10473 5 LLCSFALVLLYPAGIDMYLVGLPRI-AADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIAS 82 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHH
Confidence 3344455555666666666666655 567999999999999999999999999999999998 99999999999999988
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhh
Q 007736 114 TILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWF 193 (591)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 193 (591)
+++..+ .+...+++.|+++|++.+...+...+++.|.+|+++ |+++.++.
T Consensus 83 ~~~~~~------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~ 132 (392)
T PRK10473 83 LLCSLA------------------------ETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR------RAKVLSLL 132 (392)
T ss_pred HHHHHh------------------------CcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH------HHHHHHHH
Confidence 888765 467778889999999999988889999999999998 99999999
Q ss_pred HHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHh
Q 007736 194 FFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLS 237 (591)
Q Consensus 194 ~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 237 (591)
+...++|..++|.+++.+.+..||++.|++.++..++..+....
T Consensus 133 ~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~ 176 (392)
T PRK10473 133 NGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLF 176 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888889999998887655554444333
No 66
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.87 E-value=1.7e-21 Score=200.73 Aligned_cols=184 Identities=16% Similarity=0.140 Sum_probs=162.6
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHH
Q 007736 26 SKTGGWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIF 105 (591)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~ 105 (591)
+.+..++...++++....+++.-|.+...+ .-.++.+|++++..|++.+.+.+.+.++.|++|+|+||| .||+++.+|
T Consensus 27 ~~~~~~~~l~il~~vnlmny~Dr~~iagv~-~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG 104 (493)
T KOG1330|consen 27 SMKSPTLTLVILCLVNLMNYADRYTIAGVL-KEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVG 104 (493)
T ss_pred ccccchHHHHHHHHHHHHHHhhhhhhhhhh-HHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeH
Confidence 344456677777888888888888766633 445788999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhc
Q 007736 106 ATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQ 185 (591)
Q Consensus 106 ~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 185 (591)
..++.++.+.++++ ..++.+.+.|.+.|+|.+...|..+++++|.||.++
T Consensus 105 ~~iW~~Av~~~~fs------------------------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~------ 154 (493)
T KOG1330|consen 105 IFIWTLAVFASGFS------------------------NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK------ 154 (493)
T ss_pred HHHHHHHHHHHHHH------------------------HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchh------
Confidence 99999999999998 689999999999999999999999999999999999
Q ss_pred cchhhhhhHHHHhhchhhhhhhhhhhccccc-cchhHHHHHHHHHHHHHHHHhcCCc
Q 007736 186 MTNFFNWFFFFISIGSLAAVTVLVYIQDNLG-REWGYGICACAIVFGLVVFLSGTRR 241 (591)
Q Consensus 186 r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~~ 241 (591)
|++.++++|+++.+|+++|.++++++.+..+ |||+|+..+++.++..++..++.++
T Consensus 155 Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~e 211 (493)
T KOG1330|consen 155 RSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVRE 211 (493)
T ss_pred hhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccC
Confidence 9999999999999999999999999998887 9999999887766665555555444
No 67
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.87 E-value=6.5e-20 Score=194.66 Aligned_cols=362 Identities=9% Similarity=-0.002 Sum_probs=226.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHH----HHHHHH
Q 007736 34 AAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIA----IFATVQ 109 (591)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~----~~~~~~ 109 (591)
.+.+.+..++...++-...+++|.|++ ++|+|..+++++.+.+.+...+++++.|.++||+ ||++... ++..+.
T Consensus 6 ~~~l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~ 83 (382)
T TIGR00902 6 FRWLALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIF 83 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHH
Confidence 344666677777777778899999985 6899999999999999999999999999999998 8854332 222111
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchh
Q 007736 110 AAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNF 189 (591)
Q Consensus 110 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 189 (591)
.+ .++..+ ++++.+++.|.+++.+.+...|...++..+. +++ |++.
T Consensus 84 ~~--~~~~~~------------------------~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~------~~~~ 129 (382)
T TIGR00902 84 AA--AFSAGA------------------------HNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQ------FGLD 129 (382)
T ss_pred HH--HHHHhh------------------------hhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHH------cCCC
Confidence 11 122222 4788888999999988888888877776543 344 8899
Q ss_pred hhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccC
Q 007736 190 FNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLD 269 (591)
Q Consensus 190 ~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (591)
++......++|..++|.+++++.+.+||+..|++..+..++..+ .+...++. ++++++.+
T Consensus 130 ~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~---------------- 189 (382)
T TIGR00902 130 YGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFMLI-GFLIKPTI---PPKDAIPE---------------- 189 (382)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHcCCCC---CCCccccc----------------
Confidence 99999999999999999999999999999998876554332222 22222110 11100000
Q ss_pred CCCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHH-HHHHHH
Q 007736 270 LPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRM-LPIWAT 348 (591)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 348 (591)
. +.... ..+ ....+.|+++.. ...++.
T Consensus 190 ----------------------~--~~~~~-----------------------~~~-----~~~l~~~~~~~~l~~~~l~ 217 (382)
T TIGR00902 190 ----------------------D--ESQGD-----------------------SAF-----IALLKNPMNLRFLAAVCLI 217 (382)
T ss_pred ----------------------c--ccccc-----------------------hhH-----HHHHcChHHHHHHHHHHHH
Confidence 0 00000 000 000111222222 112222
Q ss_pred HHHHHHHhccccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHH
Q 007736 349 TIIFWTVYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLV 428 (591)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~ 428 (591)
.......+...+.+. .. .+.+.. ..+.+.....+..++..+ +..|+.+| .++++.+.++.+
T Consensus 218 ~~~~~~~~~~~~~~l-~~-~g~s~~------~~g~l~~~~~~~~i~~~~----~~~~l~~r-------~g~~~~l~~~~~ 278 (382)
T TIGR00902 218 QGAHAAYYGFSAIYW-QA-AGISAS------ATGLLWGIGVLAEIIIFA----FSNKLFQN-------CSARDLLLISAI 278 (382)
T ss_pred HHHHHHHHHHHHHHH-HH-CCCCHh------HHHHHHHHHHHHHHHHHH----HhHHHHhh-------CCHHHHHHHHHH
Confidence 223333333222222 11 111111 111222222222233333 33334355 344566888999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHH-
Q 007736 429 LSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFL- 507 (591)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~- 507 (591)
+..+..+.+... .+.+.++...++.++.+++..+....++.+. |++.|++++|+++
T Consensus 279 ~~~~~~~~~~~~----------------------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~ 335 (382)
T TIGR00902 279 ACVGRWAIIGAI----------------------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNA 335 (382)
T ss_pred HHHHHHHHHHhH----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHH
Confidence 988888777653 2455566677999999999999999999988 9999999999987
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHH
Q 007736 508 STLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFV 560 (591)
Q Consensus 508 ~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~ 560 (591)
....+|..+++.++|++.+..+ . ..|++.+++++++.+
T Consensus 336 ~~~g~g~~~g~~~~G~l~~~~g--------------~-~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 336 LAMGGLIAIFTAFAGFIYPTLG--------------A-GTFVFMAIIAAAAFF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc--------------H-HHHHHHHHHHHHHHH
Confidence 4678999999999999986432 2 356667777766543
No 68
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.87 E-value=5.8e-20 Score=195.95 Aligned_cols=178 Identities=10% Similarity=-0.032 Sum_probs=133.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
|.+|......++...+...+.++++.|+++++|++..+.+++.+.+.++..++.++.|+++||+ |||+.+..+....++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLV 80 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4578888889999999999999999999999999999999999999999999999999999998 999999987766655
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
+..........+.. .......+.+.+++.+++.+...+....+..|.. ++ ++..++
T Consensus 81 ~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~------~~~~~g 136 (396)
T TIGR00882 81 LFAPFFIYVFGPLL----------------QSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RN------SNFEYG 136 (396)
T ss_pred HHHHHHHHHhhhHH----------------HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hh------cccccc
Confidence 44332211000000 0012334566778888888887777766665532 22 445667
Q ss_pred hhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHH
Q 007736 192 WFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVF 235 (591)
Q Consensus 192 ~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 235 (591)
......++|..++|.+++.+.+ .+|+..|++.++..++..+..
T Consensus 137 ~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~ 179 (396)
T TIGR00882 137 KARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLL 179 (396)
T ss_pred hhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHH
Confidence 7778889999999999998865 599999988876555544433
No 69
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.87 E-value=7.5e-20 Score=193.29 Aligned_cols=158 Identities=15% Similarity=0.136 Sum_probs=137.8
Q ss_pred HHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 007736 48 TLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRP 127 (591)
Q Consensus 48 ~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~ 127 (591)
.....+.+|.+.+ ++|++..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++.+++..++...
T Consensus 7 ~~~~~p~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~-------- 76 (377)
T PRK11102 7 IDMYLPALPVIAA-DFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALA-------- 76 (377)
T ss_pred HHHHhccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHH--------
Confidence 3444567777764 6899999999999999999999999999999998 99999999999999999888876
Q ss_pred CCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhh
Q 007736 128 PKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTV 207 (591)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i 207 (591)
.+.+.+.+.|++.|++.+...+...+++.|.+|+++ |++.+++.+...++|..++|.+
T Consensus 77 ----------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~ 134 (377)
T PRK11102 77 ----------------QTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE------FSRMMSFVTLVMTIAPLLAPII 134 (377)
T ss_pred ----------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 467788899999999999988899999999999998 9999999999999999999999
Q ss_pred hhhhccccccchhHHHHHHHHHHHHHHHHh
Q 007736 208 LVYIQDNLGREWGYGICACAIVFGLVVFLS 237 (591)
Q Consensus 208 ~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 237 (591)
++.+.+..+|++.|++.++..++..+....
T Consensus 135 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (377)
T PRK11102 135 GGWLLVWFSWHAIFWVLALAAILAAALVFF 164 (377)
T ss_pred HHHHHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 999999899999998877665555444333
No 70
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.86 E-value=6e-20 Score=188.11 Aligned_cols=389 Identities=15% Similarity=0.065 Sum_probs=266.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHH
Q 007736 29 GGWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATV 108 (591)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~ 108 (591)
.+.|+++ +-...+..++..|.+.+.+..++.+++|+|..|.+++.++..+.+.+..++.|.+.||+ |.|++..++.++
T Consensus 11 ~~~~~L~-~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~~l 88 (417)
T COG2223 11 IARRNLW-LSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSMLL 88 (417)
T ss_pred chhHHHH-HHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHHHH
Confidence 3455544 44455566677788888899999999999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccch
Q 007736 109 QAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTN 188 (591)
Q Consensus 109 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 188 (591)
..+-.+..+++...| +.+.+++.++++|++.+.+ ++..+.++.+||+++ +|.
T Consensus 89 ~~IP~~~~~~a~~~~---------------------~~~~ll~~gll~G~~GasF-av~m~~~s~~fP~~~------qG~ 140 (417)
T COG2223 89 LLIPCLGLAFAVTYP---------------------STWQLLVIGLLLGLAGASF-AVGMPNASFFFPKEK------QGL 140 (417)
T ss_pred HHHHHHHHHHHccCC---------------------chHHHHHHHHHHhccccee-hcccccccccCChhh------hhH
Confidence 999999999986543 5588999999999887665 677899999999999 999
Q ss_pred hhhhhHHHHhhchhhhhhhhhhhccccc---cchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhh
Q 007736 189 FFNWFFFFISIGSLAAVTVLVYIQDNLG---REWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRK 265 (591)
Q Consensus 189 ~~~~~~~~~~ig~~~~p~i~~~l~~~~g---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (591)
+.|++. ..|+|..+...+++.+....| |+....+..+..++..+.+++..+..++.++..++..+
T Consensus 141 AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~----------- 208 (417)
T COG2223 141 ALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP----------- 208 (417)
T ss_pred HHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch-----------
Confidence 999998 899999999999999998888 88888877777777666666654432221111110000
Q ss_pred cccCCCCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHHH
Q 007736 266 RHLDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPI 345 (591)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (591)
. ..+.+...++...+..+
T Consensus 209 --------------------------------~------------------------------~~~~v~~~~~~W~lsll 226 (417)
T COG2223 209 --------------------------------A------------------------------QLKAVFSNKDTWLLSLL 226 (417)
T ss_pred --------------------------------h------------------------------HHHHHhcCcchHHHHHH
Confidence 0 00011111222233333
Q ss_pred HHHHHHHHHHhccccc-eeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHH
Q 007736 346 WATTIIFWTVYAQMTT-FSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIG 424 (591)
Q Consensus 346 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~ 424 (591)
.......++.+..+.+ ++..++ ..+ ....+.......+...+..|+.+++.||++.+ +.+.
T Consensus 227 Y~~tFG~Fvgfs~~l~~~~~~~f-g~~------~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~-----------rv~~ 288 (417)
T COG2223 227 YFATFGGFVGFSAYLPMYLVTQF-GLS------PVTAGLIAFLFPLIGALARPLGGWLSDRIGGR-----------RVTL 288 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CCC------hhhHHHHHHHHHHHHHHHHhccchhhhhccch-----------hHHH
Confidence 3333333333333322 222221 111 22233455555566667778888888666655 5566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHH
Q 007736 425 VGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTG 504 (591)
Q Consensus 425 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g 504 (591)
+.+..++++....+.... .++ ...+....+..++..++..++..-..+-++...+|+ +-|.+.|
T Consensus 289 ~~f~~~~~~~~~l~~~~~-------~~~--------~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G 352 (417)
T COG2223 289 AVFVGMALAAALLSLFLT-------GFG--------HGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTG 352 (417)
T ss_pred HHHHHHHHHHHHHHcccc-------ccc--------cCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHH
Confidence 777777777666665310 000 112333334445555555666666677778887775 5688889
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 007736 505 LFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARW 568 (591)
Q Consensus 505 l~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~ 568 (591)
+......+|++.-|...+...+.++ .+...|+++..+++++.+..+....+
T Consensus 353 ~vga~G~lGGf~lp~~~g~~~~~tg-------------~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 353 IVGAIGGLGGFFLPLAFGVSLDLTG-------------SYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHHhccccccchhHHHHHHHHhcc-------------cHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999888876542 35567888999888888877776544
No 71
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.86 E-value=1.1e-19 Score=194.26 Aligned_cols=382 Identities=9% Similarity=-0.005 Sum_probs=230.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTG-TMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQA 110 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~ 110 (591)
|+++...+ .+...+..|.+.+.+...+.+ ++|++.+|.+++.+++.+++.++.++.|++.||+ |.|+++.++.++..
T Consensus 34 r~l~~s~~-~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~ 111 (462)
T PRK15034 34 RNLWISVS-CLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 55554444 455555555556666666554 7999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhh
Q 007736 111 AGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFF 190 (591)
Q Consensus 111 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 190 (591)
+..++++++...+ ..++..+++.|++.|++ +..++.....+++++|+++ |++++
T Consensus 112 i~~~~~~~a~~~~-------------------~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~------rG~A~ 165 (462)
T PRK15034 112 IPCVWLGIAVQNP-------------------NTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAK------QGSAL 165 (462)
T ss_pred HHHHHHHHHHccc-------------------CCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhH------hHHHH
Confidence 9888888752100 13788999999999998 6677889999999999999 99999
Q ss_pred hhhHHHHhhchhhhhhhhhhhc-----c-------------ccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChh
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQ-----D-------------NLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPL 252 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~-----~-------------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (591)
++.....++|..+++++++.+. . ..+|+.++++..+..++..+..++..++.+. ++...
T Consensus 166 Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~---~~~~~ 242 (462)
T PRK15034 166 GINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS---SRASI 242 (462)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc---cccCH
Confidence 9986666677766555544322 2 2235666555555544444444443322110 11110
Q ss_pred hHHHHHHHHHHhhcccCCCCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccch
Q 007736 253 TQIASVFVVAWRKRHLDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTD 332 (591)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (591)
++ ...++|
T Consensus 243 ~~----~~~vlk-------------------------------------------------------------------- 250 (462)
T PRK15034 243 AD----QLPVLQ-------------------------------------------------------------------- 250 (462)
T ss_pred HH----HHHHhC--------------------------------------------------------------------
Confidence 00 000110
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhc-cccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhc
Q 007736 333 VEEVKMVIRMLPIWATTIIFWTVYA-QMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVF 411 (591)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~ 411 (591)
+.+..+..+..++ ....+..+. +.+.+.... .+ .........+..+...+..|+.+++.||.+++
T Consensus 251 --~~~~Wllslly~~-tFG~fvg~s~~lp~~~~~~---~~------~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~-- 316 (462)
T PRK15034 251 --RLHLWLLSLLYLA-TFGSFIGFSAGFAMLAKTQ---FP------DVNILRLAFFGPFIGAIARSVGGAISDKFGGV-- 316 (462)
T ss_pred --CCchhHHHHHHHH-HHHHHHHHHHHHHHHHHHH---cC------hHHHHHHHHHHHHHHHHHHHhhHHHHHhcCch--
Confidence 0111111222222 222222222 222222111 11 00111112222344556667788777655544
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeec
Q 007736 412 KTPQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFL 491 (591)
Q Consensus 412 ~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~ 491 (591)
+.+.++.++++++...+..... .. ...+.+...+.++...++.++.....+-++.
T Consensus 317 ---------~vl~~~~i~~~i~~~~~~l~lp------~~----------~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip 371 (462)
T PRK15034 317 ---------RVTLINFIFMAIFSALLFLTLP------GT----------GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIA 371 (462)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHhc------cc----------cccHHHHHHHHHHHHHHHhcccchHHHHhhH
Confidence 4466666655555433322210 00 1123333344444444555555555565666
Q ss_pred ccCCc---------------------chhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHH
Q 007736 492 RECPK---------------------GMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWL 550 (591)
Q Consensus 492 ~~~p~---------------------~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~ 550 (591)
+.+|+ +..|.+.|+......+|+++-|.+.+...+.++ .+...|+.
T Consensus 372 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g-------------~~~~~~~~ 438 (462)
T PRK15034 372 VIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTG-------------SPVGAMKV 438 (462)
T ss_pred HHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcC-------------CcHHHHHH
Confidence 66663 156788888888899999999988888876543 24457888
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 007736 551 LAILSALNFVIYLAFARW 568 (591)
Q Consensus 551 ~~~~~~v~~~~~~~~~~~ 568 (591)
+.+..+++.++.|.+..|
T Consensus 439 ~~~~~~~~~~~~w~~y~r 456 (462)
T PRK15034 439 FLIFYIVCVLLTWLVYGR 456 (462)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 999999998888887654
No 72
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.86 E-value=8.6e-20 Score=196.89 Aligned_cols=356 Identities=13% Similarity=0.101 Sum_probs=220.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhh---chhHH-HHHHHHHHHHHHHHHH
Q 007736 41 EACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTF---LGRYL-TIAIFATVQAAGVTIL 116 (591)
Q Consensus 41 ~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~---~Grk~-~~~~~~~~~~i~~~l~ 116 (591)
.+..+.....+..+++.|+++.+|+++.+++.+.+...+...+..|+.|+++||. +|||| .++++....+++.+++
T Consensus 8 ~~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~ 87 (437)
T TIGR00792 8 DFGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLL 87 (437)
T ss_pred hHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHH
Confidence 4455666777788899999999999999999999999999999999999999983 37755 6667777888777777
Q ss_pred HHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCC-CCChhhhhccchhhhhhHH
Q 007736 117 TISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFD-DSDPQERNQMTNFFNWFFF 195 (591)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~-~~~~~~~~~r~~~~~~~~~ 195 (591)
... |... .......+++.+++.+++.+....+..++..|..+ +++ |++..++.+.
T Consensus 88 ~~~---~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~------R~~~~~~~~~ 143 (437)
T TIGR00792 88 FTT---PDFS---------------ATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRE------RESLSTFRRF 143 (437)
T ss_pred HhC---CCCC---------------cchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHH------HHHHHHHHHH
Confidence 654 2110 00235566777788888888887888889999874 455 9999999888
Q ss_pred HHhhchhhhhhhhhhhc-------cccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhccc
Q 007736 196 FISIGSLAAVTVLVYIQ-------DNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHL 268 (591)
Q Consensus 196 ~~~ig~~~~p~i~~~l~-------~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (591)
+.++|+.+++.+.+.+. +..+|++.+.+.++..++..+..+...++.+++.+.+++
T Consensus 144 ~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~----------------- 206 (437)
T TIGR00792 144 GATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIE----------------- 206 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcccc-----------------
Confidence 88888877766655443 245899888777765555444433333321110000000
Q ss_pred CCCCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHHHHHH
Q 007736 269 DLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPIWAT 348 (591)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (591)
.+ .+..+. + +...+.|.++..+....+
T Consensus 207 ---------------------------~~--~~~~~~-------------------~-----~~l~~~~~~~~~~~~~~~ 233 (437)
T TIGR00792 207 ---------------------------KK--LSLKQI-------------------F-----KALFKNDQLLILCLAYLF 233 (437)
T ss_pred ---------------------------cC--CCHHHH-------------------H-----HHHhCCHHHHHHHHHHHH
Confidence 00 000000 0 000011222222222111
Q ss_pred HHHHHHHhccccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHH
Q 007736 349 TIIFWTVYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLV 428 (591)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~ 428 (591)
....+........++.....+ +.. ..+.+.....+..++..++..++.+|+.+| +.+.++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~-----------~~~~~~~~ 295 (437)
T TIGR00792 234 YNLAFNIKNGVQVYYFTYVLG-DPE------LFSYMGSIAIVAGLIGVLLFPRLVKKFGRK-----------ILFAGGIL 295 (437)
T ss_pred HHHHHHHHcchhheeEeeecC-ChH------HHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----------HHHHHHHH
Confidence 111111222222333322111 100 112223333455555566666666444333 45677777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCC-------cchhHH
Q 007736 429 LSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECP-------KGMKTM 501 (591)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p-------~~~rg~ 501 (591)
+.+++++.+.+. +.+.+.+++..++.+++.+...+..++++.|.+| ++.+|.
T Consensus 296 ~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 354 (437)
T TIGR00792 296 LMVLGYLIFFFA---------------------GSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGL 354 (437)
T ss_pred HHHHHHHHHHHc---------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHH
Confidence 777776665542 1133344556677888888888888888888765 566899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 007736 502 STGLFLSTLSLGFFVSSLLVSLVHKVTG 529 (591)
Q Consensus 502 ~~gl~~~~~~lg~~lg~~l~~~i~~~~~ 529 (591)
++|++++...+|..+++.+.+++.+..|
T Consensus 355 ~~~~~~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 355 VYSVRTFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999987653
No 73
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.86 E-value=1.4e-19 Score=197.77 Aligned_cols=361 Identities=14% Similarity=0.115 Sum_probs=237.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
+++..+.....+.+++.+....-++-++. ++.-|+...+++.+...+-..+..+++|.++||+ .|||+++.+-++.++
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv~-~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~ 87 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLVT-QLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRAL 87 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHH
Confidence 45666777777777887776666666655 4567888999999999999999999999999998 999999999887776
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
..+.+++..... ..+.+.+++..++.|++.+...|+.++++.|.+|+++ ..++.+
T Consensus 88 ~~~~L~~l~~~~-------------------~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------L~~A~a 142 (524)
T PF05977_consen 88 VALLLAVLAFFG-------------------LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED------LPAANA 142 (524)
T ss_pred HHHHHHHHHHhC-------------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------HHHHHH
Confidence 665555432211 1477888888999999999999999999999999999 999999
Q ss_pred hhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccCCC
Q 007736 192 WFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLDLP 271 (591)
Q Consensus 192 ~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (591)
+.+...|+...+||.++|.+....|-.+.|.+.+++.++.++.+...+++.+ +++.+.+...+.+.
T Consensus 143 l~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~---~~~~~~e~~~~~l~----------- 208 (524)
T PF05977_consen 143 LNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPP---PSSLPRERFFSALR----------- 208 (524)
T ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc---ccccchhhhhhhHH-----------
Confidence 9999999999999999999998889888999988877666555444332211 11111011000000
Q ss_pred CCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHHHHHHHHH
Q 007736 272 SDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPIWATTII 351 (591)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (591)
++.++. ..+ ...+..+.. ..++...
T Consensus 209 --------------------------~G~ryv-------------------------~~~--~~l~~~l~~--~~~~~l~ 233 (524)
T PF05977_consen 209 --------------------------EGLRYV-------------------------RSS--PPLRSVLLR--SFLFNLF 233 (524)
T ss_pred --------------------------HHHHHH-------------------------hcc--hHHHHHHHH--HHHHHHh
Confidence 001110 000 011111111 1111111
Q ss_pred HHHHhccccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHH
Q 007736 352 FWTVYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSI 431 (591)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~ 431 (591)
.......+ ..+.....+.+ ...-+.+.+...++.++++.+.. ++.+| .+..+.+..+.++.+
T Consensus 234 ~~a~~aLl-Pl~a~~~l~~~------a~~yGll~a~~gvGai~Gal~~~----~l~~~-------~~~~~lv~~~~~~~a 295 (524)
T PF05977_consen 234 ASAVWALL-PLFARDVLGGG------ASGYGLLLAAFGVGAILGALLLP----RLRRR-------LSSRRLVLLASLLFA 295 (524)
T ss_pred hhHHHHhh-hHHHHHHhCCc------HHHHHHHHHHHHHHHHHHHHHHH----Hhhcc-------cCcchhhHHHHHHHH
Confidence 11111111 11111111111 00112233333344444433333 22233 233345667777777
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHH
Q 007736 432 FAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLS 511 (591)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~ 511 (591)
++++.+++. .+.+..++.+++.|++........++.+++..|+++||++++++++...
T Consensus 296 ~~~~~lal~----------------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~ 353 (524)
T PF05977_consen 296 LALLLLALS----------------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFF 353 (524)
T ss_pred HHHHHHhcc----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHH
Confidence 777776653 2455566778888999999988889999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccc
Q 007736 512 LGFFVSSLLVSLVHKVT 528 (591)
Q Consensus 512 lg~~lg~~l~~~i~~~~ 528 (591)
.+..+|.++.|.+.+..
T Consensus 354 g~~~lGsll~G~la~~~ 370 (524)
T PF05977_consen 354 GGMPLGSLLWGFLADHF 370 (524)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999997644
No 74
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.86 E-value=2.5e-20 Score=205.57 Aligned_cols=401 Identities=13% Similarity=0.067 Sum_probs=233.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHH
Q 007736 69 SAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVV 148 (591)
Q Consensus 69 ~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (591)
+.+++.+...++..+++++.|+++|++ |||++++++.+++.+|.++++++ ++...
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a------------------------~~~~~ 144 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALA------------------------PSWYQ 144 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHh------------------------hhHHH
Confidence 458999999999999999999999998 99999999999999999999998 69999
Q ss_pred HHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccc--cccchhHHHHHH
Q 007736 149 LYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDN--LGREWGYGICAC 226 (591)
Q Consensus 149 ~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~--~g~~~~f~~~~~ 226 (591)
+.++|++.|+|.|+.....+.+++|..|++. |+...+..+....+|..++. +.+...++ ++||..+.+..+
T Consensus 145 l~~GR~l~G~g~G~~~~~~piy~sEiap~~~------RG~l~~~~~l~~~~Gi~~~~-~~~~~~~~~~~~Wr~~~~~~~i 217 (513)
T KOG0254|consen 145 LIVGRILTGLGVGGASVLAPVYISEIAPAHI------RGTLVSLYQLFITIGILLGY-CINYGTSKVYAGWRIPLGLALI 217 (513)
T ss_pred HHHHHHHhccchhhhhhcchhhHhhcCChhh------hHHHHHHHHHHHHHHHHHHH-HHhhhhccCCccHHHHHHHHHH
Confidence 9999999999999999999999999999999 99999999999999999984 45555444 489988887776
Q ss_pred HHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccCCCCCCCCcccccCCccccccccccCCCCcchhhhHHh
Q 007736 227 AIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKA 306 (591)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (591)
..++..+. ....++.+..--+........+.+....... .+ +.....+..
T Consensus 218 ~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~----~~-------------------------~~~~~~~~~ 267 (513)
T KOG0254|consen 218 PAVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLS----PE-------------------------DVEVELELL 267 (513)
T ss_pred HHHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCCC----Cc-------------------------chHHHHHHH
Confidence 65555444 3333321111000111111111111111100 00 000000000
Q ss_pred h--hccCCCCCccccccccccccCccchhHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeccccccccccccccccc
Q 007736 307 A--IFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPIWATTIIFWTVYAQMTTFSVSQATTMNRHIGSFEIPGASL 384 (591)
Q Consensus 307 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 384 (591)
. ...+... .+ .+..|....+ ....|+......+..+... ........+...-.+.. +...+....
T Consensus 268 ~~~~~~~~~~-~~---~~~~~~~l~~--~~~~~~~~i~~~l~~fqq~-----tG~~~~~~Y~~~if~~~--g~~~~~~~~ 334 (513)
T KOG0254|consen 268 KIKLLVEAEV-AE---GKASWGELFS--PKVRKRLIIGLLLQLFQQL-----TGINYVFYYSTTIFKSA--GLKSDTFLA 334 (513)
T ss_pred HHHHHHhhhc-cc---ccccHHHhcC--cchHHHHHHHHHHHHHHHH-----hCCceEEeehHHHHHhc--CCCCchHHH
Confidence 0 0000000 00 0001111111 0122222222222111111 11111111111001110 111111112
Q ss_pred cccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccch
Q 007736 385 TFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLS 464 (591)
Q Consensus 385 ~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 464 (591)
.....+...+...+...+++|++|| ..++.|...+.+++++++.......... + . ....
T Consensus 335 ~~~~~~v~~~~t~~~~~lvd~~gRr-----------~lll~s~~~m~~~~~~~~~~~~~~~~~~---~-----~--~~~~ 393 (513)
T KOG0254|consen 335 SIILGVVNFLGTLVATYLVDRFGRR-----------KLLLFGAAGMSICLVILAVVGVFALYYP---N-----S--SKGA 393 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccH-----------HHHHHhHHHHHHHHHHHHHHHHHhccCC---C-----c--ccch
Confidence 2222222333333445666666555 5688899999999998887642110000 0 0 0111
Q ss_pred hhHHHHHHHHHHHH-HHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcc
Q 007736 465 VFWLVPQFFLVGAG-EAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGR 543 (591)
Q Consensus 465 ~~~li~~~~l~g~g-~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~ 543 (591)
.++.++..++.-.. .....|..+.+..|.+|.+.|+.+.++....+++.+++-...........+
T Consensus 394 ~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~-------------- 459 (513)
T KOG0254|consen 394 GWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALG-------------- 459 (513)
T ss_pred hHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc--------------
Confidence 22222222333222 223346667788999999999999999999998888887777666653210
Q ss_pred hHHHHHHHHHHHHHHHH-HHHHHhhhccccccccccc
Q 007736 544 LYDFYWLLAILSALNFV-IYLAFARWYVYKDKRLAEE 579 (591)
Q Consensus 544 ~~~~f~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~~~ 579 (591)
....|..+++.+.+... +.+++.+++|+++.++.++
T Consensus 460 ~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~ 496 (513)
T KOG0254|consen 460 IGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINE 496 (513)
T ss_pred ccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHH
Confidence 11356667777777777 7888999999999987764
No 75
>PRK10133 L-fucose transporter; Provisional
Probab=99.86 E-value=2.3e-19 Score=193.77 Aligned_cols=153 Identities=17% Similarity=0.119 Sum_probs=125.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHH
Q 007736 30 GWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQ 109 (591)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~ 109 (591)
....++.+.++.+...+........+|.+ ++++|+++.+.+++.+.+.+++.+++++.|+++||+ |||+++.++..++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~~ 101 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLY 101 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHH
Confidence 34455666666666666666666666654 889999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchh
Q 007736 110 AAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNF 189 (591)
Q Consensus 110 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 189 (591)
+++.+++...... .++..++++|+++|+|.+...+..++++.|..|+++ |...
T Consensus 102 ~~~~~l~~~~~~a---------------------~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~------~~~~ 154 (438)
T PRK10133 102 ALGAALFWPAAEI---------------------MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS------GHFR 154 (438)
T ss_pred HHHHHHHHHHHhc---------------------CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh------HHHH
Confidence 9999876422110 478889999999999999999999999998766665 6667
Q ss_pred hhhhHHHHhhchhhhhhhhhhh
Q 007736 190 FNWFFFFISIGSLAAVTVLVYI 211 (591)
Q Consensus 190 ~~~~~~~~~ig~~~~p~i~~~l 211 (591)
.++.+....+|..++|.+++.+
T Consensus 155 ~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 155 LNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888889999999887654
No 76
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.86 E-value=3.1e-20 Score=195.14 Aligned_cols=159 Identities=17% Similarity=0.126 Sum_probs=136.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAG 112 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 112 (591)
+++...+..++.....+...+++|.++++++|++..+.+++.+.+.+++.++.++.|+++||+ |||+++.++.++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~ 80 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIP 80 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHH
Confidence 456677777777888888888888889999999999999999999999999999999999998 9999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCcccccchh-HHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 113 VTILTISTIIPSLRPPKCNLNHGQSCIQASGM-QLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
.++++++ . +.+.+++.|+++|++.+. .+...++++|++|+++ |+++.+
T Consensus 81 ~~~~~~~------------------------~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~------r~~~~~ 129 (366)
T TIGR00886 81 CLWAGLA------------------------VQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKI------QGTALG 129 (366)
T ss_pred HHHHHHH------------------------hhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhh------hhHHHH
Confidence 9888876 4 778888999999998665 4567889999999998 999999
Q ss_pred hhHHHHhhchhhhhhhhhhhcc----------ccccchhHHH
Q 007736 192 WFFFFISIGSLAAVTVLVYIQD----------NLGREWGYGI 223 (591)
Q Consensus 192 ~~~~~~~ig~~~~p~i~~~l~~----------~~g~~~~f~~ 223 (591)
++....++|..+++.+++.+.. ..+|++.|++
T Consensus 130 ~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~ 171 (366)
T TIGR00886 130 LAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVI 171 (366)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHH
Confidence 9887788888888777766543 3489999844
No 77
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.85 E-value=1.1e-20 Score=203.08 Aligned_cols=377 Identities=12% Similarity=0.138 Sum_probs=243.4
Q ss_pred hcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccccc
Q 007736 62 TMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQA 141 (591)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (591)
.++++..+-+++.+.++.++.++.+++|+++||+ |-|+++.++.++.++++++...+..
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~-------------------- 125 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAAS-------------------- 125 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 5788999999999999999999999999999998 9999999999999999999988854
Q ss_pred chhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccc-cccchh
Q 007736 142 SGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDN-LGREWG 220 (591)
Q Consensus 142 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~-~g~~~~ 220 (591)
.+...+++.|+++|++.|...|+...+.+.+.|++| |++..++...+..+|.+++.+++|++.+. .||+.+
T Consensus 126 --~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~si 197 (466)
T KOG2532|consen 126 --IGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE------RSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSI 197 (466)
T ss_pred --hcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchH
Confidence 344577999999999999999999999999999999 99999999999999999999999999998 899999
Q ss_pred HHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccCCCCCCCCcccccCCccccccccccCCCCcch
Q 007736 221 YGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQF 300 (591)
Q Consensus 221 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (591)
|++.+.+.++..++++....+.+.+.+.-+..+ .
T Consensus 198 fY~~g~~g~i~~~~w~~~~~d~P~~h~~is~~E----------------------------------------------l 231 (466)
T KOG2532|consen 198 FYVFGIVGLIWFILWFLFYSDSPSKHPNISEKE----------------------------------------------L 231 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccCCCCCHHH----------------------------------------------H
Confidence 999887666555554444333222211111000 0
Q ss_pred hhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeccccccccccccc
Q 007736 301 RFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPIWATTIIFWTVYAQMTTFSVSQATTMNRHIGSFEIP 380 (591)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 380 (591)
+.+.......+. ++..+.||+... ++...+...+..+.....+++..++.++++... .+.+.. .
T Consensus 232 ~~I~~~k~~~~~-----~~~~~vP~~~i~----ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~V-L~f~v~------~ 295 (466)
T KOG2532|consen 232 KYIEKGKSEAHV-----KKKPPVPYKAIL----TSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEV-LGFDVR------E 295 (466)
T ss_pred HHHHhccccccc-----CCCCCCCHHHHH----cCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH-hCCChh------h
Confidence 000000000000 000234553111 111112222333444455556666666655432 122211 2
Q ss_pred cccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHH--HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 007736 381 GASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRI--GVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPT 458 (591)
Q Consensus 381 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i--~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 458 (591)
.+.+.++..+..++...+.+.+.|++.+| ... ....+++ .++....+++++.+++.. ++
T Consensus 296 ~G~~salP~l~~~~~k~~~g~lsD~l~~~-~ls---~t~~rkifn~i~~~~~ai~l~~l~~~~--------------~~- 356 (466)
T KOG2532|consen 296 TGFLSALPFLAMAIVKFVAGQLSDRLTFR-ILS---ETTVRKIFNTIAFGGPAVFLLVLAFTS--------------DE- 356 (466)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCc---hHhHHHHHHhHHHHHHHHHHHeeeecC--------------CC-
Confidence 35556666667777777777778777665 211 2233334 345555555555555431 11
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHh-hhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcccc
Q 007736 459 AEIPLSVFWLVPQFFLVGAGEAFTY-IGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLAD 537 (591)
Q Consensus 459 ~~~~~~~~~li~~~~l~g~g~~~~~-~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~ 537 (591)
+.+. .+.....+.+..... +..+.-..+.+ +++.+..+|+.++...++++++|.+++.+.. .+....|
T Consensus 357 -----~~~~-a~~~l~~~~~~~g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~-~~t~~eW--- 425 (466)
T KOG2532|consen 357 -----HRLL-AVILLTIAIGLSGFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGIIVT-DNTREEW--- 425 (466)
T ss_pred -----cchH-HHHHHHHHHHHcccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheeeEeC-CCCHHHH---
Confidence 1111 111222222222222 33222223335 4778999999999999999999999998873 1111223
Q ss_pred ccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 007736 538 NLNQGRLYDFYWLLAILSALNFVIYLAFA 566 (591)
Q Consensus 538 ~~~~~~~~~~f~~~~~~~~v~~~~~~~~~ 566 (591)
...|++.+++.+++.+++.++.
T Consensus 426 -------~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 426 -------RIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred -------HHHHHHHHHHHHHhchheeEee
Confidence 4678888999999887777765
No 78
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.84 E-value=3.8e-19 Score=214.60 Aligned_cols=156 Identities=13% Similarity=0.157 Sum_probs=126.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCh--HHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGN--ASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATV 108 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~ 108 (591)
.+.+...++..++.++...+....+..++...++.+. ...+++.+++.++..++++++|+++||+ |||++++++.++
T Consensus 8 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~ 86 (1146)
T PRK08633 8 IIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLF 86 (1146)
T ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHH
Confidence 3455666666777666666666666666666666544 4468889999999999999999999998 999999998877
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccch
Q 007736 109 QAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTN 188 (591)
Q Consensus 109 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 188 (591)
.++..++..+.... .+++.+++.|+++|++.+...+...++++|++|+++ |++
T Consensus 87 ~~~~~~~~~~~~~~---------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~ 139 (1146)
T PRK08633 87 EVGLTLLIVLAYYL---------------------GWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN------LSR 139 (1146)
T ss_pred HHHHHHHHHHHHHH---------------------ccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc------chh
Confidence 66666554443211 367889999999999999999999999999999999 999
Q ss_pred hhhhhHHHHhhchhhhhhhhhhhccc
Q 007736 189 FFNWFFFFISIGSLAAVTVLVYIQDN 214 (591)
Q Consensus 189 ~~~~~~~~~~ig~~~~p~i~~~l~~~ 214 (591)
++++...+.++|.++||.+++++.+.
T Consensus 140 ~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 140 ANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998765
No 79
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.84 E-value=1.6e-18 Score=189.89 Aligned_cols=175 Identities=13% Similarity=0.105 Sum_probs=139.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhh----chhHHH-HHH
Q 007736 30 GWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTF----LGRYLT-IAI 104 (591)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~----~Grk~~-~~~ 104 (591)
.+|+.+.++...+......+.....+|.++++ .|.+.++++... ..... .++.++.|.++||+ +||||. +.+
T Consensus 10 ~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~~-~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll~ 86 (491)
T PRK11010 10 QQPNSAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFFS-LVGQA-YVFKFLWSPLMDRYTPPFLGRRRGWLLA 86 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHH-HHHHH-HHHHHHHHHHHHcccccCCCCchHHHHH
Confidence 45567778888888888888888899999875 599999999863 22222 26899999999994 288885 556
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhh
Q 007736 105 FATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERN 184 (591)
Q Consensus 105 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 184 (591)
+.+..+++...+++.. | ..+++.+.+.+++.+++.+...+...++..|++|+++
T Consensus 87 ~~i~~~~~~~~~a~~~--~-------------------~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~----- 140 (491)
T PRK11010 87 TQLLLLVAIAAMGFLE--P-------------------GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE----- 140 (491)
T ss_pred HHHHHHHHHHHHHHcC--C-------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh-----
Confidence 6667777777776642 1 1367788888999999999888999999999999998
Q ss_pred ccchhhhhhHHHHhhchhhhhhhhhhhcc-ccccchhHHHHHHHHHHHHHH
Q 007736 185 QMTNFFNWFFFFISIGSLAAVTVLVYIQD-NLGREWGYGICACAIVFGLVV 234 (591)
Q Consensus 185 ~r~~~~~~~~~~~~ig~~~~p~i~~~l~~-~~g~~~~f~~~~~~~~~~~~~ 234 (591)
|+++.++...+.++|..+++.+++++.+ ..|||..|++.++..++..+.
T Consensus 141 -rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~ 190 (491)
T PRK11010 141 -RGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIA 190 (491)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988 569999999887665555443
No 80
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.84 E-value=2e-18 Score=185.56 Aligned_cols=386 Identities=15% Similarity=0.073 Sum_probs=221.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchh-HHHHHHHHHHHHHHHHH
Q 007736 37 ILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGR-YLTIAIFATVQAAGVTI 115 (591)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Gr-k~~~~~~~~~~~i~~~l 115 (591)
+.+..++...++-...++++.|+++++|++..+.|++.+.+.++..+++++.|+++||+ || |+++.++.++..++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~~~~ 85 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALLLFF 85 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHH
Confidence 55666777777777789999999999999999999999999999999999999999997 65 77888877777777766
Q ss_pred HHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhcccccccccccccc--------CCCCCCChhhhhccc
Q 007736 116 LTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGS--------DQFDDSDPQERNQMT 187 (591)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~--------~~~~~~~~~~~~~r~ 187 (591)
..+. .+++.+++.|++.+++.+...+...+... |...... |.
T Consensus 86 ~~~~------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~------~~ 135 (418)
T TIGR00889 86 AAQV------------------------TTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFP------PI 135 (418)
T ss_pred HHHh------------------------cCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCC------Ce
Confidence 6654 36777788888888877666555544322 2222222 55
Q ss_pred hhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcc
Q 007736 188 NFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRH 267 (591)
Q Consensus 188 ~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (591)
+.+| .+|.+++|.+++.+.....|. +|++.++..++..+. .+..++.+.++++++. +.
T Consensus 136 r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~--~~------------ 193 (418)
T TIGR00889 136 RVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVF-ALTLPDIPVAKSTAKM--SI------------ 193 (418)
T ss_pred eeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHH-HhcCCCCCCCcccccc--CH------------
Confidence 5544 368888898888774433354 455554444433332 2333332110000000 00
Q ss_pred cCCCCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHH-HHHH
Q 007736 268 LDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRM-LPIW 346 (591)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 346 (591)
.+..+ .+..... ++ +++... ...+
T Consensus 194 -----------------------------~~~~~-~~~~~~~------------------------k~-~~~~~~~~~~~ 218 (418)
T TIGR00889 194 -----------------------------KVMLG-LDAFILF------------------------KN-KRMAIFFFFSM 218 (418)
T ss_pred -----------------------------HHHhh-hhHHHHh------------------------cC-CCeeeHHHHHH
Confidence 00000 0000000 00 001011 1111
Q ss_pred HHHHHHHHHhccccceeeeeecccccccc-cccc-ccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHH
Q 007736 347 ATTIIFWTVYAQMTTFSVSQATTMNRHIG-SFEI-PGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIG 424 (591)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~ 424 (591)
+........+...+.+.... +.+...+ ++.. ..+...++..+..+++..+.+++.+|+.+| +.+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r-----------~~l~ 285 (418)
T TIGR00889 219 LLGAPLQITNIFGNGFLHEF--GRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK-----------KVML 285 (418)
T ss_pred HHHhHHHHHHHhHHHHHHHh--cccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----------HHHH
Confidence 11111111111111111100 0000000 0000 012223333334444445555555444333 5577
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHH
Q 007736 425 VGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTG 504 (591)
Q Consensus 425 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g 504 (591)
++.++.+++++++..... .....+.+++..++.+++++...+....++.+.+|++.|++++|
T Consensus 286 ~~~~~~~v~~~l~~~~~~------------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g 347 (418)
T TIGR00889 286 LSLVAWALRFGFFAYGDP------------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQG 347 (418)
T ss_pred HHHHHHHHHHHHHHHcCc------------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 788877777666654210 01123444556788889988888888889999999999999999
Q ss_pred HHH-HHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHHHhhhc
Q 007736 505 LFL-STLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWY 569 (591)
Q Consensus 505 l~~-~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~ 569 (591)
+.+ ....+|..+|+.+.|++.+..++... .+++..|.+.+++++++.+..+++.++.
T Consensus 348 ~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~--------~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 348 LFTLMCNGFGSLLGYILSGVMVEKMFAYGT--------FDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhccccC--------CchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 997 56789999999999999865320000 0134567777777777777777776644
No 81
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.83 E-value=4.6e-19 Score=213.72 Aligned_cols=144 Identities=15% Similarity=0.107 Sum_probs=111.7
Q ss_pred HhhhhcCCCh-HHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHH--HHHHHHHHHHHhhcCCCCCCCCCCCC
Q 007736 58 YLTGTMHLGN-ASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATV--QAAGVTILTISTIIPSLRPPKCNLNH 134 (591)
Q Consensus 58 yl~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~--~~i~~~l~~~~~~~~~~~~~~~~~~~ 134 (591)
.+.+..+.+. ...++..+.+.+.+.++++++|+++||+ |||+++.....+ ......+.++..
T Consensus 41 ~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~~-------------- 105 (1140)
T PRK06814 41 GLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFHL-------------- 105 (1140)
T ss_pred HhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHHH--------------
Confidence 3444444433 3567788889999999999999999998 999986442222 222222222111
Q ss_pred CCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccc
Q 007736 135 GQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDN 214 (591)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~ 214 (591)
.+++.++++|+++|++.+...|...+++.|++|+++ |++++++.+++.++|.++||.++|++.+.
T Consensus 106 ---------~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------~~~a~~~~~~~~~ig~~igp~l~g~l~~~ 170 (1140)
T PRK06814 106 ---------NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDE------LLGANALVEAGTFIAILLGTIIGGLATIS 170 (1140)
T ss_pred ---------hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccc------cchhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 478899999999999999999999999999999999 99999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHH
Q 007736 215 LGREWGYGICACAIVFG 231 (591)
Q Consensus 215 ~g~~~~f~~~~~~~~~~ 231 (591)
.||++.|+...+..+++
T Consensus 171 ~~~~~~~~~~~~~~~~~ 187 (1140)
T PRK06814 171 GNFVILVALLMGIAVLG 187 (1140)
T ss_pred cccHHHHHHHHHHHHHH
Confidence 99998884444433333
No 82
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.83 E-value=1.3e-18 Score=184.58 Aligned_cols=339 Identities=10% Similarity=0.013 Sum_probs=204.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhH----HHHHHHHHHHHHHHHH
Q 007736 40 GEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRY----LTIAIFATVQAAGVTI 115 (591)
Q Consensus 40 ~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk----~~~~~~~~~~~i~~~l 115 (591)
..++...+.....+++|.|++ ++|.|..+++++.+.+.+...++.++.|.++||+ ||+ +.+.+...+. ....
T Consensus 12 ~~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~--~~~~ 87 (382)
T PRK11128 12 SYFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLF--AVAF 87 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHH--HHHH
Confidence 355556677778889999995 5899999999999999999999999999999998 984 3332222111 1111
Q ss_pred HHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHH
Q 007736 116 LTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFF 195 (591)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 195 (591)
.... ++.+.+++.|++.+++.+...+...++..++ +++ |++.++..+.
T Consensus 88 ~~~~------------------------~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~------~~~a~~~~~~ 135 (382)
T PRK11128 88 WFGA------------------------HSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQ------IGLDYGKVRL 135 (382)
T ss_pred HHhc------------------------ccHHHHHHHHHHHHHHHcccccHHHHHHHHH--Hhh------ccCCcchHHH
Confidence 1111 4788888899999999888888877777765 344 7888888888
Q ss_pred HHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccCCCCCCC
Q 007736 196 FISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLDLPSDPS 275 (591)
Q Consensus 196 ~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (591)
..++|..+||.+++++.+++||+..|++.++..++..+.. ...++ +++++++.+
T Consensus 136 ~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~---------------------- 189 (382)
T PRK11128 136 WGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQ-LLRPT---IMPQGESRQ---------------------- 189 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHH-HccCC---CCCcccccc----------------------
Confidence 8899999999999999999999999987765444333322 22221 111110000
Q ss_pred CcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHH-HHHHHHHHHH
Q 007736 276 MFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLP-IWATTIIFWT 354 (591)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 354 (591)
+..+ ....+ .+..+.|.++.... .++.......
T Consensus 190 -------------------~~~~----------------------~~~~~-----~~i~~~~~~~~~~~~~~l~~~~~~~ 223 (382)
T PRK11128 190 -------------------QESA----------------------GWPAW-----KALLKEPTVWRFLLCVSLLQGSHAA 223 (382)
T ss_pred -------------------cccc----------------------ccchH-----HHHHcChhHHHHHHHHHHHHHHhHh
Confidence 0000 00000 00011122222111 1111222222
Q ss_pred HhccccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHHHH
Q 007736 355 VYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIFAM 434 (591)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~~~ 434 (591)
.+...+.+. .+ .+.+.. ..+.......+..+....+.+++. +| .++.+.+..+.++.++++
T Consensus 224 ~~~~~~~~~-~~-~g~s~~------~~g~~~~~~~~~~~~~~~~~g~l~----~r-------~~~~~~l~~~~~~~~~~~ 284 (382)
T PRK11128 224 YYGFSAIYW-QA-AGYSAS------TIGYLWSLGVVAEVLIFAFSNRLF----RR-------WSARDLLLLSAICGVVRW 284 (382)
T ss_pred HHHHHHHHH-HH-CCCCHh------HHHHHHHHHHHHHHHHHHHHHHHH----HH-------CCHHHHHHHHHHHHHHHH
Confidence 222222211 11 111110 112222222333333333444443 44 233355777787777776
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHH-HHHHHH
Q 007736 435 VAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFL-STLSLG 513 (591)
Q Consensus 435 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~-~~~~lg 513 (591)
+.+... .+.+.+++..++.++++++..+....+..+. +++.+++.+++++ ....+|
T Consensus 285 ~~~~~~----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g 341 (382)
T PRK11128 285 GLMGST----------------------TALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGS 341 (382)
T ss_pred HHHHhh----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHH
Confidence 666543 2445556677888999998888888888886 4555788999887 556778
Q ss_pred HHHHHHHHHHhhccc
Q 007736 514 FFVSSLLVSLVHKVT 528 (591)
Q Consensus 514 ~~lg~~l~~~i~~~~ 528 (591)
..+|+.+.|.+.+..
T Consensus 342 ~~ig~~i~G~l~~~~ 356 (382)
T PRK11128 342 IAIMTVLSGFLYQHL 356 (382)
T ss_pred HHHHHHHHHHHHHhc
Confidence 899999999998643
No 83
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.83 E-value=4.1e-19 Score=187.61 Aligned_cols=164 Identities=13% Similarity=0.121 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHHHhhhhcC--CChHHHHHHHHH-----HHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHH
Q 007736 45 RLTTLGIAVNLVTYLTGTMH--LGNASAANTVTN-----FLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILT 117 (591)
Q Consensus 45 ~~~~~~~~~~l~~yl~~~~~--~~~~~~~~~~~~-----~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~ 117 (591)
.+..+.+.. +..++.++.. .+.++.+.+.+. ..+...+++++.|+++||+ |||+++.++.++..++.++++
T Consensus 6 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~ 83 (394)
T TIGR00883 6 WFDFYLYGF-AAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIG 83 (394)
T ss_pred HHHHHHHHH-HHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHh
Confidence 344444343 4444444432 445555554433 2233456889999999998 999999999999999998888
Q ss_pred HHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHH
Q 007736 118 ISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFI 197 (591)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 197 (591)
++.+.+. ........+++.|+++|++.+...+...++++|.+|+++ |++..++.+.+.
T Consensus 84 ~~~~~~~----------------~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~ 141 (394)
T TIGR00883 84 LLPSYAT----------------IGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK------RGFYGSFQQVGA 141 (394)
T ss_pred hCCChhh----------------hHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc------chHHHHHHHHHH
Confidence 7622110 000112357889999999999999999999999999998 999999999999
Q ss_pred hhchhhhhhhhhhhc--------cccccchhHHHHHHHHHHHH
Q 007736 198 SIGSLAAVTVLVYIQ--------DNLGREWGYGICACAIVFGL 232 (591)
Q Consensus 198 ~ig~~~~p~i~~~l~--------~~~g~~~~f~~~~~~~~~~~ 232 (591)
.+|..+++.+++.+. +.++|++.|++.++..+++.
T Consensus 142 ~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 184 (394)
T TIGR00883 142 PVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGL 184 (394)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHH
Confidence 999999988776553 35689999887766544443
No 84
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.83 E-value=4.7e-21 Score=202.71 Aligned_cols=365 Identities=38% Similarity=0.618 Sum_probs=235.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCC
Q 007736 99 YLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDS 178 (591)
Q Consensus 99 k~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 178 (591)
.|++.++.+++.+|.++++++...+.+ ..+.+...++++.++.++|.|+..|+..++.+|+++++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~~---------------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~ 65 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPSL---------------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDED 65 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSSC---------------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTT
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcchh---------------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhccc
Confidence 378999999999999998887653321 11235678899999999999999999999999999987
Q ss_pred ChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeec-cCCCChhhH-HH
Q 007736 179 DPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFK-KLVGSPLTQ-IA 256 (591)
Q Consensus 179 ~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~ 256 (591)
+. .+|.+++++++++.|+|+.+++.+.+++.+++||.+.|.++.+..+++++.++...++++.+ ++.+.+..+ ..
T Consensus 66 ~~---~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~ 142 (372)
T PF00854_consen 66 DD---SRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIK 142 (372)
T ss_dssp TT---THHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SH
T ss_pred ch---hhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHH
Confidence 31 23999999999999999999999999999999999999999999999999999988887766 555666555 34
Q ss_pred HHHHHHHhhcccCCCCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCcccccccccccc-CccchhHH
Q 007736 257 SVFVVAWRKRHLDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNL-ATLTDVEE 335 (591)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 335 (591)
.++..+.+++....+....+.....+ ..+....... ...........+ ....|.. ....+++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 206 (372)
T PF00854_consen 143 LVLVAAFKKRKLAVPKGSSWLDWALF-----QYSERSIFGI--IVFIRAAVIFFP---------EIFFWALFCQVQRVEE 206 (372)
T ss_dssp HHHHHHHHHHCCCH-HHHHHHHHHHH-----HHCCCCCCCC--CCHHHHHHHHCC---------CHHHHTTTSSTTTHHH
T ss_pred HHHHHHHHHhhcccccchHHHHHhhh-----hhhhhhhhhh--hhhccchhhhhh---------hhhhcccCCccceeee
Confidence 44455555544433321111111000 0000000000 000000000000 0111111 12334456
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccceeeeeeccccccccc-cccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCC
Q 007736 336 VKMVIRMLPIWATTIIFWTVYAQMTTFSVSQATTMNRHIGS-FEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTP 414 (591)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~ 414 (591)
.+.+.+.+..+.+.+.++....+.+.+...+...++..+++ +.+|+..+.+++.+..+++.|+.++++.++.|+..
T Consensus 207 ~k~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~~~~--- 283 (372)
T PF00854_consen 207 LKALIRFLPIFLFWIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLRRGI--- 283 (372)
T ss_dssp CCHHHCHHHCCCHHHHHHHHCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHHHHCCCTTTT-----
T ss_pred eeeeeeccccCeEEEEeeehhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHHHHHhHHhhhcc---
Confidence 66677777777777778788777777776676677766777 89999999999999999999999999999988322
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccC
Q 007736 415 QGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLREC 494 (591)
Q Consensus 415 ~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~ 494 (591)
..++..++.+|++++.+++++....+.++.....++| ..+.+|.+..+++..+++.+..+...+...|.+
T Consensus 284 -~~~~~~k~~~G~~~~~~~~~~~~~v~~~r~~~~~~~~---------~~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a 353 (372)
T PF00854_consen 284 -QPSPPQKFGIGMVFAILAMFVAAIVEIRRLCYAQPCG---------KVSPWWQVPMYIFWLIPEYFLSGTGESAAYEFA 353 (372)
T ss_dssp -----HHHHHHH-HHHHHHHHTTTHHHH---HH----T---------T--THHHHHHHHHHHHHHHTTTTHHHHHHHHHT
T ss_pred -cchhhhhhhHHHHHHHHHHHHHHHHHhhhhhcccccC---------CCChhhHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence 2788899999999999999998887765554333333 345577779999999999999988888777777
Q ss_pred CcchhHHHHHHHHHHH
Q 007736 495 PKGMKTMSTGLFLSTL 510 (591)
Q Consensus 495 p~~~rg~~~gl~~~~~ 510 (591)
|++..+..+|++....
T Consensus 354 ~~~~p~~m~~~~~~~~ 369 (372)
T PF00854_consen 354 PSRAPSSMMGIWFALS 369 (372)
T ss_dssp TTT-SSSSTHHHHHHH
T ss_pred HHhhhHHHHHHHHHHh
Confidence 7777777777766554
No 85
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.81 E-value=2.9e-23 Score=225.03 Aligned_cols=397 Identities=15% Similarity=0.111 Sum_probs=232.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHH
Q 007736 68 ASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLV 147 (591)
Q Consensus 68 ~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (591)
.+.++..+...++..++++++|+++||+ |||++++++.++..++.++.+++... .+..
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~~---------------------~~~~ 103 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPSY---------------------NNFW 103 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccccc---------------------cccc
Confidence 3567888999999999999999999998 99999999999999999999987210 1788
Q ss_pred HHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccc---cccchhHHHH
Q 007736 148 VLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDN---LGREWGYGIC 224 (591)
Q Consensus 148 ~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~---~g~~~~f~~~ 224 (591)
.+.++|++.|++.|+..+....++.|..|++. |++..++.+.+..+|..++..++-.+.+. .+||..+.+.
T Consensus 104 ~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~ 177 (451)
T PF00083_consen 104 MLLIGRFLIGFGIGGAYVVSPIYISEIAPPKH------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFG 177 (451)
T ss_pred cccccccccccccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccccccc
Confidence 89999999999999999999999999999999 99999999988899988887766544333 3599988877
Q ss_pred HHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccCCCCCCCCcccccCCccccccccccCCCCcchhhhH
Q 007736 225 ACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLD 304 (591)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (591)
.+..++..+...+ .||+|+++...++.+++ ++...++.+.+..
T Consensus 178 ~~~~l~~~~~~~~--------------------------------~pESP~wL~~~~~~~~A-~~~l~~~~~~~~~---- 220 (451)
T PF00083_consen 178 AIPSLLVLLLRFF--------------------------------LPESPRWLLSKGRDEEA-EKVLRKLRGKEIE---- 220 (451)
T ss_pred ccccccccccccc--------------------------------cccccceeccccccccc-ccccccccccccc----
Confidence 7654433222111 34556666555544444 2222222111000
Q ss_pred HhhhccCCCCCccccccccccccCccchhHHHHHHHHHHHHHHHH-HHHHHHhccccceeeeeeccccccccccccccc-
Q 007736 305 KAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPIWATT-IIFWTVYAQMTTFSVSQATTMNRHIGSFEIPGA- 382 (591)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~- 382 (591)
..+.....+..++++..+..|+...+.. ..++++...+.+.... ...+....++.+..... . +....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~---------~~~~~~ 289 (451)
T PF00083_consen 221 DEEIEEIKAEKKESQESKASWRDLFRNK-KYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-A---------GISNSF 289 (451)
T ss_pred cccccccccccccccccceeeeeccccc-cccccccccccccccccccccccccccccccccc-c---------cccccc
Confidence 0000000000000000111222111111 0122222222111111 11101111111111110 0 11111
Q ss_pred cccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhcCCCCCCCCCc
Q 007736 383 SLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIFAMVAAAL-CEIKRLRAARSHGLTNDPTAEI 461 (591)
Q Consensus 383 ~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~ 461 (591)
.......+..++...+...+++|++|| +.+..+..+++++.+.+.. ... + .+.+ .
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~GRr-----------~~~i~~~~~~~~~~~~~~~~~~~---------~-~~~~---~ 345 (451)
T PF00083_consen 290 LATLILGLVNFLGTLLAIFLIDRFGRR-----------KLLIIGLLLMAICSLILGIIFFL---------G-VSSS---S 345 (451)
T ss_pred ccccccccccccccccccccccccccc-----------ccccccccccccccccccccccc---------c-cccc---c
Confidence 112222222233333334555555454 3356677777776666641 100 0 0000 0
Q ss_pred cchhhHHHHHHHHHHHHHH-HHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccC
Q 007736 462 PLSVFWLVPQFFLVGAGEA-FTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLN 540 (591)
Q Consensus 462 ~~~~~~li~~~~l~g~g~~-~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~ 540 (591)
..+... +....+...+.. ...+..+.+..|.+|.+.|+++.|+......+++++++.+.+.+.+..+
T Consensus 346 ~~~~~~-i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~----------- 413 (451)
T PF00083_consen 346 WWSILS-IVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG----------- 413 (451)
T ss_pred cccccc-ceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----------
Confidence 011211 222222222222 3346667889999999999999999999999999988888777654321
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHhhhccccccccccc
Q 007736 541 QGRLYDFYWLLAILSALNFVIYLAFARWYVYKDKRLAEE 579 (591)
Q Consensus 541 ~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 579 (591)
....+++.++.+++..++.+++.+++|+++.+|+++
T Consensus 414 ---~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~ 449 (451)
T PF00083_consen 414 ---GWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQE 449 (451)
T ss_pred ---ccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHh
Confidence 123577788888888888999999999999988764
No 86
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.81 E-value=1.3e-18 Score=182.61 Aligned_cols=326 Identities=12% Similarity=0.113 Sum_probs=205.1
Q ss_pred HHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 007736 52 AVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCN 131 (591)
Q Consensus 52 ~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~ 131 (591)
.+.+| .+.+++|++.++.+++.+.+.++..++.++.|+++||+ ||||++.++.++..++.+++ ..
T Consensus 20 ~~~lp-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~------------ 84 (355)
T TIGR00896 20 GPLLP-QIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SA------------ 84 (355)
T ss_pred cccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hh------------
Confidence 34444 46678999999999999999999999999999999998 99999999988887777665 33
Q ss_pred CCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhh
Q 007736 132 LNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYI 211 (591)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l 211 (591)
.+...+++.|++.|+|.+...+..+.++.|.+| ++ |+++.++++...++|..+++.+++.+
T Consensus 85 ------------~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~i~~~~~~~l 145 (355)
T TIGR00896 85 ------------PGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QR------VGLMTGLYSMALMGGAALAAAATVPL 145 (355)
T ss_pred ------------ccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-ch------hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367778899999999999888788888888886 46 89999999999999999999999888
Q ss_pred cccc--ccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccCCCCCCCCcccccCCcccccc
Q 007736 212 QDNL--GREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLDLPSDPSMFFNIDDIPVEGKK 289 (591)
Q Consensus 212 ~~~~--g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (591)
.+.. +|++.|.+.++..++..... .++.+++++++++
T Consensus 146 ~~~~~~~w~~~f~~~~~~~~~~~~~~---~~~~~~~~~~~~~-------------------------------------- 184 (355)
T TIGR00896 146 AQHSGGHWQQALAWWALPALLALLAW---IPQVRRRVAANQT-------------------------------------- 184 (355)
T ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHH---hhhhccccCCCCC--------------------------------------
Confidence 7765 38888876654433332221 1111111000000
Q ss_pred ccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHH-HHHHHHHHHHHHhccccceeeeeec
Q 007736 290 TKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRML-PIWATTIIFWTVYAQMTTFSVSQAT 368 (591)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (591)
.. ...+++.. ++ +...... ...+....++....+.+.++.. .
T Consensus 185 -------~~----------------------~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~ 227 (355)
T TIGR00896 185 -------TT----------------------RLTPVRIW-----RS-PLAWQVTVFFGLQSGLYYSLIGWLPAILIS--H 227 (355)
T ss_pred -------CC----------------------CCCCchhh-----cC-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--c
Confidence 00 00000000 11 1111111 1112222233333333332211 1
Q ss_pred cccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007736 369 TMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAA 448 (591)
Q Consensus 369 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~ 448 (591)
+.+.. ..+...+...+..++..++.+++.+|..+| ++.+.++..+.+++.+.+....
T Consensus 228 g~~~~------~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~----------~~~~~~~~~~~~~~~~~~~~~~------- 284 (355)
T TIGR00896 228 GASAA------TAGSLLALMQLAQAASALLIPALARRVKDQ----------RGIVAVLAVLQLVGLCGLLFAP------- 284 (355)
T ss_pred CCCHH------HHHHHHHHHHHHHHHHHHhHHHHHhhhccc----------hHHHHHHHHHHHHHHHHHHHhh-------
Confidence 11111 122333444455556666666665433211 1335667777777766565431
Q ss_pred hhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccC-CcchhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 007736 449 RSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLREC-PKGMKTMSTGLFLSTLSLGFFVSSLLVSLVHKV 527 (591)
Q Consensus 449 ~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~-p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~ 527 (591)
. ...+ ...++.|++.+...|...+.+.+.. +++.++..+|+.+....++..+++.+.|++.+.
T Consensus 285 -------------~-~~~~--~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~ 348 (355)
T TIGR00896 285 -------------M-HGLW--AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDI 348 (355)
T ss_pred -------------h-hHHH--HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1111 1346778888888887666665444 456779999999988899999999999999865
Q ss_pred c
Q 007736 528 T 528 (591)
Q Consensus 528 ~ 528 (591)
.
T Consensus 349 ~ 349 (355)
T TIGR00896 349 S 349 (355)
T ss_pred h
Confidence 4
No 87
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.80 E-value=4.5e-17 Score=174.10 Aligned_cols=167 Identities=14% Similarity=0.074 Sum_probs=134.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhh----chhHH-HHHHHHHHHHH
Q 007736 37 ILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTF----LGRYL-TIAIFATVQAA 111 (591)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~----~Grk~-~~~~~~~~~~i 111 (591)
++..++.+...+.....-+|.|+++ .|++.+++|++...... .+..++.|+++||+ +|||| .+.++.++.++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l 80 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAA 80 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHH
Confidence 4566777888888888899999985 59999999999776664 69999999999996 16665 67777788877
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
+...+++... ..+.+.+++..++.++..+...+...+++.|++|+++ |+++.+
T Consensus 81 ~~~~l~~~~~---------------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r~~~~~ 133 (402)
T PRK11902 81 SIAAMAFCPP---------------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------RGAGAA 133 (402)
T ss_pred HHHHHHhcCc---------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hhHHHH
Confidence 7777666411 1356666667677788888888999999999999999 999999
Q ss_pred hhHHHHhhchhhhhhhhhhhccc-cccchhHHHHHHHHHHHHH
Q 007736 192 WFFFFISIGSLAAVTVLVYIQDN-LGREWGYGICACAIVFGLV 233 (591)
Q Consensus 192 ~~~~~~~ig~~~~p~i~~~l~~~-~g~~~~f~~~~~~~~~~~~ 233 (591)
+...+.++|..+++.+++.+.+. .||+..|++.++..++..+
T Consensus 134 ~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l 176 (402)
T PRK11902 134 VKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGAL 176 (402)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988875 5999999987765554433
No 88
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.79 E-value=3.7e-17 Score=175.15 Aligned_cols=169 Identities=16% Similarity=0.117 Sum_probs=136.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHH
Q 007736 34 AAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGV 113 (591)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 113 (591)
++.+....++....+....+.+ +.+++++|++..+.+++.+.+.+++.++.++.|++.||+ |||+++.++.++.+++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~-~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMV-PQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 4444455555555543333444 556889999999999999999999999999999999998 99999999999999998
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhh
Q 007736 114 TILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWF 193 (591)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 193 (591)
+++..+... .+++.+++.|++.|+|.|...+...+++.+..|+++ |++..++.
T Consensus 83 ~l~~~~~~~---------------------~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~~~~~ 135 (410)
T TIGR00885 83 FLFWPAAEI---------------------MNYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRRLNLA 135 (410)
T ss_pred HHHHHHHhh---------------------ccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHHHHHH
Confidence 876544211 377888999999999999999999999999999888 88899999
Q ss_pred HHHHhhchhhhhhhhhhhccc--------------------------cccchhHHHHHHHHHHH
Q 007736 194 FFFISIGSLAAVTVLVYIQDN--------------------------LGREWGYGICACAIVFG 231 (591)
Q Consensus 194 ~~~~~ig~~~~p~i~~~l~~~--------------------------~g~~~~f~~~~~~~~~~ 231 (591)
+...++|..++|.+++.+... .+|+++|.+.++..++.
T Consensus 136 ~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~ 199 (410)
T TIGR00885 136 QSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAV 199 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998877422 36999998776654443
No 89
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.79 E-value=4.2e-17 Score=178.16 Aligned_cols=365 Identities=10% Similarity=0.075 Sum_probs=208.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhh----hhchh-HHHHHHHHHHHHH
Q 007736 37 ILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIAD----TFLGR-YLTIAIFATVQAA 111 (591)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD----~~~Gr-k~~~~~~~~~~~i 111 (591)
--++.+..++.+..+..+++.|+++.+|++...+|.+..+.-+.-++..|+.|+++| |+ || |+.++++....++
T Consensus 11 yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~-Grrrp~il~g~i~~~i 89 (473)
T PRK10429 11 YGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW-GKFKPWILIGTLANSV 89 (473)
T ss_pred hccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC-CCcchhHhhhhHHHHH
Confidence 335566677778888899999999999999999999999999999999999999999 55 88 5566667777777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCC-CCCChhhhhccchhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQF-DDSDPQERNQMTNFF 190 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~ 190 (591)
+..++... |... .......+++..++..++......+..++.+|+. ++++ |.+..
T Consensus 90 ~~~llf~~---p~~~---------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~e------R~~l~ 145 (473)
T PRK10429 90 VLFLLFSA---HLFE---------------GTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKRE------REQLV 145 (473)
T ss_pred HHHHHHcC---CCCC---------------ccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHH------HHHHH
Confidence 76666432 2110 0023444555566667788888888889999998 4565 99999
Q ss_pred hhhHHHHhhchhhhhhhhhhhccc-------cccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHH
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDN-------LGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAW 263 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~-------~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (591)
++.....++|+.+++.+...+.+. .+|+....+.++..++..+..+...+|... +++.++
T Consensus 146 ~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~-~~~~~~------------ 212 (473)
T PRK10429 146 PYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYS-SDNQVS------------ 212 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCC-cccccc------------
Confidence 887777777766665554433221 234444444443333333332222222110 000000
Q ss_pred hhcccCCCCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHH
Q 007736 264 RKRHLDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRML 343 (591)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (591)
++.+...+.+... .+.+.|.++..+
T Consensus 213 -------------------------------~~~~~~~~~~~~~------------------------~~~~n~~~~~ll 237 (473)
T PRK10429 213 -------------------------------AEGSHLTLKDIVA------------------------LIYKNDQLSCLL 237 (473)
T ss_pred -------------------------------ccccCCCHHHHHH------------------------HHhcCHHHHHHH
Confidence 0000000000000 000112222222
Q ss_pred HHHHHHHHHHHHhccccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHH
Q 007736 344 PIWATTIIFWTVYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRI 423 (591)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i 423 (591)
...+.........+....++...... +.. ....+.....+..++..++..++.+|+++| +.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~------~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk-----------~~~ 299 (473)
T PRK10429 238 GMALAYNIASNIINGFAIYYFTYVIG-DAD------LFPYYLSYAGAANLVTLILFPRLVKSLSRR-----------ILW 299 (473)
T ss_pred HHHHHHHHHHHHHhhheeeEEEEECC-CHH------HHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----------HHH
Confidence 22222222222222222333322111 111 011222233344455556666555333333 445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCC-------c
Q 007736 424 GVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECP-------K 496 (591)
Q Consensus 424 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p-------~ 496 (591)
.++..+.+++.+.+..... . ...+.+.+++..++.+++.+...+..++++.|.++ .
T Consensus 300 ~~~~~~~~~~~~~~~~~~~-----------~------~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~ 362 (473)
T PRK10429 300 AGASIFPVLSCGVLLLMGL-----------A------APHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGI 362 (473)
T ss_pred HHHHHHHHHHHHHHHHHhc-----------c------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCc
Confidence 6666665655554433200 0 11234444556677888888888888888888866 3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 007736 497 GMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTG 529 (591)
Q Consensus 497 ~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~ 529 (591)
+..|...|.+++...++..+++.+.|++.+..|
T Consensus 363 R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 363 RCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIG 395 (473)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 445778999999999999999999999987654
No 90
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.78 E-value=8.8e-17 Score=173.13 Aligned_cols=445 Identities=13% Similarity=0.069 Sum_probs=253.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhh----hchhHHHHHHH-HH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADT----FLGRYLTIAIF-AT 107 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~----~~Grk~~~~~~-~~ 107 (591)
.+..+....+..++++-...++++.|+ +++|.+....+++.....+...+.+++.|+++|| + ||||.++++ .+
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~~ 82 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGAA 82 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHHH
Confidence 455666666777888778888888887 5799999999999999999999999999999995 6 999998875 55
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccc
Q 007736 108 VQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMT 187 (591)
Q Consensus 108 ~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 187 (591)
..+++.++++++..+..+-. .++.. ...........++..+..++.....++..++++|.+|+++++ ++
T Consensus 83 ~~~~~l~ll~~~~~~~~~~~----~~~~~---~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~----~~ 151 (477)
T TIGR01301 83 LVAFAVILIGFAADIGHLFG----DNLDK---KTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARR----TR 151 (477)
T ss_pred HHHHHHHHHHhCchhhhhcc----ccccc---cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHH----HH
Confidence 55666666666422110000 00000 000011233444555556677777888899999999988721 36
Q ss_pred hhhhhhHHHHhhchhhhhhhhhhh--cccc-------------ccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChh
Q 007736 188 NFFNWFFFFISIGSLAAVTVLVYI--QDNL-------------GREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPL 252 (591)
Q Consensus 188 ~~~~~~~~~~~ig~~~~p~i~~~l--~~~~-------------g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (591)
.+.++++...++|+.+|+.++++. .+.+ +.+..|++.+++.++..++.++..+|.+..++++.+.
T Consensus 152 ~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~ 231 (477)
T TIGR01301 152 IANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFIN 231 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchh
Confidence 799999999999999999988865 2211 4677888888777777666665555432211110000
Q ss_pred hHHHHHHHHHHhhcccCCCCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccch
Q 007736 253 TQIASVFVVAWRKRHLDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTD 332 (591)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (591)
+ +.++. . ++.....+ +.-|+...
T Consensus 232 ~-------------------------~~~~~--------~--~~~~~~~~-------------------~~i~~~~~--- 254 (477)
T TIGR01301 232 S-------------------------EAAPP--------S--KHGEEAFF-------------------GELFGAFK--- 254 (477)
T ss_pred h-------------------------hcccc--------c--ccchhhhH-------------------HHHHHHHH---
Confidence 0 00000 0 00000000 00000000
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeccccccccccccccc-cccccchhhhhhhhhhhhhhhhhhhhhhc
Q 007736 333 VEEVKMVIRMLPIWATTIIFWTVYAQMTTFSVSQATTMNRHIGSFEIPGA-SLTFFFVGSILLTVPVYDRIIVPIARKVF 411 (591)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~r~~ 411 (591)
.--|.+.+.+...++...-|..+..+.+.+.-+.......-.+-....+ -......+...+...+.+.++.++.||.+
T Consensus 255 -~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g 333 (477)
T TIGR01301 255 -YLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWG 333 (477)
T ss_pred -HCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0112333444444444444444444444332221110000000000000 00111111111222244455555556643
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCC--ccch-hhHHHHHHHHHHHHHHHHhhhhhe
Q 007736 412 KTPQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAE--IPLS-VFWLVPQFFLVGAGEAFTYIGQLD 488 (591)
Q Consensus 412 ~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~-~~~li~~~~l~g~g~~~~~~~~~~ 488 (591)
.+ +..-.++.++.++++....+... .+++.+..++++.. .... .+..++.+.+.|+..+.....=++
T Consensus 334 ~~------k~~~~~s~~~~~~~l~~~~~i~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfa 403 (477)
T TIGR01301 334 AG------KRLWGIVNIILAICLAATVLVTY----VAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFA 403 (477)
T ss_pred cc------hhHHHHHHHHHHHHHHHHHHHHh----hhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHH
Confidence 21 12236788888888888876531 00000000000000 0111 255667778889998888877788
Q ss_pred eecccCCc--chhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 007736 489 FFLRECPK--GMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFA 566 (591)
Q Consensus 489 ~~~~~~p~--~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~ 566 (591)
++.+..|+ +..|..+|+.|..-.+...+.+...|.+.+..+ ++....+.+.++.++++++..++..
T Consensus 404 l~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g------------~~~~~~~~~~gv~~~~aa~~~~~~~ 471 (477)
T TIGR01301 404 LASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFG------------GGNLPAFVVGAVAAFVSGLLALILL 471 (477)
T ss_pred HHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcC------------CCCeeHHHHHHHHHHHHHHHHHHhC
Confidence 89998884 456999999999999999999988888665443 1122467778888888888888777
Q ss_pred hhcc
Q 007736 567 RWYV 570 (591)
Q Consensus 567 ~~~~ 570 (591)
|+.+
T Consensus 472 ~~~~ 475 (477)
T TIGR01301 472 PRPR 475 (477)
T ss_pred CCCC
Confidence 7654
No 91
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.78 E-value=2.6e-17 Score=172.71 Aligned_cols=154 Identities=14% Similarity=0.060 Sum_probs=117.7
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhh----chhHHHH-HHHHHHHHHHHHHHHHHhhcCCCCC
Q 007736 53 VNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTF----LGRYLTI-AIFATVQAAGVTILTISTIIPSLRP 127 (591)
Q Consensus 53 ~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~----~Grk~~~-~~~~~~~~i~~~l~~~~~~~~~~~~ 127 (591)
..+|.+ .+++|+|.++.+++... .+...+ .++.|+++||+ +||||.+ +.+.++.++....+++...
T Consensus 9 ~~~~~~-~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~------ 79 (356)
T TIGR00901 9 NTLPYW-LRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP------ 79 (356)
T ss_pred hHHHHH-HHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc------
Confidence 344555 45789999999999644 333334 89999999996 3899975 5566666666656655411
Q ss_pred CCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhh
Q 007736 128 PKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTV 207 (591)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i 207 (591)
..+...+....++.+++.+...+...+++.|++|+++ |+++.++...+.++|..+++.+
T Consensus 80 ---------------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~l 138 (356)
T TIGR00901 80 ---------------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE------LGYGSTIYIVGYRAGMLLSGSL 138 (356)
T ss_pred ---------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hchHHHHHHHHHHHHHHHHHHH
Confidence 1355566666777788888888899999999999998 9999999999999999999999
Q ss_pred hhhhccccc--------cchhHHHHHHHHHHHHHHHH
Q 007736 208 LVYIQDNLG--------REWGYGICACAIVFGLVVFL 236 (591)
Q Consensus 208 ~~~l~~~~g--------~~~~f~~~~~~~~~~~~~~~ 236 (591)
++.+....| ||..|++.++..++..+..+
T Consensus 139 ~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~ 175 (356)
T TIGR00901 139 ALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTL 175 (356)
T ss_pred HHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 999988888 99999988876665554433
No 92
>PRK09669 putative symporter YagG; Provisional
Probab=99.78 E-value=8.9e-17 Score=174.16 Aligned_cols=173 Identities=14% Similarity=0.114 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhh---chhH-HHHHHHHHHHH
Q 007736 35 AMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTF---LGRY-LTIAIFATVQA 110 (591)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~---~Grk-~~~~~~~~~~~ 110 (591)
+.--+..+..+..+..+..+++.|+++.+|++...++.+..+..+...+..|+.|+++||. +||| +.++++.+..+
T Consensus 12 ~~yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~ 91 (444)
T PRK09669 12 IGYGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFG 91 (444)
T ss_pred HhhcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHH
Confidence 3334555666666777788999999999999999999999999999999999999999993 2774 45556666666
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCC-CChhhhhccchh
Q 007736 111 AGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDD-SDPQERNQMTNF 189 (591)
Q Consensus 111 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~ 189 (591)
++..++... |..+ .......+++..++.+++......+..++.+|+.++ ++ |.+.
T Consensus 92 i~~~l~f~~---p~~~---------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~e------R~~l 147 (444)
T PRK09669 92 VVCLLTFYT---PDFG---------------ATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRE------RHSL 147 (444)
T ss_pred HHHHHHHhC---CCCC---------------cchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHH------HHHH
Confidence 666555432 2111 013455556666666666667777788999998844 44 8888
Q ss_pred hhhhHHHHhhchhhhhhhhhhhcc-------ccccchhHHHHHHHHHHH
Q 007736 190 FNWFFFFISIGSLAAVTVLVYIQD-------NLGREWGYGICACAIVFG 231 (591)
Q Consensus 190 ~~~~~~~~~ig~~~~p~i~~~l~~-------~~g~~~~f~~~~~~~~~~ 231 (591)
.++.....++|+.+++.+...+.. ..||+..+.+.+++.++.
T Consensus 148 ~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~ 196 (444)
T PRK09669 148 QSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVL 196 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHH
Confidence 888888888888887765443322 235666665555444433
No 93
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.77 E-value=2.1e-18 Score=177.26 Aligned_cols=441 Identities=14% Similarity=0.042 Sum_probs=233.1
Q ss_pred CCchhHHHHHHH---HHHHHHHHHHHHHHHHHHhhhhc-------CCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchh
Q 007736 29 GGWTSAAMILGG---EACERLTTLGIAVNLVTYLTGTM-------HLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGR 98 (591)
Q Consensus 29 ~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~yl~~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Gr 98 (591)
.+|+.+-.+.++ -+.+....+.+....+.+-.-.. |+++...+.+.++..++..+++++.||++||+ ||
T Consensus 35 ~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GR 113 (538)
T KOG0252|consen 35 LQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GR 113 (538)
T ss_pred hhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cc
Confidence 356655555444 33455555555544444322222 25677888888889999999999999999998 99
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCC
Q 007736 99 YLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDS 178 (591)
Q Consensus 99 k~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 178 (591)
|+++-..++++.+++++++++-. +|. ...-...+...|+++|+|.|+.+|...++.+|..-++
T Consensus 114 K~vYG~~liImIi~t~~~~~s~~-----------~~~------~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~ 176 (538)
T KOG0252|consen 114 KKVYGKELIIMIICSALSGLSVG-----------TTS------PLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKK 176 (538)
T ss_pred hhhhhHHHHHHHHHHHHhccCCC-----------CCC------CcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhc
Confidence 99999999999999997776521 111 1135667888999999999999999999999988877
Q ss_pred ChhhhhccchhhhhhHHHHhhchhhhhh----hhhhhcccc-----------ccchhHHHHHHHHHHHHHHHHhcCCcee
Q 007736 179 DPQERNQMTNFFNWFFFFISIGSLAAVT----VLVYIQDNL-----------GREWGYGICACAIVFGLVVFLSGTRRYR 243 (591)
Q Consensus 179 ~~~~~~~r~~~~~~~~~~~~ig~~~~p~----i~~~l~~~~-----------g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 243 (591)
. |+...++.....+.|...|.+ +.+-+.... =||..|.+.++ .+++++++..+..+
T Consensus 177 ~------RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~v---pa~~~ly~Rl~M~E 247 (538)
T KOG0252|consen 177 T------RGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAV---PALLVLYFRLKMPE 247 (538)
T ss_pred c------ccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHH---HHHHHHHhhhcCCc
Confidence 7 887777654444444444433 333221111 28887776665 33344433222111
Q ss_pred eccCCCChhhHH-HHHHHHHHhhcccCCCCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccc
Q 007736 244 FKKLVGSPLTQI-ASVFVVAWRKRHLDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVI 322 (591)
Q Consensus 244 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (591)
....+.. .+-..++. .+..+.... +.++ +... +.+. ...
T Consensus 248 -----t~~Y~al~~~~~~~a~-~d~~k~~~~-----~~~~-----------------------~~~~-~~~~-----~~~ 287 (538)
T KOG0252|consen 248 -----TARYTALVSKKLKQAA-GDMKKVLSV-----DIEA-----------------------ESTA-ESDV-----PPP 287 (538)
T ss_pred -----chhHHHHhhcCHhhhh-hcccccccc-----ccch-----------------------hhcc-ccCC-----CCc
Confidence 1111100 00000011 000000000 0000 0000 0000 001
Q ss_pred ccc-ccCccchhHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeecccccccc----cccc----ccccccccchh-hh
Q 007736 323 NKW-NLATLTDVEEVKMVIRMLPIWATTIIFWTVYAQMTTFSVSQATTMNRHIG----SFEI----PGASLTFFFVG-SI 392 (591)
Q Consensus 323 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~----~~~~~~~~~~~-~~ 392 (591)
+.+ .+.. ..+.+. .-.-++.....+++......+.-..+..- -.++| .... ..+....+... ..
T Consensus 288 ~~~~~~F~----~~f~~~-hg~~Llgt~~~WFllDiafy~~nL~~s~I-~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~ 361 (538)
T KOG0252|consen 288 SNSFGLFS----RLFLRW-HGKHLLGTAGTWFLLDIAFYGQNLFQSVI-FSAIGVIPSANTYHELFKVAEGNLIIAVCST 361 (538)
T ss_pred ccccchHH----HHHHHH-HHHHHHHHHHHHHhhhhhhhccccHHHHH-HHhhccCCCcchHHHHHHHHHHHHHHHHHcc
Confidence 111 0001 111111 11111222222222222111111111000 00010 0000 00000111111 11
Q ss_pred hhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHH
Q 007736 393 LLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQF 472 (591)
Q Consensus 393 ~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~ 472 (591)
+-+-++.-.++++++|| ..-+.|++++.+.++.++....+ ..+....++.+
T Consensus 362 vPGyw~tv~~id~iGRk-----------~iq~~GF~~~~i~~~~~~~~y~~------------------~~~~~Gf~v~y 412 (538)
T KOG0252|consen 362 VPGYWFTVYFIDIIGRK-----------YIQLMGFFIMTIFFFVIAGPYNQ------------------LENTIGFVVLY 412 (538)
T ss_pred CCceeEEEEEeehhhhH-----------HHHHhhHHHHHHHHHHHcCCccc------------------ccccCceeehH
Confidence 11223444455555555 44677888888888777753210 11222223333
Q ss_pred HHHHHHHHHH-hhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHH
Q 007736 473 FLVGAGEAFT-YIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLL 551 (591)
Q Consensus 473 ~l~g~g~~~~-~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~ 551 (591)
.+..+...+. ......+..|.+|.+.||+.-|+...+...|..+|...+++..+. ++ |... .....++++
T Consensus 413 ~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~-----~y-p~~~---g~~~v~~i~ 483 (538)
T KOG0252|consen 413 SLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDH-----NY-PPNI---GVRNVFIIL 483 (538)
T ss_pred HHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhc-----cC-Cccc---cchHHHHHH
Confidence 3333333332 245667889999999999999999999999999999999888651 11 1111 133578889
Q ss_pred HHHHHHHHHHHHHHhhhccccccccccccc
Q 007736 552 AILSALNFVIYLAFARWYVYKDKRLAEEGI 581 (591)
Q Consensus 552 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 581 (591)
++.++++.++.+++- ++|+++++|++.+.
T Consensus 484 ~~~~~~gi~~T~l~p-Etk~~~leei~~e~ 512 (538)
T KOG0252|consen 484 AGCMLLGILFTLLIP-ETKGKSLEEISNEE 512 (538)
T ss_pred HHHHHHhHheeEEee-cccccCHHHhcChh
Confidence 999998888766655 99999998875433
No 94
>PRK09848 glucuronide transporter; Provisional
Probab=99.76 E-value=3e-16 Score=170.26 Aligned_cols=365 Identities=10% Similarity=0.064 Sum_probs=198.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhh---chhHHHH-HHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTF---LGRYLTI-AIFATV 108 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~---~Grk~~~-~~~~~~ 108 (591)
..+.-.+..+..+..+....++++.|+++.+|++..++|.+.....+...+..++.|+++||. +||||.. .++.+.
T Consensus 9 ~~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~ 88 (448)
T PRK09848 9 TIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAP 88 (448)
T ss_pred HHHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHH
Confidence 334444566677778777888889999999999999999999999999999999999999994 3667644 555554
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccch
Q 007736 109 QAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTN 188 (591)
Q Consensus 109 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 188 (591)
..+...++... |. +. ........+++..++.+++.+...++..++..+..++.+. |.+
T Consensus 89 ~~~~~~~~~~~---~~----------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~-----r~~ 146 (448)
T PRK09848 89 LMIFSVLVFWV---PT----------DW----SHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQS-----RAR 146 (448)
T ss_pred HHHHHHHHHhC---cC----------CC----CcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHH-----HHH
Confidence 54444443221 10 00 0001334445555667788888887777877777655331 777
Q ss_pred hhhhhHHH-----HhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHH
Q 007736 189 FFNWFFFF-----ISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAW 263 (591)
Q Consensus 189 ~~~~~~~~-----~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (591)
..++..++ .+++..++|.+.+.........+..+. .+..+++.+.++......+++.+++.+.+
T Consensus 147 ~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~e~~~~~~~~~---------- 215 (448)
T PRK09848 147 LGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWT-IVLAIAGMVLYFICFKSTRENVVRIVAQP---------- 215 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHH-HHHHHHHHHHHHHHHcCcEeccCCCccCC----------
Confidence 66665443 345556666665543211111111111 11122222222111111111111000000
Q ss_pred hhcccCCCCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHH
Q 007736 264 RKRHLDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRML 343 (591)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (591)
...+. ++ ...+.|.+....
T Consensus 216 -------------------------------------~~~~~-------------------~~-----~l~~n~~f~~~~ 234 (448)
T PRK09848 216 -------------------------------------SLKIS-------------------LQ-----TLKRNRPLFMLC 234 (448)
T ss_pred -------------------------------------CHHHH-------------------HH-----HHhCCchHHHHH
Confidence 00000 00 000111222222
Q ss_pred HHHHHHHHHHHHhccccceeeeeeccccccccccccccccccccc-hhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhH
Q 007736 344 PIWATTIIFWTVYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFF-VGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQR 422 (591)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~ 422 (591)
....+....+..+.....++.....+.+.. ...+.... .+..++..++..++. +|. +..+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-------~~~~~~~~~~~~~~~~~~l~~~l~----~r~-------g~~~~ 296 (448)
T PRK09848 235 IGALCVLISTFAVSASSLFYVRYVLNDTGL-------FTVLVLVQNLVGTVASAPLVPGMV----ARI-------GKKNT 296 (448)
T ss_pred HHHHHHHHHHHHHhhhheeeEeeecCChHH-------HHHHHHHHHHHHHHHHHHHHHHHH----HHh-------CcHHH
Confidence 111111111122222223333222111110 01111111 222334445555544 442 23356
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcc-----
Q 007736 423 IGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKG----- 497 (591)
Q Consensus 423 i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~----- 497 (591)
+.+|.++.+++.+.+.+. ...+.+.+++..++.++|+++..+..+++..+..|.+
T Consensus 297 ~~~g~~~~~i~~~~~~~~--------------------~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g 356 (448)
T PRK09848 297 FLIGALLGTCGYLLFFWV--------------------SVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTG 356 (448)
T ss_pred HHHHHHHHHHHHHHHHHc--------------------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhC
Confidence 778888888877666542 1224455556677889999999988888988888754
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 007736 498 --MKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTG 529 (591)
Q Consensus 498 --~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~ 529 (591)
.+|..+|++++.+.+|..+|+.+.+.+.+..|
T Consensus 357 ~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 357 VRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 46999999999999999999999999876643
No 95
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.75 E-value=5e-17 Score=164.49 Aligned_cols=148 Identities=14% Similarity=0.124 Sum_probs=135.3
Q ss_pred hcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccccc
Q 007736 62 TMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQA 141 (591)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (591)
.++-+++++|++.+.+.+.+.+..++.|.+.||+ |+|-.+++|++++..+++++++.
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg---------------------- 156 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFG---------------------- 156 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHc----------------------
Confidence 4567788999999999999999999999999997 99999999999999999999997
Q ss_pred chhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccccccchhH
Q 007736 142 SGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGY 221 (591)
Q Consensus 142 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f 221 (591)
.++++++++|.++|+|.++...+..++++|.||++.. |++++|+.-.+..+|-.+||.++|.+.+..|++.+|
T Consensus 157 --~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~e-----r~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPF 229 (464)
T KOG3764|consen 157 --NSYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNE-----RGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPF 229 (464)
T ss_pred --chhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchh-----hhHHHHHHHHHHhccceecCCcccchHhhcCCcCcH
Confidence 6888999999999999999999999999999998873 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcC
Q 007736 222 GICACAIVFGLVVFLSGT 239 (591)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~ 239 (591)
.+.++++++-..+-++..
T Consensus 230 lVL~~v~Lld~~L~l~vi 247 (464)
T KOG3764|consen 230 LVLAIVLLLDGALQLLVI 247 (464)
T ss_pred HHHHHHHHHHHHHHHhee
Confidence 999887777655544433
No 96
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.73 E-value=1.8e-16 Score=159.63 Aligned_cols=119 Identities=16% Similarity=0.123 Sum_probs=108.3
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccc
Q 007736 63 MHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQAS 142 (591)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (591)
.+.+..-.|.+-+.|.+..++.++..|.+|||| |||+++.++++..++..++.+.+
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S----------------------- 118 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALS----------------------- 118 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHH-----------------------
Confidence 344667889999999999999999999999999 99999999999999999999887
Q ss_pred hhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhcc
Q 007736 143 GMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQD 213 (591)
Q Consensus 143 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~ 213 (591)
.++..+.++|++.|+..|-. +.+.++++|.+++++ |+.+++..+.+..+|..+||.++|++.+
T Consensus 119 -~~F~afv~aR~l~Gi~kgnl-~v~rAiisdV~sek~------r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 119 -RNFAAFVLARFLGGIFKGNL-SVIRAIISDVVSEKY------RPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred -HHHHHHHHHHHhhhhccCch-HHHHHHHHhhcChhh------ccceeeeeehhhhcchhhcchhhhHHHh
Confidence 57767777799999999876 577899999999999 9999999999999999999999999987
No 97
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.73 E-value=6e-16 Score=173.98 Aligned_cols=179 Identities=11% Similarity=0.158 Sum_probs=137.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHH
Q 007736 29 GGWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATV 108 (591)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~ 108 (591)
..++-+...+....+.+..+.++.....+.+.++++++.++.|++.+.+.+++.++.++.|+++||+ ||||.+.++.++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ll 107 (633)
T TIGR00805 29 SKIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCAI 107 (633)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHHH
Confidence 3344444444445555556667777777788899999999999999999999999999999999997 999999999999
Q ss_pred HHHHHHHHHHHhhcCC----------------CCCCCCCCCCC---------Ccccccc--hhHHHHHHHHHHHHHhccc
Q 007736 109 QAAGVTILTISTIIPS----------------LRPPKCNLNHG---------QSCIQAS--GMQLVVLYIALYLTALGTG 161 (591)
Q Consensus 109 ~~i~~~l~~~~~~~~~----------------~~~~~~~~~~~---------~~~~~~~--~~~~~~~~~~~~l~g~g~g 161 (591)
++++.+++++...+.. .....|..++. ..|.... ......++++|+++|+|.+
T Consensus 108 ~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~ 187 (633)
T TIGR00805 108 MGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGAT 187 (633)
T ss_pred HHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCC
Confidence 9999999887521100 00112211110 1121111 1245677899999999999
Q ss_pred cccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccc
Q 007736 162 GLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDN 214 (591)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~ 214 (591)
...+...+++.|++|+++ |+.++++++.+..+|..+|+++++++.+.
T Consensus 188 ~~~~~~~~~i~d~~~~~~------~~~~~~i~~~~~~iG~~lG~llgg~l~~~ 234 (633)
T TIGR00805 188 PIFPLGISYIDDFAKSKN------SPLYIGILESIAVFGPAFGYLLGSFCLQI 234 (633)
T ss_pred cchhcCchhhhccCCccc------cHHHHHHHHHHHHhhhHHHHHHHHHHHhc
Confidence 999999999999999999 99999999999999999999999988754
No 98
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.73 E-value=1.6e-15 Score=167.74 Aligned_cols=140 Identities=14% Similarity=0.099 Sum_probs=125.8
Q ss_pred hhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccc
Q 007736 61 GTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQ 140 (591)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (591)
+..+.+.....+..+++.++..+++++.|+++||+ |||+++++++++.+++.++.+++
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a--------------------- 168 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFA--------------------- 168 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHh---------------------
Confidence 45667888888999999999999999999999996 99999999999999999999988
Q ss_pred cchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccccccchh
Q 007736 141 ASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDNLGREWG 220 (591)
Q Consensus 141 ~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~ 220 (591)
+++..+++.|++.|++.++...+...+++|+++++. |+.+..+ ......++.++|.+++++.. +||+.
T Consensus 169 ---~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~------R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~ 236 (521)
T KOG0255|consen 169 ---PNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ------RGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWL 236 (521)
T ss_pred ---CcHHHHHHHHHHHHhhccchhHHhHhhheeecCcch------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHH
Confidence 699999999999999999999999999999999999 9999999 77777888889999998887 89999
Q ss_pred HHHHHHHHHHHHHH
Q 007736 221 YGICACAIVFGLVV 234 (591)
Q Consensus 221 f~~~~~~~~~~~~~ 234 (591)
+++..+..++.++.
T Consensus 237 ~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 237 FWIISIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHHHHHH
Confidence 99887765554444
No 99
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.73 E-value=1.2e-15 Score=162.26 Aligned_cols=176 Identities=14% Similarity=0.034 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHH--HHHHHHHHHHHHhhh-HHHhhhhchhHHHHHHHHHHH-
Q 007736 34 AAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANT--VTNFLGTSFMLCLLG-GFIADTFLGRYLTIAIFATVQ- 109 (591)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~-G~laD~~~Grk~~~~~~~~~~- 109 (591)
...++..++.+...+....+.+|.|+++ .|.|.+++|.. .+.+....++..++. ++.+||+ ||||..++.+.+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~-~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRE-DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHH
Confidence 4566778888999988889999999974 69999999997 466677787777777 6689997 9999976665332
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchh
Q 007736 110 AAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNF 189 (591)
Q Consensus 110 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 189 (591)
++....++.. .+. . .....++....+.++..+...+...++..|..++++ ++.+
T Consensus 81 ~~~~~~~~~~--~~~-----------------~-~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~------~~~~ 134 (390)
T TIGR02718 81 SACLASLALV--GPD-----------------V-AGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT------LAKG 134 (390)
T ss_pred HHHHHHHHcC--Ccc-----------------h-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hhHH
Confidence 2122222211 010 0 112233334444556666666666777777777766 7777
Q ss_pred hhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHh
Q 007736 190 FNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLS 237 (591)
Q Consensus 190 ~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 237 (591)
.+....+..+|..+|+.+.+++.+.+||+..|++.++..++..+..+.
T Consensus 135 ~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~ 182 (390)
T TIGR02718 135 NAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLW 182 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888999999988889999999999999888766555444333
No 100
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.73 E-value=5.4e-15 Score=157.08 Aligned_cols=353 Identities=14% Similarity=0.063 Sum_probs=197.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q 007736 37 ILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTIL 116 (591)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~ 116 (591)
+....++....+-...++++.|+++ .|+|..|+|.+.+...+...+++++.|+++||+..+||.+.+..++.++...+.
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 4445555555666677899999975 789999999999999999999999999999998457888877666666655444
Q ss_pred HHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHH
Q 007736 117 TISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFF 196 (591)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 196 (591)
... .+.+.+++..++..+......|...++..+...+ +..-+|-....
T Consensus 86 ~~~------------------------~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--------~~~~YG~iRlw 133 (400)
T PF03825_consen 86 AFS------------------------SSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--------RGKDYGRIRLW 133 (400)
T ss_pred HHh------------------------ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--------ccCCCCcchhh
Confidence 443 3566666666667777777777777777776552 33334444455
Q ss_pred Hhhchhhhhhh-hhhhccccc---cchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccCCCC
Q 007736 197 ISIGSLAAVTV-LVYIQDNLG---REWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLDLPS 272 (591)
Q Consensus 197 ~~ig~~~~p~i-~~~l~~~~g---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (591)
+.+|.+++... ++.+....+ ....+++.+...++.. .+.+..++.+.++..+++.+
T Consensus 134 GSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~-~~~l~lp~~~~~~~~~~~~~------------------- 193 (400)
T PF03825_consen 134 GSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLA-GFALFLPKTPPKRSAKESVK------------------- 193 (400)
T ss_pred hhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHH-HHHHhCCCCccccccCCCcc-------------------
Confidence 55666655333 222322222 2234444443322221 12222333221110000000
Q ss_pred CCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHHHHHHHHHH
Q 007736 273 DPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPIWATTIIF 352 (591)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (591)
.. ...+. +++. ++.+.....+..++.....
T Consensus 194 -----------------------~~---~~~~~-------------------~~ll-----k~~~~~~Fll~~~l~~~~~ 223 (400)
T PF03825_consen 194 -----------------------KL---LGLDA-------------------LKLL-----KNPRFLVFLLAAFLIGISH 223 (400)
T ss_pred -----------------------cc---cchHH-------------------HHHh-----cCccHHHHHHHHHHHHHHH
Confidence 00 00000 0000 1111111122222222222
Q ss_pred HHHhccccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHH
Q 007736 353 WTVYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIF 432 (591)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~ 432 (591)
...++..+.+..... ..... ..+...++..+.-+..- .+..|+.+| .+..+.+.++.+..++
T Consensus 224 ~~~~~f~~~yl~~~g-g~~~~------~~g~~~~l~~~aEi~~f----~~~~~~~~r-------~g~~~ll~~a~~~~~v 285 (400)
T PF03825_consen 224 AAYYTFFSIYLQELG-GYSGS------TIGILWALGVVAEIPFF----FFSGRFLKR-------FGIKWLLLLALVAYAV 285 (400)
T ss_pred HHHHHHHHHHHHHcc-cchhh------HHHHHHHHHHHHHHHHH----HHHHHHHHh-------cCHHHHHHHHHHHHHH
Confidence 222222222211110 00000 01111111111111222 222333355 5566778889999988
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCCCCccch--hhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHH-
Q 007736 433 AMVAAALCEIKRLRAARSHGLTNDPTAEIPLS--VFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLST- 509 (591)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~- 509 (591)
-..+++... .+.. +........+.|+.+++...+...++.+.+|++.|++++|+++..
T Consensus 286 R~~l~a~~~-------------------~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~ 346 (400)
T PF03825_consen 286 RWLLYAYFS-------------------DPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALS 346 (400)
T ss_pred HHHHHHHhc-------------------CCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHH
Confidence 888887752 0111 111222345799999999999999999999999999999999865
Q ss_pred HHHHHHHHHHHHHHhhcccC
Q 007736 510 LSLGFFVSSLLVSLVHKVTG 529 (591)
Q Consensus 510 ~~lg~~lg~~l~~~i~~~~~ 529 (591)
.++|..+|+.++|++.+..+
T Consensus 347 ~Glg~~iG~~igG~l~~~~g 366 (400)
T PF03825_consen 347 FGLGGAIGSLIGGWLYDAFG 366 (400)
T ss_pred hhHHHHHHHHHHHHHHHHhc
Confidence 68999999999999987654
No 101
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.72 E-value=2.6e-15 Score=163.52 Aligned_cols=379 Identities=14% Similarity=0.110 Sum_probs=215.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhch-----hHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLG-----RYLTIAIFAT 107 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~G-----rk~~~~~~~~ 107 (591)
....+...++.+.+. +.+...++.++++++|+++++++...+...+...+-.+ +|.++||+ + ||+.+.++.+
T Consensus 27 ~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~~~~ 103 (468)
T TIGR00788 27 VLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVLSGL 103 (468)
T ss_pred HHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHHHHH
Confidence 445555578888888 88888889999999999999999888888888777555 99999998 7 6777777765
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccc
Q 007736 108 VQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMT 187 (591)
Q Consensus 108 ~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 187 (591)
+.. ...+..++.. + .......+.+++.+++.+.......++..|..+ ++++ .++
T Consensus 104 l~~-~~~~~~l~~~-~--------------------~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~---~~~ 157 (468)
T TIGR00788 104 LGS-AILYGLLPGK-V--------------------SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPS---AGP 157 (468)
T ss_pred HHH-HHHHHhcccc-c--------------------chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCC---cCC
Confidence 542 1222222200 0 233334446788899999988999999999998 4411 134
Q ss_pred hhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceee-ccCCCChhhHHHHHHHHHHhhc
Q 007736 188 NFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRF-KKLVGSPLTQIASVFVVAWRKR 266 (591)
Q Consensus 188 ~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 266 (591)
...++.+.+.++|..+++.++|.+.+.++|+..|++.+...++..+.. ...+|.++ ..++......
T Consensus 158 ~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~-~~~~E~~~~~~~~~~~~~~------------ 224 (468)
T TIGR00788 158 SLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVS-NLSKERRAFVRPRIGTYLE------------ 224 (468)
T ss_pred CeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHH-Hhcccccccccccccccch------------
Confidence 455555566679999999999999999999999988876655553322 32333210 1111000000
Q ss_pred ccCCCCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHHHH
Q 007736 267 HLDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPIW 346 (591)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (591)
.+. ........+..... .+.-|+ ....+.+... .
T Consensus 225 ----------~~~----------------~~~~~~~~~~~~~~-----------~~~l~~------~l~~~~i~~~---l 258 (468)
T TIGR00788 225 ----------MNM----------------ALLTLGVLANVKVQ-----------ILGLRG------AIQLLEIAKP---L 258 (468)
T ss_pred ----------hhh----------------hhhhhhHHHHHHHH-----------HHHHHH------HHhcHHHHHH---H
Confidence 000 00000000000000 000000 0001111111 1
Q ss_pred HHHHHHHHHhcccc-ceeeeeecccccccccccccccc---ccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhH
Q 007736 347 ATTIIFWTVYAQMT-TFSVSQATTMNRHIGSFEIPGAS---LTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQR 422 (591)
Q Consensus 347 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~ 422 (591)
.+..+.+....... +.+..... .+ +.++.. ......+..+++..+.+++ .+| .+.++.
T Consensus 259 ~fifl~~~~~~~~~~~~f~~~~~----~l---G~s~~~~G~~~~~~~v~~i~g~~~~~~~----~~~-------~~~r~~ 320 (468)
T TIGR00788 259 IFIFLSYANLPGASGSVFCATTQ----CL---PGGPSFSGMSKVVGNLGSLCGVGGYDRF----LKT-------FPYRLL 320 (468)
T ss_pred HHHHHHHhhcCCCCceeEEEEcc----cC---CCCcchhhhHHHHHHHHHHHHHHHHHHH----Hhh-------CCHHHH
Confidence 11111022212222 22222111 11 222222 2222233333333343333 344 345566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHH
Q 007736 423 IGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMS 502 (591)
Q Consensus 423 i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~ 502 (591)
+.++.++.+++.+....... +... ..| ..+.+++....++.+++.++...+...++.+.+|++.+|+.
T Consensus 321 l~~~~~l~~~~~~~~~~l~~-~~~~--~~g---------i~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~ 388 (468)
T TIGR00788 321 FGVTTLLYTLSSLFDLILVK-RWNL--AFG---------ISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSV 388 (468)
T ss_pred HHHHHHHHHHHHhCceeeee-cccc--ccC---------CCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehH
Confidence 77777777776544322110 0000 000 01223444556778888888888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccC
Q 007736 503 TGLFLSTLSLGFFVSSLLVSLVHKVTG 529 (591)
Q Consensus 503 ~gl~~~~~~lg~~lg~~l~~~i~~~~~ 529 (591)
.|+.+...++|..+++.+++.+.+..|
T Consensus 389 ~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 389 FALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999998886553
No 102
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.72 E-value=3.8e-16 Score=168.42 Aligned_cols=357 Identities=15% Similarity=0.143 Sum_probs=224.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhh----hhchhHHH-HHHHHHHHHHHHHH
Q 007736 41 EACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIAD----TFLGRYLT-IAIFATVQAAGVTI 115 (591)
Q Consensus 41 ~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD----~~~Grk~~-~~~~~~~~~i~~~l 115 (591)
.+..++.+.....+++.|+++.+|+++...+.+.....+..++..|+.|+++| |+ ||||- ++++....+++..+
T Consensus 10 ~~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~l 88 (428)
T PF13347_consen 10 DLGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFL 88 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHH
Confidence 35556666667778899999999999999999999999999999999999999 66 87664 44677777777777
Q ss_pred HHHHhhcC-CCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhH
Q 007736 116 LTISTIIP-SLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFF 194 (591)
Q Consensus 116 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 194 (591)
+.... | ..+ .......+.+..++..++......+..++.+|..++++. |.+..++..
T Consensus 89 lf~~~--p~~~~---------------~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~-----R~~l~~~~~ 146 (428)
T PF13347_consen 89 LFSPP--PAGLS---------------FTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDE-----RTRLSSWRM 146 (428)
T ss_pred hhccc--cchhh---------------hhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhh-----hhhHHHHHH
Confidence 76430 1 000 001334456666677888889889999999999985432 999999988
Q ss_pred HHHhhchhhhhhhhhhhcccc-------ccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcc
Q 007736 195 FFISIGSLAAVTVLVYIQDNL-------GREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRH 267 (591)
Q Consensus 195 ~~~~ig~~~~p~i~~~l~~~~-------g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (591)
.+..+|..++..+.+.+.+.. +|++...+.+++.++..++.+...+|.+.+.+++++.
T Consensus 147 ~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~~--------------- 211 (428)
T PF13347_consen 147 IFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEKK--------------- 211 (428)
T ss_pred HHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeeccccccccccc---------------
Confidence 888888876666666555332 4666666665555554444444434311111100000
Q ss_pred cCCCCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHHHHH
Q 007736 268 LDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPIWA 347 (591)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (591)
.+ .+..++.. .+.|.+...+....
T Consensus 212 --------------------------------~~-------------------~~~~~~~~-----~~nr~~~~l~~~~~ 235 (428)
T PF13347_consen 212 --------------------------------IS-------------------LRDSLRSL-----FRNRPFRILLLAFF 235 (428)
T ss_pred --------------------------------cc-------------------cccchhhh-----cccchHHHHHHHHH
Confidence 00 00000000 00111222222211
Q ss_pred HHHHHHHHhccccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHH
Q 007736 348 TTIIFWTVYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGL 427 (591)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~ 427 (591)
+....+...+....++.....+.+ + ..+.......+..++..++..++..|+++| +.+..+.
T Consensus 236 ~~~~~~~~~~~~~~y~~~~vl~~~------~-~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~-----------~~~~~~~ 297 (428)
T PF13347_consen 236 LQWLAFALMNTFLPYYFTYVLGNE------G-LISIFMLIFFVASIVGSPLWGRLSKRFGKK-----------KVYIIGL 297 (428)
T ss_pred HHHhhhhhhhhHHHHHHHHHhcCc------h-hhHHHHHHHHHHHHHHHHHHHHHHHHccce-----------eehhhhH
Confidence 111111111111122221111111 0 112223344455566667776666444333 4578888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCc-------chhH
Q 007736 428 VLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPK-------GMKT 500 (591)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~-------~~rg 500 (591)
.+.+++.+++.+.. +.+.+++.+..++.+++.+...+..+++..|..+. +..|
T Consensus 298 ~~~~~~~~~~~~~~--------------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g 357 (428)
T PF13347_consen 298 LLAALGFLLLFFLG--------------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREG 357 (428)
T ss_pred HHHHHHHHHHHHHH--------------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchH
Confidence 88888888877652 24667777888999999999998889999998873 4469
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 007736 501 MSTGLFLSTLSLGFFVSSLLVSLVHKVTG 529 (591)
Q Consensus 501 ~~~gl~~~~~~lg~~lg~~l~~~i~~~~~ 529 (591)
...|++++...++..+++.+.+.+.+..|
T Consensus 358 ~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 358 MYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred HHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999987654
No 103
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.71 E-value=3.7e-15 Score=162.92 Aligned_cols=150 Identities=13% Similarity=0.097 Sum_probs=123.0
Q ss_pred HHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 007736 54 NLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLN 133 (591)
Q Consensus 54 ~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 133 (591)
....++.+++|-+ ....|+.+...++..+..++.|.|+|.+ |||..++.+.++..+|.++++.+
T Consensus 65 ~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA-------------- 128 (599)
T PF06609_consen 65 SILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATA-------------- 128 (599)
T ss_pred HHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcC--------------
Confidence 4456888888865 5677888899999999999999999997 99999999999999999999987
Q ss_pred CCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhcc
Q 007736 134 HGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQD 213 (591)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~ 213 (591)
++...++.+..+.|+|.|... .....++|..|.+. |..+..+......+....+|.++..+..
T Consensus 129 ----------~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~------R~~~~~~~~~~~i~~~~~~~~ia~~~~~ 191 (599)
T PF06609_consen 129 ----------QNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKW------RGLGLAIASIPFIITTWISPLIAQLFAA 191 (599)
T ss_pred ----------CcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccch------hhhHhHHHHHHHHhhhcccHHHHHHhcc
Confidence 688899999999999977765 45566899999888 8877777666555666677777777776
Q ss_pred ccccchhHHHHHHHHHHHHHHHH
Q 007736 214 NLGREWGYGICACAIVFGLVVFL 236 (591)
Q Consensus 214 ~~g~~~~f~~~~~~~~~~~~~~~ 236 (591)
+.+|||.|++..+...++++..+
T Consensus 192 ~~~WRw~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 192 HSGWRWIFYIFIIWSGIALVLIF 214 (599)
T ss_pred CCCcchHHHHHHHHHHHHHHHHH
Confidence 77999999998877666654433
No 104
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.71 E-value=2.9e-15 Score=152.83 Aligned_cols=138 Identities=16% Similarity=0.163 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 007736 48 TLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRP 127 (591)
Q Consensus 48 ~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~ 127 (591)
.....-.+.+.+++.++++..+++++...+..+++++.++.|++.+|+ |+|+.+++++.++++++.+..=+..
T Consensus 28 ~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~lF~pAa~------ 100 (422)
T COG0738 28 ITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAALFWPAAS------ 100 (422)
T ss_pred HhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhhhhh------
Confidence 344556677888999999999999999999999999999999999998 9999999999999999988864422
Q ss_pred CCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhh
Q 007736 128 PKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTV 207 (591)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i 207 (591)
..++..++++.++.+.|.+......+++++.+.|++. -.+-+++......+|+.++|.+
T Consensus 101 ---------------~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~------a~~rlnl~q~fn~lGa~~gp~~ 159 (422)
T COG0738 101 ---------------SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPES------AAFRLNLAQAFNGLGAILGPLL 159 (422)
T ss_pred ---------------hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh------HHHHHHHHHHhhhhHHHHHHHH
Confidence 1688899999999999999999999999999999877 5666777788889999999999
Q ss_pred hhhhcc
Q 007736 208 LVYIQD 213 (591)
Q Consensus 208 ~~~l~~ 213 (591)
++++..
T Consensus 160 g~~lil 165 (422)
T COG0738 160 GSSLIL 165 (422)
T ss_pred HHHHHH
Confidence 998876
No 105
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.71 E-value=7.9e-16 Score=162.10 Aligned_cols=141 Identities=7% Similarity=-0.022 Sum_probs=129.4
Q ss_pred HHHHHHHHhhhhcCCChHH-HHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 007736 51 IAVNLVTYLTGTMHLGNAS-AANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPK 129 (591)
Q Consensus 51 ~~~~l~~yl~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~ 129 (591)
..++..+|+.+++|++.++ .+.+.+.+..++.++.+++|+++||+ |.|+++.++.+...+..++++++
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl~t~L~~fa---------- 112 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVCVWLLLLLG---------- 112 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHH----------
Confidence 3556677899999999999 99999999999999999999999997 99999999999999999999987
Q ss_pred CCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhh
Q 007736 130 CNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLV 209 (591)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~ 209 (591)
.++..+.+.|++.|++.|+.. +...++..++|+++ |+++.++.+.+..+|.++++++++
T Consensus 113 --------------~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kE------R~ratsi~~sg~~vG~~Ia~~L~q 171 (511)
T TIGR00806 113 --------------TSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSR------YQRAAAYSRAAVLLGVFLSSVLGQ 171 (511)
T ss_pred --------------HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 588899999999999999999 99999999999999 999999999999999999999999
Q ss_pred hhccccccchhHHHH
Q 007736 210 YIQDNLGREWGYGIC 224 (591)
Q Consensus 210 ~l~~~~g~~~~f~~~ 224 (591)
+ ...+||+.-+.+.
T Consensus 172 l-l~s~gWr~y~~Ln 185 (511)
T TIGR00806 172 L-LVTLGWISYSTLN 185 (511)
T ss_pred H-HHhcCchhHHHHH
Confidence 9 4567988765544
No 106
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.69 E-value=1.9e-15 Score=158.40 Aligned_cols=394 Identities=9% Similarity=0.014 Sum_probs=218.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQA 110 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~ 110 (591)
+++.|......++...++-...++.+.++++..|++.+++|.+.+...+...+.+++.|.++||+ |.||-+++.+.+..
T Consensus 6 ~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~ 84 (412)
T PF01306_consen 6 NKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILL 84 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHH
Confidence 34566667777777777777889999999998999999999999999999999999999999997 87766554443332
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhh
Q 007736 111 AGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFF 190 (591)
Q Consensus 111 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 190 (591)
+.......-...|.+ ..-+.++.++.++..+.......+.. |.+-++.++ +.+-=+
T Consensus 85 ~l~~pff~~v~~pll--------------------~~n~~lg~iig~i~l~~~f~~~~~~~-Ea~~er~sr---~~~feY 140 (412)
T PF01306_consen 85 LLFGPFFIYVFGPLL--------------------QSNFWLGAIIGGIYLGLVFNAGVPLS-EAYAERVSR---RNGFEY 140 (412)
T ss_dssp HTCHHHHHHTHHHHH--------------------HTT-HHHHHHTTTTTTTTTTTHHHHH-HHHHHHHHH---HHSS-H
T ss_pred HHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHHHHcccchHH-HHHHHHHHH---HhcCCc
Confidence 221111111000100 00122233333333333332222222 332222221 123334
Q ss_pred hhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccCC
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLDL 270 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (591)
|-..+.+.+|.+++..++|.+.+ .+-+..||+.....++..++++..+++.+++.+..+.
T Consensus 141 G~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~------------------- 200 (412)
T PF01306_consen 141 GRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADA------------------- 200 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTT-------------------
T ss_pred chHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcc-------------------
Confidence 55677788999999999998876 3455677776654444433333333221111100000
Q ss_pred CCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHHHHHHH-
Q 007736 271 PSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPIWATT- 349 (591)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 349 (591)
+ . .+.+..+..+. .+..+.|+++....+....
T Consensus 201 -------------~------~---~~~~~~~~~~~-------------------------~~l~k~~~fw~~~l~v~g~~ 233 (412)
T PF01306_consen 201 -------------L------G---AKKDKVSLKDV-------------------------LSLFKMRNFWFFVLFVIGVA 233 (412)
T ss_dssp -------------S------S---S------HHHH-------------------------HHHTTSHHHHHHHHHHHHHH
T ss_pred -------------c------c---cCCCCCcHHHH-------------------------HHHhcchhHHHHHHHHHHHH
Confidence 0 0 00000000000 0011123333333333333
Q ss_pred HHHHHHhccccceeeeeeccccccccccccccccccccchh---hhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHH
Q 007736 350 IIFWTVYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVG---SILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVG 426 (591)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g 426 (591)
..+..+.+|.+.++.... +.. +......+.++.+ .-.+...+..+++ +| .++++.+.++
T Consensus 234 ~~Y~vfdqqf~~y~~~~f---~~~----~~g~~~~G~l~s~~v~~E~~~m~~~p~li----~r-------ig~k~~Llla 295 (412)
T PF01306_consen 234 AIYDVFDQQFPIYFASFF---QSA----GQGNQMYGYLWSVQVFLEALMMFFSPWLI----NR-------IGAKNLLLLA 295 (412)
T ss_dssp HHHHHHHHHHHHHHHHTS---SSH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HH-------H-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh---ccc----ccChhHHhHHHHHHHHHHHHHHHHHHHHH----Hh-------cChHhHHHHH
Confidence 344444445444333221 100 1111222222222 2222223333334 44 3444678888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHH
Q 007736 427 LVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLF 506 (591)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~ 506 (591)
..++++-.+.+++. .+++++++.-.+.++-..+......-|+.+.+|++..++...+.
T Consensus 296 g~i~~iRi~~~~~~----------------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~ 353 (412)
T PF01306_consen 296 GVIMAIRIIGSGFA----------------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVG 353 (412)
T ss_dssp HHHHHHHHHHHHT------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHH
T ss_pred HHHHHHHHHHHhhh----------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHH
Confidence 88888888877764 35667777889999999999999999999999999999999885
Q ss_pred -HHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 007736 507 -LSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWYV 570 (591)
Q Consensus 507 -~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~ 570 (591)
++..+++..+.+.+.|.+.|..| .+..|++.+++.++..++..+..++.+
T Consensus 354 ~~~~~~~~~~i~s~~~G~lyd~~G--------------~~~tylimg~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 354 FQFAKQIGIIILSPLAGYLYDRIG--------------FQHTYLIMGLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp HTTTHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred HHHHHHHHHHHHhhhHHhhHhhcC--------------cHHHHHHHHHHHHHHHHHheeeecCCC
Confidence 58889999999999999987543 445788888887777776666655433
No 107
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.67 E-value=3.3e-15 Score=162.81 Aligned_cols=419 Identities=13% Similarity=0.060 Sum_probs=250.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 35 AMILGGEACERLTTLGIAVN---LVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~---l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
|.+.++.|+.+...+++..- +-..++++++.+..+++|+.++......+..++.+.+.||+ |.|.+.+.|.++..+
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHH
Confidence 66777777777777766543 34566788999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHH-HHHHHhccccccccccccccCCCCCCChhhhhccchhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIA-LYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFF 190 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 190 (591)
|.++.+++ .+++.+++. -++.|+|.|..+.+...++..+|+++ |+.+.
T Consensus 124 g~~lssF~------------------------~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kk-------R~lA~ 172 (509)
T KOG2504|consen 124 GLLLSSFA------------------------TSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKK-------RALAT 172 (509)
T ss_pred HHHHHHHH------------------------hhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHH-------HHHHH
Confidence 99999998 477777665 45568999999999888888777654 89999
Q ss_pred hhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccCC
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLDL 270 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (591)
|+...+..+|..+-|.+.-++.+.+|||..+++.....+-.++.....++.....++. .. ++. +. ... .
T Consensus 173 Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~-~~-~~~-~~-------~~~-~ 241 (509)
T KOG2504|consen 173 GIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPN-EE-KDL-RN-------SAA-S 241 (509)
T ss_pred hhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch-hh-hhh-cc-------ccc-c
Confidence 9988899999999999999999999999999887766554444444544432222222 00 000 00 000 0
Q ss_pred CCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCcccccccccccc------Cc--cchhHHHHHHHHH
Q 007736 271 PSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNL------AT--LTDVEEVKMVIRM 342 (591)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~--~~~~~~~~~~~~~ 342 (591)
.+......+.... .++.. +.+ .......... .....|+. .. +.+...-+.++..
T Consensus 242 ~~~~~~~~~~~~~----~~~~~---~~~-~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~ 303 (509)
T KOG2504|consen 242 VESTPKPVELRIS----ERDSG---LKK-LSLSNLATLK----------RGPDKWRNSPLQAFLSMLDLSLLKDPKFLLL 303 (509)
T ss_pred ccccccccccccc----cCCCC---CCc-ccccchhhhh----------hCCccccccchhhhhhhhhHHHHcCchHHHH
Confidence 0000000000000 00000 000 0000000000 00111110 00 0000011111111
Q ss_pred HHHH-HHHHHHHHHhccccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchh
Q 007736 343 LPIW-ATTIIFWTVYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQ 421 (591)
Q Consensus 343 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~ 421 (591)
..-. +..+.+...+...+.+.. ....+ .-..+.+.++..+...++.++.+++.++-. .....
T Consensus 304 ~~~~~~~~~g~~~p~~~l~~~~~--~~g~~------~~~aa~l~Siigi~~i~gRi~~G~laD~~~---------~~~~~ 366 (509)
T KOG2504|consen 304 ALSNLFAYLGFNVPFVYLPSYAK--SLGLS------SNDAAFLLSIIGVSDIIGRIILGLLADKPG---------IRALV 366 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh--hcCCC------hhhhHHHHHHHHHhhhhhhhhhhhhcCccc---------cchHH
Confidence 1111 111111111111111111 11111 112334444555555666666666664322 11223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHH
Q 007736 422 RIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTM 501 (591)
Q Consensus 422 ~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~ 501 (591)
...+++++++++.++.... .+++.++...+++|+..+.........+.+.++.+.-..
T Consensus 367 ~~~~~ll~~gl~~~~~p~~----------------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~ 424 (509)
T KOG2504|consen 367 LFLLTLLIAGLARLFLPFA----------------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSN 424 (509)
T ss_pred HHHHHHHHHHHHHHHHHHh----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcch
Confidence 4555666666665444443 245566667778888887777666667889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 007736 502 STGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFA 566 (591)
Q Consensus 502 ~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~ 566 (591)
+.|+..+...++..+|+-+.|++.+..+ +++..|+..++..+++..+.++..
T Consensus 425 a~Gl~l~~~gi~~l~gpPiag~~~d~tg-------------~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 425 AYGLLLLFQGIGALVGPPIAGLLYDITG-------------NYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHhHHHHHcCcccceeeeeccC-------------CeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999999999998876542 244566667776666665444433
No 108
>PRK11462 putative transporter; Provisional
Probab=99.67 E-value=1.7e-14 Score=156.90 Aligned_cols=155 Identities=12% Similarity=0.118 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhh---chhHHHHH-HHHHHHH
Q 007736 35 AMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTF---LGRYLTIA-IFATVQA 110 (591)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~---~Grk~~~~-~~~~~~~ 110 (591)
+.--++.+..+..+..+..++..|+++.+|+++..++.+..+.-+.-++.-|+.|+++||. +||||-.+ ++.+..+
T Consensus 12 ~~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~ 91 (460)
T PRK11462 12 IGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFG 91 (460)
T ss_pred HhhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHH
Confidence 3334556666777777788999999999999999999999999999999999999999972 48876554 5656777
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhh
Q 007736 111 AGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFF 190 (591)
Q Consensus 111 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 190 (591)
++.+++... |..+ .......+.+.-++..++......+..++.+|+.++.+. |.+..
T Consensus 92 i~~~llf~~---p~~s---------------~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~e-----Rt~l~ 148 (460)
T PRK11462 92 IVCVLAYST---PDLS---------------MNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQ-----RISLQ 148 (460)
T ss_pred HHHHHHHhC---CCCC---------------cchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHH-----HHHHH
Confidence 776665543 2111 012244455566666788888888889999999874332 99999
Q ss_pred hhhHHHHhhchhhhhhhhhhhc
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQ 212 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~ 212 (591)
++...+.++|+.+++.+...+.
T Consensus 149 s~r~~~~~iG~~~~~~~~~plv 170 (460)
T PRK11462 149 SWRFVLATAGGMLSTVLMMPLV 170 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888877755443
No 109
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.67 E-value=3.4e-14 Score=153.48 Aligned_cols=152 Identities=13% Similarity=0.050 Sum_probs=127.5
Q ss_pred hhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcc
Q 007736 59 LTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSC 138 (591)
Q Consensus 59 l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~ 138 (591)
+.++.++...+.+.+.+++.+++.++.+++|+|.||+ .-.+.+....++..+-.++.+..
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~------------------- 131 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAV------------------- 131 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 3467788889999999999999999999999999998 86666666666555555444443
Q ss_pred cccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhh------c
Q 007736 139 IQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYI------Q 212 (591)
Q Consensus 139 ~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l------~ 212 (591)
++.+.+++.|+++|+..++.+|....+++.++.+++ |+.-+++++.+..+|+++|.++...+ .
T Consensus 132 -----~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~ 200 (495)
T KOG2533|consen 132 -----HSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSG 200 (495)
T ss_pred -----hhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCC
Confidence 689999999999999999999999999999999999 99999999999999999999998875 3
Q ss_pred cccccchhHHHHHHHHHHHHHHHHhcCCc
Q 007736 213 DNLGREWGYGICACAIVFGLVVFLSGTRR 241 (591)
Q Consensus 213 ~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 241 (591)
...||||.|++.+++.++..++.++..|.
T Consensus 201 ~~~gW~~~FiI~G~i~~~~gi~~f~~lp~ 229 (495)
T KOG2533|consen 201 GLAGWRWLFIIEGVITLVLGIVVFFFLPD 229 (495)
T ss_pred CcCCceeehhHHHHHHHHHHheEEEEecC
Confidence 35689999999987766666555555554
No 110
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.66 E-value=3.8e-14 Score=141.87 Aligned_cols=425 Identities=14% Similarity=0.083 Sum_probs=237.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHh
Q 007736 41 EACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTIST 120 (591)
Q Consensus 41 ~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~ 120 (591)
..............+..-+....+.+..+..++......+..+++...|.++|++ |||+...+...+..+...+-+.+
T Consensus 86 gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~s- 163 (528)
T KOG0253|consen 86 GWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGAS- 163 (528)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcCC-
Confidence 3444444555566666667777888888999999999999999999999999998 99999998877777766666554
Q ss_pred hcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhc
Q 007736 121 IIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIG 200 (591)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig 200 (591)
+++..+.+.|.+.++|.|+ .|...++-.|..|... |....-.. ....+|
T Consensus 164 -----------------------pnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~------r~~~~V~~-~~waig 212 (528)
T KOG0253|consen 164 -----------------------PNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH------RWLLTVMS-FFWAIG 212 (528)
T ss_pred -----------------------CCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC------CCcchhHH-HHHHHH
Confidence 5888999999999999999 7888899999989887 77666555 566788
Q ss_pred hhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCce-eeccCCCChhhHHHHHHHHHHhhcccCCCCCCCCccc
Q 007736 201 SLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRY-RFKKLVGSPLTQIASVFVVAWRKRHLDLPSDPSMFFN 279 (591)
Q Consensus 201 ~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (591)
.++...+.=.....+||||..........+..... +..++. +..-.++++.+. ...+....|--+.+.|-.......
T Consensus 213 ~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~-~w~~ESpRf~~~~G~~~kA-letL~kiArmNg~qlplgvl~~s~ 290 (528)
T KOG0253|consen 213 QVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFL-VWVYESPRFYLAKGDDYKA-LETLHKIARMNGKQLPLGVLESSA 290 (528)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHH-hhcccCcchhhhcCChHHH-HHHHHHHHHhcCCCCCcceeeeeh
Confidence 88887777666778899998766664333332222 222222 222223333332 233444444444555433222222
Q ss_pred ccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHHHHH-HHHHHHHHhcc
Q 007736 280 IDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPIWA-TTIIFWTVYAQ 358 (591)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 358 (591)
+++.|++ .+-+|..+...+++. ...--++..++ . +|+.+-....|+ ....+|...-.
T Consensus 291 ~~~~e~e-------------~~~~~~~~~~a~ke~------rg~~~nLlsp~--l-rkttlllw~iwfgnafsyyg~VLl 348 (528)
T KOG0253|consen 291 IDRQEQE-------------ESDLDDSKSSAAKEV------RGGTTNLLSPK--L-RKTTLLLWRIWFGNAFSYYGSVLL 348 (528)
T ss_pred hhhhhhh-------------hhchhhhhhcccccc------ccchHhhcChH--H-HHHHHHHHHHHHhhHHHHHHHHHH
Confidence 1111100 000111111100000 00001111111 1 222222222222 22222221111
Q ss_pred ccceeee----------eecccccccc-ccccc----cccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHH
Q 007736 359 MTTFSVS----------QATTMNRHIG-SFEIP----GASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRI 423 (591)
Q Consensus 359 ~~~~~~~----------~~~~~~~~l~-~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i 423 (591)
....++. .....+.... .+... ..++.+ +.-+-+..+..++++|++|| +.|
T Consensus 349 ttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllits---laefPGlLIt~~iverlGRK-----------kTM 414 (528)
T KOG0253|consen 349 TTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITS---LAEFPGLLITGVIVERLGRK-----------KTM 414 (528)
T ss_pred HHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHH---HhhCCchhHHHHHHHHhcch-----------hHH
Confidence 1000000 0000010000 00000 000111 11111122344455555565 447
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHH
Q 007736 424 GVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMST 503 (591)
Q Consensus 424 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~ 503 (591)
...++++++..+....+. ......+..+..-......+.+.|.|..|++|...|+++.
T Consensus 415 al~l~~f~iflfll~~c~----------------------~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgv 472 (528)
T KOG0253|consen 415 ALSLILFGIFLFLLTTCK----------------------TRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGV 472 (528)
T ss_pred HHHHHHHHHHHHHHHHhc----------------------CcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcch
Confidence 777777766665555442 1111122233444444455677899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Q 007736 504 GLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWYVYKDK 574 (591)
Q Consensus 504 gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~~~ 574 (591)
|+-.....+|+++.|.+. ...... ....-.+.++.++++.+...++-.++|+|+.
T Consensus 473 GtcSsmaRIggI~~p~iA-~~~e~s---------------~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 473 GTCSSMARIGGIFSPVIA-MRAELS---------------TSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred hhhhhHHhhhhhhhhHHH-HHhccc---------------eeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 999999999999999987 443221 1123456777778888777777778887753
No 111
>PTZ00207 hypothetical protein; Provisional
Probab=99.66 E-value=1.6e-13 Score=151.12 Aligned_cols=156 Identities=13% Similarity=0.035 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 007736 48 TLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRP 127 (591)
Q Consensus 48 ~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~ 127 (591)
.|++. .....+++++|++..+.+++.++.. ...++.++.|+++||+ |||+++.++.+++.++.++++++..-
T Consensus 43 ~y~fs-v~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~-G~R~vllig~ll~~iG~ll~ala~~~----- 114 (591)
T PTZ00207 43 MYAFN-LISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYL-GPRPIFVLSMTVFCLGTLLFALTFQE----- 114 (591)
T ss_pred HHHHH-HHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHhcc-----
Confidence 34433 4455678899999999999987644 3446777899999998 99999999999999999999886210
Q ss_pred CCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhh-hhh
Q 007736 128 PKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLA-AVT 206 (591)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~-~p~ 206 (591)
....+.+.+++.|++.|+|.+...+.....+.++|| ++ |+++.++...+.++|+++ +++
T Consensus 115 -------------~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~------RG~a~Gi~~~~~gLGsaI~~~l 174 (591)
T PTZ00207 115 -------------VIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SN------RGAVVAIMKTFTGLGSAILGSI 174 (591)
T ss_pred -------------cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hh------hHHHHHHHHHHHHHHHHHHHHH
Confidence 001378889999999999999888888889999997 56 999999999999999975 555
Q ss_pred hhhhhccccccchhHHHHHHHHHHHHH
Q 007736 207 VLVYIQDNLGREWGYGICACAIVFGLV 233 (591)
Q Consensus 207 i~~~l~~~~g~~~~f~~~~~~~~~~~~ 233 (591)
..+++. .+|+..|++.++..++..+
T Consensus 175 ~~~l~~--~~~~~~fl~l~vl~~vv~l 199 (591)
T PTZ00207 175 QLAFFS--DNTSAYFFFLMSFALVVGI 199 (591)
T ss_pred HHHHHH--HhHHHHHHHHHHHHHHHHH
Confidence 555554 3577677666654444333
No 112
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.66 E-value=2.2e-14 Score=144.37 Aligned_cols=346 Identities=16% Similarity=0.177 Sum_probs=232.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHH
Q 007736 34 AAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGV 113 (591)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 113 (591)
+..+.+..+=-+...-++- .+...+.+++|+|.++++.+.++..++..+.+++..+|+.|+ |.+|.+..++++.++|.
T Consensus 14 i~gIvlia~NLR~~itsvg-PLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~G~ 91 (395)
T COG2807 14 LAGIVLIAFNLRPAITSVG-PLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAAGI 91 (395)
T ss_pred HHHHHHHHhccchhhhhhh-hhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHHHH
Confidence 3333333333344433333 344567889999999999999999999999999999999997 99999999999999998
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhh
Q 007736 114 TILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWF 193 (591)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 193 (591)
.+=... +...++.+-.+.|.|.+......++++-+.||++. +..+++|
T Consensus 92 ~iR~~~-------------------------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~-------~~mtglY 139 (395)
T COG2807 92 LIRSLG-------------------------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRV-------GLMTGLY 139 (395)
T ss_pred HHHhcc-------------------------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccch-------hhHHhHH
Confidence 887763 66778888889999999999999999999999875 8899999
Q ss_pred HHHHhhchhhhhhhhhhhcccc-ccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccCCCC
Q 007736 194 FFFISIGSLAAVTVLVYIQDNL-GREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLDLPS 272 (591)
Q Consensus 194 ~~~~~ig~~~~p~i~~~l~~~~-g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (591)
....++|+.+++.+...+.++. ||+..+.+=++..+++++.++....+.+ .+..+..
T Consensus 140 s~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~r~~--~~~~~~~-------------------- 197 (395)
T COG2807 140 STSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQALREQ--AASIATK-------------------- 197 (395)
T ss_pred HHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhccccc--ccccccc--------------------
Confidence 9999999999999999888877 7999987777766666666554422111 1100000
Q ss_pred CCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHHHHHHHHHH
Q 007736 273 DPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPIWATTIIF 352 (591)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (591)
+++..+-| ++...+...+..-.-..++
T Consensus 198 ---------------------------------------------~~~~~~vw--------~~~~aW~vtLfmGlqS~~~ 224 (395)
T COG2807 198 ---------------------------------------------LVSVRKVW--------RSPLAWQVTLFMGLQSLLY 224 (395)
T ss_pred ---------------------------------------------cccccccc--------cCchhHHHHHHHHhhHHHH
Confidence 00011122 1222333344445667778
Q ss_pred HHHhccccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHH
Q 007736 353 WTVYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIF 432 (591)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~ 432 (591)
|+.+.+++.++..+. ++.+ .++.+.++..+..+....+...+. +|..+ .+........++.+
T Consensus 225 Y~~~~WLP~ili~~G--~sa~------~aG~llsl~~l~~~~~~ll~P~la----~R~~n------~r~~~~~~~~~~l~ 286 (395)
T COG2807 225 YIVIGWLPAILIDRG--LSAA------EAGSLLSLMQLAQLPTALLIPLLA----RRSKN------QRPLVVLALLLMLV 286 (395)
T ss_pred HHHHHHHHHHHHHcC--CCHH------HhhhHHHHHHHHHHHHHHHHHHHH----HHhcc------cchHHHHHHHHHHH
Confidence 888888888765542 2211 122222222222223332333333 33211 11334555566666
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCc-chhHHHHHHHHHHHH
Q 007736 433 AMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPK-GMKTMSTGLFLSTLS 511 (591)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~-~~rg~~~gl~~~~~~ 511 (591)
+++-+.+.. .+..++| .+++|+|.+.++|....++....++ +..+.-+|+.+....
T Consensus 287 G~~G~~~~P-------------------~~~~~lw----~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GY 343 (395)
T COG2807 287 GLVGLLLAP-------------------GQLPILW----ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGY 343 (395)
T ss_pred HHHHHHHhh-------------------hhHHHHH----HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhH
Confidence 666655532 1223333 4788888888888877777776644 555777888888888
Q ss_pred HHHHHHHHHHHHhhcccC
Q 007736 512 LGFFVSSLLVSLVHKVTG 529 (591)
Q Consensus 512 lg~~lg~~l~~~i~~~~~ 529 (591)
+-..+||.++|+++|..|
T Consensus 344 llAa~GP~l~G~lhDa~g 361 (395)
T COG2807 344 LLAAFGPWLFGFLHDATG 361 (395)
T ss_pred HHHhhhhhhHhHHHHhcC
Confidence 888899999999998874
No 113
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.65 E-value=1.3e-13 Score=145.86 Aligned_cols=375 Identities=13% Similarity=0.117 Sum_probs=232.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhh---chhHH-HHHHHH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTF---LGRYL-TIAIFA 106 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~---~Grk~-~~~~~~ 106 (591)
.+.-..--...+..+..+-.+..++..|.++.+|+++..+|.+..+.-+.=++.-|+.|.++||. +||+| -++++.
T Consensus 11 ~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ 90 (467)
T COG2211 11 LKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGA 90 (467)
T ss_pred HHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHh
Confidence 34445556667777788888899999999999999999999999999999999999999999984 36654 566677
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhcc
Q 007736 107 TVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQM 186 (591)
Q Consensus 107 ~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 186 (591)
+.+++...++..+.+ .+ ...+....++.-.+.+++......+..++.+++.++.+. |
T Consensus 91 ip~~i~~~l~F~~p~---~~---------------~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~E-----R 147 (467)
T COG2211 91 IPFAIVAVLLFITPD---FS---------------MTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQE-----R 147 (467)
T ss_pred HHHHHHHHHHHcCCC---cc---------------cCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHH-----H
Confidence 788888877776521 10 013555566777888899999999999999999864432 9
Q ss_pred chhhhhhHHHHhhchhhhhhhhhhhccc-------cccchhHHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHH
Q 007736 187 TNFFNWFFFFISIGSLAAVTVLVYIQDN-------LGREWGYGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVF 259 (591)
Q Consensus 187 ~~~~~~~~~~~~ig~~~~p~i~~~l~~~-------~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (591)
.+..++-..+.++|..+...+.+.+... .||+..-.+..+..++..++.++..+|...+....++
T Consensus 148 ~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~-------- 219 (467)
T COG2211 148 ASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKT-------- 219 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcc--------
Confidence 9999999899999987776666555432 3455444433333333333333322221110000000
Q ss_pred HHHHhhcccCCCCCCCCcccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHH
Q 007736 260 VVAWRKRHLDLPSDPSMFFNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMV 339 (591)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (591)
+....+.+... .....|.+
T Consensus 220 -------------------------------------~~~~~~~~~~~------------------------~~~~Nrp~ 238 (467)
T COG2211 220 -------------------------------------GVKLKLKDSFL------------------------LIFKNRPL 238 (467)
T ss_pred -------------------------------------cccccHHHHHH------------------------HHHccchH
Confidence 00000000000 00112223
Q ss_pred HHHHHHHHHHHHHHHHhccccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCc
Q 007736 340 IRMLPIWATTIIFWTVYAQMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTP 419 (591)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~ 419 (591)
+..+...++..+..-..+....++.....+.+ +..+...........+++.++..++. +|.+ +
T Consensus 239 ~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~------~l~~~~~~~~~~~~~l~~~~~~p~L~----~~~g-------k 301 (467)
T COG2211 239 LLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDP------ELFAYLLLLASGAGLLIGLILWPRLV----KKFG-------K 301 (467)
T ss_pred HHHHHHHHHHHHHHHHHhhhhheeEEEEcCCh------HHHHHHHHHHHHHHHHHHHHhHHHHH----HHhc-------h
Confidence 33333333333332332333334433322211 11122222222222333344454444 4432 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCc---
Q 007736 420 LQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPK--- 496 (591)
Q Consensus 420 ~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~--- 496 (591)
++...+|.++.+++.+.+.+. ...+.+.+++..++.++|.+...+..++++.|.+.-
T Consensus 302 k~~~~~~~~~~~i~~~~~~f~--------------------~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~ 361 (467)
T COG2211 302 KKLFLIGLLLLAVGYLLLYFT--------------------PAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEW 361 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHhh--------------------cCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHH
Confidence 366888888888888888775 223556666777888999999999889888887643
Q ss_pred ----chhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccc
Q 007736 497 ----GMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADN 538 (591)
Q Consensus 497 ----~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~ 538 (591)
+..|...|.+.+++-+|..++..+.+++.... |+.++.
T Consensus 362 ~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~----Gyv~~~ 403 (467)
T COG2211 362 KTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAI----GYVPNV 403 (467)
T ss_pred HhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc----CCCCCc
Confidence 55688899999999999999999999998775 455543
No 114
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.56 E-value=4.3e-14 Score=145.11 Aligned_cols=182 Identities=16% Similarity=0.179 Sum_probs=147.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhc-hhHHHHHHHH-HH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFL-GRYLTIAIFA-TV 108 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~-Grk~~~~~~~-~~ 108 (591)
.+.+|.+.+.+++.....|++..|.|.|+.|..|+|..++++..+.|-+++..+++++||+|||++ |||....+.. +.
T Consensus 251 Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~ 330 (448)
T COG2271 251 NKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLL 330 (448)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHH
Confidence 368999999999999999999999999999999999999999999999999999999999999976 6666554433 33
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccch
Q 007736 109 QAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTN 188 (591)
Q Consensus 109 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 188 (591)
..++.+....+ | ..+..+..+..+.+|+..-+....+-....|..|++. -|+
T Consensus 331 i~~~~~~~w~~---~-------------------~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A------aGt 382 (448)
T COG2271 331 ITASLVLYWLA---P-------------------NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA------AGT 382 (448)
T ss_pred HHHHHHHHHcC---C-------------------CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh------ccc
Confidence 33344444433 1 1356677777777887776666666677889999998 899
Q ss_pred hhhhhHHHHhh-chhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCC
Q 007736 189 FFNWFFFFISI-GSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTR 240 (591)
Q Consensus 189 ~~~~~~~~~~i-g~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 240 (591)
+.|+..++..+ |+.++....|++.|.+||...|++..++.+++.+.+....+
T Consensus 383 A~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 383 ATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred hhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 99999999888 99999999999999999999999888777777666555443
No 115
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.50 E-value=5.9e-14 Score=135.79 Aligned_cols=135 Identities=16% Similarity=0.276 Sum_probs=114.6
Q ss_pred HHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 007736 55 LVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNH 134 (591)
Q Consensus 55 l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~ 134 (591)
+-.+...+.+++.++..++.+.|.+-..+.+.++|++.||.+|-|..-++-+.+..+|.++.+..-
T Consensus 66 lq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Gg-------------- 131 (459)
T KOG4686|consen 66 LQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGG-------------- 131 (459)
T ss_pred hhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhch--------------
Confidence 344556667777788889999999999999999999999987988877777777888888777642
Q ss_pred CCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccc
Q 007736 135 GQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDN 214 (591)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~ 214 (591)
..+.++....+|++.|+|.-......+++..-+|..++ .+-++|++.....+|+.+-..+.+++.+.
T Consensus 132 -------i~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln~vfGlqlSvAR~GstvNf~lm~~ly~~ 198 (459)
T KOG4686|consen 132 -------ISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LNFVFGLQLSVARLGSTVNFLLMPFLYDT 198 (459)
T ss_pred -------HHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc------ccchhhHHHHHHHhhceeeeeecHHHHHH
Confidence 22688899999999999999998999999999999999 99999999999999999888888888765
Q ss_pred cc
Q 007736 215 LG 216 (591)
Q Consensus 215 ~g 216 (591)
.+
T Consensus 199 ~~ 200 (459)
T KOG4686|consen 199 MG 200 (459)
T ss_pred HH
Confidence 44
No 116
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.48 E-value=4.7e-13 Score=146.98 Aligned_cols=178 Identities=12% Similarity=0.089 Sum_probs=129.2
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHH
Q 007736 30 GWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQ 109 (591)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~ 109 (591)
+++.........++....+|++..++|.|+++.+|++..+..++.....++..++.++.|+++||+ |||+++.++.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~ 326 (490)
T PRK10642 248 HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVAL 326 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 344444444455667788999999999999988999988888888888889999999999999998 9999988877654
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchh
Q 007736 110 AAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNF 189 (591)
Q Consensus 110 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 189 (591)
.++...+..... . .+...+++++++.+++.+...+....++.|.+|++. |+++
T Consensus 327 ~~~~~~~~~~~~-~--------------------~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~------Rg~~ 379 (490)
T PRK10642 327 FVLAIPAFILIN-S--------------------NVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI------RYSA 379 (490)
T ss_pred HHHHHHHHHHHh-C--------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc------chHH
Confidence 443333222110 0 245566777888877766666667788889999999 9999
Q ss_pred hhhhHHHHhhchhhhhhhhhhhccccc-cchhHHHHHHHHHHHHHHH
Q 007736 190 FNWFFFFISIGSLAAVTVLVYIQDNLG-REWGYGICACAIVFGLVVF 235 (591)
Q Consensus 190 ~~~~~~~~~ig~~~~p~i~~~l~~~~g-~~~~f~~~~~~~~~~~~~~ 235 (591)
.++.+....+++.++|.+.+++.+..+ |+.++++..+..+++++..
T Consensus 380 ~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~ 426 (490)
T PRK10642 380 LAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITG 426 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence 998444456677889999999887654 6666555444444444433
No 117
>PRK09952 shikimate transporter; Provisional
Probab=99.48 E-value=6.1e-13 Score=143.93 Aligned_cols=182 Identities=12% Similarity=0.017 Sum_probs=131.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHH
Q 007736 29 GGWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATV 108 (591)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~ 108 (591)
++++.........++....+|....+++.|+++.+|++......+.........++.++.|+++||+ ||||++..+.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~ 325 (438)
T PRK09952 247 RHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALI 325 (438)
T ss_pred HchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHH
Confidence 3444444444566777888999999999999999999987766666666777888999999999997 999998888766
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccch
Q 007736 109 QAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTN 188 (591)
Q Consensus 109 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 188 (591)
.+++...+....... .+...+.+..++.+++.+...+..+++++|.+|.+. |++
T Consensus 326 ~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~------r~t 379 (438)
T PRK09952 326 GTLSAFPFFMALEAQ--------------------SIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY------RYS 379 (438)
T ss_pred HHHHHHHHHHHHHcC--------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch------hHH
Confidence 555444333321000 133334445556677777777788899999999988 999
Q ss_pred hhhh-hHHHHhhchhhhhhhhhhhcccc--ccchhHHHHHHHHHHHHHHHHh
Q 007736 189 FFNW-FFFFISIGSLAAVTVLVYIQDNL--GREWGYGICACAIVFGLVVFLS 237 (591)
Q Consensus 189 ~~~~-~~~~~~ig~~~~p~i~~~l~~~~--g~~~~f~~~~~~~~~~~~~~~~ 237 (591)
+.++ ++.+..+|+.++|.+.+++.+.. +|...+.+.+++.+++.+..+.
T Consensus 380 g~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 431 (438)
T PRK09952 380 GAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALL 431 (438)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 9999 55556689999999999998744 4777777766666666555443
No 118
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.47 E-value=4.4e-13 Score=146.25 Aligned_cols=177 Identities=13% Similarity=0.021 Sum_probs=135.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
+.+|...+..++....+++...|+|.|+++.+|++..+.++..+.+.++..++.+++|+++||+ |||+.+.....+..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~ 336 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALI 336 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHH
Confidence 4678888888888888999999999999999999999999999999999999999999999998 999887665544443
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
+..+...... .+.....+.+++.|++..+..........|.+|++. |+++.|
T Consensus 337 ~~~~~~~~~~----------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~------~g~a~g 388 (467)
T PRK09556 337 IFTLGVYQHA----------------------TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA------IGVANG 388 (467)
T ss_pred HHHHHHHHhc----------------------CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh------HHHHHH
Confidence 3322222210 234445566666665443333333356669999998 999999
Q ss_pred hhHHHHhh-chhhhhhhhhhhcc------------ccccchhHHHHHHHHHHHHHHHHh
Q 007736 192 WFFFFISI-GSLAAVTVLVYIQD------------NLGREWGYGICACAIVFGLVVFLS 237 (591)
Q Consensus 192 ~~~~~~~i-g~~~~p~i~~~l~~------------~~g~~~~f~~~~~~~~~~~~~~~~ 237 (591)
+.+...++ |+.++|.+.|++.+ ..||+..|++..++.+++.+..+.
T Consensus 389 i~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 389 IKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred HHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 99999886 77999999999999 578999998887776666555443
No 119
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.46 E-value=1.8e-12 Score=138.28 Aligned_cols=176 Identities=13% Similarity=0.083 Sum_probs=132.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHH
Q 007736 30 GWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQ 109 (591)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~ 109 (591)
+++..+..+...++....++....++|.|+++++|++..+.+.+.+...++..++.++.|+++||+ |||+.+..+....
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~ 292 (393)
T PRK15011 214 NRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAG 292 (393)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHH
Confidence 334444444444555556666677899999999999999999888887788888999999999998 9999887776555
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchh
Q 007736 110 AAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNF 189 (591)
Q Consensus 110 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 189 (591)
.+........ .+...+.+.+++.+++.+...+....+..|.+|+ + |+++
T Consensus 293 ~~~~~~~~~~------------------------~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~------~g~~ 341 (393)
T PRK15011 293 VCFYAGMLMA------------------------HSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-Q------AGSA 341 (393)
T ss_pred HHHHHHHHHH------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-C------cchH
Confidence 5443333322 3455556677777766666556666777888874 5 7899
Q ss_pred hhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHh
Q 007736 190 FNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLS 237 (591)
Q Consensus 190 ~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 237 (591)
.++++...++|..++|.++|.+.+.+||+..|++..+..+++++..+.
T Consensus 342 ~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 342 TTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 999888899999999999999999999999998877766666555443
No 120
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.45 E-value=3.7e-11 Score=130.35 Aligned_cols=84 Identities=19% Similarity=0.215 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHH
Q 007736 468 LVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDF 547 (591)
Q Consensus 468 li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~ 547 (591)
+.+.-++.|+..+..++..-++..+..|++..+...|++.++....+++||++.+.+.+.++ +....
T Consensus 383 f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg-------------~~r~g 449 (477)
T PF11700_consen 383 FWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG-------------SQRYG 449 (477)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------------CchhH
Confidence 34445688889999999999999999999999999999999999999999999999987653 22334
Q ss_pred HHHHHHHHHHHHHHHHH
Q 007736 548 YWLLAILSALNFVIYLA 564 (591)
Q Consensus 548 f~~~~~~~~v~~~~~~~ 564 (591)
+..+.++.+++.++++.
T Consensus 450 ~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 450 FLFLLVLFLIGLILLFF 466 (477)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 66667777777665543
No 121
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.42 E-value=3.6e-11 Score=124.51 Aligned_cols=391 Identities=10% Similarity=0.022 Sum_probs=220.1
Q ss_pred HHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 007736 48 TLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRP 127 (591)
Q Consensus 48 ~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~ 127 (591)
-|.-......|..+.++ +....-|..-+|.+.+.....++-|+.||+ |-|.+..++....++|..+=.++. .|.+++
T Consensus 60 qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir~iss-~p~v~~ 136 (480)
T KOG2563|consen 60 QWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIRLISS-LPFVPP 136 (480)
T ss_pred hheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHhhhcc-Cccccc
Confidence 34444455667777777 666677888889999999999999999997 999999999999999998877653 233322
Q ss_pred CCCCCCCCCcccccchhHHH--HHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhh
Q 007736 128 PKCNLNHGQSCIQASGMQLV--VLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAV 205 (591)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p 205 (591)
.++ ..+.+-.+.+...-.+......+.+.+|++++ |..+..+-.++..+|.+++.
T Consensus 137 -----------------~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q------ra~A~~~~v~~n~LGvavg~ 193 (480)
T KOG2563|consen 137 -----------------LFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ------RAIATVLGVMGNPLGVAVGF 193 (480)
T ss_pred -----------------cchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch------hhhhhhHHHhcchHHHHHHh
Confidence 333 66777777787777777777788888999999 99999998888888888887
Q ss_pred hhhhhhcccc------ccchh--HHHHHHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccCCCCCCCCc
Q 007736 206 TVLVYIQDNL------GREWG--YGICACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLDLPSDPSMF 277 (591)
Q Consensus 206 ~i~~~l~~~~------g~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (591)
++...+..+. .|... |+...++..+.+....+..++.++.||..+ +...
T Consensus 194 llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s---~~~~-------------------- 250 (480)
T KOG2563|consen 194 LLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSAS---QAAL-------------------- 250 (480)
T ss_pred hccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchh---Hhhh--------------------
Confidence 7776665443 34432 332222222222222333333222222111 0000
Q ss_pred ccccCCccccccccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHHHHHHHHHHHHHhc
Q 007736 278 FNIDDIPVEGKKTKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPIWATTIIFWTVYA 357 (591)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (591)
. ..++.... + +..++++.++.+...-.....++..++
T Consensus 251 ------------------~--~~~f~~si---------------~--------~~~~n~~F~il~~~ygi~~g~F~~l~~ 287 (480)
T KOG2563|consen 251 ------------------Q--DASFPKSI---------------K--------SCFKNRQFIILAICYGIGLGLFNSLST 287 (480)
T ss_pred ------------------h--cCcHHHHH---------------H--------HHHcCccHHHHHHHHhhhHHHHHHHHH
Confidence 0 00000000 0 001122222222223333333444333
Q ss_pred cccceeeeeeccccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHHHHHHH
Q 007736 358 QMTTFSVSQATTMNRHIGSFEIPGASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIFAMVAA 437 (591)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~ 437 (591)
.+....... +.+ +...+....+..+..+++..+.+.+.||..+ .+ ..+.+-.....++-.++
T Consensus 288 ~l~~~l~~s--gY~------~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~--------fk--~~~~v~~~~~~v~~~~l 349 (480)
T KOG2563|consen 288 LLNLALCPS--GYE------GVFAGYIGALMIVAGMLGALASGIIADKTKK--------FK--LTTLVLYLFALVGTLML 349 (480)
T ss_pred Hhhhccccc--cCC------ccccchhHHHHHHHHHHHHHHHHhhhhhhhh--------HH--HHHHHHHHHHHHHHHHH
Confidence 332111111 111 1122333444444445555555555543321 11 11223333333332222
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHH
Q 007736 438 ALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVS 517 (591)
Q Consensus 438 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg 517 (591)
..++. .....+++.....++|.......|...++..|..-|..-+++.|+.+...++-+++-
T Consensus 350 ~~~t~------------------~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~ 411 (480)
T KOG2563|consen 350 LTCTL------------------FLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVIL 411 (480)
T ss_pred HHhhc------------------cCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHH
Confidence 22210 123344455566777777777789999999999988889999999998877777777
Q ss_pred HHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHHHhhhcccccccc
Q 007736 518 SLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWYVYKDKRL 576 (591)
Q Consensus 518 ~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 576 (591)
.++.+...+..+ .++ +....-+.++..++++.++..++.+.+++...++
T Consensus 412 ~~~~~~~~~~~~-----~~~-----~~~~~~i~~~~~~~l~~~lva~~r~~y~R~~~e~ 460 (480)
T KOG2563|consen 412 VFIMGILAEDLG-----PPG-----NTFPANIFLTVSALLGAILVAFFRPDYRRLRAEA 460 (480)
T ss_pred HHHHHHHhhccC-----CCC-----CCccchhHhHHHHHHHHHHHhhhhhhHHhHhhhh
Confidence 777776654322 111 0111223455666666666777777666655443
No 122
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.42 E-value=1.3e-12 Score=137.77 Aligned_cols=169 Identities=20% Similarity=0.068 Sum_probs=132.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQA 110 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~ 110 (591)
++.++......++....++....++|.|+++.+|.+..+.+.+.....++..++.++.|+++||+ |||+.+.....+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~ 296 (394)
T TIGR00883 218 RKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLAA 296 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 34467777777888888888899999999888999999999999999999999999999999998 99998876554444
Q ss_pred HHHH-HHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchh
Q 007736 111 AGVT-ILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNF 189 (591)
Q Consensus 111 i~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 189 (591)
+... +...... + .+...+.+..++.+++.+...+...+++.|.+|+++ |+++
T Consensus 297 ~~~~~~~~~~~~-~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~~~~ 349 (394)
T TIGR00883 297 LLAVPLLMALLD-S--------------------GSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV------RYTG 349 (394)
T ss_pred HHHHHHHHHHhc-C--------------------CchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc------eeeE
Confidence 3332 2211100 0 244555666777888888888889999999999998 9999
Q ss_pred hhh-hHHHHhhchhhhhhhhhhhccccc-cchhHHHHHHH
Q 007736 190 FNW-FFFFISIGSLAAVTVLVYIQDNLG-REWGYGICACA 227 (591)
Q Consensus 190 ~~~-~~~~~~ig~~~~p~i~~~l~~~~g-~~~~f~~~~~~ 227 (591)
.++ ++....+|..++|.++|++.++.| |+..++...++
T Consensus 350 ~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~ 389 (394)
T TIGR00883 350 ASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAAL 389 (394)
T ss_pred eeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHH
Confidence 998 566677899999999999999888 87776655543
No 123
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.41 E-value=2.2e-12 Score=135.27 Aligned_cols=170 Identities=13% Similarity=0.107 Sum_probs=135.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
+..+......++..........+.+.|. +++|.+..+.+.+.+.+.++..++.++.|+++||+ |||+.+.++.++.++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~ 282 (377)
T TIGR00890 205 PQFWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAV 282 (377)
T ss_pred ccHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHH
Confidence 3455555555565555555666677775 56889998999999999999999999999999998 999999998888888
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
+.+++..... .+...+....++.+++.+...+..++++.|.+|+++ |++..+
T Consensus 283 ~~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~------~~~~~g 334 (377)
T TIGR00890 283 GMAAMLFIPM----------------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN------SAANYG 334 (377)
T ss_pred HHHHHHHccc----------------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh------hhhHhH
Confidence 8777665411 122234455667788888777778889999999998 999999
Q ss_pred hhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHH
Q 007736 192 WFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFG 231 (591)
Q Consensus 192 ~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~ 231 (591)
+++...++|..++|.+.|.+.+..||++.|.+.+++.+++
T Consensus 335 ~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 335 FLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 9999999999999999999999999999998877655544
No 124
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.41 E-value=1.5e-10 Score=119.61 Aligned_cols=345 Identities=16% Similarity=0.193 Sum_probs=203.5
Q ss_pred hhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhch-----hHH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 007736 60 TGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLG-----RYL-TIAIFATVQAAGVTILTISTIIPSLRPPKCNLN 133 (591)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~G-----rk~-~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 133 (591)
..+++++..-.+...+...+... ..+..|+.||++ + ||. -++.|..+++.+..+..++...- ..
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l--~~------ 76 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLL--AE------ 76 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHH--cc------
Confidence 45788888888888877776554 699999999997 6 443 44556667776666555543211 10
Q ss_pred CCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhcc
Q 007736 134 HGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQD 213 (591)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~ 213 (591)
+++.-............++.++.|+|.+....+..++++|..|+++ |+++.++.+.+.-+|.+++..+.+.+.+
T Consensus 77 ~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~------R~~~v~ivw~Mli~G~iv~ai~~g~lL~ 150 (403)
T PF03209_consen 77 SGQQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER------RPRVVAIVWVMLIVGIIVSAIVFGRLLD 150 (403)
T ss_pred cccccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh------hhhhHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 0011111111222334455666788888888888999999999999 9999999988999999999999998887
Q ss_pred ccccchhHHHH----HHHHHHHHHHHHhcCCceeeccCCCChhhHHHHHHHHHHhhcccCCCCCCCCcccccCCcccccc
Q 007736 214 NLGREWGYGIC----ACAIVFGLVVFLSGTRRYRFKKLVGSPLTQIASVFVVAWRKRHLDLPSDPSMFFNIDDIPVEGKK 289 (591)
Q Consensus 214 ~~g~~~~f~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (591)
.++-.-..-+. .+..++.++..+-..++.+...+ .
T Consensus 151 ~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~--~--------------------------------------- 189 (403)
T PF03209_consen 151 PFSPERLIQVIQGVALIALLLNLIALWGQEPRRSRRAA--A--------------------------------------- 189 (403)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccccc--C---------------------------------------
Confidence 77633332222 12222222222221111111100 0
Q ss_pred ccccCCCCcchhhhHHhhhccCCCCCccccccccccccCccchhHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeecc
Q 007736 290 TKQRLPHTKQFRFLDKAAIFKDSDMSNSTTVVINKWNLATLTDVEEVKMVIRMLPIWATTIIFWTVYAQMTTFSVSQATT 369 (591)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (591)
+++++.++.+..... ..+ ...+++ ...++.....+++....+-+|--.
T Consensus 190 -----~~~~~~~f~~a~~~~-------------------~~~--~~a~~f--~~fl~l~t~a~~~QD~iLEPygg~---- 237 (403)
T PF03209_consen 190 -----AERPRPPFREAWRQV-------------------WAS--PQARRF--FVFLFLGTLAFFMQDVILEPYGGE---- 237 (403)
T ss_pred -----CCCCCccHHHHHHHH-------------------HhC--CChhHH--HHHHHHHHHHHHhhHHHcCCchhH----
Confidence 000001111110000 000 011222 122233333333333222221111
Q ss_pred ccccccccccc---cccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007736 370 MNRHIGSFEIP---GASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLR 446 (591)
Q Consensus 370 ~~~~l~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~ 446 (591)
+ ++++ +..++..-..+.+++..+.++... +| .++.+...+|..++++++.+.....
T Consensus 238 ----V--fgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~---~~-------~~~~~~a~~G~~~~~~~f~lii~a~----- 296 (403)
T PF03209_consen 238 ----V--FGMSVGETTRLTAFWGGGTLLGMLLAGFLLS---RR-------LGKKRTAALGCLLGALAFALIILAG----- 296 (403)
T ss_pred ----H--cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc---CC-------CCchHHHHHHHHHHHHHHHHHHHHH-----
Confidence 0 1122 122344444555555555665553 22 2233445677777777777666542
Q ss_pred HhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 007736 447 AARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVHK 526 (591)
Q Consensus 447 ~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~ 526 (591)
..-+.+.+.+..+++|++.++......+...+..+++..|..+|.+...+.++..++.++++.+.|
T Consensus 297 --------------~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D 362 (403)
T PF03209_consen 297 --------------PLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRD 362 (403)
T ss_pred --------------hcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123466677888999999999998888999999999999999999999999999999999999987
Q ss_pred cc
Q 007736 527 VT 528 (591)
Q Consensus 527 ~~ 528 (591)
..
T Consensus 363 ~~ 364 (403)
T PF03209_consen 363 LV 364 (403)
T ss_pred HH
Confidence 64
No 125
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.41 E-value=1.1e-12 Score=139.13 Aligned_cols=196 Identities=12% Similarity=0.060 Sum_probs=150.7
Q ss_pred cCCCCcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhch
Q 007736 19 KGRPAERSKTGGWTSAAMILGGEACERLTTLGIAVNLVTYLTG-TMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLG 97 (591)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~G 97 (591)
+..+.++..+.+||++++..+..++....+..+.+.+-+|+++ +.+.+.+..|++.+...++..++++..|+-+.|. |
T Consensus 21 ~~~~~~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~ 99 (488)
T KOG2325|consen 21 DSLSPLDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-G 99 (488)
T ss_pred CccccccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-C
Confidence 3444556667899999999999999999998888889999875 4778888999999999999999999999999997 7
Q ss_pred h-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCC
Q 007736 98 R-YLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFD 176 (591)
Q Consensus 98 r-k~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 176 (591)
+ |+-++.++++.++|.++-......|. ...+.++++|++.|+|.+.. ...-+|+++..-
T Consensus 100 ~~k~Pli~s~ii~~~g~llY~~l~~~~~-------------------~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~ 159 (488)
T KOG2325|consen 100 SVKKPLIVSFLIAIIGNLLYLALAYVPN-------------------GVKYLMLVARILTGVGVGNF-AVLRAYIADAST 159 (488)
T ss_pred CcccCHHHHHHHHHHHHHHHHHHHhccc-------------------chHHHHHHHHHHcCcCcccH-HHHHHHHHhccC
Confidence 4 77777899999999888744433331 37788999999999998875 466789999888
Q ss_pred CCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhc----cc---------cccchhHHHHHHHHHHHHHHHHhcCCc
Q 007736 177 DSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQ----DN---------LGREWGYGICACAIVFGLVVFLSGTRR 241 (591)
Q Consensus 177 ~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~----~~---------~g~~~~f~~~~~~~~~~~~~~~~~~~~ 241 (591)
.++ |.++++....+..+|..+||.+...+. .. .-+..+-|+.++.-++.++++....+|
T Consensus 160 ~~d------R~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E 231 (488)
T KOG2325|consen 160 VED------RPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKE 231 (488)
T ss_pred ccc------hHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheee
Confidence 888 889988877777777777776654432 11 124455566666666666665555554
No 126
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.38 E-value=2.8e-12 Score=137.89 Aligned_cols=181 Identities=11% Similarity=-0.019 Sum_probs=138.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC--------hHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLG--------NASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAI 104 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~ 104 (591)
.++..++..++..........+++.|+++ .|.+ ....+.+.+...+...++.++.|+++||+ |||+++.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~ 286 (418)
T TIGR00889 209 RMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLL 286 (418)
T ss_pred CeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHH
Confidence 34455555666555555566777888764 4433 35678888889999999999999999998 99999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhh
Q 007736 105 FATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERN 184 (591)
Q Consensus 105 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 184 (591)
+.++.+++..+....... ..+...+++.+++.|++.+...+....+++|.+|+++
T Consensus 287 ~~~~~~v~~~l~~~~~~~--------------------~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~----- 341 (418)
T TIGR00889 287 SLVAWALRFGFFAYGDPE--------------------YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI----- 341 (418)
T ss_pred HHHHHHHHHHHHHHcCcc--------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH-----
Confidence 999888877666653100 0134566778889999988888888899999999998
Q ss_pred ccchhhhhhH-HHHhhchhhhhhhhhhhccc------cccchhHHHHHHHHHHHHHHHHhcCCc
Q 007736 185 QMTNFFNWFF-FFISIGSLAAVTVLVYIQDN------LGREWGYGICACAIVFGLVVFLSGTRR 241 (591)
Q Consensus 185 ~r~~~~~~~~-~~~~ig~~~~p~i~~~l~~~------~g~~~~f~~~~~~~~~~~~~~~~~~~~ 241 (591)
|++++++.+ ....+|..+||.++|++.++ +||+.+|.+.+++.+++.+.+++..++
T Consensus 342 -~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~ 404 (418)
T TIGR00889 342 -RASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKY 404 (418)
T ss_pred -HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999986 56789999999999999887 469999988876666665555555443
No 127
>PRK03699 putative transporter; Provisional
Probab=99.38 E-value=5.6e-12 Score=134.42 Aligned_cols=170 Identities=14% Similarity=0.117 Sum_probs=134.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
+.++...+..++.....+++..|+|.|+++.+|++..+.+.+.+.+.++..++.++.|+++||+ |||+.+.....+.++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~ 283 (394)
T PRK03699 205 IGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALV 283 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHH
Confidence 4566667777777778888999999999999999999999999999999999999999999998 999998877766666
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
...+.... .+...+.+..++.|++.+...+...++..+..|++ +++..+
T Consensus 284 ~~~~~~~~------------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~g 332 (394)
T PRK03699 284 LMYLFVNT------------------------DDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-------SPKLVN 332 (394)
T ss_pred HHHHHHHc------------------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-------CHHHHH
Confidence 55444432 23444455566778877777777777777766543 456678
Q ss_pred hhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHH
Q 007736 192 WFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLV 233 (591)
Q Consensus 192 ~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~ 233 (591)
+...+.++|+.++|.+.|++.+..|++..+++.+++.+++.+
T Consensus 333 ~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 333 FILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFV 374 (394)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHH
Confidence 888888999999999999999999999998877766555544
No 128
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.38 E-value=9.3e-12 Score=131.09 Aligned_cols=170 Identities=15% Similarity=0.093 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHH
Q 007736 34 AAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGV 113 (591)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 113 (591)
.+......++..........++|.|+++++|.+..+.+++.+.......++.++.|+++||+ |||+++.++.++..+..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 279 (375)
T TIGR00899 201 TRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFY 279 (375)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHH
Confidence 34344444444444555667789999889999999999888877777888899999999998 99999888776655544
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhh
Q 007736 114 TILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWF 193 (591)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 193 (591)
...... .+.+.+.+.+++.+++.+...+....+..|..|+ + ++++.+++
T Consensus 280 ~~~~~~------------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~------~~~~~~~~ 328 (375)
T TIGR00899 280 TGLAAD------------------------NSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-R------AGAATTLY 328 (375)
T ss_pred HHHHHH------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-h------hhHHHHHH
Confidence 443332 3556666677888888887777777888888875 3 56999999
Q ss_pred HHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHH
Q 007736 194 FFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVF 235 (591)
Q Consensus 194 ~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 235 (591)
+...++|..++|.+.|.+.+..||+..|++.++..+++.+..
T Consensus 329 ~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 329 TNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988887666665544
No 129
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.38 E-value=6.2e-12 Score=134.33 Aligned_cols=171 Identities=13% Similarity=0.001 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHH
Q 007736 34 AAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGV 113 (591)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 113 (591)
.+.+....++.....+....++|.|+.+ .|++..+.+.+.+.+.++..++.++.|+++||+ |||+.+.++....+++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~ 299 (406)
T PRK11551 222 TLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASL 299 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHH
Confidence 3444444555556777788889999875 799999999999999999999999999999997 99999888666665555
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhh
Q 007736 114 TILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWF 193 (591)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 193 (591)
++.... .+...+.+..++.|++.++..+...++..|.+|+++ |+++.+++
T Consensus 300 ~~~~~~------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~ 349 (406)
T PRK11551 300 AALAAA------------------------PSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV------RGTGVGAA 349 (406)
T ss_pred HHHHhc------------------------CcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh------hhhhhhHH
Confidence 544433 244445556667777777777888899999999999 99999999
Q ss_pred HHHHhhchhhhhhhhhhhccccc-cchhHHHHHHHHHHHHHHHH
Q 007736 194 FFFISIGSLAAVTVLVYIQDNLG-REWGYGICACAIVFGLVVFL 236 (591)
Q Consensus 194 ~~~~~ig~~~~p~i~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~ 236 (591)
+....+|..++|.++|++.++.+ |...++....+.+++.+..+
T Consensus 350 ~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 350 VAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988754 55555555544444444433
No 130
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.37 E-value=6.6e-12 Score=133.86 Aligned_cols=168 Identities=17% Similarity=0.093 Sum_probs=133.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHH
Q 007736 40 GEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTIS 119 (591)
Q Consensus 40 ~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~ 119 (591)
...+...++.....+++.|+.+ .|.+ +.+...+.+.++..++.++.|+++||+ |||+.+..+..+.+++.++....
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~ 299 (399)
T PRK05122 224 GLALASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLA 299 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHh
Confidence 3344556666777888888764 4553 445666778888899999999999997 99999998888888877766654
Q ss_pred hhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhh
Q 007736 120 TIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISI 199 (591)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 199 (591)
.+...+.+.+++.|++.+...+.......|.+|+++ |+++.++++...++
T Consensus 300 ------------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~ 349 (399)
T PRK05122 300 ------------------------PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQN------RGAALGAYSVFLDL 349 (399)
T ss_pred ------------------------ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHH
Confidence 355566777888999998888777778889899888 99999999999999
Q ss_pred chhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCc
Q 007736 200 GSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRR 241 (591)
Q Consensus 200 g~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 241 (591)
|..++|.+.|.+.+..||+..|++.+++.+++.+..+...++
T Consensus 350 g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 350 SLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999998877766666555544443
No 131
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.36 E-value=1.7e-11 Score=127.00 Aligned_cols=173 Identities=20% Similarity=0.204 Sum_probs=150.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHH-HHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYL-TIAIFATVQA 110 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~-~~~~~~~~~~ 110 (591)
+.++...+..++..........+++.++.+.+|.+..+.+.+.+...++..++.++.|+++||+ |||+ .+.++..+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 253 (352)
T cd06174 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAA 253 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHH
Confidence 3445555566677777778888899999888899999999999999999999999999999998 9999 9999998888
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhh
Q 007736 111 AGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFF 190 (591)
Q Consensus 111 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 190 (591)
++.++.... .+...+.+..++.+++.+...+...+++.|.+|+++ |++.+
T Consensus 254 i~~~~~~~~------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 303 (352)
T cd06174 254 LGLLLLALA------------------------PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEA------RGTAS 303 (352)
T ss_pred HHHHHHHHh------------------------ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH------HHHHH
Confidence 888877765 356677888999999999999999999999999988 99999
Q ss_pred hhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHH
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVF 235 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 235 (591)
++.+...++|..++|.+.+.+.+..+|+..+++..+..+++.+..
T Consensus 304 ~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 304 GLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998999999998887766665543
No 132
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.35 E-value=2.1e-11 Score=130.06 Aligned_cols=177 Identities=14% Similarity=-0.014 Sum_probs=137.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
+..|.+.+..++...+++++..++|.|+.+ +|.+..+.+...+.+.++..++.++.|+++||+ |||+.+.++..+..+
T Consensus 205 ~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~ 282 (393)
T PRK09705 205 PRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLV 282 (393)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHH
Confidence 345666667777788888999999999976 899999999999999999999999999999997 999999988877777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCC-CCChhhhhccchhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFD-DSDPQERNQMTNFF 190 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~-~~~~~~~~~r~~~~ 190 (591)
+..+.... | .+...+. .++.|++.+...+.......+..+ +++ +++.+
T Consensus 283 ~~~~~~~~---~--------------------~~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~------~g~~~ 331 (393)
T PRK09705 283 GFCGFIWL---P--------------------LQLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPAI------AGKLV 331 (393)
T ss_pred HHHHHHHc---c--------------------chHHHHH--HHHHHHhccchHHHHHHHHHhhcCCHHH------HHHHH
Confidence 66654432 1 1222221 234577777777777767777775 445 89999
Q ss_pred hhhHHHHhhchhhhhhhhhhhccccc-cchhHHHHHHHHHHHHHHHHhcCCc
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDNLG-REWGYGICACAIVFGLVVFLSGTRR 241 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~~ 241 (591)
++.+...++++.++|.+.|++.|..| |...|++.+++.+++.+..+...++
T Consensus 332 g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (393)
T PRK09705 332 AFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPA 383 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999886 7888888776666666655555554
No 133
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.35 E-value=1.8e-11 Score=132.28 Aligned_cols=181 Identities=13% Similarity=0.051 Sum_probs=124.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhch--hHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLG--RYLTIAIFATVQ 109 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~G--rk~~~~~~~~~~ 109 (591)
+.+|.+.+..++....++++..++|.|+.+++|++..+.+...+.+.+++.++.+++|+++||+.+ |+..........
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~ 322 (434)
T PRK11663 243 PYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGI 322 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHH
Confidence 356777776777777778888999999988899999999999999999999999999999999622 222222221111
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchh
Q 007736 110 AAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNF 189 (591)
Q Consensus 110 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 189 (591)
.+........ +. .+.....+..++.|++............+|.+|+++ |+++
T Consensus 323 ~~~~~~~~~~---~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~ 374 (434)
T PRK11663 323 LLSVGSLWLM---PF-------------------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA------AGAA 374 (434)
T ss_pred HHHHHHHHHc---cc-------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh------HHhH
Confidence 1111111111 10 122222233333343322222223456688898888 9999
Q ss_pred hhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCC
Q 007736 190 FNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTR 240 (591)
Q Consensus 190 ~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 240 (591)
.++.+...++|+.++|.+.|++.++.||+..|++.+++.+++.+..+...+
T Consensus 375 ~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 425 (434)
T PRK11663 375 TGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLN 425 (434)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999998887776666554444333
No 134
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.34 E-value=1.2e-11 Score=134.36 Aligned_cols=177 Identities=14% Similarity=0.115 Sum_probs=123.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhc-hhHHHH-HHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFL-GRYLTI-AIFATVQ 109 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~-Grk~~~-~~~~~~~ 109 (591)
+.+|...+..++.....++...++|.|+++..|++..+.+.+...+.++..++.+++|+++||+. |||+.. .....+.
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~ 332 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLV 332 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHH
Confidence 45777778888888888899999999999989999999999888888999999999999999961 334322 2222333
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchh
Q 007736 110 AAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNF 189 (591)
Q Consensus 110 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 189 (591)
.++..+..+... .+.....+..++.|.+..........+..|.+|++. |+++
T Consensus 333 ~~~~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~ 384 (452)
T PRK11273 333 TIATIVYWLNPA----------------------GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA------AGTA 384 (452)
T ss_pred HHHHHHHHHhcc----------------------cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh------hhhH
Confidence 333332222100 122333334444444332222233345679999998 9999
Q ss_pred hhhhHHHHhhchhh-hhhhhhhhccccccchhHHHHHHHHHHHHHHHH
Q 007736 190 FNWFFFFISIGSLA-AVTVLVYIQDNLGREWGYGICACAIVFGLVVFL 236 (591)
Q Consensus 190 ~~~~~~~~~ig~~~-~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 236 (591)
.++.+...++|+.+ +|.+.|++.++.||+..|++.....+++.+...
T Consensus 385 ~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 385 AGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 99998888888665 799999999999999999887766666554443
No 135
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.34 E-value=4.6e-12 Score=136.22 Aligned_cols=172 Identities=12% Similarity=0.053 Sum_probs=133.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhc---CCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 35 AMILGGEACERLTTLGIAVNLVTYLTGTM---HLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
+.+.+..++....+.....+++.|+.+.+ +.+..+.+.+.+...++..++.+++|+++||+ |||+.+.++.++.++
T Consensus 226 ~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~ 304 (420)
T PRK09528 226 WFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAV 304 (420)
T ss_pred EeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHH
Confidence 33333333444444445556777776543 56777889999999999999999999999998 999999998888888
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
+..+..++ .+.+.+.+.+++.+++.+...+....++.|.+|++. +++..+
T Consensus 305 ~~~l~~~~------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~~~~ 354 (420)
T PRK09528 305 RIIGSGFA------------------------TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SATIYL 354 (420)
T ss_pred HHHHHHhc------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eeeeee
Confidence 87777664 356667777888888887777777788999999888 888776
Q ss_pred h-hHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHh
Q 007736 192 W-FFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLS 237 (591)
Q Consensus 192 ~-~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 237 (591)
. ++...++|..++|.+.|++.+.+||+..|.+.+++.+++.++.+.
T Consensus 355 ~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 355 VGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVF 401 (420)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Confidence 6 677888999999999999999999999999877665555544443
No 136
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.33 E-value=2.7e-11 Score=127.51 Aligned_cols=176 Identities=14% Similarity=0.014 Sum_probs=130.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHH-HHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLT-IAIFATVQA 110 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~-~~~~~~~~~ 110 (591)
+.++...+..++..........++|.|+++.+|.+..+.+++.+...++..++.+++|+++||+ |||+. +........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHH
Confidence 4677778888888889999999999999999999999999999999999999999999999997 88861 111111111
Q ss_pred HHH---HHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccc
Q 007736 111 AGV---TILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMT 187 (591)
Q Consensus 111 i~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 187 (591)
++. .+....... ..+.........+.+.+.+ ..+...++..|.+|+++ |+
T Consensus 294 ~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~g 346 (399)
T TIGR00893 294 IAGLVLSLLMFATNY--------------------VNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNI------AG 346 (399)
T ss_pred HHHHHHHHHHHHhcc--------------------chhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhH------HH
Confidence 211 111111000 0122233333333334444 67888999999999999 99
Q ss_pred hhhhhhHHHHhhchhhhhhhhhhhccccc-cchhHHHHHHHHHHHHHHH
Q 007736 188 NFFNWFFFFISIGSLAAVTVLVYIQDNLG-REWGYGICACAIVFGLVVF 235 (591)
Q Consensus 188 ~~~~~~~~~~~ig~~~~p~i~~~l~~~~g-~~~~f~~~~~~~~~~~~~~ 235 (591)
++.++.+...++|..++|.+.|++.+..| |+..|++.++..+++.+..
T Consensus 347 ~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 347 LTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988 9999888776666555443
No 137
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.33 E-value=1.3e-11 Score=131.64 Aligned_cols=169 Identities=14% Similarity=0.058 Sum_probs=131.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCChH---HHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHH
Q 007736 39 GGEACERLTTLGIAVNLVTYLTGTMHLGNA---SAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTI 115 (591)
Q Consensus 39 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l 115 (591)
...++.......+.++++.|+.+..+.... ..+.+.+.+.++..++.++.|+++||+ |||+.+..+..+..++.++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~ 304 (408)
T PRK09874 226 VTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIP 304 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHH
Confidence 333444455555667788888765432221 245555666778888999999999997 9999999888877776666
Q ss_pred HHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHH
Q 007736 116 LTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFF 195 (591)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 195 (591)
.... .+.+.+.+.+++.|++.+...+...+.+.+..|++. |++.+++++.
T Consensus 305 ~~~~------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~ 354 (408)
T PRK09874 305 MSFV------------------------QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI------AGRIFSYNQS 354 (408)
T ss_pred HHHh------------------------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc------ceeeehHHHH
Confidence 5543 356667778889999999988888888888889888 9999999999
Q ss_pred HHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhc
Q 007736 196 FISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSG 238 (591)
Q Consensus 196 ~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 238 (591)
..++|..+||.++|.+.+..||+..|++.+++.+++.+..+..
T Consensus 355 ~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 355 FRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998887776666555443
No 138
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.32 E-value=4.3e-11 Score=127.08 Aligned_cols=169 Identities=7% Similarity=-0.029 Sum_probs=145.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
+.++..++..++...++.....+.+.|+++ +|.+..+.+.+.+...++..+..++.|++.||+ |+|+.+.++.+...+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHH
Confidence 557777788888888888999999999965 899999999999988899999999999999998 999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
...+.++. ++.+.+++..++.|+..+...+....++.+. |+++ |+++.+
T Consensus 283 ~~~~~~~~------------------------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~------~~~~q~ 331 (382)
T TIGR00902 283 RWAIIGAI------------------------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE------IAKLQA 331 (382)
T ss_pred HHHHHHhH------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh------HHHHHH
Confidence 98888765 5778888889999999999999999999987 8877 899999
Q ss_pred hhH-HHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHH
Q 007736 192 WFF-FFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVV 234 (591)
Q Consensus 192 ~~~-~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 234 (591)
+++ ....+|..++|.++|++.|++|+ ..|.+.+...++++++
T Consensus 332 ~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 332 LYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 976 46779999999999999999986 5566666655555433
No 139
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.31 E-value=1.8e-11 Score=138.73 Aligned_cols=131 Identities=8% Similarity=0.023 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHH
Q 007736 74 VTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIAL 153 (591)
Q Consensus 74 ~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (591)
..+..++..++.+++|+++||+ |||+++.++.++.+++.++.++. .+...+++.+
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~------------------------~s~~~ll~~~ 655 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFG------------------------NSESAMIALL 655 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHH------------------------ccHHHHHHHH
Confidence 4455688899999999999997 99999999999999888887765 2444556667
Q ss_pred HHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHH
Q 007736 154 YLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLV 233 (591)
Q Consensus 154 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~ 233 (591)
++.+++.++..+...++++|++|++. |++++|+.+....+|++++|++++.+.+. +...+|++.+++.+++.+
T Consensus 656 ~l~g~~~~~~~~~~~a~~aEl~Pt~~------Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~l 728 (742)
T TIGR01299 656 CLFGGLSIAAWNALDVLTVELYPSDK------RATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGL 728 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHH
Confidence 77777777778888999999999999 99999999999999999999999988764 455667766665555544
Q ss_pred HHH
Q 007736 234 VFL 236 (591)
Q Consensus 234 ~~~ 236 (591)
+.+
T Consensus 729 l~~ 731 (742)
T TIGR01299 729 LAL 731 (742)
T ss_pred HHH
Confidence 433
No 140
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.31 E-value=1.5e-11 Score=132.13 Aligned_cols=176 Identities=10% Similarity=-0.044 Sum_probs=136.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHH
Q 007736 34 AAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGV 113 (591)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 113 (591)
++..++..++.. ...++..++|.|+++.+|.+..+.+++.+...++..++.++.|+++||. ++++.+..+..+.+++.
T Consensus 226 ~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~ 303 (417)
T PRK10489 226 VGGIALLGGLLT-MASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAV 303 (417)
T ss_pred HHHHHHHHHHHH-HHHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHH
Confidence 344444444432 2456677889999888999999999999999999999999999999996 88888888877777776
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhh
Q 007736 114 TILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWF 193 (591)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 193 (591)
++.... .+.....+..++.|++.+...+...+++.|.+|++. |+++++++
T Consensus 304 ~~~~~~------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~ 353 (417)
T PRK10489 304 GLFGLM------------------------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM------LGRINGLW 353 (417)
T ss_pred HHHHcc------------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH------HHHHHHHH
Confidence 666543 355556667777888887776777788999999888 99999999
Q ss_pred HHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCc
Q 007736 194 FFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRR 241 (591)
Q Consensus 194 ~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 241 (591)
+...++|..+||.+.|++.+.+|++..+++.+++..+..++.....++
T Consensus 354 ~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (417)
T PRK10489 354 TAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGE 401 (417)
T ss_pred HHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999998888876665544444444443333
No 141
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.30 E-value=3.7e-11 Score=123.81 Aligned_cols=186 Identities=15% Similarity=0.044 Sum_probs=148.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQA 110 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~ 110 (591)
.+..|.+.+.++..--++-++..++|.|+++++++++.+.+.+...+.+.+.+..+++|+||||+ |.+|+.++.....+
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~ 295 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMA 295 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999998 99998888888888
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhh
Q 007736 111 AGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFF 190 (591)
Q Consensus 111 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 190 (591)
++..+.....+. .+| ..+........+.+++..|.-...+..++...+|++ -+...
T Consensus 296 ~~~~~l~~~~~~---------~~~--------~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-------~G~v~ 351 (417)
T COG2223 296 LAAALLSLFLTG---------FGH--------GGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-------TGAVT 351 (417)
T ss_pred HHHHHHHccccc---------ccc--------CcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-------hhHHH
Confidence 887777765210 001 123444444444455555555556678888888774 58999
Q ss_pred hhhHHHHhhchhhhhhhhhhhccccc-cchhHHHHHHHHHHHHHHHHhcCCc
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDNLG-REWGYGICACAIVFGLVVFLSGTRR 241 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~~ 241 (591)
|+.....++|+..-|...+...+..| +...|++.....+++.++.+....+
T Consensus 352 G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 352 GIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999988887 8888988887777777665554443
No 142
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.30 E-value=1.5e-11 Score=130.64 Aligned_cols=158 Identities=15% Similarity=0.093 Sum_probs=124.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHH
Q 007736 36 MILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTI 115 (591)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l 115 (591)
.......+.+...+....++|.|+.+++|++..+.+++.+...++..++.++.|+++||+ |||+.+.++..+..+....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~ 320 (405)
T TIGR00891 242 YLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLIIP 320 (405)
T ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHHHH
Confidence 334444455566667778899999999999999999999999999999999999999997 9999988877655333222
Q ss_pred HHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHH
Q 007736 116 LTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFF 195 (591)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 195 (591)
.... . .+...+.+..++.++..++..+..++++.|.+|+++ |++++|+.+.
T Consensus 321 ~~~~---~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~ 371 (405)
T TIGR00891 321 VFAI---G--------------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ------RAAGLGFTYQ 371 (405)
T ss_pred HHHh---C--------------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch------hHHHhhHHHH
Confidence 2111 0 244455555566666666667778889999999998 9999999999
Q ss_pred HHhhchhhhhhhhhhhccccc-cchhHHH
Q 007736 196 FISIGSLAAVTVLVYIQDNLG-REWGYGI 223 (591)
Q Consensus 196 ~~~ig~~~~p~i~~~l~~~~g-~~~~f~~ 223 (591)
..++|+.++|.+.|++.++.| |+..+..
T Consensus 372 ~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 372 LGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 999999999999999999988 8766554
No 143
>PRK03545 putative arabinose transporter; Provisional
Probab=99.29 E-value=8e-11 Score=125.28 Aligned_cols=176 Identities=10% Similarity=-0.058 Sum_probs=134.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAG 112 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 112 (591)
.++......++.....+....+++.|+.+.+|.+..+.+++.+...++..++.++.|+++||+ |||+.. .+..+..++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~ 283 (390)
T PRK03545 206 ALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVC 283 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHH
Confidence 344455555666666677778889999888999999999999999999999999999999997 987654 444444444
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhh
Q 007736 113 VTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNW 192 (591)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 192 (591)
..+..... .+...+.+..++.|++.+...+.....+.+..| +. |+++.++
T Consensus 284 ~~~l~~~~-----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~g~ 333 (390)
T PRK03545 284 LLLLLPAA-----------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DA------TDVAMAL 333 (390)
T ss_pred HHHHHHHh-----------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-Cc------HHHHHHH
Confidence 43332211 355666667777888877766667777777766 46 8999999
Q ss_pred hHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCC
Q 007736 193 FFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTR 240 (591)
Q Consensus 193 ~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 240 (591)
++...++|..+||.++|++.+++|++..|++.+.+.+++++..+...+
T Consensus 334 ~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 334 FSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 998899999999999999999999999999888877777766655443
No 144
>PRK15075 citrate-proton symporter; Provisional
Probab=99.29 E-value=2.8e-11 Score=130.78 Aligned_cols=153 Identities=13% Similarity=0.071 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHH-H
Q 007736 38 LGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTI-L 116 (591)
Q Consensus 38 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l-~ 116 (591)
+...++....++.+..++|.|+++.+|++..+.++....+.++..++.+++|+++||+ |||+.+..+..+..+...+ .
T Consensus 244 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 322 (434)
T PRK15075 244 MLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPAL 322 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHH
Confidence 4445556777888999999999988999999998888888899999999999999998 9999888765443322211 1
Q ss_pred HHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhh-HH
Q 007736 117 TISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWF-FF 195 (591)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~ 195 (591)
...... .+.....+..++.+++.+...+....++.|.+|++. |++++++. ++
T Consensus 323 ~~~~~~---------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~------rg~~~g~~~~~ 375 (434)
T PRK15075 323 SWLVAA---------------------PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV------RTAGFSLAYSL 375 (434)
T ss_pred HHHHcC---------------------CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc------cchheeHHHHH
Confidence 111000 122223333444455555655666688899999999 99999995 44
Q ss_pred HHhhchhhhhhhhhhhccccccc
Q 007736 196 FISIGSLAAVTVLVYIQDNLGRE 218 (591)
Q Consensus 196 ~~~ig~~~~p~i~~~l~~~~g~~ 218 (591)
+..+++.++|.+.+++.++.|+.
T Consensus 376 ~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 376 ATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHhhhHHHHHHHHHHhcCCc
Confidence 44456888999999999988864
No 145
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.27 E-value=6.4e-11 Score=126.63 Aligned_cols=177 Identities=12% Similarity=0.035 Sum_probs=131.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHH-HHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIA-IFATVQA 110 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~-~~~~~~~ 110 (591)
+.++...+..++...++++...++|.|++ ++|++..+.+.+.+.+.++..++.++.|+++||+ |||+.+. .+.+..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~ 299 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCG 299 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHH
Confidence 45677777788888899999999999985 5899999999998899999999999999999997 9888764 3333333
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhh
Q 007736 111 AGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFF 190 (591)
Q Consensus 111 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 190 (591)
++...+...... ...+.....+..++.|++.+...+ ..+...|.. +++ |+++.
T Consensus 300 ~~~~~l~~~~~~-------------------~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~-~~~------~g~~~ 352 (402)
T TIGR00897 300 IFTLALYYIPQH-------------------FGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLA-PKH------KGAAM 352 (402)
T ss_pred HHHHHHHHHHHc-------------------cCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhC-cch------hHHHH
Confidence 333332221100 002445555667777777766544 345566654 456 99999
Q ss_pred hhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHh
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLS 237 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 237 (591)
++.+...++|..++|.+++.+.+.+||...|++.+++.+++.+..++
T Consensus 353 g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 353 SVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888776666554443
No 146
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.27 E-value=9e-12 Score=111.01 Aligned_cols=132 Identities=15% Similarity=0.198 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHH
Q 007736 75 TNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALY 154 (591)
Q Consensus 75 ~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (591)
+.+.++..++.++.|+++||+ |||+.+..+..+..++.+++... .+...+.+.++
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~ 59 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALS------------------------SNITVLIIARF 59 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHh------------------------ccHHHHHHHHH
Confidence 445678889999999999997 99999999988888888777664 36777788899
Q ss_pred HHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHH
Q 007736 155 LTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVV 234 (591)
Q Consensus 155 l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 234 (591)
+.|++.+...+...+++.|.+|+++ |++..++.+....+|..++|.+.+.+.+..+|++.|++.....+++.+.
T Consensus 60 ~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (141)
T TIGR00880 60 LQGFGAAFALVAGAALIADIYPPEE------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFIL 133 (141)
T ss_pred HHHHHHHHHHHhHHHHHHHHCChhh------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 9999999988999999999999998 9999999999999999999999999999889999988877665555544
Q ss_pred HHh
Q 007736 235 FLS 237 (591)
Q Consensus 235 ~~~ 237 (591)
.+.
T Consensus 134 ~~~ 136 (141)
T TIGR00880 134 LAF 136 (141)
T ss_pred Hhh
Confidence 443
No 147
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.26 E-value=6.8e-11 Score=129.85 Aligned_cols=149 Identities=15% Similarity=0.125 Sum_probs=115.5
Q ss_pred HHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 007736 49 LGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPP 128 (591)
Q Consensus 49 ~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~ 128 (591)
+....++|.|+++++|++..+.+.+.+.+.++..++.+++|+++||+ |||+++.++.++..+..++......
T Consensus 292 ~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~------- 363 (496)
T PRK03893 292 WPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIGG------- 363 (496)
T ss_pred chHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhccc-------
Confidence 34667899999889999999999999999999999999999999997 9999988877665555444332210
Q ss_pred CCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhh
Q 007736 129 KCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVL 208 (591)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~ 208 (591)
.+.+.+.+..++.+....+..+..++++.|.+|+++ |++.+++++...++|+.++|.++
T Consensus 364 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~lgp~l~ 422 (496)
T PRK03893 364 ---------------ANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ------RAAGLGFTYNVGALGGALAPILG 422 (496)
T ss_pred ---------------cHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH------hhcccchhhhhhhHHHHHHHHHH
Confidence 233333334444333333344566788899999988 99999999999999999999999
Q ss_pred hhhccccccchhHHHHHH
Q 007736 209 VYIQDNLGREWGYGICAC 226 (591)
Q Consensus 209 ~~l~~~~g~~~~f~~~~~ 226 (591)
|.+.+.+||+..+.+.+.
T Consensus 423 g~l~~~~g~~~~~~~~~~ 440 (496)
T PRK03893 423 ALIAQRLDLGTALASLSF 440 (496)
T ss_pred HHHhccCChHHHHHHHHH
Confidence 999999999888765543
No 148
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.26 E-value=7.8e-11 Score=129.33 Aligned_cols=179 Identities=16% Similarity=0.115 Sum_probs=131.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHH-HHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVT-NFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
..+.+....++.....+....+.++|+.+.+|++..+.+++.. ...++..++.+++|+++||+ ||||.+.++.++.++
T Consensus 223 ~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l 301 (491)
T PRK11010 223 NAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGV 301 (491)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHH
Confidence 3455555556666777777788899988889999999999874 55689999999999999998 999988776665555
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
+.+........+ .+...+.+..++..+..|...+...++..+..+++. +++.++
T Consensus 302 ~~l~~~~l~~~~--------------------~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~------~~t~~g 355 (491)
T PRK11010 302 SNAGYWLLSITD--------------------KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF------SATQFA 355 (491)
T ss_pred HHHHHHHHHhcc--------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHH
Confidence 443332211000 133334444555444445445666788888999888 888999
Q ss_pred hhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhc
Q 007736 192 WFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSG 238 (591)
Q Consensus 192 ~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 238 (591)
+.+...++|..+++.+.|++.+.+||+..|.+.+++.+++.+.....
T Consensus 356 l~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 356 LLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988887777776665544
No 149
>PRK12382 putative transporter; Provisional
Probab=99.26 E-value=4.7e-11 Score=127.04 Aligned_cols=164 Identities=17% Similarity=0.151 Sum_probs=131.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHH
Q 007736 40 GEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTIS 119 (591)
Q Consensus 40 ~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~ 119 (591)
..++....+..+..+++.|+++ .|++. .+.....+.++..++.++.|++.||+ ||||.+..+..+.+++..+....
T Consensus 224 ~~~l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~ 299 (392)
T PRK12382 224 GLALQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLA 299 (392)
T ss_pred HHHHHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHc
Confidence 3344455666677788888764 46553 45556667778889999999999997 99999999888888877766654
Q ss_pred hhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhh
Q 007736 120 TIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISI 199 (591)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 199 (591)
.+...+.+..++.|++.+...+...+...|.+|+++ |+++.++++...++
T Consensus 300 ------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~ 349 (392)
T PRK12382 300 ------------------------PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV------RGTALGGYAAFQDI 349 (392)
T ss_pred ------------------------ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHH
Confidence 345566677888899888878888888899999888 99999999999999
Q ss_pred chhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHh
Q 007736 200 GSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLS 237 (591)
Q Consensus 200 g~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 237 (591)
|..++|.+.|++.++.||+..|.+.+.+.+++.+..+.
T Consensus 350 g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 350 AYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999888777666655543
No 150
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.26 E-value=1e-10 Score=126.28 Aligned_cols=176 Identities=14% Similarity=0.068 Sum_probs=112.7
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHH
Q 007736 34 AAMILGGEA-CERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAG 112 (591)
Q Consensus 34 ~~~~~~~~~-~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 112 (591)
.+...+..+ +....+|++..|+|.|+.+.+|.+..+.+...+...+...++.++.|+++||+ |||+.+.++..+.++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~ 322 (432)
T PRK10406 244 AFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALF 322 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHH
Confidence 344443333 44778899999999999988999999999888888888889999999999997 9999887765544333
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhh
Q 007736 113 VTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNW 192 (591)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 192 (591)
........... .+....+....+..++.+...+....+.+|.+|++. |+++.|+
T Consensus 323 ~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~------r~t~~g~ 376 (432)
T PRK10406 323 TVPILSALQNV--------------------SSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV------RALGVGL 376 (432)
T ss_pred HHHHHHHHHcC--------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc------cchhhhH
Confidence 32221110000 111211111122222233333456678899999999 9999999
Q ss_pred hHHHHh-hchhhhhhhhhhhccccc-cchhHHHHHHHHHHHHHHHHh
Q 007736 193 FFFFIS-IGSLAAVTVLVYIQDNLG-REWGYGICACAIVFGLVVFLS 237 (591)
Q Consensus 193 ~~~~~~-ig~~~~p~i~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~ 237 (591)
.+...+ +++...|.+.+++. ..| |...+++.++..+++.+..++
T Consensus 377 ~~~~g~~~~g~~~p~~~~~l~-~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 377 SYAVANALFGGSAEYVALSLK-SIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHHHHHHhHHHHHHHHHH-HhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 665544 44555788888664 445 555566555555555444443
No 151
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.24 E-value=1.5e-10 Score=122.84 Aligned_cols=158 Identities=15% Similarity=0.186 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 007736 43 CERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTII 122 (591)
Q Consensus 43 ~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~ 122 (591)
+....+.....++|.|+++ .|.+..+.+.+.+...++..++.++.|+++||+ |||+++..+..+..++.+... .
T Consensus 211 ~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~--- 284 (381)
T PRK03633 211 ISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-S--- 284 (381)
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-h---
Confidence 3333444555678888865 699999999999999999999999999999998 999999888777776654432 1
Q ss_pred CCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchh
Q 007736 123 PSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSL 202 (591)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ 202 (591)
. ......+.+.+++.+...|...+...|..|+++ ++...+.++...++|..
T Consensus 285 ----------------------~-~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~~ 335 (381)
T PRK03633 285 ----------------------Q-AAMAPALFILGAAGFTLYPVAMAWACEKVEHHE------LVAMNQALLLSYTVGSL 335 (381)
T ss_pred ----------------------h-HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH------HHHHHHHHHHHHHHHHH
Confidence 1 112334566676666777888888899998877 77788888888999999
Q ss_pred hhhhhhhhhccccccchhHHHHHHHHHHHHHHH
Q 007736 203 AAVTVLVYIQDNLGREWGYGICACAIVFGLVVF 235 (591)
Q Consensus 203 ~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 235 (591)
+||.++|++.|++||++.|.+.+.+.+++.+..
T Consensus 336 igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 336 LGPSFTAMLMQNYSDNLLFIMIASVSFIYLLML 368 (381)
T ss_pred HHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988776655544333
No 152
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.23 E-value=1.4e-10 Score=125.63 Aligned_cols=177 Identities=14% Similarity=0.088 Sum_probs=121.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
+.+|...+..++.....+++..++|.|+++..|++..+.++....+.+...++.+++|+++||+ |+++....+.....+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~ 329 (438)
T TIGR00712 251 KLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTL 329 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHH
Confidence 4566777777777778889999999999998999999999999999999999999999999997 754433333322222
Q ss_pred H---HHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccch
Q 007736 112 G---VTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTN 188 (591)
Q Consensus 112 ~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 188 (591)
. ...+... +. .+........++.|++..+..........|.+|+++ |++
T Consensus 330 ~~~~~~~~~~~---~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~ 381 (438)
T TIGR00712 330 VTIAVIVYWMN---PA-------------------GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGT 381 (438)
T ss_pred HHHHHHHHHhc---CC-------------------CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh------eee
Confidence 1 1111111 00 122222333344444332222222345678999988 999
Q ss_pred hhhhhHHHHhhch-hhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHh
Q 007736 189 FFNWFFFFISIGS-LAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLS 237 (591)
Q Consensus 189 ~~~~~~~~~~ig~-~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 237 (591)
+.|+++...++|+ .++|.+.|.+.++.||...|++.+...+++.+..+.
T Consensus 382 ~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T TIGR00712 382 AAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV 431 (438)
T ss_pred ehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 9999988888775 689999999999999999988776655555554443
No 153
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.19 E-value=2.4e-10 Score=124.34 Aligned_cols=172 Identities=11% Similarity=0.016 Sum_probs=136.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhh-chhHHHHHHHH--HH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTF-LGRYLTIAIFA--TV 108 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~-~Grk~~~~~~~--~~ 108 (591)
+.++..+...++...+++....+++.|+++ +|++..+.+.+.+...++..++.+++|+++||. .++|+...++. ++
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 319 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLF 319 (455)
T ss_pred chHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHH
Confidence 456777777778888888888899999864 799999999999999999999999999999983 14444444333 33
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccch
Q 007736 109 QAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTN 188 (591)
Q Consensus 109 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 188 (591)
.+++.+++... .+.+.+++.+++.|++.+...+...+++.|.+|+++ +++
T Consensus 320 ~~l~~ll~~~~------------------------~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~------~g~ 369 (455)
T TIGR00892 320 NGLTHLLCALA------------------------GDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR------FSS 369 (455)
T ss_pred HHHHHHHHHHh------------------------chHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH------Hhh
Confidence 33333333333 366777788999999999988888999999999988 999
Q ss_pred hhhhhHHHHhhchhhhhhhhhhhcccc-ccchhHHHHHHHHHHHHHH
Q 007736 189 FFNWFFFFISIGSLAAVTVLVYIQDNL-GREWGYGICACAIVFGLVV 234 (591)
Q Consensus 189 ~~~~~~~~~~ig~~~~p~i~~~l~~~~-g~~~~f~~~~~~~~~~~~~ 234 (591)
.+++++...++|..+||.++|.+.+.. +|+..|++.+++.+++.+.
T Consensus 370 ~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 370 AVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 999999999999999999999999887 5999998887765555443
No 154
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.19 E-value=6.6e-10 Score=114.53 Aligned_cols=80 Identities=16% Similarity=0.002 Sum_probs=69.3
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccc---------
Q 007736 144 MQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDN--------- 214 (591)
Q Consensus 144 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~--------- 214 (591)
.++..++++.+++|.|.+...+..++++++..|+++ +.+.+++...+..+|..++|.+++.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~ 81 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQV 81 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhh
Confidence 588899999999999999999999999999999998 89999999999999999999999977632
Q ss_pred -------cccchhHHHHHHHHH
Q 007736 215 -------LGREWGYGICACAIV 229 (591)
Q Consensus 215 -------~g~~~~f~~~~~~~~ 229 (591)
.+|+++|++.+.+..
T Consensus 82 ~~~~~~~~~~~~~yl~ia~~~~ 103 (310)
T TIGR01272 82 ATANAEAAKVHTPYLLLAGALA 103 (310)
T ss_pred hhhhHHHHHHHHHHHHHHHHHH
Confidence 368888885554433
No 155
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.18 E-value=4.1e-10 Score=122.30 Aligned_cols=187 Identities=16% Similarity=0.090 Sum_probs=153.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhH--HHHHHHHH
Q 007736 30 GWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRY--LTIAIFAT 107 (591)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk--~~~~~~~~ 107 (591)
+.|.+...++..++.+-+...+......|.++++|++..+...+.....+...++++++|++.||+ |.| +++++.++
T Consensus 279 ~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~ 357 (477)
T PF11700_consen 279 KLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLI 357 (477)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHH
Confidence 346777888888998999999999999999999999999999999999999999999999999997 988 88888777
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccc
Q 007736 108 VQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMT 187 (591)
Q Consensus 108 ~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 187 (591)
+..+..+...+... +. ...-.+.+.+++.-++.|+..|..++..-++.+++.|+++ .+
T Consensus 358 ~~~~i~~~g~~G~~-~~---------------~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~------e~ 415 (477)
T PF11700_consen 358 LWIIIPLYGLFGFW-PS---------------FFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR------EA 415 (477)
T ss_pred HHHHHHHHHHHHhh-hc---------------ccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch------hh
Confidence 66443333222100 00 0001467778888889999999999999999999999999 99
Q ss_pred hhhhhhHHHHhhchhhhhhhhhhhccccc-cchhHHHHHHHHHHHHHHHHhcC
Q 007736 188 NFFNWFFFFISIGSLAAVTVLVYIQDNLG-REWGYGICACAIVFGLVVFLSGT 239 (591)
Q Consensus 188 ~~~~~~~~~~~ig~~~~p~i~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~ 239 (591)
..+|++.+..-..+.+||++.|.+.+..| .|..+....+..+++++++....
T Consensus 416 efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~ 468 (477)
T PF11700_consen 416 EFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVD 468 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999886 88888877777777777665543
No 156
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.17 E-value=4.1e-10 Score=121.88 Aligned_cols=170 Identities=15% Similarity=0.033 Sum_probs=119.2
Q ss_pred HHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 007736 50 GIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPK 129 (591)
Q Consensus 50 ~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~ 129 (591)
.+..+.+.+ .+++|++..+.++......++..++.+++|+++||+ |||+.+.++.++.+++.+++.+......
T Consensus 302 ~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 374 (481)
T TIGR00879 302 AIMYYSPTI-FENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGILGASFV----- 374 (481)
T ss_pred ehHHHHHHH-HHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHhhccc-----
Confidence 334444444 457899988888888888999999999999999997 9999999988887777776663211000
Q ss_pred CCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhh
Q 007736 130 CNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLV 209 (591)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~ 209 (591)
++. +...+...+....++.+....+..+....++.|.+|+++ |+++.++.+...++|++++|.+.+
T Consensus 375 ----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~~~~lg~~i~~~~~~ 440 (481)
T TIGR00879 375 ----TGS----SKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSL------RPKGISIAVAANWLANFIVGFLFP 440 (481)
T ss_pred ----CCc----ccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHH------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 000022222222222222222334666777899999998 999999999999999999999999
Q ss_pred hhccccccchhHHHHHHHHHHHHHHHHhcCC
Q 007736 210 YIQDNLGREWGYGICACAIVFGLVVFLSGTR 240 (591)
Q Consensus 210 ~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 240 (591)
.+.++.+|++.|++.+++.+++.+..++..+
T Consensus 441 ~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~ 471 (481)
T TIGR00879 441 TMLESIGVGGVFIFFGGLNVLGLIFVYFFLP 471 (481)
T ss_pred HHHHhcCccceehhHHHHHHHHHHHHheecc
Confidence 9999889999988877666666555544444
No 157
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.16 E-value=1.8e-10 Score=120.74 Aligned_cols=164 Identities=17% Similarity=0.143 Sum_probs=119.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
+.++.+.+..++.......+..++|.|+.+.+|.+..+.+.+.+.+.++..++.++.|+++||..+||+...........
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~ 295 (379)
T TIGR00881 216 KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALI 295 (379)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 45677777777778888888999999999999999999999999999999999999999999852344433322111111
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
...+.... ..+ ..+.....+..++.|+...+..+....+..|.+|++. |+++.+
T Consensus 296 ~~~~~~~~-~~~-------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g 349 (379)
T TIGR00881 296 IVSLLVYW-LNP-------------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA------AGTAAG 349 (379)
T ss_pred HHHHHHHh-cCc-------------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch------hHHHHH
Confidence 11111111 000 0234444455556666555555556678899999998 999999
Q ss_pred hhHHHHhhchhhhhhhhhhhccccccchhH
Q 007736 192 WFFFFISIGSLAAVTVLVYIQDNLGREWGY 221 (591)
Q Consensus 192 ~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f 221 (591)
+++...++|+.++|.+.|.+.+++||+..|
T Consensus 350 ~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 350 FVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 999999999999999999999999998764
No 158
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.15 E-value=1.2e-09 Score=119.07 Aligned_cols=177 Identities=13% Similarity=-0.004 Sum_probs=122.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHH--------
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTI-------- 102 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~-------- 102 (591)
++.+|...+..++....++.+..++|.|+.+.+|.+..+.++..+...++..++.+++|+++||+ ++|+..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~ 338 (465)
T TIGR00894 260 SLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKI 338 (465)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHH
Confidence 45788888999999999999999999999999999999999999999999999999999999996 654211
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhh
Q 007736 103 AIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQE 182 (591)
Q Consensus 103 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 182 (591)
..+......+..+...... . .+.....+...+.+.+.++..+.......|..|+ .
T Consensus 339 ~~~~~~~~~~~~~~~~~~~-~--------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~--- 393 (465)
T TIGR00894 339 FNGIGGLGPGIFAYALPYL-S--------------------AAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-F--- 393 (465)
T ss_pred HHHHHHHHHHHHHHHHHHc-C--------------------CchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-H---
Confidence 1111111111111111100 0 1222333334444444444445555555566654 5
Q ss_pred hhccchhhhhhHHHHhhchhhhhhhhhhhcccc---ccchhHHHHHHHHHHHHHHHH
Q 007736 183 RNQMTNFFNWFFFFISIGSLAAVTVLVYIQDNL---GREWGYGICACAIVFGLVVFL 236 (591)
Q Consensus 183 ~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~---g~~~~f~~~~~~~~~~~~~~~ 236 (591)
++...++.+...++|+.++|.+.|++.+.. +|...|.+.++..+++.++..
T Consensus 394 ---~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 394 ---LGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYL 447 (465)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHee
Confidence 899999999999999999999999987653 378888877766666655443
No 159
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.15 E-value=7e-10 Score=114.32 Aligned_cols=163 Identities=11% Similarity=0.054 Sum_probs=124.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--cCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGT--MHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATV 108 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~ 108 (591)
.+.++..++..++....--++..|++.|+.+. +|++..+.+...+.+..+..++.+++++++||+ |+||++.++..+
T Consensus 139 ~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l 217 (310)
T TIGR01272 139 FTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFL 217 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHH
Confidence 34555555556665556667888999999854 799999999999999999999999999999997 999998888777
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccch
Q 007736 109 QAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTN 188 (591)
Q Consensus 109 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 188 (591)
.+++.++.... +... ...+.++.|++.+..+|...+...+.+|++. ++
T Consensus 218 ~~~~~~l~~~~------------------------~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~-------~~ 265 (310)
T TIGR01272 218 AVLLSIGAALT------------------------HGYV-AMWFVLALGLFNSIMFPTIFSLALNALGRHT-------SQ 265 (310)
T ss_pred HHHHHHHHHHc------------------------CCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------hh
Confidence 77666544432 1111 1234557899999999999999989888654 33
Q ss_pred hhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHH
Q 007736 189 FFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACA 227 (591)
Q Consensus 189 ~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~ 227 (591)
+.++. ....+|+.+.|.+.|.+.|..|.+.+|++..++
T Consensus 266 asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 266 GSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred hHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 33444 456799999999999999999988888765543
No 160
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.14 E-value=4.9e-10 Score=120.27 Aligned_cols=165 Identities=12% Similarity=-0.016 Sum_probs=118.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHH-HHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTG-TMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLT-IAIFATVQ 109 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~-~~~~~~~~ 109 (591)
+.+|...+..++....++++..++|.|+++ ..+.+..+.+...+...++..++.+++|+++||+ |||+. +....++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~ 320 (412)
T TIGR02332 242 PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFA 320 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHH
Confidence 456777788888888999999999999976 3477888889999999999999999999999997 87664 33333333
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchh
Q 007736 110 AAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNF 189 (591)
Q Consensus 110 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 189 (591)
.++.++ .... .+.....++..+.++|.....+.......|.+|+++ |+++
T Consensus 321 ~~~~~~-~~~~-----------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~a 370 (412)
T TIGR02332 321 AAGWLL-ASAT-----------------------DHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQA------RAIA 370 (412)
T ss_pred HHHHHH-HHhc-----------------------CCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHH------HHHH
Confidence 333222 2110 111111222223333333333344455567788888 9999
Q ss_pred hhhhHHHHhhchhhhhhhhhhhccccc-cchhHHHHHHH
Q 007736 190 FNWFFFFISIGSLAAVTVLVYIQDNLG-REWGYGICACA 227 (591)
Q Consensus 190 ~~~~~~~~~ig~~~~p~i~~~l~~~~g-~~~~f~~~~~~ 227 (591)
+++.+...++|++++|.+.|.+.+..| |++.|++.+++
T Consensus 371 ~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 371 IAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 999999999999999999999999875 99988766653
No 161
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.14 E-value=1.6e-10 Score=120.65 Aligned_cols=155 Identities=11% Similarity=0.075 Sum_probs=129.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIA-VNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQA 110 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~-~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~ 110 (591)
+.++......++....++... .+.|.|.++.+|.+..+.+.+.+...++..++.++.|++.||+ |||+.+..+..+.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 288 (365)
T TIGR00900 210 PLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIG 288 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHH
Confidence 445666666666666666666 7788888877999999999999999999999999999999997 99999988877777
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhh
Q 007736 111 AGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFF 190 (591)
Q Consensus 111 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 190 (591)
++..+..... .+.+.+.+..++.|++.+...+...+++.|.+|+++ |++..
T Consensus 289 ~~~~~~~~~~-----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~ 339 (365)
T TIGR00900 289 LAILVVGLTP-----------------------PNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL------LGRVF 339 (365)
T ss_pred HHHHHHHhhc-----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHH
Confidence 7666665541 136667778888999999988899999999999988 99999
Q ss_pred hhhHHHHhhchhhhhhhhhhhccccc
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDNLG 216 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~~g 216 (591)
++++...++|..++|.++|++.+.+|
T Consensus 340 ~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 340 GAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999987654
No 162
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.14 E-value=1.3e-09 Score=113.54 Aligned_cols=178 Identities=13% Similarity=0.069 Sum_probs=145.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQA 110 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~ 110 (591)
.+.++..+...++...+.|...+++.+++++..|++....+++...|.++..++.+++|+++|| +.|+++.....+.+
T Consensus 210 ~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a 287 (394)
T COG2814 210 RPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLA 287 (394)
T ss_pred CchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHH
Confidence 3468889999999999999999999999999999999999999999999999999999999999 68888888877777
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhh
Q 007736 111 AGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFF 190 (591)
Q Consensus 111 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 190 (591)
+..+.+.+.. .+.....+..++.|+...........-.++. -++. +..+.
T Consensus 288 ~~~l~l~~~~-----------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~-~p~~------~~~a~ 337 (394)
T COG2814 288 LALLALTFTG-----------------------ASPALALALLFLWGFAFSPALQGLQTRLARL-APDA------ADLAG 337 (394)
T ss_pred HHHHHHHHhc-----------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhccc-CCCc------hHHHH
Confidence 7776666542 3455555555556666665555555555552 2444 79999
Q ss_pred hhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCC
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTR 240 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 240 (591)
+++....|+|..+|..++|.+.+++|+....++.++..+++.++.+...+
T Consensus 338 sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 338 SLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999888877776655443
No 163
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.14 E-value=5.4e-10 Score=119.14 Aligned_cols=171 Identities=13% Similarity=0.086 Sum_probs=129.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc---CCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTM---HLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQ 109 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~ 109 (591)
.++...+..++....+.....+++.|+.+.+ +.+....+.+.+...+...++.+..|++.||+ |||+.+.++.++.
T Consensus 216 ~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~ 294 (396)
T TIGR00882 216 KFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIM 294 (396)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHH
Confidence 3455555555555555556667888887665 45666778888888888999999999999997 9999999988888
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchh
Q 007736 110 AAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNF 189 (591)
Q Consensus 110 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 189 (591)
+++..+.... .+...+.+..++.+++..........+..+..+++. +++.
T Consensus 295 ~l~~~~~~~~------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~at~ 344 (396)
T TIGR00882 295 SVRIIGSSFA------------------------TTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL------SATI 344 (396)
T ss_pred HHHHHHHHhc------------------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce------EEEe
Confidence 8877665553 356666777888888766555555566777777776 7777
Q ss_pred hhh-hHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHH
Q 007736 190 FNW-FFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVV 234 (591)
Q Consensus 190 ~~~-~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 234 (591)
.+. ++....+|+.++|.++|++.+..||+.+|.+.+++.++..+.
T Consensus 345 ~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 345 YLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred ehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 766 678899999999999999999999999999887766555443
No 164
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.13 E-value=2.8e-09 Score=110.15 Aligned_cols=128 Identities=16% Similarity=0.077 Sum_probs=91.3
Q ss_pred HHHHHHHhhhhcCC---C----hHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHH-HHHHHHHHHHHHHHHHHHHhhcC
Q 007736 52 AVNLVTYLTGTMHL---G----NASAANTVTNFLGTSFMLCLLGGFIADTFLGRYL-TIAIFATVQAAGVTILTISTIIP 123 (591)
Q Consensus 52 ~~~l~~yl~~~~~~---~----~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~-~~~~~~~~~~i~~~l~~~~~~~~ 123 (591)
..++|.|+++..+. + .+..+...++..+..++..|+.|.++|.. |+|| .+-....+..+..+++.++..
T Consensus 35 t~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i~~-- 111 (438)
T COG2270 35 TFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFIPP-- 111 (438)
T ss_pred eehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHhCC--
Confidence 45678888776543 2 24556667778888999999999999997 7555 555555566666667766521
Q ss_pred CCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhh
Q 007736 124 SLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLA 203 (591)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 203 (591)
........+..++..++..+......+++.|..++++ .++..++.+-...+|+.+
T Consensus 112 -------------------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~------~~riS~lg~~~gylgs~i 166 (438)
T COG2270 112 -------------------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN------MGRISGLGWALGYLGSVI 166 (438)
T ss_pred -------------------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc------cCcccccccccccccchH
Confidence 0245555666777888888888899999999999988 677666666667777776
Q ss_pred hhhh
Q 007736 204 AVTV 207 (591)
Q Consensus 204 ~p~i 207 (591)
.-++
T Consensus 167 ~li~ 170 (438)
T COG2270 167 LLIF 170 (438)
T ss_pred HHHH
Confidence 6444
No 165
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.13 E-value=1.1e-09 Score=116.39 Aligned_cols=167 Identities=7% Similarity=-0.033 Sum_probs=131.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
+.++...+..++....+.....+++.|+. +.|.+..+.+.+.+...++..+...+.|++.||+ |+|+.+.++.++.++
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVV 282 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHH
Confidence 45666666677767777777788899986 5899999999999988889999999999999998 999999998888888
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
+.++.+.. ++.+.+++..++.|++.+...+....+..+. ++++ +++..+
T Consensus 283 ~~~~~~~~------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~------~~~~~~ 331 (382)
T PRK11128 283 RWGLMGST------------------------TALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE------VIRLQA 331 (382)
T ss_pred HHHHHHhh------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh------hHHHHH
Confidence 77766654 4677778888899999888888878877775 5555 678888
Q ss_pred hhH-HHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHH
Q 007736 192 WFF-FFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGL 232 (591)
Q Consensus 192 ~~~-~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~ 232 (591)
+++ ....+|..+||.++|.+.|.+|+. .|+..+++.++++
T Consensus 332 ~~~~~~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~~ 372 (382)
T PRK11128 332 LYSALAMGGSIAIMTVLSGFLYQHLGAG-VFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHH
Confidence 865 556678899999999999998874 5555554444443
No 166
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.13 E-value=5.1e-09 Score=112.91 Aligned_cols=162 Identities=17% Similarity=0.194 Sum_probs=116.4
Q ss_pred HHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhh--ch--hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 007736 54 NLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTF--LG--RYLTIAIFATVQAAGVTILTISTIIPSLRPPK 129 (591)
Q Consensus 54 ~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~--~G--rk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~ 129 (591)
-...|+++++|+++++.....+...+ -....++.|.++|.+ .| ||+-++++.++..++.+.++.. |.
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~l-Pw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~---~~----- 81 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASL-PWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALL---PA----- 81 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhC-chHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhc---cc-----
Confidence 34567889999999998876655443 346788999999996 34 4555556666665555555543 21
Q ss_pred CCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhh
Q 007736 130 CNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLV 209 (591)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~ 209 (591)
...+.....+..++..+|.+.......+...|...++... |+...++.+....+|+.++..+.|
T Consensus 82 ------------~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~----~g~lqS~~~~~~~~G~lv~~~l~G 145 (433)
T PF03092_consen 82 ------------SESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES----RGDLQSFVWGVRSVGSLVGSLLSG 145 (433)
T ss_pred ------------ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch----hHHHHHHHHHHHHHHHHHHHHhhh
Confidence 1124555556667778899898899999999988655522 788888888899999999999999
Q ss_pred hhccccccchhHHHHHHHHHHHHHHHHhcCC
Q 007736 210 YIQDNLGREWGYGICACAIVFGLVVFLSGTR 240 (591)
Q Consensus 210 ~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 240 (591)
.+.+..+++..|.+.+++..+..+..+...+
T Consensus 146 ~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 146 PLLDSFGPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred hhhhcCCCeEEehHHHHHHHHHHHHHHHhhh
Confidence 9999999999998887665555444333333
No 167
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.12 E-value=9.4e-09 Score=104.90 Aligned_cols=154 Identities=14% Similarity=0.134 Sum_probs=105.9
Q ss_pred hhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccc
Q 007736 60 TGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCI 139 (591)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 139 (591)
.+++|++..+++.+....+..+.+..++.|.++||+ |||+.-+..++++.++.+.--.
T Consensus 61 Y~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~~--------------------- 118 (354)
T PF05631_consen 61 YESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKHS--------------------- 118 (354)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhc---------------------
Confidence 357999999999999999999999999999999998 9999999998888887764432
Q ss_pred ccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhH-HHHhhchhhhhhhhhhhccccc--
Q 007736 140 QASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFF-FFISIGSLAAVTVLVYIQDNLG-- 216 (591)
Q Consensus 140 ~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~ig~~~~p~i~~~l~~~~g-- 216 (591)
+++..++++|++.|+++....++.-+.....+.++..+. .-.+.-++... +.+.+-++.+..++-++.+..+
T Consensus 119 ----~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~-~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g 193 (354)
T PF05631_consen 119 ----SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQ-EWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFG 193 (354)
T ss_pred ----cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh-HHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCC
Confidence 488999999999999999998877665433332222110 00233333322 2222333444444445555554
Q ss_pred cchhHHHHHHHHHHHHHHHHhcCC
Q 007736 217 REWGYGICACAIVFGLVVFLSGTR 240 (591)
Q Consensus 217 ~~~~f~~~~~~~~~~~~~~~~~~~ 240 (591)
-..+|.....+.+++.+......+
T Consensus 194 ~vaPF~~a~~~l~~~~~~I~~~W~ 217 (354)
T PF05631_consen 194 PVAPFDAAIVLLAVAAVLILKTWP 217 (354)
T ss_pred CcchHHHHHHHHHHHHHHHHhccc
Confidence 477888887776666665544444
No 168
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.12 E-value=1e-09 Score=120.05 Aligned_cols=173 Identities=12% Similarity=0.031 Sum_probs=113.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHH-----HHH--HH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYL-----TIA--IF 105 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~-----~~~--~~ 105 (591)
.+|.+.+..++.....+.+..++|.|+.+++|++..+++.+.+.+.++..++.+++|+++||+ |||+ ... +.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~ 331 (476)
T PLN00028 253 RTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIV 331 (476)
T ss_pred hhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHH
Confidence 456666666666666677788899999988999999999999999999999999999999997 8762 222 22
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhc
Q 007736 106 ATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQ 185 (591)
Q Consensus 106 ~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 185 (591)
.++.++..++.... .+.....+..++.+++.+...+...++..+..| +.
T Consensus 332 ~~l~~i~~~~~~~~------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~------ 380 (476)
T PLN00028 332 QTLGGVFCIWLGRA------------------------NSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RS------ 380 (476)
T ss_pred HHHHHHHHHHhccc------------------------chHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hh------
Confidence 22222222222111 233333444445555544444555566666544 45
Q ss_pred cchhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhc
Q 007736 186 MTNFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSG 238 (591)
Q Consensus 186 r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 238 (591)
++...++.+.+.++|+.++|.+.+ ..+..+|+..|++..++.+++.++.++.
T Consensus 381 ~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 381 LGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred chhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 899999987777777777766543 2234469999988877666666555444
No 169
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.11 E-value=8.6e-10 Score=107.26 Aligned_cols=177 Identities=14% Similarity=0.103 Sum_probs=139.9
Q ss_pred CCCcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHH
Q 007736 21 RPAERSKTGGWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYL 100 (591)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~ 100 (591)
.|..+..+.....+|++.++.++...+.+=....-+.+.++++|+|+.+++.+.+.....+++.+++.|.++||+ ||+-
T Consensus 253 ~pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~ 331 (459)
T KOG4686|consen 253 EPKLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNL 331 (459)
T ss_pred CcccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-ccee
Confidence 344445556677899999999888888777777788899999999999999999999999999999999999998 9987
Q ss_pred HHHHHH-HHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCC
Q 007736 101 TIAIFA-TVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSD 179 (591)
Q Consensus 101 ~~~~~~-~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 179 (591)
..+.+. +....+-..++++ ...-+++..++|+.......+.++.++-..|+++
T Consensus 332 ~wv~~a~~~tl~~H~~l~Ft--------------------------~lsPy~~m~~lGLsysllAcslWP~va~~vpE~q 385 (459)
T KOG4686|consen 332 WWVASACILTLLGHSGLFFT--------------------------FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQ 385 (459)
T ss_pred hhHHHHHHHHHHHhhhHHhh--------------------------hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHH
Confidence 766543 4455555666654 2233566777888887777777888899999998
Q ss_pred hhhhhccchhhhhhHHHHhhchhhhhhhhhhhccccc---cchhHHHHHHHHHH
Q 007736 180 PQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDNLG---REWGYGICACAIVF 230 (591)
Q Consensus 180 ~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g---~~~~f~~~~~~~~~ 230 (591)
.|++++..+...|+|-.+-|+++|.+.++-| |--+|.+....+.+
T Consensus 386 ------LGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL 433 (459)
T KOG4686|consen 386 ------LGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMAL 433 (459)
T ss_pred ------hcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999998765 44445544433333
No 170
>PRK10504 putative transporter; Provisional
Probab=99.10 E-value=1.1e-09 Score=119.61 Aligned_cols=158 Identities=11% Similarity=0.063 Sum_probs=125.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
+.++..+...++.+.++.....+.|.|++..+|.+..+.+++.....++..++.++.|+++||+ |||+++..+..+.++
T Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 339 (471)
T PRK10504 261 RTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLAL 339 (471)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 4556666777777777766667788888878999999999998888888888889999999998 999999988887777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
+..++..... ..+...+.+..++.|++.+...+....+..+.+|+++ ++.+++
T Consensus 340 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~ 392 (471)
T PRK10504 340 VSLLFMLVAL---------------------LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL------ASSGNS 392 (471)
T ss_pred HHHHHHhccc---------------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh------ccchHH
Confidence 7666554310 0233334445666778888878888889999999988 999999
Q ss_pred hhHHHHhhchhhhhhhhhhhcccccc
Q 007736 192 WFFFFISIGSLAAVTVLVYIQDNLGR 217 (591)
Q Consensus 192 ~~~~~~~ig~~~~p~i~~~l~~~~g~ 217 (591)
+.++...+|..+|+.++|.+.+..|+
T Consensus 393 ~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 393 LLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999988766654
No 171
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.10 E-value=1.2e-08 Score=109.87 Aligned_cols=132 Identities=14% Similarity=0.082 Sum_probs=106.7
Q ss_pred HHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHH
Q 007736 78 LGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTA 157 (591)
Q Consensus 78 ~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 157 (591)
.+...+.++..|.++||+ |||..+.+.++...+..+...+. . +.+++ +.+
T Consensus 72 ~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~~~l~~~~~~~~-------------------------~-~~~~~---~~~ 121 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRY-GRKVVLLLPLFGTILPALCLLFQ-------------------------G-YWFFL---LLG 121 (463)
T ss_pred HHHHHHHHhhhHHhhhhh-hhhhhHHHHHHHHHHhHHHHHHH-------------------------H-HHHhh---hcc
Confidence 577889999999999998 99999999998888888777764 2 22222 333
Q ss_pred --hccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHH
Q 007736 158 --LGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVF 235 (591)
Q Consensus 158 --~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 235 (591)
-+.+...+...++++|....++ |...+++.+.....+..++|.+++++.+..|....|.+..+..++..+..
T Consensus 122 l~g~~~~~~s~~~a~vadis~~~~------R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~ 195 (463)
T KOG2816|consen 122 LSGGFSAIFSVGFAYVADISSEEE------RSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYM 195 (463)
T ss_pred cccchhhhhhhhhhheeeccchhH------HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 2444556788899999999998 99999999998999999999999999999999999999988887777766
Q ss_pred HhcCCceeec
Q 007736 236 LSGTRRYRFK 245 (591)
Q Consensus 236 ~~~~~~~~~~ 245 (591)
....++...+
T Consensus 196 ~~~l~Esl~~ 205 (463)
T KOG2816|consen 196 LLFLPESLQE 205 (463)
T ss_pred hhccccccCc
Confidence 6666654433
No 172
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.10 E-value=5e-10 Score=120.81 Aligned_cols=163 Identities=14% Similarity=0.044 Sum_probs=124.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQA 110 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~ 110 (591)
.|.++..++..++...+++....+.+.|.+..++ +..+.+++.....++..++.++.|+++||+ |||+++.++.++.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~ 298 (437)
T TIGR00792 221 NDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMV 298 (437)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHH
Confidence 3456667777777777777766666666665565 456677777788899999999999999998 99999999988888
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChh-hhhccchh
Q 007736 111 AGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQ-ERNQMTNF 189 (591)
Q Consensus 111 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~r~~~ 189 (591)
++.++..+.. .+...+.+..++.+++.+...+..+++++|..|.++.+ ..+.++.+
T Consensus 299 ~~~~~~~~~~-----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 355 (437)
T TIGR00792 299 LGYLIFFFAG-----------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLV 355 (437)
T ss_pred HHHHHHHHcc-----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHH
Confidence 7776665531 24455666777788898888888899999987643211 01127889
Q ss_pred hhhhHHHHhhchhhhhhhhhhhccccccc
Q 007736 190 FNWFFFFISIGSLAAVTVLVYIQDNLGRE 218 (591)
Q Consensus 190 ~~~~~~~~~ig~~~~p~i~~~l~~~~g~~ 218 (591)
++++++...+|..+++.+.|++.+..||.
T Consensus 356 ~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 356 YSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999998877764
No 173
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.09 E-value=1.8e-09 Score=116.05 Aligned_cols=188 Identities=10% Similarity=0.003 Sum_probs=132.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
+..|.+.+.+++...++.++..++|.|+++.++ ............+...+..+++|+|+||+ |++|++.++.+..++
T Consensus 252 ~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i 328 (462)
T PRK15034 252 LHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAI 328 (462)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHH
Confidence 357999999999888888888899999988663 33333334445688899999999999997 999999998887777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCC------------
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSD------------ 179 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~------------ 179 (591)
+........ |. ....++..+.+..+.+.++.|.-..++..++.+.+|++.
T Consensus 329 ~~~~~~l~l--p~----------------~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~ 390 (462)
T PRK15034 329 FSALLFLTL--PG----------------TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDE 390 (462)
T ss_pred HHHHHHHHh--cc----------------ccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchh
Confidence 665443331 21 011355566666555556666666677778888787410
Q ss_pred ---hhhhhccchhhhhhHHHHhhchhhhhhhhhhhccccc-cchhHHHHHHHHHHHHHHHHhcCC
Q 007736 180 ---PQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDNLG-REWGYGICACAIVFGLVVFLSGTR 240 (591)
Q Consensus 180 ---~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~ 240 (591)
.+.+++-+...|+......+|+.+-|.+.|...+..| +...|+...+..+++.++-+....
T Consensus 391 ~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~ 455 (462)
T PRK15034 391 QAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYG 455 (462)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1111236788888889999999999988887776654 888888887777776666555443
No 174
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.09 E-value=4.7e-09 Score=112.30 Aligned_cols=167 Identities=11% Similarity=-0.072 Sum_probs=126.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAG 112 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 112 (591)
.++...+..++.....+....+.|.|+.+.+|++..+.+.......++..++.++.|+++||+ |+|+.+.++.++.+++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g 294 (406)
T PRK15402 216 RFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAG 294 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 455555555566666666677788898888999999999888777788899999999999998 9999999988888888
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhh
Q 007736 113 VTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNW 192 (591)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 192 (591)
..+........ ..+...+.++.++.++|.+...+......... ++++ |++..+.
T Consensus 295 ~~~~~~~~~~~-------------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~------~g~~~~~ 348 (406)
T PRK15402 295 LLLAALATVIS-------------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVS------KGTVSAA 348 (406)
T ss_pred HHHHHHHHHcc-------------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-cccc------ccHHHHH
Confidence 77776542100 02455566777888888887766655554333 4466 9999999
Q ss_pred hHHHHhhchhhhhhhhhhhccccccchhHHHHHH
Q 007736 193 FFFFISIGSLAAVTVLVYIQDNLGREWGYGICAC 226 (591)
Q Consensus 193 ~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~ 226 (591)
+++...+|..+|+.+.+.+.+..++....+...+
T Consensus 349 ~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~ 382 (406)
T PRK15402 349 MGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLA 382 (406)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHH
Confidence 9999999999999999999888776554444443
No 175
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.07 E-value=2.4e-09 Score=115.09 Aligned_cols=152 Identities=15% Similarity=0.018 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 007736 43 CERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTII 122 (591)
Q Consensus 43 ~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~ 122 (591)
+.....+.+..++|.|+++ .|.+..+.+.+.+...++..++.++.|+++||+ |||+.+..+.++.++..++......
T Consensus 242 ~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~~- 318 (426)
T PRK12307 242 SIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRIPQ- 318 (426)
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHcc-
Confidence 3333445567788999875 699999999988899999999999999999998 9999998888776665544433210
Q ss_pred CCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchh
Q 007736 123 PSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSL 202 (591)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ 202 (591)
.....+....+..+++..+..+..+.++.|.+|++. |+++.|+.+...++|+.
T Consensus 319 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~~~~ 371 (426)
T PRK12307 319 ---------------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV------RGLGTGLIYNLAATSGT 371 (426)
T ss_pred ---------------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH------HhhhhhHHHHHHhHHHH
Confidence 111112122222222333334556678899999998 99999999889999999
Q ss_pred hhhhhhhhhccccccchhHHHH
Q 007736 203 AAVTVLVYIQDNLGREWGYGIC 224 (591)
Q Consensus 203 ~~p~i~~~l~~~~g~~~~f~~~ 224 (591)
++|.+.|++.+.+|+....++.
T Consensus 372 ~gp~~~g~l~~~~g~~~~~~~~ 393 (426)
T PRK12307 372 FNSMAATWLGITMGLGAALTFI 393 (426)
T ss_pred HHHHHHHHHHHcccHHHHHHHH
Confidence 9999999999988866543333
No 176
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.07 E-value=2.2e-09 Score=113.91 Aligned_cols=171 Identities=9% Similarity=-0.026 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHH
Q 007736 34 AAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGV 113 (591)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 113 (591)
.+..+...++...+.+....++++|+.+.+|.+..+.+.+.+...++..++.++.|+++||+ |+|+.+.++..+.+++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~ 279 (382)
T PRK10091 201 PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLAL 279 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHH
Confidence 45555555555556666667788888888999999999999999999999999999999997 99999998888877777
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccc-cccCCCCCCChhhhhccchhhhh
Q 007736 114 TILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSG-FGSDQFDDSDPQERNQMTNFFNW 192 (591)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~ 192 (591)
++..... .+.....+..++.++|..+..+.... ...+..+++. ++.+.
T Consensus 280 ~~~~~~~-----------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~-- 328 (382)
T PRK10091 280 LMLFFFG-----------------------GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGEL------LGAAG-- 328 (382)
T ss_pred HHHHHHH-----------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchH------HHHHH--
Confidence 6554321 13333344444555554444433333 3333334333 44433
Q ss_pred hHHHHhhchhhhhhhhhhhccc-cccchhHHHHHHHHHHHHHHHH
Q 007736 193 FFFFISIGSLAAVTVLVYIQDN-LGREWGYGICACAIVFGLVVFL 236 (591)
Q Consensus 193 ~~~~~~ig~~~~p~i~~~l~~~-~g~~~~f~~~~~~~~~~~~~~~ 236 (591)
.+...++|..+||.++|++.+. .+|++.+.+.++..++....+.
T Consensus 329 ~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (382)
T PRK10091 329 GQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLL 373 (382)
T ss_pred HHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHH
Confidence 3566789999999999999885 6899999888766555544433
No 177
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.06 E-value=2.4e-09 Score=113.99 Aligned_cols=174 Identities=14% Similarity=0.013 Sum_probs=125.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH-HHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFL-GTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
.++..+...++...+......+.+.|+.+ .|++.++.+++..... ....++.+++|++.||+ |+|+.+.++..+.++
T Consensus 209 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 286 (390)
T TIGR02718 209 LAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGS 286 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHH
Confidence 35556666677777777777888899875 7999999999888775 46677899999999998 999999887766544
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCC-CChhhhhccchhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDD-SDPQERNQMTNFF 190 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~ 190 (591)
..++...... ... ..+...+....++.+++.+...+...+...+..++ +. +++.+
T Consensus 287 ~~~~~~~~~~-~~~-----------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~g~~~ 342 (390)
T TIGR02718 287 LALLWFAQAA-FWL-----------------APGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQ------AGTDV 342 (390)
T ss_pred HHHHHHHHHH-ccc-----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc------hHHHH
Confidence 3332222110 000 01223333444445556666666777777777765 66 89999
Q ss_pred hhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHH
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGL 232 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~ 232 (591)
++.+...++|..++|.++|++.+..||+..|.+.+++.+++.
T Consensus 343 ~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 343 TAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988888776555544
No 178
>TIGR00895 2A0115 benzoate transport.
Probab=99.05 E-value=1.1e-09 Score=115.67 Aligned_cols=148 Identities=11% Similarity=0.049 Sum_probs=115.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
+..+...+..++....++....++| ++.+++|.+..+.+.+.+...++..++.++.|+++||+ |||+.+..... .++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~-~~~ 326 (398)
T TIGR00895 250 RITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLL-GAV 326 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHH-HHH
Confidence 3445555566677777788888888 66678899999999999999999999999999999998 99855444333 333
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
...++.... .+.....+..++.|++.+...+...+++.|.+|+++ |+++.+
T Consensus 327 ~~~~~~~~~-----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g 377 (398)
T TIGR00895 327 FAVLVGSTL-----------------------FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI------RATGVG 377 (398)
T ss_pred HHHHHHHHh-----------------------hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH------HHHHHH
Confidence 333332211 245556667788899988888999999999999998 999999
Q ss_pred hhHHHHhhchhhhhhhhhhh
Q 007736 192 WFFFFISIGSLAAVTVLVYI 211 (591)
Q Consensus 192 ~~~~~~~ig~~~~p~i~~~l 211 (591)
+.+....+|..++|.++|++
T Consensus 378 ~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 378 WAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHhHHhc
Confidence 99999999999999999876
No 179
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.05 E-value=2.5e-11 Score=133.49 Aligned_cols=159 Identities=11% Similarity=0.148 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 007736 43 CERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTII 122 (591)
Q Consensus 43 ~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~ 122 (591)
+.+....++.....+-+.++++++.+++|++.+.+-++..+..++..+..+|. -|-|.+-+|.++.++|.+++++
T Consensus 13 ~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~l---- 87 (539)
T PF03137_consen 13 LFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFAL---- 87 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhc----
Confidence 33367777777777888999999999999999999999999999999999996 7888889999999999998886
Q ss_pred CCCCCCCCCCC-----------CCCcc-------------------cccchhHHHHHHHHHHHHHhcccccccccccccc
Q 007736 123 PSLRPPKCNLN-----------HGQSC-------------------IQASGMQLVVLYIALYLTALGTGGLKSSVSGFGS 172 (591)
Q Consensus 123 ~~~~~~~~~~~-----------~~~~~-------------------~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~ 172 (591)
|+.-...+.+. +...| ..........++++.++.|+|....++...+|+=
T Consensus 88 Phf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiD 167 (539)
T PF03137_consen 88 PHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYID 167 (539)
T ss_dssp ----------------------------------------------------------------SSS-------------
T ss_pred cHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeec
Confidence 44322111100 01111 1111123466788999999999999999999999
Q ss_pred CCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhc
Q 007736 173 DQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQ 212 (591)
Q Consensus 173 ~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~ 212 (591)
|..++++ -...+|+.+....+|.++|.++++...
T Consensus 168 Dnv~~~~------splYiGi~~~~~~lGPa~Gf~lg~~~L 201 (539)
T PF03137_consen 168 DNVSKKN------SPLYIGILYAMSILGPALGFLLGSFCL 201 (539)
T ss_dssp ----------------------------------------
T ss_pred ccccccc------CccchhhhhHHhhccHHHHHHHHHHHH
Confidence 9999998 788899999999999999988887654
No 180
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.04 E-value=3.5e-08 Score=109.41 Aligned_cols=206 Identities=11% Similarity=0.172 Sum_probs=148.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQA 110 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~ 110 (591)
.+.+..++....+.+..+.++.....+-+.+.++++.++.|++.+.+-++..+...+..|.+-|. =|-|.+-+|.++++
T Consensus 95 ~k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~ 173 (735)
T KOG3626|consen 95 IKMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMG 173 (735)
T ss_pred cchHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHH
Confidence 34455555555555555558888888888999999999999999999999999999999999996 78889999999999
Q ss_pred HHHHHHHHHhhcC--C---C---------------------CCCCCCCCCCCcc-cccchhHH-HHHHHHHHHHHhcccc
Q 007736 111 AGVTILTISTIIP--S---L---------------------RPPKCNLNHGQSC-IQASGMQL-VVLYIALYLTALGTGG 162 (591)
Q Consensus 111 i~~~l~~~~~~~~--~---~---------------------~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~l~g~g~g~ 162 (591)
++.+++++--.+. . . .+..|...+..+. -...+... ..++++.++.|+|...
T Consensus 174 lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tp 253 (735)
T KOG3626|consen 174 LGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATP 253 (735)
T ss_pred HHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCC
Confidence 9999988631000 0 0 0122222222221 11222223 3678899999999999
Q ss_pred ccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccc------------------cc-cchhHHH
Q 007736 163 LKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDN------------------LG-REWGYGI 223 (591)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~------------------~g-~~~~f~~ 223 (591)
.++...+|+=|...+++ -...+|+.+....+|.++|.+++++.... .| |+..|++
T Consensus 254 i~tlGisYiDDnvk~~~------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi 327 (735)
T KOG3626|consen 254 IFTLGISYIDDNVKKKN------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLI 327 (735)
T ss_pred CccCCCccccccccccC------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHH
Confidence 99999999999988888 78899999999999999999888876421 12 5566666
Q ss_pred HHHHHHHHHHHHHhcCCcee
Q 007736 224 CACAIVFGLVVFLSGTRRYR 243 (591)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~ 243 (591)
+..+.++..+.++++.++.+
T Consensus 328 ~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 328 CGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred HHHHHHHHHHHHHhCcccCc
Confidence 66666666655555544433
No 181
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.04 E-value=2.9e-09 Score=113.88 Aligned_cols=173 Identities=15% Similarity=0.169 Sum_probs=114.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH-HHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFL-GTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
.++..++..++.+.+......+.+.|+.+++|++..+.+++.+... .+..++.+++|+++||+ |||+.+.++.++..+
T Consensus 210 ~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l 288 (402)
T PRK11902 210 GAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAV 288 (402)
T ss_pred CHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHH
Confidence 3444445445544443333345566777789999999999876654 56889999999999997 999988877766665
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHH----HHHHhccccccccccccccCCCCCCChhhhhccc
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIAL----YLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMT 187 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 187 (591)
..+........+ .+.+.+.+.. +..+++.+...+....++.+.+|.++ +
T Consensus 289 ~~l~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~- 341 (402)
T PRK11902 289 SNLGYWVLAVTP--------------------KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ------Y- 341 (402)
T ss_pred HHHHHHHHHhcC--------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH------H-
Confidence 544332211101 1333333333 34456666666777777877777554 4
Q ss_pred hhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHH
Q 007736 188 NFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFL 236 (591)
Q Consensus 188 ~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 236 (591)
++++...++|..+++.++|.+.+..||+..|.+.+++.+++.++.+
T Consensus 342 ---~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 342 ---ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 4444445667766667899999999999999988877766655543
No 182
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.02 E-value=2.2e-09 Score=110.98 Aligned_cols=174 Identities=13% Similarity=0.122 Sum_probs=145.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
+++...++..++.+=+.-.+......|-...+|++..+...+....++..+++++++|+|.||+ |-|+++++++++..+
T Consensus 252 ~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~ 330 (438)
T COG2270 252 KNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSI 330 (438)
T ss_pred cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHH
Confidence 4777778888888888888888899999999999999999999999999999999999999997 999999999988877
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
..+...+. .....+.+.-++.|+..|+.++..-++.++.+|+++ -++++|
T Consensus 331 ~~~~~~~~------------------------~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k------~~~fFg 380 (438)
T COG2270 331 AALYLIFL------------------------EGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK------EGRFFG 380 (438)
T ss_pred HHHHHHHc------------------------cccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc------ccceee
Confidence 77666554 234445555577899999999999999999999999 899999
Q ss_pred hhHHHHhhchhhhhhhhhhhccccc-cchhHHHHHHHHHHHHHHHH
Q 007736 192 WFFFFISIGSLAAVTVLVYIQDNLG-REWGYGICACAIVFGLVVFL 236 (591)
Q Consensus 192 ~~~~~~~ig~~~~p~i~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~ 236 (591)
+|++.....+.+||...+.+.+.+| -|..+....++..++++.+.
T Consensus 381 lyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~ 426 (438)
T COG2270 381 LYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLL 426 (438)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEE
Confidence 9999999999999999999988775 55555555555555555443
No 183
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.02 E-value=4.5e-09 Score=110.26 Aligned_cols=153 Identities=12% Similarity=-0.037 Sum_probs=118.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
+.++...+..++....+++...++|.|+++ +|.+..+.+.+.+.+.++..++.++.|+++||+-+||+.+.++.++.++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 275 (355)
T TIGR00896 197 PLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLV 275 (355)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHH
Confidence 445666666667777888888999999975 7999999999999999999999999999999972456677777777777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCC-CChhhhhccchhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDD-SDPQERNQMTNFF 190 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~ 190 (591)
+.+.+.... +.... ...++.|++.+...+...+.+.+..++ ++ +++..
T Consensus 276 ~~~~~~~~~------------------------~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~------~g~~~ 324 (355)
T TIGR00896 276 GLCGLLFAP------------------------MHGLW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQ------AAALS 324 (355)
T ss_pred HHHHHHHhh------------------------hhHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHH------HHHHH
Confidence 776665541 11111 134677899988888777776665544 44 78888
Q ss_pred hhhHHHHhhchhhhhhhhhhhccccc
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDNLG 216 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~~g 216 (591)
++.+...+++..++|.+.|++.++.|
T Consensus 325 ~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 325 AMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 88888888999999999999998876
No 184
>PRK10133 L-fucose transporter; Provisional
Probab=98.99 E-value=8.1e-09 Score=111.78 Aligned_cols=165 Identities=16% Similarity=0.095 Sum_probs=124.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYL-TGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
.++...+..++.....++...+++.|+ ++.+|+++.+.++....+.++..++.+++|++.||+ |||+++..+..+..+
T Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~ 337 (438)
T PRK10133 259 HWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMA 337 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHH
Confidence 344455556666677777778889996 567899999999999999999999999999999997 999999888777666
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
+.++..+. + +. .......+.|++.+..+|...+...+.+|++. +.+.+
T Consensus 338 ~~~~~~~~---~---------------------~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~-------~~as~ 385 (438)
T PRK10133 338 LCLISAFA---G---------------------GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDT-------KYGSS 385 (438)
T ss_pred HHHHHHHc---C---------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhh-------ccchh
Confidence 55544432 1 11 12445677899999999999999999887643 44455
Q ss_pred hhHHHHhhchhhhhhhhhhhccccc-cchhHHHHHHHHHHH
Q 007736 192 WFFFFISIGSLAAVTVLVYIQDNLG-REWGYGICACAIVFG 231 (591)
Q Consensus 192 ~~~~~~~ig~~~~p~i~~~l~~~~g-~~~~f~~~~~~~~~~ 231 (591)
+... ..+|+.++|.+.|.+.+..| -+..|++..++.+..
T Consensus 386 l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~ 425 (438)
T PRK10133 386 FIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVI 425 (438)
T ss_pred HHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 5443 33688889999999999887 678887766554433
No 185
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.99 E-value=7.6e-09 Score=109.21 Aligned_cols=164 Identities=9% Similarity=-0.031 Sum_probs=118.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAG 112 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 112 (591)
.++...+...+....++....+.|.|+++++|.++.+.+.+.+...++..++.++.|+++||+ |||+.+..+..+..++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~ 285 (385)
T TIGR00710 207 MFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVS 285 (385)
T ss_pred hhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 445555555556666777778889999889999999999999999999999999999999997 9999999888887777
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhh
Q 007736 113 VTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNW 192 (591)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 192 (591)
.+++......+ ......+.+..++.|++.+...+.......|..| ++ ++++.++
T Consensus 286 ~~~~~~~~~~~-------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~ 339 (385)
T TIGR00710 286 AVLLEITAILG-------------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HV------AGTASAL 339 (385)
T ss_pred HHHHHHHHHhc-------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-cc------chHHHHH
Confidence 76665542100 0133444555667788888888888888888876 45 8899999
Q ss_pred hHHHHhhchhhhhhhhhhhccccccchhHHH
Q 007736 193 FFFFISIGSLAAVTVLVYIQDNLGREWGYGI 223 (591)
Q Consensus 193 ~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~ 223 (591)
++.....++.+++.+.+.+.+..+|...+..
T Consensus 340 ~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~ 370 (385)
T TIGR00710 340 FGTLRLVLGAIVGYLVSLIHGNTAWPMSLSC 370 (385)
T ss_pred HHHHHHHHHHHHHHHHHhccccChHHHHHHH
Confidence 7777655444444455555554455444433
No 186
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.99 E-value=3.3e-09 Score=116.48 Aligned_cols=172 Identities=13% Similarity=0.080 Sum_probs=144.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAG 112 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 112 (591)
.+..++...++.++....+...+|.+..+.+|.+....|++.+.+.++..++.++.+++.+|+ ++++.+..+.++++++
T Consensus 219 ~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~ 297 (524)
T PF05977_consen 219 PLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALA 297 (524)
T ss_pred HHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHH
Confidence 344444445555555555667789999999999999999999999999999999999999997 9999999898888888
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhh
Q 007736 113 VTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNW 192 (591)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 192 (591)
.+.++++ .+.+..+++.++.|++.........+.+-+..|++. |||.+++
T Consensus 298 ~~~lal~------------------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~------~GRv~si 347 (524)
T PF05977_consen 298 LLLLALS------------------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWV------RGRVFSI 347 (524)
T ss_pred HHHHhcc------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HhHHHHH
Confidence 8888776 477777888888899988888888899999999999 9999999
Q ss_pred hHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHH
Q 007736 193 FFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVF 235 (591)
Q Consensus 193 ~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 235 (591)
+++....+..+|..+.|.+.+.+|-+.++.+.++..+++.++.
T Consensus 348 ~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 348 YQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998888887776555554443
No 187
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.98 E-value=2.4e-09 Score=117.02 Aligned_cols=156 Identities=12% Similarity=0.092 Sum_probs=129.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
+.++...+..++....+++...++|.|+++.+|.+..+.++......++..++.++.|++.||+ |||+.+.++..+.++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~ 333 (485)
T TIGR00711 255 RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAV 333 (485)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHH
Confidence 4566667777788888888899999999999999999999999999999999999999999997 999999998888888
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
+..++..... + +.+...+....++.|+|.+...+.......+.+|+++ |+++.+
T Consensus 334 ~~~~~~~~~~-~-------------------~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~------~g~~~~ 387 (485)
T TIGR00711 334 GFYWRAFTFT-P-------------------DTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHK------IARGSS 387 (485)
T ss_pred HHHHHhccCC-C-------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HhHHHH
Confidence 7776663211 1 0244555566778899988887777777778889888 999999
Q ss_pred hhHHHHhhchhhhhhhhhhhccc
Q 007736 192 WFFFFISIGSLAAVTVLVYIQDN 214 (591)
Q Consensus 192 ~~~~~~~ig~~~~p~i~~~l~~~ 214 (591)
+++...++|+.+|+.+.+.+.++
T Consensus 388 ~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 388 LSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888764
No 188
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.98 E-value=4.9e-09 Score=115.56 Aligned_cols=173 Identities=12% Similarity=0.021 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHH------------HHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHH
Q 007736 40 GEACERLTTLGIAVNLVTYLTGTMHLGNASAAN------------TVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFAT 107 (591)
Q Consensus 40 ~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~------------~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~ 107 (591)
..++..+.+|++..++|.+++ +.|++..+.+. ......++..++.++.++++||+ |||++++++..
T Consensus 296 ~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~~~ 373 (502)
T TIGR00887 296 SWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMGFF 373 (502)
T ss_pred HHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHHHH
Confidence 344556678888888888885 56776442211 12233445566888999999998 99999988887
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccc
Q 007736 108 VQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMT 187 (591)
Q Consensus 108 ~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 187 (591)
+.+++.++.++..... .+...+....+...++..+..+..+.+.+|.+|++. |+
T Consensus 374 ~~~~~~~~l~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~------R~ 427 (502)
T TIGR00887 374 ILTVLFFVLGFAYNHL--------------------STHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY------RS 427 (502)
T ss_pred HHHHHHHHHHHHHHhc--------------------chhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhH------HH
Confidence 7777766665432100 011111111111222223334566778899999999 99
Q ss_pred hhhhhhHHHHhhchhhhhhhhhhhccc----------cccchhHHHHHHHHHHHHHHHHhcCCc
Q 007736 188 NFFNWFFFFISIGSLAAVTVLVYIQDN----------LGREWGYGICACAIVFGLVVFLSGTRR 241 (591)
Q Consensus 188 ~~~~~~~~~~~ig~~~~p~i~~~l~~~----------~g~~~~f~~~~~~~~~~~~~~~~~~~~ 241 (591)
++.++.+....+|++++|.+.+++.+. .++...|++.++..+++.+.. +..++
T Consensus 428 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~-~~lpE 490 (502)
T TIGR00887 428 TAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT-LLIPE 490 (502)
T ss_pred HHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHh-eEecc
Confidence 999999999999999999999998774 234455666655555444433 33444
No 189
>PRK10054 putative transporter; Provisional
Probab=98.98 E-value=4.3e-09 Score=112.35 Aligned_cols=170 Identities=11% Similarity=-0.053 Sum_probs=127.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTG--TMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQ 109 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~ 109 (591)
|.++...+..++....+.....+++.|+.. +.+.+....+.+...+.+.......+.|++.||+ ++|+.+..++.+.
T Consensus 206 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~ 284 (395)
T PRK10054 206 KALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCF 284 (395)
T ss_pred ceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHH
Confidence 445556666666666666666677777653 3455566667777777777777778889999997 9999999998888
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchh
Q 007736 110 AAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNF 189 (591)
Q Consensus 110 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 189 (591)
+++..+..+.. .+.+.+.++.++.++|.+...|...+.+.+..|++. |+++
T Consensus 285 ~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~------~~~~ 335 (395)
T PRK10054 285 VIGLVGFIFSG-----------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM------KASY 335 (395)
T ss_pred HHHHHHHHHcc-----------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc------ceeh
Confidence 88777665431 255556677888899988878888889999999888 8998
Q ss_pred hhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHH
Q 007736 190 FNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGL 232 (591)
Q Consensus 190 ~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~ 232 (591)
++..+ ...+|..+||.++|++.|+.|....|++.+....++.
T Consensus 336 ~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~ 377 (395)
T PRK10054 336 FSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAW 377 (395)
T ss_pred HhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHH
Confidence 88765 5668999999999999999998878777655444333
No 190
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.96 E-value=5.3e-09 Score=115.11 Aligned_cols=154 Identities=9% Similarity=-0.030 Sum_probs=129.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
+.+....+..++....+++...++|.|+++.+|.++.+.+.....+.++..++.++.|++.||+ |||+.+..+.++.++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~ 337 (495)
T PRK14995 259 RIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSAL 337 (495)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 4556666777777788888889999999999999999999999999999999999999999998 999999888888887
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
+..++..... ..+.....+..++.|+|.|...+.......+..|+++ ++.+.+
T Consensus 338 ~~~~l~~~~~---------------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~g~~~~ 390 (495)
T PRK14995 338 SFYGLAMTDF---------------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK------AAAAGA 390 (495)
T ss_pred HHHHHHHhcC---------------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh------cchHHH
Confidence 7766654311 0233445566788899999988888888889999998 999999
Q ss_pred hhHHHHhhchhhhhhhhhhhcc
Q 007736 192 WFFFFISIGSLAAVTVLVYIQD 213 (591)
Q Consensus 192 ~~~~~~~ig~~~~p~i~~~l~~ 213 (591)
++++..++|+.+|+.+.+.+.+
T Consensus 391 ~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 391 IETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998887754
No 191
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.93 E-value=2.4e-08 Score=109.04 Aligned_cols=163 Identities=12% Similarity=0.020 Sum_probs=112.4
Q ss_pred HHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 007736 50 GIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPK 129 (591)
Q Consensus 50 ~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~ 129 (591)
....+.|.+ .+.+|.+.....+......+...++.+++|+++||+ |||+.++.+.++.+++.++++.....+
T Consensus 289 ~~~~~~p~i-~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~~~------ 360 (479)
T PRK10077 289 VVLYYAPEI-FKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFYTQ------ 360 (479)
T ss_pred HHHHHHHHH-HHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHhcC------
Confidence 334444544 456888877777777777888899999999999998 999999999998888887776542100
Q ss_pred CCCCCCCcccccchhHHHHHHHHHHHHHhcccc-ccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhh
Q 007736 130 CNLNHGQSCIQASGMQLVVLYIALYLTALGTGG-LKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVL 208 (591)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~ 208 (591)
.... ....+.++.+++.+. ..+....+++|.+|+++ |+++.++.+...++|..+++.+.
T Consensus 361 -------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~~g~~~~~~~~ 420 (479)
T PRK10077 361 -------------APGI-VALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI------RGKALAIAVAAQWIANYFVSWTF 420 (479)
T ss_pred -------------cccH-HHHHHHHHHHHHHhccccchhHHHhHhhCChhH------HHHHHHHHHHHHHHHHHHHHHHh
Confidence 0111 122233333333332 23667899999999998 99999999888888888886555
Q ss_pred h------hhccccccchhHHHHHHHHHHHHHHHHhcCC
Q 007736 209 V------YIQDNLGREWGYGICACAIVFGLVVFLSGTR 240 (591)
Q Consensus 209 ~------~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 240 (591)
+ ++.+..+|+..|++.++..+++.+..+...+
T Consensus 421 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (479)
T PRK10077 421 PMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVP 458 (479)
T ss_pred HHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccc
Confidence 4 4456788888888877655555554444333
No 192
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.93 E-value=3.1e-08 Score=105.70 Aligned_cols=167 Identities=13% Similarity=0.034 Sum_probs=120.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
+.++...+..++...+.++...++++++.+++|++..+.+.+...+.++..++.++.|++.||. +|+ .+..+..+..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~-~l~~~~~~~~~ 293 (394)
T PRK10213 216 PGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKL-ALAGAPLVLAV 293 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chh-HHHHHHHHHHH
Confidence 3455555555666666667667765555567899999999999999999999999999999995 544 44434344333
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
..+++.... .+.+.+.+..++.|++.+...+...+++.+..|+ + +++..+
T Consensus 294 ~~~~l~~~~-----------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~------~~~~~~ 343 (394)
T PRK10213 294 SALVLTLWG-----------------------SDKIVATGVAIIWGLTFALVPVGWSTWITRSLAD-Q------AEKAGS 343 (394)
T ss_pred HHHHHHHHh-----------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcc-c------HHHHHH
Confidence 333332221 3555666778888999988888888888888874 3 456666
Q ss_pred hhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHH
Q 007736 192 WFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVF 230 (591)
Q Consensus 192 ~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~ 230 (591)
+.....++|..+||.++|++.+..|++..++...+..++
T Consensus 344 ~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~ 382 (394)
T PRK10213 344 IQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLL 382 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHH
Confidence 766777899999999999999999988888877654433
No 193
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.92 E-value=1.9e-08 Score=107.61 Aligned_cols=155 Identities=8% Similarity=-0.010 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 007736 48 TLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRP 127 (591)
Q Consensus 48 ~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~ 127 (591)
+.....++|.|+++..+ ++.+.+++.+...+...+...+.+++.||..+.++.+..+..+.+++..+++..
T Consensus 224 ~~~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~-------- 294 (400)
T PRK11646 224 AVQVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV-------- 294 (400)
T ss_pred HHHHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh--------
Confidence 33445678888876655 667888887777766665555566666654366777777777777777666654
Q ss_pred CCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhh
Q 007736 128 PKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTV 207 (591)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i 207 (591)
++...+.+..++.+++.+...|...+++.+..|+++ |++++++++...++|..+||.+
T Consensus 295 ----------------~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~ig~~l 352 (400)
T PRK11646 295 ----------------SNLQQLFTLICLFYIGSIIAEPARETLSASLADARA------RGSYMGFSRLGLALGGAIGYIG 352 (400)
T ss_pred ----------------hhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc------chhhhhHHHHHHHHHHHhcccc
Confidence 345555566677788888888888999999999999 9999999999999999999999
Q ss_pred hhhhcccc---c-cchhHHHHHHHHHHHHH
Q 007736 208 LVYIQDNL---G-REWGYGICACAIVFGLV 233 (591)
Q Consensus 208 ~~~l~~~~---g-~~~~f~~~~~~~~~~~~ 233 (591)
+|++.++. + ....++...+..+++.+
T Consensus 353 ~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (400)
T PRK11646 353 GGWLFDLGKALNQPELPWMMLGIIGLITLL 382 (400)
T ss_pred hHHHHHHHhhcCCcchHHHHHHHHHHHHHH
Confidence 99998864 2 24445444444444433
No 194
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.90 E-value=8.1e-09 Score=111.61 Aligned_cols=178 Identities=13% Similarity=0.060 Sum_probs=122.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhch-------hHHHHH-
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLG-------RYLTIA- 103 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~G-------rk~~~~- 103 (591)
+.+|.+.+..++.+++++.+..++|+|+.+.+|++..+.|++.++..+...+..+++|+++||... +||.+-
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence 478999999999999999999999999999999999999999999999999999999999999733 122222
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhh
Q 007736 104 IFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQER 183 (591)
Q Consensus 104 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 183 (591)
++....++..+.+++. + |.+ . ......+.++..+.|+..++++ .-..|..| +.
T Consensus 338 i~~~~~ai~l~~l~~~---~------~~~--------~-~~a~~~l~~~~~~~g~~~~Gf~----~~~~~~ap-q~---- 390 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLAFT---S------DEH--------R-LLAVILLTIAIGLSGFNISGFY----KNHQDIAP-QH---- 390 (466)
T ss_pred HHHHHHHHHHHeeeec---C------CCc--------c-hHHHHHHHHHHHHcccchhhhH----hhhhhccc-hH----
Confidence 2233333333333332 1 000 0 0112222222233333333322 22222233 33
Q ss_pred hccchhhhhhHHHHhhchhhhhhhhhhhccc---cccchhHHHHHHHHHHHHHHHHhc
Q 007736 184 NQMTNFFNWFFFFISIGSLAAVTVLVYIQDN---LGREWGYGICACAIVFGLVVFLSG 238 (591)
Q Consensus 184 ~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~---~g~~~~f~~~~~~~~~~~~~~~~~ 238 (591)
-+..+++.+...++.+.++|.+.+.+... ..|+..|++.+...+++.+++.++
T Consensus 391 --a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 391 --AGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 58889999999999999999999999842 369999999998877776655544
No 195
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.90 E-value=1.5e-08 Score=122.94 Aligned_cols=163 Identities=12% Similarity=0.079 Sum_probs=131.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChH-HHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNA-SAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQA 110 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~ 110 (591)
+.++..++..++.....+.+..+++.|+.+.+|++.. +.+++.+...++..++.++.|+++||+ ++++++.++.++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~ 310 (1146)
T PRK08633 232 RVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLA 310 (1146)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHH
Confidence 3455555556666666677788899999999999999 999999999999999999999999997 99998888888777
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhh
Q 007736 111 AGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFF 190 (591)
Q Consensus 111 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 190 (591)
++.+++.+. .+...+++..++.|++.++..+...+++.+.+|++. |++++
T Consensus 311 ~~~~~~~~~------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------rg~~~ 360 (1146)
T PRK08633 311 LSLFLLPTA------------------------PSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE------LGKVL 360 (1146)
T ss_pred HHHHHHHHh------------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc------hhhhh
Confidence 777766654 356666777888899999888888999999999999 99999
Q ss_pred hhhHHHHhhchhhhhhhhhhhcc-ccccchhHHHHH
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQD-NLGREWGYGICA 225 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~-~~g~~~~f~~~~ 225 (591)
++.++..++|..+++.+++.+.. .+++...|++.+
T Consensus 361 ~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~ 396 (1146)
T PRK08633 361 AANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIA 396 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHH
Confidence 99999999999888877776643 134444555443
No 196
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.90 E-value=3.1e-08 Score=106.93 Aligned_cols=164 Identities=18% Similarity=0.130 Sum_probs=135.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQA 110 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~ 110 (591)
.|.+...++..++...+........+.|.+..+|.+ ...+.+.....++..++.++.++++||+ |+|+++..+..+.+
T Consensus 224 nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~ 301 (428)
T PF13347_consen 224 NRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAA 301 (428)
T ss_pred cchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHH
Confidence 356777888888888888888888888888778777 5667777788999999999999999998 99999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChh-hhhccchh
Q 007736 111 AGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQ-ERNQMTNF 189 (591)
Q Consensus 111 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~r~~~ 189 (591)
++.++..+... .+.+.+++..++.|++.+.......++++|..+.++-+ .++..+..
T Consensus 302 ~~~~~~~~~~~----------------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~ 359 (428)
T PF13347_consen 302 LGFLLLFFLGP----------------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMY 359 (428)
T ss_pred HHHHHHHHHHh----------------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHH
Confidence 99988877621 37888888999999999999999999999999865421 12336888
Q ss_pred hhhhHHHHhhchhhhhhhhhhhccccccc
Q 007736 190 FNWFFFFISIGSLAAVTVLVYIQDNLGRE 218 (591)
Q Consensus 190 ~~~~~~~~~ig~~~~p~i~~~l~~~~g~~ 218 (591)
++.+++...++..+++.+.+.+.+..|+.
T Consensus 360 ~s~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 360 FSVNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred HHhhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 88899999999999999999886655543
No 197
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.89 E-value=3.6e-08 Score=104.20 Aligned_cols=166 Identities=14% Similarity=-0.007 Sum_probs=113.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchh---HHHHHH-HHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGR---YLTIAI-FAT 107 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Gr---k~~~~~-~~~ 107 (591)
+.+|.+.+..++....+|++..|+|+|+++ .|++.. .+....+..+.+.++ .++++||. .| |+.... ...
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~-~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIG---VAVIPDRV-ARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHh-hhhhhHHHHHHHHHH
Confidence 567888899999999999999999999965 678764 555555555544444 57888886 54 333332 233
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccc
Q 007736 108 VQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMT 187 (591)
Q Consensus 108 ~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 187 (591)
+.++.....+.. .+.....+...+.+++.....+...++.+|.+|++. |+
T Consensus 266 ~~a~~~~~~~~~------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------rg 315 (368)
T TIGR00903 266 LIAAFFLALAFE------------------------LNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL------HG 315 (368)
T ss_pred HHHHHHHHHHHc------------------------cccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh------cC
Confidence 333333233322 122233334445566666666777889999999999 99
Q ss_pred hhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHH
Q 007736 188 NFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVF 235 (591)
Q Consensus 188 ~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 235 (591)
++.|+.+...++|+.++|.+.+.+.. |.+..|.+.++..+++.+..
T Consensus 316 t~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 316 KAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIA 361 (368)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887763 55666766665555555443
No 198
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.87 E-value=5.4e-09 Score=108.62 Aligned_cols=144 Identities=20% Similarity=0.169 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC-hHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHH
Q 007736 34 AAMILGGEACERLTTLGIAVNLVTYLTGTMHLG-NASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAG 112 (591)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 112 (591)
+|..+...++....+.....++|.|+.+.+|.+ ..+.+.+.+...+...++.++.|+++||+ |+|+...+......++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 286 (352)
T PF07690_consen 208 LWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILG 286 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHH
Confidence 444555556666677788999999999999999 78999999999999999999999999997 9888887777766666
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhh
Q 007736 113 VTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNW 192 (591)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 192 (591)
...+..... ..+........++.|++.+...+...+++.|.+|+++ |+++.++
T Consensus 287 ~~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~ 339 (352)
T PF07690_consen 287 ALGLLLLPF---------------------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY------RGTAFGL 339 (352)
T ss_dssp HHHHCCSHH---------------------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH------HHHHHHH
T ss_pred HHHHHHHHH---------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHH
Confidence 655544321 0245566667778899999999999999999999998 9999999
Q ss_pred hHHHHhhchhhhh
Q 007736 193 FFFFISIGSLAAV 205 (591)
Q Consensus 193 ~~~~~~ig~~~~p 205 (591)
.+...++|+.+||
T Consensus 340 ~~~~~~~~~~igP 352 (352)
T PF07690_consen 340 FNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCC
Confidence 9999999999987
No 199
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.86 E-value=1.1e-08 Score=107.31 Aligned_cols=145 Identities=16% Similarity=0.095 Sum_probs=112.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH-HHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFL-GTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
.++.+.+..++.+.+++....+++.|+++ +|++..+.+.+..... ++..++.+++|+++||+ |||+.+.++.++.++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 287 (356)
T TIGR00901 210 QALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQAL 287 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHH
Confidence 36667777777888889999999999987 9999999998887665 67789999999999998 999999888887777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
+..+......... +|+ ....+.+.+..+.++.+++.+...+...+++.|.+|+++ |++.++
T Consensus 288 ~~~~~~~~~~~~~--------~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g 348 (356)
T TIGR00901 288 TNAGFVWLASNGH--------HDG-----ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF------GATQMA 348 (356)
T ss_pred HHHHHHHHHhcCc--------ccc-----cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc------cHHHHH
Confidence 6665544311000 000 000134556677788899999999999999999999999 999999
Q ss_pred hhHHHHh
Q 007736 192 WFFFFIS 198 (591)
Q Consensus 192 ~~~~~~~ 198 (591)
+++...+
T Consensus 349 ~~~~~~~ 355 (356)
T TIGR00901 349 LLSSLSA 355 (356)
T ss_pred HHHHHHh
Confidence 9877654
No 200
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.85 E-value=1.3e-08 Score=123.30 Aligned_cols=182 Identities=13% Similarity=-0.014 Sum_probs=132.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
+.++..++..++.......+..++|.|+++.+|.+..+.+++.+.+.++..++.++.|+++|++ ++++.+..+.++.++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~ 303 (1140)
T PRK06814 225 KRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGL 303 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHH
Confidence 4667777777777778888889999999999999999999999999999999999999999987 666666555555555
Q ss_pred HHHHHHHHh-hcCCCCCCCCCCCCCCcccc-cchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchh
Q 007736 112 GVTILTIST-IIPSLRPPKCNLNHGQSCIQ-ASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNF 189 (591)
Q Consensus 112 ~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 189 (591)
+.+.+.+.. .... . +..-..... ....+.+.+.++.++.|++.+...+...+++.+.+|++. |+++
T Consensus 304 ~~~~l~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~G~v 371 (1140)
T PRK06814 304 FGLDLAFASSSVPA-E-----PAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH------RARV 371 (1140)
T ss_pred HHHHHHhccccccc-c-----cccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc------ceee
Confidence 444333310 0000 0 000000000 000244566777888899999988889999999999999 9999
Q ss_pred hhhhHHHHhhchhhhhhhhhhhcc-ccccchhHHHHHH
Q 007736 190 FNWFFFFISIGSLAAVTVLVYIQD-NLGREWGYGICAC 226 (591)
Q Consensus 190 ~~~~~~~~~ig~~~~p~i~~~l~~-~~g~~~~f~~~~~ 226 (591)
+|..++..++|..+++++++.+.+ ..++...+++.++
T Consensus 372 ~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~ 409 (1140)
T PRK06814 372 IAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIAL 409 (1140)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 999999999999999999998864 3455555554443
No 201
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.85 E-value=6e-08 Score=102.37 Aligned_cols=149 Identities=7% Similarity=-0.032 Sum_probs=100.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAG 112 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 112 (591)
..+...+..++...+.+....+.|.++.+.+|.+..+.+.+.+...++..++.++.|+++||+ |||+++.++..+..+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~ 273 (377)
T PRK11102 195 RVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIM 273 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHH
Confidence 345555555566666677777778888888999999999999999999999999999999997 9999999888765544
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhh
Q 007736 113 VTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNW 192 (591)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 192 (591)
.+.+......+ .+.+.+.++..+.+.+.+...+.....+.|..| +. ++++.+.
T Consensus 274 ~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~ 326 (377)
T PRK11102 274 GIWLVVSALLD--------------------LGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HM------AGTASSL 326 (377)
T ss_pred HHHHHHHHHHh--------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-cc------chHHHHH
Confidence 33322221000 133333344444444445555555666777766 55 7888888
Q ss_pred hHHH-Hhhchhhhhhhhh
Q 007736 193 FFFF-ISIGSLAAVTVLV 209 (591)
Q Consensus 193 ~~~~-~~ig~~~~p~i~~ 209 (591)
.+.. ..+|..+++++++
T Consensus 327 ~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 327 AGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 5543 3466666666544
No 202
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.83 E-value=2.5e-08 Score=109.14 Aligned_cols=176 Identities=16% Similarity=0.183 Sum_probs=149.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhch--hHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLG--RYLTIAIFATVQ 109 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~G--rk~~~~~~~~~~ 109 (591)
+.++..++...+...+++.-..+++.|.. .++.+..+.+.+.+...+...++.++.|+++|+. . ++.+..+++++.
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 57777888888889999999999999987 8899999999999999999999999999999996 5 344555566666
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchh
Q 007736 110 AAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNF 189 (591)
Q Consensus 110 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 189 (591)
+++.+.+.+. .++..+...-++.|+..|.........+.|+.+.++ -..+
T Consensus 376 gl~~~~~p~~------------------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~------l~~a 425 (509)
T KOG2504|consen 376 GLARLFLPFA------------------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK------LSNA 425 (509)
T ss_pred HHHHHHHHHh------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh------cchH
Confidence 6666566655 477788888888999999998888889999999999 9999
Q ss_pred hhhhHHHHhhchhhhhhhhhhhccccc-cchhHHHHHHHHHHHHHHHHhcC
Q 007736 190 FNWFFFFISIGSLAAVTVLVYIQDNLG-REWGYGICACAIVFGLVVFLSGT 239 (591)
Q Consensus 190 ~~~~~~~~~ig~~~~p~i~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~ 239 (591)
+|+...+..++..+||.++|++.|..| |...|+.+.++.+++.+..++..
T Consensus 426 ~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 426 YGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 999999999999999999999999887 99999999888777765554443
No 203
>PRK09848 glucuronide transporter; Provisional
Probab=98.82 E-value=1.5e-08 Score=109.90 Aligned_cols=163 Identities=15% Similarity=0.138 Sum_probs=124.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
|.++...+..++...+++......+.|+++.+|.+....++......++..++.++.++++||+ |+|+++.++.++.++
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i 306 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTC 306 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4566666777777777777777778888888888766655555555677888999999999998 999999999988888
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhh-hhccchhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQE-RNQMTNFF 190 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~ 190 (591)
+.+++.+. +. .+.+.+++..++.++|.+...+...++.+|..|.++.+. .+.++..+
T Consensus 307 ~~~~~~~~---~~-------------------~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~ 364 (448)
T PRK09848 307 GYLLFFWV---SV-------------------WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTY 364 (448)
T ss_pred HHHHHHHc---Cc-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHH
Confidence 87766653 10 355666677788899999999999999999887654210 11258888
Q ss_pred hhhHHHHhhchhhhhhhhhhhcccccc
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDNLGR 217 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~~g~ 217 (591)
+.+++...+|..+|+.+.+.+.+..||
T Consensus 365 ~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 365 SLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999887665555
No 204
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.82 E-value=2e-07 Score=98.79 Aligned_cols=140 Identities=14% Similarity=0.238 Sum_probs=105.1
Q ss_pred cchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhh
Q 007736 387 FFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVF 466 (591)
Q Consensus 387 ~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 466 (591)
..-.+-+.+-++..+++ +|.+ ..+.+.+|+.+..+-++.++.++ ++|
T Consensus 414 ~~~~gEI~~~ffs~klI----~kiG-------Hv~v~~lgLa~~~~Rf~~~S~L~----------------------n~W 460 (618)
T KOG3762|consen 414 LCHAGEILFYFFSFKLI----EKIG-------HVNVMYLGLACNVGRFLYYSYLQ----------------------NPW 460 (618)
T ss_pred hhccchHHHHHHHHHHH----HHhc-------ccceeeehhhHHHHHHHHHHHhc----------------------Cch
Confidence 33344444444444555 5533 33557889999988888888763 667
Q ss_pred HHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHH-HHHHHHHHHHHHHHhhcccCCCCCccccccCCcchH
Q 007736 467 WLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLST-LSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLY 545 (591)
Q Consensus 467 ~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~-~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~ 545 (591)
.+++.-++.|+..++...+..+|+...+|++.+++++|+.... ..+|-.+|++++|.+.+..+ ..
T Consensus 461 ~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg--------------~~ 526 (618)
T KOG3762|consen 461 MVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG--------------AR 526 (618)
T ss_pred heeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh--------------hH
Confidence 7777889999999999999999999999999999999999955 69999999999999886543 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccc
Q 007736 546 DFYWLLAILSALNFVIYLAFARWYVYKD 573 (591)
Q Consensus 546 ~~f~~~~~~~~v~~~~~~~~~~~~~~~~ 573 (591)
..|+.+++.|++..+....+-+..+++.
T Consensus 527 ttf~~~giAcl~~l~~~~~iq~~l~~~~ 554 (618)
T KOG3762|consen 527 TTFRIFGIACLVTLALFISIQLLLKRRG 554 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccc
Confidence 5788888888888776666555444443
No 205
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.81 E-value=1.1e-07 Score=101.37 Aligned_cols=161 Identities=8% Similarity=-0.070 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhh
Q 007736 42 ACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTI 121 (591)
Q Consensus 42 ~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~ 121 (591)
++...........++.|+++.+|.+..+.+.+.+...++..+++++.|++.||+ ++++.+..+.. .++...+....
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~-~~~~~~~~~~~-- 290 (393)
T PRK11195 215 TLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGIL-MGLVVLLMALQ-- 290 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHH-HHHHHHHHHHH--
Confidence 334445555666778888888999999999999999999999999999999997 88888877753 33333333332
Q ss_pred cCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhch
Q 007736 122 IPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGS 201 (591)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 201 (591)
.+.+...+..++.|++.+...++..+.+.+..|++.. ++++.+..++..++|.
T Consensus 291 ----------------------~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~-----~g~~~a~~~~~~~~~~ 343 (393)
T PRK11195 291 ----------------------HSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVG-----AGHSIAVQNFNENLAM 343 (393)
T ss_pred ----------------------hHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCccccc-----chhHHHHHhHHHHHHH
Confidence 3455556667788888888887788888776444321 6899999999999999
Q ss_pred hhhhhhhhhhccccccchhHHHHHHHHHHHHHH
Q 007736 202 LAAVTVLVYIQDNLGREWGYGICACAIVFGLVV 234 (591)
Q Consensus 202 ~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 234 (591)
.++..+.+.+ +..|-+..+++..+..+++...
T Consensus 344 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK11195 344 LLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAM 375 (393)
T ss_pred HHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHH
Confidence 9999888855 5678777777766655554443
No 206
>PRK11043 putative transporter; Provisional
Probab=98.80 E-value=1.4e-07 Score=100.71 Aligned_cols=156 Identities=10% Similarity=-0.065 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHH
Q 007736 35 AMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVT 114 (591)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~ 114 (591)
+...+...+....++....++|.|++ ++|.+..+.++......++..++..+.+++.||+ |+|+.+.......+++.+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~ 283 (401)
T PRK11043 206 LGNVLIFAACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVI 283 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHH
Confidence 33333444445566666777888875 5799999999888888888899999999999997 999987666655555544
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhH
Q 007736 115 ILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFF 194 (591)
Q Consensus 115 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 194 (591)
.+......+ ..+...+.+...+.+++.+...+...+...|..| ++ ++++.++++
T Consensus 284 ~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~g~~~ 337 (401)
T PRK11043 284 AIWLASLLS-------------------HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QA------TGKAAALQN 337 (401)
T ss_pred HHHHHHHhc-------------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-cc------ChHHHHHHH
Confidence 333221100 0234445555667788888888888777777765 46 899999999
Q ss_pred HHHhhchhhhhhhhhhhccccccc
Q 007736 195 FFISIGSLAAVTVLVYIQDNLGRE 218 (591)
Q Consensus 195 ~~~~ig~~~~p~i~~~l~~~~g~~ 218 (591)
.....++..++.+.+.+.+.....
T Consensus 338 ~~~~~~~~~~~~~~g~l~~~~~~~ 361 (401)
T PRK11043 338 TLQLGLCFLASLLVSALISTPLLT 361 (401)
T ss_pred HHHHHHHHHHHHHHHHccCCChhH
Confidence 888888888888888887644333
No 207
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.78 E-value=1.5e-07 Score=100.09 Aligned_cols=79 Identities=14% Similarity=0.038 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHH
Q 007736 40 GEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTIS 119 (591)
Q Consensus 40 ~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~ 119 (591)
...+..........+.|.|+++++|++..+.+.+.+...++..++.++.|++.||+ |||+.+.++..+..++.+++.+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~ 289 (392)
T PRK10473 211 ITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALS 289 (392)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333444555667788888999999999999889999999999999999997 99999999988888887777664
No 208
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.76 E-value=1.3e-07 Score=103.41 Aligned_cols=165 Identities=12% Similarity=0.038 Sum_probs=117.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
|.++.+++..++.....+......+.|.+...+ +....+.+.+...++..++.++.++++||+ |+|+++.++..+.++
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 566667777777777777666666655444443 455666666666688889999999999998 999999988887776
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChh-hhhccchhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQ-ERNQMTNFF 190 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~ 190 (591)
+.+........+ ..+...+.+..++.+++.+...+...++++|..|.++-+ .++..+..+
T Consensus 309 ~~~~~~~~~~~~-------------------~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~ 369 (473)
T PRK10429 309 SCGVLLLMGLAA-------------------PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAY 369 (473)
T ss_pred HHHHHHHHhccC-------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHH
Confidence 665554321101 034555666667788888888888899999997754311 111145578
Q ss_pred hhhHHHHhhchhhhhhhhhhhcccccc
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDNLGR 217 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~~g~ 217 (591)
+...+..-+|..+++.+.|++.+..|+
T Consensus 370 s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 370 SVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 889999999999999999988776665
No 209
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.74 E-value=2.3e-07 Score=98.92 Aligned_cols=180 Identities=10% Similarity=0.040 Sum_probs=134.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
+.+...++..++.+.+.-....+.+.|+++.-+.+....+.+.++..++=.+.....+++..|+ |-|+++.++.+..++
T Consensus 207 ~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~v 285 (400)
T PF03825_consen 207 PRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAV 285 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHH
Confidence 3455666677777777777788889998754447777778777777788888888999999997 999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
=..+.+.... |. ............+.|+..+........++.+..|++. |+++.+
T Consensus 286 R~~l~a~~~~-~~------------------~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~------~at~Q~ 340 (400)
T PF03825_consen 286 RWLLYAYFSD-PW------------------PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL------RATAQG 340 (400)
T ss_pred HHHHHHHhcC-Cc------------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc------hHHHHH
Confidence 8888877521 00 0112223344567899999999999999999999999 999999
Q ss_pred hhHH-HHhhchhhhhhhhhhhccccccch------hHHHHHHHHHHHHHHHHh
Q 007736 192 WFFF-FISIGSLAAVTVLVYIQDNLGREW------GYGICACAIVFGLVVFLS 237 (591)
Q Consensus 192 ~~~~-~~~ig~~~~p~i~~~l~~~~g~~~------~f~~~~~~~~~~~~~~~~ 237 (591)
+++. ...+|..+|..++|++.|++|-+. .+.+.++..++..+.++.
T Consensus 341 l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~ 393 (400)
T PF03825_consen 341 LYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVI 393 (400)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 9665 467999999999999999877443 344444444444444443
No 210
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.73 E-value=2.5e-06 Score=91.01 Aligned_cols=103 Identities=17% Similarity=0.129 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHH
Q 007736 74 VTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIAL 153 (591)
Q Consensus 74 ~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (591)
.++-.....+.+++.+.+.|+. |.|..+.++...+.+-.+..-. .|-..++.+-
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i-~~K~~lv~ga~~y~~f~~gfl~-------------------------~N~y~~yfss 109 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFL-GPKWALVIGATCYAAFPLGFLF-------------------------PNSYYLYFSS 109 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHh-hHHHHHHHHhHHHHHHHHHHHh-------------------------cchHHHHHHH
Confidence 5566677889999999999997 9999999998877765554443 3777889999
Q ss_pred HHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhh
Q 007736 154 YLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVL 208 (591)
Q Consensus 154 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~ 208 (591)
+++|+|.+..+...-.+++++..++. +.+..++.......+..+|..+.
T Consensus 110 allG~Gaallw~GqG~ylt~~st~~t------ie~Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 110 ALLGFGAALLWTGQGGYLTSNSTRET------IERNISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred HHhhhhHHheecccceehhhcCChhh------HHHHHHHHHHHHHHHHHhhhHhh
Confidence 99999999999999999999988887 77777776666666666664443
No 211
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.73 E-value=8.3e-08 Score=103.05 Aligned_cols=190 Identities=12% Similarity=0.103 Sum_probs=138.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQA 110 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~ 110 (591)
++.+.+.+...++.++..-.......+.+-++-|++..++.++.........+..+++.++.||+ |||+.++++..+..
T Consensus 268 R~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~~~ 346 (485)
T KOG0569|consen 268 RRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSLMA 346 (485)
T ss_pred hHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHH
Confidence 34566777777777777766677777777788899999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHH-HHHHHH--HHhccccccccccccccCCCCCCChhhhhccc
Q 007736 111 AGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVL-YIALYL--TALGTGGLKSSVSGFGSDQFDDSDPQERNQMT 187 (591)
Q Consensus 111 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l--~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 187 (591)
+..+++.....+... .+.....+ +++.++ ..++.| ..|..+-+.+|++|++. |.
T Consensus 347 ~~~~~~~~~~~l~~~----------------~~~~~~y~~i~~~~~~~~~f~~G-~gpi~~fi~aELf~~~~------R~ 403 (485)
T KOG0569|consen 347 VALLLMSIALFLSNS----------------FGSWLSYLCIAAIFLFIISFAIG-PGPIPWFIGAELFPQSA------RS 403 (485)
T ss_pred HHHHHHHHHHHHHHH----------------hhhHHHHHHHHHHHHHHHhhhcC-CCchhHHHHHHhCCccc------hH
Confidence 888887776543210 00001111 222222 233333 24788899999999999 99
Q ss_pred hhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCceeec
Q 007736 188 NFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYRFK 245 (591)
Q Consensus 188 ~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 245 (591)
.++++......+...+.......+.+..|- ..|.+.++..++..+..+...||.+.+
T Consensus 404 aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr 460 (485)
T KOG0569|consen 404 AAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGR 460 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCC
Confidence 999998888888887777777777777775 556666665556666666666765544
No 212
>TIGR00898 2A0119 cation transport protein.
Probab=98.72 E-value=6.7e-08 Score=106.48 Aligned_cols=129 Identities=9% Similarity=-0.009 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHH
Q 007736 75 TNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALY 154 (591)
Q Consensus 75 ~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (591)
....+...++.++.++++||+ |||+.+.++.++.+++.+++.+... .......+..+
T Consensus 362 ~~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~~~----------------------~~~~~~~~~~~ 418 (505)
T TIGR00898 362 FISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFVPV----------------------DLYFLRTALAV 418 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHcCC----------------------CchHHHHHHHH
Confidence 344567778899999999997 9999999998888887776665411 11223333344
Q ss_pred HHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHH
Q 007736 155 LTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVV 234 (591)
Q Consensus 155 l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 234 (591)
+.+++.+...+....+.+|.+|++. |++++++.+....+|++++|.+.+ +. ..++..++++.+...+++.+.
T Consensus 419 ~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~~~~~~~~~~ 490 (505)
T TIGR00898 419 LGKFGITSAFQMVYLYTAELYPTVV------RNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFGGLALLAGIL 490 (505)
T ss_pred HHHHHHHHHHHHHHHHhcccccHHH------HhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHHHHHHHHHHH
Confidence 4555666666778899999999998 999999999999999999999988 43 345556666655544444333
No 213
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.71 E-value=4.8e-07 Score=91.92 Aligned_cols=166 Identities=14% Similarity=0.007 Sum_probs=132.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAG 112 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 112 (591)
..|.+.+-..+++..+|.+..|+|.++. +.|+|..++|...+...+.+...++..-++++|...+|+.......++.+|
T Consensus 209 ~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G 287 (395)
T COG2807 209 LAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVG 287 (395)
T ss_pred hhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence 4577777777899999999999999987 579999999999999999999999999999998757888888888888888
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhh
Q 007736 113 VTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNW 192 (591)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 192 (591)
.+-+.+. |. ...... .+++|+|.|+.++....++.+..++.+. -++..++
T Consensus 288 ~~G~~~~---P~-------------------~~~~lw---~~llG~G~G~~F~laL~li~~rs~~a~~-----Aa~LSgm 337 (395)
T COG2807 288 LVGLLLA---PG-------------------QLPILW---ALLLGLGQGGAFPLALTLILLRSSDAAI-----AAALSGM 337 (395)
T ss_pred HHHHHHh---hh-------------------hHHHHH---HHHHhCccchHHHHHHHHHHhhcCChHH-----HHHHHHH
Confidence 8877765 21 122222 4889999999999999999988765441 5566666
Q ss_pred hHHHHhhchhhhhhhhhhhccccc-cchhHHHHHHHHH
Q 007736 193 FFFFISIGSLAAVTVLVYIQDNLG-REWGYGICACAIV 229 (591)
Q Consensus 193 ~~~~~~ig~~~~p~i~~~l~~~~g-~~~~f~~~~~~~~ 229 (591)
.+-...+=+.+||.+.|++.|..| |+.+++..+.+.+
T Consensus 338 aQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i 375 (395)
T COG2807 338 AQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATL 375 (395)
T ss_pred hhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHH
Confidence 666666778889999999998875 8777665554433
No 214
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.69 E-value=2.8e-07 Score=93.29 Aligned_cols=170 Identities=12% Similarity=0.047 Sum_probs=110.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhh--hhc-----------------CCChHHHHHHHHHHHHHHHHHHhhhHHHh
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLT--GTM-----------------HLGNASAANTVTNFLGTSFMLCLLGGFIA 92 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~--~~~-----------------~~~~~~~~~~~~~~~~~~~i~~~~~G~la 92 (591)
+........-|.++..||++.-......+ +.+ ..+...--.-.-+..+..+.+.++.|++.
T Consensus 326 kttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iv 405 (528)
T KOG0253|consen 326 KTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIV 405 (528)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHH
Confidence 34455555666778888887644332221 111 11222111122344577889999999999
Q ss_pred hhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhcccccccccccccc
Q 007736 93 DTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGS 172 (591)
Q Consensus 93 D~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~ 172 (591)
||+ |||+++...++++++..+++..... + . .....++.+|++.. +.+.+.+.|..
T Consensus 406 erl-GRKkTMal~l~~f~iflfll~~c~~-r------------------n-~~tvllf~arafis----g~fqvaYvYtP 460 (528)
T KOG0253|consen 406 ERL-GRKKTMALSLILFGIFLFLLTTCKT-R------------------N-AYTVLLFTARAFIS----GAFQVAYVYTP 460 (528)
T ss_pred HHh-cchhHHHHHHHHHHHHHHHHHHhcC-c------------------c-hhHHHHHHHHHHHh----chheEEEEecC
Confidence 996 9999999999999998887776421 0 0 13344567777554 33456789999
Q ss_pred CCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHH
Q 007736 173 DQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVV 234 (591)
Q Consensus 173 ~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 234 (591)
|.+|... |+.+.|....+..+|+++.|.++ ...+..-.-..+...++ .+++.+.
T Consensus 461 EVyPTav------RatgvGtcSsmaRIggI~~p~iA-~~~e~s~sl~i~vy~~~-~ilagIa 514 (528)
T KOG0253|consen 461 EVYPTAV------RATGVGTCSSMARIGGIFSPVIA-MRAELSTSLPIFVYGAL-FILAGIA 514 (528)
T ss_pred cccchhh------hhcchhhhhhHHhhhhhhhhHHH-HHhccceeehHHHHHHH-HHHHHHH
Confidence 9999999 99999999999999999999988 33333223334443333 3334333
No 215
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.69 E-value=1.2e-07 Score=99.46 Aligned_cols=141 Identities=13% Similarity=0.081 Sum_probs=104.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAG 112 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 112 (591)
.++...+..++.....+.+..+++.|+++.+|.+..+.+.+.+...+...++.+++|+++||+ |||+.+..+....+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~ 304 (366)
T TIGR00886 226 HTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMG 304 (366)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHH
Confidence 456666666666667778889999999999999999999999999999999999999999998 9998888777766666
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhh
Q 007736 113 VTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNW 192 (591)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 192 (591)
..++.+... + ..+.....+...+.+++.|...+...+++++.+| ++ +++..|+
T Consensus 305 ~~~~~~~~~-~-------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~------~g~~~g~ 357 (366)
T TIGR00886 305 AFLVVLGLV-S-------------------PLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RA------TGAVSGL 357 (366)
T ss_pred HHHHHhcCC-C-------------------cchHHHHHHHHHHHHHHhccccchhhhcchhhch-hh------cccHHHH
Confidence 655554311 0 0034444444445555555555667777888877 45 8999999
Q ss_pred hHHHHhhch
Q 007736 193 FFFFISIGS 201 (591)
Q Consensus 193 ~~~~~~ig~ 201 (591)
.+...++|+
T Consensus 358 ~~~~~~~g~ 366 (366)
T TIGR00886 358 VGAIGNLGG 366 (366)
T ss_pred HHHhccCCC
Confidence 888877763
No 216
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.63 E-value=2.4e-07 Score=97.64 Aligned_cols=179 Identities=12% Similarity=0.060 Sum_probs=142.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC---CChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGTMH---LGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFAT 107 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~ 107 (591)
.|++|.+.+........|+..-.-.+.|.+..++ .++...|.+.+...+.-++...+..++-+|+ |.|+.++++..
T Consensus 219 ~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag~ 297 (412)
T PF01306_consen 219 MRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAGV 297 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHHH
Confidence 4567777776666666666665567888775443 4556678888888888899999999999997 99999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccc
Q 007736 108 VQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMT 187 (591)
Q Consensus 108 ~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 187 (591)
+..+=..+++++ .+.+.+.+...+.++-.+........++++.+|++. .+
T Consensus 298 i~~iRi~~~~~~------------------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl------sA 347 (412)
T PF01306_consen 298 IMAIRIIGSGFA------------------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL------SA 347 (412)
T ss_dssp HHHHHHHHHHT--------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG------HH
T ss_pred HHHHHHHHHhhh------------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH------HH
Confidence 999999998887 478889999999999999999999999999999988 77
Q ss_pred hhhhh-hHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCC
Q 007736 188 NFFNW-FFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTR 240 (591)
Q Consensus 188 ~~~~~-~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 240 (591)
+...+ ++.+..+|..+.+.++|.+.|+.|++..|++.+..+++..++-++..+
T Consensus 348 t~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 348 TLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeec
Confidence 78877 578888999999999999999999998888777666555555444444
No 217
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.63 E-value=5.4e-07 Score=96.69 Aligned_cols=164 Identities=10% Similarity=-0.024 Sum_probs=117.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGT-MHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
..+...+..++......+..++++.|+.+. .+.+....+...+.+..+..++.+++|+++||+ ++||++.+...+.++
T Consensus 233 ~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~ 311 (410)
T TIGR00885 233 HYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMA 311 (410)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHH
Confidence 345555556665555556778899998653 244555555566777788899999999999997 999998888777777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
..++.... .+. ......++.+++.+..+|...+...+..+++. ......
T Consensus 312 ~~ll~~~~------------------------~~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~------~~~s~~ 360 (410)
T TIGR00885 312 LCLGSIFA------------------------GGH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDT------KYGAAG 360 (410)
T ss_pred HHHHHHHc------------------------CCh-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------hhhHHH
Confidence 66666653 121 22455667788888888999999999998775 443444
Q ss_pred hhHHHHhhchhhhhhhhhhhcccc------ccchhHHHHHHHHHH
Q 007736 192 WFFFFISIGSLAAVTVLVYIQDNL------GREWGYGICACAIVF 230 (591)
Q Consensus 192 ~~~~~~~ig~~~~p~i~~~l~~~~------g~~~~f~~~~~~~~~ 230 (591)
+.. ..+|+++.|.+.|++.|.. +.+.+|+++.++.+.
T Consensus 361 l~~--~~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~ 403 (410)
T TIGR00885 361 LVM--AIIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAV 403 (410)
T ss_pred HHH--HHhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHH
Confidence 433 2399999999999999954 477888887765443
No 218
>PRK09669 putative symporter YagG; Provisional
Probab=98.59 E-value=2.8e-07 Score=99.99 Aligned_cols=162 Identities=11% Similarity=0.016 Sum_probs=109.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTG-TMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQA 110 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~ 110 (591)
+.++.++...++...+...... +..|..+ .++ +....+.+.....+...++.++.++++||+ |+|+.+.++.++.+
T Consensus 229 ~~~~~l~~~~~~~~~~~~~~~~-~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~ 305 (444)
T PRK09669 229 SQWRIMFIFNVVLLTAVVTRGG-ATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFV 305 (444)
T ss_pred chHHHHHHHHHHHHHHHHHHhh-hhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHH
Confidence 3445555555554444443333 3344433 333 233334455556677888899999999998 99999998877665
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChh-hhhccchh
Q 007736 111 AGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQ-ERNQMTNF 189 (591)
Q Consensus 111 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~r~~~ 189 (591)
+..+...+.. + .+...+++..++.|++.+...+..+++++|..|.++.+ .++..+..
T Consensus 306 ~~~~~~~~~~--~--------------------~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~ 363 (444)
T PRK09669 306 ILSALIFFIP--P--------------------SNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLV 363 (444)
T ss_pred HHHHHHHHhC--c--------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHH
Confidence 5443333221 1 35666777778899999999999999999998754421 11224667
Q ss_pred hhhhHHHHhhchhhhhhhhhhhccccccc
Q 007736 190 FNWFFFFISIGSLAAVTVLVYIQDNLGRE 218 (591)
Q Consensus 190 ~~~~~~~~~ig~~~~p~i~~~l~~~~g~~ 218 (591)
++.++++..+|.++|+.++|.+.+..|+.
T Consensus 364 ~s~~~~~~klg~alg~~i~g~ll~~~Gy~ 392 (444)
T PRK09669 364 FSTNLFAIKLGLAIGGAVVGWILAWVDYV 392 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 88899999999999999999988777663
No 219
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.57 E-value=2.8e-07 Score=89.25 Aligned_cols=148 Identities=20% Similarity=0.228 Sum_probs=92.3
Q ss_pred HHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCC
Q 007736 56 VTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHG 135 (591)
Q Consensus 56 ~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~ 135 (591)
..|+.+.+++...+++.+....+....+...+.|-|+||- ||||.-.. +.+...++.+.-+.
T Consensus 60 vYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvt----ycitYiLsCiTKhS------------- 121 (454)
T KOG4332|consen 60 VYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVT----YCITYILSCITKHS------------- 121 (454)
T ss_pred eeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceee----ehHHHHHHHHhhcC-------------
Confidence 4567778899999999887777777888889999999997 99996554 34444455444322
Q ss_pred CcccccchhHHHHHHHHHHHHHhccccccccccc-cccCCCCCCChhhhhccchhhhh-hH----HHHhhchhhhhhhhh
Q 007736 136 QSCIQASGMQLVVLYIALYLTALGTGGLKSSVSG-FGSDQFDDSDPQERNQMTNFFNW-FF----FFISIGSLAAVTVLV 209 (591)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~-~~----~~~~ig~~~~p~i~~ 209 (591)
+++-.++++|++-|+..+...+..-+ +++|+.+++.. -....+. +. ++..+-++++.+.+-
T Consensus 122 --------pqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~F-----eqqWls~TFskA~ffgNglvAiiaGlfgn 188 (454)
T KOG4332|consen 122 --------PQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGF-----EQQWLSVTFSKAVFFGNGLVAIIAGLFGN 188 (454)
T ss_pred --------CceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCC-----hHhhhhHHHHHHHHhhccHHHHHHHHHHH
Confidence 46778899999999999888766644 45666544432 1111111 11 122222333333344
Q ss_pred hhcccc--ccchhHHHHHHHHHHHHHH
Q 007736 210 YIQDNL--GREWGYGICACAIVFGLVV 234 (591)
Q Consensus 210 ~l~~~~--g~~~~f~~~~~~~~~~~~~ 234 (591)
.+.+.+ |--.+|-..++...++..+
T Consensus 189 ~lvd~~slGPVAPFdAAacfLaigmAv 215 (454)
T KOG4332|consen 189 LLVDTFSLGPVAPFDAAACFLAIGMAV 215 (454)
T ss_pred HHHHHhccCCCCchHHHHHHHHHHHHH
Confidence 455554 4555666665555555444
No 220
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.50 E-value=2.4e-06 Score=90.86 Aligned_cols=144 Identities=11% Similarity=-0.015 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 007736 46 LTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSL 125 (591)
Q Consensus 46 ~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~ 125 (591)
.+........+.|+++.+|.+..+.+++......+..++..+.+++.||+ |++... +.....++.++........
T Consensus 221 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~-- 295 (394)
T PRK11652 221 AGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQ--SVICCLLAGLLMWIPGWFG-- 295 (394)
T ss_pred HHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHHHhc--
Confidence 33334445567788888999999999988888888888999999999997 743332 2222222222221110000
Q ss_pred CCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhh
Q 007736 126 RPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAV 205 (591)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p 205 (591)
..+.+.+..+.++.++|.+...+...+...|.+| ++ +++..++.+...++|+.+++
T Consensus 296 -----------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~~~~lg~~~~~ 351 (394)
T PRK11652 296 -----------------VMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YL------AGTAGALLGGLQNIGSGLAA 351 (394)
T ss_pred -----------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cc------chHHHHHHHHHHHHHHHHHH
Confidence 0244556667788888989888999998889887 45 78889999888999999999
Q ss_pred hhhhhhccccccc
Q 007736 206 TVLVYIQDNLGRE 218 (591)
Q Consensus 206 ~i~~~l~~~~g~~ 218 (591)
.+++.+.+...+.
T Consensus 352 ~~~~~~~~~~~~~ 364 (394)
T PRK11652 352 LLSAMLPQTGQFS 364 (394)
T ss_pred HHHHHccCCchHH
Confidence 9999887654443
No 221
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.47 E-value=2.5e-06 Score=75.46 Aligned_cols=131 Identities=21% Similarity=0.309 Sum_probs=93.0
Q ss_pred chhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhH
Q 007736 388 FVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFW 467 (591)
Q Consensus 388 ~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 467 (591)
..++.++..++.+++.+|..|| +.+..+..+..++.+.+... .+.+.
T Consensus 7 ~~~~~~~~~~~~g~~~d~~g~~-----------~~~~~~~~~~~~~~~~~~~~----------------------~~~~~ 53 (141)
T TIGR00880 7 YALGQLIYSPLSGLLTDRFGRK-----------PVLLVGLFIFVLSTAMFALS----------------------SNITV 53 (141)
T ss_pred ehhHHHHHHhhHHHHHhhcchh-----------HHHHHHHHHHHHHHHHHHHh----------------------ccHHH
Confidence 3445566677777777554443 44666777776666655542 23445
Q ss_pred HHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHH
Q 007736 468 LVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDF 547 (591)
Q Consensus 468 li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~ 547 (591)
+....++.+++.....+..+.++.|..|++.|++.+|+.+....++..+++.+.+.+.+.. + ....
T Consensus 54 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~----------~~~~ 119 (141)
T TIGR00880 54 LIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL----G----------WRAP 119 (141)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc----c----------hHHH
Confidence 5566788888888888888899999999999999999999999999999999999886432 1 2245
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 007736 548 YWLLAILSALNFVIYLAF 565 (591)
Q Consensus 548 f~~~~~~~~v~~~~~~~~ 565 (591)
|++.++.+++..+..+++
T Consensus 120 ~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 120 FLFLAILALAAFILLAFL 137 (141)
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 666666666665555444
No 222
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.30 E-value=1.3e-05 Score=82.74 Aligned_cols=156 Identities=14% Similarity=0.109 Sum_probs=115.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAG 112 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 112 (591)
..+...+..|+.-..=-..-++++.|+.+..|++..+.+...+.+..+..++..++-++-.|+ ...|.+.....+..+-
T Consensus 237 ~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~ill 315 (422)
T COG0738 237 HLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAILL 315 (422)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHH
Confidence 344444555554444445677899999988999999999999999999999999999998897 8888877766555444
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhh
Q 007736 113 VTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNW 192 (591)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 192 (591)
.+..++. ++ ..-+.+.++.|+..+..+|.+.+...+..|++. +.-|.
T Consensus 316 ~~~~~l~------------------------~g-~v~~~~l~~ig~F~simfPTIfslal~~l~~~t--------s~~s~ 362 (422)
T COG0738 316 LLAVALI------------------------GG-VVALYALFLIGLFNSIMFPTIFSLALKNLGEHT--------SVGSG 362 (422)
T ss_pred HHHHHHh------------------------cC-hHHHHHHHHHHHHhHHHHHHHHHHHHhccCccc--------cccce
Confidence 4444443 23 223445667899999999999999999999443 22222
Q ss_pred hHHHHhhchhhhhhhhhhhccccccchhHH
Q 007736 193 FFFFISIGSLAAVTVLVYIQDNLGREWGYG 222 (591)
Q Consensus 193 ~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~ 222 (591)
.-.+..+|+++.|.+-|++.|..|-...+.
T Consensus 363 ~l~maivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 363 LLVMAIVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred eeeeheecchHHHHHHHHHHHhhhhHHHHH
Confidence 233456899999999999999998777665
No 223
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.29 E-value=3.6e-05 Score=76.12 Aligned_cols=138 Identities=13% Similarity=0.138 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 007736 47 TTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLR 126 (591)
Q Consensus 47 ~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~ 126 (591)
+.|.+ +.....+++.+|+|.+|...+...-.++..+ .++.|.+.|++ |.+.++.+|.+...+|..++.....-.
T Consensus 17 t~Y~F-s~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~l~~~~~--- 90 (250)
T PF06813_consen 17 TTYTF-SAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLWLAVSGR--- 90 (250)
T ss_pred cccch-hhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCc---
Confidence 44443 3456678899999999999999888888887 48889999998 999999999999999998887764311
Q ss_pred CCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhh
Q 007736 127 PPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVT 206 (591)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~ 206 (591)
+ ...+.+.+.+..++.+.+.+...........+.||+ + ||++.++.-....+++.+-..
T Consensus 91 ----------i----~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~------RG~vvgilk~~~GLSaai~t~ 149 (250)
T PF06813_consen 91 ----------I----PSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-S------RGTVVGILKGFFGLSAAIFTQ 149 (250)
T ss_pred ----------c----CccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-c------cCceehhhhHHHHhHHHHHHH
Confidence 0 013556666666666666666555555556688984 5 899999966666666665544
Q ss_pred hhhhh
Q 007736 207 VLVYI 211 (591)
Q Consensus 207 i~~~l 211 (591)
+...+
T Consensus 150 i~~~~ 154 (250)
T PF06813_consen 150 IYSAF 154 (250)
T ss_pred HHHHH
Confidence 44333
No 224
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.28 E-value=3e-07 Score=96.12 Aligned_cols=152 Identities=18% Similarity=0.208 Sum_probs=119.9
Q ss_pred cccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCC
Q 007736 381 GASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAE 460 (591)
Q Consensus 381 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 460 (591)
.++++....+..+++.|+.+++.+|.-|+ +.+.+|..+..++.+..++..
T Consensus 70 ~Gll~~vf~v~~~i~sPl~gyLadryNR~-----------~v~~vG~~iW~~Av~~~~fs~------------------- 119 (493)
T KOG1330|consen 70 LGLLQTVFIVVFMIASPLFGYLADRYNRK-----------RVIAVGIFIWTLAVFASGFSN------------------- 119 (493)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhcCcc-----------eEEeeHHHHHHHHHHHHHHHH-------------------
Confidence 35666677778888999999988655444 447889999988888887642
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccC
Q 007736 461 IPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLN 540 (591)
Q Consensus 461 ~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~ 540 (591)
.+|-+.+.=.+.|+|++.+.|...+++.|.+|++.|++..++++++..+|+.+|-..+..+.+..+ .|.
T Consensus 120 ---~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~---~Wr----- 188 (493)
T KOG1330|consen 120 ---HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF---WWR----- 188 (493)
T ss_pred ---HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc---ceE-----
Confidence 456666777899999999999999999999999999999999999999999998888877765542 243
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHhhhcccccccccc
Q 007736 541 QGRLYDFYWLLAILSALNFVIYLAFARWYVYKDKRLAE 578 (591)
Q Consensus 541 ~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 578 (591)
+.|++.++++++..+...++.++-.++.+++.+
T Consensus 189 -----~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~ 221 (493)
T KOG1330|consen 189 -----WAFRGSAVLGVIVGLLVFLFVREPERGARDEVD 221 (493)
T ss_pred -----EEEEeehHHHHHHHHHHHhhccCcccccccccc
Confidence 568888899888888777777766655444433
No 225
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.28 E-value=7.1e-06 Score=87.60 Aligned_cols=162 Identities=16% Similarity=0.088 Sum_probs=126.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
|.....++..++...+.....+.+..|.+-.+|.+.............+..++.++...+++|+ |+|+++.++.++.++
T Consensus 236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i 314 (467)
T COG2211 236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAV 314 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHH
Confidence 3445555566677677777777777787777887777777777777888888899999999997 999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCCh-hhhhccchhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDP-QERNQMTNFF 190 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~ 190 (591)
+.++..+... .+...+++..++.++|.+...+..+++++|..+-+|- ..++.-|..+
T Consensus 315 ~~~~~~f~~~----------------------~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~ 372 (467)
T COG2211 315 GYLLLYFTPA----------------------GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVY 372 (467)
T ss_pred HHHHHHhhcC----------------------cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHH
Confidence 9999988621 4788888899999999999999999999999876552 1122245566
Q ss_pred hhhHHHHhhchhhhhhhhhhhccccc
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDNLG 216 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~~g 216 (591)
+.+.+..=+|.+++..+.|++....|
T Consensus 373 s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 373 SGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 66777777888888877777655444
No 226
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.25 E-value=1.3e-06 Score=89.59 Aligned_cols=175 Identities=13% Similarity=0.029 Sum_probs=127.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhch--hHHHHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLG--RYLTIAIFATVQA 110 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~G--rk~~~~~~~~~~~ 110 (591)
.++...+.....+.+.-..-+.+++++.+++..+..+.|...--..+.+.+++.+.|.++||+ + |......++++..
T Consensus 271 ~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~-~~~~wl~~~~gl~~~G 349 (464)
T KOG3764|consen 271 YILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKY-PHLRWLLSLGGLATVG 349 (464)
T ss_pred hHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhc-CchhHHHHHHHHHHHH
Confidence 455555555555666666677888999999986666999888888999999999999999998 9 6555555555544
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhh
Q 007736 111 AGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFF 190 (591)
Q Consensus 111 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 190 (591)
+......+. .+...+.+-++..+++.+............+.+.+..+.-...+...
T Consensus 350 ~~~~~iP~~------------------------~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVy 405 (464)
T KOG3764|consen 350 VSSGPIPFA------------------------TSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVY 405 (464)
T ss_pred HHhchhHhh------------------------hhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHH
Confidence 333333332 56777888888888888777666665555555544422111378899
Q ss_pred hhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHH
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGL 232 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~ 232 (591)
++...+..+|..+||.++|.+.+..|++|.-.+.++.-++-.
T Consensus 406 aIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iya 447 (464)
T KOG3764|consen 406 AIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYA 447 (464)
T ss_pred HHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988766665444433
No 227
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.23 E-value=9.1e-06 Score=88.16 Aligned_cols=209 Identities=8% Similarity=-0.109 Sum_probs=143.6
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcCCChH------H----HHHHHHHHHHHHHHHHhhhHHHhh
Q 007736 25 RSKTGGWTSAAMILGGEACERLTTLGIAVNLVTYLTG-TMHLGNA------S----AANTVTNFLGTSFMLCLLGGFIAD 93 (591)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~~~~------~----~~~~~~~~~~~~~i~~~~~G~laD 93 (591)
+..++.++.++.+++..++..++++.+..+...|+.+ .++-++. + ..+....+.+...+.+++.-++.+
T Consensus 251 ~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~ 330 (477)
T TIGR01301 251 GAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCR 330 (477)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455677899999999999999999999999998874 3443221 1 123344455555677777788898
Q ss_pred hhch-hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhcccccccccccccc
Q 007736 94 TFLG-RYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGS 172 (591)
Q Consensus 94 ~~~G-rk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~ 172 (591)
++ | ||++..++.++.+++.....+....+.-.. .....|--...+.......++...+.|+..+......+++++
T Consensus 331 ~~-g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s 406 (477)
T TIGR01301 331 GW-GAGKRLWGIVNIILAICLAATVLVTYVAKNSR---YYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALAS 406 (477)
T ss_pred Hh-ccchhHHHHHHHHHHHHHHHHHHHHhhhhccc---cccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHH
Confidence 87 8 577778898888888877765532110000 000000000111112466677778899999999999999999
Q ss_pred CCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccccc--cchhHHHHHHHHHHHHHHHHhcCCc
Q 007736 173 DQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDNLG--REWGYGICACAIVFGLVVFLSGTRR 241 (591)
Q Consensus 173 ~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g--~~~~f~~~~~~~~~~~~~~~~~~~~ 241 (591)
+..+++..+ .|..+|+.|.++.+...+..+..|.+.+.+| -.+++.+.++..+++.+..+...|+
T Consensus 407 ~~~~~~~~~----~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 407 IRSSNLGAG----QGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred HHccccCCC----CcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 999965411 6999999999999999999988887665554 5566777777777777766665554
No 228
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.22 E-value=2.8e-05 Score=83.56 Aligned_cols=167 Identities=13% Similarity=0.066 Sum_probs=111.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
+.++...+..++....++....++|.++++.+|.+..+.++.......+..++..+.+.+.++. +++|.+.....+..+
T Consensus 218 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~i 296 (413)
T PRK15403 218 RLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLV 296 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHH
Confidence 4567777777777778888888889999999999999999988777788888888888776554 444544444444444
Q ss_pred HHHHHHHHhh-cCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhh
Q 007736 112 GVTILTISTI-IPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFF 190 (591)
Q Consensus 112 ~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 190 (591)
+.+++..... .+ .+....+++.++.++|.+...|...+..- .+.+.+ ++++.
T Consensus 297 g~~l~~~~~~~~~--------------------~~~~~~~~~~~l~~~G~~~~~p~~~~~al--~~~~~~-----~G~a~ 349 (413)
T PRK15403 297 GLALLIVGNLLWP--------------------HVWLWSVLGTSLYAFGIGLIFPTLFRFTL--FSNNLP-----KGTVS 349 (413)
T ss_pred HHHHHHHHHHHcc--------------------ccHHHHHHHHHHHHHHHHHHhHHHHHHHh--ccCCCC-----CcHHH
Confidence 5444433210 01 23333466777788888887777764332 222211 68888
Q ss_pred hhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHH
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACA 227 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~ 227 (591)
++++.....+..+++...+++.++ +-...|....++
T Consensus 350 a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~ 385 (413)
T PRK15403 350 ASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVV 385 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHH
Confidence 888888888888888888888665 445555544443
No 229
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.22 E-value=6.8e-06 Score=89.95 Aligned_cols=183 Identities=9% Similarity=-0.039 Sum_probs=125.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHH----HHHHHHHHHHHHHHHHhhhH----HHhhhhchhHHH--HH
Q 007736 34 AAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNAS----AANTVTNFLGTSFMLCLLGG----FIADTFLGRYLT--IA 103 (591)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~G----~laD~~~Grk~~--~~ 103 (591)
+..+++...+....+.-..+.++.|..+..+.+... .+++.+...+...+..++.. ++.||..+.+.. +.
T Consensus 274 ~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~ 353 (475)
T TIGR00924 274 YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFT 353 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHH
Confidence 444444455555565566666788877665543222 55666666666666666644 445441122333 36
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhh
Q 007736 104 IFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQER 183 (591)
Q Consensus 104 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 183 (591)
+|.++.+++...+++..... + .....+.+.+.+..++.++|.....|...+++++..|++.
T Consensus 354 ~G~~l~~~~~~~~~~~~~~~---------~------~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~---- 414 (475)
T TIGR00924 354 LGMLFCGASFLTFAASIWFA---------D------AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL---- 414 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhc---------C------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH----
Confidence 77888888877776542110 0 0112588888999999999999999999999999999999
Q ss_pred hccchhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHh
Q 007736 184 NQMTNFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLS 237 (591)
Q Consensus 184 ~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 237 (591)
|+++++++.....+|..+++.+.....+..+|...|....+..++..+++++
T Consensus 415 --~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (475)
T TIGR00924 415 --MGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMAL 466 (475)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988887777677877776666555554444444
No 230
>PRK11462 putative transporter; Provisional
Probab=98.22 E-value=2.7e-05 Score=84.88 Aligned_cols=160 Identities=9% Similarity=0.000 Sum_probs=95.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAG 112 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 112 (591)
..+.++...++..............|.+..+|. ....+.+...+.++..++.+++++++||+ |+|+++..+..+..+.
T Consensus 229 ~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~ 306 (460)
T PRK11462 229 QWRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVI 306 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHH
Confidence 344444444444444444444444444333443 33445566777888899999999999997 9998877655544443
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhcc--chhh
Q 007736 113 VTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQM--TNFF 190 (591)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r--~~~~ 190 (591)
.++..+. |. .+...+++..++.|++.+...+..+++++|..+.++-+ ...| +..+
T Consensus 307 ~~~~~~~---~~-------------------~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~-tG~r~~g~~~ 363 (460)
T PRK11462 307 SLAMFFV---PM-------------------QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWC-NGKRLTGISF 363 (460)
T ss_pred HHHHHHh---ch-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHh-cCCCchHHHH
Confidence 3333222 10 22323344445567777776666778888887744311 1113 4445
Q ss_pred hhhHHHHhhchhhhhhhhhhhcccccc
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDNLGR 217 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~~g~ 217 (591)
+...+...+|..+++.++|.+.+..|+
T Consensus 364 a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 364 AGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 667788889999999888887665554
No 231
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.19 E-value=2e-05 Score=78.58 Aligned_cols=150 Identities=19% Similarity=0.199 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHhhhhcCCCh--HHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 007736 47 TTLGIAVNLVTYLTGTMHLGN--ASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPS 124 (591)
Q Consensus 47 ~~~~~~~~l~~yl~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~ 124 (591)
........++.+.. ..+.+. ...+++.+.+.+...++.++.|+++||+ |||+.+..+.....++.+++.+...
T Consensus 17 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~--- 91 (338)
T COG0477 17 DLGLLSPALPLLLS-TLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN--- 91 (338)
T ss_pred hcchHHHHHHHHHH-HcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc---
Confidence 33333344455544 344444 4788899999999999999999999998 9998888888765666555555410
Q ss_pred CCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCC-CChhhhhccchhhhhhHH-HHhhchh
Q 007736 125 LRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDD-SDPQERNQMTNFFNWFFF-FISIGSL 202 (591)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~-~~~ig~~ 202 (591)
.+...+.+.|.+.|++.+...+...+++.|.+|+ +. |+...+.... ...+|..
T Consensus 92 -------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 146 (338)
T COG0477 92 -------------------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATE------RGLAVGLVTLGAGALGLA 146 (338)
T ss_pred -------------------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhH------HHHHHHHHHHHHHHHHHH
Confidence 2577888899999999999999999999999998 44 8888888777 5778888
Q ss_pred hhhhhhhhhccc--cccchhHHHHHH
Q 007736 203 AAVTVLVYIQDN--LGREWGYGICAC 226 (591)
Q Consensus 203 ~~p~i~~~l~~~--~g~~~~f~~~~~ 226 (591)
++|.+++.+... .+|+..|.+...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (338)
T COG0477 147 LGPLLAGLLLGALLWGWRAAFLLAAL 172 (338)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 888777766544 568875555544
No 232
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.18 E-value=2.8e-05 Score=81.04 Aligned_cols=174 Identities=15% Similarity=0.104 Sum_probs=138.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHH
Q 007736 35 AMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVT 114 (591)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~ 114 (591)
...+...++...++..-=..+-+|--+.+|++..+...+.+....+..++....|++..|-.+++++..+++.+.+++..
T Consensus 211 ~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~ 290 (403)
T PF03209_consen 211 RRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFA 290 (403)
T ss_pred hHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHH
Confidence 33444444555566665667788888999999999999999999999999999999998655999999999999888888
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhH
Q 007736 115 ILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFF 194 (591)
Q Consensus 115 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 194 (591)
+..++... .+.+.+..+.++.|+|.|.+.....+.+.|+..+++ -+..+|...
T Consensus 291 lii~a~~~---------------------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~------aG~~mG~WG 343 (403)
T PF03209_consen 291 LIILAGPL---------------------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR------AGLFMGAWG 343 (403)
T ss_pred HHHHHHhc---------------------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc------hhHHHHHHH
Confidence 77776432 467888999999999999999999999999999888 889999999
Q ss_pred HHHhhchhhhhhhhhhhccc----------cccchhHHHHHHHHHHHHHHH
Q 007736 195 FFISIGSLAAVTVLVYIQDN----------LGREWGYGICACAIVFGLVVF 235 (591)
Q Consensus 195 ~~~~ig~~~~p~i~~~l~~~----------~g~~~~f~~~~~~~~~~~~~~ 235 (591)
....++..+|-.++|.+.|. .+|...|.+-++..+++++++
T Consensus 344 aaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 344 AAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888876542 245566666666555555443
No 233
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.14 E-value=1.2e-05 Score=87.59 Aligned_cols=164 Identities=13% Similarity=0.028 Sum_probs=107.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhh---chhHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTF---LGRYLTIAIFATV 108 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~---~Grk~~~~~~~~~ 108 (591)
..+|...+..+|.....|++..|+|.|+++..|++..+++.+...+.+++.++.+++|+++||. ..+|........+
T Consensus 273 p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~ 352 (495)
T KOG2533|consen 273 PGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCL 352 (495)
T ss_pred hhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 4789999999999999999999999999986779999999999999999999999999999993 1666666665554
Q ss_pred HHHHH-HHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccc
Q 007736 109 QAAGV-TILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMT 187 (591)
Q Consensus 109 ~~i~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 187 (591)
+.+.. +.+.... .......+.+....+.....+....-..+....+.. +-
T Consensus 353 ~~~~g~~~l~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k-----~~ 403 (495)
T KOG2533|consen 353 YAIIGAISLLAAA------------------------VLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTK-----AL 403 (495)
T ss_pred HHHHHHHHHHhhc------------------------cchHHhHHHHhcchhhHHHHHHHHhhccccccchHH-----hH
Confidence 44433 3333321 122222222223333344445555556666544441 44
Q ss_pred hhhhhhHHHHhhchhhh-hhhhhhhccccccchhHHHH
Q 007736 188 NFFNWFFFFISIGSLAA-VTVLVYIQDNLGREWGYGIC 224 (591)
Q Consensus 188 ~~~~~~~~~~~ig~~~~-p~i~~~l~~~~g~~~~f~~~ 224 (591)
+..+.+..+.+.++.++ ++..+.....++|...|...
T Consensus 404 ~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~ 441 (495)
T KOG2533|consen 404 TTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYML 441 (495)
T ss_pred HHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHH
Confidence 44444444444444444 44445555667888888443
No 234
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.13 E-value=4.1e-08 Score=106.46 Aligned_cols=187 Identities=15% Similarity=0.080 Sum_probs=114.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAG 112 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 112 (591)
.+...+....+.+...+....+...++.+..+.++. -.......+...++.+++.++.||+ |||++++.+.++.+++
T Consensus 253 ~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~~ 329 (451)
T PF00083_consen 253 RLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAIC 329 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-cccccccccccccccc
Confidence 444444555555555544555555566666777666 2222334456667788888999997 9999999998888877
Q ss_pred HHHHH-HHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhh
Q 007736 113 VTILT-ISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFN 191 (591)
Q Consensus 113 ~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 191 (591)
.+.++ .....+. .. ...+...+....+.......+..+....+.+|.+|.+. |+++.+
T Consensus 330 ~~~~~~~~~~~~~----------~~-----~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~------R~~~~~ 388 (451)
T PF00083_consen 330 SLILGIIFFLGVS----------SS-----SWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKV------RSTGIG 388 (451)
T ss_pred ccccccccccccc----------cc-----cccccccceeeeeccccccccccccccccccccccccc------cccccc
Confidence 77665 1110010 00 00011121111111122222344666788999999999 999999
Q ss_pred hhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcCCcee
Q 007736 192 WFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGTRRYR 243 (591)
Q Consensus 192 ~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 243 (591)
+.+....+++.+++.+...+.+..+-...+.+.+.+.++..+..+...+|.+
T Consensus 389 ~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~ 440 (451)
T PF00083_consen 389 LSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETK 440 (451)
T ss_pred cccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCC
Confidence 9888889999999998888887776334455555544555555555555544
No 235
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.02 E-value=5.3e-05 Score=79.42 Aligned_cols=166 Identities=13% Similarity=0.105 Sum_probs=119.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhh---chhHHHHHH-HHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTF---LGRYLTIAI-FAT 107 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~---~Grk~~~~~-~~~ 107 (591)
+.+..+....+...+++-.=.+++++|++ .+|++.+..+.+-....+.+.+.+++.|..+||. +||||-++. +..
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 66677777777778888777889999986 6899999888888788899999999999999984 588876654 445
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCC-CCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhcc
Q 007736 108 VQAAGVTILTISTIIPSLRPPKCN-LNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQM 186 (591)
Q Consensus 108 ~~~i~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 186 (591)
..+++.++...+..+. +..|. ..++ ........++++.-++=+..-....+.-++++|+...++. +
T Consensus 111 ~i~~~l~Lig~aaDig---~~lgd~~~~~-----~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~-----~ 177 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIG---LLLGDNERKP-----VKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAK-----K 177 (498)
T ss_pred HHHHHHhhhhhHhhhh---HHhcCCcccc-----cchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhh-----h
Confidence 6666777777664332 11110 0000 1113444556666666677777788889999999876662 2
Q ss_pred chhhhhhHHHHhhchhhhhhhhhhh
Q 007736 187 TNFFNWFFFFISIGSLAAVTVLVYI 211 (591)
Q Consensus 187 ~~~~~~~~~~~~ig~~~~p~i~~~l 211 (591)
.++.+++.+.+.+|+.+|...+++.
T Consensus 178 ~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 178 TRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred hccchhHHHHHHhcceeeeeccccc
Confidence 2299999999999999998877744
No 236
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.01 E-value=0.0017 Score=68.41 Aligned_cols=62 Identities=21% Similarity=0.279 Sum_probs=52.2
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007736 464 SVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVH 525 (591)
Q Consensus 464 ~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~ 525 (591)
+.|.+++.++..|+-.+..+...+..+.+..|++.|..++|.......+|..+++.++-++.
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 56666677788888888888888888999999999999999999998888888888765553
No 237
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.99 E-value=0.0017 Score=66.67 Aligned_cols=159 Identities=18% Similarity=0.147 Sum_probs=95.2
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhh-----hhchhHHH
Q 007736 27 KTGGWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIAD-----TFLGRYLT 101 (591)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD-----~~~Grk~~ 101 (591)
.++..++++.+++.+..+..- ++...-+|..++ ..|.|-++.+.....+ -=+-.-+++..+.| |+ ||||.
T Consensus 26 ~~~d~~~illLl~LYllQGiP-~GL~~~iP~lL~-ak~vSyt~~a~fS~ay--~P~sLKllWaPiVDs~y~k~~-Grrks 100 (510)
T KOG3574|consen 26 LKGDRSSILLLLFLYLLQGIP-LGLIGAIPLLLQ-AKGVSYTSQAIFSFAY--WPFSLKLLWAPIVDSVYSKRF-GRRKS 100 (510)
T ss_pred hhhhhhhHHHHHHHHHHcCCc-hhHhhhhHHHhc-CCCcchhhhhhhhhhh--hHHHHHHHHHhhhHHHHHHhh-ccccc
Confidence 445667888888888887665 455556666665 5678877766443222 23355677888888 86 99997
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChh
Q 007736 102 IAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQ 181 (591)
Q Consensus 102 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 181 (591)
-++-+ -+.+|.++..++...+ .+.+.+. ..++...+....+++-+..+.--.++....-.+..+++
T Consensus 101 Wvvp~-q~llG~~mllLs~~v~----------~~~g~ng-~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~-- 166 (510)
T KOG3574|consen 101 WVVPC-QYLLGLFMLLLSYLVD----------RGLGGNG-GLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSREN-- 166 (510)
T ss_pred eeeeh-HHHHHHHHHHHhhCCC----------cccccCC-CCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhh--
Confidence 66532 3345555555554332 1111111 11333333334455555555555555666666677777
Q ss_pred hhhccchhhhhhHHHHhhchhhhhhhh
Q 007736 182 ERNQMTNFFNWFFFFISIGSLAAVTVL 208 (591)
Q Consensus 182 ~~~~r~~~~~~~~~~~~ig~~~~p~i~ 208 (591)
-+-+......+.+.|.+++..+.
T Consensus 167 ----lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 167 ----LGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred ----cCchhHHHHHHHhhhHHhhccee
Confidence 67776667777778877775544
No 238
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.97 E-value=1.8e-05 Score=84.23 Aligned_cols=171 Identities=8% Similarity=-0.021 Sum_probs=137.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q 007736 37 ILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTIL 116 (591)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~ 116 (591)
+++..++...+.-.+.++|--+++ +.+-.....|...+.-..+-.+.-++.++|..|+ |+-+++.+++++..+=.+..
T Consensus 376 ff~~av~mG~g~~lv~tFLfWHle-d~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~ 453 (618)
T KOG3762|consen 376 FFFVAVVMGAGVGLVFTFLFWHLE-DLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYY 453 (618)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHh-hcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHH
Confidence 344455555555566666666654 5666666666555556667777888889999997 99999999999999888888
Q ss_pred HHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhh-hHH
Q 007736 117 TISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNW-FFF 195 (591)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~ 195 (591)
... .|.|+.+..-+++|+..+..+..+.+|+++..|++- |.++.++ ...
T Consensus 454 S~L------------------------~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l------~at~Q~l~~g~ 503 (618)
T KOG3762|consen 454 SYL------------------------QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGL------RATAQGLLQGI 503 (618)
T ss_pred HHh------------------------cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc------hHHHHHHHHHH
Confidence 776 588898999999999999999999999999999999 8899888 556
Q ss_pred HHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHHHHhcC
Q 007736 196 FISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVVFLSGT 239 (591)
Q Consensus 196 ~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 239 (591)
.-.+|-.+|.+|+|.+..++|-+..|.+..+.+++.++.+....
T Consensus 504 f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 504 FHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred hcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhh
Confidence 67899999999999999999989889888777666655554443
No 239
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.97 E-value=5.8e-05 Score=60.42 Aligned_cols=70 Identities=19% Similarity=0.059 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHH
Q 007736 37 ILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATV 108 (591)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~ 108 (591)
+-...++...+.-.+.++++.|++ +.|++..++|.+.++..+...+++++.|+++||+ ||++.+.....+
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~ 74 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHH
Confidence 344556666677778899999998 4899999999999999999999999999999998 888877765543
No 240
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.91 E-value=6.9e-05 Score=82.60 Aligned_cols=149 Identities=11% Similarity=-0.034 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh--hcCCCh------HHHHHHHHHHHHHHHHHHhhh----HHHhhhhchhHHHHHHHH
Q 007736 39 GGEACERLTTLGIAVNLVTYLTG--TMHLGN------ASAANTVTNFLGTSFMLCLLG----GFIADTFLGRYLTIAIFA 106 (591)
Q Consensus 39 ~~~~~~~~~~~~~~~~l~~yl~~--~~~~~~------~~~~~~~~~~~~~~~i~~~~~----G~laD~~~Grk~~~~~~~ 106 (591)
+..++....+|.+..-++.++.. ..+.+. ...+++.+...+...+..++. +++.||+ +..+.+.+++
T Consensus 279 ~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~ 357 (500)
T PRK09584 279 FILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGM 357 (500)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHH
Confidence 33445556677777777776543 111111 124444555554455555555 6667775 7778899999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhcc
Q 007736 107 TVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQM 186 (591)
Q Consensus 107 ~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 186 (591)
++.+++.+.++.....+. .|+ ..+.+.+....+++++|.....|...+++.+..|++. |
T Consensus 358 ~l~~l~f~~l~~~~~~~~--------~~~-------~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~------r 416 (500)
T PRK09584 358 VLCSGAFLVLPLGAKFAN--------DAG-------IVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRL------M 416 (500)
T ss_pred HHHHHHHHHHHHHHHhcC--------CCC-------ccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHH------H
Confidence 999999988877643210 011 1245678888999999999999999999999999999 9
Q ss_pred chhhhhhHHHHhhchhhhhhhhh
Q 007736 187 TNFFNWFFFFISIGSLAAVTVLV 209 (591)
Q Consensus 187 ~~~~~~~~~~~~ig~~~~p~i~~ 209 (591)
++++|.+.+...+|+.++..+.+
T Consensus 417 g~~~g~~~l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 417 GFIMGSWFLTTAGAALIAGYVAN 439 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988777777777766554
No 241
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.90 E-value=0.00022 Score=80.86 Aligned_cols=176 Identities=14% Similarity=0.123 Sum_probs=121.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHH-HHHHHHhhhHHHhhhhch--hHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLG-TSFMLCLLGGFIADTFLG--RYLTIAIFATV 108 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~G~laD~~~G--rk~~~~~~~~~ 108 (591)
+.++...+..++....++++..++|.|+++++|++..+++++.+...+ +..++.+++|+++||+ + .|+++.+++++
T Consensus 330 ~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~-~~~~~~~~~~~~~~ 408 (633)
T TIGR00805 330 PIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKF-KLNVKKAAYFAICL 408 (633)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeee-cccHHHHHHHHHHH
Confidence 467777888889999999999999999999999999999999887765 6789999999999997 6 56677777766
Q ss_pred HHHHHHHHHHHhhc----------------------------------CCCCCCCCCCC---------------------
Q 007736 109 QAAGVTILTISTII----------------------------------PSLRPPKCNLN--------------------- 133 (591)
Q Consensus 109 ~~i~~~l~~~~~~~----------------------------------~~~~~~~~~~~--------------------- 133 (591)
..++.++......+ +....|+|+.|
T Consensus 409 ~~~~~~~~~~~~~~~C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~ 488 (633)
T TIGR00805 409 STLSYLLCSPLFLIGCESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSN 488 (633)
T ss_pred HHHHHHHHHHHHeecCCCCccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCc
Confidence 66665442210000 11122233221
Q ss_pred ---CCCcccc--------------cchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHH
Q 007736 134 ---HGQSCIQ--------------ASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFF 196 (591)
Q Consensus 134 ---~~~~~~~--------------~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 196 (591)
+.=||.+ .=...+..+++..++..+..+....+....+-+.+|+++ |.-++|+..+.
T Consensus 489 ~~y~~CsCi~~~~~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~~~------rs~alg~~~~~ 562 (633)
T TIGR00805 489 MVYTNCSCVQTPGNSSAKKGLCNPPCATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPEE------KSLAIGLQWLC 562 (633)
T ss_pred ceecccccccCCCCCCCcCCCCCcccchhHHHHHHHHHHHHHHHHhccCchheEEeeccCccc------chHHhhHHHHH
Confidence 1123331 111123444555555555555555666778888999999 99999995555
Q ss_pred -Hhhchhhhhhhhhhhccc
Q 007736 197 -ISIGSLAAVTVLVYIQDN 214 (591)
Q Consensus 197 -~~ig~~~~p~i~~~l~~~ 214 (591)
--+|.+-+|++.|++.|.
T Consensus 563 ~rllg~iP~pi~fG~~iD~ 581 (633)
T TIGR00805 563 MRVFATIPAPILFGLLIDV 581 (633)
T ss_pred HHHhcCCChhHHHhhhhhc
Confidence 457888899999988875
No 242
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.88 E-value=1.6e-05 Score=86.95 Aligned_cols=146 Identities=11% Similarity=-0.076 Sum_probs=112.2
Q ss_pred hhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCccc
Q 007736 60 TGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCI 139 (591)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 139 (591)
++.+|+++.+.|.+.....++..++..+.+++.+|+ +.|+++.++.++.+++.+.......-- |...|.
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~-------~~~~gi--- 348 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRW-------NLAFGI--- 348 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeecc-------ccccCC---
Confidence 457899999999999999999999999999999997 999999999988888775543211000 000000
Q ss_pred ccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccccc---
Q 007736 140 QASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDNLG--- 216 (591)
Q Consensus 140 ~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g--- 216 (591)
.+...+...-++.+++.+....+...++.+..|++. +++.++++....++|..+++.+++++.++.|
T Consensus 349 ----~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~------egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~ 418 (468)
T TIGR00788 349 ----SDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC------ESSVFALLASILHLGSSVSGFLGVLLMETIGITC 418 (468)
T ss_pred ----CCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc------eehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 122344455667788888888888999999999999 9999999999999999999999999988777
Q ss_pred --cchhHHHHHH
Q 007736 217 --REWGYGICAC 226 (591)
Q Consensus 217 --~~~~f~~~~~ 226 (591)
++..+....+
T Consensus 419 ~~~~~~~~~i~i 430 (468)
T TIGR00788 419 DNSNNLWLLILG 430 (468)
T ss_pred ccccchHHHHHH
Confidence 6555544433
No 243
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.84 E-value=9.7e-05 Score=80.57 Aligned_cols=130 Identities=12% Similarity=0.120 Sum_probs=85.0
Q ss_pred hhhhhhhhhhhhhhhhhh-hhhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhH
Q 007736 389 VGSILLTVPVYDRIIVPI-ARKVFKTPQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFW 467 (591)
Q Consensus 389 ~~~~~~~~~l~~~~~~~~-~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 467 (591)
.....+..++.+++.||+ +|| +.+.+|.++.+++.+++.... .+...
T Consensus 55 ~~~~~l~~ligG~LaDRilGrr-----------r~iliG~il~~lg~lll~~~~---------------------~~~~~ 102 (493)
T PRK15462 55 CSLVYVTPILGGFLADKVLGNR-----------MAVMLGALLMAIGHVVLGASE---------------------IHPSF 102 (493)
T ss_pred HHHHHHHHHHHHHHHHHccCcH-----------HHHHHHHHHHHHHHHHHHHhh---------------------cchhH
Confidence 334445556677777665 444 557888888888876554311 11122
Q ss_pred HHHHHHHHHHHHHHHhhhhheeecccCCcc--hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchH
Q 007736 468 LVPQFFLVGAGEAFTYIGQLDFFLRECPKG--MKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLY 545 (591)
Q Consensus 468 li~~~~l~g~g~~~~~~~~~~~~~~~~p~~--~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~ 545 (591)
+.+...+..+|.++..+...+++.|.+|++ .|+++.+++....++|+.+++.+.+++.+.. +| .
T Consensus 103 ~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~----Gw----------~ 168 (493)
T PRK15462 103 LYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY----SW----------A 168 (493)
T ss_pred HHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh----Ch----------H
Confidence 233444555666666677778899999875 7999999999999999999999999986532 23 3
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 007736 546 DFYWLLAILSALNFVIYLA 564 (591)
Q Consensus 546 ~~f~~~~~~~~v~~~~~~~ 564 (591)
..|.+.++.++++.+.+++
T Consensus 169 ~~F~iaaigm~l~li~~~~ 187 (493)
T PRK15462 169 MGFGLAAVGMIAGLVIFLC 187 (493)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4566655555554444433
No 244
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.82 E-value=0.00015 Score=80.20 Aligned_cols=195 Identities=12% Similarity=0.068 Sum_probs=109.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHH
Q 007736 30 GWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQ 109 (591)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~ 109 (591)
.++.....+....+++.+.+....+....+-+..|.+... .....+..+...++..+++++.||+ |||+.++.+...+
T Consensus 292 ~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~~m 369 (513)
T KOG0254|consen 292 VRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAAGM 369 (513)
T ss_pred hHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHHHH
Confidence 4455555555555655555544444444445566665443 4444555677778888889999998 9999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchh
Q 007736 110 AAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNF 189 (591)
Q Consensus 110 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 189 (591)
.++.++++........ |.. ................+.. ...+..+..+.+.+|.+|.+. |+++
T Consensus 370 ~~~~~~~~~~~~~~~~--------~~~--~~~~~~~~~~~~~~~~v~~-f~~g~g~v~w~~~sEifp~~~------r~~~ 432 (513)
T KOG0254|consen 370 SICLVILAVVGVFALY--------YPN--SSKGAGWLAIVFLCLFIFS-FAIGWGPVPWVIVSEIFPLRL------RSKG 432 (513)
T ss_pred HHHHHHHHHHHHHhcc--------CCC--cccchhHHHHHHHHHHHHH-HhcccccchhhhhhccCcHhH------Hhhh
Confidence 9999988876432210 000 0000012222222222233 333334666788999999999 8888
Q ss_pred hhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHH-HHHhcCCcee
Q 007736 190 FNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLV-VFLSGTRRYR 243 (591)
Q Consensus 190 ~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~~~ 243 (591)
.++......+...+.......+.+..++...|.+......+... ..++..+|.+
T Consensus 433 ~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETk 487 (513)
T KOG0254|consen 433 ASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETK 487 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCC
Confidence 88855554444444333333333333333444444433333333 4444455433
No 245
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.81 E-value=0.0013 Score=69.33 Aligned_cols=153 Identities=12% Similarity=0.087 Sum_probs=108.2
Q ss_pred HHHHHHHhhhh-cCCChHHHHH-HHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 007736 52 AVNLVTYLTGT-MHLGNASAAN-TVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPK 129 (591)
Q Consensus 52 ~~~l~~yl~~~-~~~~~~~~~~-~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~ 129 (591)
-+++..|+.+. .|++..|... +.-+..-.+...-++...++|.. |-|++++++.+...+...++-+.
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-~Ykpviil~~~~~i~t~~lll~~---------- 91 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-RYKPVIILQALSYIITWLLLLFG---------- 91 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHH----------
Confidence 35678899887 8999988763 34444556677888889999997 99999999888877777776665
Q ss_pred CCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhh
Q 007736 130 CNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLV 209 (591)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~ 209 (591)
.+...+-+.-+.-|++.+.. .+..+++--..|+++ --++.+....+.-+|-.++..++-
T Consensus 92 --------------~sv~~mq~~q~~yg~~~a~e-vay~sYiys~v~~~~------yq~vts~~raa~l~g~~~s~~lgQ 150 (412)
T PF01770_consen 92 --------------TSVLAMQLMQFFYGLATAAE-VAYYSYIYSVVDKEH------YQKVTSYTRAATLVGRFISSLLGQ 150 (412)
T ss_pred --------------CcHHHHHHHHHHHHHHHHHH-HHHHHHheeecCHHH------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777777777778877774 466778877788777 666677777677677777766555
Q ss_pred hhcc--ccccchhHHHHHHHHHHHHHHHH
Q 007736 210 YIQD--NLGREWGYGICACAIVFGLVVFL 236 (591)
Q Consensus 210 ~l~~--~~g~~~~f~~~~~~~~~~~~~~~ 236 (591)
.+.. ..++....++......+++++.+
T Consensus 151 llvs~~~~sy~~L~~isl~~~~~a~~~~~ 179 (412)
T PF01770_consen 151 LLVSFGGVSYFQLNYISLASVSLALLIAL 179 (412)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4443 23466666666655555555433
No 246
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.78 E-value=9.7e-05 Score=81.14 Aligned_cols=105 Identities=10% Similarity=0.130 Sum_probs=79.5
Q ss_pred hhhhhhhhhhhhhhh-hhhhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHH
Q 007736 391 SILLTVPVYDRIIVP-IARKVFKTPQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLV 469 (591)
Q Consensus 391 ~~~~~~~l~~~~~~~-~~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li 469 (591)
...+..++.+++.|| ++|| +.+.+|.++.+++.+.+.+.. .....++
T Consensus 62 ~~~~~~~~~G~laDr~~G~r-----------~~~~~g~~~~~~g~~~~~~~~---------------------~~~~ll~ 109 (489)
T PRK10207 62 LVYGLISIGGYVGDHLLGTK-----------RTIVLGAIVLAIGYFMTGMSL---------------------LKPDLIF 109 (489)
T ss_pred HHHHHHhhHHHhhhhccchH-----------HHHHHHHHHHHHHHHHHHHhc---------------------cchhHHH
Confidence 334445667777765 4544 668889999998887777531 1122234
Q ss_pred HHHHHHHHHHHHHhhhhheeecccCCcc--hhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 007736 470 PQFFLVGAGEAFTYIGQLDFFLRECPKG--MKTMSTGLFLSTLSLGFFVSSLLVSLVHKV 527 (591)
Q Consensus 470 ~~~~l~g~g~~~~~~~~~~~~~~~~p~~--~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~ 527 (591)
+..++.++|.++..|...+++.|.+|++ .|+.+.+++....++|..+|+.+++++.+.
T Consensus 110 ~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~ 169 (489)
T PRK10207 110 IALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADK 169 (489)
T ss_pred HHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5677889999999998899999999887 457789999999999999999999999754
No 247
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.71 E-value=0.025 Score=60.67 Aligned_cols=190 Identities=10% Similarity=-0.089 Sum_probs=103.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
|..+.+....++.+++-=+.-.-.+.|+.+-+.-+.--.+...-.-.+...+..+.-|...||. .|.+++..++++.-+
T Consensus 2 ~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~ 80 (432)
T PF06963_consen 2 RALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNL 80 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHH
Confidence 3456677777887777777777788888876543433333333344566778888889999997 999998888765444
Q ss_pred HHHHHHH----HhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccc
Q 007736 112 GVTILTI----STIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMT 187 (591)
Q Consensus 112 ~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 187 (591)
+....+. ....+... .+ ........+.+..++.++..=+......+.=-|+...=..+......
T Consensus 81 sv~~s~~~~~~l~~~~~~~--------~~----~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La 148 (432)
T PF06963_consen 81 SVAASCALFLLLLSYPSSS--------SQ----SSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALA 148 (432)
T ss_pred HHHHHHHHHHHHHhCCccc--------cc----cchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHH
Confidence 3322221 11111000 00 00112222222222222222222222233333443211100111266
Q ss_pred hhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHHHHHH
Q 007736 188 NFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVFGLVV 234 (591)
Q Consensus 188 ~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 234 (591)
+..+...=.--+.-.++|++.|.+....|......+.+..-+++.++
T Consensus 149 ~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 149 RMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHH
Confidence 66666555566788999999999998888776666555554454443
No 248
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.56 E-value=0.00086 Score=71.87 Aligned_cols=105 Identities=14% Similarity=0.059 Sum_probs=84.0
Q ss_pred cchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhh
Q 007736 387 FFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVF 466 (591)
Q Consensus 387 ~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 466 (591)
....+-.+...+.+++.+|++-| +.+.++++...+..+++.+.. +..
T Consensus 70 ~F~ysYal~qIp~GlLaDrlG~K-----------~vL~l~~l~Wsl~t~L~~fa~----------------------Sl~ 116 (511)
T TIGR00806 70 VLPYSHLAVLVPVFLLTDYLRYK-----------PVLVLQALSFVCVWLLLLLGT----------------------SVW 116 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHhCch-----------HHHHHHHHHHHHHHHHHHHHH----------------------HHH
Confidence 33444455556666666544444 567788888887777777642 566
Q ss_pred HHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007736 467 WLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVH 525 (591)
Q Consensus 467 ~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~ 525 (591)
.+.+.-++.|++++... ..+.++.+.+|++.|+++.|+.+....+|..+++.+++++.
T Consensus 117 ~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~ 174 (511)
T TIGR00806 117 HMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV 174 (511)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888899999999999 88999999999999999999999999999999999999944
No 249
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.54 E-value=0.00045 Score=72.54 Aligned_cols=182 Identities=12% Similarity=0.033 Sum_probs=113.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 32 TSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
+++.++++.....-..+|++...+-.-+ ..-|.++...|++.....+++.+++++.|.++||.-+-|.++.+......+
T Consensus 266 ~~F~il~~~ygi~~g~F~~l~~~l~~~l-~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v 344 (480)
T KOG2563|consen 266 RQFIILAICYGIGLGLFNSLSTLLNLAL-CPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALV 344 (480)
T ss_pred ccHHHHHHHHhhhHHHHHHHHHHhhhcc-ccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHH
Confidence 4566666666666666666555554333 345677788999999999999999999999999973445555555555555
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCC-CCCChhhhhccchhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQF-DDSDPQERNQMTNFF 190 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~ 190 (591)
+.......+..+ ...+.++....+.|++..+..|.-.-+..|.. |..| +...
T Consensus 345 ~~~~l~~~t~~~--------------------~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E-------~tSs 397 (480)
T KOG2563|consen 345 GTLMLLTCTLFL--------------------GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAE-------GTSS 397 (480)
T ss_pred HHHHHHHhhccC--------------------CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCC-------cccc
Confidence 532222211111 24455666667778888888888888888875 5554 5566
Q ss_pred hhhHHHHhhchhhhhhhhhhhccccc---cch-hHHHHHHHHHHHHHHHHhcCCc
Q 007736 191 NWFFFFISIGSLAAVTVLVYIQDNLG---REW-GYGICACAIVFGLVVFLSGTRR 241 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~~~l~~~~g---~~~-~f~~~~~~~~~~~~~~~~~~~~ 241 (591)
|+.+...++-+.+=..+-+...+..+ |.. .-+.......++..+..+.+++
T Consensus 398 Gll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 398 GLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred eeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhh
Confidence 67666666666666666676666655 333 3333333333444444444443
No 250
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.54 E-value=8.9e-05 Score=77.77 Aligned_cols=129 Identities=12% Similarity=0.078 Sum_probs=96.1
Q ss_pred HHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhcccc
Q 007736 83 MLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGG 162 (591)
Q Consensus 83 i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~ 162 (591)
.+..+..++.|++ |||+.-+-+.+++.+..+.++.. +||.- .+...+..--+.+-++.-+
T Consensus 363 PGyw~tv~~id~i-GRk~iq~~GF~~~~i~~~~~~~~------------y~~~~-------~~~Gf~v~y~l~~ff~NFG 422 (538)
T KOG0252|consen 363 PGYWFTVYFIDII-GRKYIQLMGFFIMTIFFFVIAGP------------YNQLE-------NTIGFVVLYSLTFFFGNFG 422 (538)
T ss_pred CceeEEEEEeehh-hhHHHHHhhHHHHHHHHHHHcCC------------ccccc-------ccCceeehHHHHHHHHhcC
Confidence 4777788899997 99999999999888877777653 23200 1222222222233455555
Q ss_pred ccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhcc-----ccccchhHHHHHHHHHHHHHHHHh
Q 007736 163 LKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQD-----NLGREWGYGICACAIVFGLVVFLS 237 (591)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~-----~~g~~~~f~~~~~~~~~~~~~~~~ 237 (591)
.......+.+|.||.+. |++.-|+.-.+.=.|++++.....++.+ ..|.+..|++.+.+.+++.+..++
T Consensus 423 Pn~ttfivpaE~FParv------R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l 496 (538)
T KOG0252|consen 423 PNATTFIVPAEIFPARV------RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLL 496 (538)
T ss_pred CCceeEEeehhhchHHH------hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEE
Confidence 56677788899999999 9999999888899999999999999988 678899999888877777665443
No 251
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.54 E-value=0.048 Score=59.22 Aligned_cols=164 Identities=9% Similarity=0.044 Sum_probs=103.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC-----ChHHHHHHHHHHHHHHHHH-HhhhHHHhhhhchhHHHHHH
Q 007736 31 WTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHL-----GNASAANTVTNFLGTSFML-CLLGGFIADTFLGRYLTIAI 104 (591)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~-----~~~~~~~~~~~~~~~~~i~-~~~~G~laD~~~Grk~~~~~ 104 (591)
++.++...+..||....|+.+-+ +.+.+.. +.....++-+...+...+. .++.+++++|+ +|++.+.+
T Consensus 6 ~~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~~ 79 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFYT 79 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHHH
Confidence 45677777777887777665544 4555544 4467788877666665555 89999999997 99999988
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCc-ccccchh------------HHHHHHHHHHHHHhccccccc-ccccc
Q 007736 105 FATVQAAGVTILTISTIIPSLRPPKCNLNHGQS-CIQASGM------------QLVVLYIALYLTALGTGGLKS-SVSGF 170 (591)
Q Consensus 105 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------------~~~~~~~~~~l~g~g~g~~~~-~~~~~ 170 (591)
....+..-..++++.. .|. ...-|+.. |+..... +.+..-+.-+...+-.....+ ..+++
T Consensus 80 ~~~~F~~~f~lF~~vl-~p~-----~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~f 153 (472)
T TIGR00769 80 VISPFLGFFALFAFVI-YPL-----SDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGF 153 (472)
T ss_pred HHHHHHHHHHHHHHHH-hcc-----hhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777666666542 121 11111110 0000000 011111111112222222233 66899
Q ss_pred ccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhc
Q 007736 171 GSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQ 212 (591)
Q Consensus 171 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~ 212 (591)
..|.+..++ -.|.++++..+.|+|..+++.+..++.
T Consensus 154 andi~t~~q------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 154 ANQITTIDE------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998 889999999999999999999888876
No 252
>PTZ00207 hypothetical protein; Provisional
Probab=97.35 E-value=0.0015 Score=72.84 Aligned_cols=127 Identities=14% Similarity=0.116 Sum_probs=87.5
Q ss_pred hhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHH
Q 007736 398 VYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGA 477 (591)
Q Consensus 398 l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~ 477 (591)
+.+++.+|+++| +.+.+|.++..++.+++++... +. ...+.+.+.+..++.|+
T Consensus 80 p~G~L~Dr~G~R-----------~vllig~ll~~iG~ll~ala~~---------~~-------i~~s~~~l~l~r~l~G~ 132 (591)
T PTZ00207 80 PYSFIYDYLGPR-----------PIFVLSMTVFCLGTLLFALTFQ---------EV-------IEGSVVRLSVYNGLMTL 132 (591)
T ss_pred HHHHHHHHhCcH-----------HHHHHHHHHHHHHHHHHHHHhc---------cc-------ccCcHHHHHHHHHHHHH
Confidence 456666544444 6688999999999988877421 00 11356667777889999
Q ss_pred HHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHH
Q 007736 478 GEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSAL 557 (591)
Q Consensus 478 g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v 557 (591)
|.+...+.....+.+.+| +.||.++|+......+|+.+.+.+...+... + ...+|++++++.++
T Consensus 133 G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~-----~----------~~~~fl~l~vl~~v 196 (591)
T PTZ00207 133 GCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD-----N----------TSAYFFFLMSFALV 196 (591)
T ss_pred HHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----h----------HHHHHHHHHHHHHH
Confidence 998888777777888887 6799999999999999998655444443321 1 23467777777777
Q ss_pred HHHHHHHHhh
Q 007736 558 NFVIYLAFAR 567 (591)
Q Consensus 558 ~~~~~~~~~~ 567 (591)
..++.+.+.+
T Consensus 197 v~ll~~~~vr 206 (591)
T PTZ00207 197 VGILAIVFMR 206 (591)
T ss_pred HHHHHHhhee
Confidence 7666555544
No 253
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.06 E-value=0.01 Score=54.40 Aligned_cols=103 Identities=14% Similarity=0.133 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHH
Q 007736 74 VTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIAL 153 (591)
Q Consensus 74 ~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (591)
.++......+.+++.+.+.+++ |.|+.++++.+.+.+-...... .+.+.++.+-
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~~~~-------------------------~~~~~l~~~s 96 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIASFFY-------------------------PNSYTLYPAS 96 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHh-------------------------hhHHHHHHHH
Confidence 4455566777888888899997 9999999998877754443322 3677888999
Q ss_pred HHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhh
Q 007736 154 YLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVL 208 (591)
Q Consensus 154 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~ 208 (591)
++.|+|.+..+.....++.+..+++. +++..+++....+.+..+|.++.
T Consensus 97 ~l~G~~~a~lW~aqg~ylt~~s~~~~------~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 97 ALLGFGAALLWTAQGTYLTSYSTEET------IGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred HHHhhhhHHhhHhhhHHHHHcCCHHH------HhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888777 88888887766666666665544
No 254
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=96.97 E-value=0.0055 Score=68.07 Aligned_cols=155 Identities=10% Similarity=-0.027 Sum_probs=109.9
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChH---HHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHH-
Q 007736 27 KTGGWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNA---SAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTI- 102 (591)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~- 102 (591)
..+..|.+...++..++..+.+|.+..+.|......++-+.. ..++....+.++..++..+.|.+.-++ ||-|..
T Consensus 305 Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~i-r~~Kw~l 383 (599)
T PF06609_consen 305 LFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKI-RHIKWQL 383 (599)
T ss_pred HhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHc-cchhHHH
Confidence 334457778888888899989999888888888777766553 567777777888889999999999886 776654
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhh
Q 007736 103 AIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQE 182 (591)
Q Consensus 103 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 182 (591)
+++..++.++.-+++... | .+........++.|+|.|...........-..|+++
T Consensus 384 i~~~~~~ta~~Gama~~~--~--------------------~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~--- 438 (599)
T PF06609_consen 384 IFGSVLMTAFCGAMAAVR--P--------------------DNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDED--- 438 (599)
T ss_pred HHHHHHHHHHHHHHHHcc--C--------------------CCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchH---
Confidence 466555555444444431 1 233334455667788888776666666666678777
Q ss_pred hhccchhhhhhHHHHhhchhhhhhhhhh
Q 007736 183 RNQMTNFFNWFFFFISIGSLAAVTVLVY 210 (591)
Q Consensus 183 ~~~r~~~~~~~~~~~~ig~~~~p~i~~~ 210 (591)
.+.+.++....-.+|+.+|..+..-
T Consensus 439 ---ig~a~gL~~s~R~~GGsIg~aIy~~ 463 (599)
T PF06609_consen 439 ---IGTATGLTGSIRSIGGSIGYAIYNA 463 (599)
T ss_pred ---HHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 8999999888888888888765543
No 255
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.88 E-value=0.0038 Score=69.20 Aligned_cols=137 Identities=14% Similarity=0.158 Sum_probs=100.0
Q ss_pred cccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcc
Q 007736 383 SLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIP 462 (591)
Q Consensus 383 ~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 462 (591)
...++..++.+++..+.+.+.++++|| ..+.+++++.+++-+..++.
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk-----------~~~~~~~~~~~i~~~~~a~a---------------------- 168 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRK-----------PVLLVSLLLFIIFGILTAFA---------------------- 168 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccH-----------HHHHHHHHHHHHHHHHHHHh----------------------
Confidence 345555666677777777777765565 45777777777776555553
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCc
Q 007736 463 LSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQG 542 (591)
Q Consensus 463 ~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~ 542 (591)
.+++..++.-++.|++........+.++.|..+++.|+.++.+ ......++.+++.+.+++.. +|
T Consensus 169 ~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~------~W-------- 233 (521)
T KOG0255|consen 169 PNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR------DW-------- 233 (521)
T ss_pred CcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh------hH--------
Confidence 4677778888999999999999999999999999999999999 87888888888888888863 44
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 007736 543 RLYDFYWLLAILSALNFVIYLAFARWYV 570 (591)
Q Consensus 543 ~~~~~f~~~~~~~~v~~~~~~~~~~~~~ 570 (591)
...+++..+...+.++. +++.++.+
T Consensus 234 --r~~~~~~~~~~~~~~~~-~~l~~Es~ 258 (521)
T KOG0255|consen 234 --RWLFWIISIPSGLFLLL-WFLPPESP 258 (521)
T ss_pred --HHHHHHHHHHHHHHHHH-HHccCcCh
Confidence 24566666666655544 44443433
No 256
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.84 E-value=0.02 Score=64.49 Aligned_cols=176 Identities=14% Similarity=0.151 Sum_probs=116.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH-HHHHHHHhhhHHHhhhh-chhHHHHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFL-GTSFMLCLLGGFIADTF-LGRYLTIAIFATVQA 110 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~G~laD~~-~Grk~~~~~~~~~~~ 110 (591)
......++..++...+-++.+++|-|+.++++.+...+..+.+... -+..++..++|++..|+ +..|.+..+.++...
T Consensus 393 if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~ 472 (735)
T KOG3626|consen 393 IFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSV 472 (735)
T ss_pred hHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHH
Confidence 4455567788899999999999999999999999999999986665 55669999999999996 344555555554444
Q ss_pred HHHHHHHHHhhc-----------------C--------------------CCCCCCCCCC------------------C-
Q 007736 111 AGVTILTISTII-----------------P--------------------SLRPPKCNLN------------------H- 134 (591)
Q Consensus 111 i~~~l~~~~~~~-----------------~--------------------~~~~~~~~~~------------------~- 134 (591)
+..+.......+ | ..-.|+|..| .
T Consensus 473 l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~ 552 (735)
T KOG3626|consen 473 LSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSD 552 (735)
T ss_pred HHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCC
Confidence 444331111000 0 1123444443 1
Q ss_pred ------CCcccc----------------cchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhh
Q 007736 135 ------GQSCIQ----------------ASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNW 192 (591)
Q Consensus 135 ------~~~~~~----------------~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 192 (591)
.-+|.+ .-...+..+++..++..+..+...++...++-+.+++++ |.-++|+
T Consensus 553 ~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~------ks~AlG~ 626 (735)
T KOG3626|consen 553 GNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEE------KSFALGF 626 (735)
T ss_pred CceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchh------chhhhHH
Confidence 223443 111233344444444445555555677788889999999 9999999
Q ss_pred hHHH-Hhhchhhhhhhhhhhccc
Q 007736 193 FFFF-ISIGSLAAVTVLVYIQDN 214 (591)
Q Consensus 193 ~~~~-~~ig~~~~p~i~~~l~~~ 214 (591)
..+. .-+|.+-+|++-|++.|.
T Consensus 627 ~~~~irllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 627 QWMLIRLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred HHHHHHHHhcCCchHhhhhhHhh
Confidence 5555 557888899999998763
No 257
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.84 E-value=0.018 Score=61.71 Aligned_cols=154 Identities=11% Similarity=-0.015 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHH
Q 007736 34 AAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGV 113 (591)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 113 (591)
++...++..+-.++..+.-..+..|+... |++...++..-+...+.+..+.....++.+|+ |..|+=.+++.......
T Consensus 260 vflas~alalLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L 337 (432)
T PF06963_consen 260 VFLASFALALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCL 337 (432)
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHH
Confidence 34444444444555556666788898866 99999999999999999999999999999998 99999999988888777
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhh
Q 007736 114 TILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWF 193 (591)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 193 (591)
.++..+...|.-. ....+...++.+.++.=+|.=++--....++-|..|+++ |++..+..
T Consensus 338 ~~~v~~~~~~~~~--------------~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~------Rg~v~gvq 397 (432)
T PF06963_consen 338 ALCVVSFWAPGSP--------------FSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE------RGAVSGVQ 397 (432)
T ss_pred HHHHHHHhcCCCC--------------chhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH------hhHHHHHH
Confidence 7777665444100 011355556666666667888888888999999999999 99999998
Q ss_pred HHHHhhchhhhhhhhh
Q 007736 194 FFFISIGSLAAVTVLV 209 (591)
Q Consensus 194 ~~~~~ig~~~~p~i~~ 209 (591)
+...++.-.+-..++-
T Consensus 398 ~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 398 NSLQSLFELLSFVLTI 413 (432)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8888888877755443
No 258
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=96.84 E-value=0.33 Score=51.14 Aligned_cols=57 Identities=19% Similarity=0.224 Sum_probs=46.5
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 007736 464 SVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLL 520 (591)
Q Consensus 464 ~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l 520 (591)
+-+|.+....++|+..+-.....+.+..+.+|++.+..+..+..+....|-..|..+
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~ 398 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLL 398 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 446667778888988888888888999999999999888888887777777777665
No 259
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.82 E-value=0.0049 Score=66.76 Aligned_cols=152 Identities=13% Similarity=0.087 Sum_probs=117.7
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHH-HHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhH-HHhhhhchhHHHHHHHHH
Q 007736 30 GWTSAAMILGGEACERLTTLGIAV-NLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGG-FIADTFLGRYLTIAIFAT 107 (591)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~-~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G-~laD~~~Grk~~~~~~~~ 107 (591)
+.|..+.++...+.....-.+-.. .++.|+...++++..+.+...+.......+++++.. .+.-. +|-|+++..|++
T Consensus 238 ~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~-l~~~~~i~lGl~ 316 (463)
T KOG2816|consen 238 PDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI-LGEKRLISLGLL 316 (463)
T ss_pred CCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhHhhHHHH
Confidence 444555555555443333322222 456788889999999999999999999999999998 55555 499999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccc
Q 007736 108 VQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMT 187 (591)
Q Consensus 108 ~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 187 (591)
...+...+.+++ ...++.+....+.++ .....+...++.+.+.++++ ++
T Consensus 317 ~~~~~~~~~af~------------------------~~~w~~~~~~v~~~~-~~~~~pa~~s~~s~~v~~~e------~g 365 (463)
T KOG2816|consen 317 SEFLQLLLFAFA------------------------TETWMMFAAGVVVAL-AGIVFPAIRAFASILVSPEE------QG 365 (463)
T ss_pred HHHHHHHHHHHh------------------------ccchhhhHHHHHHHh-hcchhHHHHhHHHhhccccc------cc
Confidence 999999999998 356666666655554 45556888999999999999 99
Q ss_pred hhhhhhHHHHhhchhhhhhhhhhhcc
Q 007736 188 NFFNWFFFFISIGSLAAVTVLVYIQD 213 (591)
Q Consensus 188 ~~~~~~~~~~~ig~~~~p~i~~~l~~ 213 (591)
+.+++......+.+.++|.+-+.+..
T Consensus 366 ~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 366 KVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred chhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 99999999999999999998876643
No 260
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.79 E-value=0.0086 Score=64.55 Aligned_cols=160 Identities=11% Similarity=0.026 Sum_probs=94.1
Q ss_pred ccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccc
Q 007736 384 LTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPL 463 (591)
Q Consensus 384 ~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 463 (591)
..+...++.++..|+.++...|.. +..+.++.|.++++++.+++..++.. .+-
T Consensus 76 viaa~slg~~i~~liF~~Ws~k~~----------~~k~Pli~s~ii~~~g~llY~~l~~~-----------------~~~ 128 (488)
T KOG2325|consen 76 VIAASSLGHAIFSLIFGIWSNKTG----------SVKKPLIVSFLIAIIGNLLYLALAYV-----------------PNG 128 (488)
T ss_pred HHHHHHHHHHhcchhhcccccccC----------CcccCHHHHHHHHHHHHHHHHHHHhc-----------------ccc
Confidence 344455666677777766553222 12355899999999999999666421 122
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcc
Q 007736 464 SVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGR 543 (591)
Q Consensus 464 ~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~ 543 (591)
.-+++.+..++.|+|.+..... -.|+++..-.+.|.++++..+....+|..+||.+...+.......-.|.++ ..-+.
T Consensus 129 ~~y~mL~~R~l~Gvg~~n~a~l-R~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~-~~~n~ 206 (488)
T KOG2325|consen 129 VKYLMLVARILTGVGVGNFAVL-RAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPG-LIFNM 206 (488)
T ss_pred hHHHHHHHHHHcCcCcccHHHH-HHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCc-ceEEe
Confidence 5677888899999996554433 345555444444555555555555666666666655443322211123332 22222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 007736 544 LYDFYWLLAILSALNFVIYLAFARWYVYK 572 (591)
Q Consensus 544 ~~~~f~~~~~~~~v~~~~~~~~~~~~~~~ 572 (591)
++..-|+.+++.++.+++.+++.+|..+.
T Consensus 207 YTap~w~m~i~~i~~~v~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 207 YTAPAWLMAILWIIYIVIILFFFKEVYRG 235 (488)
T ss_pred cchHHHHHHHHHHHHHHHHHhheeecccC
Confidence 33455677777888887777777765544
No 261
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.70 E-value=0.011 Score=61.04 Aligned_cols=133 Identities=14% Similarity=0.086 Sum_probs=102.7
Q ss_pred HHHHHHHh-hhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhch-hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 007736 52 AVNLVTYL-TGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLG-RYLTIAIFATVQAAGVTILTISTIIPSLRPPK 129 (591)
Q Consensus 52 ~~~l~~yl-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~G-rk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~ 129 (591)
..+...++ .+.+|.++.|.|-+.+...+.+.+.++..+...||..| -+-.+..++.+..-..++....
T Consensus 280 ~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~---------- 349 (451)
T KOG2615|consen 280 LENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLA---------- 349 (451)
T ss_pred HHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcc----------
Confidence 33334444 57899999999999888888888888888888998733 3444444444444444555544
Q ss_pred CCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhh
Q 007736 130 CNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLV 209 (591)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~ 209 (591)
.....++.+..+-.+..+...+....++....|.++ ||...|+....++++-++||.++|
T Consensus 350 --------------~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~q------rG~~~Gi~~Sl~alaRaiGPlv~g 409 (451)
T KOG2615|consen 350 --------------RTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQ------RGTLNGIFRSLGALARAIGPLVSG 409 (451)
T ss_pred --------------ccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCccc------chHHHHHHHHHHHHHHHhhhhhhh
Confidence 355677888888888888888888999999999998 999999999999999999999998
Q ss_pred hhccc
Q 007736 210 YIQDN 214 (591)
Q Consensus 210 ~l~~~ 214 (591)
.+...
T Consensus 410 ~i~~W 414 (451)
T KOG2615|consen 410 VIFSW 414 (451)
T ss_pred eeEEE
Confidence 87653
No 262
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.66 E-value=0.021 Score=46.31 Aligned_cols=72 Identities=7% Similarity=-0.043 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHHHHHHHH
Q 007736 46 LTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGVTILTIS 119 (591)
Q Consensus 46 ~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~ 119 (591)
++.+.+.+.+|. ++++.++|.++.+++.+...+++.++.+...++.++. .+++.+..+++...+..+.+++.
T Consensus 6 igRFayTplLP~-M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 6 IGRFAYTPLLPL-MQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred hHHHHHHhHhHH-HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555565554 5678899999999999999999999999999999996 88899999999999999998886
No 263
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.46 E-value=0.00073 Score=74.83 Aligned_cols=176 Identities=16% Similarity=0.155 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHH-HHHHHHhhhHHHhhhh-chhHHHHHHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLG-TSFMLCLLGGFIADTF-LGRYLTIAIFATVQA 110 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~G~laD~~-~Grk~~~~~~~~~~~ 110 (591)
.+....+...++....-++.+++|-|++.+++++..+++.+.+...+ +..++.+++|++..|+ ++.|+++....+...
T Consensus 306 ~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~ 385 (539)
T PF03137_consen 306 VFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSI 385 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHH
Confidence 34444556677888888999999999999999999999998877654 7779999999999996 334554444444333
Q ss_pred HHHHH----HHHHhhcCCC------------------CCCCCCCC--------CCCcccccchhHHHHHHHHHHHHHhcc
Q 007736 111 AGVTI----LTISTIIPSL------------------RPPKCNLN--------HGQSCIQASGMQLVVLYIALYLTALGT 160 (591)
Q Consensus 111 i~~~l----~~~~~~~~~~------------------~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~g~g~ 160 (591)
++.++ +.+.+..+.+ ...-||.+ ..-.|...=...+..+++..++..+..
T Consensus 386 v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~ 465 (539)
T PF03137_consen 386 VSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFT 465 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHH
Confidence 33322 1111111100 11122221 122333331123445555555555666
Q ss_pred ccccccccccccCCCCCCChhhhhccchhhhhhHHH-Hhhchhhhhhhhhhhccc
Q 007736 161 GGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFF-ISIGSLAAVTVLVYIQDN 214 (591)
Q Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~ig~~~~p~i~~~l~~~ 214 (591)
+.........+-+.+|+++ |+-+.|+.... --+|.+-||++.|.+.|.
T Consensus 466 ~~~~~p~~~i~LR~V~~~~------rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 466 FMSQVPSTLITLRCVPPEQ------RSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp -------------------------------------------------------
T ss_pred HhcccchheeeeccCChhh------cchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 6666666777779999999 99999995544 457888899999988875
No 264
>PRK03612 spermidine synthase; Provisional
Probab=96.30 E-value=0.16 Score=56.09 Aligned_cols=173 Identities=13% Similarity=0.041 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHH-HHHHHHH-HHHHH
Q 007736 38 LGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIA-IFATVQA-AGVTI 115 (591)
Q Consensus 38 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~-~~~~~~~-i~~~l 115 (591)
....++...+..+.-......+...+|-+..+.+.+++++..+..++..++|+++++. -|+.... +.+.+.+ ++..+
T Consensus 20 ~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~~~~e~~i~l~~~~~~~l 98 (521)
T PRK03612 20 LAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGFVAVELLLALLGGLSALI 98 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444555555556666788889999999999999999999999988553 2332221 1111111 11111
Q ss_pred HHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHH
Q 007736 116 LTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFF 195 (591)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 195 (591)
..... +. ........+...++.++..|+..|....+..+... ++ -++..|-.+.
T Consensus 99 l~~~~--~~-----------------~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~------~g~~~g~ly~ 152 (521)
T PRK03612 99 LYAAF--AF-----------------QGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QH------LGHNVATVLA 152 (521)
T ss_pred HHHHH--HH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cc------hhhhhhhhHh
Confidence 11110 00 00111122333344566666666665555543222 12 3455666777
Q ss_pred HHhhchhhhhhhhhhhcc-cccc-chhHHHHHHHHHHHHHHHHh
Q 007736 196 FISIGSLAAVTVLVYIQD-NLGR-EWGYGICACAIVFGLVVFLS 237 (591)
Q Consensus 196 ~~~ig~~~~p~i~~~l~~-~~g~-~~~f~~~~~~~~~~~~~~~~ 237 (591)
...+|+++|.++.+++.- ..|- +..+.+..+..+++++.++.
T Consensus 153 ~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~~~~ 196 (521)
T PRK03612 153 ADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVFLWL 196 (521)
T ss_pred HHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 788889999888886643 5663 34444444444444444333
No 265
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=95.97 E-value=0.0064 Score=65.03 Aligned_cols=118 Identities=17% Similarity=0.132 Sum_probs=88.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcch--
Q 007736 421 QRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGM-- 498 (591)
Q Consensus 421 ~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~-- 498 (591)
+.+..|.++++++.++++..+ ......+.+.++++++|.++.-|...+++.|++|++.
T Consensus 93 ~tI~lGail~~iGh~~L~~~~--------------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr 152 (498)
T COG3104 93 RTIVLGAILMAIGHLVLAISS--------------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR 152 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccc--------------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc
Confidence 669999999999999998631 1245566778888889999999998889999887643
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 007736 499 KTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWYVYK 572 (591)
Q Consensus 499 rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~ 572 (591)
|..+.+++-..-++|+.+++.+.+++....+ +...|...++-+.++.+.+++..++.+..
T Consensus 153 rD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g--------------~~~gF~~aavGm~~gl~~f~~~~r~~~~~ 212 (498)
T COG3104 153 RDGGFTLFYMGINIGSLIAPIITGLLAINYG--------------WHVGFGLAAVGMIIGLVIFLLGRRHVKGI 212 (498)
T ss_pred cCCCccEEEEEeehHHHHHHHHHHHHHHhhC--------------HHHHHHHHHHHHHHHHHHHHHccchhcCC
Confidence 5566677777788999999999999975432 34567777777777777776665555544
No 266
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=95.89 E-value=0.055 Score=53.64 Aligned_cols=121 Identities=20% Similarity=0.244 Sum_probs=78.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcc
Q 007736 418 TPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKG 497 (591)
Q Consensus 418 ~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~ 497 (591)
++...+.+|.+...+++.++..... |.. ...+.|.+....++.+.+.............+.+|.
T Consensus 64 gp~~~l~iG~~~~~~GY~~~~l~~~---------~~i------~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~- 127 (250)
T PF06813_consen 64 GPWVVLLIGAVLGFVGYGLLWLAVS---------GRI------PSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR- 127 (250)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHh---------Ccc------CccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-
Confidence 4446688899999999887766531 100 124556565556666676666555555555688885
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHHHhhhc
Q 007736 498 MKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWY 569 (591)
Q Consensus 498 ~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~ 569 (591)
.||++.|+.-....+++.+-+.+...+... +.+.++.+++....+..++...+.+..
T Consensus 128 ~RG~vvgilk~~~GLSaai~t~i~~~~f~~---------------~~~~fll~la~~~~~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 128 SRGTVVGILKGFFGLSAAIFTQIYSAFFGD---------------DPSSFLLFLAVLPAVVCLVAMFFVRPV 184 (250)
T ss_pred ccCceehhhhHHHHhHHHHHHHHHHHHcCC---------------ChHHHHHHHHHHHHHHHHHHhhheecc
Confidence 699999999999999999888887766531 233455556655555544444444444
No 267
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.08 E-value=0.091 Score=55.50 Aligned_cols=123 Identities=15% Similarity=0.144 Sum_probs=79.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcc---
Q 007736 421 QRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKG--- 497 (591)
Q Consensus 421 ~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~--- 497 (591)
+.+.+|.++..++++++.+.... + ..+ ...+...+.+.+++.++|.+..-|+...+..|.++++
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~-----~----~~~----~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~ 68 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIP-----P----SLP----SGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDS 68 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTS-----S----SC----------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTT
T ss_pred HhhhHHHHHHHHHHHHhHHHHhc-----c----hhh----hhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchh
Confidence 34788999999998887664310 0 000 1233466778888999999999999999999999876
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 007736 498 MKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARWYV 570 (591)
Q Consensus 498 ~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~ 570 (591)
.|......+-...++|..++..+.+++.+.. + +...|++.++.++++.+.++.-.++++
T Consensus 69 ~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~----~----------~~~~f~i~~~~~~~~~~~f~~~~~~y~ 127 (372)
T PF00854_consen 69 RRDSFFNWFYWGINIGSLFSPTLVPYIQQNY----G----------WFLGFGIPAIGMLLALIVFLSGRKRYR 127 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS---------------HHHHHHHHHHHHHHHHHHHHCCCCTT-
T ss_pred hhhhhHHHHHHHHhhhhHhhcccchhhcccc----c----------hhhhhhHHHHHHHHHHHHHHhCCcCCc
Confidence 3555666677888999999999888886432 2 334566666666666554444333333
No 268
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.65 E-value=0.19 Score=54.31 Aligned_cols=115 Identities=20% Similarity=0.217 Sum_probs=77.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccC---Ccc
Q 007736 421 QRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLREC---PKG 497 (591)
Q Consensus 421 ~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~---p~~ 497 (591)
.-+++|.++.+++.+.++.... ...+.....+.+++..+|..+.....-++..|.. |.+
T Consensus 60 ~Y~~i~~~~~~~~~~~~~~~~~------------------~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~ 121 (433)
T PF03092_consen 60 PYMIIGWLLGAVSALVLALLPA------------------SESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES 121 (433)
T ss_pred HHHHHHHHHHHHHHHHHHhccc------------------ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch
Confidence 3367777777766666665421 1123334455667788888888876666666655 444
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 007736 498 MKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQGRLYDFYWLLAILSALNFVIYLAFARW 568 (591)
Q Consensus 498 ~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~ 568 (591)
+|..++....++.+|+.++..+.|.+.+..+ ....|.+.+++..+..+..+++.++
T Consensus 122 -~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~--------------~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 122 -RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG--------------PQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC--------------CeEEehHHHHHHHHHHHHHHHhhhh
Confidence 7888999999999999999999988875432 2234666777777776666666665
No 269
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=94.64 E-value=0.17 Score=57.45 Aligned_cols=64 Identities=25% Similarity=0.580 Sum_probs=59.5
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007736 461 IPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLV 524 (591)
Q Consensus 461 ~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i 524 (591)
.+++.+|.++++++.+.|+.+.......+..+.+|+++|+..++++.+..++|+.+...+...-
T Consensus 561 ~~~~~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~ 624 (654)
T TIGR00926 561 NTVSILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEFE 624 (654)
T ss_pred CceeHHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4578899999999999999999999999999999999999999999999999999998887654
No 270
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=94.00 E-value=5.9 Score=42.99 Aligned_cols=63 Identities=13% Similarity=0.103 Sum_probs=51.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 007736 466 FWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVT 528 (591)
Q Consensus 466 ~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~ 528 (591)
..+++..++..+....-+.+..++-.+++.|.+-|++|.+.|+.+++|+---..++-++.|..
T Consensus 406 ~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 406 LLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYF 468 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhc
Confidence 444555667777777777888899999999999999999999999999988887777776643
No 271
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=93.92 E-value=11 Score=40.74 Aligned_cols=57 Identities=12% Similarity=0.191 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 007736 465 VFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLV 521 (591)
Q Consensus 465 ~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~ 521 (591)
-++.++..+++|+..+......+.+..+.++++.|..+..+..+...+|-.+|+.+.
T Consensus 372 d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 372 DAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred cHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566688999999988888888899999999999999999999899988888774
No 272
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=93.69 E-value=0.35 Score=51.28 Aligned_cols=61 Identities=13% Similarity=0.050 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhh
Q 007736 145 QLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYI 211 (591)
Q Consensus 145 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l 211 (591)
+.+.+++..+..|+..|..+.+....+.|..|+++ |.-+++...++-.+|..++..++-.+
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~------REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPED------REFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 67777778888899999999999999999999888 99999999988888888887766444
No 273
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=93.67 E-value=0.17 Score=53.75 Aligned_cols=162 Identities=9% Similarity=-0.100 Sum_probs=95.0
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cCCC----------------hHHHHHHHHHHHHHHHHHHhhh
Q 007736 26 SKTGGWTSAAMILGGEACERLTTLGIAVNLVTYLTGT-MHLG----------------NASAANTVTNFLGTSFMLCLLG 88 (591)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-~~~~----------------~~~~~~~~~~~~~~~~i~~~~~ 88 (591)
..+..+|.++.+++..++..++.+...-+...++-++ ++-+ ...-.|=..++.+...+.+...
T Consensus 273 ~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~ 352 (498)
T KOG0637|consen 273 ALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLV 352 (498)
T ss_pred hHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHH
Confidence 4455778999999999998888776666666555332 1111 1122233556677888889999
Q ss_pred HHHhhhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhcccccccc--
Q 007736 89 GFIADTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSS-- 166 (591)
Q Consensus 89 G~laD~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~-- 166 (591)
-++.||+ |-|+.++.+...+.++..+.++. .+......-+...|+-.+.....
T Consensus 353 ~~l~~~~-g~r~~y~~~~~~f~~~~~~~gl~------------------------~~~~~~~~~~~~~G~~~~~~~~~p~ 407 (498)
T KOG0637|consen 353 EKLSRKF-GTRKRYWGGVNAFGLATGLAGLV------------------------LNTYVVLSHRSTAGILSSPLLTVPY 407 (498)
T ss_pred HHHHHhc-CcceEEeehhHHHHHHHHHHhhh------------------------hhHHHHHHHHhhcceeecchhcccH
Confidence 9999998 86666665555455555555543 13333333333333222222222
Q ss_pred -------------------ccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccccc
Q 007736 167 -------------------VSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDNLG 216 (591)
Q Consensus 167 -------------------~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g 216 (591)
..+..+.-..+.. .+++..++..+....+-.++.....|.+.+..|
T Consensus 408 ~l~~~y~~~g~~~a~t~~~pf~~~s~~~~~sg----~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G 472 (498)
T KOG0637|consen 408 GALALYAILGIPLAITFSIPFALASIEIGNSG----LGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFG 472 (498)
T ss_pred HHHHHHHHhCCccccccccccccccccccCcc----CCCCceeeeeeeeeeehhheeeccccchhhhcC
Confidence 2222221111111 225677777888888888888777787777765
No 274
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=93.41 E-value=14 Score=40.13 Aligned_cols=163 Identities=12% Similarity=0.050 Sum_probs=103.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC---CChHHHHHHHHHHHH-HHHHHHhhhHHHhhhhchhHHHHHHH
Q 007736 30 GWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMH---LGNASAANTVTNFLG-TSFMLCLLGGFIADTFLGRYLTIAIF 105 (591)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~---~~~~~~~~~~~~~~~-~~~i~~~~~G~laD~~~Grk~~~~~~ 105 (591)
.++.+..+.++.+|..+.+..+-. +.+.+- .++..+..+-....+ +..+..++.+++.+++ -|.+++.+.
T Consensus 25 E~~kflpl~Ll~f~I~~ny~~lR~-----lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~~~ 98 (509)
T COG3202 25 ELKKFLPLALLFFCILFNYNLLRS-----LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFYII 98 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHHHH
Confidence 456777777877777665443332 344433 445666777666666 6778899999999997 999999998
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCCCC---cc-----cc-c--------chhHHHHHHHHHHHHHhccccc-cccc
Q 007736 106 ATVQAAGVTILTISTIIPSLRPPKCNLNHGQ---SC-----IQ-A--------SGMQLVVLYIALYLTALGTGGL-KSSV 167 (591)
Q Consensus 106 ~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~---~~-----~~-~--------~~~~~~~~~~~~~l~g~g~g~~-~~~~ 167 (591)
+..+....+++++... | .|..-|+. +- .+ . ...+...+++. .-+=.... .-.-
T Consensus 99 ~~~F~~fF~LFa~Vi~-P-----~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~---aELWgslV~S~lF 169 (509)
T COG3202 99 LGFFLGFFALFAFVIY-P-----YKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIM---AELWGSLVLSLLF 169 (509)
T ss_pred HHHHHHHHHHHHHHHh-c-----cccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHH---HHHHHHHHHHHHH
Confidence 8888888888887632 3 33333443 10 00 0 00111111111 11111111 1134
Q ss_pred cccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhcc
Q 007736 168 SGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQD 213 (591)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~ 213 (591)
+...-|.+..++ -.|.+++++...|++..++..+..++..
T Consensus 170 w~faNeitt~~e------akRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 170 WQFANEITTIEE------AKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHhhhHHH------hhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 567778888888 7899999999999999999888888765
No 275
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=92.22 E-value=1.3 Score=40.49 Aligned_cols=62 Identities=18% Similarity=0.331 Sum_probs=53.7
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007736 464 SVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVH 525 (591)
Q Consensus 464 ~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~ 525 (591)
+.+.+++.-++.|++.++.....-.++.+...++.+++-.|++......+..+|..+.-.+.
T Consensus 88 ~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 88 NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677888899999999999998889999999999999999999999988888887765543
No 276
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.19 E-value=1.6 Score=47.27 Aligned_cols=116 Identities=17% Similarity=0.134 Sum_probs=80.0
Q ss_pred HHHHHHHHhhhHHHhhhh--chhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHH
Q 007736 78 LGTSFMLCLLGGFIADTF--LGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYL 155 (591)
Q Consensus 78 ~~~~~i~~~~~G~laD~~--~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 155 (591)
..+..++.++.+.+++|. .||++++.++..+..++.++.-++. |... +.+|-.+...-..++....++.-++
T Consensus 289 g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~--p~da----p~~~t~~~~~~~~~~~~~~~ii~~l 362 (461)
T KOG3098|consen 289 GLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSF--PNDA----PLRPTDSPPLLFTPSYYLALIIGFL 362 (461)
T ss_pred hHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccc--cccC----CCCCCcccccccccchhHHHHHHHH
Confidence 355556667777777663 4899999999999998888887763 2111 1222233333333456667777888
Q ss_pred HHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhh
Q 007736 156 TALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVT 206 (591)
Q Consensus 156 ~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~ 206 (591)
+|++-++.....+.++.+.+| ++ |..+++++-+-..+++.++-.
T Consensus 363 ~G~~D~~~~t~~~~ii~~~~~-~~------~~~~fsi~kfyq~~~s~v~~f 406 (461)
T KOG3098|consen 363 LGFGDACFNTQRYVIIALLYP-DD------RAQAFSLFKFYQSVASCVAFF 406 (461)
T ss_pred HhhHHHHHHHHHHHHHHHHhc-Cc------hHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999994 44 677777776666666655433
No 277
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=91.66 E-value=1.8 Score=44.25 Aligned_cols=117 Identities=12% Similarity=-0.007 Sum_probs=70.8
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHH
Q 007736 28 TGGWTSAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFAT 107 (591)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~ 107 (591)
+...|+++.+-...+....++-+ ..+|-+.+..++| ....+.+ .......+++.+.+..++ |-|.++.++..
T Consensus 25 ~~~~knv~i~s~~fl~~f~a~~g-l~nlq~~vn~~lg--~~sl~~~----y~~l~~s~m~~~~~Ir~~-g~K~tm~lav~ 96 (390)
T KOG3097|consen 25 LGILKNVLILSIAFLLTFTAYLG-LQNLQTSVNYDLG--TVSLGAL----YLSLIDSSMFMPLLIRFL-GTKWTMVLAVF 96 (390)
T ss_pred cchhhhhhHHHHHHHHHHHHHHH-HHHHHHHHhcCcc--cchhhhh----hHHHHHHHHHHHHHHHHH-hhHHHHHHHHH
Confidence 34456666665555554444444 4455555443332 2222222 233445555555777775 99999999877
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCC
Q 007736 108 VQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDD 177 (591)
Q Consensus 108 ~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 177 (591)
.+.......-. +.+..+.-+-++.|+|.+..+.+-.+++++.-..
T Consensus 97 ~Y~lyiA~Nl~-------------------------pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ 141 (390)
T KOG3097|consen 97 PYALYIAANLE-------------------------PRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQN 141 (390)
T ss_pred HHHHHHHhhcc-------------------------hhHHhhccHHHhhccccccccccCcceecHHHHH
Confidence 66653322211 3666677778889999999999988888876443
No 278
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=91.37 E-value=5.1 Score=41.68 Aligned_cols=111 Identities=11% Similarity=-0.024 Sum_probs=63.6
Q ss_pred ccccccchhhhhhhhhhhhhhhhhhhhhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCc
Q 007736 382 ASLTFFFVGSILLTVPVYDRIIVPIARKVFKTPQGLTPLQRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEI 461 (591)
Q Consensus 382 ~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 461 (591)
+.+.....+..++.+++.+.+.|+++||. ..++--++.+++.+.. .
T Consensus 72 a~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~-----------~cl~~cily~~scl~k-----------------------~ 117 (354)
T PF05631_consen 72 AILFVAGFASSAIFGTFVGSLADRYGRKK-----------ACLLFCILYSLSCLTK-----------------------H 117 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchH-----------HHHHHHHHHHHHHHHH-----------------------h
Confidence 34455556677888889998888877762 1222222333333221 2
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhh-----hheeecccCCcchhHHHHHHHH-HHHHHHHHHHHHHHHHhhc
Q 007736 462 PLSVFWLVPQFFLVGAGEAFTYIG-----QLDFFLRECPKGMKTMSTGLFL-STLSLGFFVSSLLVSLVHK 526 (591)
Q Consensus 462 ~~~~~~li~~~~l~g~g~~~~~~~-----~~~~~~~~~p~~~rg~~~gl~~-~~~~lg~~lg~~l~~~i~~ 526 (591)
..++..+++.=++.|++..+.+.. ..+.-.+.+|++..+...+... +.+.+-.++++.+..++.+
T Consensus 118 ~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~ 188 (354)
T PF05631_consen 118 SSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLAD 188 (354)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHH
Confidence 345677778888888887776543 2233445567666666666555 3344555555555555543
No 279
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=90.72 E-value=6.9 Score=39.83 Aligned_cols=61 Identities=15% Similarity=0.290 Sum_probs=41.4
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007736 464 SVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLV 524 (591)
Q Consensus 464 ~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i 524 (591)
+++.+.+.++.-|+--+..+...+--+.+..+++.|-.+|+.....-.+|..+++.+.-.+
T Consensus 341 si~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 341 SIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 4444444444445555555566666677888889999999988887778777777665444
No 280
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=87.70 E-value=17 Score=39.98 Aligned_cols=166 Identities=10% Similarity=0.023 Sum_probs=96.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc---CCChHHHHHHHHHHHH-HHHHHHhhhHHHhhhhchhHHHHHHH
Q 007736 30 GWTSAAMILGGEACERLTTLGIAVNLVTYLTGTM---HLGNASAANTVTNFLG-TSFMLCLLGGFIADTFLGRYLTIAIF 105 (591)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~---~~~~~~~~~~~~~~~~-~~~i~~~~~G~laD~~~Grk~~~~~~ 105 (591)
.++.++.+.++.||..+.|..+- -+.+.+ ..++..+..+-....+ +..+...+..+++|++ +|.+++.+.
T Consensus 22 E~~k~~~l~~m~f~i~f~y~~lR-----~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~-s~~~lFy~~ 95 (491)
T PF03219_consen 22 ELKKFLPLALMFFFILFNYTILR-----DLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRL-SREKLFYII 95 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----HhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHH
Confidence 35567777777777655533222 223221 1255566666443333 5567788899999997 999999887
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCc-cccc---chhHH---------HHHHHHHHHHHhccccccc-cccccc
Q 007736 106 ATVQAAGVTILTISTIIPSLRPPKCNLNHGQS-CIQA---SGMQL---------VVLYIALYLTALGTGGLKS-SVSGFG 171 (591)
Q Consensus 106 ~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~---------~~~~~~~~l~g~g~g~~~~-~~~~~~ 171 (591)
...+..-..+.++.. .|. ++.=|+.. ++.. ....+ |...+.-+..-+-.....+ .-+++.
T Consensus 96 ~~~F~~fF~~f~~vl-yP~-----~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fA 169 (491)
T PF03219_consen 96 IIPFLGFFALFAFVL-YPN-----RDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFA 169 (491)
T ss_pred HHHHHHHHHHHHHHH-hhc-----hhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777666666642 231 12222211 0000 00000 1000111111111111112 347888
Q ss_pred cCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhcc
Q 007736 172 SDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQD 213 (591)
Q Consensus 172 ~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~ 213 (591)
.|.++.++ -.|.++++..+.|+|..++..+..++.+
T Consensus 170 N~itt~~e------AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 170 NEITTVEE------AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888 7899999999999999999888887776
No 281
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=85.91 E-value=3.5 Score=41.03 Aligned_cols=140 Identities=14% Similarity=0.101 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHhhhh-chhHHHHHHHHHHHHHHHHHHHHHh-hcCCCCCCCCCCCCCCcccccchhHHH
Q 007736 70 AANTVTNFLGTSFMLCLLGGFIADTF-LGRYLTIAIFATVQAAGVTILTIST-IIPSLRPPKCNLNHGQSCIQASGMQLV 147 (591)
Q Consensus 70 ~~~~~~~~~~~~~i~~~~~G~laD~~-~Grk~~~~~~~~~~~i~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (591)
-|.+.+.+.++..+++-+..++..|- -.-...+.+...+.+....+..+.. ..|+ ..++.
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~------------------kes~~ 345 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPS------------------KESPS 345 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCC------------------cCCch
Confidence 46777777777777777776666552 0122344554444444333332221 1111 02344
Q ss_pred HHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHH
Q 007736 148 VLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACA 227 (591)
Q Consensus 148 ~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~ 227 (591)
.-+++.++.-.+.|.++|....+=++..|++. |++.++++..-.|+-..++-...-.=....+-|..|-++.+.
T Consensus 346 ~s~i~F~~~E~cvGlfwPSimkmRsqyIPEea------rstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~ 419 (454)
T KOG4332|consen 346 ESLIGFCLFEACVGLFWPSIMKMRSQYIPEEA------RSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAF 419 (454)
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHhhCCHHH------HhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHH
Confidence 44677777778889999999999999999998 999999988877765554422110001123566778887766
Q ss_pred HHHHHH
Q 007736 228 IVFGLV 233 (591)
Q Consensus 228 ~~~~~~ 233 (591)
..++.+
T Consensus 420 ~~~a~i 425 (454)
T KOG4332|consen 420 LFVASI 425 (454)
T ss_pred HHHHHH
Confidence 555543
No 282
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=85.68 E-value=1.9 Score=44.50 Aligned_cols=96 Identities=11% Similarity=0.091 Sum_probs=60.9
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCc-
Q 007736 464 SVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPWLADNLNQG- 542 (591)
Q Consensus 464 ~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w~~~~~~~~- 542 (591)
+.|+.-+.++++.....+..+....-+.+....+.-|...|++.+..-+-..+-+ -.+.+..| +.-+....
T Consensus 325 ~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT---~iVvd~~g-----~~L~ir~Q~ 396 (433)
T KOG3810|consen 325 HIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALILQSILT---LIVVDDRG-----LGLDIRTQF 396 (433)
T ss_pred ceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhhe---EEEEcccc-----cCCCcceeE
Confidence 5777788889998888888877766777777778788889988876544444333 33444222 11111111
Q ss_pred -chHHHHHHHHHHHHHHHHHHHHHhh
Q 007736 543 -RLYDFYWLLAILSALNFVIYLAFAR 567 (591)
Q Consensus 543 -~~~~~f~~~~~~~~v~~~~~~~~~~ 567 (591)
-+..+|.+++++.++++.+.+...+
T Consensus 397 ~~Y~~Yf~v~~~i~~~~~~~~~~~~~ 422 (433)
T KOG3810|consen 397 VVYSSYFIVLGVIFLIGFGIEYLMCR 422 (433)
T ss_pred EEEeehHHHHHHHHHHHHHHHHHHhh
Confidence 1234688888888888776555443
No 283
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=83.16 E-value=3.1 Score=45.05 Aligned_cols=57 Identities=16% Similarity=0.146 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhh
Q 007736 145 QLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTV 207 (591)
Q Consensus 145 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i 207 (591)
+.+..++..++.|+..|-..+....+..+..++++ |..+-.+..++..+|-.+|..+
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e------~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHE------REVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 55666777888999999988888888888888877 7777777777777777777654
No 284
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=81.44 E-value=9.4 Score=32.11 Aligned_cols=41 Identities=12% Similarity=0.208 Sum_probs=32.4
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCc
Q 007736 494 CPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVHKVTGDKKPW 534 (591)
Q Consensus 494 ~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~w 534 (591)
..+..++.++++-...-.+++.+-+...||+.+.+-++.+|
T Consensus 35 ~a~s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPw 75 (116)
T COG5336 35 SAESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPW 75 (116)
T ss_pred cchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcH
Confidence 34567788888888888999999999999998766556666
No 285
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=81.00 E-value=54 Score=35.07 Aligned_cols=83 Identities=19% Similarity=0.140 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhheeecccCCcchhH
Q 007736 421 QRIGVGLVLSIFAMVAAALCEIKRLRAARSHGLTNDPTAEIPLSVFWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKT 500 (591)
Q Consensus 421 ~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg 500 (591)
..++++.+...+..+++.+. .+...+-+.-++.|++.+. -...++++...+|+++--
T Consensus 72 pviil~~~~~i~t~~lll~~----------------------~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq 128 (412)
T PF01770_consen 72 PVIILQALSYIITWLLLLFG----------------------TSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQ 128 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHH----------------------CcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHH
Confidence 44666776666666665553 2455555566666666554 355578888999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc
Q 007736 501 MSTGLFLSTLSLGFFVSSLLVSLVHK 526 (591)
Q Consensus 501 ~~~gl~~~~~~lg~~lg~~l~~~i~~ 526 (591)
++.+.......+|.+++..++..+..
T Consensus 129 ~vts~~raa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 129 KVTSYTRAATLVGRFISSLLGQLLVS 154 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888888888887764
No 286
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=78.35 E-value=1.1e+02 Score=33.48 Aligned_cols=70 Identities=9% Similarity=0.062 Sum_probs=50.6
Q ss_pred HHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhhhhhccccccchhHHHHHHHHHH
Q 007736 156 TALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVLVYIQDNLGREWGYGICACAIVF 230 (591)
Q Consensus 156 ~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~~~l~~~~g~~~~f~~~~~~~~~ 230 (591)
.++.........-..+.+.+|+++. |+..+|-++...++...+..++++.+.+.+||.....+.-+..++
T Consensus 276 y~~~~nlve~~~k~~v~~~~p~~~~-----~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 276 YGISINLVEVTWKSKLKAQYPSPNE-----YSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3444455555566777888876553 899999988888888877777778999999999776655444434
No 287
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=73.64 E-value=13 Score=36.08 Aligned_cols=62 Identities=19% Similarity=0.193 Sum_probs=46.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhheeecccCCc-chhHHHHHHHHH-HHHHHHHHHHHHHHHhhc
Q 007736 465 VFWLVPQFFLVGAGEAFTYIGQLDFFLRECPK-GMKTMSTGLFLS-TLSLGFFVSSLLVSLVHK 526 (591)
Q Consensus 465 ~~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~-~~rg~~~gl~~~-~~~lg~~lg~~l~~~i~~ 526 (591)
.+.+++.....+++.+...+....++.+..|+ +.|+...+.... ...++..+++.+.+.+..
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555557888888888888999999987 678888888888 577788888867666653
No 288
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=72.96 E-value=65 Score=32.12 Aligned_cols=54 Identities=11% Similarity=0.124 Sum_probs=31.5
Q ss_pred cchhhhhhHHHHhhchhhhhhhhhhh---cc--ccccchhHHHHHHHHHHHHHHHHhcC
Q 007736 186 MTNFFNWFFFFISIGSLAAVTVLVYI---QD--NLGREWGYGICACAIVFGLVVFLSGT 239 (591)
Q Consensus 186 r~~~~~~~~~~~~ig~~~~p~i~~~l---~~--~~g~~~~f~~~~~~~~~~~~~~~~~~ 239 (591)
|+....+..++.++|+.++-...-.- .+ ...|++.+.+.+++.++-++++...-
T Consensus 4 K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifG 62 (267)
T PF07672_consen 4 KSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFG 62 (267)
T ss_pred cceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 66666666777888888774332111 11 12488887777766655555544443
No 289
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=72.46 E-value=12 Score=31.46 Aligned_cols=40 Identities=15% Similarity=0.120 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHHHH
Q 007736 74 VTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAAGV 113 (591)
Q Consensus 74 ~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 113 (591)
.+.-++++.+.....||+.|||.|.++.-++..++...+.
T Consensus 48 lssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~A 87 (116)
T COG5336 48 LSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGA 87 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 4455677777778889999999999998777655544443
No 290
>PRK03612 spermidine synthase; Provisional
Probab=60.78 E-value=80 Score=35.06 Aligned_cols=53 Identities=15% Similarity=0.111 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007736 472 FFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVH 525 (591)
Q Consensus 472 ~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~ 525 (591)
.++.++-.++..|....+..+.. .+.-|...|-....+.+|+.+|+++.+++.
T Consensus 117 ~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vL 169 (521)
T PRK03612 117 VLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLL 169 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHH
Confidence 34445556666666544443322 222356667777888999999999988876
No 291
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=60.65 E-value=3 Score=42.78 Aligned_cols=56 Identities=16% Similarity=0.349 Sum_probs=3.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 007736 466 FWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLV 521 (591)
Q Consensus 466 ~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~ 521 (591)
++.++.++++|+..+......+.+..+.++++.|..+..+..+...+|-.+|..+.
T Consensus 249 ~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 249 AWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp ------------------HHHH----------------------------------
T ss_pred HHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44466678889988888888888999999999999998888888888888877664
No 292
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=53.36 E-value=3.9 Score=42.01 Aligned_cols=57 Identities=14% Similarity=0.159 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhh
Q 007736 145 QLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTV 207 (591)
Q Consensus 145 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i 207 (591)
+.+..++..++.|+..|-..+....+..+..++++ |..+-.+..++..+|-.+|..+
T Consensus 247 ~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e------~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 247 SDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEE------RELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp --------------------HHHH---------------------------------------
T ss_pred chHHHHHHHHHHHHccchhhhceeeeCCCcCCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 55666777888999999999999999999999888 7777777777777777766543
No 293
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=50.22 E-value=3.9e+02 Score=29.46 Aligned_cols=42 Identities=17% Similarity=0.014 Sum_probs=37.7
Q ss_pred hhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 007736 485 GQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVHK 526 (591)
Q Consensus 485 ~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~ 526 (591)
.-|.++-+....+...+..+++....++|..+++.+..++.+
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457788899999999999999999999999999999988875
No 294
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=47.27 E-value=29 Score=36.87 Aligned_cols=127 Identities=16% Similarity=0.091 Sum_probs=71.8
Q ss_pred HHHHHHhhhhcC--C-ChHHHHHHHHH-HHHHHHHHHhhhHHHhhhhchhHHHHHHHHH-HHHHHHHHHHHHhhcCCCCC
Q 007736 53 VNLVTYLTGTMH--L-GNASAANTVTN-FLGTSFMLCLLGGFIADTFLGRYLTIAIFAT-VQAAGVTILTISTIIPSLRP 127 (591)
Q Consensus 53 ~~l~~yl~~~~~--~-~~~~~~~~~~~-~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~-~~~i~~~l~~~~~~~~~~~~ 127 (591)
+..|.+..+..+ . +..-.-.+... +.+.-.+|.+...++-++ +||......+. ...+-.+.+
T Consensus 264 siFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~i~v~lR~lfiPlF~~----------- 330 (406)
T KOG1479|consen 264 SIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWP--DPRKLTIPVLLRLLFIPLFLL----------- 330 (406)
T ss_pred EecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCC--CCceehHHHHHHHHHHHHHHH-----------
Confidence 355666654432 2 23333444445 777778887777777765 45554433222 222222211
Q ss_pred CCCCCCCCCcccccchhHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhh
Q 007736 128 PKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAA 204 (591)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~ 204 (591)
||+-. .+..-.+.+.+++...++|+..|=..+....+..+..|+++ +..+-.+.......|-..|
T Consensus 331 --cn~~~----~~v~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e------~e~aG~~m~~fl~~Gl~~G 395 (406)
T KOG1479|consen 331 --CNYPP----LPVVFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSE------KEAAGNLMVFFLVGGLALG 395 (406)
T ss_pred --hccCC----CCceecCchHHHHHHHHHHhccchHhhheehhcCCCCChHH------HHHHHHHHHHHHHHHHHHh
Confidence 11100 12222466777788888999999998888899999888887 4444444444444444444
No 295
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=46.76 E-value=94 Score=30.91 Aligned_cols=29 Identities=14% Similarity=-0.001 Sum_probs=15.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007736 496 KGMKTMSTGLFLSTLSLGFFVSSLLVSLV 524 (591)
Q Consensus 496 ~~~rg~~~gl~~~~~~lg~~lg~~l~~~i 524 (591)
+-+|..+.|+.....+..+.+.++..+.+
T Consensus 74 pii~~iGLglg~liW~s~n~l~Gw~~grf 102 (254)
T PF07857_consen 74 PIIKTIGLGLGMLIWGSVNCLTGWASGRF 102 (254)
T ss_pred hHhhhhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 34455555555555555555555555433
No 296
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=46.01 E-value=1e+02 Score=32.74 Aligned_cols=52 Identities=13% Similarity=0.114 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007736 472 FFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSL 523 (591)
Q Consensus 472 ~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~ 523 (591)
+++.-+..+.-....-.....+..++.-|-+..........|.++|..+.-.
T Consensus 140 f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLa 191 (510)
T KOG3574|consen 140 FLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLA 191 (510)
T ss_pred HHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeE
Confidence 3444444444344433444455556666766666666666666666655433
No 297
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=45.53 E-value=2e+02 Score=30.28 Aligned_cols=95 Identities=12% Similarity=0.021 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHHHHH--HHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHH
Q 007736 69 SAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFA--TVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQL 146 (591)
Q Consensus 69 ~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~--~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (591)
-.|..-++..+.++++.+..|++--++ -|..-++++. +..+-..++++.+ .+.
T Consensus 272 yNG~veAv~tlLGa~~~~~~g~l~i~w-~r~g~~ll~~~s~~~agllf~m~~t------------------------~~I 326 (433)
T KOG3810|consen 272 YNGAVEAVSTLLGAIAALAAGYLNINW-NRWGDLLLAVGSAVQAGLLFIMAQT------------------------QHI 326 (433)
T ss_pred hcCHHHHHHHHHHHHHHHHHHheeecc-chhhHHHHHHHHHHhhhhhhhhhcc------------------------cce
Confidence 445566677788999999999997664 5554444333 3333333334332 567
Q ss_pred HHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhH
Q 007736 147 VVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFF 194 (591)
Q Consensus 147 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 194 (591)
+..+++-++...-.....+.+..-+++....+. -+-.+|+..
T Consensus 327 w~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~------~gLvFGiNT 368 (433)
T KOG3810|consen 327 WVCYAGYVLFRVIYQLTITIATFQIARNLSSEL------FGLVFGINT 368 (433)
T ss_pred ehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhh------heeeeehHH
Confidence 777777777776677777777777778777777 788887743
No 298
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=44.06 E-value=29 Score=34.54 Aligned_cols=64 Identities=20% Similarity=0.150 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHh---------hhhchhHHHH
Q 007736 37 ILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIA---------DTFLGRYLTI 102 (591)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~la---------D~~~Grk~~~ 102 (591)
--.+.+.+..+.-...+++..|+++ .++++.+.+.++-+.++.-++..++.|..+ ||+ |||+..
T Consensus 22 yGvGHmlNDitAScWFTYlllfltq-iglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~-G~~~~w 94 (412)
T KOG4830|consen 22 YGVGHMLNDITASCWFTYLLLFLTQ-IGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI-GRRMSW 94 (412)
T ss_pred echhHHHhhHHHHHHHHHHHHHHHH-hcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh-cceeee
Confidence 3456778888888888999999875 688888888888888999999999998654 675 887643
No 299
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=41.30 E-value=1.8e+02 Score=29.12 Aligned_cols=81 Identities=14% Similarity=0.146 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHhhhHHHhhhhchhHHHHH----HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHH
Q 007736 74 VTNFLGTSFMLCLLGGFIADTFLGRYLTIA----IFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVL 149 (591)
Q Consensus 74 ~~~~~~~~~i~~~~~G~laD~~~Grk~~~~----~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (591)
...+..+.+++...-|........||+-+. .++++..++.+..+.. -+ .+......+
T Consensus 147 ~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~--g~-----------------~~~~~~~~f 207 (267)
T PF07672_consen 147 QILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFV--GP-----------------GNAAGFAFF 207 (267)
T ss_pred HHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh--Cc-----------------chHHHHHHH
Confidence 334455566776777777766445666444 2233333333331111 01 111245667
Q ss_pred HHHHHHHHhccccccccccccccC
Q 007736 150 YIALYLTALGTGGLKSSVSGFGSD 173 (591)
Q Consensus 150 ~~~~~l~g~g~g~~~~~~~~~~~~ 173 (591)
++.-++.|+..=+..++..-+-.|
T Consensus 208 ~I~~Fl~G~f~WgiQ~ViL~lPhE 231 (267)
T PF07672_consen 208 YIFGFLAGFFLWGIQGVILNLPHE 231 (267)
T ss_pred HHHHHHHHHHHHhhhHHHhcChhh
Confidence 777778887766666555444444
No 300
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=39.53 E-value=1.1e+02 Score=22.18 Aligned_cols=36 Identities=8% Similarity=0.229 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhhhHHHhhhhchhHHHHHHHHHHHHH
Q 007736 76 NFLGTSFMLCLLGGFIADTFLGRYLTIAIFATVQAA 111 (591)
Q Consensus 76 ~~~~~~~i~~~~~G~laD~~~Grk~~~~~~~~~~~i 111 (591)
.......+.....|+..|+.+|.++...+...+..+
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~ 43 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGI 43 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 344556667778899999987987766655444444
No 301
>PRK10263 DNA translocase FtsK; Provisional
Probab=36.07 E-value=1.1e+02 Score=37.52 Aligned_cols=27 Identities=15% Similarity=-0.006 Sum_probs=15.0
Q ss_pred hchhhhhhhhhhhccccccchhHHHHH
Q 007736 199 IGSLAAVTVLVYIQDNLGREWGYGICA 225 (591)
Q Consensus 199 ig~~~~p~i~~~l~~~~g~~~~f~~~~ 225 (591)
.|+++|..+...+...+|.....++..
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~LILL 168 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGTIALL 168 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHHHHHH
Confidence 466666666666666555444433333
No 302
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=35.52 E-value=2.8e+02 Score=30.56 Aligned_cols=36 Identities=11% Similarity=0.046 Sum_probs=25.9
Q ss_pred ecccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007736 490 FLRECPKGMKTMSTGLFLSTLSLGFFVSSLLVSLVH 525 (591)
Q Consensus 490 ~~~~~p~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~ 525 (591)
...+..++.++-++.........|.+++-.++-.+.
T Consensus 143 ALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlaln 178 (544)
T PF13000_consen 143 ALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALN 178 (544)
T ss_pred hhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhC
Confidence 334555677888888877788888888877766554
No 303
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=30.43 E-value=38 Score=34.74 Aligned_cols=59 Identities=10% Similarity=-0.033 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHHHHhccccccccccccccCCCCCCChhhhhccchhhhhhHHHHhhchhhhhhhh
Q 007736 144 MQLVVLYIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSLAAVTVL 208 (591)
Q Consensus 144 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~i~ 208 (591)
++++.+++..+.-|+-.|..+.+..--+.+..++++ |--+++....+-.+|..++..++
T Consensus 340 psi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~------rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 340 PSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDV------REFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred cHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchH------HHHhHhhheecchhhHHHHHHHh
Confidence 367777777777888888888888888888888888 88888877766666666665443
No 304
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=30.42 E-value=91 Score=28.37 Aligned_cols=31 Identities=19% Similarity=0.284 Sum_probs=22.6
Q ss_pred cccccccCCCCCCChhhhhccchhhhhhHHHHhhchh
Q 007736 166 SVSGFGSDQFDDSDPQERNQMTNFFNWFFFFISIGSL 202 (591)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ 202 (591)
..+.+++-..++++ .|+.+||-.+-.|++-+
T Consensus 114 isYGilSaSWD~~r------~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 114 ISYGILSASWDPER------EGSLLGWEEFKRNWGRM 144 (153)
T ss_pred hhhhhcccccCCCC------CCCcccHHHHHHhHHHH
Confidence 34555666677787 79999998888777644
No 305
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=30.05 E-value=4.8e+02 Score=24.67 Aligned_cols=43 Identities=16% Similarity=0.063 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHhhhHHHhh---hhchhHHHHHHHHHHHHHHHHHHH
Q 007736 74 VTNFLGTSFMLCLLGGFIAD---TFLGRYLTIAIFATVQAAGVTILT 117 (591)
Q Consensus 74 ~~~~~~~~~i~~~~~G~laD---~~~Grk~~~~~~~~~~~i~~~l~~ 117 (591)
.....++..++..+++.+.+ +. .+++.....+.+..+..+...
T Consensus 52 ~~~~i~~F~~G~~~~~~i~~~~~~~-~~~~~~~~~l~~~~~ll~~~~ 97 (209)
T PF06912_consen 52 YLLAILSFILGAFLAGLIVRRSRRR-RRRRWYRILLLLEAILLLIAA 97 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccc-chhHHHHHHHHHHHHHHHHHH
Confidence 34445666677777777732 22 344444444444444443333
No 306
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=29.72 E-value=1.7e+02 Score=26.68 Aligned_cols=48 Identities=10% Similarity=-0.054 Sum_probs=28.9
Q ss_pred hHHHHHHHHHHHHHHHHhhhhheeecccCCcchhHHHHHHHHHHHHHHHHH
Q 007736 466 FWLVPQFFLVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFV 516 (591)
Q Consensus 466 ~~li~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~gl~~~~~~lg~~l 516 (591)
..+...++++++|..... |...+..-.++..|+..|+-.+..+++-..
T Consensus 98 ~~~~~S~~~Fg~gllGis---YGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 98 AVLLVSLVFFGLGLLGIS---YGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHHHHHHHHHHHHHHhhh---hhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 333444455555533322 444555566677899999988888776553
No 307
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=26.01 E-value=2.9e+02 Score=31.93 Aligned_cols=48 Identities=17% Similarity=0.132 Sum_probs=33.2
Q ss_pred hhhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccc
Q 007736 93 DTFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGL 163 (591)
Q Consensus 93 D~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~ 163 (591)
|++.||.+-+.++..+++++.+...+.. ...+.+..+..+.+++.++.
T Consensus 51 ~~~~~R~~~l~it~~~f~i~sl~v~ll~-----------------------~~p~~~~~~l~~~tf~~~ml 98 (701)
T TIGR01667 51 DRLTGRLKNLIITLSCFSIASFLVQLLF-----------------------PKPWLFPFLLTLLTFGFILL 98 (701)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------cchHHHHHHHHHHHHHHHHH
Confidence 4456788899999999988888777653 24555666666666665553
No 308
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=23.46 E-value=5.8e+02 Score=29.55 Aligned_cols=52 Identities=12% Similarity=0.101 Sum_probs=34.6
Q ss_pred HHHhh---hhchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhccccc
Q 007736 89 GFIAD---TFLGRYLTIAIFATVQAAGVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVLYIALYLTALGTGGL 163 (591)
Q Consensus 89 G~laD---~~~Grk~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~ 163 (591)
+-++| ++.||.+-+.++.++++++.+...+.. ...+.+..+..+.+++.++.
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~-----------------------~~p~lf~~~l~~~tf~~~ml 98 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELLF-----------------------GKPWLFAVGLTVSTFGFIML 98 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------cCcHHHHHHHHHHHHHHHHH
Confidence 44454 456888888888888888888776653 24555666666666665553
No 309
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=22.07 E-value=41 Score=33.56 Aligned_cols=148 Identities=9% Similarity=0.013 Sum_probs=87.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHHHHHhhhHHHhhhhchhHHHHH-HHHHHHHH
Q 007736 33 SAAMILGGEACERLTTLGIAVNLVTYLTGTMHLGNASAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIA-IFATVQAA 111 (591)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~laD~~~Grk~~~~-~~~~~~~i 111 (591)
..+.+.+.+++.++..-..+.+++.|..++++++....+++-.+..++++.-+.+..-+-=.- .|+|.+. .|.++...
T Consensus 202 ~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwng-krlKayYsaGgiiwif 280 (412)
T KOG4830|consen 202 QFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNG-KRLKAYYSAGGIIWIF 280 (412)
T ss_pred HHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCc-ceeeeeeecccHHHHH
Confidence 567788888899988888899999999999999888878777666666665555443222111 2445444 33333333
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCcccccchhHHHHH-HHHHHHHHhccccccccccccccCCCCCCChhhhhccchhh
Q 007736 112 GVTILTISTIIPSLRPPKCNLNHGQSCIQASGMQLVVL-YIALYLTALGTGGLKSSVSGFGSDQFDDSDPQERNQMTNFF 190 (591)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 190 (591)
+....-+ .| .....+ ++.-.+.|+..+.......++.++...++.-+ +.-.+
T Consensus 281 cga~ilL---lp--------------------r~i~symyAisvfIGIAnAimlvtslsitavli~~~~~~----~aFv~ 333 (412)
T KOG4830|consen 281 CGAVILL---LP--------------------RGIKSYMYAISVFIGIANAIMLVTSLSITAVLINKNTES----GAFVY 333 (412)
T ss_pred hhhheee---cc--------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC----ceEEE
Confidence 2221111 12 122222 23334567777777666666677766655521 44455
Q ss_pred hhhHHHHhhchhhhhhhh
Q 007736 191 NWFFFFISIGSLAAVTVL 208 (591)
Q Consensus 191 ~~~~~~~~ig~~~~p~i~ 208 (591)
|-.++.--+...++..+.
T Consensus 334 GamSF~DKlS~GiA~~li 351 (412)
T KOG4830|consen 334 GAMSFFDKLSNGIAYQLI 351 (412)
T ss_pred ehHHHHHhhcccHHHHHH
Confidence 555555556666665443
Done!