Query 007740
Match_columns 591
No_of_seqs 464 out of 2748
Neff 7.2
Searched_HMMs 46136
Date Thu Mar 28 14:42:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007740.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007740hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01989 STK_N The N-terminal d 99.9 1.7E-25 3.7E-30 207.2 16.8 143 46-199 1-146 (146)
2 PRK15456 universal stress prot 99.8 2.3E-20 5E-25 172.4 14.8 138 45-197 3-142 (142)
3 PRK15005 universal stress prot 99.8 1.6E-19 3.4E-24 166.7 15.2 138 45-197 3-144 (144)
4 PRK09982 universal stress prot 99.8 1.8E-18 3.8E-23 160.2 14.6 134 45-198 4-139 (142)
5 cd01987 USP_OKCHK USP domain i 99.8 1.8E-18 3.9E-23 155.5 14.2 121 46-196 1-123 (124)
6 PRK15118 universal stress glob 99.8 1.9E-18 4.1E-23 159.8 14.2 134 45-198 4-139 (144)
7 cd01988 Na_H_Antiporter_C The 99.8 7.5E-18 1.6E-22 152.3 14.9 130 46-197 1-132 (132)
8 PRK10116 universal stress prot 99.8 2.1E-17 4.6E-22 152.1 15.9 133 45-197 4-138 (142)
9 PF00582 Usp: Universal stress 99.7 2.1E-17 4.6E-22 148.8 13.9 135 45-196 3-139 (140)
10 PRK11175 universal stress prot 99.7 3.3E-16 7.2E-21 162.8 16.0 142 45-199 4-147 (305)
11 cd00293 USP_Like Usp: Universa 99.6 6.3E-15 1.4E-19 131.3 14.9 128 46-196 1-130 (130)
12 PRK11175 universal stress prot 99.6 3.6E-15 7.8E-20 155.0 13.5 138 44-197 152-299 (305)
13 COG0589 UspA Universal stress 99.6 5.6E-14 1.2E-18 129.6 16.4 144 44-198 5-152 (154)
14 KOG1187 Serine/threonine prote 99.4 7.4E-13 1.6E-17 141.2 8.0 76 514-590 61-137 (361)
15 PRK12652 putative monovalent c 99.3 1.3E-11 2.8E-16 130.5 13.6 101 44-163 5-122 (357)
16 PRK10490 sensor protein KdpD; 98.9 1.7E-08 3.8E-13 119.8 14.4 125 43-199 249-375 (895)
17 COG2205 KdpD Osmosensitive K+ 98.7 1.5E-07 3.3E-12 106.0 15.2 133 40-202 244-378 (890)
18 KOG0192 Tyrosine kinase specif 98.4 3.1E-07 6.7E-12 98.0 5.1 56 534-590 47-105 (362)
19 KOG0595 Serine/threonine-prote 98.3 4.7E-07 1E-11 95.0 4.2 62 528-590 10-75 (429)
20 KOG0593 Predicted protein kina 98.2 1.1E-06 2.5E-11 89.0 3.1 57 533-590 7-67 (396)
21 KOG0193 Serine/threonine prote 98.1 2.5E-06 5.4E-11 93.4 5.0 68 514-590 385-454 (678)
22 cd01984 AANH_like Adenine nucl 98.1 1.3E-05 2.8E-10 67.3 7.7 83 47-195 1-85 (86)
23 cd06624 STKc_ASK Catalytic dom 98.0 3.7E-06 8E-11 84.9 4.2 68 522-590 2-71 (268)
24 KOG0663 Protein kinase PITSLRE 98.0 3.8E-06 8.1E-11 86.3 3.4 61 528-589 76-140 (419)
25 PHA02988 hypothetical protein; 98.0 1E-05 2.3E-10 83.1 6.8 70 515-590 12-84 (283)
26 KOG1094 Discoidin domain recep 98.0 6.3E-06 1.4E-10 89.9 5.2 57 533-590 543-601 (807)
27 KOG0580 Serine/threonine prote 98.0 2.6E-06 5.7E-11 83.9 1.5 62 528-590 22-88 (281)
28 KOG1026 Nerve growth factor re 98.0 1.6E-06 3.6E-11 98.2 -0.1 57 533-590 491-555 (774)
29 KOG0658 Glycogen synthase kina 97.9 7E-06 1.5E-10 85.3 4.0 56 530-590 26-83 (364)
30 KOG0600 Cdc2-related protein k 97.9 8.7E-06 1.9E-10 87.6 3.6 57 533-590 122-182 (560)
31 KOG0196 Tyrosine kinase, EPH ( 97.9 4.5E-06 9.7E-11 93.7 1.4 77 512-589 604-695 (996)
32 KOG0197 Tyrosine kinases [Sign 97.8 1.1E-05 2.5E-10 87.2 3.9 67 515-590 200-267 (468)
33 KOG0597 Serine-threonine prote 97.8 9.3E-06 2E-10 88.3 3.0 61 529-590 3-67 (808)
34 KOG1025 Epidermal growth facto 97.8 3.9E-05 8.4E-10 86.7 7.9 57 533-590 701-764 (1177)
35 KOG4278 Protein tyrosine kinas 97.8 8.8E-06 1.9E-10 89.1 2.4 61 528-590 267-329 (1157)
36 KOG0194 Protein tyrosine kinas 97.8 1.6E-05 3.5E-10 86.9 4.2 57 533-590 162-227 (474)
37 KOG0199 ACK and related non-re 97.8 2.4E-05 5.2E-10 87.0 4.7 56 534-590 116-177 (1039)
38 KOG0659 Cdk activating kinase 97.7 3E-05 6.5E-10 77.7 4.8 57 533-590 7-67 (318)
39 KOG1035 eIF-2alpha kinase GCN2 97.7 1.2E-05 2.5E-10 94.2 1.2 64 526-590 477-543 (1351)
40 KOG4250 TANK binding protein k 97.7 1.5E-05 3.2E-10 89.0 1.8 57 533-590 18-77 (732)
41 cd07877 STKc_p38alpha_MAPK14 C 97.7 4.5E-05 9.7E-10 80.7 5.2 75 515-590 4-82 (345)
42 KOG0615 Serine/threonine prote 97.6 4.5E-05 9.6E-10 80.5 4.5 59 531-590 175-242 (475)
43 KOG0575 Polo-like serine/threo 97.6 5.3E-05 1.1E-09 83.3 5.2 60 530-590 20-84 (592)
44 cd07853 STKc_NLK Catalytic dom 97.6 6.5E-05 1.4E-09 80.3 5.7 61 529-590 1-65 (372)
45 cd05108 PTKc_EGFR Catalytic do 97.6 5.1E-05 1.1E-09 79.0 4.7 61 529-590 8-75 (316)
46 KOG2052 Activin A type IB rece 97.6 3.2E-05 7E-10 82.2 3.0 58 530-590 213-271 (513)
47 KOG1095 Protein tyrosine kinas 97.6 4.5E-05 9.8E-10 89.6 4.5 57 533-590 697-761 (1025)
48 cd05096 PTKc_DDR1 Catalytic do 97.6 7.4E-05 1.6E-09 77.1 5.1 61 529-590 6-85 (304)
49 KOG4236 Serine/threonine prote 97.6 6.6E-05 1.4E-09 81.1 4.7 59 529-589 566-628 (888)
50 PF07714 Pkinase_Tyr: Protein 97.6 4E-05 8.8E-10 77.4 3.0 56 534-590 5-67 (259)
51 cd05039 PTKc_Csk_like Catalyti 97.6 8.2E-05 1.8E-09 74.4 5.2 60 529-590 7-66 (256)
52 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 97.6 7.5E-05 1.6E-09 76.0 4.8 61 529-590 5-71 (284)
53 cd05064 PTKc_EphR_A10 Catalyti 97.6 7.8E-05 1.7E-09 75.4 4.8 61 529-590 6-72 (266)
54 cd07871 STKc_PCTAIRE3 Catalyti 97.6 0.0001 2.3E-09 75.6 5.8 61 529-590 6-69 (288)
55 cd07879 STKc_p38delta_MAPK13 C 97.5 0.00012 2.7E-09 77.2 6.4 71 519-590 2-80 (342)
56 KOG0591 NIMA (never in mitosis 97.5 1.5E-05 3.3E-10 80.3 -0.5 57 533-590 24-84 (375)
57 cd07869 STKc_PFTAIRE1 Catalyti 97.5 0.00012 2.6E-09 75.6 6.0 62 528-590 5-69 (303)
58 KOG3653 Transforming growth fa 97.5 3.6E-05 7.7E-10 82.4 2.0 54 534-590 216-270 (534)
59 PLN00034 mitogen-activated pro 97.5 8.5E-05 1.8E-09 78.8 4.8 56 534-590 80-138 (353)
60 KOG0585 Ca2+/calmodulin-depend 97.5 0.00011 2.5E-09 78.7 5.6 63 527-590 96-174 (576)
61 cd05104 PTKc_Kit Catalytic dom 97.5 7.9E-05 1.7E-09 79.9 4.5 62 528-590 35-105 (375)
62 cd06646 STKc_MAP4K5 Catalytic 97.5 0.00014 3E-09 73.3 5.9 61 529-590 10-72 (267)
63 cd05033 PTKc_EphR Catalytic do 97.5 0.0001 2.2E-09 74.3 4.8 62 528-590 4-71 (266)
64 cd05612 STKc_PRKX_like Catalyt 97.5 8.6E-05 1.9E-09 76.4 4.3 61 529-590 2-67 (291)
65 cd07859 STKc_TDY_MAPK_plant Ca 97.5 0.0001 2.2E-09 77.0 4.9 60 530-590 2-65 (338)
66 PTZ00263 protein kinase A cata 97.5 7.9E-05 1.7E-09 78.3 4.0 61 529-590 19-84 (329)
67 cd05105 PTKc_PDGFR_alpha Catal 97.5 9.7E-05 2.1E-09 80.2 4.8 62 528-590 37-107 (400)
68 cd07848 STKc_CDKL5 Catalytic d 97.5 0.00016 3.4E-09 73.8 5.8 61 529-590 2-66 (287)
69 PRK09188 serine/threonine prot 97.5 0.00012 2.5E-09 78.5 4.9 63 525-588 15-85 (365)
70 cd07872 STKc_PCTAIRE2 Catalyti 97.5 0.00015 3.3E-09 75.1 5.6 61 529-590 7-70 (309)
71 cd05599 STKc_NDR_like Catalyti 97.5 8.2E-05 1.8E-09 79.0 3.6 62 528-590 1-67 (364)
72 cd05107 PTKc_PDGFR_beta Cataly 97.5 0.00013 2.9E-09 79.2 5.3 62 528-590 37-107 (401)
73 cd07860 STKc_CDK2_3 Catalytic 97.5 0.00019 4.2E-09 72.9 6.2 61 529-590 1-65 (284)
74 cd05068 PTKc_Frk_like Catalyti 97.5 0.00014 3E-09 73.1 5.0 61 528-590 6-67 (261)
75 cd05626 STKc_LATS2 Catalytic d 97.4 9.8E-05 2.1E-09 79.3 4.1 61 529-590 2-67 (381)
76 cd05102 PTKc_VEGFR3 Catalytic 97.4 6.9E-05 1.5E-09 78.7 2.9 62 528-590 7-77 (338)
77 cd05631 STKc_GRK4 Catalytic do 97.4 0.00011 2.4E-09 75.3 4.2 60 530-590 2-66 (285)
78 KOG0605 NDR and related serine 97.4 0.0012 2.6E-08 71.9 12.0 64 526-590 139-207 (550)
79 cd08228 STKc_Nek6 Catalytic do 97.4 0.00022 4.7E-09 71.7 6.2 62 528-590 2-68 (267)
80 cd05067 PTKc_Lck_Blk Catalytic 97.4 0.00017 3.7E-09 72.4 5.2 60 529-590 7-67 (260)
81 KOG0662 Cyclin-dependent kinas 97.4 0.00012 2.5E-09 69.5 3.6 60 530-590 4-67 (292)
82 cd05114 PTKc_Tec_Rlk Catalytic 97.4 0.00016 3.5E-09 72.4 4.9 59 530-590 6-65 (256)
83 cd05148 PTKc_Srm_Brk Catalytic 97.4 0.0001 2.2E-09 73.9 3.2 62 528-590 6-68 (261)
84 cd06637 STKc_TNIK Catalytic do 97.4 0.00013 2.8E-09 73.6 4.0 64 525-590 3-69 (272)
85 cd05074 PTKc_Tyro3 Catalytic d 97.4 0.00019 4.1E-09 72.4 5.2 59 531-590 2-67 (273)
86 cd07878 STKc_p38beta_MAPK11 Ca 97.4 0.0002 4.3E-09 75.4 5.5 62 528-590 15-80 (343)
87 cd06650 PKc_MEK1 Catalytic dom 97.4 0.00018 4E-09 75.7 5.1 62 528-590 5-69 (333)
88 cd05072 PTKc_Lyn Catalytic dom 97.4 0.00019 4E-09 72.1 4.9 60 529-590 7-67 (261)
89 cd07856 STKc_Sty1_Hog1 Catalyt 97.4 0.00015 3.3E-09 76.2 4.4 68 522-590 4-75 (328)
90 cd07849 STKc_ERK1_2_like Catal 97.4 0.00018 4E-09 75.5 5.1 63 527-590 4-69 (336)
91 cd07864 STKc_CDK12 Catalytic d 97.4 0.00027 5.9E-09 72.5 6.2 64 526-590 5-72 (302)
92 cd07868 STKc_CDK8 Catalytic do 97.4 0.00028 6.1E-09 73.2 6.3 55 533-590 6-64 (317)
93 cd06649 PKc_MEK2 Catalytic dom 97.4 0.00017 3.7E-09 75.8 4.6 62 528-590 5-69 (331)
94 cd05600 STKc_Sid2p_Dbf2p Catal 97.4 0.00015 3.3E-09 76.0 4.3 61 529-590 2-67 (333)
95 cd05629 STKc_NDR_like_fungal C 97.4 0.00015 3.2E-09 77.6 4.2 61 529-590 2-67 (377)
96 cd05062 PTKc_IGF-1R Catalytic 97.4 0.00015 3.3E-09 73.6 4.0 64 526-590 4-75 (277)
97 cd05605 STKc_GRK4_like Catalyt 97.4 0.00017 3.8E-09 73.8 4.5 60 530-590 2-66 (285)
98 cd05045 PTKc_RET Catalytic dom 97.3 0.00021 4.6E-09 73.1 5.0 60 530-590 2-69 (290)
99 cd05103 PTKc_VEGFR2 Catalytic 97.3 0.0002 4.4E-09 75.7 4.9 61 529-590 8-77 (343)
100 cd06621 PKc_MAPKK_Pek1_like Ca 97.3 0.00022 4.7E-09 73.0 4.9 61 529-590 2-65 (287)
101 cd05050 PTKc_Musk Catalytic do 97.3 0.0002 4.2E-09 73.2 4.4 63 527-590 4-74 (288)
102 cd06619 PKc_MKK5 Catalytic dom 97.3 0.00026 5.6E-09 72.2 5.3 60 530-590 3-65 (279)
103 PTZ00036 glycogen synthase kin 97.3 0.00019 4.2E-09 78.9 4.6 57 528-589 66-124 (440)
104 cd07846 STKc_CDKL2_3 Catalytic 97.3 0.00025 5.5E-09 72.0 5.2 61 529-590 2-66 (286)
105 cd05090 PTKc_Ror1 Catalytic do 97.3 0.00022 4.7E-09 72.7 4.7 60 530-590 7-73 (283)
106 KOG4257 Focal adhesion tyrosin 97.3 0.00018 4E-09 79.3 4.3 60 530-590 391-457 (974)
107 cd05070 PTKc_Fyn_Yrk Catalytic 97.3 0.00028 6.1E-09 70.8 5.5 59 530-590 8-67 (260)
108 cd07854 STKc_MAPK4_6 Catalytic 97.3 0.00025 5.5E-09 74.8 5.3 62 528-590 5-68 (342)
109 cd06615 PKc_MEK Catalytic doma 97.3 0.00024 5.2E-09 73.7 5.1 61 529-590 2-65 (308)
110 cd05034 PTKc_Src_like Catalyti 97.3 0.00032 7E-09 70.2 5.8 61 528-590 6-67 (261)
111 cd05038 PTKc_Jak_rpt2 Catalyti 97.3 0.00027 5.9E-09 71.5 5.3 60 530-590 6-72 (284)
112 cd06651 STKc_MEKK3 Catalytic d 97.3 0.00026 5.7E-09 71.4 5.1 62 528-590 2-70 (266)
113 cd07876 STKc_JNK2 Catalytic do 97.3 0.00022 4.8E-09 75.7 4.8 63 527-590 20-86 (359)
114 cd06652 STKc_MEKK2 Catalytic d 97.3 0.00022 4.8E-09 71.8 4.5 62 528-590 2-70 (265)
115 cd06638 STKc_myosinIIIA Cataly 97.3 0.00014 3.1E-09 74.0 3.1 71 518-590 8-81 (286)
116 cd05035 PTKc_Axl_like Catalyti 97.3 0.00028 6E-09 71.0 5.1 59 531-590 2-67 (273)
117 cd07836 STKc_Pho85 Catalytic d 97.3 0.00034 7.5E-09 71.0 5.9 61 529-590 1-64 (284)
118 cd06611 STKc_SLK_like Catalyti 97.3 0.00014 3E-09 73.9 3.0 61 529-590 6-68 (280)
119 cd08224 STKc_Nek6_Nek7 Catalyt 97.3 0.00036 7.7E-09 70.0 5.9 62 528-590 2-68 (267)
120 cd07873 STKc_PCTAIRE1 Catalyti 97.3 0.00033 7.2E-09 72.2 5.7 61 529-590 7-70 (301)
121 cd05075 PTKc_Axl Catalytic dom 97.3 0.00029 6.3E-09 71.0 5.1 58 532-590 3-66 (272)
122 cd07870 STKc_PFTAIRE2 Catalyti 97.3 0.00028 6.1E-09 72.2 5.1 64 526-590 3-69 (291)
123 KOG0586 Serine/threonine prote 97.3 0.00025 5.5E-09 78.2 4.8 67 523-590 51-121 (596)
124 cd05049 PTKc_Trk Catalytic dom 97.3 0.00022 4.7E-09 72.3 4.1 60 530-590 7-74 (280)
125 cd07867 STKc_CDC2L6 Catalytic 97.3 0.00033 7.2E-09 72.5 5.5 55 533-590 6-64 (317)
126 cd06641 STKc_MST3 Catalytic do 97.3 0.0003 6.4E-09 71.5 5.0 60 530-590 6-68 (277)
127 cd05598 STKc_LATS Catalytic do 97.3 0.00027 5.8E-09 75.6 4.9 61 529-590 2-67 (376)
128 PHA03212 serine/threonine kina 97.3 0.00027 5.9E-09 76.4 4.9 55 529-590 93-149 (391)
129 cd05071 PTKc_Src Catalytic dom 97.3 0.00035 7.5E-09 70.5 5.3 59 530-590 8-67 (262)
130 cd06625 STKc_MEKK3_like Cataly 97.3 0.00043 9.4E-09 69.3 6.0 62 528-590 2-70 (263)
131 cd06656 STKc_PAK3 Catalytic do 97.3 0.00038 8.3E-09 71.8 5.7 61 529-590 20-82 (297)
132 cd05625 STKc_LATS1 Catalytic d 97.3 0.00021 4.5E-09 76.7 3.8 61 529-590 2-67 (382)
133 KOG0577 Serine/threonine prote 97.3 0.0002 4.3E-09 78.5 3.6 59 530-589 28-91 (948)
134 cd05578 STKc_Yank1 Catalytic d 97.2 0.00029 6.2E-09 70.6 4.3 61 529-590 1-66 (258)
135 cd06630 STKc_MEKK1 Catalytic d 97.2 0.00037 8E-09 70.0 5.1 61 529-590 1-69 (268)
136 cd05046 PTK_CCK4 Pseudokinase 97.2 0.00034 7.3E-09 70.8 4.8 62 528-590 5-74 (275)
137 cd08529 STKc_FA2-like Catalyti 97.2 0.00034 7.4E-09 69.6 4.8 61 529-590 1-65 (256)
138 cd05573 STKc_ROCK_NDR_like Cat 97.2 0.00029 6.3E-09 74.2 4.5 61 529-590 2-67 (350)
139 cd05043 PTK_Ryk Pseudokinase d 97.2 0.00035 7.6E-09 70.9 5.0 62 528-590 6-74 (280)
140 cd05063 PTKc_EphR_A2 Catalytic 97.2 0.00028 6.2E-09 71.0 4.2 63 527-590 4-72 (268)
141 cd05106 PTKc_CSF-1R Catalytic 97.2 0.0003 6.6E-09 75.5 4.6 62 528-590 38-108 (374)
142 cd06645 STKc_MAP4K3 Catalytic 97.2 0.00023 5E-09 71.6 3.5 60 530-590 11-72 (267)
143 PRK13184 pknD serine/threonine 97.2 0.00038 8.3E-09 82.1 5.7 61 529-590 3-68 (932)
144 cd07844 STKc_PCTAIRE_like Cata 97.2 0.0004 8.6E-09 71.0 5.2 62 528-590 5-69 (291)
145 cd05052 PTKc_Abl Catalytic dom 97.2 0.00033 7.1E-09 70.5 4.5 59 530-590 8-68 (263)
146 cd06659 STKc_PAK6 Catalytic do 97.2 0.00036 7.8E-09 72.1 4.9 56 534-590 27-84 (297)
147 cd05113 PTKc_Btk_Bmx Catalytic 97.2 0.00037 7.9E-09 70.1 4.8 59 530-590 6-65 (256)
148 cd05632 STKc_GRK5 Catalytic do 97.2 0.00033 7.1E-09 71.7 4.5 60 530-590 2-66 (285)
149 cd07875 STKc_JNK1 Catalytic do 97.2 0.00043 9.4E-09 73.6 5.6 63 527-590 23-89 (364)
150 cd07841 STKc_CDK7 Catalytic do 97.2 0.00047 1E-08 70.7 5.7 60 530-590 2-68 (298)
151 smart00219 TyrKc Tyrosine kina 97.2 0.00049 1.1E-08 68.4 5.6 58 532-590 3-67 (258)
152 cd07874 STKc_JNK3 Catalytic do 97.2 0.00033 7.1E-09 74.2 4.6 64 526-590 15-82 (355)
153 KOG0661 MAPK related serine/th 97.2 0.00016 3.4E-09 77.7 2.0 56 533-590 15-75 (538)
154 cd07861 STKc_CDK1_euk Catalyti 97.2 0.00055 1.2E-08 69.5 6.0 60 530-590 2-65 (285)
155 cd07835 STKc_CDK1_like Catalyt 97.2 0.00058 1.3E-08 69.4 6.2 59 531-590 2-64 (283)
156 cd06609 STKc_MST3_like Catalyt 97.2 0.00045 9.8E-09 69.9 5.3 61 529-590 2-65 (274)
157 cd05596 STKc_ROCK Catalytic do 97.2 0.00019 4.2E-09 76.8 2.7 63 527-590 42-109 (370)
158 cd06632 STKc_MEKK1_plant Catal 97.2 0.00044 9.6E-09 68.8 5.2 60 530-590 2-68 (258)
159 cd05083 PTKc_Chk Catalytic dom 97.2 0.00029 6.4E-09 70.4 3.8 58 530-590 8-65 (254)
160 cd05092 PTKc_TrkA Catalytic do 97.2 0.00043 9.3E-09 70.5 5.1 61 529-590 6-73 (280)
161 cd07847 STKc_CDKL1_4 Catalytic 97.2 0.00059 1.3E-08 69.2 6.1 61 529-590 2-66 (286)
162 cd06613 STKc_MAP4K3_like Catal 97.2 0.00047 1E-08 68.9 5.3 62 528-590 3-66 (262)
163 cd07866 STKc_BUR1 Catalytic do 97.2 0.00046 9.9E-09 71.0 5.2 63 527-590 7-73 (311)
164 cd08225 STKc_Nek5 Catalytic do 97.2 0.00041 8.9E-09 69.1 4.7 61 529-590 1-65 (257)
165 cd06622 PKc_MAPKK_PBS2_like Ca 97.2 0.00033 7.2E-09 71.4 4.1 60 530-590 3-65 (286)
166 cd05621 STKc_ROCK2 Catalytic d 97.2 0.00027 5.8E-09 75.8 3.6 62 528-590 43-109 (370)
167 PTZ00426 cAMP-dependent protei 97.2 0.0003 6.6E-09 74.4 3.9 61 529-590 31-97 (340)
168 cd05056 PTKc_FAK Catalytic dom 97.2 0.00032 7E-09 70.8 3.9 60 530-590 8-73 (270)
169 cd06620 PKc_MAPKK_Byr1_like Ca 97.2 0.00037 7.9E-09 71.1 4.3 59 531-590 8-69 (284)
170 cd05036 PTKc_ALK_LTK Catalytic 97.2 0.00035 7.5E-09 71.0 4.1 64 526-590 4-75 (277)
171 cd08229 STKc_Nek7 Catalytic do 97.2 0.00042 9.2E-09 69.6 4.7 61 529-590 3-68 (267)
172 cd07845 STKc_CDK10 Catalytic d 97.2 0.0005 1.1E-08 71.1 5.4 63 527-590 6-72 (309)
173 cd06647 STKc_PAK_I Catalytic d 97.2 0.00052 1.1E-08 70.6 5.5 62 528-590 19-82 (293)
174 cd05082 PTKc_Csk Catalytic dom 97.2 0.0005 1.1E-08 68.8 5.2 59 529-590 7-65 (256)
175 cd06644 STKc_STK10_LOK Catalyt 97.2 0.00039 8.4E-09 71.2 4.4 60 530-590 14-75 (292)
176 cd07880 STKc_p38gamma_MAPK12 C 97.1 0.00049 1.1E-08 72.7 5.2 63 527-590 14-80 (343)
177 cd06639 STKc_myosinIIIB Cataly 97.1 0.0003 6.5E-09 71.9 3.5 72 517-590 11-85 (291)
178 cd06612 STKc_MST1_2 Catalytic 97.1 0.00051 1.1E-08 68.4 5.0 60 528-590 3-64 (256)
179 cd05112 PTKc_Itk Catalytic dom 97.1 0.00056 1.2E-08 68.3 5.4 59 530-590 6-65 (256)
180 cd05091 PTKc_Ror2 Catalytic do 97.1 0.00034 7.3E-09 71.2 3.8 57 533-590 10-74 (283)
181 cd06653 STKc_MEKK3_like_1 Cata 97.1 0.00049 1.1E-08 69.3 4.9 62 528-590 2-70 (264)
182 KOG0198 MEKK and related serin 97.1 0.00053 1.1E-08 71.7 5.2 60 530-590 19-80 (313)
183 cd06654 STKc_PAK1 Catalytic do 97.1 0.00059 1.3E-08 70.3 5.6 60 530-590 22-83 (296)
184 cd07842 STKc_CDK8_like Catalyt 97.1 0.00068 1.5E-08 69.9 6.0 60 530-590 2-68 (316)
185 cd06610 STKc_OSR1_SPAK Catalyt 97.1 0.00063 1.4E-08 68.1 5.6 61 529-590 2-65 (267)
186 cd07832 STKc_CCRK Catalytic do 97.1 0.00066 1.4E-08 68.9 5.8 60 530-590 2-65 (286)
187 cd05093 PTKc_TrkB Catalytic do 97.1 0.00045 9.8E-09 70.7 4.6 62 528-590 5-73 (288)
188 cd06607 STKc_TAO Catalytic dom 97.1 0.00069 1.5E-08 70.1 6.0 60 530-590 17-81 (307)
189 cd05097 PTKc_DDR_like Catalyti 97.1 0.00042 9E-09 71.2 4.3 61 529-590 6-83 (295)
190 PLN00009 cyclin-dependent kina 97.1 0.00058 1.3E-08 69.9 5.4 62 528-590 2-67 (294)
191 cd06655 STKc_PAK2 Catalytic do 97.1 0.0005 1.1E-08 70.9 4.9 60 530-590 21-82 (296)
192 cd06642 STKc_STK25-YSK1 Cataly 97.1 0.0003 6.5E-09 71.4 3.2 57 533-590 9-68 (277)
193 KOG0201 Serine/threonine prote 97.1 0.00044 9.5E-09 73.7 4.4 59 530-589 15-76 (467)
194 cd06631 STKc_YSK4 Catalytic do 97.1 0.00079 1.7E-08 67.7 6.2 60 530-590 2-68 (265)
195 cd08217 STKc_Nek2 Catalytic do 97.1 0.00054 1.2E-08 68.3 5.0 60 530-590 2-65 (265)
196 cd07840 STKc_CDK9_like Catalyt 97.1 0.00067 1.4E-08 68.7 5.7 58 532-590 3-64 (287)
197 cd06623 PKc_MAPKK_plant_like C 97.1 0.00065 1.4E-08 67.9 5.5 61 529-590 2-65 (264)
198 cd06643 STKc_SLK Catalytic dom 97.1 0.00053 1.1E-08 69.8 4.9 56 534-590 11-68 (282)
199 cd06606 STKc_MAPKKK Catalytic 97.1 0.0006 1.3E-08 67.4 5.2 60 530-590 2-65 (260)
200 cd06626 STKc_MEKK4 Catalytic d 97.1 0.00062 1.3E-08 68.1 5.3 60 530-590 2-65 (264)
201 cd05597 STKc_DMPK_like Catalyt 97.1 0.00045 9.6E-09 72.6 4.4 61 529-590 2-67 (331)
202 cd07852 STKc_MAPK15 Catalytic 97.1 0.00047 1E-08 72.4 4.5 63 527-590 6-73 (337)
203 cd05628 STKc_NDR1 Catalytic do 97.1 0.00044 9.6E-09 73.6 4.3 61 529-590 2-67 (363)
204 cd06616 PKc_MKK4 Catalytic dom 97.1 0.00042 9.2E-09 70.7 4.0 58 532-590 8-69 (288)
205 cd05622 STKc_ROCK1 Catalytic d 97.1 0.00034 7.4E-09 75.0 3.4 68 522-590 37-109 (371)
206 cd06628 STKc_MAPKKK_Byr2_like 97.1 0.00096 2.1E-08 67.0 6.5 60 530-590 2-72 (267)
207 cd07862 STKc_CDK6 Catalytic do 97.1 0.00094 2E-08 68.2 6.4 61 529-590 2-70 (290)
208 cd05110 PTKc_HER4 Catalytic do 97.1 0.00071 1.5E-08 69.9 5.6 61 529-590 8-75 (303)
209 cd05073 PTKc_Hck Catalytic dom 97.1 0.00056 1.2E-08 68.7 4.7 60 529-590 7-67 (260)
210 cd07837 STKc_CdkB_plant Cataly 97.1 0.00075 1.6E-08 69.0 5.7 61 529-590 2-67 (295)
211 cd05601 STKc_CRIK Catalytic do 97.1 0.00049 1.1E-08 72.0 4.4 61 529-590 2-67 (330)
212 cd07843 STKc_CDC2L1 Catalytic 97.1 0.00063 1.4E-08 69.6 5.1 62 528-590 5-70 (293)
213 cd06614 STKc_PAK Catalytic dom 97.1 0.00066 1.4E-08 69.2 5.2 64 525-590 16-81 (286)
214 cd06657 STKc_PAK4 Catalytic do 97.1 0.00071 1.5E-08 69.7 5.4 55 535-590 27-83 (292)
215 KOG0032 Ca2+/calmodulin-depend 97.1 0.00059 1.3E-08 73.6 4.9 61 529-590 36-102 (382)
216 cd07855 STKc_ERK5 Catalytic do 97.1 0.0008 1.7E-08 70.6 5.8 61 528-589 5-69 (334)
217 cd05066 PTKc_EphR_A Catalytic 97.1 0.00055 1.2E-08 69.1 4.4 61 529-590 5-71 (267)
218 cd05048 PTKc_Ror Catalytic Dom 97.1 0.00046 1E-08 70.1 3.8 61 529-590 6-74 (283)
219 PLN00113 leucine-rich repeat r 97.0 0.00089 1.9E-08 80.7 6.8 65 518-590 683-749 (968)
220 cd05111 PTK_HER3 Pseudokinase 97.0 0.00085 1.8E-08 68.4 5.7 60 530-590 9-75 (279)
221 cd07865 STKc_CDK9 Catalytic do 97.0 0.00083 1.8E-08 69.0 5.7 62 528-590 12-77 (310)
222 cd05065 PTKc_EphR_B Catalytic 97.0 0.00043 9.3E-09 69.8 3.4 60 530-590 6-71 (269)
223 cd07858 STKc_TEY_MAPK_plant Ca 97.0 0.00066 1.4E-08 71.4 5.0 62 528-590 5-70 (337)
224 cd07833 STKc_CDKL Catalytic do 97.0 0.00062 1.3E-08 69.1 4.6 61 529-590 2-66 (288)
225 KOG0598 Ribosomal protein S6 k 97.0 0.00038 8.2E-09 72.7 2.9 62 528-590 25-91 (357)
226 cd05059 PTKc_Tec_like Catalyti 97.0 0.00085 1.8E-08 67.2 5.4 59 530-590 6-65 (256)
227 PHA03211 serine/threonine kina 97.0 0.00056 1.2E-08 75.7 4.4 56 528-590 169-226 (461)
228 cd06629 STKc_MAPKKK_Bck1_like 97.0 0.00074 1.6E-08 68.1 5.0 59 531-590 4-74 (272)
229 cd06635 STKc_TAO1 Catalytic do 97.0 0.00069 1.5E-08 70.5 4.9 60 530-590 27-91 (317)
230 cd06605 PKc_MAPKK Catalytic do 97.0 0.00064 1.4E-08 68.1 4.4 61 529-590 2-65 (265)
231 cd05051 PTKc_DDR Catalytic dom 97.0 0.00068 1.5E-08 69.3 4.6 61 529-590 6-85 (296)
232 KOG0583 Serine/threonine prote 97.0 0.00071 1.5E-08 72.8 4.9 63 527-590 16-86 (370)
233 cd08220 STKc_Nek8 Catalytic do 97.0 0.00088 1.9E-08 66.7 5.3 60 530-590 2-65 (256)
234 cd05627 STKc_NDR2 Catalytic do 97.0 0.00063 1.4E-08 72.3 4.5 61 529-590 2-67 (360)
235 cd05630 STKc_GRK6 Catalytic do 97.0 0.00085 1.9E-08 68.7 5.2 60 530-590 2-66 (285)
236 cd05574 STKc_phototropin_like 97.0 0.00093 2E-08 69.3 5.5 61 529-590 2-67 (316)
237 cd06658 STKc_PAK5 Catalytic do 97.0 0.00053 1.2E-08 70.6 3.7 56 534-590 28-85 (292)
238 cd05069 PTKc_Yes Catalytic dom 97.0 0.00091 2E-08 67.2 5.2 59 530-590 8-67 (260)
239 KOG0611 Predicted serine/threo 97.0 0.00025 5.5E-09 74.6 1.2 56 534-590 59-119 (668)
240 cd05580 STKc_PKA Catalytic dom 97.0 0.00072 1.6E-08 69.3 4.5 61 529-590 2-67 (290)
241 cd07839 STKc_CDK5 Catalytic do 97.0 0.00087 1.9E-08 68.1 5.1 60 530-590 2-65 (284)
242 cd05122 PKc_STE Catalytic doma 97.0 0.0012 2.5E-08 65.0 5.7 60 530-590 2-63 (253)
243 cd06627 STKc_Cdc7_like Catalyt 97.0 0.001 2.2E-08 65.9 5.4 60 530-590 2-65 (254)
244 cd05055 PTKc_PDGFR Catalytic d 97.0 0.00069 1.5E-08 70.1 4.2 62 528-590 35-105 (302)
245 cd05079 PTKc_Jak1_rpt2 Catalyt 97.0 0.00096 2.1E-08 68.0 5.2 60 530-590 6-72 (284)
246 PHA03209 serine/threonine kina 97.0 0.00082 1.8E-08 71.5 4.8 56 528-590 66-123 (357)
247 cd05109 PTKc_HER2 Catalytic do 97.0 0.00075 1.6E-08 68.6 4.3 61 529-590 8-75 (279)
248 cd06636 STKc_MAP4K4_6 Catalyti 97.0 0.00082 1.8E-08 68.3 4.6 71 518-590 6-79 (282)
249 KOG0594 Protein kinase PCTAIRE 96.9 0.00052 1.1E-08 71.3 3.0 56 534-590 17-77 (323)
250 PLN03224 probable serine/threo 96.9 0.00052 1.1E-08 76.6 3.3 60 526-586 143-234 (507)
251 cd05061 PTKc_InsR Catalytic do 96.9 0.0008 1.7E-08 68.8 4.5 63 527-590 5-75 (288)
252 cd05095 PTKc_DDR2 Catalytic do 96.9 0.00072 1.6E-08 69.5 4.1 62 528-590 5-85 (296)
253 cd06640 STKc_MST4 Catalytic do 96.9 0.0009 1.9E-08 68.0 4.7 60 530-590 6-68 (277)
254 cd05080 PTKc_Tyk2_rpt2 Catalyt 96.9 0.0011 2.4E-08 67.4 5.4 59 531-590 7-72 (283)
255 cd06608 STKc_myosinIII_like Ca 96.9 0.00083 1.8E-08 67.4 4.3 64 525-590 3-69 (275)
256 KOG0581 Mitogen-activated prot 96.9 0.0015 3.3E-08 68.3 6.2 66 517-590 75-143 (364)
257 cd06617 PKc_MKK3_6 Catalytic d 96.9 0.0011 2.3E-08 67.3 5.2 62 529-590 2-66 (283)
258 cd05032 PTKc_InsR_like Catalyt 96.9 0.00071 1.5E-08 68.4 3.8 61 529-590 7-75 (277)
259 cd07863 STKc_CDK4 Catalytic do 96.9 0.0012 2.7E-08 67.1 5.6 60 530-590 2-68 (288)
260 cd05057 PTKc_EGFR_like Catalyt 96.9 0.00085 1.8E-08 68.1 4.3 60 530-590 9-75 (279)
261 cd05609 STKc_MAST Catalytic do 96.9 0.00089 1.9E-08 69.2 4.5 61 529-590 2-67 (305)
262 cd07850 STKc_JNK Catalytic dom 96.9 0.0011 2.5E-08 70.1 5.3 63 527-590 15-81 (353)
263 KOG0582 Ste20-like serine/thre 96.9 0.00087 1.9E-08 71.6 4.2 59 530-589 28-89 (516)
264 cd05088 PTKc_Tie2 Catalytic do 96.9 0.0009 1.9E-08 69.2 4.3 62 528-590 7-74 (303)
265 PTZ00024 cyclin-dependent prot 96.9 0.0014 3E-08 68.7 5.8 57 533-590 14-86 (335)
266 cd07834 STKc_MAPK Catalytic do 96.9 0.0013 2.8E-08 68.7 5.4 60 530-590 2-65 (330)
267 cd05094 PTKc_TrkC Catalytic do 96.9 0.00077 1.7E-08 69.1 3.7 61 529-590 6-73 (291)
268 cd05054 PTKc_VEGFR Catalytic d 96.9 0.00073 1.6E-08 71.4 3.6 60 530-590 9-77 (337)
269 cd08218 STKc_Nek1 Catalytic do 96.9 0.0012 2.5E-08 66.0 4.8 60 530-590 2-65 (256)
270 cd05624 STKc_MRCK_beta Catalyt 96.9 0.00085 1.8E-08 70.5 4.0 61 529-590 2-67 (331)
271 cd06648 STKc_PAK_II Catalytic 96.9 0.0013 2.8E-08 67.3 5.2 57 533-590 24-82 (285)
272 KOG0660 Mitogen-activated prot 96.8 0.00082 1.8E-08 70.0 3.5 63 527-590 21-87 (359)
273 cd06917 STKc_NAK1_like Catalyt 96.8 0.0014 2.9E-08 66.4 5.1 60 530-590 3-68 (277)
274 cd08227 PK_STRAD_alpha Pseudok 96.8 0.0014 3E-08 68.6 5.3 56 534-590 4-65 (327)
275 cd06633 STKc_TAO3 Catalytic do 96.8 0.0014 3E-08 68.2 5.2 60 530-590 23-87 (313)
276 PTZ00283 serine/threonine prot 96.8 0.00072 1.6E-08 75.5 3.2 67 522-589 26-96 (496)
277 cd05089 PTKc_Tie1 Catalytic do 96.8 0.0012 2.5E-08 68.0 4.5 61 529-590 3-69 (297)
278 KOG1989 ARK protein kinase fam 96.8 0.00092 2E-08 76.5 3.9 59 531-590 40-101 (738)
279 cd08215 STKc_Nek Catalytic dom 96.8 0.0017 3.6E-08 64.3 5.4 60 530-590 2-65 (258)
280 TIGR02432 lysidine_TilS_N tRNA 96.8 0.019 4.2E-07 55.4 12.5 98 46-171 1-116 (189)
281 cd05581 STKc_PDK1 Catalytic do 96.8 0.0013 2.9E-08 66.2 4.6 61 529-590 2-68 (280)
282 cd08219 STKc_Nek3 Catalytic do 96.8 0.0016 3.5E-08 65.0 5.1 60 530-590 2-64 (255)
283 cd08221 STKc_Nek9 Catalytic do 96.8 0.0016 3.6E-08 64.9 5.1 60 530-590 2-65 (256)
284 cd05610 STKc_MASTL Catalytic d 96.8 0.0014 3E-08 76.1 5.1 62 528-590 4-70 (669)
285 cd05623 STKc_MRCK_alpha Cataly 96.8 0.0011 2.4E-08 69.6 4.0 61 529-590 2-67 (332)
286 PTZ00266 NIMA-related protein 96.7 0.0015 3.2E-08 77.7 5.1 63 527-590 12-78 (1021)
287 cd05053 PTKc_FGFR Catalytic do 96.7 0.0009 2E-08 68.4 2.9 62 528-590 12-82 (293)
288 cd07830 STKc_MAK_like Catalyti 96.7 0.0019 4.1E-08 65.5 5.3 59 531-590 2-64 (283)
289 cd05589 STKc_PKN Catalytic dom 96.7 0.0014 3E-08 68.6 4.2 58 532-590 3-68 (324)
290 cd07851 STKc_p38 Catalytic dom 96.7 0.0013 2.8E-08 69.4 3.8 63 527-590 14-80 (343)
291 smart00221 STYKc Protein kinas 96.7 0.0025 5.4E-08 61.7 5.5 59 531-590 2-63 (225)
292 cd05098 PTKc_FGFR1 Catalytic d 96.7 0.0013 2.8E-08 68.0 3.8 61 529-590 19-90 (307)
293 PHA03207 serine/threonine kina 96.7 0.0018 3.8E-08 70.0 4.8 56 529-590 93-152 (392)
294 KOG1151 Tousled-like protein k 96.7 0.066 1.4E-06 57.5 15.9 57 533-590 468-533 (775)
295 cd07829 STKc_CDK_like Catalyti 96.6 0.0025 5.5E-08 64.3 5.3 58 532-590 3-64 (282)
296 KOG4721 Serine/threonine prote 96.6 0.0012 2.7E-08 72.2 3.1 61 515-590 118-178 (904)
297 cd05101 PTKc_FGFR2 Catalytic d 96.6 0.0016 3.4E-08 67.3 3.8 61 529-590 16-87 (304)
298 cd08528 STKc_Nek10 Catalytic d 96.6 0.0027 5.8E-08 64.0 5.2 61 530-590 2-75 (269)
299 cd08223 STKc_Nek4 Catalytic do 96.6 0.0025 5.4E-08 63.5 4.9 60 530-590 2-65 (257)
300 PF00069 Pkinase: Protein kina 96.6 0.0012 2.6E-08 65.8 2.4 57 533-590 4-64 (260)
301 cd07857 STKc_MPK1 Catalytic do 96.6 0.0028 6E-08 66.5 5.2 60 530-590 2-68 (332)
302 PTZ00267 NIMA-related protein 96.5 0.0017 3.7E-08 72.1 3.5 60 530-590 69-131 (478)
303 cd08530 STKc_CNK2-like Catalyt 96.5 0.0028 6.1E-08 62.9 4.8 60 530-590 2-65 (256)
304 cd06634 STKc_TAO2 Catalytic do 96.5 0.0023 5E-08 66.3 4.2 60 530-590 17-81 (308)
305 cd05118 STKc_CMGC Catalytic do 96.5 0.0037 7.9E-08 63.2 5.4 57 533-590 4-64 (283)
306 cd07831 STKc_MOK Catalytic dom 96.5 0.004 8.6E-08 63.0 5.7 57 533-590 4-64 (282)
307 KOG1029 Endocytic adaptor prot 96.5 0.22 4.8E-06 56.5 19.3 41 449-489 442-482 (1118)
308 cd06618 PKc_MKK7 Catalytic dom 96.5 0.0034 7.3E-08 64.5 5.0 61 529-590 16-80 (296)
309 PF09726 Macoilin: Transmembra 96.4 0.38 8.1E-06 55.9 21.8 57 365-421 458-514 (697)
310 PRK10345 hypothetical protein; 96.4 0.0033 7.1E-08 62.3 4.5 59 530-590 4-67 (210)
311 cd05099 PTKc_FGFR4 Catalytic d 96.4 0.0028 6E-08 65.9 3.9 61 529-590 13-84 (314)
312 cd05614 STKc_MSK2_N N-terminal 96.4 0.0033 7.1E-08 65.8 4.5 60 530-590 2-71 (332)
313 PTZ00284 protein kinase; Provi 96.4 0.002 4.3E-08 71.2 2.8 66 518-585 119-186 (467)
314 PF09726 Macoilin: Transmembra 96.4 0.33 7.1E-06 56.4 20.7 16 362-377 420-435 (697)
315 cd05613 STKc_MSK1_N N-terminal 96.4 0.0039 8.5E-08 63.6 4.7 60 530-590 2-71 (290)
316 cd05587 STKc_cPKC Catalytic do 96.3 0.0035 7.6E-08 65.5 4.3 60 529-589 1-66 (324)
317 cd05616 STKc_cPKC_beta Catalyt 96.3 0.004 8.7E-08 65.1 4.5 60 529-589 1-66 (323)
318 cd08226 PK_STRAD_beta Pseudoki 96.3 0.0059 1.3E-07 63.9 5.8 55 535-590 5-65 (328)
319 cd05100 PTKc_FGFR3 Catalytic d 96.3 0.0034 7.4E-08 65.8 3.8 60 530-590 14-84 (334)
320 PHA03210 serine/threonine kina 96.2 0.0017 3.7E-08 72.6 1.5 63 527-590 147-229 (501)
321 cd07838 STKc_CDK4_6_like Catal 96.2 0.0052 1.1E-07 62.2 4.8 59 531-590 2-67 (287)
322 KOG4717 Serine/threonine prote 96.2 0.002 4.4E-08 69.9 1.8 60 530-590 20-83 (864)
323 cd05615 STKc_cPKC_alpha Cataly 96.2 0.0043 9.3E-08 64.9 4.1 60 529-589 1-66 (323)
324 PRK11637 AmiB activator; Provi 96.2 1.5 3.3E-05 48.2 23.9 21 357-377 44-64 (428)
325 KOG0579 Ste20-like serine/thre 96.1 0.00079 1.7E-08 74.4 -1.8 55 535-590 39-95 (1187)
326 KOG0578 p21-activated serine/t 96.1 0.0048 1E-07 67.8 3.7 56 534-590 279-336 (550)
327 cd08222 STKc_Nek11 Catalytic d 96.1 0.0066 1.4E-07 60.7 4.6 60 530-590 2-68 (260)
328 cd05583 STKc_MSK_N N-terminal 95.9 0.0065 1.4E-07 61.9 3.9 60 530-590 2-71 (288)
329 cd08216 PK_STRAD Pseudokinase 95.9 0.0084 1.8E-07 62.0 4.6 55 535-590 9-65 (314)
330 cd01992 PP-ATPase N-terminal d 95.9 0.1 2.2E-06 50.0 11.7 97 46-170 1-112 (185)
331 cd05147 RIO1_euk RIO kinase fa 95.8 0.0064 1.4E-07 59.1 3.1 29 534-562 3-32 (190)
332 PF00261 Tropomyosin: Tropomyo 95.8 0.51 1.1E-05 47.6 16.9 48 430-477 113-160 (237)
333 KOG0574 STE20-like serine/thre 95.8 0.0014 3.1E-08 66.7 -1.6 58 530-590 35-94 (502)
334 PRK09039 hypothetical protein; 95.7 1.7 3.7E-05 46.3 21.0 89 396-484 96-184 (343)
335 KOG0668 Casein kinase II, alph 95.6 0.0031 6.8E-08 62.2 0.1 59 528-590 38-99 (338)
336 KOG0666 Cyclin C-dependent kin 95.6 0.0048 1E-07 63.4 1.4 60 530-590 26-93 (438)
337 KOG0200 Fibroblast/platelet-de 95.6 0.011 2.3E-07 67.9 4.4 58 532-590 300-368 (609)
338 PLN03159 cation/H(+) antiporte 95.5 0.059 1.3E-06 64.0 10.1 150 41-199 455-617 (832)
339 KOG0994 Extracellular matrix g 95.5 1 2.2E-05 53.5 19.1 20 384-403 1608-1627(1758)
340 PRK09039 hypothetical protein; 95.5 3.9 8.5E-05 43.6 22.8 64 414-477 121-184 (343)
341 TIGR02169 SMC_prok_A chromosom 95.4 2.4 5.1E-05 52.3 24.0 21 46-66 26-47 (1164)
342 KOG0607 MAP kinase-interacting 95.4 0.01 2.3E-07 61.2 2.7 67 519-590 74-142 (463)
343 KOG1006 Mitogen-activated prot 95.4 0.013 2.9E-07 59.1 3.4 73 511-590 54-129 (361)
344 PF01171 ATP_bind_3: PP-loop f 95.3 0.12 2.7E-06 49.6 9.9 96 46-169 1-111 (182)
345 PRK00106 hypothetical protein; 95.3 2.6 5.7E-05 47.4 21.4 18 362-379 48-65 (535)
346 PRK12704 phosphodiesterase; Pr 95.3 2.7 5.9E-05 47.3 21.7 20 360-379 31-50 (520)
347 PF04111 APG6: Autophagy prote 95.3 0.69 1.5E-05 48.7 16.0 34 430-463 57-90 (314)
348 KOG0694 Serine/threonine prote 95.2 0.02 4.4E-07 64.3 4.5 64 526-590 366-435 (694)
349 COG4372 Uncharacterized protei 95.2 5.3 0.00012 42.4 22.7 11 518-528 349-359 (499)
350 KOG4645 MAPKKK (MAP kinase kin 95.2 0.033 7.2E-07 66.8 6.3 67 524-591 1231-1301(1509)
351 KOG0584 Serine/threonine prote 95.1 0.0066 1.4E-07 67.5 0.4 55 535-590 47-107 (632)
352 KOG1029 Endocytic adaptor prot 95.0 1.5 3.2E-05 50.2 18.2 17 446-462 446-462 (1118)
353 PRK10359 lipopolysaccharide co 95.0 0.019 4.2E-07 57.6 3.4 62 527-589 30-100 (232)
354 KOG0980 Actin-binding protein 95.0 4.7 0.0001 47.0 22.3 20 364-383 383-402 (980)
355 PF07926 TPR_MLP1_2: TPR/MLP1/ 94.9 2.9 6.3E-05 38.2 18.5 82 361-442 4-85 (132)
356 KOG4279 Serine/threonine prote 94.9 0.015 3.2E-07 65.5 2.5 56 534-590 581-638 (1226)
357 TIGR02168 SMC_prok_B chromosom 94.9 3.9 8.4E-05 50.3 23.8 21 447-467 883-903 (1179)
358 KOG0592 3-phosphoinositide-dep 94.9 0.013 2.8E-07 64.4 1.8 61 529-590 74-140 (604)
359 PF07888 CALCOCO1: Calcium bin 94.9 5.7 0.00012 44.6 22.2 78 422-499 370-451 (546)
360 KOG1152 Signal transduction se 94.9 0.018 3.9E-07 63.6 2.9 61 529-590 562-635 (772)
361 TIGR03319 YmdA_YtgF conserved 94.8 4.2 9.1E-05 45.8 21.7 20 360-379 25-44 (514)
362 KOG0589 Serine/threonine prote 94.8 0.019 4.1E-07 62.3 3.0 58 531-589 7-68 (426)
363 PRK09605 bifunctional UGMP fam 94.8 0.031 6.6E-07 63.2 4.7 69 520-589 325-401 (535)
364 cd05145 RIO1_like RIO kinase f 94.7 0.037 7.9E-07 53.5 4.3 53 534-587 3-82 (190)
365 PHA02882 putative serine/threo 94.6 0.049 1.1E-06 56.0 5.4 61 529-590 13-89 (294)
366 KOG2345 Serine/threonine prote 94.6 0.015 3.3E-07 58.2 1.3 60 530-590 23-84 (302)
367 PRK12704 phosphodiesterase; Pr 94.4 5.3 0.00011 45.1 21.1 8 533-540 223-230 (520)
368 TIGR03319 YmdA_YtgF conserved 94.4 4.6 0.0001 45.4 20.6 8 533-540 217-224 (514)
369 PRK04863 mukB cell division pr 94.4 4.2 9.2E-05 51.3 22.0 17 515-531 432-448 (1486)
370 PF00261 Tropomyosin: Tropomyo 94.3 6.7 0.00015 39.5 21.8 88 381-468 92-179 (237)
371 PF12718 Tropomyosin_1: Tropom 94.3 4.6 9.9E-05 37.5 20.5 46 444-489 80-125 (143)
372 COG4026 Uncharacterized protei 94.2 1.8 3.8E-05 42.5 14.4 24 515-538 210-233 (290)
373 COG1579 Zn-ribbon protein, pos 94.2 7.1 0.00015 39.3 21.5 55 432-486 91-145 (239)
374 KOG0576 Mitogen-activated prot 94.2 0.0098 2.1E-07 66.6 -1.1 63 527-590 14-78 (829)
375 KOG2891 Surface glycoprotein [ 94.0 7.7 0.00017 39.4 19.2 24 364-387 282-305 (445)
376 PRK00106 hypothetical protein; 94.0 6.2 0.00014 44.5 20.5 7 534-540 239-245 (535)
377 PRK02224 chromosome segregatio 94.0 7.9 0.00017 46.5 23.0 7 63-69 116-122 (880)
378 KOG0616 cAMP-dependent protein 93.9 0.031 6.8E-07 57.3 2.1 60 530-590 46-110 (355)
379 KOG0669 Cyclin T-dependent kin 93.7 0.0046 9.9E-08 61.9 -4.2 56 534-590 23-82 (376)
380 KOG0033 Ca2+/calmodulin-depend 93.7 0.0024 5.2E-08 63.6 -6.1 56 534-590 17-76 (355)
381 KOG0243 Kinesin-like protein [ 93.6 9.6 0.00021 45.7 21.7 18 362-379 406-423 (1041)
382 COG4372 Uncharacterized protei 93.4 13 0.00028 39.7 22.5 17 361-377 75-91 (499)
383 PF08317 Spc7: Spc7 kinetochor 93.4 12 0.00027 39.5 22.8 7 518-524 273-279 (325)
384 KOG0610 Putative serine/threon 93.3 0.051 1.1E-06 58.0 2.5 56 534-590 83-143 (459)
385 PF07888 CALCOCO1: Calcium bin 93.2 17 0.00038 40.8 22.9 8 361-368 144-151 (546)
386 KOG0250 DNA repair protein RAD 93.2 17 0.00036 43.8 22.6 18 157-174 113-130 (1074)
387 COG1196 Smc Chromosome segrega 93.2 13 0.00028 46.3 23.4 9 536-544 1029-1037(1163)
388 cd01993 Alpha_ANH_like_II This 93.1 0.68 1.5E-05 44.1 9.8 96 46-169 1-121 (185)
389 KOG0667 Dual-specificity tyros 93.1 0.079 1.7E-06 59.4 3.6 49 532-582 190-240 (586)
390 KOG1027 Serine/threonine prote 93.0 0.042 9.1E-07 63.1 1.5 58 530-590 511-569 (903)
391 cd05144 RIO2_C RIO kinase fami 93.0 0.13 2.8E-06 49.9 4.7 56 530-586 17-95 (198)
392 KOG0933 Structural maintenance 92.9 16 0.00036 43.4 21.7 17 410-426 788-804 (1174)
393 KOG0250 DNA repair protein RAD 92.9 16 0.00034 44.0 21.9 10 521-530 482-491 (1074)
394 PF00769 ERM: Ezrin/radixin/mo 92.8 11 0.00024 38.3 18.4 35 444-478 75-109 (246)
395 KOG0980 Actin-binding protein 92.6 26 0.00057 41.2 22.7 20 426-445 434-453 (980)
396 KOG0161 Myosin class II heavy 92.5 17 0.00037 46.8 23.0 57 111-171 475-545 (1930)
397 PRK10696 tRNA 2-thiocytidine b 92.5 1.5 3.2E-05 44.8 11.8 95 44-169 29-146 (258)
398 KOG0587 Traf2- and Nck-interac 92.4 0.13 2.8E-06 59.6 4.2 70 520-590 11-82 (953)
399 KOG0994 Extracellular matrix g 92.3 24 0.00051 42.7 21.8 39 361-399 1416-1454(1758)
400 PF10146 zf-C4H2: Zinc finger- 92.3 7.1 0.00015 39.2 16.0 56 416-471 32-87 (230)
401 KOG0664 Nemo-like MAPK-related 92.2 0.053 1.1E-06 55.0 0.8 61 529-590 54-118 (449)
402 cd05119 RIO RIO kinase family, 92.2 0.2 4.3E-06 47.7 4.8 29 534-562 3-32 (187)
403 COG4942 Membrane-bound metallo 92.2 20 0.00044 39.0 24.0 17 362-378 68-84 (420)
404 COG4942 Membrane-bound metallo 92.1 21 0.00045 38.9 23.1 40 360-399 38-77 (420)
405 KOG0588 Serine/threonine prote 92.0 0.11 2.3E-06 58.7 2.9 59 531-590 15-78 (786)
406 PHA03390 pk1 serine/threonine- 91.9 0.3 6.4E-06 49.4 6.0 64 522-590 8-75 (267)
407 PF10481 CENP-F_N: Cenp-F N-te 91.6 10 0.00022 38.6 15.9 103 357-487 15-124 (307)
408 PRK04863 mukB cell division pr 91.6 14 0.00031 46.8 20.8 124 357-483 985-1113(1486)
409 KOG0161 Myosin class II heavy 91.6 30 0.00065 44.7 23.5 12 185-196 656-667 (1930)
410 PF00769 ERM: Ezrin/radixin/mo 91.4 18 0.00039 36.7 18.5 13 388-400 26-38 (246)
411 COG0037 MesJ tRNA(Ile)-lysidin 91.4 1.6 3.5E-05 45.1 10.9 99 44-170 21-136 (298)
412 TIGR00268 conserved hypothetic 91.3 1.5 3.2E-05 44.6 10.1 91 44-166 12-119 (252)
413 smart00787 Spc7 Spc7 kinetocho 91.2 22 0.00048 37.4 19.1 8 517-524 267-274 (312)
414 KOG0690 Serine/threonine prote 91.1 0.094 2E-06 54.4 1.2 61 528-589 168-233 (516)
415 PRK02224 chromosome segregatio 91.0 32 0.0007 41.3 22.9 21 46-66 26-47 (880)
416 PRK03918 chromosome segregatio 91.0 36 0.00079 40.8 23.3 7 158-164 27-33 (880)
417 KOG0996 Structural maintenance 90.9 29 0.00063 42.1 21.0 11 201-211 185-195 (1293)
418 PF12718 Tropomyosin_1: Tropom 90.9 13 0.00029 34.4 17.5 27 456-482 78-104 (143)
419 PRK12342 hypothetical protein; 90.8 1.4 3E-05 45.0 9.3 117 56-207 35-159 (254)
420 cd05120 APH_ChoK_like Aminogly 90.7 0.32 7E-06 43.3 4.3 52 534-588 4-57 (155)
421 KOG1003 Actin filament-coating 90.4 18 0.00039 35.1 21.0 133 357-489 8-140 (205)
422 PF10481 CENP-F_N: Cenp-F N-te 90.3 19 0.00042 36.6 16.4 108 392-499 15-129 (307)
423 KOG0996 Structural maintenance 90.3 35 0.00075 41.5 20.9 7 190-196 159-165 (1293)
424 smart00090 RIO RIO-like kinase 90.2 0.24 5.2E-06 49.9 3.2 55 530-585 30-111 (237)
425 PF09304 Cortex-I_coil: Cortex 90.1 12 0.00027 32.7 14.4 65 414-485 21-85 (107)
426 KOG0964 Structural maintenance 90.1 38 0.00082 40.4 20.6 79 356-434 254-346 (1200)
427 TIGR02680 conserved hypothetic 90.0 42 0.00091 42.5 23.1 11 44-54 25-35 (1353)
428 PRK10884 SH3 domain-containing 89.9 6.6 0.00014 38.8 12.9 23 462-484 136-158 (206)
429 KOG0977 Nuclear envelope prote 89.8 33 0.00071 38.7 19.5 94 364-457 110-210 (546)
430 PF04849 HAP1_N: HAP1 N-termin 89.6 29 0.00063 36.3 20.0 23 356-378 163-185 (306)
431 PLN03225 Serine/threonine-prot 89.6 0.25 5.5E-06 56.2 3.2 36 526-561 130-171 (566)
432 TIGR02680 conserved hypothetic 89.5 59 0.0013 41.2 23.9 20 384-403 871-890 (1353)
433 KOG0933 Structural maintenance 89.4 45 0.00097 40.0 20.6 18 362-379 743-760 (1174)
434 KOG0964 Structural maintenance 89.3 26 0.00056 41.7 18.6 135 358-492 326-473 (1200)
435 KOG4364 Chromatin assembly fac 89.1 47 0.001 38.0 20.5 23 356-378 246-268 (811)
436 KOG0977 Nuclear envelope prote 89.0 33 0.00071 38.7 18.8 33 422-454 154-186 (546)
437 PF05262 Borrelia_P83: Borreli 89.0 19 0.0004 40.2 16.8 11 73-83 50-60 (489)
438 KOG0986 G protein-coupled rece 88.9 0.081 1.8E-06 57.2 -1.3 61 528-589 185-250 (591)
439 PRK13820 argininosuccinate syn 88.9 4.3 9.3E-05 44.1 11.7 90 45-165 3-120 (394)
440 PF15290 Syntaphilin: Golgi-lo 88.8 24 0.00053 36.0 16.0 69 361-429 62-130 (305)
441 PF04949 Transcrip_act: Transc 88.4 21 0.00045 33.1 18.8 64 422-485 83-146 (159)
442 KOG4360 Uncharacterized coiled 88.3 26 0.00056 38.8 16.8 127 352-478 158-302 (596)
443 PRK03359 putative electron tra 88.1 2.8 6E-05 42.9 9.2 121 56-207 36-163 (256)
444 PRK04778 septation ring format 88.1 32 0.0007 39.3 18.8 57 389-445 283-339 (569)
445 cd01990 Alpha_ANH_like_I This 88.1 3.4 7.4E-05 40.2 9.6 89 47-166 1-107 (202)
446 PF11932 DUF3450: Protein of u 87.8 33 0.00072 34.7 18.1 22 539-560 165-188 (251)
447 PF10174 Cast: RIM-binding pro 87.4 58 0.0013 38.6 20.4 79 364-442 368-455 (775)
448 KOG0804 Cytoplasmic Zn-finger 87.3 32 0.0007 37.5 16.6 119 356-479 338-456 (493)
449 PF05262 Borrelia_P83: Borreli 87.2 46 0.001 37.2 18.5 14 152-165 64-77 (489)
450 COG1842 PspA Phage shock prote 86.9 36 0.00078 34.1 18.6 45 357-401 28-72 (225)
451 COG0515 SPS1 Serine/threonine 86.7 0.97 2.1E-05 44.8 5.0 57 532-590 4-64 (384)
452 PF04111 APG6: Autophagy prote 86.7 14 0.00031 38.9 13.8 72 423-501 64-135 (314)
453 PF12128 DUF3584: Protein of u 86.6 79 0.0017 39.7 22.3 13 357-369 604-616 (1201)
454 KOG1024 Receptor-like protein 86.4 0.18 3.8E-06 53.8 -0.6 62 527-589 283-352 (563)
455 PF05667 DUF812: Protein of un 86.2 70 0.0015 36.8 20.8 42 117-158 67-113 (594)
456 KOG2891 Surface glycoprotein [ 86.2 42 0.00092 34.2 16.3 23 395-417 331-353 (445)
457 PF05701 WEMBL: Weak chloropla 85.9 68 0.0015 36.3 22.2 44 359-402 33-76 (522)
458 KOG0983 Mitogen-activated prot 85.8 1 2.3E-05 46.1 4.5 54 535-589 99-156 (391)
459 COG2433 Uncharacterized conser 85.7 34 0.00074 38.8 16.4 17 513-529 523-539 (652)
460 PRK10884 SH3 domain-containing 85.7 15 0.00032 36.3 12.5 28 456-483 137-164 (206)
461 KOG0976 Rho/Rac1-interacting s 85.6 55 0.0012 38.3 18.0 61 386-446 97-157 (1265)
462 TIGR01982 UbiB 2-polyprenylphe 85.5 1.4 3E-05 48.7 5.8 45 529-577 119-164 (437)
463 KOG0612 Rho-associated, coiled 85.4 67 0.0014 39.4 19.4 71 365-435 459-534 (1317)
464 PHA02562 46 endonuclease subun 85.4 71 0.0015 36.1 20.7 49 439-487 353-401 (562)
465 PRK00409 recombination and DNA 85.3 22 0.00049 42.2 16.0 18 143-160 278-295 (782)
466 KOG0163 Myosin class VI heavy 85.2 48 0.001 38.5 17.2 24 116-139 488-511 (1259)
467 KOG2751 Beclin-like protein [S 84.9 35 0.00076 37.1 15.4 53 425-477 199-251 (447)
468 PRK12274 serine/threonine prot 84.7 1.3 2.9E-05 43.9 4.7 60 530-590 4-68 (218)
469 PF11180 DUF2968: Protein of u 84.6 30 0.00066 33.5 13.5 83 365-466 101-183 (192)
470 COG2433 Uncharacterized conser 84.3 30 0.00066 39.2 15.2 34 452-485 475-508 (652)
471 PF12128 DUF3584: Protein of u 84.3 1.2E+02 0.0027 38.0 24.0 11 359-369 613-623 (1201)
472 COG1579 Zn-ribbon protein, pos 84.2 50 0.0011 33.4 22.0 49 423-471 96-144 (239)
473 TIGR00606 rad50 rad50. This fa 84.1 1E+02 0.0022 39.1 21.8 19 357-375 826-844 (1311)
474 PF08826 DMPK_coil: DMPK coile 84.1 19 0.0004 28.4 9.8 23 446-468 27-49 (61)
475 KOG0163 Myosin class VI heavy 84.1 86 0.0019 36.6 18.6 24 43-66 404-428 (1259)
476 KOG4643 Uncharacterized coiled 84.1 30 0.00066 41.3 15.6 138 357-498 202-341 (1195)
477 PF10473 CENP-F_leu_zip: Leuci 84.0 36 0.00077 31.5 20.7 59 422-480 58-116 (140)
478 COG5185 HEC1 Protein involved 83.7 75 0.0016 35.0 18.9 31 357-387 261-291 (622)
479 PF04012 PspA_IM30: PspA/IM30 83.5 49 0.0011 32.7 19.3 44 357-400 27-70 (221)
480 PF11559 ADIP: Afadin- and alp 83.2 39 0.00084 31.3 16.2 22 446-467 96-117 (151)
481 KOG0979 Structural maintenance 83.0 1.2E+02 0.0025 36.7 20.2 15 171-185 71-85 (1072)
482 KOG0195 Integrin-linked kinase 83.0 0.33 7.1E-06 49.4 -0.4 68 515-590 184-253 (448)
483 PF12072 DUF3552: Domain of un 83.0 49 0.0011 32.4 20.7 10 364-373 42-51 (201)
484 KOG0596 Dual specificity; seri 83.0 0.43 9.3E-06 53.0 0.4 57 533-590 366-426 (677)
485 KOG0971 Microtubule-associated 82.9 1.1E+02 0.0024 36.4 19.8 24 354-377 225-248 (1243)
486 PF12072 DUF3552: Domain of un 82.7 51 0.0011 32.3 19.5 22 358-379 25-46 (201)
487 KOG1167 Serine/threonine prote 82.5 0.69 1.5E-05 49.6 1.8 59 528-589 36-100 (418)
488 KOG2751 Beclin-like protein [S 82.2 32 0.00069 37.4 13.8 20 525-544 266-286 (447)
489 PTZ00121 MAEBL; Provisional 82.2 1.4E+02 0.0031 37.6 20.2 143 358-500 1600-1758(2084)
490 PF04012 PspA_IM30: PspA/IM30 82.1 55 0.0012 32.3 18.5 48 438-485 92-139 (221)
491 PRK12705 hypothetical protein; 81.9 96 0.0021 35.0 21.5 18 362-379 39-56 (508)
492 cd05040 PTKc_Ack_like Catalyti 81.8 1.3 2.7E-05 44.0 3.3 37 553-590 25-62 (257)
493 cd01994 Alpha_ANH_like_IV This 81.6 12 0.00026 36.5 9.9 90 46-162 1-96 (194)
494 PF09304 Cortex-I_coil: Cortex 81.5 36 0.00079 29.8 13.8 90 399-488 6-95 (107)
495 KOG4807 F-actin binding protei 81.3 82 0.0018 33.8 19.8 144 363-521 359-509 (593)
496 TIGR01843 type_I_hlyD type I s 81.3 83 0.0018 33.9 19.6 128 356-483 140-271 (423)
497 PF03109 ABC1: ABC1 family; I 81.2 0.75 1.6E-05 41.2 1.3 43 532-577 15-58 (119)
498 KOG0976 Rho/Rac1-interacting s 81.1 1.2E+02 0.0026 35.6 19.2 141 362-502 349-492 (1265)
499 PRK10660 tilS tRNA(Ile)-lysidi 81.0 11 0.00023 41.7 10.4 102 44-173 15-129 (436)
500 PTZ00121 MAEBL; Provisional 81.0 1.6E+02 0.0035 37.0 21.8 151 355-505 1161-1314(2084)
No 1
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases. The Serine Threonine kinases are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. The N-terminal domain is homologous to the USP family which has a ATP binding fold. The N-terminal domain is predicted to be involved in ATP binding.
Probab=99.93 E-value=1.7e-25 Score=207.23 Aligned_cols=143 Identities=36% Similarity=0.580 Sum_probs=123.1
Q ss_pred EEEEeecCChHHHHHHHHHHHHhc--CCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 46 KIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLL 123 (591)
Q Consensus 46 kIlVAVD~S~~~S~~Al~wAl~~~--~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~~ 123 (591)
+||||||+| +.|.+||+||++++ .+++|++|||.++..+.+...+ . ......+.+..++.++++|+++..
T Consensus 1 ~ILVavD~S-~~s~~al~~a~~~a~~~~~~l~ll~v~~~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~l~~~~~ 72 (146)
T cd01989 1 SVAVAVDKD-KKSKNALKWALDNLATKGQTIVLVHVHPPITSIPSSSG--K-----LEVASAYKQEEDKEAKELLLPYRC 72 (146)
T ss_pred CEEEEecCc-cccHHHHHHHHHhccCCCCcEEEEEeccCcccCCCCcc--c-----hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 599999999 99999999999988 5889999999987543221111 0 022344556677888999999999
Q ss_pred HHHHcCCceEEEEEecCChHHHHHHHHHHcCCCEEEEccCCCchhhHHhcc-CCcchHHHHhccCCCccEEEEEcCC
Q 007740 124 ICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMD-LKSKKAISVRQQAPASCHIWFICNG 199 (591)
Q Consensus 124 ~c~~~gV~~e~~vie~~~~~~~Ive~a~~~~idlIVmGs~g~~~~~R~l~G-s~s~Va~~V~~~Ap~~C~V~vV~kg 199 (591)
.|...|+.++..++.+++|++.|+++|+++++|+||||+||++++.|+|+| | |+.+|++++|++|+|+||++|
T Consensus 73 ~~~~~~~~~~~~~~~g~~~~~~I~~~a~~~~~dlIV~Gs~g~~~l~~~~~gss---va~~Vi~~a~~~c~Vlvv~~~ 146 (146)
T cd01989 73 FCSRKGVQCEDVVLEDDDVAKAIVEYVADHGITKLVMGASSDNHFSMKFKKSD---VASSVLKEAPDFCTVYVVSKG 146 (146)
T ss_pred HHhhcCCeEEEEEEeCCcHHHHHHHHHHHcCCCEEEEeccCCCceeecccCCc---hhHHHHhcCCCCceEEEEeCc
Confidence 999899999999999889999999999999999999999999999999987 5 999999999999999999997
No 2
>PRK15456 universal stress protein UspG; Provisional
Probab=99.84 E-value=2.3e-20 Score=172.44 Aligned_cols=138 Identities=16% Similarity=0.162 Sum_probs=108.9
Q ss_pred CEEEEeecCCh-HHHHHHHHHHHHhc-CCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 45 DKIYVAVAKQV-KESKSVLLWALQNS-GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL 122 (591)
Q Consensus 45 ~kIlVAVD~S~-~~S~~Al~wAl~~~-~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~ 122 (591)
++||||||+|. +.|.+|++||+.++ .+++|++|||.++...... .. .. .....+.+..++.+++.|..+.
T Consensus 3 ~~ILv~vD~S~~~~s~~al~~A~~la~~~~~l~llhv~~~~~~~~~-~~-~~------~~~~~~~~~~~~~~~~~l~~~~ 74 (142)
T PRK15456 3 KTIIMPVDVFEMELSDKAVRHAEFLAQDDGVIHLLHVLPGSASLSL-HR-FA------ADVRRFEEHLQHEAEERLQTMV 74 (142)
T ss_pred ccEEEeccCCchhHHHHHHHHHHHHHhcCCeEEEEEEecCcccccc-cc-cc------cchhhHHHHHHHHHHHHHHHHH
Confidence 58999999982 38999999999887 4568999999987532111 10 00 1123455566777788888887
Q ss_pred HHHHHcCCceEEEEEecCChHHHHHHHHHHcCCCEEEEccCCCchhhHHhccCCcchHHHHhccCCCccEEEEEc
Q 007740 123 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFIC 197 (591)
Q Consensus 123 ~~c~~~gV~~e~~vie~~~~~~~Ive~a~~~~idlIVmGs~g~~~~~R~l~Gs~s~Va~~V~~~Ap~~C~V~vV~ 197 (591)
..+...+++++..+..| +|++.|+++|+++++|+||||+||++ +.+.|+|| |+.+|+++++ |+|+||.
T Consensus 75 ~~~~~~~~~v~~~v~~G-~~~~~I~~~a~~~~~DLIVmG~~g~~-~~~~llGS---~a~~v~~~a~--~pVLvV~ 142 (142)
T PRK15456 75 SHFTIDPSRIKQHVRFG-SVRDEVNELAEELGADVVVIGSRNPS-ISTHLLGS---NASSVIRHAN--LPVLVVR 142 (142)
T ss_pred HHhCCCCcceEEEEcCC-ChHHHHHHHHhhcCCCEEEEcCCCCC-ccceecCc---cHHHHHHcCC--CCEEEeC
Confidence 77665678888766665 78999999999999999999999976 88899998 9999999999 9999983
No 3
>PRK15005 universal stress protein F; Provisional
Probab=99.82 E-value=1.6e-19 Score=166.70 Aligned_cols=138 Identities=14% Similarity=0.207 Sum_probs=104.1
Q ss_pred CEEEEeecCChHH--HHHHHHHHHHhc--CCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 007740 45 DKIYVAVAKQVKE--SKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDM 120 (591)
Q Consensus 45 ~kIlVAVD~S~~~--S~~Al~wAl~~~--~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~ 120 (591)
++||||||+| +. +.+|++||++++ .+++|++|||+++.+.....+..... .. .. ....++.+++.|..
T Consensus 3 ~~ILv~~D~s-~~~~~~~a~~~a~~la~~~~~~l~ll~v~~~~~~~~~~~~~~~~-~~--~~----~~~~~~~~~~~l~~ 74 (144)
T PRK15005 3 RTILVPIDIS-DSELTQRVISHVEAEAKIDDAEVHFLTVIPSLPYYASLGLAYSA-EL--PA----MDDLKAEAKSQLEE 74 (144)
T ss_pred ccEEEecCCC-chhHHHHHHHHHHHHHhccCCeEEEEEEEccCcccccccccccc-cc--hH----HHHHHHHHHHHHHH
Confidence 5899999999 77 589999999988 68999999999865322111110000 00 01 12234455566666
Q ss_pred HHHHHHHcCCceEEEEEecCChHHHHHHHHHHcCCCEEEEccCCCchhhHHhccCCcchHHHHhccCCCccEEEEEc
Q 007740 121 CLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFIC 197 (591)
Q Consensus 121 ~~~~c~~~gV~~e~~vie~~~~~~~Ive~a~~~~idlIVmGs~g~~~~~R~l~Gs~s~Va~~V~~~Ap~~C~V~vV~ 197 (591)
+...+...+++++..+..| +|++.|+++|+++++|+||||+|+ +++.+.++|| ++.+|++++| |+||||.
T Consensus 75 ~~~~~~~~~~~~~~~v~~G-~p~~~I~~~a~~~~~DLIV~Gs~~-~~~~~~llGS---~a~~vl~~a~--cpVlvVr 144 (144)
T PRK15005 75 IIKKFKLPTDRVHVHVEEG-SPKDRILELAKKIPADMIIIASHR-PDITTYLLGS---NAAAVVRHAE--CSVLVVR 144 (144)
T ss_pred HHHHhCCCCCceEEEEeCC-CHHHHHHHHHHHcCCCEEEEeCCC-CCchheeecc---hHHHHHHhCC--CCEEEeC
Confidence 6666666677777776665 789999999999999999999994 6799999999 9999999999 9999983
No 4
>PRK09982 universal stress protein UspD; Provisional
Probab=99.79 E-value=1.8e-18 Score=160.21 Aligned_cols=134 Identities=14% Similarity=0.145 Sum_probs=101.4
Q ss_pred CEEEEeecCChHHHHHHHHHHHHhc--CCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 45 DKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL 122 (591)
Q Consensus 45 ~kIlVAVD~S~~~S~~Al~wAl~~~--~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~ 122 (591)
++||||||+| +.|.+||+||+.++ .+++|+++||.++.+... .+..++ ....+.+..++.+++.|.++.
T Consensus 4 k~ILvavD~S-~~s~~al~~A~~lA~~~~a~l~llhV~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~l~~~~ 74 (142)
T PRK09982 4 KHIGVAISGN-EEDALLVNKALELARHNDAHLTLIHIDDGLSELY-PGIYFP-------ATEDILQLLKNKSDNKLYKLT 74 (142)
T ss_pred eEEEEEecCC-cchHHHHHHHHHHHHHhCCeEEEEEEccCcchhc-hhhhcc-------chHHHHHHHHHHHHHHHHHHH
Confidence 6899999999 99999999999988 799999999997653211 011111 012233445566667777776
Q ss_pred HHHHHcCCceEEEEEecCChHHHHHHHHHHcCCCEEEEccCCCchhhHHhccCCcchHHHHhccCCCccEEEEEcC
Q 007740 123 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICN 198 (591)
Q Consensus 123 ~~c~~~gV~~e~~vie~~~~~~~Ive~a~~~~idlIVmGs~g~~~~~R~l~Gs~s~Va~~V~~~Ap~~C~V~vV~k 198 (591)
..+. ...++..+.. ++|++.|+++|++.++|+||||+| ++++.+++ + ||.+|+++++ |+|+||..
T Consensus 75 ~~~~--~~~~~~~v~~-G~p~~~I~~~A~~~~aDLIVmG~~-~~~~~~~~--~---va~~V~~~s~--~pVLvv~~ 139 (142)
T PRK09982 75 KNIQ--WPKTKLRIER-GEMPETLLEIMQKEQCDLLVCGHH-HSFINRLM--P---AYRGMINKMS--ADLLIVPF 139 (142)
T ss_pred HhcC--CCcceEEEEe-cCHHHHHHHHHHHcCCCEEEEeCC-hhHHHHHH--H---HHHHHHhcCC--CCEEEecC
Confidence 6553 2344444444 589999999999999999999986 89999888 3 9999999999 99999953
No 5
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family. The family of KdpD sensor kinase proteins regulates the kdpFABC operon responsible for potassium transport. The USP domain is homologous to the universal stress protein Usp Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity.
Probab=99.79 E-value=1.8e-18 Score=155.55 Aligned_cols=121 Identities=12% Similarity=0.235 Sum_probs=102.3
Q ss_pred EEEEeecCChHHHHHHHHHHHHhc--CCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 46 KIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLL 123 (591)
Q Consensus 46 kIlVAVD~S~~~S~~Al~wAl~~~--~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~~ 123 (591)
+||||||+| +.++.||+||+.++ .++.|++|||.++... . ....+++.|+.+..
T Consensus 1 ~Ilv~vd~s-~~s~~al~~a~~la~~~~~~l~ll~v~~~~~~------~-----------------~~~~~~~~l~~~~~ 56 (124)
T cd01987 1 RILVCISGG-PNAERLIRRAARLADRLKAPWYVVYVETPRLN------R-----------------LSEAERRRLAEALR 56 (124)
T ss_pred CEEEEECCC-cchHHHHHHHHHHHHHhCCCEEEEEEecCccc------c-----------------CCHHHHHHHHHHHH
Confidence 599999999 99999999999988 6889999999875421 0 01234567788888
Q ss_pred HHHHcCCceEEEEEecCChHHHHHHHHHHcCCCEEEEccCCCchhhHHhccCCcchHHHHhccCCCccEEEEE
Q 007740 124 ICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI 196 (591)
Q Consensus 124 ~c~~~gV~~e~~vie~~~~~~~Ive~a~~~~idlIVmGs~g~~~~~R~l~Gs~s~Va~~V~~~Ap~~C~V~vV 196 (591)
.+.+.++.+ .++.+++++++|+++++++++|+||||+||++++.++++|| ++.+|++++ ..|+|||+
T Consensus 57 ~~~~~~~~~--~~~~~~~~~~~I~~~~~~~~~dllviG~~~~~~~~~~~~Gs---~~~~v~~~a-~~~~v~v~ 123 (124)
T cd01987 57 LAEELGAEV--VTLPGDDVAEAIVEFAREHNVTQIVVGKSRRSRWRELFRGS---LVDRLLRRA-GNIDVHIV 123 (124)
T ss_pred HHHHcCCEE--EEEeCCcHHHHHHHHHHHcCCCEEEeCCCCCchHHHHhccc---HHHHHHHhC-CCCeEEEe
Confidence 888777754 45667789999999999999999999999999999999999 999999999 34999997
No 6
>PRK15118 universal stress global response regulator UspA; Provisional
Probab=99.78 E-value=1.9e-18 Score=159.83 Aligned_cols=134 Identities=15% Similarity=0.185 Sum_probs=96.9
Q ss_pred CEEEEeecCChHHHHHHHHHHHHhc--CCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 45 DKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL 122 (591)
Q Consensus 45 ~kIlVAVD~S~~~S~~Al~wAl~~~--~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~ 122 (591)
++||||||+| +.|..||+||+.++ .+++|+||||..+.... ..+..+ .....+.+...+...+.|..
T Consensus 4 ~~ILvavD~S-~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~--~~~~~~------~~~~~~~~~~~~~~~~~l~~-- 72 (144)
T PRK15118 4 KHILIAVDLS-PESKVLVEKAVSMARPYNAKVSLIHVDVNYSDL--YTGLID------VNLGDMQKRISEETHHALTE-- 72 (144)
T ss_pred eEEEEEccCC-hhHHHHHHHHHHHHHhhCCEEEEEEEccChhhh--hhhhhh------cchHHHHHHHHHHHHHHHHH--
Confidence 6899999999 99999999999988 58899999995332111 011000 01122333333444444444
Q ss_pred HHHHHcCCceEEEEEecCChHHHHHHHHHHcCCCEEEEccCCCchhhHHhccCCcchHHHHhccCCCccEEEEEcC
Q 007740 123 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICN 198 (591)
Q Consensus 123 ~~c~~~gV~~e~~vie~~~~~~~Ive~a~~~~idlIVmGs~g~~~~~R~l~Gs~s~Va~~V~~~Ap~~C~V~vV~k 198 (591)
++...|+.+...++..++|++.|+++|+++++|+||||+|| +.+.+ +|| ||.+|+++++ |+|+||..
T Consensus 73 -~~~~~~~~~~~~~~~~G~p~~~I~~~a~~~~~DLIV~Gs~~-~~~~~--lgS---va~~v~~~a~--~pVLvv~~ 139 (144)
T PRK15118 73 -LSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCGHHQ-DFWSK--LMS---SARQLINTVH--VDMLIVPL 139 (144)
T ss_pred -HHHhCCCCceEEEEEecCHHHHHHHHHHHhCCCEEEEeCcc-cHHHH--HHH---HHHHHHhhCC--CCEEEecC
Confidence 34566888765666666899999999999999999999997 44443 467 9999999999 99999963
No 7
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea . Na+/H+ exchange proteins eject protons from cells, effectively eliminating excess acid from actively metabolising cells. Na+ /H+ exchange activity is also crucial for the regulation of cell volume, and for the reabsorption of NaCl across renal, intestinal, and other epithelia. These antiports exchange Na+ for H+ in an electroneutral manner, and this activity is carried out by a family of Na+ /H+ exchangers, or NHEs, which are known to be present in both prokaryotic and eukaryotic cells. These exchangers are highly-regulated (glyco)phosphoproteins, which, based on their primary structure, appear to contain 10-12 membrane-spanning regions (M) at the N-terminus and a large cytoplasmic region at the C-terminus. The transmembrane regions M3-M12 share identity wit h other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the regio
Probab=99.77 E-value=7.5e-18 Score=152.35 Aligned_cols=130 Identities=18% Similarity=0.218 Sum_probs=110.9
Q ss_pred EEEEeecCChHHHHHHHHHHHHhc--CCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 46 KIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLL 123 (591)
Q Consensus 46 kIlVAVD~S~~~S~~Al~wAl~~~--~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~~ 123 (591)
+||||||++ +.+..+|+||..++ .+++|+++||++++..... . ......+..++.+..+..
T Consensus 1 ~ILv~vd~s-~~~~~~l~~a~~la~~~~~~v~ll~v~~~~~~~~~-------~---------~~~~~~~~~~~~~~~~~~ 63 (132)
T cd01988 1 RILVPVANP-NTARDLLELAAALARAQNGEIIPLNVIEVPNHSSP-------S---------QLEVNVQRARKLLRQAER 63 (132)
T ss_pred CEEEecCCc-hhHHHHHHHHHHHhhcCCCeEEEEEEEecCCCCCc-------c---------hhHHHHHHHHHHHHHHHH
Confidence 599999999 99999999999988 6889999999987532110 0 011234566788899999
Q ss_pred HHHHcCCceEEEEEecCChHHHHHHHHHHcCCCEEEEccCCCchhhHHhccCCcchHHHHhccCCCccEEEEEc
Q 007740 124 ICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFIC 197 (591)
Q Consensus 124 ~c~~~gV~~e~~vie~~~~~~~Ive~a~~~~idlIVmGs~g~~~~~R~l~Gs~s~Va~~V~~~Ap~~C~V~vV~ 197 (591)
.+...|++++..+..++++...|+++++++++|+||||+++++++.+.++|| ++.+|+++++ |+|++|.
T Consensus 64 ~~~~~g~~~~~~~~~~~~~~~~I~~~a~~~~~dlIV~G~~~~~~~~~~~lGs---~~~~v~~~~~--~pvlvv~ 132 (132)
T cd01988 64 IAASLGVPVHTIIRIDHDIASGILRTAKERQADLIIMGWHGSTSLRDRLFGG---VIDQVLESAP--CDVAVVK 132 (132)
T ss_pred HhhhcCCceEEEEEecCCHHHHHHHHHHhcCCCEEEEecCCCCCccceecCc---hHHHHHhcCC--CCEEEeC
Confidence 9989999998888777789999999999999999999999999999999998 9999999999 9999983
No 8
>PRK10116 universal stress protein UspC; Provisional
Probab=99.75 E-value=2.1e-17 Score=152.14 Aligned_cols=133 Identities=18% Similarity=0.230 Sum_probs=104.8
Q ss_pred CEEEEeecCChHHHHHHHHHHHHhc--CCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 45 DKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL 122 (591)
Q Consensus 45 ~kIlVAVD~S~~~S~~Al~wAl~~~--~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~ 122 (591)
++||||+|+| +.+..||++|+.++ .+++|+++||++++.... . + .....+.+.+...+++++.|..+
T Consensus 4 ~~ILv~~D~s-~~s~~al~~A~~lA~~~~a~l~ll~v~~~~~~~~--~--~-----~~~~~~~~~~~~~~~~~~~l~~~- 72 (142)
T PRK10116 4 SNILVAVAVT-PESQQLLAKAVSIARPVNGKISLITLASDPEMYN--Q--F-----AAPMLEDLRSVMQEETQSFLDKL- 72 (142)
T ss_pred ceEEEEccCC-cchHHHHHHHHHHHHHhCCEEEEEEEccCcccch--h--h-----hHHHHHHHHHHHHHHHHHHHHHH-
Confidence 6999999999 99999999999988 588999999987643211 0 1 11223445555555556666554
Q ss_pred HHHHHcCCceEEEEEecCChHHHHHHHHHHcCCCEEEEccCCCchhhHHhccCCcchHHHHhccCCCccEEEEEc
Q 007740 123 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFIC 197 (591)
Q Consensus 123 ~~c~~~gV~~e~~vie~~~~~~~Ive~a~~~~idlIVmGs~g~~~~~R~l~Gs~s~Va~~V~~~Ap~~C~V~vV~ 197 (591)
+...|++....++..+++.+.|+++|+++++|+||||+||++++.+.+ | |+.+|+++++ |+|+||.
T Consensus 73 --~~~~~~~~~~~~~~~G~~~~~I~~~a~~~~~DLiV~g~~~~~~~~~~~--s---~a~~v~~~~~--~pVLvv~ 138 (142)
T PRK10116 73 --IQDADYPIEKTFIAYGELSEHILEVCRKHHFDLVICGNHNHSFFSRAS--C---SAKRVIASSE--VDVLLVP 138 (142)
T ss_pred --HHhcCCCeEEEEEecCCHHHHHHHHHHHhCCCEEEEcCCcchHHHHHH--H---HHHHHHhcCC--CCEEEEe
Confidence 455688766666667789999999999999999999999999999875 5 9999999999 9999984
No 9
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA [] reveals an alpha/beta fold similar to that of the Methanocaldococcus jannaschii (Methanococcus jannaschii) MJ0577 protein, which binds ATP [], though UspA lacks ATP-binding activity.; GO: 0006950 response to stress; PDB: 3DLO_C 3QTB_A 2PFS_A 3TNJ_A 1JMV_D 3FH0_B 3FDX_B 3AB7_A 3AB8_A 2GM3_F ....
Probab=99.74 E-value=2.1e-17 Score=148.78 Aligned_cols=135 Identities=20% Similarity=0.294 Sum_probs=101.4
Q ss_pred CEEEEeecCChHHHHHHHHHHHHhc--CCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 45 DKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL 122 (591)
Q Consensus 45 ~kIlVAVD~S~~~S~~Al~wAl~~~--~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~ 122 (591)
++||||+|++ +.+..|++||+.++ .+++|++|||.++........ ........ .............
T Consensus 3 ~~Ilv~~d~~-~~~~~al~~a~~la~~~~~~i~~l~v~~~~~~~~~~~----------~~~~~~~~-~~~~~~~~~~~~~ 70 (140)
T PF00582_consen 3 KRILVAIDGS-EESRRALRFALELAKRSGAEITLLHVIPPPPQYSFSA----------AEDEESEE-EAEEEEQARQAEA 70 (140)
T ss_dssp SEEEEEESSS-HHHHHHHHHHHHHHHHHTCEEEEEEEEESCHCHHHHH----------HHHHHHHH-HHHHHHHHHHHHH
T ss_pred CEEEEEECCC-HHHHHHHHHHHHHHHhhCCeEEEEEeecccccccccc----------cccccccc-ccchhhhhhhHHH
Confidence 6999999999 99999999999988 699999999998764321100 00000000 0011111111111
Q ss_pred HHHHHcCCceEEEEEecCChHHHHHHHHHHcCCCEEEEccCCCchhhHHhccCCcchHHHHhccCCCccEEEEE
Q 007740 123 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI 196 (591)
Q Consensus 123 ~~c~~~gV~~e~~vie~~~~~~~Ive~a~~~~idlIVmGs~g~~~~~R~l~Gs~s~Va~~V~~~Ap~~C~V~vV 196 (591)
..+...+.......+..+++.++|+++++++++|+||||+++++++.+.++|+ ++.+|++++| |+|+||
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~dliv~G~~~~~~~~~~~~gs---~~~~l~~~~~--~pVlvv 139 (140)
T PF00582_consen 71 EEAEAEGGIVIEVVIESGDVADAIIEFAEEHNADLIVMGSRGRSGLERLLFGS---VAEKLLRHAP--CPVLVV 139 (140)
T ss_dssp HHHHHHTTSEEEEEEEESSHHHHHHHHHHHTTCSEEEEESSSTTSTTTSSSHH---HHHHHHHHTS--SEEEEE
T ss_pred HHHhhhccceeEEEEEeeccchhhhhccccccceeEEEeccCCCCccCCCcCC---HHHHHHHcCC--CCEEEe
Confidence 44555667777777778899999999999999999999999999999999888 9999999999 999998
No 10
>PRK11175 universal stress protein UspE; Provisional
Probab=99.69 E-value=3.3e-16 Score=162.77 Aligned_cols=142 Identities=11% Similarity=0.100 Sum_probs=113.0
Q ss_pred CEEEEeecCChHHHHHHHHHHHHhc--CCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 45 DKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCL 122 (591)
Q Consensus 45 ~kIlVAVD~S~~~S~~Al~wAl~~~--~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~ 122 (591)
++||||+|+| +.|..||.||+.++ .+++|++|||.++.... ..+. +.........+...+..++.|+.+.
T Consensus 4 ~~ILv~~D~s-~~~~~al~~a~~lA~~~~a~l~ll~v~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~ 75 (305)
T PRK11175 4 QNILVVIDPN-QDDQPALRRAVYLAQRNGGKITAFLPIYDFSYE-MTTL------LSPDEREAMRQGVISQRTAWIREQA 75 (305)
T ss_pred ceEEEEcCCC-ccccHHHHHHHHHHHhcCCCEEEEEeccCchhh-hhcc------cchhHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999999 99999999999988 68899999998653211 1110 1112222233333445667788887
Q ss_pred HHHHHcCCceEEEEEecCChHHHHHHHHHHcCCCEEEEccCCCchhhHHhccCCcchHHHHhccCCCccEEEEEcCC
Q 007740 123 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICNG 199 (591)
Q Consensus 123 ~~c~~~gV~~e~~vie~~~~~~~Ive~a~~~~idlIVmGs~g~~~~~R~l~Gs~s~Va~~V~~~Ap~~C~V~vV~kg 199 (591)
..+...|++++..++..+++.+.|+++|.++++|+||||++|.+++.+.++|| ++..|++++| |+||+|..+
T Consensus 76 ~~~~~~~~~~~~~v~~~g~~~~~i~~~a~~~~~DLiV~G~~~~~~~~~~~~gs---~~~~l~~~~~--~pvlvv~~~ 147 (305)
T PRK11175 76 KPYLDAGIPIEIKVVWHNRPFEAIIQEVIAGGHDLVVKMTHQHDKLESVIFTP---TDWHLLRKCP--CPVLMVKDQ 147 (305)
T ss_pred HHHhhcCCceEEEEecCCCcHHHHHHHHHhcCCCEEEEeCCCCcHHHhhccCh---hHHHHHhcCC--CCEEEeccc
Confidence 77777899998877766789999999999999999999999999999999998 9999999999 999999753
No 11
>cd00293 USP_Like Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.
Probab=99.63 E-value=6.3e-15 Score=131.26 Aligned_cols=128 Identities=24% Similarity=0.394 Sum_probs=108.3
Q ss_pred EEEEeecCChHHHHHHHHHHHHhc--CCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 46 KIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLL 123 (591)
Q Consensus 46 kIlVAVD~S~~~S~~Al~wAl~~~--~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~~ 123 (591)
+||||+|++ ..+..+++||++.+ .++.|+++||.++....+. .+.+....+.++.|..+..
T Consensus 1 ~ilv~i~~~-~~~~~~l~~a~~~a~~~~~~i~~l~v~~~~~~~~~----------------~~~~~~~~~~~~~l~~~~~ 63 (130)
T cd00293 1 RILVAVDGS-EESERALRWAARLARRLGAELVLLHVVDPPPSSAA----------------ELAELLEEEARALLEALRE 63 (130)
T ss_pred CEEEEeCCC-HHHHHHHHHHHHHHHhcCCEEEEEEEecCCCCcch----------------hHHHHHHHHHHHHHHHHHH
Confidence 599999999 99999999999988 6899999999876532110 2233455667889999999
Q ss_pred HHHHcCCceEEEEEecCChHHHHHHHHHHcCCCEEEEccCCCchhhHHhccCCcchHHHHhccCCCccEEEEE
Q 007740 124 ICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI 196 (591)
Q Consensus 124 ~c~~~gV~~e~~vie~~~~~~~Ive~a~~~~idlIVmGs~g~~~~~R~l~Gs~s~Va~~V~~~Ap~~C~V~vV 196 (591)
.|...|+++...+..+ ++.++|+++++++++|+||||+++++.+.+.+.|+ ++.+++++++ |+||+|
T Consensus 64 ~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~dlvvig~~~~~~~~~~~~~~---~~~~ll~~~~--~pvliv 130 (130)
T cd00293 64 ALAEAGVKVETVVLEG-DPAEAILEAAEELGADLIVMGSRGRSGLRRLLLGS---VAERVLRHAP--CPVLVV 130 (130)
T ss_pred HHhcCCCceEEEEecC-CCHHHHHHHHHHcCCCEEEEcCCCCCccceeeecc---HHHHHHhCCC--CCEEeC
Confidence 8888899988777766 45999999999999999999999999999999888 9999999987 999985
No 12
>PRK11175 universal stress protein UspE; Provisional
Probab=99.62 E-value=3.6e-15 Score=155.02 Aligned_cols=138 Identities=16% Similarity=0.212 Sum_probs=101.0
Q ss_pred CCEEEEeecCChHH-------HHHHHHHHHHhc--C-CCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHH
Q 007740 44 EDKIYVAVAKQVKE-------SKSVLLWALQNS--G-GKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQD 113 (591)
Q Consensus 44 ~~kIlVAVD~S~~~-------S~~Al~wAl~~~--~-g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (591)
.++||||+|+| +. +..||++|+..+ . +++|+||||+++..... ....+. .....+.+..+..
T Consensus 152 ~~~Ilva~D~s-~~~~~~~~~~~~al~~a~~la~~~~~a~l~ll~v~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~ 223 (305)
T PRK11175 152 GGKILVAVNVA-SEEPYHDALNEKLVEEAIDLAEQLNHAEVHLVNAYPVTPINI--AIELPE-----FDPSVYNDAIRGQ 223 (305)
T ss_pred CCeEEEEeCCC-CCccchhHHHHHHHHHHHHHHhhCcCCceEEEEEecCcchhc--cccccc-----cchhhHHHHHHHH
Confidence 47999999998 54 368999999877 4 88999999987543211 001110 0112233333334
Q ss_pred HHHHHHHHHHHHHHcCCceEEEEEecCChHHHHHHHHHHcCCCEEEEccCCCchhhHHhccCCcchHHHHhccCCCccEE
Q 007740 114 MHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHI 193 (591)
Q Consensus 114 ~~~lL~~~~~~c~~~gV~~e~~vie~~~~~~~Ive~a~~~~idlIVmGs~g~~~~~R~l~Gs~s~Va~~V~~~Ap~~C~V 193 (591)
..+.+..+ +...++.+...++..+++...|+++|+++++|+||||++|++++.++|+|| ++.+|++++| |+|
T Consensus 224 ~~~~l~~~---~~~~~~~~~~~~v~~G~~~~~I~~~a~~~~~DLIVmG~~~~~~~~~~llGS---~a~~v~~~~~--~pV 295 (305)
T PRK11175 224 HLLAMKAL---RQKFGIDEEQTHVEEGLPEEVIPDLAEHLDAELVILGTVGRTGLSAAFLGN---TAEHVIDHLN--CDL 295 (305)
T ss_pred HHHHHHHH---HHHhCCChhheeeccCCHHHHHHHHHHHhCCCEEEECCCccCCCcceeecc---hHHHHHhcCC--CCE
Confidence 44444444 444577765455555689999999999999999999999999999999999 9999999999 999
Q ss_pred EEEc
Q 007740 194 WFIC 197 (591)
Q Consensus 194 ~vV~ 197 (591)
++|.
T Consensus 296 Lvv~ 299 (305)
T PRK11175 296 LAIK 299 (305)
T ss_pred EEEc
Confidence 9995
No 13
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms]
Probab=99.58 E-value=5.6e-14 Score=129.58 Aligned_cols=144 Identities=19% Similarity=0.247 Sum_probs=113.6
Q ss_pred CCEEEEeec-CChHHHHHHHHHHHHhc--CCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 007740 44 EDKIYVAVA-KQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDM 120 (591)
Q Consensus 44 ~~kIlVAVD-~S~~~S~~Al~wAl~~~--~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~ 120 (591)
-++|++++| ++ +.+..|+.+|+..+ .+..+.++||.++.............. . ............++.+..
T Consensus 5 ~~~il~~~d~~s-~~~~~a~~~a~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~ 78 (154)
T COG0589 5 YKKILVAVDVGS-EAAEKALEEAVALAKRLGAPLILLVVIDPLEPTALVSVALADA----P-IPLSEEELEEEAEELLAE 78 (154)
T ss_pred cceEEEEeCCCC-HHHHHHHHHHHHHHHhcCCeEEEEEEecccccccccccccccc----h-hhhhHHHHHHHHHHHHHH
Confidence 469999999 99 99999999999987 678899999997754321111100000 0 111223345666788888
Q ss_pred HHHHHHHcCCce-EEEEEecCChHHHHHHHHHHcCCCEEEEccCCCchhhHHhccCCcchHHHHhccCCCccEEEEEcC
Q 007740 121 CLLICRQMGVRA-EKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICN 198 (591)
Q Consensus 121 ~~~~c~~~gV~~-e~~vie~~~~~~~Ive~a~~~~idlIVmGs~g~~~~~R~l~Gs~s~Va~~V~~~Ap~~C~V~vV~k 198 (591)
+.+.....|+.. +..+..|.++...|++++.+.++|+||||++|++++.++++|| |+.+|+++++ |+|++|..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~a~~~~adliV~G~~g~~~l~~~llGs---vs~~v~~~~~--~pVlvv~~ 152 (154)
T COG0589 79 AKALAEAAGVPVVETEVVEGSPSAEEILELAEEEDADLIVVGSRGRSGLSRLLLGS---VAEKVLRHAP--CPVLVVRS 152 (154)
T ss_pred HHHHHHHcCCCeeEEEEecCCCcHHHHHHHHHHhCCCEEEECCCCCccccceeeeh---hHHHHHhcCC--CCEEEEcc
Confidence 888899999984 7777777666899999999999999999999999999999998 9999999999 99999863
No 14
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.37 E-value=7.4e-13 Score=141.20 Aligned_cols=76 Identities=45% Similarity=0.641 Sum_probs=68.6
Q ss_pred cccccCHHHHHHhhcCCCcCCccccccceeEEEEEEc-CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 514 FFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 514 ~~~~~s~~el~~aT~~F~~~~~iG~G~~G~Vykg~l~-g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
..+.|+|.+|..||+||+..++||+||||.||+|.+. |+.||||++.....+...+|.+|+.++ ++++|||||+|+
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~l-s~l~H~Nlv~Ll 137 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEIL-SRLRHPNLVKLL 137 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHH-hcCCCcCcccEE
Confidence 5788999999999999999999999999999999998 589999999775543145699999999 999999999986
No 15
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed
Probab=99.32 E-value=1.3e-11 Score=130.52 Aligned_cols=101 Identities=12% Similarity=0.198 Sum_probs=78.5
Q ss_pred CCEEEEeecCChHHHHHHHHHHHHhc--C--CCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 007740 44 EDKIYVAVAKQVKESKSVLLWALQNS--G--GKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLD 119 (591)
Q Consensus 44 ~~kIlVAVD~S~~~S~~Al~wAl~~~--~--g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~ 119 (591)
-+||||||||| +.|++|+++|++++ . +++|++|||.++..... .. ......++++++
T Consensus 5 ykkILVavDGS-e~S~~Al~~AielA~~~g~~AeL~lL~Vv~~~~~~~--~~----------------~~~~~~~eelle 65 (357)
T PRK12652 5 ANRLLVPVADS-VTVRQTVAYAVESAEEAAETPTVHLVAAASGRAVDP--EG----------------QDELAAAEELLE 65 (357)
T ss_pred cCeEEEEeCCC-HHHHHHHHHHHHHHHhcCCCCEEEEEEEecCccccc--ch----------------hHHHHHHHHHHH
Confidence 37999999999 99999999999988 2 48999999998643211 00 112234455666
Q ss_pred HHHHHHHH------cCCceEEEEEec-------CChHHHHHHHHHHcCCCEEEEccC
Q 007740 120 MCLLICRQ------MGVRAEKLDTES-------ESTEKGILELISHYGIRKLVMGAA 163 (591)
Q Consensus 120 ~~~~~c~~------~gV~~e~~vie~-------~~~~~~Ive~a~~~~idlIVmGs~ 163 (591)
.+.+.+.. .||++++.++.+ ++|++.|++||++++||+||||-.
T Consensus 66 ~~~~~~~~~l~~~~~gV~ve~~vv~~~~~~~~~G~pae~Iv~~Aee~~aDLIVm~~~ 122 (357)
T PRK12652 66 RVEVWATEDLGDDASSVTIETALLGTDEYLFGPGDYAEVLIAYAEEHGIDRVVLDPE 122 (357)
T ss_pred HHHHHHHHhhhcccCCCceEEEEEeccccccCCCCHHHHHHHHHHHcCCCEEEECCC
Confidence 66666554 599999888774 699999999999999999999975
No 16
>PRK10490 sensor protein KdpD; Provisional
Probab=98.87 E-value=1.7e-08 Score=119.77 Aligned_cols=125 Identities=15% Similarity=0.258 Sum_probs=99.9
Q ss_pred CCCEEEEeecCChHHHHHHHHHHHHhc--CCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 007740 43 IEDKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDM 120 (591)
Q Consensus 43 ~~~kIlVAVD~S~~~S~~Al~wAl~~~--~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~ 120 (591)
..++|||+|+++ +.+.+.+++|.+++ .++.+++|||..+.. ...+ .+. ..-+..
T Consensus 249 ~~eriLV~v~~~-~~~~~lIr~~~rlA~~~~a~~~~l~V~~~~~------~~~~----------------~~~-~~~l~~ 304 (895)
T PRK10490 249 TRDAILLCIGHN-TGSEKLVRTAARLAARLGSVWHAVYVETPRL------HRLP----------------EKK-RRAILS 304 (895)
T ss_pred cCCeEEEEECCC-cchHHHHHHHHHHHHhcCCCEEEEEEecCCc------CcCC----------------HHH-HHHHHH
Confidence 568999999999 99999999999988 688999999986631 0000 011 223444
Q ss_pred HHHHHHHcCCceEEEEEecCChHHHHHHHHHHcCCCEEEEccCCCchhhHHhccCCcchHHHHhccCCCccEEEEEcCC
Q 007740 121 CLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFICNG 199 (591)
Q Consensus 121 ~~~~c~~~gV~~e~~vie~~~~~~~Ive~a~~~~idlIVmGs~g~~~~~R~l~Gs~s~Va~~V~~~Ap~~C~V~vV~kg 199 (591)
+..+|++.|.+ .+++.++|+++.|++||++++++.||||.++++++ ++.|| ++..+++.++ ..+|+||...
T Consensus 305 ~~~lA~~lGa~--~~~~~~~dva~~i~~~A~~~~vt~IViG~s~~~~~--~~~~s---~~~~l~r~~~-~idi~iv~~~ 375 (895)
T PRK10490 305 ALRLAQELGAE--TATLSDPAEEKAVLRYAREHNLGKIIIGRRASRRW--WRRES---FADRLARLGP-DLDLVIVALD 375 (895)
T ss_pred HHHHHHHcCCE--EEEEeCCCHHHHHHHHHHHhCCCEEEECCCCCCCC--ccCCC---HHHHHHHhCC-CCCEEEEeCC
Confidence 44688888876 55778999999999999999999999999999876 44556 9999999998 5999999643
No 17
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]
Probab=98.74 E-value=1.5e-07 Score=105.95 Aligned_cols=133 Identities=15% Similarity=0.185 Sum_probs=111.5
Q ss_pred cccCCCEEEEeecCChHHHHHHHHHHHHhc--CCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 007740 40 ASVIEDKIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNH 117 (591)
Q Consensus 40 ~~~~~~kIlVAVD~S~~~S~~Al~wAl~~~--~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 117 (591)
.+...++|||+|+++ ..|.+.++||...+ .++..++|||-.|.... ..+.....
T Consensus 244 ~~~~~e~ilvcI~~~-~~~e~liR~a~RlA~~~~a~~~av~v~~~~~~~-----------------------~~~~~~~~ 299 (890)
T COG2205 244 VWAARERILVCISGS-PGSEKLIRRAARLASRLHAKWTAVYVETPELHR-----------------------LSEKEARR 299 (890)
T ss_pred cccccceEEEEECCC-CchHHHHHHHHHHHHHhCCCeEEEEEecccccc-----------------------ccHHHHHH
Confidence 344668999999999 99999999999988 78999999998775311 11233456
Q ss_pred HHHHHHHHHHcCCceEEEEEecCChHHHHHHHHHHcCCCEEEEccCCCchhhHHhccCCcchHHHHhccCCCccEEEEEc
Q 007740 118 LDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFIC 197 (591)
Q Consensus 118 L~~~~~~c~~~gV~~e~~vie~~~~~~~Ive~a~~~~idlIVmGs~g~~~~~R~l~Gs~s~Va~~V~~~Ap~~C~V~vV~ 197 (591)
|.....+|++-| ++++++.+++++++|++||..+++++||||.+.++.+.++|.|+ .+.++++.++ ..+|++|.
T Consensus 300 l~~~~~Lae~lG--ae~~~l~~~dv~~~i~~ya~~~~~TkiViG~~~~~rw~~~~~~~---l~~~L~~~~~-~idv~ii~ 373 (890)
T COG2205 300 LHENLRLAEELG--AEIVTLYGGDVAKAIARYAREHNATKIVIGRSRRSRWRRLFKGS---LADRLAREAP-GIDVHIVA 373 (890)
T ss_pred HHHHHHHHHHhC--CeEEEEeCCcHHHHHHHHHHHcCCeeEEeCCCcchHHHHHhccc---HHHHHHhcCC-CceEEEee
Confidence 777788888766 45678889999999999999999999999999999999999877 9999999998 59999998
Q ss_pred CCcee
Q 007740 198 NGNLI 202 (591)
Q Consensus 198 kgk~~ 202 (591)
.+...
T Consensus 374 ~~~~~ 378 (890)
T COG2205 374 LDAPP 378 (890)
T ss_pred CCCCc
Confidence 76554
No 18
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=98.38 E-value=3.1e-07 Score=98.03 Aligned_cols=56 Identities=29% Similarity=0.547 Sum_probs=48.2
Q ss_pred CccccccceeEEEEEEcCeE-EEEEEccCCCCCC--hhHHHHHHHHHHcCCCCCCccccc
Q 007740 534 LKIGEGGYGSIYKGLLRHMQ-VAIKMLHPHSLQG--PSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 534 ~~iG~G~~G~Vykg~l~g~~-VAVK~L~~~~~~~--~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
..||.|+||.||+|.++|+. ||||++....... ...|.+|+.+| .+++|||||+|+
T Consensus 47 ~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il-~~l~HpNIV~f~ 105 (362)
T KOG0192|consen 47 EVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLL-SRLRHPNIVQFY 105 (362)
T ss_pred hhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHH-HhCCCCCeeeEE
Confidence 45999999999999999988 9999996533222 56899999999 999999999875
No 19
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=98.30 E-value=4.7e-07 Score=94.95 Aligned_cols=62 Identities=24% Similarity=0.364 Sum_probs=52.0
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCC--CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.+|.....||.|.||.||+|.+. |+.||||.+... .....+-...|+.+| ..|+|||||.|+
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iL-kel~H~nIV~l~ 75 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKIL-KELKHPNIVRLL 75 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHH-HhcCCcceeeEE
Confidence 45666677999999999999997 899999999665 333456678999999 999999999885
No 20
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=98.15 E-value=1.1e-06 Score=89.02 Aligned_cols=57 Identities=28% Similarity=0.252 Sum_probs=46.9
Q ss_pred CCccccccceeEEEEEEc--CeEEEEEEccCC--CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 533 SLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 533 ~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
..++|+|+||.|||+.-+ |..||||++-.. ...-.+.-.+|+..| .+++|||||.|+
T Consensus 7 LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmL-KqLkH~NLVnLi 67 (396)
T KOG0593|consen 7 LGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRML-KQLKHENLVNLI 67 (396)
T ss_pred hhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHH-HhcccchHHHHH
Confidence 458999999999999987 899999999432 222245568999999 999999999875
No 21
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=98.11 E-value=2.5e-06 Score=93.42 Aligned_cols=68 Identities=24% Similarity=0.336 Sum_probs=55.9
Q ss_pred cccccCHHHHHHhhcCCCcCCccccccceeEEEEEEcCeEEEEEEccCCCC--CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 514 FFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSL--QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 514 ~~~~~s~~el~~aT~~F~~~~~iG~G~~G~Vykg~l~g~~VAVK~L~~~~~--~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
..+.+.++++... ..||.|.||+||+|.|.| .||||+|..... ...+.|.+||..+ .+-||-||+.|+
T Consensus 385 ~~WeIp~~ev~l~-------~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~~pt~~qlqaFKnEVa~l-kkTRH~NIlLFM 454 (678)
T KOG0193|consen 385 EEWEIPPEEVLLG-------ERIGSGSFGTVYRGRWHG-DVAVKLLNVDDPTPEQLQAFKNEVAVL-KKTRHENILLFM 454 (678)
T ss_pred cccccCHHHhhcc-------ceeccccccceeeccccc-ceEEEEEecCCCCHHHHHHHHHHHHHH-hhcchhhheeee
Confidence 4567778887654 479999999999999886 799999966433 3467899999999 999999999764
No 22
>cd01984 AANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF). The domain forms a apha/beta/apha fold which binds to Adenosine nucleotide.
Probab=98.08 E-value=1.3e-05 Score=67.32 Aligned_cols=83 Identities=19% Similarity=0.230 Sum_probs=70.4
Q ss_pred EEEeecCChHHHHHHHHHHHHhc-CCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 47 IYVAVAKQVKESKSVLLWALQNS-GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLLIC 125 (591)
Q Consensus 47 IlVAVD~S~~~S~~Al~wAl~~~-~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~~~c 125 (591)
|+||++|+ ..|..++.||.+.. .+..++++|+.
T Consensus 1 ilv~~sgg-~dS~~~l~~~~~~~~~~~~~~~~~~~--------------------------------------------- 34 (86)
T cd01984 1 ILVALSGG-LDSSVLLHLAKRLKSGGPEVVALVVV--------------------------------------------- 34 (86)
T ss_pred CEEEeeCC-HHHHHHHHHHHHHHhcCCCEEEEEeH---------------------------------------------
Confidence 68999999 99999999999875 46677777774
Q ss_pred HHcCCceEEEEEecCChHHHHHHHHHHcCCCEEEEccCCCchhhHHhcc-CCcchHHHHhccCCCccEEEE
Q 007740 126 RQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMD-LKSKKAISVRQQAPASCHIWF 195 (591)
Q Consensus 126 ~~~gV~~e~~vie~~~~~~~Ive~a~~~~idlIVmGs~g~~~~~R~l~G-s~s~Va~~V~~~Ap~~C~V~v 195 (591)
.....+.++++++++|+||+|+++.....+.+.| + ++.++++.++ |+|+.
T Consensus 35 ---------------~~~~~~~~~a~~~~~~~Iv~G~~~~d~~~~~~~~~~---~~~~~~~~~~--~~vl~ 85 (86)
T cd01984 35 ---------------AFVRILKRLAAEEGADVIILGHNADDVAGRRLGASA---NVLVVIKGAG--IPVLT 85 (86)
T ss_pred ---------------HHHHHHHHHHHHcCCCEEEEcCCchhhhhhccCchh---hhhhcccccC--CceeC
Confidence 3456778889999999999999999999988877 6 8899999998 88763
No 23
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=98.03 E-value=3.7e-06 Score=84.94 Aligned_cols=68 Identities=22% Similarity=0.342 Sum_probs=58.1
Q ss_pred HHHHhhcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 522 EIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 522 el~~aT~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|++.+|++|.....||+|+||.||+|... +..|++|.+..........|.+|+.++ .+++||||++++
T Consensus 2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l-~~l~h~~iv~~~ 71 (268)
T cd06624 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALH-SYLKHRNIVQYL 71 (268)
T ss_pred CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHH-HhcCCCCeeeee
Confidence 45678889999999999999999999876 678999998765555567899999999 999999999875
No 24
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=98.00 E-value=3.8e-06 Score=86.33 Aligned_cols=61 Identities=28% Similarity=0.398 Sum_probs=48.4
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCC-C-hhHHHHHHHHHHcCCCCCCcccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-G-PSEFQQEVGAYESFIFHFNLVDS 589 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~-~-~~~F~~Ev~il~s~lrHpNLV~l 589 (591)
++|...|.|++|.||.||+|.-. +..||+|++...... + .-.-.+||.+| .+++|||||.+
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniL-l~~~H~NIV~v 140 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINIL-LKARHPNIVEV 140 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHH-HhcCCCCeeee
Confidence 34556689999999999999876 789999999764321 1 12248999999 99999999975
No 25
>PHA02988 hypothetical protein; Provisional
Probab=98.00 E-value=1e-05 Score=83.07 Aligned_cols=70 Identities=20% Similarity=0.236 Sum_probs=56.5
Q ss_pred ccccCHHHHHHhhcCCCcCCccccccceeEEEEEEcCeEEEEEEccCCCCCC---hhHHHHHHHHHHcCCCCCCccccc
Q 007740 515 FSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG---PSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 515 ~~~~s~~el~~aT~~F~~~~~iG~G~~G~Vykg~l~g~~VAVK~L~~~~~~~---~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.+.++.++| ++.....||+|++|.||+|.+.|..||||.+....... ...|.+|+.+| .+++|||||+++
T Consensus 12 ~~~i~~~~i-----~~~~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l-~~l~h~nIv~~~ 84 (283)
T PHA02988 12 IKCIESDDI-----DKYTSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNL-RRIDSNNILKIY 84 (283)
T ss_pred ceecCHHHc-----CCCCCeEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHH-HhcCCCCEEEEe
Confidence 456677777 33334689999999999999999999999996643333 46788999999 999999999875
No 26
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=98.00 E-value=6.3e-06 Score=89.89 Aligned_cols=57 Identities=30% Similarity=0.515 Sum_probs=51.3
Q ss_pred CCccccccceeEEEEEEcC-eEEEEEEccCCCCCC-hhHHHHHHHHHHcCCCCCCccccc
Q 007740 533 SLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQG-PSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 533 ~~~iG~G~~G~Vykg~l~g-~~VAVK~L~~~~~~~-~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
..+||+|.||.|..+...| +.||||+|++....+ ..+|..|+.+| ++++|||||.|+
T Consensus 543 ~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiL-sqLkhPNIveLv 601 (807)
T KOG1094|consen 543 KEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKIL-SRLKHPNIVELL 601 (807)
T ss_pred hhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHH-hccCCCCeeEEE
Confidence 4679999999999999996 999999999876655 48999999999 999999999885
No 27
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.96 E-value=2.6e-06 Score=83.91 Aligned_cols=62 Identities=23% Similarity=0.431 Sum_probs=52.4
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCC---CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~---~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++|.-...||+|.||.||.|+.+ +-.||+|++... ..+-..++.+|++|- +.++||||++++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIq-s~L~hpnilrlY 88 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQ-SHLRHPNILRLY 88 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEee-cccCCccHHhhh
Confidence 46788899999999999999997 679999999542 233457899999999 999999999875
No 28
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.95 E-value=1.6e-06 Score=98.16 Aligned_cols=57 Identities=23% Similarity=0.384 Sum_probs=49.4
Q ss_pred CCccccccceeEEEEEEcC-------eEEEEEEccCCCCC-ChhHHHHHHHHHHcCCCCCCccccc
Q 007740 533 SLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 533 ~~~iG~G~~G~Vykg~l~g-------~~VAVK~L~~~~~~-~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
...||+|.||.||+|...| +.||||.|+..... ...+|++|++.| +.+.|||||+|+
T Consensus 491 ~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLl-a~l~H~nIVrLl 555 (774)
T KOG1026|consen 491 KEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELL-AELQHPNIVRLL 555 (774)
T ss_pred hhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHH-HhccCCCeEEEE
Confidence 4579999999999998763 67999999765444 678999999999 999999999986
No 29
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=97.93 E-value=7e-06 Score=85.26 Aligned_cols=56 Identities=27% Similarity=0.404 Sum_probs=46.3
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|...+++|.|+||.||+|.+. +..||||+..++... -.+|+.+| .++.|||||+|+
T Consensus 26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im-~~l~HpNIV~L~ 83 (364)
T KOG0658|consen 26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIM-RKLDHPNIVRLL 83 (364)
T ss_pred EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHH-HhcCCcCeeeEE
Confidence 344578999999999999997 689999998665432 24789999 999999999986
No 30
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.87 E-value=8.7e-06 Score=87.59 Aligned_cols=57 Identities=28% Similarity=0.264 Sum_probs=46.6
Q ss_pred CCccccccceeEEEEEEc--CeEEEEEEccCCCC--CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 533 SLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 533 ~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~--~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
..+||+|.||.|||+.-. |..||+|++..+.. ....-..+||.|| .+|.||||++|.
T Consensus 122 i~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~IL-r~l~HpNIikL~ 182 (560)
T KOG0600|consen 122 IEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKIL-RRLDHPNIIKLE 182 (560)
T ss_pred HHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHH-HhcCCCccccee
Confidence 358999999999999864 89999999966542 2233458999999 999999999874
No 31
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=97.87 E-value=4.5e-06 Score=93.67 Aligned_cols=77 Identities=22% Similarity=0.380 Sum_probs=63.3
Q ss_pred CCcccccCHHHHHHhhcCCCc---------CCccccccceeEEEEEEc--C---eEEEEEEccCCC-CCChhHHHHHHHH
Q 007740 512 PQFFSDFSFSEIEGATHNFDP---------SLKIGEGGYGSIYKGLLR--H---MQVAIKMLHPHS-LQGPSEFQQEVGA 576 (591)
Q Consensus 512 ~~~~~~~s~~el~~aT~~F~~---------~~~iG~G~~G~Vykg~l~--g---~~VAVK~L~~~~-~~~~~~F~~Ev~i 576 (591)
......++|++-..|...|.. ..+||.|.||.||+|.|+ | ..||||.|.... .....+|+.|..|
T Consensus 604 k~YiDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsI 683 (996)
T KOG0196|consen 604 KTYIDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASI 683 (996)
T ss_pred eeecCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhh
Confidence 345677889888888777743 578999999999999996 4 689999997643 3446789999999
Q ss_pred HHcCCCCCCcccc
Q 007740 577 YESFIFHFNLVDS 589 (591)
Q Consensus 577 l~s~lrHpNLV~l 589 (591)
| ++..||||+.|
T Consensus 684 M-GQFdHPNIIrL 695 (996)
T KOG0196|consen 684 M-GQFDHPNIIRL 695 (996)
T ss_pred c-ccCCCCcEEEE
Confidence 9 99999999987
No 32
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=97.84 E-value=1.1e-05 Score=87.22 Aligned_cols=67 Identities=22% Similarity=0.376 Sum_probs=55.7
Q ss_pred ccccCHHHHHHhhcCCCcCCccccccceeEEEEEEcCe-EEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 515 FSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHM-QVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 515 ~~~~s~~el~~aT~~F~~~~~iG~G~~G~Vykg~l~g~-~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.+.+..+++... +.||+|-||.||.|.++|. .||||.+..... ....|.+|+.+| .+++|+|||+|+
T Consensus 200 ~wei~r~~l~l~-------~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m-~~~~f~~Ea~iM-k~L~H~~lV~l~ 267 (468)
T KOG0197|consen 200 PWEIPREELKLI-------RELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM-SPEAFLREAQIM-KKLRHEKLVKLY 267 (468)
T ss_pred CeeecHHHHHHH-------HHhcCCccceEEEEEEcCCCcccceEEecccc-ChhHHHHHHHHH-HhCcccCeEEEE
Confidence 456666666554 4799999999999999964 999999977533 357899999999 999999999986
No 33
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=97.83 E-value=9.3e-06 Score=88.32 Aligned_cols=61 Identities=30% Similarity=0.456 Sum_probs=49.0
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC--CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~--~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||+|+||.||||+-. +..||+|.+..... ...+...+||+|+ .+++|||||.++
T Consensus 3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~-r~lkHpniv~m~ 67 (808)
T KOG0597|consen 3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRIL-RSLKHPNIVEML 67 (808)
T ss_pred chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHH-HhcCCcchhhHH
Confidence 3444457999999999999876 57899999966432 3356689999999 999999999875
No 34
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=97.83 E-value=3.9e-05 Score=86.74 Aligned_cols=57 Identities=30% Similarity=0.443 Sum_probs=48.6
Q ss_pred CCccccccceeEEEEEEc--C----eEEEEEEccCC-CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 533 SLKIGEGGYGSIYKGLLR--H----MQVAIKMLHPH-SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 533 ~~~iG~G~~G~Vykg~l~--g----~~VAVK~L~~~-~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
..+||.|.||+||||.+- | .+||||++... +.....+|..|+-+| +++.||||++||
T Consensus 701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~m-asldHpnl~RLL 764 (1177)
T KOG1025|consen 701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRM-ASLDHPNLLRLL 764 (1177)
T ss_pred hceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHH-hcCCCchHHHHh
Confidence 468999999999999873 3 68999999654 444567899999999 999999999986
No 35
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=97.81 E-value=8.8e-06 Score=89.10 Aligned_cols=61 Identities=31% Similarity=0.544 Sum_probs=53.0
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.++...++||-|.||.||.|.|. ..+||||.|..+.. ..++|+.|..+| .-|.|||||+|+
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvM-KeikHpNLVqLL 329 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVM-KEIKHPNLVQLL 329 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHH-HhhcCccHHHHh
Confidence 34566789999999999999998 58999999976544 468999999999 999999999986
No 36
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=97.80 E-value=1.6e-05 Score=86.95 Aligned_cols=57 Identities=32% Similarity=0.511 Sum_probs=47.1
Q ss_pred CCccccccceeEEEEEEc---C---eEEEEEEccCCC---CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 533 SLKIGEGGYGSIYKGLLR---H---MQVAIKMLHPHS---LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 533 ~~~iG~G~~G~Vykg~l~---g---~~VAVK~L~~~~---~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
..+||+|.||.||+|.+. + ..||||...... .....+|.+|.++| .+++|||||+|+
T Consensus 162 ~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvM-r~l~H~NVVr~y 227 (474)
T KOG0194|consen 162 GKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVM-RQLNHPNVVRFY 227 (474)
T ss_pred cceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHH-HhCCCCCEEEEE
Confidence 469999999999999986 2 238999986422 33467899999999 999999999986
No 37
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=97.76 E-value=2.4e-05 Score=87.02 Aligned_cols=56 Identities=27% Similarity=0.427 Sum_probs=49.0
Q ss_pred CccccccceeEEEEEEc---C--eEEEEEEccCCCCC-ChhHHHHHHHHHHcCCCCCCccccc
Q 007740 534 LKIGEGGYGSIYKGLLR---H--MQVAIKMLHPHSLQ-GPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 534 ~~iG~G~~G~Vykg~l~---g--~~VAVK~L~~~~~~-~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.+||+|.||.|++|.|. | -.||||+|..+... ...+|++|+.+| -+++||||++|+
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M-~~L~H~hliRLy 177 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHM-LKLQHPHLIRLY 177 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHH-HhccCcceeEEe
Confidence 37999999999999996 4 47899999876554 578899999999 999999999986
No 38
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=97.75 E-value=3e-05 Score=77.66 Aligned_cols=57 Identities=28% Similarity=0.385 Sum_probs=46.4
Q ss_pred CCccccccceeEEEEEEc--CeEEEEEEccCCCC-CC-hhHHHHHHHHHHcCCCCCCccccc
Q 007740 533 SLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QG-PSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 533 ~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~-~~-~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
..+||+|.||.||+|+-. |+.||||++..... .+ ...-.+|+..| ..++||||+.|+
T Consensus 7 ~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~L-qel~h~nIi~Li 67 (318)
T KOG0659|consen 7 LEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLL-QELKHPNIIELI 67 (318)
T ss_pred hhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHH-HHccCcchhhhh
Confidence 457999999999999875 89999999965422 22 23468999999 999999999875
No 39
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.69 E-value=1.2e-05 Score=94.23 Aligned_cols=64 Identities=27% Similarity=0.318 Sum_probs=50.5
Q ss_pred hhcCCCcCCccccccceeEEEEE--EcCeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 526 ATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 526 aT~~F~~~~~iG~G~~G~Vykg~--l~g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
...+|.+...||+||||.|||.. ++|+.+|||++.-.. ........+||..| ++++|||+|+++
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~L-ArLnHpNVVRYy 543 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLL-ARLNHPNVVRYY 543 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHH-hhcCCcceeeee
Confidence 34567777899999999999986 459999999995432 22234467899999 999999999875
No 40
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=97.69 E-value=1.5e-05 Score=88.98 Aligned_cols=57 Identities=26% Similarity=0.503 Sum_probs=49.2
Q ss_pred CCccccccceeEEEEEEc--CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 533 SLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 533 ~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
...||+||||.||+|.-+ |..||||.++..+ ....+.+.+|+++| .+++|||||+++
T Consensus 18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~Eieil-kKLnh~NIVk~f 77 (732)
T KOG4250|consen 18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEIL-KKLNHPNIVKLF 77 (732)
T ss_pred hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHH-HHcCchhhhhhc
Confidence 457999999999999976 9999999997743 34467789999999 999999999875
No 41
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=97.67 E-value=4.5e-05 Score=80.71 Aligned_cols=75 Identities=19% Similarity=0.267 Sum_probs=61.0
Q ss_pred ccccCHHHHHHhhcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCC--CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 515 FSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 515 ~~~~s~~el~~aT~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++.....++...+++|.....||+|+||.||+|... |..||||++... .......+.+|+.++ .+++||||++++
T Consensus 4 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l-~~l~h~~iv~~~ 82 (345)
T cd07877 4 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL-KHMKHENVIGLL 82 (345)
T ss_pred chhhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHH-HHcCCCccccee
Confidence 455566778888899998899999999999999864 789999998642 222345688999999 999999999864
No 42
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=97.65 E-value=4.5e-05 Score=80.49 Aligned_cols=59 Identities=24% Similarity=0.287 Sum_probs=47.0
Q ss_pred CcCCccccccceeEEEEEEc--CeEEEEEEccCCCCC-------ChhHHHHHHHHHHcCCCCCCccccc
Q 007740 531 DPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-------GPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 531 ~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~-------~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
-....||.|+||.|-.+.-. |..||||+++..... ......+|++|| .+++|||||++.
T Consensus 175 ii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieIL-kkL~HP~IV~~~ 242 (475)
T KOG0615|consen 175 IISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEIL-KKLSHPNIVRIK 242 (475)
T ss_pred EeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHH-HhcCCCCEEEEe
Confidence 34678999999999999886 899999999663211 122347999999 999999999874
No 43
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.64 E-value=5.3e-05 Score=83.33 Aligned_cols=60 Identities=18% Similarity=0.296 Sum_probs=50.6
Q ss_pred CCcCCccccccceeEEEEEE-c-CeEEEEEEccCC---CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLL-R-HMQVAIKMLHPH---SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l-~-g~~VAVK~L~~~---~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|...+.||+|||+.||.+.- . |..||+|++... .....+...+||+|- +.|.|||||+|+
T Consensus 20 Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIH-r~L~HpnIV~f~ 84 (592)
T KOG0575|consen 20 YKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIH-RSLKHPNIVQFY 84 (592)
T ss_pred eeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHH-HhcCCCcEEeee
Confidence 55678899999999999987 4 899999999653 233456789999999 999999999985
No 44
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=97.63 E-value=6.5e-05 Score=80.26 Aligned_cols=61 Identities=21% Similarity=0.344 Sum_probs=50.0
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCC--CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||++... |..||||++... .......+.+|+.++ ..++||||++++
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~ 65 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKML-CFFKHDNVLSAL 65 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHH-HhCCCCCcCCHh
Confidence 4677889999999999999864 899999998542 222346789999999 999999999764
No 45
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=97.62 E-value=5.1e-05 Score=78.98 Aligned_cols=61 Identities=25% Similarity=0.358 Sum_probs=49.4
Q ss_pred CCCcCCccccccceeEEEEEEc--Ce----EEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HM----QVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~----~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|...+.||+|+||.||+|.+. |. .||||.+.... ......|.+|+.++ ..+.||||++++
T Consensus 8 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~ 75 (316)
T cd05108 8 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM-ASVDNPHVCRLL 75 (316)
T ss_pred hceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHH-HhCCCCCCCeEE
Confidence 4777789999999999999874 33 48999996532 23356799999999 999999999875
No 46
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.61 E-value=3.2e-05 Score=82.17 Aligned_cols=58 Identities=22% Similarity=0.453 Sum_probs=45.2
Q ss_pred CCcCCccccccceeEEEEEEcCeEEEEEEccCCCCCChhHHHHHHHHHHc-CCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEVGAYES-FIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~g~~VAVK~L~~~~~~~~~~F~~Ev~il~s-~lrHpNLV~li 590 (591)
......||+|.||.||+|.++|..||||+|... ....|.+|-+|-+. -|||+||+.||
T Consensus 213 I~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFI 271 (513)
T KOG2052|consen 213 IVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFI 271 (513)
T ss_pred eEEEEEecCccccceeeccccCCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhh
Confidence 344568999999999999999999999999653 23456667666522 46999999886
No 47
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=97.61 E-value=4.5e-05 Score=89.60 Aligned_cols=57 Identities=33% Similarity=0.430 Sum_probs=48.9
Q ss_pred CCccccccceeEEEEEEc---C----eEEEEEEccCC-CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 533 SLKIGEGGYGSIYKGLLR---H----MQVAIKMLHPH-SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 533 ~~~iG~G~~G~Vykg~l~---g----~~VAVK~L~~~-~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
...||.|.||.||.|.+. | ..||||.|... +.+...+|.+|..+| +++.|||||+||
T Consensus 697 ~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m-~~f~HpNiv~li 761 (1025)
T KOG1095|consen 697 LRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLM-SKFDHPNIVSLI 761 (1025)
T ss_pred eeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHH-hcCCCcceeeEE
Confidence 468999999999999986 3 34999999764 445678899999999 999999999986
No 48
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=97.58 E-value=7.4e-05 Score=77.13 Aligned_cols=61 Identities=25% Similarity=0.361 Sum_probs=47.8
Q ss_pred CCCcCCccccccceeEEEEEEc------------------CeEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCcccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR------------------HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDS 589 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~------------------g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~l 589 (591)
.|....+||+|+||.||++.+. +..||||.+..... .....|.+|+.++ .+++|||||++
T Consensus 6 ~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~ 84 (304)
T cd05096 6 HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKIL-SRLKDPNIIRL 84 (304)
T ss_pred hCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHH-hhcCCCCeeEE
Confidence 3445678999999999999753 24699999976432 2345799999999 99999999987
Q ss_pred c
Q 007740 590 F 590 (591)
Q Consensus 590 i 590 (591)
+
T Consensus 85 ~ 85 (304)
T cd05096 85 L 85 (304)
T ss_pred E
Confidence 4
No 49
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=97.57 E-value=6.6e-05 Score=81.14 Aligned_cols=59 Identities=25% Similarity=0.454 Sum_probs=50.1
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCC--CCCChhHHHHHHHHHHcCCCCCCcccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEVGAYESFIFHFNLVDS 589 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~lrHpNLV~l 589 (591)
-|. +.+||.|.||+||-|..+ |+.||||+++.. ......++.+||.|| .+++||.||.|
T Consensus 566 if~-devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaIL-q~l~HPGiV~l 628 (888)
T KOG4236|consen 566 IFA-DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAIL-QNLHHPGIVNL 628 (888)
T ss_pred hhh-HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHH-HhcCCCCeeEE
Confidence 344 468999999999999997 899999999763 334567899999999 99999999976
No 50
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=97.57 E-value=4e-05 Score=77.43 Aligned_cols=56 Identities=32% Similarity=0.592 Sum_probs=46.7
Q ss_pred CccccccceeEEEEEEc------CeEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 534 LKIGEGGYGSIYKGLLR------HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 534 ~~iG~G~~G~Vykg~l~------g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
..||.|.||.||+|.+. +..|+||.+..... .....|.+|+..+ .+++||||++++
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l-~~l~h~ni~~~~ 67 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQIL-RKLRHPNIVKLY 67 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHH-HTHSBTTBE-EE
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccc-cccccccccccc
Confidence 47999999999999998 58999999965332 2367899999999 999999999875
No 51
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=97.57 E-value=8.2e-05 Score=74.44 Aligned_cols=60 Identities=28% Similarity=0.429 Sum_probs=51.5
Q ss_pred CCCcCCccccccceeEEEEEEcCeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||++...|..||||.+..... ....|.+|+.++ .+++||||++++
T Consensus 7 ~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l-~~l~~~~i~~~~ 66 (256)
T cd05039 7 ELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDST-AAQAFLAEASVM-TTLRHPNLVQLL 66 (256)
T ss_pred hccceeeeecCCCceEEEEEecCcEEEEEEeccchh-HHHHHHHHHHHH-HhcCCcceeeeE
Confidence 455567899999999999999999999999965433 467899999999 999999999865
No 52
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=97.56 E-value=7.5e-05 Score=76.04 Aligned_cols=61 Identities=21% Similarity=0.293 Sum_probs=49.9
Q ss_pred CCCcCCccccccceeEEEEEEc------CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~------g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||+|+||.||++.+. +..||||.+..........|.+|+.++ .+++|||||+++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l-~~l~h~~iv~~~ 71 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEIL-KSLQHDNIVKYK 71 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHH-HhCCCCCeeEEE
Confidence 3455568999999999999752 578999999765544466899999999 999999999863
No 53
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=97.56 E-value=7.8e-05 Score=75.42 Aligned_cols=61 Identities=23% Similarity=0.321 Sum_probs=48.9
Q ss_pred CCCcCCccccccceeEEEEEEc-----CeEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~-----g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||+|+||.||+|.+. +..||+|++..... .....|.+|+.++ .+++|||||+++
T Consensus 6 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l-~~l~h~~iv~~~ 72 (266)
T cd05064 6 SIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTL-GQFDHSNIVRLE 72 (266)
T ss_pred HeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHH-hcCCCCCcCeEE
Confidence 3555678999999999999864 46899999975432 2245799999999 999999999864
No 54
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=97.55 E-value=0.0001 Score=75.56 Aligned_cols=61 Identities=26% Similarity=0.370 Sum_probs=49.4
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|....+||.|+||.||+|... +..||+|.+.... ......+.+|+.++ .+++||||++++
T Consensus 6 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~ 69 (288)
T cd07871 6 TYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLL-KNLKHANIVTLH 69 (288)
T ss_pred cceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHH-HhCCCCCEeeEE
Confidence 4555678999999999999876 6899999986432 22345688999999 999999999864
No 55
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=97.55 E-value=0.00012 Score=77.20 Aligned_cols=71 Identities=21% Similarity=0.283 Sum_probs=54.7
Q ss_pred CHHHHHHhh----cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCC--CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 519 SFSEIEGAT----HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 519 s~~el~~aT----~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+..++..++ ++|.....||.|+||.||+|... |..||||++... .......|.+|+.++ .+++||||++++
T Consensus 2 ~~~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~ 80 (342)
T cd07879 2 YREEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLL-KHMQHENVIGLL 80 (342)
T ss_pred chhhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHH-HhcCCCCccchh
Confidence 444555554 66777789999999999999875 789999998542 122235688999999 999999999764
No 56
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.55 E-value=1.5e-05 Score=80.26 Aligned_cols=57 Identities=25% Similarity=0.382 Sum_probs=46.4
Q ss_pred CCccccccceeEEEEEE--cCeEEEEEEccCCCC--CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 533 SLKIGEGGYGSIYKGLL--RHMQVAIKMLHPHSL--QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 533 ~~~iG~G~~G~Vykg~l--~g~~VAVK~L~~~~~--~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
..+||.|.||.|||..- .|..||.|.++-... ....++..|+.+| .+++|||||+++
T Consensus 24 l~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lL-kQL~HpNIVqYy 84 (375)
T KOG0591|consen 24 LKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLL-KQLNHPNIVQYY 84 (375)
T ss_pred HHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHH-HhcCCchHHHHH
Confidence 35799999999999854 389999999974332 2346689999999 999999999764
No 57
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=97.53 E-value=0.00012 Score=75.56 Aligned_cols=62 Identities=26% Similarity=0.373 Sum_probs=50.4
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++|.....||.|+||.||+|... |..||||++.... ......+.+|+.++ ..++|||||+++
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~ 69 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLL-KGLKHANIVLLH 69 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHH-hhCCCCCcCeEE
Confidence 45777789999999999999885 7899999986432 22335678999999 999999999764
No 58
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=97.53 E-value=3.6e-05 Score=82.41 Aligned_cols=54 Identities=30% Similarity=0.464 Sum_probs=44.1
Q ss_pred CccccccceeEEEEEEcCeEEEEEEccCCCCCChhHHHHHHHHHH-cCCCCCCccccc
Q 007740 534 LKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEVGAYE-SFIFHFNLVDSF 590 (591)
Q Consensus 534 ~~iG~G~~G~Vykg~l~g~~VAVK~L~~~~~~~~~~F~~Ev~il~-s~lrHpNLV~li 590 (591)
.+||+|.||.||||.+.+..||||++.. +....|++|=+|.. -.+.|+||++||
T Consensus 216 eli~~Grfg~V~KaqL~~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi 270 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQLDNRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFI 270 (534)
T ss_pred HHhhcCccceeehhhccCceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhh
Confidence 4689999999999999999999999954 33456887765540 478999999986
No 59
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=97.53 E-value=8.5e-05 Score=78.77 Aligned_cols=56 Identities=23% Similarity=0.293 Sum_probs=46.5
Q ss_pred CccccccceeEEEEEEc--CeEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 534 ~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.+||.|+||.||++... |..||||++..... .....|.+|+.++ .+++|||||+++
T Consensus 80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l-~~l~h~~iv~~~ 138 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEIL-RDVNHPNVVKCH 138 (353)
T ss_pred hhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHH-HhCCCCCcceee
Confidence 47999999999999886 78999999954322 2246789999999 999999999864
No 60
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=97.52 E-value=0.00011 Score=78.70 Aligned_cols=63 Identities=21% Similarity=0.272 Sum_probs=50.3
Q ss_pred hcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC--C------------CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--L------------QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 527 T~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~------------~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.+.|.....||.|.||.|-.+.-. +..||||+|+... . ...+...+||.|| .+++|||||+|+
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIail-Kkl~H~nVV~Li 174 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAIL-KKLHHPNVVKLI 174 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHH-HhcCCcCeeEEE
Confidence 355666778999999999988765 8999999995421 0 1135789999999 999999999986
No 61
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=97.52 E-value=7.9e-05 Score=79.95 Aligned_cols=62 Identities=26% Similarity=0.503 Sum_probs=49.1
Q ss_pred cCCCcCCccccccceeEEEEEEc-------CeEEEEEEccCCC-CCChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~-------g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
++|.....||.|+||.||+|... +..||||++.... ......|.+|+.++ ..+ +|||||+++
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il-~~l~~HpnIv~l~ 105 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVL-SYLGNHINIVNLL 105 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHH-HHhcCCcceeeee
Confidence 35666789999999999999742 4689999996533 23346789999999 989 899999874
No 62
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.51 E-value=0.00014 Score=73.28 Aligned_cols=61 Identities=26% Similarity=0.345 Sum_probs=50.3
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||+|+||.||+|... |..||+|++..........+.+|+.++ .+++||||++++
T Consensus 10 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l-~~~~h~~ii~~~ 72 (267)
T cd06646 10 DYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMV-KECKHCNIVAYF 72 (267)
T ss_pred hcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHH-HhcCCCCeeeee
Confidence 4555678999999999999974 789999999654444456788999999 999999999864
No 63
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=97.50 E-value=0.0001 Score=74.32 Aligned_cols=62 Identities=26% Similarity=0.349 Sum_probs=50.2
Q ss_pred cCCCcCCccccccceeEEEEEEc-----CeEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~-----g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++|.....||+|+||.||+|.+. ...||||.+..... .....|..|+.++ .+++||||++++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 71 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIM-GQFDHPNIIRLE 71 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHH-HhCCCCCcceEe
Confidence 45777889999999999999985 24799999865432 2346799999999 999999999864
No 64
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=97.50 E-value=8.6e-05 Score=76.39 Aligned_cols=61 Identities=16% Similarity=0.227 Sum_probs=49.6
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC---CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~---~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||++... |..||||++.... ......|.+|+.++ .+++||||++++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l-~~l~hp~iv~~~ 67 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVL-KEVSHPFIIRLF 67 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHH-HhCCCCcHhhhH
Confidence 4666678999999999999886 7899999985421 22345688999999 999999999864
No 65
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=97.49 E-value=0.0001 Score=77.03 Aligned_cols=60 Identities=20% Similarity=0.350 Sum_probs=48.2
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCC--CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|....+||+|+||.||+|... |..||||++... .......|.+|+.++ .+++|||||+++
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l-~~l~hpniv~~~ 65 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLL-RLLRHPDIVEIK 65 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHH-HhCCCCCEeeec
Confidence 444568999999999999875 789999998642 223345689999999 999999999763
No 66
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=97.49 E-value=7.9e-05 Score=78.26 Aligned_cols=61 Identities=20% Similarity=0.270 Sum_probs=49.8
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCC---CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~---~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||+|... |..||||.+... .......|.+|+.++ .+++|||||+++
T Consensus 19 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l-~~l~hp~iv~~~ 84 (329)
T PTZ00263 19 DFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSIL-MELSHPFIVNMM 84 (329)
T ss_pred heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHH-HhCCCCCCCcEE
Confidence 4555678999999999999986 789999998542 223346789999999 999999999875
No 67
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=97.49 E-value=9.7e-05 Score=80.20 Aligned_cols=62 Identities=24% Similarity=0.438 Sum_probs=48.7
Q ss_pred cCCCcCCccccccceeEEEEEEc-------CeEEEEEEccCCCC-CChhHHHHHHHHHHcCCC-CCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFIF-HFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~-------g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lr-HpNLV~li 590 (591)
+.|....+||.|+||.||+|... +..||||++..... .....|.+|+.++ .++. |||||+++
T Consensus 37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l-~~l~~HpnIv~l~ 107 (400)
T cd05105 37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIM-THLGPHLNIVNLL 107 (400)
T ss_pred cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHH-HhcCCCCCeeeEE
Confidence 34555678999999999999864 24699999965432 2346799999999 9995 99999875
No 68
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=97.47 E-value=0.00016 Score=73.80 Aligned_cols=61 Identities=23% Similarity=0.254 Sum_probs=49.9
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCC--CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||++... +..||||++... .......|.+|+.++ .+++||||++++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~~iv~~~ 66 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKML-RTLKQENIVELK 66 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHH-HhCCCccccchh
Confidence 4666778999999999999986 688999998543 223346788999999 999999999864
No 69
>PRK09188 serine/threonine protein kinase; Provisional
Probab=97.47 E-value=0.00012 Score=78.49 Aligned_cols=63 Identities=10% Similarity=0.105 Sum_probs=49.6
Q ss_pred HhhcCCCcCCccccccceeEEEEEEc---CeEEEEEEccCCC-----CCChhHHHHHHHHHHcCCCCCCccc
Q 007740 525 GATHNFDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHS-----LQGPSEFQQEVGAYESFIFHFNLVD 588 (591)
Q Consensus 525 ~aT~~F~~~~~iG~G~~G~Vykg~l~---g~~VAVK~L~~~~-----~~~~~~F~~Ev~il~s~lrHpNLV~ 588 (591)
..-.+|.....||+|+||.||+|... |..||||++.... ......|.+|+.+| .+++|+|+|.
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL-~~L~h~~iv~ 85 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRAL-KTVRGIGVVP 85 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHH-HhccCCCCCc
Confidence 34456888889999999999999874 6778999875321 11245699999999 9999999985
No 70
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=97.46 E-value=0.00015 Score=75.09 Aligned_cols=61 Identities=26% Similarity=0.364 Sum_probs=49.1
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||+|+||.||+|... +..||||.+.... ......+.+|+.++ .+++||||++++
T Consensus 7 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l-~~l~h~~iv~~~ 70 (309)
T cd07872 7 TYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLL-KDLKHANIVTLH 70 (309)
T ss_pred ceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHH-HhCCCCCcceEE
Confidence 3555678999999999999876 6889999986433 22345688999999 999999999874
No 71
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=97.46 E-value=8.2e-05 Score=79.05 Aligned_cols=62 Identities=16% Similarity=0.174 Sum_probs=50.3
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC---CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~---~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++|.....||.|+||.||++... |+.||||++.... ......|.+|+.++ ..++||||++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il-~~l~h~~iv~~~ 67 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDIL-AEADNPWVVKLY 67 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHH-HhCCCCCCcceE
Confidence 35777789999999999999885 7899999995421 22345688999999 999999999874
No 72
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=97.46 E-value=0.00013 Score=79.20 Aligned_cols=62 Identities=24% Similarity=0.415 Sum_probs=48.7
Q ss_pred cCCCcCCccccccceeEEEEEEcC-------eEEEEEEccCCCCC-ChhHHHHHHHHHHcCCC-CCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEVGAYESFIF-HFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~g-------~~VAVK~L~~~~~~-~~~~F~~Ev~il~s~lr-HpNLV~li 590 (591)
++|.....||+|+||.||+|.+.+ ..||||++...... ....|.+|+.+| .++. |||||+++
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l-~~l~~H~niv~~~ 107 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIM-SHLGPHLNIVNLL 107 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHH-HhcCCCCCeEEEE
Confidence 345556789999999999998753 57999999654222 235689999999 9997 99999874
No 73
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=97.45 E-value=0.00019 Score=72.90 Aligned_cols=61 Identities=33% Similarity=0.430 Sum_probs=49.9
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
||.....||.|+||.||+|... |..||||.+.... ......|.+|+.++ .+++||||++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l-~~l~h~~i~~~~ 65 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL-KELNHPNIVKLL 65 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHH-HhcCCCCCcchh
Confidence 4666788999999999999885 7899999986432 22335789999999 999999999874
No 74
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=97.45 E-value=0.00014 Score=73.10 Aligned_cols=61 Identities=26% Similarity=0.515 Sum_probs=50.6
Q ss_pred cCCCcCCccccccceeEEEEEEc-CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~-g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.+|.....||.|+||.||+|... +..||||.+.... .....|.+|+.++ .+++||||++++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l-~~l~h~~i~~~~ 67 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIM-KKLRHPKLIQLY 67 (261)
T ss_pred hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHH-HHCCCCCcccee
Confidence 44666779999999999999986 6789999986543 3357799999999 999999999764
No 75
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=97.45 E-value=9.8e-05 Score=79.26 Aligned_cols=61 Identities=16% Similarity=0.153 Sum_probs=49.9
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC---CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~---~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||+|+||.||++... |..||||++.... ......|.+|+.++ .+++|||||+++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il-~~l~h~~iv~l~ 67 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDIL-AEADNEWVVKLY 67 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHH-HhcCCCCeeeeE
Confidence 4666778999999999999886 6899999996432 22345689999999 999999999875
No 76
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=97.45 E-value=6.9e-05 Score=78.68 Aligned_cols=62 Identities=21% Similarity=0.320 Sum_probs=48.5
Q ss_pred cCCCcCCccccccceeEEEEEEc-------CeEEEEEEccCCCC-CChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~-------g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
++|....+||.|+||.||+|... +..||||++..... .....|.+|+.++ .++ +|||||+++
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l-~~l~~h~niv~~~ 77 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKIL-IHIGNHLNVVNLL 77 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHH-HHhccCcceeeEE
Confidence 34566678999999999999752 36799999965332 2245689999999 999 899999875
No 77
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=97.45 E-value=0.00011 Score=75.31 Aligned_cols=60 Identities=20% Similarity=0.202 Sum_probs=48.6
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCC---CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~---~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||+|+||.||++... |..||||.+.... ......|.+|+.++ .+++||||+.++
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il-~~l~~~~iv~~~ 66 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRIL-EKVNSRFVVSLA 66 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHH-HhcCCCcEEEEE
Confidence 555678999999999999875 7899999986432 22345688999999 999999999764
No 78
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=97.43 E-value=0.0012 Score=71.93 Aligned_cols=64 Identities=16% Similarity=0.206 Sum_probs=51.6
Q ss_pred hhcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCC---ChhHHHHHHHHHHcCCCCCCccccc
Q 007740 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 526 aT~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~---~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
..++|.....||+|+||.||.+.-+ |..+|+|+|...... ...-...|=.+| .-..+|+||+|+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL-~~~ds~~vVKLy 207 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDIL-AEVDSPWVVKLY 207 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHh-hhcCCCcEEEEE
Confidence 3456777779999999999999876 889999999764332 234567888999 889999999986
No 79
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=97.43 E-value=0.00022 Score=71.75 Aligned_cols=62 Identities=21% Similarity=0.384 Sum_probs=49.9
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC---CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~---~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++|.....||.|+||.||+|... |..||||.+..... .....|.+|+.++ .+++||||++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 68 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLL-KQLNHPNVIKYL 68 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHH-HhCCCcceeeee
Confidence 35666778999999999999875 78999998854222 2235689999999 999999999864
No 80
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=97.42 E-value=0.00017 Score=72.43 Aligned_cols=60 Identities=30% Similarity=0.498 Sum_probs=49.6
Q ss_pred CCCcCCccccccceeEEEEEEc-CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~-g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|....+||.|+||.||++... +..||+|.+.... .....|.+|+.++ .+++|||+++++
T Consensus 7 ~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l-~~l~h~~i~~~~ 67 (260)
T cd05067 7 TLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLM-KQLQHPRLVRLY 67 (260)
T ss_pred HceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHH-HhcCCcCeeeEE
Confidence 3455678999999999999986 7899999986533 3457899999999 999999998763
No 81
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=97.42 E-value=0.00012 Score=69.54 Aligned_cols=60 Identities=33% Similarity=0.436 Sum_probs=48.1
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCC--CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++.-.+||+|.||+||||.-+ +..||+|..+-+ ...-...-.+|+-+| ..+.|.|||+|+
T Consensus 4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicll-kelkhknivrl~ 67 (292)
T KOG0662|consen 4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLL-KELKHKNIVRLH 67 (292)
T ss_pred hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHH-HHhhhcceeehh
Confidence 344458999999999999876 789999988543 223356678999999 999999999875
No 82
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=97.41 E-value=0.00016 Score=72.43 Aligned_cols=59 Identities=24% Similarity=0.387 Sum_probs=48.4
Q ss_pred CCcCCccccccceeEEEEEEc-CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~-g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||+|+||.||++.+. +..+|+|.+... ......|.+|+.++ .+++||||++++
T Consensus 6 ~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l-~~l~h~~i~~~~ 65 (256)
T cd05114 6 LTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVM-MKLSHPKLVQLY 65 (256)
T ss_pred cEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHH-HHCCCCCceeEE
Confidence 455568999999999999987 568999988543 23356899999999 999999999864
No 83
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=97.40 E-value=0.0001 Score=73.89 Aligned_cols=62 Identities=34% Similarity=0.613 Sum_probs=52.1
Q ss_pred cCCCcCCccccccceeEEEEEEc-CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~-g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.+|....+||.|+||.||+|... +..||+|.+..........|..|+.++ ..++||||++++
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~ 68 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQAL-KRLRHKHLISLF 68 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHH-hcCCCcchhhee
Confidence 34555678999999999999987 689999999765554567899999999 999999999864
No 84
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=97.39 E-value=0.00013 Score=73.58 Aligned_cols=64 Identities=25% Similarity=0.373 Sum_probs=51.8
Q ss_pred HhhcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 525 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 525 ~aT~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
.+++.|.....||.|+||.||+|... +..||||.+... ......+.+|+.++ .++ +||||++++
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l-~~~~~h~~i~~~~ 69 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINML-KKYSHHRNIATYY 69 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC-CccHHHHHHHHHHH-HHhcCCCCeeeEe
Confidence 45666777788999999999999886 689999998543 23456789999999 888 799999764
No 85
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=97.39 E-value=0.00019 Score=72.42 Aligned_cols=59 Identities=25% Similarity=0.380 Sum_probs=47.3
Q ss_pred CcCCccccccceeEEEEEEc-----CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 531 DPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 531 ~~~~~iG~G~~G~Vykg~l~-----g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.....||+|+||.||+|.+. |..||||.+.... ......|.+|+.++ .+++||||++++
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~~i~~~~ 67 (273)
T cd05074 2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACM-KEFDHPNVIKLI 67 (273)
T ss_pred cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHH-hcCCCCCcceEE
Confidence 33568999999999999873 4789999996532 22356789999999 999999999864
No 86
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=97.39 E-value=0.0002 Score=75.44 Aligned_cols=62 Identities=21% Similarity=0.309 Sum_probs=49.3
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+.|.....||.|+||.||++... +..||||.+.... ......|.+|+.++ .+++||||++++
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~~iv~~~ 80 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLL-KHMKHENVIGLL 80 (343)
T ss_pred hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHH-HhcCCCchhhhh
Confidence 44556678999999999999875 6899999986432 22345688999999 999999999864
No 87
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.38 E-value=0.00018 Score=75.70 Aligned_cols=62 Identities=16% Similarity=0.222 Sum_probs=50.8
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++|....+||.|+||.||++... |..||+|.+..... .....|.+|+.++ .+++|||||+++
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l-~~l~h~~iv~~~ 69 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVL-HECNSPYIVGFY 69 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHH-HHCCCCccccee
Confidence 45777789999999999999886 68899998865322 2245689999999 999999999874
No 88
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=97.38 E-value=0.00019 Score=72.09 Aligned_cols=60 Identities=25% Similarity=0.459 Sum_probs=49.6
Q ss_pred CCCcCCccccccceeEEEEEEc-CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~-g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|....+||+|+||.||+|... +..||+|.+.... .....|.+|+.++ .+++||||++++
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l-~~l~h~~i~~~~ 67 (261)
T cd05072 7 SIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLM-KTLQHDKLVRLY 67 (261)
T ss_pred HeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHH-HhCCCCCeeeEE
Confidence 4555678999999999999986 6789999986532 2357899999999 999999999864
No 89
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=97.38 E-value=0.00015 Score=76.16 Aligned_cols=68 Identities=16% Similarity=0.164 Sum_probs=55.0
Q ss_pred HHHHhhcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCC--CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 522 EIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 522 el~~aT~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++..++++|.....||.|+||.||++... |..||||.+... .......+.+|+.++ .+++|||||+++
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l-~~l~hpniv~~~ 75 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLL-KHLRHENIISLS 75 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHH-HhcCCCCeeeEe
Confidence 44557788888899999999999999865 789999988542 222346788999999 999999999864
No 90
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=97.38 E-value=0.00018 Score=75.54 Aligned_cols=63 Identities=22% Similarity=0.304 Sum_probs=51.4
Q ss_pred hcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 527 T~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+++|.....||+|+||.||+|... |..||||.+.... ......+.+|+.++ .+++|||||+++
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~ 69 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKIL-RRFKHENIIGIL 69 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHH-HhCCCCCcCchh
Confidence 456777789999999999999875 7899999986432 22345688999999 999999999864
No 91
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=97.37 E-value=0.00027 Score=72.48 Aligned_cols=64 Identities=28% Similarity=0.333 Sum_probs=52.2
Q ss_pred hhcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 526 aT~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+.++|.....||.|+||.||+|... |..||||.+.... ......+.+|+.++ .+++||||++++
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~-~~l~h~~i~~~~ 72 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKIL-RQLNHRNIVNLK 72 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHH-HhCCCCCeeeee
Confidence 4567778889999999999999986 7899999996532 22335678999999 999999999863
No 92
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=97.37 E-value=0.00028 Score=73.21 Aligned_cols=55 Identities=22% Similarity=0.317 Sum_probs=44.9
Q ss_pred CCccccccceeEEEEEEc----CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 533 SLKIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 533 ~~~iG~G~~G~Vykg~l~----g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
..+||+|+||.||+|... +..||||.+.... ....+.+|+.++ .+++|||||+++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l-~~l~h~niv~~~ 64 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALL-RELKHPNVISLQ 64 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHH-HhcCCCCCccee
Confidence 458999999999999864 4789999985432 234688999999 999999999864
No 93
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.37 E-value=0.00017 Score=75.76 Aligned_cols=62 Identities=16% Similarity=0.185 Sum_probs=50.9
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++|.....||.|+||.||++... |..||+|.+..... .....|.+|+.++ .+++|||||+++
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l-~~l~h~~iv~~~ 69 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVL-HECNSPYIVGFY 69 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHH-HHCCCCCCCeEE
Confidence 45666778999999999999986 78899999865322 2245799999999 999999999875
No 94
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=97.36 E-value=0.00015 Score=76.00 Aligned_cols=61 Identities=21% Similarity=0.288 Sum_probs=49.9
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC---CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~---~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||+|... |..||||++.... ......|.+|+.++ .+++||||++++
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l-~~~~h~~iv~~~ 67 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDIL-TTTKSEWLVKLL 67 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHH-HhCCCCCCccEE
Confidence 4666678999999999999986 7899999995431 22346688999999 999999999874
No 95
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=97.36 E-value=0.00015 Score=77.63 Aligned_cols=61 Identities=16% Similarity=0.144 Sum_probs=49.4
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC---CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~---~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|....+||.|+||.||++... |..||||++.... ......|.+|+.++ .+++|||||+++
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il-~~l~hp~iv~~~ 67 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVL-AESDSPWVVSLY 67 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHH-HhCCCCCcceEE
Confidence 5666778999999999999875 7899999985421 22345688999999 999999999874
No 96
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=97.36 E-value=0.00015 Score=73.58 Aligned_cols=64 Identities=23% Similarity=0.440 Sum_probs=51.1
Q ss_pred hhcCCCcCCccccccceeEEEEEEc-------CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 526 ATHNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 526 aT~~F~~~~~iG~G~~G~Vykg~l~-------g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++++|...+.||+|+||.||+|... +..||||++.... ......|.+|+.++ ..++||||++++
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l-~~l~~~~iv~~~ 75 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM-KEFNCHHVVRLL 75 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHH-HhCCCCCeeeEE
Confidence 4567888889999999999999764 3579999985432 22345699999999 999999999864
No 97
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=97.36 E-value=0.00017 Score=73.82 Aligned_cols=60 Identities=20% Similarity=0.202 Sum_probs=48.1
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCC---CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~---~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|....+||+|+||.||++... |..||||.+.... ......|.+|+.++ .+++|||||+++
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l-~~l~h~~iv~~~ 66 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL-EKVNSRFVVSLA 66 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHH-HhcCCCCEeeee
Confidence 455678999999999999875 7899999996532 12235688999999 999999999764
No 98
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=97.35 E-value=0.00021 Score=73.10 Aligned_cols=60 Identities=20% Similarity=0.313 Sum_probs=47.3
Q ss_pred CCcCCccccccceeEEEEEEc-------CeEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~-------g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||+|+||.||+|... +..|++|.+..... .....|.+|+.++ ..++|||||+++
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l-~~l~h~~iv~~~ 69 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLL-KQVNHPHVIKLY 69 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHH-hhCCCCCEeeEE
Confidence 455678999999999999863 25689998865332 2346799999999 999999999864
No 99
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=97.35 E-value=0.0002 Score=75.66 Aligned_cols=61 Identities=21% Similarity=0.365 Sum_probs=47.7
Q ss_pred CCCcCCccccccceeEEEEEE-------cCeEEEEEEccCCCCC-ChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLL-------RHMQVAIKMLHPHSLQ-GPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l-------~g~~VAVK~L~~~~~~-~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
+|.....||.|+||.||+|.. .+..||||++...... ....+.+|+.++ .++ +|||||+++
T Consensus 8 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l-~~l~~h~niv~~~ 77 (343)
T cd05103 8 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL-IHIGHHLNVVNLL 77 (343)
T ss_pred HhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHH-HhccCCccHhhhc
Confidence 455567899999999999973 2578999999654322 245688999999 999 789999875
No 100
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.34 E-value=0.00022 Score=73.03 Aligned_cols=61 Identities=20% Similarity=0.203 Sum_probs=50.6
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||++... ++.||+|.+..... .....|.+|+.++ .+++||||++++
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l-~~l~h~~iv~~~ 65 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEIN-KSCKSPYIVKYY 65 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHH-HhCCCCCeeeee
Confidence 5666778999999999999985 68999999865322 3356799999999 999999999864
No 101
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=97.33 E-value=0.0002 Score=73.22 Aligned_cols=63 Identities=25% Similarity=0.424 Sum_probs=50.7
Q ss_pred hcCCCcCCccccccceeEEEEEEc-------CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 527 THNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 527 T~~F~~~~~iG~G~~G~Vykg~l~-------g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.++|.....||.|+||.||++... +..||+|.+.... ......|.+|+.++ .+++||||++++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l-~~l~h~~iv~~~ 74 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALM-AEFDHPNIVKLL 74 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHH-HhcCCCchheEE
Confidence 456777889999999999999763 4789999986532 22346799999999 999999999764
No 102
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=97.33 E-value=0.00026 Score=72.15 Aligned_cols=60 Identities=13% Similarity=0.165 Sum_probs=48.2
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|....+||.|+||.||+|... +..||||.+.... ......|.+|+.++ .+++||||++++
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l-~~l~h~~iv~~~ 65 (279)
T cd06619 3 IQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEIL-YKCDSPYIIGFY 65 (279)
T ss_pred chheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHH-HhCCCCCeeeEE
Confidence 444568999999999999874 7899999985432 22345799999999 999999999865
No 103
>PTZ00036 glycogen synthase kinase; Provisional
Probab=97.33 E-value=0.00019 Score=78.85 Aligned_cols=57 Identities=21% Similarity=0.325 Sum_probs=47.1
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCcccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDS 589 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~l 589 (591)
.+|....+||+|+||.||+|... +..||||++.... ....+|+.++ .+++|||||++
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il-~~l~h~niv~l 124 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIM-KNLNHINIIFL 124 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHH-HhcCCCCCcce
Confidence 45777789999999999999885 7899999885422 2356899999 99999999986
No 104
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=97.33 E-value=0.00025 Score=72.02 Aligned_cols=61 Identities=25% Similarity=0.260 Sum_probs=49.2
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|...++||.|+||.||+|... |..||+|.+.... ......|.+|+.++ .+++||||++++
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 66 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRML-KQLRHENLVNLI 66 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHH-HhcCCcchhhHH
Confidence 4555678999999999999986 6899999985422 22346789999999 999999998764
No 105
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.32 E-value=0.00022 Score=72.68 Aligned_cols=60 Identities=37% Similarity=0.402 Sum_probs=47.3
Q ss_pred CCcCCccccccceeEEEEEEc------CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~------g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||+|+||.||+|.+. +..||+|.+.... ......|.+|+.++ .+++||||++++
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~ 73 (283)
T cd05090 7 VRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLM-AELHHPNIVCLL 73 (283)
T ss_pred ceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHH-hhCCCCCeeeEE
Confidence 444568999999999999852 4789999996432 22346799999999 999999999764
No 106
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=97.32 E-value=0.00018 Score=79.26 Aligned_cols=60 Identities=25% Similarity=0.421 Sum_probs=49.4
Q ss_pred CCcCCccccccceeEEEEEEc----C--eEEEEEEccCC-CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR----H--MQVAIKMLHPH-SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~----g--~~VAVK~L~~~-~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.....+||+|.||.||+|.+. | .-||||.-..+ .....+.|.+|..+| .+++|||||+||
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iM-rnfdHphIikLI 457 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIM-RNFDHPHIIKLI 457 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHH-HhCCCcchhhee
Confidence 345678999999999999884 3 56899988664 334467799999999 999999999986
No 107
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=97.32 E-value=0.00028 Score=70.80 Aligned_cols=59 Identities=27% Similarity=0.533 Sum_probs=48.6
Q ss_pred CCcCCccccccceeEEEEEEc-CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~-g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||+|+||.||++... +..||+|.+..... ....|.+|+.++ .+++|||+++++
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l-~~l~~~~i~~~~ 67 (260)
T cd05070 8 LQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIM-KKLRHDKLVQLY 67 (260)
T ss_pred hhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHH-HhcCCCceEEEE
Confidence 344568999999999999877 67899999965433 356799999999 999999998764
No 108
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=97.32 E-value=0.00025 Score=74.80 Aligned_cols=62 Identities=18% Similarity=0.225 Sum_probs=52.0
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.+|.....||.|+||.||+|... |..||+|.+..........+.+|+.++ .+++||||++++
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l-~~l~h~~i~~~~ 68 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKII-RRLDHDNIVKVY 68 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHH-HhcCCCcchhhH
Confidence 45666778999999999999875 789999998665555567799999999 999999999764
No 109
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=97.32 E-value=0.00024 Score=73.69 Aligned_cols=61 Identities=20% Similarity=0.214 Sum_probs=49.7
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||++... |..||+|.+..... .....|.+|+.++ .+++||||++++
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l-~~l~h~~iv~~~ 65 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVL-HECNSPYIVGFY 65 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHH-HhCCCCCCCeEE
Confidence 5777789999999999999876 67899999865322 2235688999999 999999999874
No 110
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=97.32 E-value=0.00032 Score=70.22 Aligned_cols=61 Identities=28% Similarity=0.502 Sum_probs=50.6
Q ss_pred cCCCcCCccccccceeEEEEEEc-CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~-g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++|....+||.|+||.||++... +..||||.+.... .....|.+|+.++ .+++||||++++
T Consensus 6 ~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l-~~l~h~~i~~~~ 67 (261)
T cd05034 6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIM-KKLRHDKLVQLY 67 (261)
T ss_pred hheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHH-hhCCCCCEeeee
Confidence 45666678999999999999887 5789999996543 3457899999999 999999999874
No 111
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=97.32 E-value=0.00027 Score=71.53 Aligned_cols=60 Identities=25% Similarity=0.304 Sum_probs=48.5
Q ss_pred CCcCCccccccceeEEEEEEc------CeEEEEEEccCCCCC-ChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQ-GPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~------g~~VAVK~L~~~~~~-~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||+|+||.||++.+. +..||||.+...... ....|.+|+.++ ..+.||||++++
T Consensus 6 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l-~~l~~~~i~~~~ 72 (284)
T cd05038 6 LKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEIL-RTLDHENIVKYK 72 (284)
T ss_pred chhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHH-HhCCCCChheEE
Confidence 334468999999999999874 578999999654332 356899999999 999999999863
No 112
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=97.31 E-value=0.00026 Score=71.40 Aligned_cols=62 Identities=18% Similarity=0.265 Sum_probs=49.8
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC-----CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-----QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~-----~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.||.....||+|+||.||++... |..|++|.+..... .....|.+|+.++ .+++||||++++
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 70 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLL-KNLQHERIVQYY 70 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHH-HHcCCCCeeeEE
Confidence 36777889999999999999875 78999998854321 1234688999999 999999998764
No 113
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.31 E-value=0.00022 Score=75.71 Aligned_cols=63 Identities=17% Similarity=0.243 Sum_probs=51.4
Q ss_pred hcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCC--CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 527 T~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.++|.....||.|+||.||++... |..||||.+... .......+.+|+.++ .+++||||++++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~ 86 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLL-KCVNHKNIISLL 86 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHH-HhCCCCCEeeee
Confidence 456777789999999999999875 789999999542 223356788999999 999999999874
No 114
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=97.31 E-value=0.00022 Score=71.78 Aligned_cols=62 Identities=16% Similarity=0.316 Sum_probs=49.3
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC--C---CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--L---QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~---~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.+|.....||.|+||.||.|... |..||||.+.... . .....|.+|+.++ .+++||||++++
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l-~~l~h~~i~~~~ 70 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLL-KNLLHERIVQYY 70 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHH-HhcCCCCeeeEE
Confidence 35777789999999999999875 7899999885321 1 1235688999999 999999999754
No 115
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=97.31 E-value=0.00014 Score=73.99 Aligned_cols=71 Identities=24% Similarity=0.409 Sum_probs=57.7
Q ss_pred cCHHHHHHhhcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 518 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 518 ~s~~el~~aT~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
+.+..+..++++|.....||+|+||.||++... |..+|+|.+.... .....|.+|+.++ .++ .||||++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l-~~l~~h~~i~~~~ 81 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNIL-KALSDHPNVVKFY 81 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHH-HHHhcCCCeeeee
Confidence 455667778888988899999999999999885 7899999986432 2235788999999 888 699999864
No 116
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=97.30 E-value=0.00028 Score=71.04 Aligned_cols=59 Identities=25% Similarity=0.376 Sum_probs=47.1
Q ss_pred CcCCccccccceeEEEEEEc-----CeEEEEEEccCCCC--CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 531 DPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSL--QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 531 ~~~~~iG~G~~G~Vykg~l~-----g~~VAVK~L~~~~~--~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.....||+|+||.||+|.+. +..||||.+..... .....|.+|+..+ ..+.|||+++++
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~iv~~~ 67 (273)
T cd05035 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACM-KDFDHPNVMKLI 67 (273)
T ss_pred ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHH-HhCCCCCeeeEE
Confidence 34568999999999999874 26799999865322 2346799999999 999999999864
No 117
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=97.30 E-value=0.00034 Score=70.97 Aligned_cols=61 Identities=34% Similarity=0.457 Sum_probs=50.1
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|....+||.|+||.||+|... |..||||.+..... .....+.+|+.++ .+++||||++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l-~~l~h~~i~~~~ 64 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLM-KELKHENIVRLH 64 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHH-HhhcCCCEeeee
Confidence 4666779999999999999985 78999999865432 2346688999999 999999999864
No 118
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=97.30 E-value=0.00014 Score=73.87 Aligned_cols=61 Identities=23% Similarity=0.380 Sum_probs=50.6
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||+|... +..||+|.+..........|.+|+.++ .+++||||++++
T Consensus 6 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 68 (280)
T cd06611 6 IWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDIL-SECKHPNIVGLY 68 (280)
T ss_pred HHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHH-HhCCCCceeEEE
Confidence 4555567999999999999986 789999998655444456799999999 999999999874
No 119
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=97.30 E-value=0.00036 Score=69.97 Aligned_cols=62 Identities=23% Similarity=0.354 Sum_probs=51.1
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCC---CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~---~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++|.....||.|+||.||+|... |..||+|.+... .......|.+|+.++ .++.|+|+++++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l-~~~~~~~i~~~~ 68 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLL-KQLDHPNVIKYL 68 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHH-HhCCCCCeeeee
Confidence 46777789999999999999986 789999988542 222356799999999 999999998764
No 120
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=97.30 E-value=0.00033 Score=72.18 Aligned_cols=61 Identities=28% Similarity=0.372 Sum_probs=48.7
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.|.....||.|+||.||+|... +..||+|.+.... ......+.+|+.++ .+++||||++++
T Consensus 7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l-~~l~h~nI~~~~ 70 (301)
T cd07873 7 TYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLL-KDLKHANIVTLH 70 (301)
T ss_pred ceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHH-HhcCCCCcceEE
Confidence 3455568999999999999876 6899999985432 22345688999999 999999999874
No 121
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=97.29 E-value=0.00029 Score=71.04 Aligned_cols=58 Identities=24% Similarity=0.354 Sum_probs=46.3
Q ss_pred cCCccccccceeEEEEEEc--C--eEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 532 PSLKIGEGGYGSIYKGLLR--H--MQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 532 ~~~~iG~G~~G~Vykg~l~--g--~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
....||+|+||.||+|.+. + ..||+|.+.... ......|..|+.++ ..++||||++++
T Consensus 3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l-~~l~h~~iv~~~ 66 (272)
T cd05075 3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCM-KEFDHPNVMRLI 66 (272)
T ss_pred cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHH-HhCCCCCcceEE
Confidence 3468999999999999986 3 368999885432 23356789999999 999999999864
No 122
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=97.29 E-value=0.00028 Score=72.16 Aligned_cols=64 Identities=28% Similarity=0.363 Sum_probs=51.3
Q ss_pred hhcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 526 aT~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++.+|.....||.|+||.||+|... |..||||.+..... .....+.+|+.++ ..++|+||+++.
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l-~~l~h~ni~~~~ 69 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLL-KGLKHANIVLLH 69 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHH-HhcCCCCEeEEE
Confidence 4566777789999999999999875 78999999854332 2234678999999 999999998763
No 123
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=97.28 E-value=0.00025 Score=78.18 Aligned_cols=67 Identities=21% Similarity=0.256 Sum_probs=55.3
Q ss_pred HHHhhcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC--CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 523 IEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 523 l~~aT~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~--~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
....+.+|.....||.|.|+.|..+... |+.||||.++.... .....+.+|+.+| ..++|||||+|+
T Consensus 51 ~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~im-k~l~HPnIvkl~ 121 (596)
T KOG0586|consen 51 DSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIM-KSLNHPNIVKLF 121 (596)
T ss_pred ccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHH-HhcCCcceeeee
Confidence 3456677888889999999999999886 89999999976432 2234589999999 999999999885
No 124
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=97.28 E-value=0.00022 Score=72.26 Aligned_cols=60 Identities=23% Similarity=0.398 Sum_probs=48.4
Q ss_pred CCcCCccccccceeEEEEEEc-------CeEEEEEEccCCCCC-ChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~-------g~~VAVK~L~~~~~~-~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|...+.||+|+||.||+|... +..||||.+...... ....|.+|+.++ .++.|||+++++
T Consensus 7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~ 74 (280)
T cd05049 7 IVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELL-TNFQHENIVKFY 74 (280)
T ss_pred hhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHH-HhcCCCCchhee
Confidence 445568999999999999864 368999999654333 356899999999 999999999764
No 125
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=97.27 E-value=0.00033 Score=72.47 Aligned_cols=55 Identities=22% Similarity=0.319 Sum_probs=44.8
Q ss_pred CCccccccceeEEEEEEc----CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 533 SLKIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 533 ~~~iG~G~~G~Vykg~l~----g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
..+||+|+||.||+|... +..||+|.+.... ....+.+|+.++ .+++|||||+++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l-~~l~h~niv~~~ 64 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALL-RELKHPNVIALQ 64 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHH-HhCCCCCeeeEE
Confidence 358999999999999874 3689999986532 234688999999 999999999763
No 126
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=97.27 E-value=0.0003 Score=71.53 Aligned_cols=60 Identities=27% Similarity=0.399 Sum_probs=47.9
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||+|... +..||||.+.... ......|.+|+.++ .+++||||++++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l-~~l~h~~iv~~~ 68 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVL-SQCDSPYVTKYY 68 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHH-HhcCCCCEeEEE
Confidence 445568999999999999875 7899999985432 22346789999999 999999999764
No 127
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=97.27 E-value=0.00027 Score=75.58 Aligned_cols=61 Identities=16% Similarity=0.113 Sum_probs=49.6
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC---CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~---~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||+|+||.||++... |..||||++.... ......|.+|+.++ .++.||||++++
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il-~~l~h~~iv~~~ 67 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDIL-AEADNEWVVKLY 67 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHH-HhCCCCCcceEE
Confidence 4666778999999999999875 7899999985421 22345688999999 999999999864
No 128
>PHA03212 serine/threonine kinase US3; Provisional
Probab=97.26 E-value=0.00027 Score=76.44 Aligned_cols=55 Identities=16% Similarity=0.090 Sum_probs=46.0
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||+|+||.||++... +..||||... ...+.+|+.++ .+++|||||+++
T Consensus 93 ~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il-~~l~HpnIv~~~ 149 (391)
T PHA03212 93 GFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHIL-RAINHPSIIQLK 149 (391)
T ss_pred CcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHH-HhCCCCCCCCEe
Confidence 3555678999999999999875 7899999753 23578999999 999999999874
No 129
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=97.26 E-value=0.00035 Score=70.50 Aligned_cols=59 Identities=31% Similarity=0.547 Sum_probs=48.3
Q ss_pred CCcCCccccccceeEEEEEEc-CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~-g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|....+||+|+||.||+|... +..||+|++.... .....|.+|+.++ .+++||||++++
T Consensus 8 ~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l-~~l~~~~i~~~~ 67 (262)
T cd05071 8 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVM-KKLRHEKLVQLY 67 (262)
T ss_pred eeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHH-HhCCCCCcceEE
Confidence 555668999999999999886 4579999996532 2356799999999 999999999764
No 130
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=97.26 E-value=0.00043 Score=69.28 Aligned_cols=62 Identities=16% Similarity=0.270 Sum_probs=50.5
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC-----CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-----QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~-----~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++|...+.||.|+||.||++... |..||+|.+..... .....|.+|+.++ .+++||||++++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~ 70 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLL-KNLQHERIVQYY 70 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHH-HhCCCCCeeeeE
Confidence 46888899999999999999874 78999999854321 1235689999999 999999999864
No 131
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.25 E-value=0.00038 Score=71.76 Aligned_cols=61 Identities=21% Similarity=0.252 Sum_probs=50.4
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||+|... |..||+|.+..........|.+|+.++ ..++||||++++
T Consensus 20 ~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l-~~~~h~~i~~~~ 82 (297)
T cd06656 20 KYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVM-RENKNPNIVNYL 82 (297)
T ss_pred hceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHH-HhCCCCCEeeEE
Confidence 3555568999999999999864 789999999655444556789999999 999999999864
No 132
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=97.25 E-value=0.00021 Score=76.68 Aligned_cols=61 Identities=15% Similarity=0.115 Sum_probs=49.6
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC---CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~---~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.|....+||+|+||.||++... +..||||.+.... ......|.+|+.++ .++.|||||+++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il-~~~~h~~iv~~~ 67 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDIL-AEADNEWVVRLY 67 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHH-HhCCCCcCCeEE
Confidence 4666789999999999999875 6899999986422 12245688999999 999999999875
No 133
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.25 E-value=0.0002 Score=78.55 Aligned_cols=59 Identities=25% Similarity=0.289 Sum_probs=48.5
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCC---hhHHHHHHHHHHcCCCCCCcccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEVGAYESFIFHFNLVDS 589 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~---~~~F~~Ev~il~s~lrHpNLV~l 589 (591)
|.....||.|+||.||.+.-. ...||||++.....+. +.+.+.||..| .+++|||.+..
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL-~~l~HPntieY 91 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFL-RQLRHPNTIEY 91 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHH-HhccCCCcccc
Confidence 555677999999999998765 5789999997765554 56678999999 99999999853
No 134
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=97.23 E-value=0.00029 Score=70.59 Aligned_cols=61 Identities=20% Similarity=0.241 Sum_probs=49.8
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC---CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~---~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||++... +..||+|.+.... ......|.+|+.++ .+++||||++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 66 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRIL-QELNHPFLVNLW 66 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHH-HhCCCCChHHHH
Confidence 3555678999999999999886 7899999996432 23457899999999 999999999763
No 135
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=97.23 E-value=0.00037 Score=70.01 Aligned_cols=61 Identities=13% Similarity=0.195 Sum_probs=49.1
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCC------ChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ------GPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~------~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||+|... |..||+|.+...... ....|.+|+.++ .+++|||||+++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~iv~~~ 69 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLM-ARLNHPHIIRML 69 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHH-HHcCCCceehhh
Confidence 4666788999999999999864 789999998643211 245789999999 999999999875
No 136
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=97.23 E-value=0.00034 Score=70.79 Aligned_cols=62 Identities=23% Similarity=0.396 Sum_probs=49.5
Q ss_pred cCCCcCCccccccceeEEEEEEc-------CeEEEEEEccCCCCC-ChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~-------g~~VAVK~L~~~~~~-~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.+|.....||.|+||.||+|... ...|++|.+...... ....|.+|+.++ .+++||||++++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l-~~l~h~~iv~~~ 74 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMF-RKLSHKNVVRLL 74 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHH-HhcCCcceeeeE
Confidence 35666678999999999999864 257999998654332 346799999999 999999999875
No 137
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=97.23 E-value=0.00034 Score=69.63 Aligned_cols=61 Identities=18% Similarity=0.295 Sum_probs=50.0
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCC--CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|...+.||+|+||.||++... |..|++|.+... .......|.+|+.++ .+++||||++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 65 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVL-AKLDSSYIIRYY 65 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHH-HhcCCCCeehhe
Confidence 3556678999999999999885 789999998542 233457799999999 999999999864
No 138
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=97.23 E-value=0.00029 Score=74.16 Aligned_cols=61 Identities=16% Similarity=0.187 Sum_probs=50.3
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC---CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~---~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||++... |..||||++.... ......|..|+.++ ..++||||++++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l-~~~~~~~i~~~~ 67 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDIL-ADADSPWIVKLY 67 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHH-HhcCCCCccchh
Confidence 4666778999999999999987 8899999996421 23356789999999 999999999874
No 139
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=97.22 E-value=0.00035 Score=70.92 Aligned_cols=62 Identities=23% Similarity=0.263 Sum_probs=49.5
Q ss_pred cCCCcCCccccccceeEEEEEEc------CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~------g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++|.....||+|+||.||+|... +..|++|.+.... ......|.+|+.++ .++.||||++++
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l-~~l~h~ni~~~~ 74 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLL-YGLSHQNILPIL 74 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHH-HhCCCCCCCeEE
Confidence 45666778999999999999875 3789999986432 22356689999999 999999999864
No 140
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=97.22 E-value=0.00028 Score=71.03 Aligned_cols=63 Identities=25% Similarity=0.468 Sum_probs=50.4
Q ss_pred hcCCCcCCccccccceeEEEEEEc--C---eEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 527 THNFDPSLKIGEGGYGSIYKGLLR--H---MQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 527 T~~F~~~~~iG~G~~G~Vykg~l~--g---~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+++|...+.||+|+||.||+|... + ..||+|.+.... ......|.+|+.++ .+++|||+++++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 72 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIM-GQFSHHNIIRLE 72 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHH-hcCCCCCeeEEE
Confidence 346777889999999999999885 3 379999986542 22346799999999 999999998764
No 141
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=97.22 E-value=0.0003 Score=75.46 Aligned_cols=62 Identities=23% Similarity=0.387 Sum_probs=48.6
Q ss_pred cCCCcCCccccccceeEEEEEEc-------CeEEEEEEccCCCC-CChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~-------g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
++|...+.||+|+||.||++... +..||||++..... .....|.+|+.++ ..+ +|||||+++
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il-~~l~~h~nIv~~~ 108 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKIL-SHLGQHKNIVNLL 108 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHH-HhhccCCceeeEe
Confidence 35666789999999999998753 25799999965332 2245688999999 988 899999875
No 142
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=97.22 E-value=0.00023 Score=71.65 Aligned_cols=60 Identities=30% Similarity=0.347 Sum_probs=48.8
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||++... +..||+|.+..........|.+|+.++ ..++||||++++
T Consensus 11 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~-~~l~h~~ii~~~ 72 (267)
T cd06645 11 FELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMM-KDCKHSNIVAYF 72 (267)
T ss_pred HHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHH-HhCCCCCeeeEE
Confidence 344457999999999999875 789999998655444456788999999 999999999864
No 143
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=97.21 E-value=0.00038 Score=82.10 Aligned_cols=61 Identities=23% Similarity=0.345 Sum_probs=50.2
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCC---ChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~---~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|...++||+|+||.||+|... |..||||++...... ....|.+|+.++ .+++|||||+++
T Consensus 3 rYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~IL-s~L~HPNIVkl~ 68 (932)
T PRK13184 3 RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIA-ADLIHPGIVPVY 68 (932)
T ss_pred CeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHH-HhCCCcCcCeEE
Confidence 4666779999999999999875 789999999653222 245799999999 999999999874
No 144
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=97.21 E-value=0.0004 Score=70.97 Aligned_cols=62 Identities=26% Similarity=0.377 Sum_probs=49.6
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCC-ChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~-~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++|.....||.|+||.||+|... |..||||.+...... ....+.+|+.++ .+++||||++++
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l-~~l~h~~i~~~~ 69 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLL-KDLKHANIVTLH 69 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHH-hhCCCcceeeEE
Confidence 34666678999999999999875 789999998653322 234578999999 999999999864
No 145
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=97.21 E-value=0.00033 Score=70.54 Aligned_cols=59 Identities=32% Similarity=0.514 Sum_probs=49.4
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|...+.||.|+||.||+|... +..||+|.+... ......|.+|+.++ .+++||||++++
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l-~~l~h~~i~~~~ 68 (263)
T cd05052 8 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVM-KEIKHPNLVQLL 68 (263)
T ss_pred eEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHH-HhCCCCChhheE
Confidence 555678999999999999986 789999998643 33456799999999 999999999865
No 146
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=97.21 E-value=0.00036 Score=72.06 Aligned_cols=56 Identities=30% Similarity=0.338 Sum_probs=47.4
Q ss_pred CccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 534 ~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
..||.|+||.||++... +..||||.+..........|.+|+.++ ..++||||++++
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l-~~l~hp~i~~~~ 84 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIM-RDYQHQNVVEMY 84 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHH-HhCCCCchhhhh
Confidence 47999999999999874 789999999655445566789999999 999999998764
No 147
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=97.20 E-value=0.00037 Score=70.07 Aligned_cols=59 Identities=29% Similarity=0.398 Sum_probs=47.8
Q ss_pred CCcCCccccccceeEEEEEEcC-eEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~g-~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||+|+||.||.|...+ ..||||.+.... .....|.+|+.++ .+++||||++++
T Consensus 6 ~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l-~~l~h~~i~~~~ 65 (256)
T cd05113 6 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVM-MKLSHEKLVQLY 65 (256)
T ss_pred eEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHH-hcCCCCCeeeEE
Confidence 3344579999999999998874 579999986432 3356799999999 999999999874
No 148
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=97.20 E-value=0.00033 Score=71.74 Aligned_cols=60 Identities=22% Similarity=0.252 Sum_probs=47.6
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC---CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~---~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|...+.||.|+||.||++... |..||+|.+..... .....|.+|+.++ .+++|+|++.++
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il-~~l~~~~i~~~~ 66 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQIL-EKVNSQFVVNLA 66 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHH-HHcCCcCceeEE
Confidence 444568999999999999886 78999999865321 2234578999999 999999999764
No 149
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=97.20 E-value=0.00043 Score=73.61 Aligned_cols=63 Identities=19% Similarity=0.216 Sum_probs=51.4
Q ss_pred hcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCC--CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 527 T~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.++|.....||+|+||.||++... +..||||++... .......+.+|+.++ ..++||||+.++
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~~ii~~~ 89 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM-KCVNHKNIIGLL 89 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHH-HhcCCCCccccc
Confidence 456777889999999999999875 789999999643 223346788999999 999999999764
No 150
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=97.20 E-value=0.00047 Score=70.65 Aligned_cols=60 Identities=23% Similarity=0.295 Sum_probs=48.0
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCC-----ChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-----GPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~-----~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||+|... |..||||.+...... ....+..|+.++ .+++||||++++
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l-~~~~h~~i~~~~ 68 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLL-QELKHPNIIGLL 68 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHH-hhcCCCCChhhh
Confidence 455668999999999999975 789999999654322 234567899999 999999999864
No 151
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=97.20 E-value=0.00049 Score=68.36 Aligned_cols=58 Identities=33% Similarity=0.519 Sum_probs=48.5
Q ss_pred cCCccccccceeEEEEEEcC------eEEEEEEccCCCCC-ChhHHHHHHHHHHcCCCCCCccccc
Q 007740 532 PSLKIGEGGYGSIYKGLLRH------MQVAIKMLHPHSLQ-GPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 532 ~~~~iG~G~~G~Vykg~l~g------~~VAVK~L~~~~~~-~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
....||.|+||.||++...+ ..||+|++...... ....|..|+.++ ..++||||++++
T Consensus 3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~ 67 (258)
T smart00219 3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIM-RKLDHPNIVKLL 67 (258)
T ss_pred ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHH-HhcCCCchheEE
Confidence 34689999999999999863 78999999665433 467899999999 999999999875
No 152
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=97.20 E-value=0.00033 Score=74.20 Aligned_cols=64 Identities=19% Similarity=0.196 Sum_probs=51.4
Q ss_pred hhcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 526 aT~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
..++|.....||+|+||.||++... +..||||.+.... ......+.+|+.++ ..++||||++++
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~ 82 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM-KCVNHKNIISLL 82 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHH-HHhCCCchhcee
Confidence 3456777789999999999999765 7899999996432 22346788999999 999999999874
No 153
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.19 E-value=0.00016 Score=77.69 Aligned_cols=56 Identities=27% Similarity=0.342 Sum_probs=45.5
Q ss_pred CCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHH--HHHHHHHHcCCC-CCCccccc
Q 007740 533 SLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEF--QQEVGAYESFIF-HFNLVDSF 590 (591)
Q Consensus 533 ~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F--~~Ev~il~s~lr-HpNLV~li 590 (591)
..+||.|.||.||+|.-. |..||||++... .+.++++ .+||..| .+|+ |||||+|.
T Consensus 15 i~klGDGTfGsV~la~~~~~~~~VAIK~MK~K-f~s~ee~~nLREvksL-~kln~hpniikL~ 75 (538)
T KOG0661|consen 15 IRKLGDGTFGSVYLAKSKETGELVAIKKMKKK-FYSWEECMNLREVKSL-RKLNPHPNIIKLK 75 (538)
T ss_pred HHHhcCCcceeEEEeeecCCCceeeHHHHHhh-hccHHHHHHHHHHHHH-HhcCCCCcchhhH
Confidence 357999999999999875 889999998543 2335555 6899999 9999 99999873
No 154
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=97.19 E-value=0.00055 Score=69.53 Aligned_cols=60 Identities=33% Similarity=0.392 Sum_probs=48.6
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||+|... |..||||.+.... ......+.+|+.++ .+++||||++++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 65 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLL-KELQHPNIVCLQ 65 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHH-HhcCCCCEeeeE
Confidence 455568999999999999985 7899999985432 22246788999999 999999999874
No 155
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=97.19 E-value=0.00058 Score=69.35 Aligned_cols=59 Identities=31% Similarity=0.371 Sum_probs=47.8
Q ss_pred CcCCccccccceeEEEEEEc--CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 531 DPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 531 ~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.....||.|++|.||+|... |..||||++.... ......|.+|+.++ .+++|||+++++
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l-~~l~~~~iv~~~ 64 (283)
T cd07835 2 QKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLL-KELNHPNIVRLL 64 (283)
T ss_pred chheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHH-HhcCCCCccCHh
Confidence 34568999999999999875 8999999986532 22245789999999 999999999864
No 156
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=97.19 E-value=0.00045 Score=69.90 Aligned_cols=61 Identities=25% Similarity=0.326 Sum_probs=49.3
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||+|... |..||+|.+.... ......|.+|+.++ ..++|||+++++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 65 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFL-SQCRSPYITKYY 65 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHH-HHcCCCCeeeee
Confidence 3455568999999999999986 7899999986432 33356789999999 999999998764
No 157
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=97.19 E-value=0.00019 Score=76.84 Aligned_cols=63 Identities=19% Similarity=0.213 Sum_probs=50.4
Q ss_pred hcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCC---CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 527 T~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~---~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.++|.....||+|+||.||++... |..||||.+... .......|.+|+.++ ..++||||++++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il-~~~~h~~iv~~~ 109 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIM-AHANSEWIVQLH 109 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHH-HhCCCCCcceEE
Confidence 345666778999999999999886 789999998542 222345588999999 999999999874
No 158
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=97.19 E-value=0.00044 Score=68.81 Aligned_cols=60 Identities=25% Similarity=0.392 Sum_probs=48.5
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCC-----CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-----LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~-----~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||+|... +..|++|.+.... ......|.+|+.++ .+++||||++++
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l-~~~~h~~i~~~~ 68 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALL-SKLQHPNIVQYL 68 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHH-HhcCCCCchhee
Confidence 444568999999999999985 7899999985432 12346789999999 999999999865
No 159
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=97.18 E-value=0.00029 Score=70.43 Aligned_cols=58 Identities=26% Similarity=0.402 Sum_probs=48.9
Q ss_pred CCcCCccccccceeEEEEEEcCeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||+|...+..||+|.+.... ....|.+|+.++ .+++|||+++++
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~--~~~~~~~e~~~l-~~~~~~~i~~~~ 65 (254)
T cd05083 8 LTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDV--TAQAFLEETAVM-TKLHHKNLVRLL 65 (254)
T ss_pred ceeeeeeccCCCCceEecccCCCceEEEeecCcc--hHHHHHHHHHHH-HhCCCCCcCeEE
Confidence 4556789999999999999889999999986532 246799999999 999999999864
No 160
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=97.18 E-value=0.00043 Score=70.53 Aligned_cols=61 Identities=25% Similarity=0.444 Sum_probs=48.9
Q ss_pred CCCcCCccccccceeEEEEEEc-------CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~-------g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||+|+||.||++... +..||+|.+..........|.+|+.++ .++.||||++++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 73 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL-TVLQHQHIVRFY 73 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHH-hcCCCCCCceEE
Confidence 3455678999999999999642 468999998655444467899999999 999999999864
No 161
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=97.18 E-value=0.00059 Score=69.24 Aligned_cols=61 Identities=30% Similarity=0.329 Sum_probs=49.0
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||+|... |..||+|.+.... ......|.+|+.++ .+++||||++++
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l-~~~~h~~i~~~~ 66 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRML-KQLKHPNLVNLI 66 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHH-HhCCCCCEeeee
Confidence 4555678999999999999986 7899999985432 22345689999999 999999999864
No 162
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=97.18 E-value=0.00047 Score=68.92 Aligned_cols=62 Identities=29% Similarity=0.367 Sum_probs=51.8
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++|.....||.|+||.||++... +..+++|.+..........+.+|+.++ .+++||||++++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l-~~~~h~~i~~~~ 66 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISML-KECRHPNIVAYF 66 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHH-HhCCCCChhceE
Confidence 35666678999999999999885 678999999665444567899999999 999999999874
No 163
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=97.17 E-value=0.00046 Score=70.95 Aligned_cols=63 Identities=25% Similarity=0.309 Sum_probs=50.9
Q ss_pred hcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC--CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 527 T~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~--~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+++|....+||.|+||.||+|... +..||||.+..... .....+.+|+.++ .+++||||++++
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 73 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKIL-KKLKHPNVVPLI 73 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHH-HhcCCCCccchh
Confidence 456777789999999999999986 78999999854322 2234678999999 999999999864
No 164
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=97.17 E-value=0.00041 Score=69.12 Aligned_cols=61 Identities=26% Similarity=0.382 Sum_probs=49.7
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCC--CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|...+.||.|+||.||+|... |..||+|.+... .......|.+|+.++ ..++||||++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l-~~~~h~~i~~~~ 65 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILL-AKMKHPNIVTFF 65 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHH-HhCCCCChhhhh
Confidence 3556678999999999999986 789999998543 223456789999999 999999999865
No 165
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.17 E-value=0.00033 Score=71.36 Aligned_cols=60 Identities=23% Similarity=0.321 Sum_probs=48.3
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||++... |..||+|.+.... ......|.+|+.++ .+++||||++++
T Consensus 3 ~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l-~~~~~~~i~~~~ 65 (286)
T cd06622 3 IEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDIL-HKAVSPYIVDFY 65 (286)
T ss_pred hhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHH-HhcCCCcHHhhh
Confidence 444568999999999999986 7899999885432 22246799999999 999999999864
No 166
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=97.17 E-value=0.00027 Score=75.82 Aligned_cols=62 Identities=21% Similarity=0.280 Sum_probs=49.6
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCC---CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~---~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++|.....||+|+||.||++... +..||+|.+... .......|.+|+.++ ..++|||||+++
T Consensus 43 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~-~~~~hp~iv~~~ 109 (370)
T cd05621 43 EDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSPWVVQLF 109 (370)
T ss_pred HHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHH-HhCCCCCEeeEE
Confidence 45666678999999999999886 689999998542 122345688999999 999999999875
No 167
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=97.17 E-value=0.0003 Score=74.44 Aligned_cols=61 Identities=20% Similarity=0.291 Sum_probs=48.4
Q ss_pred CCCcCCccccccceeEEEEEEc--C-eEEEEEEccCC---CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--H-MQVAIKMLHPH---SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g-~~VAVK~L~~~---~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||+|... + ..||+|.+... .......|.+|+.++ ..++|||||+++
T Consensus 31 ~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l-~~l~hp~Iv~~~ 97 (340)
T PTZ00426 31 DFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKIL-NYINHPFCVNLY 97 (340)
T ss_pred hcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHH-HhCCCCCCcceE
Confidence 4566678999999999999875 2 58999998532 223346788999999 999999999874
No 168
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=97.16 E-value=0.00032 Score=70.82 Aligned_cols=60 Identities=25% Similarity=0.345 Sum_probs=48.1
Q ss_pred CCcCCccccccceeEEEEEEcC-----eEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~g-----~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||+|.... ..|+||...... ......|.+|+.++ .++.||||++++
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l-~~~~h~~i~~~~ 73 (270)
T cd05056 8 ITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIM-RQFDHPHIVKLI 73 (270)
T ss_pred ceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHH-HhCCCCchhcee
Confidence 5556789999999999998742 468999886543 23356799999999 999999999874
No 169
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.16 E-value=0.00037 Score=71.13 Aligned_cols=59 Identities=17% Similarity=0.107 Sum_probs=48.1
Q ss_pred CcCCccccccceeEEEEEEc--CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 531 DPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 531 ~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.....||+|+||.||++... |..||+|.+.... ......|.+|+.++ ..++||||++++
T Consensus 8 ~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l-~~l~h~~i~~~~ 69 (284)
T cd06620 8 ETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIM-HECRSPYIVSFY 69 (284)
T ss_pred HHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHH-HHcCCCCcceEe
Confidence 33457999999999999886 7899999885432 23356799999999 999999999875
No 170
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=97.16 E-value=0.00035 Score=71.03 Aligned_cols=64 Identities=31% Similarity=0.449 Sum_probs=51.1
Q ss_pred hhcCCCcCCccccccceeEEEEEEcC-------eEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 526 ATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 526 aT~~F~~~~~iG~G~~G~Vykg~l~g-------~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++++|...+.||.|+||.||+|.+.+ ..|++|.+..... .....|.+|+.++ .+++||||++++
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~ 75 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIM-SKFNHQNIVRLI 75 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHH-HhCCCCCEeeEE
Confidence 34567777899999999999998853 6789998864332 2345699999999 999999999875
No 171
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=97.16 E-value=0.00042 Score=69.63 Aligned_cols=61 Identities=23% Similarity=0.421 Sum_probs=48.6
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC---CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~---~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||++... |..|+||.+..... .....|.+|+.++ .++.||||++++
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l-~~~~h~~i~~~~ 68 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLL-KQLNHPNVIKYY 68 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHH-HHccCCchhhhh
Confidence 4555678999999999999864 78999998854222 2245789999999 999999999764
No 172
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=97.16 E-value=0.0005 Score=71.09 Aligned_cols=63 Identities=25% Similarity=0.302 Sum_probs=50.3
Q ss_pred hcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC--CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 527 T~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~--~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.++|...+.||.|+||.||+|... |..||+|.+..... .....+.+|+.++ .+++||||++++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~~i~~~~ 72 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLL-LNLRHPNIVELK 72 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHH-HhCCCCCCcceE
Confidence 356777889999999999999985 78999999854322 1233567899999 999999999764
No 173
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=97.16 E-value=0.00052 Score=70.63 Aligned_cols=62 Identities=23% Similarity=0.279 Sum_probs=50.2
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.+|.....||.|+||.||+|... +..|++|.+..........|.+|+.++ .+++|||+++++
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l-~~l~hp~i~~~~ 82 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVM-RENKHPNIVNYL 82 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHH-hhcCCCCeeehh
Confidence 34555678999999999999864 688999998654444456789999999 999999999764
No 174
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=97.16 E-value=0.0005 Score=68.80 Aligned_cols=59 Identities=25% Similarity=0.401 Sum_probs=49.6
Q ss_pred CCCcCCccccccceeEEEEEEcCeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||+|+||.||++...|..||+|.+.... ....|.+|+.++ .+++|||+++++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~--~~~~~~~e~~~l-~~l~~~~i~~~~ 65 (256)
T cd05082 7 ELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVM-TQLRHSNLVQLL 65 (256)
T ss_pred hCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCc--hHHHHHHHHHHH-HhCCCCCeeeEE
Confidence 35556789999999999999999999999985432 346799999999 999999999864
No 175
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=97.15 E-value=0.00039 Score=71.24 Aligned_cols=60 Identities=18% Similarity=0.331 Sum_probs=49.6
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||+|... +..|++|.+..........|.+|+.++ ..+.|||+++++
T Consensus 14 y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 75 (292)
T cd06644 14 WEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEIL-ATCNHPYIVKLL 75 (292)
T ss_pred hhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHH-HhCCCCcEeeeE
Confidence 333457999999999999886 689999999765544567799999999 999999999864
No 176
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=97.15 E-value=0.00049 Score=72.74 Aligned_cols=63 Identities=22% Similarity=0.281 Sum_probs=50.1
Q ss_pred hcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 527 T~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.++|.....||.|+||.||++... |..||||.+.... ......+.+|+.++ .+++||||++++
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~~iv~~~ 80 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLL-KHMKHENVIGLL 80 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHH-HhcCCCCcccee
Confidence 455666778999999999999875 7899999985422 22235688999999 999999999763
No 177
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=97.15 E-value=0.0003 Score=71.94 Aligned_cols=72 Identities=25% Similarity=0.386 Sum_probs=58.8
Q ss_pred ccCHHHHHHhhcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 517 ~~s~~el~~aT~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
-+++.++..++++|.....||.|+||.||++... |..+|+|.+.... .....+.+|+.++ .++ .|||+++++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l-~~l~~h~ni~~~~ 85 (291)
T cd06639 11 MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNIL-QSLPNHPNVVKFY 85 (291)
T ss_pred hhhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHH-HHhcCCCCeEEEE
Confidence 3566777888999999999999999999999885 7899999985432 2245678899999 888 899999864
No 178
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=97.14 E-value=0.00051 Score=68.41 Aligned_cols=60 Identities=30% Similarity=0.398 Sum_probs=50.8
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++|.....||.|+||.||+|... +..|++|.+..... ...|.+|+.++ .+++||||++++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~-~~l~~~~i~~~~ 64 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISIL-KQCDSPYIVKYY 64 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHH-HhCCCCcEeeee
Confidence 45667778999999999999986 68999999865432 67899999999 999999999864
No 179
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=97.14 E-value=0.00056 Score=68.26 Aligned_cols=59 Identities=24% Similarity=0.380 Sum_probs=48.5
Q ss_pred CCcCCccccccceeEEEEEEc-CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~-g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||++... +..+|+|.+... ......|.+|+.++ .++.|||+++++
T Consensus 6 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~-~~~~~~~~~e~~~l-~~l~~~~i~~~~ 65 (256)
T cd05112 6 LTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG-AMSEEDFIEEAQVM-MKLSHPKLVQLY 65 (256)
T ss_pred eEEEeeecCcccceEEEEEEeCCCeEEEEECCCC-CCCHHHHHHHHHHH-HhCCCCCeeeEE
Confidence 444568999999999999886 788999998543 23356799999999 999999999864
No 180
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.14 E-value=0.00034 Score=71.19 Aligned_cols=57 Identities=33% Similarity=0.394 Sum_probs=45.5
Q ss_pred CCccccccceeEEEEEEc-------CeEEEEEEccCCCCC-ChhHHHHHHHHHHcCCCCCCccccc
Q 007740 533 SLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 533 ~~~iG~G~~G~Vykg~l~-------g~~VAVK~L~~~~~~-~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
...||.|+||.||+|... +..||||++...... ....|..|+.++ .+++|||||+++
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~-~~l~h~~iv~~~ 74 (283)
T cd05091 10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMR-SRLQHPNIVCLL 74 (283)
T ss_pred HHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHH-hcCCCCCcCeEE
Confidence 357899999999999874 367999999654322 235689999999 999999999764
No 181
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=97.14 E-value=0.00049 Score=69.30 Aligned_cols=62 Identities=16% Similarity=0.260 Sum_probs=49.6
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC-----CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-----LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~-----~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.+|...+.||.|+||.||+|... |..||+|.+.... ......|.+|+.++ .+++||||++++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l-~~l~h~~i~~~~ 70 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLL-KNLRHDRIVQYY 70 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHH-HHcCCCCcceEE
Confidence 35777789999999999999875 7899999874321 12245789999999 999999999764
No 182
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=97.13 E-value=0.00053 Score=71.70 Aligned_cols=60 Identities=20% Similarity=0.364 Sum_probs=49.0
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+.....||+|.||.||.+... |...|||..........+.+.+|+.+| .+++|||||+.+
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL-~~l~~p~IV~~~ 80 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRIL-SRLNHPNIVQYY 80 (313)
T ss_pred hhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHH-HhCCCCCEEeeC
Confidence 444578999999999999986 789999998554222256689999999 999999999864
No 183
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.13 E-value=0.00059 Score=70.33 Aligned_cols=60 Identities=20% Similarity=0.252 Sum_probs=49.6
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||+|... |..||+|.+..........|.+|+.++ ..++||||++++
T Consensus 22 y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l-~~~~h~~v~~~~ 83 (296)
T cd06654 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM-RENKNPNIVNYL 83 (296)
T ss_pred eeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHH-HhCCCCCEeeEE
Confidence 344457999999999999864 789999999765555567799999999 999999999864
No 184
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=97.13 E-value=0.00068 Score=69.93 Aligned_cols=60 Identities=23% Similarity=0.286 Sum_probs=48.3
Q ss_pred CCcCCccccccceeEEEEEEc----CeEEEEEEccCCC---CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR----HMQVAIKMLHPHS---LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~----g~~VAVK~L~~~~---~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|....+||.|+||.||+|... |..||||.+.... ......+.+|+.++ .+++||||++++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 68 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALL-RELKHENVVSLV 68 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHH-HhcCCCCccceE
Confidence 445568999999999999983 5899999996632 23346788999999 999999999864
No 185
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=97.13 E-value=0.00063 Score=68.08 Aligned_cols=61 Identities=26% Similarity=0.345 Sum_probs=50.2
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|...+.||.|+||.||+|... +..|++|++.... ......|.+|+.++ ..++|||+++++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~ 65 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAM-SQCNHPNVVKYY 65 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHH-HhcCCCCEEEEE
Confidence 5666788999999999999875 6889999986432 23457799999999 999999998764
No 186
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=97.13 E-value=0.00066 Score=68.89 Aligned_cols=60 Identities=25% Similarity=0.258 Sum_probs=48.8
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||+|... |..|+||.+.... ......|.+|+.++ .+++||||++++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l-~~~~~~~i~~~~ 65 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKAL-QACQHPYVVKLL 65 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHH-HhCCCCCCccee
Confidence 344568999999999999985 7899999996543 22346799999999 999999999864
No 187
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=97.13 E-value=0.00045 Score=70.69 Aligned_cols=62 Identities=24% Similarity=0.414 Sum_probs=49.8
Q ss_pred cCCCcCCccccccceeEEEEEEc-------CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~-------g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++|...+.||+|+||.||++... +..+|+|.+..........|.+|+.++ .+++||||++++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 73 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELL-TNLQHEHIVKFY 73 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHH-HhCCCCCcceEE
Confidence 35666788999999999999752 356899998654444456799999999 999999999864
No 188
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=97.12 E-value=0.00069 Score=70.07 Aligned_cols=60 Identities=25% Similarity=0.263 Sum_probs=48.3
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCC---ChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~---~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|...+.||.|+||.||+|... |..||+|.+...... ....|.+|+.++ ..++||||++++
T Consensus 17 y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l-~~l~h~niv~~~ 81 (307)
T cd06607 17 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFL-QQLRHPNTIEYK 81 (307)
T ss_pred hhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHH-HhCCCCCEEEEE
Confidence 555678999999999999875 789999998543222 235688999999 999999999864
No 189
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=97.12 E-value=0.00042 Score=71.22 Aligned_cols=61 Identities=23% Similarity=0.341 Sum_probs=47.3
Q ss_pred CCCcCCccccccceeEEEEEEcC----------------eEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLRH----------------MQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~g----------------~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.|.....||+|+||.||.+...+ ..||||.++.... .....|.+|+.++ .+++||||++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l-~~l~h~~i~~~~ 83 (295)
T cd05097 6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIM-SRLKNPNIIRLL 83 (295)
T ss_pred hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHH-HhCCCCCcCeEE
Confidence 35555689999999999886532 2589999976432 2345799999999 999999999874
No 190
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=97.12 E-value=0.00058 Score=69.93 Aligned_cols=62 Identities=29% Similarity=0.392 Sum_probs=50.1
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC--CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~--~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++|.....||.|+||.||+|... |..||||.+..... .....|.+|+.++ .+++||||++++
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 67 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLL-KEMQHGNIVRLQ 67 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHH-HhccCCCEeeEE
Confidence 35666778999999999999875 78999999854322 2346789999999 999999999864
No 191
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.12 E-value=0.0005 Score=70.93 Aligned_cols=60 Identities=20% Similarity=0.272 Sum_probs=49.6
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||+|... |..|+||.+..........|.+|+.++ ..++|||+++++
T Consensus 21 y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l-~~l~h~~iv~~~ 82 (296)
T cd06655 21 YTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVM-KELKNPNIVNFL 82 (296)
T ss_pred EEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHH-HhcCCCceeeee
Confidence 445568999999999999864 789999999655444567789999999 999999999764
No 192
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=97.12 E-value=0.0003 Score=71.41 Aligned_cols=57 Identities=26% Similarity=0.390 Sum_probs=46.4
Q ss_pred CCccccccceeEEEEEEc--CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 533 SLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 533 ~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
...||.|+||.||+|... |..||+|.+.... ......|.+|+.++ .+++||||++++
T Consensus 9 ~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 68 (277)
T cd06642 9 LERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVL-SQCDSPYITRYY 68 (277)
T ss_pred HHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHH-HcCCCCccHhhh
Confidence 346899999999999875 6899999986432 23345789999999 999999999864
No 193
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.12 E-value=0.00044 Score=73.67 Aligned_cols=59 Identities=25% Similarity=0.365 Sum_probs=48.6
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCcccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDS 589 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~l 589 (591)
|.....||+|.||.||||... +..||||+++-.. ....++.++|+.+| ++++|+||...
T Consensus 15 ~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~L-s~~~~~~it~y 76 (467)
T KOG0201|consen 15 YTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVL-SQCDSPNITEY 76 (467)
T ss_pred cccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHH-HhcCcchHHhh
Confidence 334458999999999999987 7899999997643 34467889999999 99999999654
No 194
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=97.12 E-value=0.00079 Score=67.65 Aligned_cols=60 Identities=25% Similarity=0.452 Sum_probs=47.3
Q ss_pred CCcCCccccccceeEEEEEEc-CeEEEEEEccCCCCC------ChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQ------GPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~-g~~VAVK~L~~~~~~------~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||+|... |..||||.+...... ....|.+|+.++ .+++||||++++
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~ 68 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLL-KSLKHVNIVQYL 68 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHH-HhcCCCCEeeEe
Confidence 344568999999999999875 789999988543211 135688999999 999999999764
No 195
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=97.12 E-value=0.00054 Score=68.26 Aligned_cols=60 Identities=18% Similarity=0.257 Sum_probs=48.1
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|...+.||.|+||.||++... |..||+|.+.... ......|..|+.++ .+++||||++++
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~ 65 (265)
T cd08217 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNIL-RELKHPNIVRYY 65 (265)
T ss_pred ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHH-HhcCCCccceee
Confidence 445578999999999999875 7899999986432 22345688999999 999999999864
No 196
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=97.12 E-value=0.00067 Score=68.67 Aligned_cols=58 Identities=28% Similarity=0.308 Sum_probs=47.6
Q ss_pred cCCccccccceeEEEEEEc--CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 532 PSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 532 ~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
....||.|+||.||+|... |..||+|.+.... ......|.+|+.++ .+++|||+++++
T Consensus 3 ~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~ 64 (287)
T cd07840 3 KIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLL-QKLRHPNIVRLK 64 (287)
T ss_pred eeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHH-HhccCCCeeehe
Confidence 3457999999999999886 6899999997643 22345688999999 999999999764
No 197
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=97.12 E-value=0.00065 Score=67.86 Aligned_cols=61 Identities=16% Similarity=0.215 Sum_probs=51.4
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||++... |..|+||++..... .....|.+|+.++ .+++||||++++
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~ 65 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTL-RSCESPYVVKCY 65 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHH-HhcCCCCeeeEE
Confidence 5666789999999999999886 78999999866443 3457899999999 999999999874
No 198
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=97.11 E-value=0.00053 Score=69.79 Aligned_cols=56 Identities=21% Similarity=0.384 Sum_probs=47.1
Q ss_pred CccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 534 ~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
..||.|+||.||+|... +..+++|.+..........|.+|+.++ ..++||||++++
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l-~~l~h~~ii~~~ 68 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDIL-ASCDHPNIVKLL 68 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHH-HHCCCCCeeeEE
Confidence 47999999999999986 678899998654444456799999999 999999999864
No 199
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=97.11 E-value=0.0006 Score=67.38 Aligned_cols=60 Identities=22% Similarity=0.360 Sum_probs=50.4
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC--CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~--~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||+|... +..|++|.+..... .....|.+|+.++ .++.||||++++
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~ 65 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRIL-SSLQHPNIVRYY 65 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHH-HHcCCCCEeeEE
Confidence 556678999999999999987 78999999865432 3457799999999 999999999864
No 200
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=97.11 E-value=0.00062 Score=68.10 Aligned_cols=60 Identities=23% Similarity=0.378 Sum_probs=49.3
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCC--ChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~--~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||+|... +..|++|.+...... ....|.+|+.++ .+++||||++++
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~-~~l~~~~i~~~~ 65 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVL-ELLKHPNLVKYY 65 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHH-HhCCCCChhhee
Confidence 444578999999999999875 789999998654332 457789999999 999999999865
No 201
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=97.10 E-value=0.00045 Score=72.64 Aligned_cols=61 Identities=16% Similarity=0.181 Sum_probs=49.0
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCC---CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~---~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||+|+||.||++... +..||||++... .......|.+|+.++ ..++||||+.++
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l-~~~~~~~i~~~~ 67 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVL-VNGDRRWITNLH 67 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHH-HhCCCCCCCceE
Confidence 4566678999999999999886 789999998642 122345688999999 999999999864
No 202
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=97.10 E-value=0.00047 Score=72.42 Aligned_cols=63 Identities=22% Similarity=0.338 Sum_probs=49.8
Q ss_pred hcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCC--CCCChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 527 T~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
.++|.....||.|+||.||+|... |..||||++... .......+.+|+.++ .++ +||||++++
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l-~~l~~h~ni~~~~ 73 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFL-QELGDHPNIVKLL 73 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHH-HHhcCCCCcccee
Confidence 345666678999999999999885 789999998542 223345678899999 999 999999864
No 203
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=97.09 E-value=0.00044 Score=73.64 Aligned_cols=61 Identities=18% Similarity=0.223 Sum_probs=49.5
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC---CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~---~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||++... |..||||++.... ......+..|+.++ .++.|||||+++
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il-~~~~~~~iv~~~ 67 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDIL-VEADSLWVVKMF 67 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHH-HhCCCCCcceEE
Confidence 5777789999999999999875 7899999995421 22245678899999 999999999864
No 204
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=97.09 E-value=0.00042 Score=70.65 Aligned_cols=58 Identities=16% Similarity=0.193 Sum_probs=46.8
Q ss_pred cCCccccccceeEEEEEEc--CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCC-CCCccccc
Q 007740 532 PSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIF-HFNLVDSF 590 (591)
Q Consensus 532 ~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lr-HpNLV~li 590 (591)
....||.|+||.||++... |..||||.+.... ......|.+|+.++ .++. |||||+++
T Consensus 8 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l-~~~~~~~~iv~~~ 69 (288)
T cd06616 8 DLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVV-MRSSDCPYIVKFY 69 (288)
T ss_pred HHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHH-HHhcCCCCEeeee
Confidence 3457999999999999886 7899999986532 23346789999999 8886 99999864
No 205
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=97.09 E-value=0.00034 Score=74.96 Aligned_cols=68 Identities=18% Similarity=0.255 Sum_probs=53.1
Q ss_pred HHHHhhcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCC---CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 522 EIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 522 el~~aT~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~---~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++....++|.....||+|+||.||++... +..||+|.+... .......|.+|+.++ ..++||||++++
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~-~~~~hp~iv~~~ 109 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSPWVVQLF 109 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHH-HhCCCCCCCeEE
Confidence 34444567777889999999999999886 689999998531 122345588999999 999999999874
No 206
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=97.09 E-value=0.00096 Score=67.03 Aligned_cols=60 Identities=23% Similarity=0.376 Sum_probs=47.1
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCC---------hhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---------PSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~---------~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||+|... +..||+|.+....... ...|.+|+.++ .+++||||++++
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 72 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALL-KELQHENIVQYL 72 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHH-HhcCCCCeeeEE
Confidence 334568999999999999874 6899999885532221 24688999999 999999999864
No 207
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=97.08 E-value=0.00094 Score=68.15 Aligned_cols=61 Identities=28% Similarity=0.371 Sum_probs=44.7
Q ss_pred CCCcCCccccccceeEEEEEEc---CeEEEEEEccCCCC--CChhHHHHHHHHHHcCC---CCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHSL--QGPSEFQQEVGAYESFI---FHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~---g~~VAVK~L~~~~~--~~~~~F~~Ev~il~s~l---rHpNLV~li 590 (591)
.|.....||+|+||.||++... |..||||.+..... .....+.+|+.++ ..+ .||||++++
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l-~~l~~~~hpniv~~~ 70 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL-RHLETFEHPNVVRLF 70 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHH-HhhcccCCCCcceEE
Confidence 3555678999999999999863 57899999864322 2234567787776 654 799999864
No 208
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=97.08 E-value=0.00071 Score=69.92 Aligned_cols=61 Identities=28% Similarity=0.449 Sum_probs=47.4
Q ss_pred CCCcCCccccccceeEEEEEEc--C----eEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--H----MQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g----~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||+|... | ..||+|.+..... .....|.+|+.++ .++.||||++++
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~-~~l~h~niv~~~ 75 (303)
T cd05110 8 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM-ASMDHPHLVRLL 75 (303)
T ss_pred hceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHH-HhCCCCCcccEE
Confidence 3555678999999999999874 4 3589998865432 2234689999999 999999999864
No 209
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=97.08 E-value=0.00056 Score=68.72 Aligned_cols=60 Identities=25% Similarity=0.434 Sum_probs=49.1
Q ss_pred CCCcCCccccccceeEEEEEEc-CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~-g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.|...+.||+|+||.||++... +..|++|.+.... .....|.+|+.++ .+++|+|++++.
T Consensus 7 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l-~~l~~~~i~~~~ 67 (260)
T cd05073 7 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVM-KTLQHDKLVKLH 67 (260)
T ss_pred ceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHH-HhcCCCCcceEE
Confidence 3555678999999999999876 6789999886532 2346799999999 999999999864
No 210
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=97.08 E-value=0.00075 Score=68.98 Aligned_cols=61 Identities=25% Similarity=0.343 Sum_probs=48.8
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCC-CCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIF-HFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lr-HpNLV~li 590 (591)
+|.....||.|+||.||+|... |..||||.+.... ......|.+|+.++ .+++ ||||++++
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l-~~l~~~~~i~~~~ 67 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLL-QMLSESIYIVRLL 67 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHH-HHccCCCCcccee
Confidence 5677789999999999999986 7899999885432 22345788999999 8885 69999764
No 211
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=97.08 E-value=0.00049 Score=72.02 Aligned_cols=61 Identities=18% Similarity=0.155 Sum_probs=49.8
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC---CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~---~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||+|+||.||++... |..||||.+.... ......|..|+.++ ..++||||++++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~-~~~~~~~i~~~~ 67 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDIL-SISNSPWIPQLQ 67 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHH-HhCCCCCCccee
Confidence 5666789999999999999875 7899999996532 22346688999999 999999999864
No 212
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=97.07 E-value=0.00063 Score=69.63 Aligned_cols=62 Identities=24% Similarity=0.286 Sum_probs=49.0
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC--CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~--~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++|.....||.|+||.||+|... +..|+||.+..... .....+.+|+.++ .+++||||++++
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l-~~l~h~ni~~~~ 70 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINIL-LKLQHPNIVTVK 70 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHH-HhcCCCCEEEEE
Confidence 34566678999999999999986 78999999954322 2234578899999 999999999764
No 213
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=97.07 E-value=0.00066 Score=69.23 Aligned_cols=64 Identities=28% Similarity=0.320 Sum_probs=52.6
Q ss_pred HhhcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 525 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 525 ~aT~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
..+++|.....||.|+||.||+|... +..|++|.+..... ....|..|+.++ .+++|||+++++
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l-~~l~~~~i~~~~ 81 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIM-KDCKHPNIVDYY 81 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHH-HHCCCCCeeEEE
Confidence 34455666678999999999999987 78999999965433 456799999999 999999999764
No 214
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=97.06 E-value=0.00071 Score=69.75 Aligned_cols=55 Identities=27% Similarity=0.294 Sum_probs=47.0
Q ss_pred ccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 535 ~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+||+|+||.||++... |..||||.+..........|.+|+.++ .+++|||+++++
T Consensus 27 ~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l-~~l~h~~iv~~~ 83 (292)
T cd06657 27 KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIM-RDYQHENVVEMY 83 (292)
T ss_pred HcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHH-HhcCCcchhhee
Confidence 7899999999999885 789999998654444556799999999 999999999864
No 215
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=97.06 E-value=0.00059 Score=73.57 Aligned_cols=61 Identities=23% Similarity=0.415 Sum_probs=50.3
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCC---hhHHHHHHHHHHcCCC-CCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEVGAYESFIF-HFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~---~~~F~~Ev~il~s~lr-HpNLV~li 590 (591)
.|.....||.|.||.||++... |..+|+|.+......+ ...+.+|+.|| .++. |||+|.|.
T Consensus 36 ~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il-~~l~~hpniv~l~ 102 (382)
T KOG0032|consen 36 KYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAIL-QQLSGHPNIVQLK 102 (382)
T ss_pred cEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHH-HhccCCCCEEEEE
Confidence 3445578999999999999887 7899999996654433 35889999999 9998 99999874
No 216
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=97.06 E-value=0.0008 Score=70.63 Aligned_cols=61 Identities=21% Similarity=0.284 Sum_probs=50.4
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCcccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDS 589 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~l 589 (591)
.+|.....||.|+||.||+|... |..||+|++.... ......+.+|+.++ .+++|||||++
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~iv~~ 69 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKIL-RHFKHDNIIAI 69 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHH-HhcCCCCccCH
Confidence 56777788999999999999875 7899999986532 23356788899999 99999999975
No 217
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=97.06 E-value=0.00055 Score=69.08 Aligned_cols=61 Identities=25% Similarity=0.334 Sum_probs=48.0
Q ss_pred CCCcCCccccccceeEEEEEEc-----CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~-----g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|...+.||.|+||.||+|... +..||+|.+.... ......|..|+.++ .+++||||++++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 71 (267)
T cd05066 5 CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIM-GQFDHPNIIHLE 71 (267)
T ss_pred HeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHH-HhCCCCCcceEE
Confidence 4555678999999999999874 2479999986532 22346799999999 999999999864
No 218
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=97.05 E-value=0.00046 Score=70.09 Aligned_cols=61 Identities=34% Similarity=0.444 Sum_probs=48.0
Q ss_pred CCCcCCccccccceeEEEEEEcC-------eEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~g-------~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||+|+||.||+|...+ ..||+|.+..... .....|.+|+.++ .+++||||++++
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l-~~l~h~~i~~~~ 74 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELM-SDLQHPNIVCLL 74 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHH-HhcCCcccceEE
Confidence 34556689999999999998752 5699999865332 2245699999999 999999999864
No 219
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=97.05 E-value=0.00089 Score=80.73 Aligned_cols=65 Identities=22% Similarity=0.265 Sum_probs=50.1
Q ss_pred cCHHHHHHhhcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 518 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 518 ~s~~el~~aT~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+++.++. ..|...+.||+|+||.||+|... |..||||.+..... ....|+.++ .+++|||||+++
T Consensus 683 ~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l-~~l~HpnIv~~~ 749 (968)
T PLN00113 683 ITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADM-GKLQHPNIVKLI 749 (968)
T ss_pred hhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHH-hhCCCCCcceEE
Confidence 4555554 34677789999999999999974 78999999864322 123568899 999999999875
No 220
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=97.04 E-value=0.00085 Score=68.40 Aligned_cols=60 Identities=25% Similarity=0.269 Sum_probs=46.1
Q ss_pred CCcCCccccccceeEEEEEEc--Ce----EEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HM----QVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~----~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|...+.||.|+||.||+|.+. |. .|++|.+..... .....|..|+.++ .++.|||||+++
T Consensus 9 ~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l-~~l~h~~iv~~~ 75 (279)
T cd05111 9 LRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAM-GSLDHAYIVRLL 75 (279)
T ss_pred ceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHH-hcCCCCCcceEE
Confidence 455578999999999999884 43 588888854322 2246788899899 999999999864
No 221
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=97.04 E-value=0.00083 Score=68.98 Aligned_cols=62 Identities=23% Similarity=0.366 Sum_probs=49.0
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++|....+||.|+||.||++... |..||||.+.... ......+.+|+.++ .+++||||++++
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~iv~~~ 77 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKIL-QLLKHENVVNLI 77 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHH-HhCCCCCccceE
Confidence 35666788999999999999886 7899999885432 22234567899999 999999999764
No 222
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=97.04 E-value=0.00043 Score=69.85 Aligned_cols=60 Identities=25% Similarity=0.351 Sum_probs=47.5
Q ss_pred CCcCCccccccceeEEEEEEc--C---eEEEEEEccCC-CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--H---MQVAIKMLHPH-SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g---~~VAVK~L~~~-~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||+|... + ..||||.+... .......|..|+.++ .++.||||++++
T Consensus 6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l-~~l~h~ni~~~~ 71 (269)
T cd05065 6 VKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM-GQFDHPNIIHLE 71 (269)
T ss_pred eEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHH-HhCCCcCcceEE
Confidence 344568999999999999885 3 36999998653 222346799999999 999999999864
No 223
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=97.04 E-value=0.00066 Score=71.41 Aligned_cols=62 Identities=21% Similarity=0.271 Sum_probs=49.8
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCC--CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+.|.....||.|+||.||++... |..||||.+... .......+.+|+.++ ..++||||++++
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~ni~~~~ 70 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLL-RHLDHENVIAIK 70 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHH-HhcCCCCccchH
Confidence 35666778999999999999875 789999998653 223345678999999 999999999763
No 224
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=97.04 E-value=0.00062 Score=69.13 Aligned_cols=61 Identities=25% Similarity=0.255 Sum_probs=49.9
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCC--CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||+|... +..||||.+... .......|.+|+.++ .++.||||++++
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~ 66 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVL-RQLRHENIVNLK 66 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHH-HhcCCCCeeehh
Confidence 4556678999999999999986 689999998643 223356799999999 999999999864
No 225
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=97.03 E-value=0.00038 Score=72.68 Aligned_cols=62 Identities=21% Similarity=0.293 Sum_probs=51.4
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC---CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~---~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++|...++||+|+||.||...-. ++.+|+|+|..... ........|..|| .+++||.||.|+
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL-~~v~hPFiv~l~ 91 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNIL-SKIKHPFIVKLI 91 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHH-HhCCCCcEeeeE
Confidence 56888899999999999988775 78999999966322 2345678999999 999999999875
No 226
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=97.03 E-value=0.00085 Score=67.24 Aligned_cols=59 Identities=27% Similarity=0.432 Sum_probs=47.6
Q ss_pred CCcCCccccccceeEEEEEEc-CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~-g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||+|... +..+|+|.+.... .....|.+|+.++ .+++||||++++
T Consensus 6 ~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l-~~l~~~~i~~~~ 65 (256)
T cd05059 6 LTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVM-MKLSHPNLVQLY 65 (256)
T ss_pred cchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHH-HhCCCCCEEEEE
Confidence 444568999999999999887 5689999985432 2346799999999 999999999764
No 227
>PHA03211 serine/threonine kinase US3; Provisional
Probab=97.02 E-value=0.00056 Score=75.71 Aligned_cols=56 Identities=13% Similarity=0.112 Sum_probs=46.7
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.+|.....||.|+||.||++... +..||||... ...+.+|+.+| .+++|||||+++
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL-~~L~HpnIv~l~ 226 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLL-RRLSHPAVLALL 226 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHH-HHCCCCCCCcEE
Confidence 45666778999999999999987 6889999642 23478999999 999999999875
No 228
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=97.02 E-value=0.00074 Score=68.13 Aligned_cols=59 Identities=22% Similarity=0.310 Sum_probs=45.8
Q ss_pred CcCCccccccceeEEEEEEc--CeEEEEEEccCCCC---C-------ChhHHHHHHHHHHcCCCCCCccccc
Q 007740 531 DPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---Q-------GPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 531 ~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~---~-------~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.....||.|+||.||+|... |..||||.+..... . ..+.|.+|+.++ .+++|||+++++
T Consensus 4 ~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 74 (272)
T cd06629 4 VKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETL-KDLDHLNIVQYL 74 (272)
T ss_pred eecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHH-HhcCCCCcceEE
Confidence 34568999999999999864 78999998853211 1 124578899999 999999999864
No 229
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=97.02 E-value=0.00069 Score=70.53 Aligned_cols=60 Identities=27% Similarity=0.261 Sum_probs=48.5
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCC---ChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~---~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|...+.||.|+||.||++... |..||+|.+...... ....|.+|+.++ .+++|||+|+++
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~iv~~~ 91 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFL-QRIKHPNSIEYK 91 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHH-HhCCCCCEEEEE
Confidence 556678999999999999875 789999998643222 235688999999 999999999764
No 230
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=97.02 E-value=0.00064 Score=68.14 Aligned_cols=61 Identities=16% Similarity=0.146 Sum_probs=49.5
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||++... +..|++|.+.... ......|.+|+.++ .+++||||++++
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l-~~~~~~~i~~~~ 65 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDIL-HKCNSPYIVGFY 65 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHH-HHCCCCchhhhh
Confidence 3445568999999999999987 7899999986543 23456799999999 999999998764
No 231
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=97.01 E-value=0.00068 Score=69.34 Aligned_cols=61 Identities=25% Similarity=0.345 Sum_probs=48.4
Q ss_pred CCCcCCccccccceeEEEEEEcC------------------eEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCcccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLRH------------------MQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDS 589 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~g------------------~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~l 589 (591)
.|.....||+|+||.||++...+ ..||+|.+..... .....|.+|+.++ .+++||||+++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~ 84 (296)
T cd05051 6 PLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKIL-SRLSDPNIARL 84 (296)
T ss_pred hCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHH-HhcCCCCEeEE
Confidence 45566789999999999987642 4589999865432 3356799999999 99999999986
Q ss_pred c
Q 007740 590 F 590 (591)
Q Consensus 590 i 590 (591)
+
T Consensus 85 ~ 85 (296)
T cd05051 85 L 85 (296)
T ss_pred E
Confidence 4
No 232
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.01 E-value=0.00071 Score=72.76 Aligned_cols=63 Identities=17% Similarity=0.305 Sum_probs=49.4
Q ss_pred hcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCC----CC-CChhHHHHHHHHHHcCCC-CCCccccc
Q 007740 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH----SL-QGPSEFQQEVGAYESFIF-HFNLVDSF 590 (591)
Q Consensus 527 T~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~----~~-~~~~~F~~Ev~il~s~lr-HpNLV~li 590 (591)
..+|.....||+|+||.||.|... |..||||++... .. .......+|+.++ .+++ ||||++++
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~-~~~~~HpnI~~l~ 86 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISIL-RRLRSHPNIIRLL 86 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHH-HHhccCCCEeEEE
Confidence 445666788999999999999875 899999977553 11 2234566899999 9999 99999874
No 233
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=97.01 E-value=0.00088 Score=66.66 Aligned_cols=60 Identities=17% Similarity=0.279 Sum_probs=48.7
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||++... +..+|||.+.... ......|.+|+.++ .+++||||++++
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l-~~~~~~~i~~~~ 65 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVL-KLLSHPNIIEYY 65 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHH-hhCCCCchhhee
Confidence 555678999999999998875 7899999986532 23356799999999 999999998764
No 234
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=97.00 E-value=0.00063 Score=72.30 Aligned_cols=61 Identities=18% Similarity=0.193 Sum_probs=49.6
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCC---CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~---~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||++... |..||||++... .......|..|+.++ ..++||||++++
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l-~~l~~~~iv~~~ 67 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDIL-VEADGAWVVKMF 67 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHH-HhCCCCCEeeEE
Confidence 5666788999999999999886 789999999642 122345688899999 999999999864
No 235
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=97.00 E-value=0.00085 Score=68.74 Aligned_cols=60 Identities=22% Similarity=0.241 Sum_probs=47.7
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC---CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~---~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||+|+||.||++... +..||||.+..... .....+.+|+.++ .+++|+|++.++
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il-~~l~~~~i~~~~ 66 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQIL-EKVNSRFVVSLA 66 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHH-HhCCCCCeeeee
Confidence 445568999999999999886 68999999865322 2234578899999 999999999764
No 236
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=96.99 E-value=0.00093 Score=69.25 Aligned_cols=61 Identities=18% Similarity=0.227 Sum_probs=50.4
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCC---ChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~---~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||++... +..||||.+...... ....|..|+.++ .++.||||++++
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~ 67 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEIL-ATLDHPFLPTLY 67 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHH-HhCCCCCchhhe
Confidence 4666778999999999999886 689999999654322 346789999999 999999999875
No 237
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=96.99 E-value=0.00053 Score=70.59 Aligned_cols=56 Identities=30% Similarity=0.331 Sum_probs=47.0
Q ss_pred CccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 534 ~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
..||.|+||.||++... +..||||.+..........|.+|+.++ .+++||||++++
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l-~~l~h~~ii~~~ 85 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIM-RDYHHENVVDMY 85 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHH-HhCCCCcHHHHH
Confidence 46999999999999875 789999998654444456799999999 999999998764
No 238
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=96.98 E-value=0.00091 Score=67.17 Aligned_cols=59 Identities=31% Similarity=0.509 Sum_probs=47.8
Q ss_pred CCcCCccccccceeEEEEEEc-CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~-g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||++... +..||+|.+.... .....|.+|+.++ .++.|||+++++
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l-~~l~h~~i~~~~ 67 (260)
T cd05069 8 LRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIM-KKLRHDKLVPLY 67 (260)
T ss_pred eeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHH-HhCCCCCeeeEE
Confidence 444568999999999999887 4579999986543 2346799999999 999999999763
No 239
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=96.98 E-value=0.00025 Score=74.62 Aligned_cols=56 Identities=20% Similarity=0.368 Sum_probs=46.5
Q ss_pred CccccccceeEEEEEEc--CeEEEEEEccCCCCCC---hhHHHHHHHHHHcCCCCCCccccc
Q 007740 534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 534 ~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~---~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
..||.|.||.|-++.-+ |..||||.+..+.... .-...+|++|| +.++||||+.++
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIM-SsLNHPhII~Iy 119 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIM-SSLNHPHIIQIY 119 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHH-hhcCCCceeehh
Confidence 46999999999999764 8999999997765443 34468999999 999999998764
No 240
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=96.98 E-value=0.00072 Score=69.27 Aligned_cols=61 Identities=21% Similarity=0.267 Sum_probs=49.3
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC---CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~---~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||++... +..||+|.+.... ......|.+|+.++ .++.||||++++
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 67 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRIL-QSIRHPFLVNLY 67 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHH-HhCCCCCcccee
Confidence 4555678999999999999885 6899999985422 22346789999999 999999999864
No 241
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=96.98 E-value=0.00087 Score=68.08 Aligned_cols=60 Identities=32% Similarity=0.450 Sum_probs=47.6
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||++... |..||+|.+.... ......+.+|+.++ .+++||||++++
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l-~~l~h~~i~~~~ 65 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLL-KELKHKNIVRLY 65 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHH-HhcCCCCeeeHH
Confidence 444567999999999999985 7899999985432 12235688899999 999999999764
No 242
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=96.97 E-value=0.0012 Score=65.04 Aligned_cols=60 Identities=30% Similarity=0.473 Sum_probs=51.1
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||++... |..|++|++..........|.+|+..+ .+++|||+++++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~ 63 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQIL-KKCKHPNIVKYY 63 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHH-HhCCCCCEeEEE
Confidence 555678999999999999986 789999999765544567899999999 999999998764
No 243
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=96.97 E-value=0.001 Score=65.87 Aligned_cols=60 Identities=28% Similarity=0.399 Sum_probs=49.4
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC--CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~--~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||++... +..|++|.+..... .....|.+|+.++ .+++|||+++++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~ 65 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLL-KNLKHPNIVKYI 65 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHH-HhCCCCCccEEE
Confidence 455678999999999999875 68999999966443 3456799999999 999999998764
No 244
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=96.96 E-value=0.00069 Score=70.11 Aligned_cols=62 Identities=26% Similarity=0.433 Sum_probs=49.2
Q ss_pred cCCCcCCccccccceeEEEEEEc-------CeEEEEEEccCCCC-CChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~-------g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
++|...+.||.|+||.||++... +..||||++..... .....|.+|+.++ .++ +||||++++
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l-~~l~~h~~iv~~~ 105 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIM-SHLGNHENIVNLL 105 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHH-HhccCCCCcceEE
Confidence 46777889999999999999751 35799999865322 2245699999999 999 899999875
No 245
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=96.96 E-value=0.00096 Score=68.05 Aligned_cols=60 Identities=25% Similarity=0.362 Sum_probs=47.9
Q ss_pred CCcCCccccccceeEEEEEEc------CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~------g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||+|+||.||.+.+. +..||+|.+.... ......|.+|+.++ .++.||||++++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 72 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEIL-RNLYHENIVKYK 72 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHH-HhCCCCCeeeee
Confidence 444568999999999999752 5789999996543 23346799999999 999999999763
No 246
>PHA03209 serine/threonine kinase US3; Provisional
Probab=96.96 E-value=0.00082 Score=71.53 Aligned_cols=56 Identities=11% Similarity=0.052 Sum_probs=45.7
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.+|.....||+|+||.||+|... +..||+|..... .+..|+.++ .+++|||||+++
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l-~~l~h~~iv~~~ 123 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLL-QNVNHPSVIRMK 123 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHH-HhCCCCCCcChh
Confidence 35666778999999999999987 578999975332 345799999 999999999875
No 247
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=96.95 E-value=0.00075 Score=68.57 Aligned_cols=61 Identities=21% Similarity=0.321 Sum_probs=47.8
Q ss_pred CCCcCCccccccceeEEEEEEc--Ce----EEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HM----QVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~----~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|....+||.|+||.||+|... |. .||+|.+..... .....|.+|+.++ ..+.||||+.++
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l-~~~~~~~i~~~~ 75 (279)
T cd05109 8 ELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVM-AGVGSPYVCRLL 75 (279)
T ss_pred heeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHH-HhcCCCCCceEE
Confidence 4556678999999999999864 43 589999865332 2356789999999 999999998764
No 248
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=96.95 E-value=0.00082 Score=68.29 Aligned_cols=71 Identities=23% Similarity=0.381 Sum_probs=56.2
Q ss_pred cCHHHHHHhhcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 518 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 518 ~s~~el~~aT~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
.++.++..+...|.....||.|+||.||+|... +..||+|.+.... .....|..|+.++ .++ +||||++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l-~~~~~h~~i~~~~ 79 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINML-KKYSHHRNIATYY 79 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHH-HHhcCCCcEEEEe
Confidence 355666667777888889999999999999985 7899999985432 2345788999999 887 799999764
No 249
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=96.95 E-value=0.00052 Score=71.32 Aligned_cols=56 Identities=32% Similarity=0.450 Sum_probs=45.7
Q ss_pred CccccccceeEEEEEEc--CeEEEEEEccCCCC-CC-hhHHHHHHHHHHcCCCCCC-ccccc
Q 007740 534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QG-PSEFQQEVGAYESFIFHFN-LVDSF 590 (591)
Q Consensus 534 ~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~-~~-~~~F~~Ev~il~s~lrHpN-LV~li 590 (591)
.+||+|.||.||+|... |..||+|++.-... .+ ...-.+|+.++ .+++|+| ||.|.
T Consensus 17 eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisll-k~L~~~~~iv~L~ 77 (323)
T KOG0594|consen 17 EKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLL-KRLSHANHIVRLH 77 (323)
T ss_pred HHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHH-HHhCCCcceEEEE
Confidence 46999999999999886 88999999965433 22 34458999999 9999999 98774
No 250
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=96.95 E-value=0.00052 Score=76.63 Aligned_cols=60 Identities=20% Similarity=0.321 Sum_probs=43.4
Q ss_pred hhcCCCcCCccccccceeEEEEEE------------------cCeEEEEEEccCCCCCChhHHH--------------HH
Q 007740 526 ATHNFDPSLKIGEGGYGSIYKGLL------------------RHMQVAIKMLHPHSLQGPSEFQ--------------QE 573 (591)
Q Consensus 526 aT~~F~~~~~iG~G~~G~Vykg~l------------------~g~~VAVK~L~~~~~~~~~~F~--------------~E 573 (591)
.+++|...++||+|+||.||+|.+ .+..||||++..........|. .|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999974 1467999999654333333444 46
Q ss_pred HHHHHcCCCCCCc
Q 007740 574 VGAYESFIFHFNL 586 (591)
Q Consensus 574 v~il~s~lrHpNL 586 (591)
+..+ .+++|.|+
T Consensus 223 ~~~l-~~l~~~~l 234 (507)
T PLN03224 223 AYMC-AKIKRNPI 234 (507)
T ss_pred HHHH-HHhhcccc
Confidence 6666 66766665
No 251
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=96.94 E-value=0.0008 Score=68.84 Aligned_cols=63 Identities=21% Similarity=0.363 Sum_probs=48.6
Q ss_pred hcCCCcCCccccccceeEEEEEEc-------CeEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 527 THNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 527 T~~F~~~~~iG~G~~G~Vykg~l~-------g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++.|.....||.|+||.||+|... +..||+|.+..... .....|.+|+.++ .+++||||++++
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~ 75 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM-KGFTCHHVVRLL 75 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHH-HhCCCCCeeeEE
Confidence 345666678999999999999753 35799999864322 2235688999999 999999999875
No 252
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=96.94 E-value=0.00072 Score=69.46 Aligned_cols=62 Identities=23% Similarity=0.329 Sum_probs=47.9
Q ss_pred cCCCcCCccccccceeEEEEEEc------------------CeEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR------------------HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVD 588 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~------------------g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~ 588 (591)
++|.....||+|+||.||++... +..||+|.+..... .....|.+|+.++ .+++||||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l-~~l~~~~i~~ 83 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIM-SRLKDPNIIR 83 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHH-HhCCCCCcce
Confidence 34666678999999999987532 24689999965432 2346799999999 9999999987
Q ss_pred cc
Q 007740 589 SF 590 (591)
Q Consensus 589 li 590 (591)
++
T Consensus 84 ~~ 85 (296)
T cd05095 84 LL 85 (296)
T ss_pred EE
Confidence 64
No 253
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=96.93 E-value=0.0009 Score=67.99 Aligned_cols=60 Identities=25% Similarity=0.403 Sum_probs=48.2
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCC-CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH-SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~-~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||+|... +..||||.+... .......|.+|+.++ .+++||||++++
T Consensus 6 y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 68 (277)
T cd06640 6 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVL-SQCDSPYVTKYY 68 (277)
T ss_pred hhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHH-HhCCCCCEeeEE
Confidence 444568999999999999875 789999998543 223356789999999 999999999764
No 254
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=96.93 E-value=0.0011 Score=67.40 Aligned_cols=59 Identities=24% Similarity=0.328 Sum_probs=46.5
Q ss_pred CcCCccccccceeEEEEEEc------CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 531 DPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 531 ~~~~~iG~G~~G~Vykg~l~------g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.....||.|+||.||.+.+. +..||+|.+.... ......|.+|+.++ .+++||||++++
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l-~~l~h~~i~~~~ 72 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINIL-KTLYHENIVKYK 72 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHH-HhCCCCCEeeEE
Confidence 44568999999999886542 5789999996543 23456789999999 999999999864
No 255
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=96.92 E-value=0.00083 Score=67.43 Aligned_cols=64 Identities=28% Similarity=0.349 Sum_probs=52.7
Q ss_pred HhhcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 525 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 525 ~aT~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
.++++|.....||.|+||.||+|... +..+++|.+..... ....|.+|+.++ .++ .||||++++
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l-~~~~~h~~i~~~~ 69 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNIL-RKYSNHPNIATFY 69 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHH-HHhcCCCChheEE
Confidence 45677888889999999999999986 67899999865432 346799999999 888 799999864
No 256
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=96.92 E-value=0.0015 Score=68.34 Aligned_cols=66 Identities=18% Similarity=0.178 Sum_probs=53.3
Q ss_pred ccCHHHHHHhhcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 517 DFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 517 ~~s~~el~~aT~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.++..+|+.. +.||+|..|+|||+..+ +..+|+|.++.... .-.++..+|+.++ .+++||+||.++
T Consensus 75 ~i~~~dle~~-------~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il-~~~~spyIV~~y 143 (364)
T KOG0581|consen 75 GISLSDLERL-------GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEIL-RSCQSPYIVGFY 143 (364)
T ss_pred ccCHHHhhhh-------hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHH-hhCCCCCeeeEe
Confidence 3566676543 58999999999999997 78999999954332 2357789999999 999999999875
No 257
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=96.92 E-value=0.0011 Score=67.29 Aligned_cols=62 Identities=15% Similarity=0.141 Sum_probs=46.6
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||++... |..||||.+.... ......+..|+.++-..+.|||||+++
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~ 66 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFY 66 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeee
Confidence 5666778999999999999886 7899999986532 223345667776531667999999864
No 258
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=96.92 E-value=0.00071 Score=68.40 Aligned_cols=61 Identities=23% Similarity=0.407 Sum_probs=48.5
Q ss_pred CCCcCCccccccceeEEEEEEcC-------eEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~g-------~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||+|...+ ..||+|.+..... .....|.+|+.++ ..+.||||++++
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l-~~~~~~~i~~~~ 75 (277)
T cd05032 7 KITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVM-KEFNCHHVVRLL 75 (277)
T ss_pred HeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHH-HhCCCCceeEEE
Confidence 45556789999999999998752 6799999865432 2345789999999 999999999874
No 259
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=96.92 E-value=0.0012 Score=67.12 Aligned_cols=60 Identities=28% Similarity=0.390 Sum_probs=44.8
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC--CChhHHHHHHHHHHcCC---CCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEVGAYESFI---FHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~--~~~~~F~~Ev~il~s~l---rHpNLV~li 590 (591)
|.....||+|+||.||++... |..||+|.+..... .....+.+|+.++ .++ .||||++++
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l-~~l~~~~h~ni~~~~ 68 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALL-KRLEAFDHPNIVRLM 68 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHH-HHhhhcCCCCeeeee
Confidence 444568999999999999886 78999999865322 2234567788777 655 799999864
No 260
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=96.91 E-value=0.00085 Score=68.14 Aligned_cols=60 Identities=25% Similarity=0.429 Sum_probs=47.5
Q ss_pred CCcCCccccccceeEEEEEEc--C----eEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--H----MQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g----~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||+|+||.||+|... | ..||+|.+..... .....|.+|+.++ .++.||||++++
T Consensus 9 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 75 (279)
T cd05057 9 LEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVM-ASVDHPHVVRLL 75 (279)
T ss_pred cEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHH-HhCCCCCcceEE
Confidence 444568999999999999874 3 3689998865432 2346789999999 999999999874
No 261
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=96.91 E-value=0.00089 Score=69.18 Aligned_cols=61 Identities=21% Similarity=0.333 Sum_probs=50.0
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC---CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~---~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||++... +..|+||.+..... .....|.+|+.++ ..++||||++++
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l-~~~~~~~i~~~~ 67 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDIL-TFAENPFVVSMF 67 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHH-HhCCCCCeeeeE
Confidence 5666788999999999999886 68999999865321 2345788999999 999999999875
No 262
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=96.90 E-value=0.0011 Score=70.08 Aligned_cols=63 Identities=19% Similarity=0.245 Sum_probs=50.7
Q ss_pred hcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCC--CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 527 T~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.+.|.....||+|+||.||++... |..||||.+... .......+.+|+.++ .++.||||++++
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~~iv~~~ 81 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLM-KLVNHKNIIGLL 81 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHH-HhcCCCCCccee
Confidence 356777788999999999999875 789999998532 222345688999999 999999999764
No 263
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.90 E-value=0.00087 Score=71.65 Aligned_cols=59 Identities=25% Similarity=0.320 Sum_probs=48.7
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCC-hhHHHHHHHHHHcCCCCCCcccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG-PSEFQQEVGAYESFIFHFNLVDS 589 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~-~~~F~~Ev~il~s~lrHpNLV~l 589 (591)
|.....||.|.-+.||.+... +..||||+++-....+ .....+|+..| +-++|||||+.
T Consensus 28 YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~m-sl~~HPNIv~~ 89 (516)
T KOG0582|consen 28 YELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTM-SLIDHPNIVTY 89 (516)
T ss_pred eeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHh-hhcCCCCcceE
Confidence 444568999999999999775 8999999997643333 57789999999 99999999975
No 264
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=96.89 E-value=0.0009 Score=69.22 Aligned_cols=62 Identities=21% Similarity=0.405 Sum_probs=47.4
Q ss_pred cCCCcCCccccccceeEEEEEEc--Ce--EEEEEEccCCC-CCChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HM--QVAIKMLHPHS-LQGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~--~VAVK~L~~~~-~~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
++|.....||.|+||.||+|... |. .+++|.+.... ......|.+|+.++ .++ +||||++++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l-~~l~~h~~iv~~~ 74 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVL-CKLGHHPNIINLL 74 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHH-HHhcCCCCcceEE
Confidence 34566678999999999999875 43 46888875432 23346789999999 999 899999864
No 265
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=96.88 E-value=0.0014 Score=68.68 Aligned_cols=57 Identities=25% Similarity=0.258 Sum_probs=44.6
Q ss_pred CCccccccceeEEEEEEc--CeEEEEEEccCCCCCC--------------hhHHHHHHHHHHcCCCCCCccccc
Q 007740 533 SLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--------------PSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 533 ~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~--------------~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
...||.|+||.||++... |..||||.+....... ...+.+|+.++ .+++||||++++
T Consensus 14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l-~~l~h~~iv~~~ 86 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIM-NEIKHENIMGLV 86 (335)
T ss_pred hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHH-HhCCCcceeeee
Confidence 357999999999999865 7899999985422111 12578999999 999999999764
No 266
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=96.88 E-value=0.0013 Score=68.69 Aligned_cols=60 Identities=22% Similarity=0.346 Sum_probs=49.3
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||+|... |..||||++.... ......|..|+.++ ..++||||++++
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~ 65 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLL-RHLRHENIIGLL 65 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHH-HhcCCcchhhhh
Confidence 445578999999999999986 7899999996543 33456799999999 999999998764
No 267
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=96.88 E-value=0.00077 Score=69.09 Aligned_cols=61 Identities=25% Similarity=0.430 Sum_probs=48.7
Q ss_pred CCCcCCccccccceeEEEEEEc-------CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~-------g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||.|+||.||+|... +..|++|.+..........|.+|+.++ .+++||||++++
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 73 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELL-TNLQHEHIVKFY 73 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHH-hcCCCCCcceEE
Confidence 3555678999999999999753 356899998655444456799999999 999999999864
No 268
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=96.88 E-value=0.00073 Score=71.35 Aligned_cols=60 Identities=22% Similarity=0.348 Sum_probs=46.3
Q ss_pred CCcCCccccccceeEEEEEEc-------CeEEEEEEccCCCC-CChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~-------g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
|.....||.|+||.||+|... +..||+|++..... .....+.+|+.++ .++ +||||++++
T Consensus 9 ~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~-~~l~~h~niv~~~ 77 (337)
T cd05054 9 LKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKIL-IHIGHHLNVVNLL 77 (337)
T ss_pred hhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHH-HhhccCcchhhee
Confidence 445578999999999999753 36799999964322 2235678899999 889 899999874
No 269
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=96.86 E-value=0.0012 Score=65.97 Aligned_cols=60 Identities=28% Similarity=0.278 Sum_probs=48.6
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCC--CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|...+.||.|+||.+|++... |..||||.+... .......|.+|+.++ .++.||||++++
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~ 65 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVL-SNMKHPNIVQYQ 65 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHH-HhCCCCCeeeeE
Confidence 555678999999999998875 789999998542 223346799999999 999999999764
No 270
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=96.86 E-value=0.00085 Score=70.50 Aligned_cols=61 Identities=16% Similarity=0.169 Sum_probs=48.4
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCC---CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~---~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|.....||+|+||.||++... +..||||.+... .......|..|+.++ ..+.||||+.++
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l-~~~~~~~i~~l~ 67 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVL-VNGDCQWITTLH 67 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHH-HhCCCCCEeeEE
Confidence 5666778999999999999886 688999998542 112234588899999 999999999764
No 271
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=96.86 E-value=0.0013 Score=67.33 Aligned_cols=57 Identities=28% Similarity=0.274 Sum_probs=47.6
Q ss_pred CCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 533 SLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 533 ~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
-+.||.|+||.||++... +..|+||.+..........|.+|+.++ .++.||||++++
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l-~~~~h~~vv~~~ 82 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIM-RDYQHPNIVEMY 82 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHH-HHcCCCChheEE
Confidence 458999999999999875 689999998654444456789999999 999999999864
No 272
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=96.85 E-value=0.00082 Score=70.05 Aligned_cols=63 Identities=19% Similarity=0.243 Sum_probs=50.0
Q ss_pred hcCCCcCCccccccceeEEEEEEc--CeEEEEEEccC--CCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHP--HSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 527 T~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~--~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
...|.....||.|.||.|.++... |..||||++.. ......+.-.+|+.+| ..++|+||+.++
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklL-r~~~HeNIi~l~ 87 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLL-RHLRHENIIGLL 87 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHH-HHhcCCCcceEE
Confidence 344555568999999999999886 89999999952 3333456678999999 999999999764
No 273
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=96.84 E-value=0.0014 Score=66.41 Aligned_cols=60 Identities=27% Similarity=0.420 Sum_probs=48.3
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCC---CCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIF---HFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lr---HpNLV~li 590 (591)
|.....||.|+||.||+|... |..||||.+.... ......|.+|+.++ .+++ |||+++++
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l-~~l~~~~~~~vi~~~ 68 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALL-SQLRQSQPPNITKYY 68 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHH-HHhccCCCCCeeeEe
Confidence 455568999999999999985 7899999986532 33456789999999 8887 99999764
No 274
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=96.84 E-value=0.0014 Score=68.63 Aligned_cols=56 Identities=16% Similarity=0.137 Sum_probs=44.4
Q ss_pred Cccccc--cceeEEEEEEc--CeEEEEEEccCCCCC--ChhHHHHHHHHHHcCCCCCCccccc
Q 007740 534 LKIGEG--GYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 534 ~~iG~G--~~G~Vykg~l~--g~~VAVK~L~~~~~~--~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.+||+| +|+.||++... |..||||.+...... ....+..|+.++ ..++|||||+++
T Consensus 4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l-~~l~hpniv~~~ 65 (327)
T cd08227 4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVS-KLFNHPNIVPYR 65 (327)
T ss_pred hhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHH-HhcCCCCeeeEE
Confidence 478999 78899999886 789999999654221 234577899999 999999999864
No 275
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=96.83 E-value=0.0014 Score=68.19 Aligned_cols=60 Identities=23% Similarity=0.258 Sum_probs=47.3
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCC---ChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~---~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||+|... |..|+||.+...... ....+.+|+.++ .+++|||+++++
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l-~~l~h~~iv~~~ 87 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFL-QQLKHPNTIEYK 87 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHH-HhCCCCCCccEE
Confidence 344467999999999999875 789999998643222 234688999999 999999999764
No 276
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=96.82 E-value=0.00072 Score=75.55 Aligned_cols=67 Identities=16% Similarity=0.146 Sum_probs=53.2
Q ss_pred HHHHhhcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCcccc
Q 007740 522 EIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDS 589 (591)
Q Consensus 522 el~~aT~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~l 589 (591)
++....++|.....||.|+||.||++... |..||||++.... ......+.+|+.++ ..++|+|+|++
T Consensus 26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l-~~~~h~~iv~~ 96 (496)
T PTZ00283 26 TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCL-LNCDFFSIVKC 96 (496)
T ss_pred cccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHH-hcCCCCcEEEe
Confidence 33444567877889999999999999874 8999999986532 22345688999999 99999999874
No 277
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=96.82 E-value=0.0012 Score=68.02 Aligned_cols=61 Identities=25% Similarity=0.479 Sum_probs=47.2
Q ss_pred CCCcCCccccccceeEEEEEEc--C--eEEEEEEccCCC-CCChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--H--MQVAIKMLHPHS-LQGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g--~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
+|.....||.|+||.||+|... | ..+++|.+.... ......|.+|+.++ .++ +||||++++
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l-~~l~~hp~iv~~~ 69 (297)
T cd05089 3 DIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVL-CKLGHHPNIINLL 69 (297)
T ss_pred cceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHH-HhhcCCCchhheE
Confidence 4566678999999999999885 3 357888886422 22346799999999 999 799999874
No 278
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=96.81 E-value=0.00092 Score=76.48 Aligned_cols=59 Identities=17% Similarity=0.274 Sum_probs=50.5
Q ss_pred CcCCccccccceeEEEEEEc-C-eEEEEEEccCCCCCChhHHHHHHHHHHcCCC-CCCccccc
Q 007740 531 DPSLKIGEGGYGSIYKGLLR-H-MQVAIKMLHPHSLQGPSEFQQEVGAYESFIF-HFNLVDSF 590 (591)
Q Consensus 531 ~~~~~iG~G~~G~Vykg~l~-g-~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lr-HpNLV~li 590 (591)
.-.+.|-+|||+.||.+... + ..+|+|++-...........+||.+| .+|. |||||.++
T Consensus 40 ~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~M-K~L~gh~nIV~yi 101 (738)
T KOG1989|consen 40 TVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIM-KLLSGHKNIVSYI 101 (738)
T ss_pred EEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHH-HHhcCCCceeeEe
Confidence 33568999999999999987 4 89999998666666778899999999 8886 99999876
No 279
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=96.81 E-value=0.0017 Score=64.33 Aligned_cols=60 Identities=17% Similarity=0.318 Sum_probs=49.5
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC--CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~--~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||++... +..|++|.+..... .....+.+|++++ .+++|||+++++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l-~~l~~~~~~~~~ 65 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKIL-KKLNHPNIIKYY 65 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHH-HhcCCCChhheE
Confidence 555678999999999999987 78999999965432 3456789999999 999999998763
No 280
>TIGR02432 lysidine_TilS_N tRNA(Ile)-lysidine synthetase, N-terminal domain. The only examples in which the wobble position of a tRNA must discriminate between G and A of mRNA are AUA (Ile) vs. AUG (Met) and UGA (stop) vs. UGG (Trp). In all bacteria, the wobble position of the tRNA(Ile) recognizing AUA is lysidine, a lysine derivative of cytidine. This family describes a protein domain found, apparently, in all bacteria in a single copy. Eukaryotic sequences appear to be organellar. The domain archictecture of this protein family is variable; some, including characterized proteins of E. coli and B. subtilis known to be tRNA(Ile)-lysidine synthetase, include a conserved 50-residue domain that many other members lack. This protein belongs to the ATP-binding PP-loop family ( pfam01171). It appears in the literature and protein databases as TilS, YacA, and putative cell cycle protein MesJ (a misnomer).
Probab=96.79 E-value=0.019 Score=55.36 Aligned_cols=98 Identities=18% Similarity=0.257 Sum_probs=69.6
Q ss_pred EEEEeecCChHHHHHHHHHHHHhc--CCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 46 KIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLL 123 (591)
Q Consensus 46 kIlVAVD~S~~~S~~Al~wAl~~~--~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~~ 123 (591)
+|+||+.|. ..|..++.++...+ .|.+|++|||-.... + ...+-.+....
T Consensus 1 ~v~va~SGG-~DS~~ll~ll~~~~~~~~~~v~~v~vd~g~~---------~------------------~~~~~~~~~~~ 52 (189)
T TIGR02432 1 RILVAVSGG-VDSMALLHLLLKLQPKLKIRLIAAHVDHGLR---------P------------------ESDEEAEFVQQ 52 (189)
T ss_pred CEEEEeCCC-HHHHHHHHHHHHHHHHcCCCEEEEEeCCCCC---------h------------------hHHHHHHHHHH
Confidence 589999999 99999998887765 356799999864321 0 01123445566
Q ss_pred HHHHcCCceEEEEEecCC--------hH--------HHHHHHHHHcCCCEEEEccCCCchhhHH
Q 007740 124 ICRQMGVRAEKLDTESES--------TE--------KGILELISHYGIRKLVMGAAADKHYKKK 171 (591)
Q Consensus 124 ~c~~~gV~~e~~vie~~~--------~~--------~~Ive~a~~~~idlIVmGs~g~~~~~R~ 171 (591)
+|...||++..+.+.... .. ..+.++|.++|++.|+.|.+......+.
T Consensus 53 ~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~r~~R~~~l~~~a~~~g~~~i~~Gh~~~D~~e~~ 116 (189)
T TIGR02432 53 FCKKLNIPLEIKKVDVKALAKGKKKNLEEAAREARYDFFEEIAKKHGADYILTAHHADDQAETI 116 (189)
T ss_pred HHHHcCCCEEEEEecchhhccccCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccHHHHHHH
Confidence 788889998766553221 22 5788899999999999999986654443
No 281
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=96.79 E-value=0.0013 Score=66.20 Aligned_cols=61 Identities=18% Similarity=0.273 Sum_probs=49.1
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC---CCChhHHHHHHHHHHcCCC-CCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEVGAYESFIF-HFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~---~~~~~~F~~Ev~il~s~lr-HpNLV~li 590 (591)
+|.....||.|+||.||++... |..||+|++.... ......+..|+.++ .+++ ||||++++
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~-~~l~~~~~i~~~~ 68 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVL-TRLNGHPGIIKLY 68 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHH-HhcccCCCchhHH
Confidence 4566678999999999999985 7899999986522 12245688999999 9999 99999764
No 282
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=96.79 E-value=0.0016 Score=65.00 Aligned_cols=60 Identities=18% Similarity=0.166 Sum_probs=48.0
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCC-CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH-SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~-~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||++... +..+|+|.+... .......+.+|+.++ ..+.||||++++
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 64 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLL-AKMKHPNIVAFK 64 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHH-HhCCCCCcceEE
Confidence 444568999999999999875 789999988532 233456788999999 999999998764
No 283
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=96.78 E-value=0.0016 Score=64.90 Aligned_cols=60 Identities=18% Similarity=0.226 Sum_probs=48.0
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCC--CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|...+.||.|+||.||.+... |..|++|.+... .......|.+|+.++ .+++||||++++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l-~~~~h~~i~~~~ 65 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVIL-SLLQHPNIIAYY 65 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHH-HhCCCCCeeEEE
Confidence 555678999999988877654 789999998543 233456799999999 999999999874
No 284
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=96.78 E-value=0.0014 Score=76.08 Aligned_cols=62 Identities=19% Similarity=0.262 Sum_probs=50.4
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCC---ChhHHHHHHHHHHcCCCCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~---~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++|....+||.|+||.||+|... +..||||++...... ....|..|+.++ ..++|||||+++
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l-~~l~hp~Iv~~~ 70 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDAL-ALSKSPFIVHLY 70 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHH-HhcCCCCcCeEE
Confidence 35666678999999999999987 789999999653222 236788999999 999999999875
No 285
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=96.78 E-value=0.0011 Score=69.58 Aligned_cols=61 Identities=18% Similarity=0.196 Sum_probs=48.2
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCC---CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~---~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|....+||+|+||.||++... +..||+|++... .......|..|+.++ ..++||||++++
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l-~~~~~~~i~~~~ 67 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVL-VNGDNQWITTLH 67 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHH-hhCCCCCEeeEE
Confidence 5666778999999999999987 578999998532 112234588999999 999999998764
No 286
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=96.75 E-value=0.0015 Score=77.72 Aligned_cols=63 Identities=19% Similarity=0.261 Sum_probs=50.8
Q ss_pred hcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 527 T~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.++|.....||.|+||.||++... +..||+|.+.... ......|..|+.++ .+++|||||+++
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL-~~L~HPNIVrl~ 78 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVM-RELKHKNIVRYI 78 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHH-HHcCCCCcCeEE
Confidence 345666778999999999999886 6789999986432 22346799999999 999999999875
No 287
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=96.74 E-value=0.0009 Score=68.40 Aligned_cols=62 Identities=24% Similarity=0.385 Sum_probs=48.3
Q ss_pred cCCCcCCccccccceeEEEEEEcC-------eEEEEEEccCCC-CCChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHS-LQGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~g-------~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
++|.....||+|+||.||++...+ ..||+|.+.... ......|.+|+.++ .++ +||||++++
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l-~~l~~h~~i~~~~ 82 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMM-KMIGKHKNIINLL 82 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHH-HhhcCCCCeeeEE
Confidence 446666789999999999998742 579999986532 22345689999999 888 899999764
No 288
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=96.74 E-value=0.0019 Score=65.45 Aligned_cols=59 Identities=24% Similarity=0.246 Sum_probs=45.8
Q ss_pred CcCCccccccceeEEEEEEc--CeEEEEEEccCCCC-CChhHHHHHHHHHHcCCC-CCCccccc
Q 007740 531 DPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFIF-HFNLVDSF 590 (591)
Q Consensus 531 ~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lr-HpNLV~li 590 (591)
.....||.|+||.||+|... +..|+||.+..... .....+.+|+..+ .+++ ||||++++
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l-~~~~~h~~i~~~~ 64 (283)
T cd07830 2 KVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSL-RKLNEHPNIVKLK 64 (283)
T ss_pred eeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHH-HhccCCCCchhHH
Confidence 34568999999999999986 67899999854322 2233456799999 9999 99999764
No 289
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=96.72 E-value=0.0014 Score=68.57 Aligned_cols=58 Identities=21% Similarity=0.145 Sum_probs=42.9
Q ss_pred cCCccccccceeEEEEEEc--CeEEEEEEccCCC---CCChhHHHHHHHH---HHcCCCCCCccccc
Q 007740 532 PSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEVGA---YESFIFHFNLVDSF 590 (591)
Q Consensus 532 ~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~---~~~~~~F~~Ev~i---l~s~lrHpNLV~li 590 (591)
....||+|+||.||++... |..||||.+.... ......+.+|+.+ + .+++||||++++
T Consensus 3 i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~-~~l~hp~i~~~~ 68 (324)
T cd05589 3 CLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETA-NSERHPFLVNLF 68 (324)
T ss_pred EEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhc-cccCCCChhcee
Confidence 3468999999999999886 7899999996421 2223456666544 4 578899999864
No 290
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=96.70 E-value=0.0013 Score=69.43 Aligned_cols=63 Identities=21% Similarity=0.285 Sum_probs=50.4
Q ss_pred hcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCC--CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 527 T~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.++|.....||.|+||.||+|... +..||||.+... .......+.+|+.++ .++.||||++++
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~~iv~~~ 80 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLL-KHMDHENVIGLL 80 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHH-HhccCCCHHHHH
Confidence 456767789999999999999986 689999998542 222345678899999 999999998753
No 291
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=96.69 E-value=0.0025 Score=61.67 Aligned_cols=59 Identities=27% Similarity=0.447 Sum_probs=49.6
Q ss_pred CcCCccccccceeEEEEEEc--CeEEEEEEccCCCCC-ChhHHHHHHHHHHcCCCCCCccccc
Q 007740 531 DPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 531 ~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~-~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.....||.|+||.||++... +..+++|.+...... ....|.+|+..+ .+++|+|+++++
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~-~~~~~~~i~~~~ 63 (225)
T smart00221 2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRIL-KKLKHPNIVKLY 63 (225)
T ss_pred ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHH-HhCCCCChhhhe
Confidence 44568999999999999997 589999999765444 567899999999 999999998764
No 292
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=96.69 E-value=0.0013 Score=67.98 Aligned_cols=61 Identities=23% Similarity=0.345 Sum_probs=47.7
Q ss_pred CCCcCCccccccceeEEEEEEc---------CeEEEEEEccCCC-CCChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR---------HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~---------g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
+|.....||+|+||.||++... +..||+|.+.... ......|..|+.++ .++ +||||++++
T Consensus 19 ~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l-~~l~~h~~i~~~~ 90 (307)
T cd05098 19 RLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM-KMIGKHKNIINLL 90 (307)
T ss_pred HeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHH-HHhcCCCCEeeEE
Confidence 4666678999999999998753 2469999997542 23345688999999 888 899999874
No 293
>PHA03207 serine/threonine kinase US3; Provisional
Probab=96.68 E-value=0.0018 Score=69.95 Aligned_cols=56 Identities=13% Similarity=0.204 Sum_probs=45.6
Q ss_pred CCCcCCccccccceeEEEEEEc----CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~----g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.|.....||.|+||.||++... +..|+||.+... ..+.+|+.++ .+++|||||+++
T Consensus 93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il-~~l~h~~iv~~~ 152 (392)
T PHA03207 93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDIL-KTISHRAIINLI 152 (392)
T ss_pred ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHH-HhcCCCCcccee
Confidence 4666678999999999999764 467999988542 3467899999 999999999875
No 294
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=96.66 E-value=0.066 Score=57.55 Aligned_cols=57 Identities=19% Similarity=0.246 Sum_probs=42.6
Q ss_pred CCccccccceeEEEEEEc--CeEEEEEEccCCC---CCC----hhHHHHHHHHHHcCCCCCCccccc
Q 007740 533 SLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQG----PSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 533 ~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~---~~~----~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.++||+|||..|||++-- ...||||+-+... ... .+--++|-.|- ..+.||.||+++
T Consensus 468 LhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIH-KeLDHpRIVKlY 533 (775)
T KOG1151|consen 468 LHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIH-KELDHPRIVKLY 533 (775)
T ss_pred HHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhh-hccCcceeeeee
Confidence 457999999999999754 6889999874321 111 12346788888 899999999885
No 295
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=96.63 E-value=0.0025 Score=64.32 Aligned_cols=58 Identities=29% Similarity=0.354 Sum_probs=47.5
Q ss_pred cCCccccccceeEEEEEEc--CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 532 PSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 532 ~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
...+||.|+||.||+|... +..||+|.+.... ......|..|+.++ .++.||||++++
T Consensus 3 ~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l-~~~~~~~i~~~~ 64 (282)
T cd07829 3 KLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLL-KELKHPNIVKLL 64 (282)
T ss_pred eehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHH-HhcCCCCHHHHH
Confidence 3467999999999999986 7899999996542 22346788999999 999999999764
No 296
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=96.63 E-value=0.0012 Score=72.25 Aligned_cols=61 Identities=21% Similarity=0.336 Sum_probs=49.2
Q ss_pred ccccCHHHHHHhhcCCCcCCccccccceeEEEEEEcCeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 515 FSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 515 ~~~~s~~el~~aT~~F~~~~~iG~G~~G~Vykg~l~g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.+++.|++|.+. .-||.|.-|.||.|.|.+..||||+.+.. -..+|..| .+|+||||+.|.
T Consensus 118 ~WeiPFe~IsEL-------eWlGSGaQGAVF~Grl~netVAVKKV~el-------kETdIKHL-RkLkH~NII~Fk 178 (904)
T KOG4721|consen 118 LWEIPFEEISEL-------EWLGSGAQGAVFLGRLHNETVAVKKVREL-------KETDIKHL-RKLKHPNIITFK 178 (904)
T ss_pred hccCCHHHhhhh-------hhhccCcccceeeeeccCceehhHHHhhh-------hhhhHHHH-HhccCcceeeEe
Confidence 346777777443 35899999999999999999999998542 23578899 999999999874
No 297
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=96.63 E-value=0.0016 Score=67.26 Aligned_cols=61 Identities=23% Similarity=0.371 Sum_probs=47.3
Q ss_pred CCCcCCccccccceeEEEEEEc---------CeEEEEEEccCCC-CCChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR---------HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~---------g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
+|.....||+|+||.||++... +..||+|.+.... ......|.+|+.++ ..+ +||||++++
T Consensus 16 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l-~~l~~h~~i~~~~ 87 (304)
T cd05101 16 KLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM-KMIGKHKNIINLL 87 (304)
T ss_pred HeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHH-HhhccCCCchhee
Confidence 3555678999999999999742 3479999986432 23356789999999 888 899999864
No 298
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=96.60 E-value=0.0027 Score=63.95 Aligned_cols=61 Identities=21% Similarity=0.368 Sum_probs=45.5
Q ss_pred CCcCCccccccceeEEEEEEc---CeEEEEEEccCCC----------CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHS----------LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~---g~~VAVK~L~~~~----------~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||+|... +..||+|.+.... ......+.+|+.++...++||||++++
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~ 75 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYY 75 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEE
Confidence 555678999999999999986 4789999884321 112355788998882358999999865
No 299
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=96.60 E-value=0.0025 Score=63.50 Aligned_cols=60 Identities=25% Similarity=0.215 Sum_probs=48.0
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||++... +..||+|.+.... ......|.+|+.++ .+++|||+++++
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~ 65 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLL-SQLKHPNIVAYR 65 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHH-HhCCCCCeeeee
Confidence 444568999999999999875 6889999985432 23346789999999 999999999764
No 300
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=96.58 E-value=0.0012 Score=65.81 Aligned_cols=57 Identities=26% Similarity=0.483 Sum_probs=44.5
Q ss_pred CCccccccceeEEEEEEc--CeEEEEEEccCCCCCCh--hHHHHHHHHHHcCCCCCCccccc
Q 007740 533 SLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGP--SEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 533 ~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~--~~F~~Ev~il~s~lrHpNLV~li 590 (591)
...||+|+||.||++... +..||+|.+........ ....+|+.++ .+++||||++++
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~-~~l~~~~i~~~~ 64 (260)
T PF00069_consen 4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKIL-RRLRHPNIVQIL 64 (260)
T ss_dssp EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHH-HHHTBTTBCHEE
T ss_pred eEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcc-cccccccccccc
Confidence 357999999999999987 57899999976543221 2235699999 999999999764
No 301
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=96.56 E-value=0.0028 Score=66.46 Aligned_cols=60 Identities=18% Similarity=0.215 Sum_probs=46.8
Q ss_pred CCcCCccccccceeEEEEEEc----CeEEEEEEccCC--CCCChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR----HMQVAIKMLHPH--SLQGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~----g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
|.....||.|+||.||++... +..||||.+... .......+.+|+.++ .++ .|||||+++
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l-~~l~~h~~iv~~~ 68 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLL-RHFRGHKNITCLY 68 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHH-HHhcCCCChheee
Confidence 445568999999999999985 458999998542 222345788999999 888 499999874
No 302
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=96.53 E-value=0.0017 Score=72.10 Aligned_cols=60 Identities=13% Similarity=0.177 Sum_probs=47.2
Q ss_pred CCcCCccccccceeEEEEEEc---CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~---g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||+|+||.||++.-. +..|++|.+..........|.+|+.++ .+++|||||+++
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l-~~l~Hpniv~~~ 131 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCL-AACDHFGIVKHF 131 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHH-HhCCCCCEeEEE
Confidence 455678999999999999754 567899877544333345678899999 999999999874
No 303
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=96.53 E-value=0.0028 Score=62.90 Aligned_cols=60 Identities=25% Similarity=0.308 Sum_probs=48.0
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCC--CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~--~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|....+||.|+||.||++... |..+++|.+.... ......|.+|+.++ .+++||||++++
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~ 65 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRIL-ASVNHPNIISYK 65 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHH-HhCCCCCchhhh
Confidence 555678999999999999775 6889999985432 23345788999999 999999999763
No 304
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=96.51 E-value=0.0023 Score=66.32 Aligned_cols=60 Identities=23% Similarity=0.234 Sum_probs=47.2
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCC---CCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~---~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|...+.||.|+||.||+|... |..||||.+.... ......|.+|+.++ ..++|||+++++
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 81 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFL-QKLRHPNTIQYR 81 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHH-HhCCCCCcccEE
Confidence 444467999999999999985 6889999985422 12245688999999 999999999864
No 305
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=96.49 E-value=0.0037 Score=63.18 Aligned_cols=57 Identities=30% Similarity=0.327 Sum_probs=46.7
Q ss_pred CCccccccceeEEEEEEc--CeEEEEEEccCCCC--CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 533 SLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 533 ~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~--~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
...||.|+||.||++... |..+++|.+..... .....+.+|+.++ .+++||||++++
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l-~~l~~~~i~~~~ 64 (283)
T cd05118 4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLL-KELNHPNIIKLL 64 (283)
T ss_pred ceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHH-HHhcCCCcchHH
Confidence 457999999999999885 78999999865322 2356788999999 999999999764
No 306
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=96.49 E-value=0.004 Score=62.97 Aligned_cols=57 Identities=26% Similarity=0.264 Sum_probs=43.6
Q ss_pred CCccccccceeEEEEEEc--CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCC-CCCccccc
Q 007740 533 SLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIF-HFNLVDSF 590 (591)
Q Consensus 533 ~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lr-HpNLV~li 590 (591)
...||.|+||.||+|... +..||+|.+.... ......+.+|+.++ .++. |||+++++
T Consensus 4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l-~~l~~h~~i~~~~ 64 (282)
T cd07831 4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQAL-RRLSPHPNILRLI 64 (282)
T ss_pred EeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHH-hhcCCCCCccceE
Confidence 457999999999999875 7899999986532 22223456788888 8885 99999864
No 307
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=96.49 E-value=0.22 Score=56.52 Aligned_cols=41 Identities=17% Similarity=0.264 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 449 LESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERD 489 (591)
Q Consensus 449 l~~~~~e~~~~~~ele~~~~~~~~~l~~~~~~~~el~~~r~ 489 (591)
|..++..++.++++|.+++......+...+.+++++..+++
T Consensus 442 l~~eletLn~k~qqls~kl~Dvr~~~tt~kt~ie~~~~q~e 482 (1118)
T KOG1029|consen 442 LQQELETLNFKLQQLSGKLQDVRVDITTQKTEIEEVTKQRE 482 (1118)
T ss_pred HHHHHHHHHHHHHHHhhhhhhheeccchHHHHHHHhhhHHH
Confidence 33344444444444444444333333333444444443333
No 308
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=96.46 E-value=0.0034 Score=64.49 Aligned_cols=61 Identities=15% Similarity=0.234 Sum_probs=47.1
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC-CCChhHHHHHHHHHHcCCC-CCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFIF-HFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~lr-HpNLV~li 590 (591)
+|.....||.|+||.||+|... |..||||.+.... ......+..|+.++ .+.+ ||||++++
T Consensus 16 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~-~~~~~~~~i~~~~ 80 (296)
T cd06618 16 DLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVV-LKSHDCPYIVKCY 80 (296)
T ss_pred hheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHH-HhccCCCchHhhh
Confidence 3455678999999999999997 8899999996432 22345677788777 6665 99999864
No 309
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes. ; GO: 0016021 integral to membrane
Probab=96.45 E-value=0.38 Score=55.87 Aligned_cols=57 Identities=18% Similarity=0.145 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007740 365 AMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANG 421 (591)
Q Consensus 365 ~~~e~~~~r~e~~~~~~~~~~ae~e~~~a~~~a~~~e~~~~ee~~~rk~~E~~l~~e 421 (591)
+..|+..+|+|-.+-..+...+....-.-++-...+|..+.+|.++|..+|..|.+|
T Consensus 458 lk~eL~qlr~ene~Lq~Kl~~L~~aRq~DKq~l~~LEkrL~eE~~~R~~lEkQL~eE 514 (697)
T PF09726_consen 458 LKSELSQLRQENEQLQNKLQNLVQARQQDKQSLQQLEKRLAEERRQRASLEKQLQEE 514 (697)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455555444433233322222222222223344444444444444444444444
No 310
>PRK10345 hypothetical protein; Provisional
Probab=96.43 E-value=0.0033 Score=62.26 Aligned_cols=59 Identities=15% Similarity=0.220 Sum_probs=44.3
Q ss_pred CCcCCccccccceeEEEEEEcCeEEEEEEccCCCCCChhHHHHHHHHHHcCC-----CCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEVGAYESFI-----FHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~l-----rHpNLV~li 590 (591)
++....||+|+||.||...-.+.. +||++..........+.+|+.++ ..+ .||||++++
T Consensus 4 L~~~~~LG~G~~~~Vy~hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l-~~L~~~~~~h~nIvr~y 67 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYAHPEDAQR-CIKIVYHRGDGGDKEIRRELKYY-AHLSRRLIDWSGIPRYY 67 (210)
T ss_pred cCCcceecCCCceEEEECCCCcCe-EEEEEeccccchHHHHHHHHHHH-HHhhccCCCCcccceee
Confidence 345678999999999962212334 69988665444567899999999 988 579999875
No 311
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=96.39 E-value=0.0028 Score=65.86 Aligned_cols=61 Identities=21% Similarity=0.369 Sum_probs=46.8
Q ss_pred CCCcCCccccccceeEEEEEEc---------CeEEEEEEccCCC-CCChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR---------HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~---------g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
+|...+.||+|+||.||++... ...||+|.+.... ......|.+|+.++ .++ .|||||+++
T Consensus 13 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l-~~l~~h~~iv~~~ 84 (314)
T cd05099 13 RLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELM-KLIGKHKNIINLL 84 (314)
T ss_pred HeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHH-HhccCCCCeeeEE
Confidence 3555678999999999998742 3579999986432 22345688999999 888 699999875
No 312
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=96.39 E-value=0.0033 Score=65.85 Aligned_cols=60 Identities=18% Similarity=0.207 Sum_probs=45.9
Q ss_pred CCcCCccccccceeEEEEEE-----cCeEEEEEEccCC----CCCChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLL-----RHMQVAIKMLHPH----SLQGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l-----~g~~VAVK~L~~~----~~~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
|.....||+|+||.||++.. .|..||+|++... .......+..|+.++ ..+ +||||+.++
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l-~~l~~~~~i~~~~ 71 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVL-EHVRQSPFLVTLH 71 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHH-HhccCCCCcccEE
Confidence 55567899999999998875 2688999998542 122245688999999 888 599999764
No 313
>PTZ00284 protein kinase; Provisional
Probab=96.37 E-value=0.002 Score=71.23 Aligned_cols=66 Identities=17% Similarity=0.220 Sum_probs=49.0
Q ss_pred cCHHHHHHhhcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCC
Q 007740 518 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFN 585 (591)
Q Consensus 518 ~s~~el~~aT~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpN 585 (591)
+..+++...+++|....+||+|+||.||++... +..||||++.... .....+..|+.++ ..++|.|
T Consensus 119 ~~~~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l-~~l~~~~ 186 (467)
T PTZ00284 119 VLGEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFM-EKVRQAD 186 (467)
T ss_pred ecCCccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHH-HHHhhcC
Confidence 334455566788888899999999999999875 6889999995432 2234567777777 7777665
No 314
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes. ; GO: 0016021 integral to membrane
Probab=96.37 E-value=0.33 Score=56.36 Aligned_cols=16 Identities=19% Similarity=0.235 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHH
Q 007740 362 LAQAMAEAENSRREAF 377 (591)
Q Consensus 362 l~~~~~e~~~~r~e~~ 377 (591)
....+.|+++||-|+.
T Consensus 420 ~~rLE~dvkkLraeLq 435 (697)
T PF09726_consen 420 ISRLEADVKKLRAELQ 435 (697)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3456666666665544
No 315
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=96.36 E-value=0.0039 Score=63.65 Aligned_cols=60 Identities=20% Similarity=0.219 Sum_probs=46.6
Q ss_pred CCcCCccccccceeEEEEEE-----cCeEEEEEEccCCC----CCChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLL-----RHMQVAIKMLHPHS----LQGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l-----~g~~VAVK~L~~~~----~~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
|.....||.|+||.||.+.. .|..||+|.+.... ......|.+|+.++ .++ +||||+.++
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l-~~l~~~~~i~~~~ 71 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVL-EHIRQSPFLVTLH 71 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHH-HhcccCCChhcee
Confidence 44556899999999999876 37899999985422 12246688999999 989 599999764
No 316
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=96.34 E-value=0.0035 Score=65.50 Aligned_cols=60 Identities=17% Similarity=0.169 Sum_probs=45.6
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCC---CCCChhHHHHHHHHHHcCCCCCC-cccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEVGAYESFIFHFN-LVDS 589 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~---~~~~~~~F~~Ev~il~s~lrHpN-LV~l 589 (591)
+|.....||.|+||.||+|... +..||||++... .......+..|+.++ ..+.|++ |+.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l-~~~~~~~~i~~~ 66 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVL-ALPGKPPFLTQL 66 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHH-HhcCCCCceeee
Confidence 3555678999999999999886 578999999643 223356688999999 8887765 5543
No 317
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=96.30 E-value=0.004 Score=65.05 Aligned_cols=60 Identities=17% Similarity=0.156 Sum_probs=44.5
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC---CCChhHHHHHHHHHHcCC-CCCCcccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEVGAYESFI-FHFNLVDS 589 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~---~~~~~~F~~Ev~il~s~l-rHpNLV~l 589 (591)
+|.....||+|+||.||+|... +..||||.+.... ......+..|..++ ..+ +||||+.+
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l-~~~~~~~~i~~~ 66 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVL-ALSGKPPFLTQL 66 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHH-HhccCCCeEeeE
Confidence 3566678999999999999886 5799999986532 22234567788888 666 57777755
No 318
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=96.30 E-value=0.0059 Score=63.88 Aligned_cols=55 Identities=24% Similarity=0.338 Sum_probs=43.2
Q ss_pred ccccc--cceeEEEEEEc--CeEEEEEEccCCCC--CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 535 KIGEG--GYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 535 ~iG~G--~~G~Vykg~l~--g~~VAVK~L~~~~~--~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.||.| +||.||.+... |+.||||++..... ...+.|.+|+.++ ..++|||||+++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~-~~l~h~niv~~~ 65 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLS-HFFRHPNIMTSW 65 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHH-HhCCCCCcceEe
Confidence 45666 89999999874 89999999865322 2246788999999 999999999864
No 319
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=96.27 E-value=0.0034 Score=65.84 Aligned_cols=60 Identities=23% Similarity=0.363 Sum_probs=46.2
Q ss_pred CCcCCccccccceeEEEEEEc---------CeEEEEEEccCCC-CCChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR---------HMQVAIKMLHPHS-LQGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~---------g~~VAVK~L~~~~-~~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
|.....||+|+||.||++... +..||+|.+.... ......|.+|+.++ .++ +||||++++
T Consensus 14 ~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l-~~l~~h~~iv~~~ 84 (334)
T cd05100 14 LTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMM-KMIGKHKNIINLL 84 (334)
T ss_pred eeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHH-HhhcCCCCeeeee
Confidence 444568999999999999742 2378999886532 22356799999999 999 899999764
No 320
>PHA03210 serine/threonine kinase US3; Provisional
Probab=96.25 E-value=0.0017 Score=72.61 Aligned_cols=63 Identities=17% Similarity=0.208 Sum_probs=42.5
Q ss_pred hcCCCcCCccccccceeEEEEEEcC---eEEEEEEcc--------------C---CCCCChhHHHHHHHHHHcCCCCCCc
Q 007740 527 THNFDPSLKIGEGGYGSIYKGLLRH---MQVAIKMLH--------------P---HSLQGPSEFQQEVGAYESFIFHFNL 586 (591)
Q Consensus 527 T~~F~~~~~iG~G~~G~Vykg~l~g---~~VAVK~L~--------------~---~~~~~~~~F~~Ev~il~s~lrHpNL 586 (591)
..+|.....||+|+||.||++.++. ..+++|.+. . ........|.+|+.+| .+++||||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il-~~l~HpnI 225 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILAL-GRLNHENI 225 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHH-HhCCCCCc
Confidence 3467777899999999999987641 122222110 0 1111235688999999 99999999
Q ss_pred cccc
Q 007740 587 VDSF 590 (591)
Q Consensus 587 V~li 590 (591)
|+++
T Consensus 226 v~l~ 229 (501)
T PHA03210 226 LKIE 229 (501)
T ss_pred CcEe
Confidence 9874
No 321
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=96.24 E-value=0.0052 Score=62.22 Aligned_cols=59 Identities=27% Similarity=0.316 Sum_probs=43.8
Q ss_pred CcCCccccccceeEEEEEEc--CeEEEEEEccCCCC--CChhHHHHHHHHHHcCC---CCCCccccc
Q 007740 531 DPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEVGAYESFI---FHFNLVDSF 590 (591)
Q Consensus 531 ~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~--~~~~~F~~Ev~il~s~l---rHpNLV~li 590 (591)
...+.||.|+||.||+|... |..||||.+..... .....+.+|+.++ .++ .||||++++
T Consensus 2 ~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l-~~l~~~~h~~i~~~~ 67 (287)
T cd07838 2 EELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALL-KQLESFEHPNIVRLL 67 (287)
T ss_pred eEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHH-HHhhccCCCCcceEE
Confidence 34568999999999999986 78999999964322 1134567787766 555 699999864
No 322
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.24 E-value=0.002 Score=69.89 Aligned_cols=60 Identities=22% Similarity=0.380 Sum_probs=47.2
Q ss_pred CCcCCccccccceeEEEEE--EcCeEEEEEEccCCCC--CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHSL--QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~--l~g~~VAVK~L~~~~~--~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|+....||.|-|+.|-.+. |.|..||||+++.... .....+.+||+.| .-+.|||||+|+
T Consensus 20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCM-KLVQHpNiVRLY 83 (864)
T KOG4717|consen 20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCM-KLVQHPNIVRLY 83 (864)
T ss_pred ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHH-HHhcCcCeeeee
Confidence 4555679999999887664 5699999999976332 2345677899999 989999999986
No 323
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=96.21 E-value=0.0043 Score=64.94 Aligned_cols=60 Identities=17% Similarity=0.158 Sum_probs=44.8
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCC---CCChhHHHHHHHHHHcCCCC-CCcccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEVGAYESFIFH-FNLVDS 589 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~---~~~~~~F~~Ev~il~s~lrH-pNLV~l 589 (591)
+|.....||+|+||.||++... |..||||++.... ......+..|..++ ..+.| |+|+.+
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l-~~~~~~~~i~~~ 66 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVL-ALQDKPPFLTQL 66 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHH-HhccCCCchhhe
Confidence 3566678999999999999875 7899999986431 22345678899888 77755 566554
No 324
>PRK11637 AmiB activator; Provisional
Probab=96.17 E-value=1.5 Score=48.16 Aligned_cols=21 Identities=14% Similarity=0.137 Sum_probs=10.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 007740 357 NLYDQLAQAMAEAENSRREAF 377 (591)
Q Consensus 357 ~~~~~l~~~~~e~~~~r~e~~ 377 (591)
.+.+++++...+++.+.+++.
T Consensus 44 ~~~~~l~~l~~qi~~~~~~i~ 64 (428)
T PRK11637 44 DNRDQLKSIQQDIAAKEKSVR 64 (428)
T ss_pred hhHHHHHHHHHHHHHHHHHHH
Confidence 344455555555554444444
No 325
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.14 E-value=0.00079 Score=74.43 Aligned_cols=55 Identities=20% Similarity=0.405 Sum_probs=47.5
Q ss_pred ccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 535 ~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.||.|.||.|||+.-. +...|.|++...+....++|.-|++|| +.+.|||||+|+
T Consensus 39 ELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeIL-a~CdHP~ivkLl 95 (1187)
T KOG0579|consen 39 ELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEIL-AECDHPVIVKLL 95 (1187)
T ss_pred hhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhh-hcCCChHHHHHH
Confidence 5799999999999887 445578988777767788999999999 999999999886
No 326
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.08 E-value=0.0048 Score=67.79 Aligned_cols=56 Identities=25% Similarity=0.309 Sum_probs=48.2
Q ss_pred CccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 534 ~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.+||+|.-|.||.+.-. +..||||+++.......+-..+|+.+| ...+|+|||.++
T Consensus 279 ~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm-~~~~H~NiVnfl 336 (550)
T KOG0578|consen 279 KKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVM-RDLHHPNIVNFL 336 (550)
T ss_pred hhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHH-HhccchHHHHHH
Confidence 47999999999999765 689999999776655566678999999 999999999875
No 327
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=96.07 E-value=0.0066 Score=60.72 Aligned_cols=60 Identities=18% Similarity=0.246 Sum_probs=43.4
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCC-----CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH-----SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~-----~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||.|+||.||++... +..+++|.+... .......+..|+.++ .+++||||++++
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~ 68 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLL-SKLDHPAIVKFH 68 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHH-HhCCCCcHHHHH
Confidence 334568999999999999876 345666665431 122334677899999 999999999764
No 328
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=95.94 E-value=0.0065 Score=61.94 Aligned_cols=60 Identities=18% Similarity=0.183 Sum_probs=46.0
Q ss_pred CCcCCccccccceeEEEEEEc-----CeEEEEEEccCCC----CCChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHS----LQGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~-----g~~VAVK~L~~~~----~~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
|.....||.|+||.||++... +..||||.+.... ......|.+|+.++ .++ +||||++++
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l-~~~~~~~~i~~~~ 71 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVL-EAVRRCPFLVTLH 71 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHH-HhccCCcchhhhh
Confidence 444568999999999998753 5789999985421 22345688999999 989 599998764
No 329
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=95.92 E-value=0.0084 Score=61.95 Aligned_cols=55 Identities=18% Similarity=0.053 Sum_probs=43.7
Q ss_pred ccccccceeEEEEEEcCeEEEEEEccCC--CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 535 KIGEGGYGSIYKGLLRHMQVAIKMLHPH--SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 535 ~iG~G~~G~Vykg~l~g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.+|.|+++.||++...|..||||++... .......|.+|+.++ .+++||||++++
T Consensus 9 ~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l-~~l~h~~i~~~~ 65 (314)
T cd08216 9 CFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITS-RQLQHPNILPYV 65 (314)
T ss_pred hhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHH-HhcCCcchhhhh
Confidence 4566677778888777999999998654 233456799999999 999999999864
No 330
>cd01992 PP-ATPase N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]. This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This domain has a strongly conserved motif SGGXD at the N terminus.
Probab=95.88 E-value=0.1 Score=50.03 Aligned_cols=97 Identities=20% Similarity=0.227 Sum_probs=66.1
Q ss_pred EEEEeecCChHHHHHHHHHHHHhc--CCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 46 KIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLL 123 (591)
Q Consensus 46 kIlVAVD~S~~~S~~Al~wAl~~~--~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~~ 123 (591)
+|+|++.|. ..|.-++.++.... .+.+|++|||-.... . ...+.++....
T Consensus 1 ~v~v~~SGG-~DS~vl~~l~~~~~~~~~~~v~~v~id~~~~------~---------------------~~~~~~~~~~~ 52 (185)
T cd01992 1 KILVAVSGG-PDSMALLHLLSELKPRLGLRLVAVHVDHGLR------P---------------------ESDEEAAFVAD 52 (185)
T ss_pred CEEEEeCCC-HHHHHHHHHHHHHHHHcCCcEEEEEecCCCC------c---------------------hHHHHHHHHHH
Confidence 589999999 89998888886654 256899999954321 0 00234445556
Q ss_pred HHHHcCCceEEEEEecCC---h----------HHHHHHHHHHcCCCEEEEccCCCchhhH
Q 007740 124 ICRQMGVRAEKLDTESES---T----------EKGILELISHYGIRKLVMGAAADKHYKK 170 (591)
Q Consensus 124 ~c~~~gV~~e~~vie~~~---~----------~~~Ive~a~~~~idlIVmGs~g~~~~~R 170 (591)
+|...||++..+...... . ...+.++|.+++++.|+.|.+.......
T Consensus 53 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~r~~r~~~l~~~a~~~~~~~i~~Gh~~dD~~e~ 112 (185)
T cd01992 53 LCAKLGIPLYILVVALAPKPGGNLEAAAREARYDFFAEIAKEHGADVLLTAHHADDQAET 112 (185)
T ss_pred HHHHcCCcEEEEeeccccCCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCcHHHHHH
Confidence 788889988755111111 0 1457789999999999999997654443
No 331
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=95.83 E-value=0.0064 Score=59.07 Aligned_cols=29 Identities=21% Similarity=0.220 Sum_probs=25.9
Q ss_pred CccccccceeEEEEEEc-CeEEEEEEccCC
Q 007740 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPH 562 (591)
Q Consensus 534 ~~iG~G~~G~Vykg~l~-g~~VAVK~L~~~ 562 (591)
..||.|+||.||+|... |..||||++...
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~ 32 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTS 32 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEec
Confidence 47999999999999986 899999999654
No 332
>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells. In striated muscle, tropomyosin mediate the interactions between the troponin complex and actin so as to regulate muscle contraction []. The role of tropomyosin in smooth muscle and non-muscle tissues is not clear. Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 parallel helices containing 2 sets of 7 alternating actin binding sites []. There are multiple cell-specific isoforms, created by differential splicing of the messenger RNA from one gene, but the proportions of the isoforms vary between different cell types. Muscle isoforms of tropomyosin are characterised by having 284 amino acid residues and a highly conserved N-terminal region, whereas non-muscle forms are generally smaller and are heterogeneous in their N-terminal region. This entry represents tropomyosin (Tmp) 1, 2 and 3. Within the yeast Tmp1 and Tmp2, biochemical and sequence analyses indicate that Tpm2 spans four actin monomers along a filament, whereas Tpm1 spans five. Despite its shorter length, Tpm2 can compete with Tpm1 for binding to F-actin. Over-expression of Tpm2 in vivo alters the axial budding of haploids to a bipolar pattern, and this can be partially suppressed by co-over-expression of Tpm1. This suggests distinct functions for the two tropomyosins, and indicates that the ratio between them is important for correct morphogenesis [].; PDB: 2EFR_A 2Z5H_C 2Z5I_D 2D3E_B 2EFS_D 3U59_B 1C1G_C 1IHQ_A 3AZD_B 1MV4_B ....
Probab=95.82 E-value=0.51 Score=47.56 Aligned_cols=48 Identities=21% Similarity=0.295 Sum_probs=22.1
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 430 KQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNY 477 (591)
Q Consensus 430 ~e~~~~~~el~~~~~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~~~ 477 (591)
...+++..+|..+...+...+.++.....++.+|+..+...-..|..+
T Consensus 113 ~k~~E~~rkl~~~E~~Le~aEeR~e~~E~ki~eLE~el~~~~~~lk~l 160 (237)
T PF00261_consen 113 RKYEEVERKLKVLEQELERAEERAEAAESKIKELEEELKSVGNNLKSL 160 (237)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHh
Confidence 333344444444444444444444444455555555554444444433
No 333
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=95.79 E-value=0.0014 Score=66.71 Aligned_cols=58 Identities=29% Similarity=0.371 Sum_probs=48.9
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|+...+||+|+||.|||+..+ |..||||..... ....+.+.|+.|| .++..|.+|+.+
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIM-QQC~S~yVVKYY 94 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIM-QQCKSKYVVKYY 94 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHH-HHcCCchhhhhh
Confidence 444568999999999999887 899999998544 3467899999999 999999999864
No 334
>PRK09039 hypothetical protein; Validated
Probab=95.68 E-value=1.7 Score=46.29 Aligned_cols=89 Identities=13% Similarity=0.114 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 396 RAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQ 475 (591)
Q Consensus 396 ~a~~~e~~~~ee~~~rk~~E~~l~~ek~~~~~~k~e~~~~~~el~~~~~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~ 475 (591)
.-..++.++........+.+.+++....++...+..-.+...++..++.|...|+.+++.++..+...+++....+..+.
T Consensus 96 ~r~~Le~~~~~~~~~~~~~~~~~~~l~~~L~~~k~~~se~~~~V~~L~~qI~aLr~Qla~le~~L~~ae~~~~~~~~~i~ 175 (343)
T PRK09039 96 ERSRLQALLAELAGAGAAAEGRAGELAQELDSEKQVSARALAQVELLNQQIAALRRQLAALEAALDASEKRDRESQAKIA 175 (343)
T ss_pred HHHHHHHHHhhhhhhcchHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455555553322222444555555555555555555555555555666666666666655555555555555555555
Q ss_pred HHHHHHHHH
Q 007740 476 NYKKEQDEL 484 (591)
Q Consensus 476 ~~~~~~~el 484 (591)
.+.++++..
T Consensus 176 ~L~~~L~~a 184 (343)
T PRK09039 176 DLGRRLNVA 184 (343)
T ss_pred HHHHHHHHH
Confidence 555544444
No 335
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=95.65 E-value=0.0031 Score=62.24 Aligned_cols=59 Identities=19% Similarity=0.452 Sum_probs=47.9
Q ss_pred cCCCcCCccccccceeEEEEEE--cCeEEEEEEccCCCCCChhHHHHHHHHHHcCCC-CCCccccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEVGAYESFIF-HFNLVDSF 590 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l--~g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lr-HpNLV~li 590 (591)
++|..-+++|+|.|..||.|.- .+..+.||+|.+-. .+...+|+.|| ..++ ||||++|+
T Consensus 38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL-~nL~gg~NIi~L~ 99 (338)
T KOG0668|consen 38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKIL-QNLRGGPNIIKLL 99 (338)
T ss_pred chHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHH-HhccCCCCeeehh
Confidence 3444457899999999999974 47889999997632 35688999999 8887 99999885
No 336
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=95.63 E-value=0.0048 Score=63.42 Aligned_cols=60 Identities=25% Similarity=0.383 Sum_probs=45.0
Q ss_pred CCcCCccccccceeEEEEEEc---C---eEEEEEEccCCCCC-C-hhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR---H---MQVAIKMLHPHSLQ-G-PSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~---g---~~VAVK~L~~~~~~-~-~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....||+|.||.|||+.-. + ..+|||++.....+ + ...-++|+..+ .-++|||||.|.
T Consensus 26 ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~-REl~h~nvi~Lv 93 (438)
T KOG0666|consen 26 YEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALL-RELKHPNVISLV 93 (438)
T ss_pred hhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHH-HHhcCCcchhHH
Confidence 444567999999999999543 1 36899999653221 2 34468999999 999999999874
No 337
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=95.63 E-value=0.011 Score=67.95 Aligned_cols=58 Identities=28% Similarity=0.433 Sum_probs=46.4
Q ss_pred cCCccccccceeEEEEEEc---------CeEEEEEEccCCCC-CChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 532 PSLKIGEGGYGSIYKGLLR---------HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 532 ~~~~iG~G~~G~Vykg~l~---------g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
....||+|.||.|++|.+. ...||||++..... .....|..|+.+| ..+ .|||+|.|+
T Consensus 300 ~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m-~~~g~H~niv~ll 368 (609)
T KOG0200|consen 300 LGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVL-KELGKHPNIVNLL 368 (609)
T ss_pred ccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHH-HHhcCCcchhhhe
Confidence 3448999999999999874 25799999965432 4467899999999 666 799999886
No 338
>PLN03159 cation/H(+) antiporter 15; Provisional
Probab=95.51 E-value=0.059 Score=63.98 Aligned_cols=150 Identities=10% Similarity=0.083 Sum_probs=85.8
Q ss_pred ccCCCEEEEeecCChHHHHHHHHHHHHhcC----CCeEEEEEEeCCCC-ccccc-CCCCCCCcchHHHHHHHHHHHHHHH
Q 007740 41 SVIEDKIYVAVAKQVKESKSVLLWALQNSG----GKRICIIHVHTPAQ-MIPVM-GTKFPASSLEEEKVQAYREIERQDM 114 (591)
Q Consensus 41 ~~~~~kIlVAVD~S~~~S~~Al~wAl~~~~----g~~I~llHV~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (591)
.+.+-+||++|-+. ++-...+.-+-...+ .-.|+++|+++... ..+.. ....... ... +........
T Consensus 455 ~~~elriL~cv~~~-~~v~~li~Lle~s~~t~~sp~~vy~lhLveL~~r~~~~l~~h~~~~~-----~~~-~~~~~~~~~ 527 (832)
T PLN03159 455 HDAELRMLVCVHTP-RNVPTIINLLEASHPTKRSPICIYVLHLVELTGRASAMLIVHNTRKS-----GRP-ALNRTQAQS 527 (832)
T ss_pred CCCceeEEEEeccC-CcHHHHHHHHHhcCCCCCCCceEEEEEEEeecCCCccceeeeecccc-----ccc-ccccccccc
Confidence 34577999999977 666666544322221 23699999987432 11110 0000000 000 000001123
Q ss_pred HHHHHHHHHHHHHc-CCceEEEEE--ecCChHHHHHHHHHHcCCCEEEEccCCCchhhHHhcc---CCcchHHHHhccCC
Q 007740 115 HNHLDMCLLICRQM-GVRAEKLDT--ESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMD---LKSKKAISVRQQAP 188 (591)
Q Consensus 115 ~~lL~~~~~~c~~~-gV~~e~~vi--e~~~~~~~Ive~a~~~~idlIVmGs~g~~~~~R~l~G---s~s~Va~~V~~~Ap 188 (591)
+++++.|..+.... +|.+...+. .-.++++.||.+|.+..+++||++-|....+...+-. ....+-..|+++||
T Consensus 528 ~~i~~af~~~~~~~~~v~v~~~t~vs~~~~mh~dIc~~A~d~~~slIilpfhk~~~~dg~~~~~~~~~r~~n~~VL~~Ap 607 (832)
T PLN03159 528 DHIINAFENYEQHAGCVSVQPLTAISPYSTMHEDVCNLAEDKRVSLIIIPFHKQQTVDGGMEATNPAFRGVNQNVLANAP 607 (832)
T ss_pred cHHHHHHHHHHhhcCceEEEEEEEEeCcccHHHHHHHHHHhcCCCEEEECCCCccCCCCCccccCchHHHHHHHHHccCC
Confidence 46666666666443 577664443 3458999999999999999999999964333222100 01136789999999
Q ss_pred CccEEEE-EcCC
Q 007740 189 ASCHIWF-ICNG 199 (591)
Q Consensus 189 ~~C~V~v-V~kg 199 (591)
|+|-| |.+|
T Consensus 608 --CsVgIlVDRg 617 (832)
T PLN03159 608 --CSVGILVDRG 617 (832)
T ss_pred --CCEEEEEeCC
Confidence 76543 3555
No 339
>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures]
Probab=95.48 E-value=1 Score=53.47 Aligned_cols=20 Identities=25% Similarity=0.157 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 007740 384 GKAEKDAIESIRRAKASESL 403 (591)
Q Consensus 384 ~~ae~e~~~a~~~a~~~e~~ 403 (591)
..||+.+..|-+++.+|+..
T Consensus 1608 ~~aE~~~~~a~q~~~eL~~~ 1627 (1758)
T KOG0994|consen 1608 AAAEKLATSATQQLGELETR 1627 (1758)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44666666666666666543
No 340
>PRK09039 hypothetical protein; Validated
Probab=95.48 E-value=3.9 Score=43.60 Aligned_cols=64 Identities=19% Similarity=0.170 Sum_probs=31.4
Q ss_pred HHHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 414 FEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNY 477 (591)
Q Consensus 414 ~E~~l~~ek~~~~~~k~e~~~~~~el~~~~~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~~~ 477 (591)
.+.+|+.++....+...+...+..++..++.|...++..+..+..+.++.+.++......|...
T Consensus 121 l~~~L~~~k~~~se~~~~V~~L~~qI~aLr~Qla~le~~L~~ae~~~~~~~~~i~~L~~~L~~a 184 (343)
T PRK09039 121 LAQELDSEKQVSARALAQVELLNQQIAALRRQLAALEAALDASEKRDRESQAKIADLGRRLNVA 184 (343)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444555555555555555555555555555455555554444444443
No 341
>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent.
Probab=95.40 E-value=2.4 Score=52.31 Aligned_cols=21 Identities=19% Similarity=0.260 Sum_probs=10.8
Q ss_pred EEEEeecCChHHH-HHHHHHHH
Q 007740 46 KIYVAVAKQVKES-KSVLLWAL 66 (591)
Q Consensus 46 kIlVAVD~S~~~S-~~Al~wAl 66 (591)
.++++--|+++.+ ..|+.|++
T Consensus 26 ~~i~G~NGsGKS~ildAi~~~l 47 (1164)
T TIGR02169 26 TVISGPNGSGKSNIGDAILFAL 47 (1164)
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 4555555663333 34555654
No 342
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=95.36 E-value=0.01 Score=61.21 Aligned_cols=67 Identities=21% Similarity=0.290 Sum_probs=53.8
Q ss_pred CHHHHHHhhcCCCcCCccccccceeEEEEEE--cCeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 519 SFSEIEGATHNFDPSLKIGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 519 s~~el~~aT~~F~~~~~iG~G~~G~Vykg~l--~g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+|+++-..|. ..||+|.||.|--+.. .|..+|||++............+||+++-.+--|+||+.||
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLi 142 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLI 142 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHH
Confidence 3667777775 4799999999987754 38999999998776666788899999994455899999886
No 343
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=95.35 E-value=0.013 Score=59.13 Aligned_cols=73 Identities=16% Similarity=0.256 Sum_probs=54.4
Q ss_pred CCCcccccCHHHHHHhhcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCcc
Q 007740 511 MPQFFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLV 587 (591)
Q Consensus 511 ~~~~~~~~s~~el~~aT~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV 587 (591)
.+.....|+-..|+.. ..||.|.||+|+|=.++ |...|||+++.... ....+|..|..+.-..-.-||||
T Consensus 54 ~~~~~~~F~~~~Lqdl-------g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IV 126 (361)
T KOG1006|consen 54 DDAHLHTFTSDNLQDL-------GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIV 126 (361)
T ss_pred CcccccccccchHHHH-------HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHH
Confidence 3445566776666544 36999999999998886 89999999976544 44577888886652455889999
Q ss_pred ccc
Q 007740 588 DSF 590 (591)
Q Consensus 588 ~li 590 (591)
+|+
T Consensus 127 kfy 129 (361)
T KOG1006|consen 127 KFY 129 (361)
T ss_pred HHh
Confidence 875
No 344
>PF01171 ATP_bind_3: PP-loop family; InterPro: IPR011063 This entry represents the PP-loop motif superfamily [,]. The PP-loop motif appears to be a modified version of the P-loop of nucleotide binding domain that is involved in phosphate binding []. Named PP-motif, since it appears to be a part of a previously uncharacterised ATP pyrophophatase domain. ATP sulfurylases, Escherichia coli NtrL, and Bacillus subtilis OutB consist of this domain alone. In other proteins, the pyrophosphatase domain is associated with amidotransferase domains (type I or type II), a putative citrulline-aspartate ligase domain or a nitrilase/amidase domain.; PDB: 3A2K_A 2E89_B 2E21_D 1WY5_B 1NI5_A.
Probab=95.30 E-value=0.12 Score=49.63 Aligned_cols=96 Identities=21% Similarity=0.314 Sum_probs=57.8
Q ss_pred EEEEeecCChHHHHHHHHHHHHhc--CCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 46 KIYVAVAKQVKESKSVLLWALQNS--GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLL 123 (591)
Q Consensus 46 kIlVAVD~S~~~S~~Al~wAl~~~--~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~~ 123 (591)
||+|||-|. +.|...|....+.. .+-+++++||...... . ...-......
T Consensus 1 ki~va~SGG-~DS~~Ll~~l~~~~~~~~~~~~~~~vdh~~~~---------~------------------s~~~~~~v~~ 52 (182)
T PF01171_consen 1 KILVAVSGG-KDSMALLHLLKELRRRNGIKLIAVHVDHGLRE---------E------------------SDEEAEFVEE 52 (182)
T ss_dssp EEEEE--SS-HHHHHHHHHHHHHHTTTTTEEEEEEEE-STSC---------C------------------HHHHHHHHHH
T ss_pred CEEEEEcCC-HHHHHHHHHHHHHHHhcCCCeEEEEEecCCCc---------c------------------cchhHHHHHH
Confidence 799999999 89976666555544 4669999999865320 0 0111234456
Q ss_pred HHHHcCCceEEEEEec-----CCh---H-----HHHHHHHHHcCCCEEEEccCCCchhh
Q 007740 124 ICRQMGVRAEKLDTES-----EST---E-----KGILELISHYGIRKLVMGAAADKHYK 169 (591)
Q Consensus 124 ~c~~~gV~~e~~vie~-----~~~---~-----~~Ive~a~~~~idlIVmGs~g~~~~~ 169 (591)
+|...||++....+.. ... + ..+.++|.+++++.|++|-|...-..
T Consensus 53 ~~~~~~i~~~~~~~~~~~~~~~~~e~~aR~~Ry~~l~~~a~~~g~~~i~~GHh~dD~~E 111 (182)
T PF01171_consen 53 ICEQLGIPLYIVRIDEDRKKGSNIEECARELRYQFLREIAKEEGCNKIALGHHLDDQAE 111 (182)
T ss_dssp HHHHTT-EEEEEE--CHCCTTSTCHHHHHHHHHHHHHHHHHTTT-CEEE---BHHHHHH
T ss_pred HHHhcCCceEEEEeeeeecccCCHHHHHHHHHHHHHHHhhhcccccceeecCcCCccHH
Confidence 7889999988766652 111 1 36778999999999999999765443
No 345
>PRK00106 hypothetical protein; Provisional
Probab=95.29 E-value=2.6 Score=47.43 Aligned_cols=18 Identities=28% Similarity=0.300 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 007740 362 LAQAMAEAENSRREAFEE 379 (591)
Q Consensus 362 l~~~~~e~~~~r~e~~~~ 379 (591)
+++|..+++.+++++..+
T Consensus 48 leeAe~eAe~I~keA~~E 65 (535)
T PRK00106 48 RGKAERDAEHIKKTAKRE 65 (535)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 345555555555544443
No 346
>PRK12704 phosphodiesterase; Provisional
Probab=95.26 E-value=2.7 Score=47.31 Aligned_cols=20 Identities=30% Similarity=0.287 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 007740 360 DQLAQAMAEAENSRREAFEE 379 (591)
Q Consensus 360 ~~l~~~~~e~~~~r~e~~~~ 379 (591)
..++++..+++.+++++..+
T Consensus 31 ~~l~~Ae~eAe~I~keA~~e 50 (520)
T PRK12704 31 AKIKEAEEEAKRILEEAKKE 50 (520)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34556666666666555544
No 347
>PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells. In yeast, 15 Apg proteins coordinate the formation of autophagosomes. No molecule involved in autophagy has yet been identified in higher eukaryotes []. The pre-autophagosomal structure contains at least five Apg proteins: Apg1p, Apg2p, Apg5p, Aut7p/Apg8p and Apg16p. It is found in the vacuole []. The C-terminal glycine of Apg12p is conjugated to a lysine residue of Apg5p via an isopeptide bond. During autophagy, cytoplasmic components are enclosed in autophagosomes and delivered to lysosomes/vacuoles. Auotphagy protein 16 (Apg16) has been shown to be bind to Apg5 and is required for the function of the Apg12p-Apg5p conjugate []. Autophagy protein 5 (Apg5) is directly required for the import of aminopeptidase I via the cytoplasm-to-vacuole targeting pathway []. Apg6/Vps30p has two distinct functions in the autophagic process, either associated with the membrane or in a retrieval step of the carboxypeptidase Y sorting pathway [].; GO: 0006914 autophagy; PDB: 3Q8T_A 3VP7_A 4DDP_A.
Probab=95.26 E-value=0.69 Score=48.67 Aligned_cols=34 Identities=21% Similarity=0.451 Sum_probs=13.5
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 430 KQHDEVMEELQIALDQKSLLESQIAESDQTAKEL 463 (591)
Q Consensus 430 ~e~~~~~~el~~~~~~~~~l~~~~~e~~~~~~el 463 (591)
.+..++.++|..+.++...+.+++.+...+..++
T Consensus 57 ~Ee~~l~~eL~~LE~e~~~l~~el~~le~e~~~l 90 (314)
T PF04111_consen 57 QEEEELLQELEELEKEREELDQELEELEEELEEL 90 (314)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333444444444444444444433333333
No 348
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.19 E-value=0.02 Score=64.32 Aligned_cols=64 Identities=22% Similarity=0.330 Sum_probs=50.1
Q ss_pred hhcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC---CChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 526 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 526 aT~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~---~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
..++|....+||+|.||.|+.+.+. +..+|||+|..+.. ...+....|.+|+ .-+ +||-|+.|+
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~-~la~~HPFL~~L~ 435 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIF-ELANRHPFLVNLF 435 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHH-HHhccCCeEeecc
Confidence 3467888889999999999999998 57899999976532 3355667787777 544 699999875
No 349
>COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown]
Probab=95.16 E-value=5.3 Score=42.39 Aligned_cols=11 Identities=18% Similarity=0.042 Sum_probs=4.5
Q ss_pred cCHHHHHHhhc
Q 007740 518 FSFSEIEGATH 528 (591)
Q Consensus 518 ~s~~el~~aT~ 528 (591)
.+-..+.-+|.
T Consensus 349 ~tt~r~~~~t~ 359 (499)
T COG4372 349 HTTRRRRPATR 359 (499)
T ss_pred cchhhhhhhhc
Confidence 33344444443
No 350
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=95.15 E-value=0.033 Score=66.75 Aligned_cols=67 Identities=19% Similarity=0.241 Sum_probs=52.7
Q ss_pred HHhhcCCCcCCccccccceeEEEEEEc--CeEEEEEEcc--CCCCCChhHHHHHHHHHHcCCCCCCcccccC
Q 007740 524 EGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLH--PHSLQGPSEFQQEVGAYESFIFHFNLVDSFI 591 (591)
Q Consensus 524 ~~aT~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~--~~~~~~~~~F~~Ev~il~s~lrHpNLV~li~ 591 (591)
...|-++...++||.|-||.||-+.-. |...|+|-+. +..........+|+.++ ..|.|||||+.++
T Consensus 1231 snV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vl-E~lnHpNlV~YyG 1301 (1509)
T KOG4645|consen 1231 SNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVL-EGLNHPNLVRYYG 1301 (1509)
T ss_pred ccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHH-HhccCccccccCc
Confidence 344556677899999999999999765 7788998773 33344456778999999 9999999998764
No 351
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=95.10 E-value=0.0066 Score=67.47 Aligned_cols=55 Identities=20% Similarity=0.341 Sum_probs=42.5
Q ss_pred ccccccceeEEEEEEc--CeEEEE--EEccC--CCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 535 KIGEGGYGSIYKGLLR--HMQVAI--KMLHP--HSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 535 ~iG~G~~G~Vykg~l~--g~~VAV--K~L~~--~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+||+|.|-+||||.-. |..||= .++.. .+....+.|..|+..| ..|.|||||+|+
T Consensus 47 vLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lL-KsL~H~NIirfy 107 (632)
T KOG0584|consen 47 VLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLL-KSLKHPNIIRFY 107 (632)
T ss_pred hcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHH-ccCCCCceeeee
Confidence 6999999999999875 767762 12221 2333457899999999 999999999986
No 352
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.04 E-value=1.5 Score=50.22 Aligned_cols=17 Identities=6% Similarity=0.104 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHHHHH
Q 007740 446 KSLLESQIAESDQTAKE 462 (591)
Q Consensus 446 ~~~l~~~~~e~~~~~~e 462 (591)
...|.-+++++..++.+
T Consensus 446 letLn~k~qqls~kl~D 462 (1118)
T KOG1029|consen 446 LETLNFKLQQLSGKLQD 462 (1118)
T ss_pred HHHHHHHHHHHhhhhhh
Confidence 34444444444444433
No 353
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=95.00 E-value=0.019 Score=57.56 Aligned_cols=62 Identities=6% Similarity=-0.090 Sum_probs=49.1
Q ss_pred hcCCCcCCccccccceeEEEEEEcCeEEEEEEccCCCCCChhH---------HHHHHHHHHcCCCCCCcccc
Q 007740 527 THNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSE---------FQQEVGAYESFIFHFNLVDS 589 (591)
Q Consensus 527 T~~F~~~~~iG~G~~G~Vykg~l~g~~VAVK~L~~~~~~~~~~---------F~~Ev~il~s~lrHpNLV~l 589 (591)
.++|...+++|.||||.||.....+..+|||.+++........ |.+|+..+ .+++||||..+
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l-~rL~~~GI~~~ 100 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQT-DRVRSEGLASL 100 (232)
T ss_pred hCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHH-HHHHHCCCCcc
Confidence 4678888999999999999865557789999997644333222 68999999 99999999764
No 354
>KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton]
Probab=95.00 E-value=4.7 Score=47.03 Aligned_cols=20 Identities=25% Similarity=0.192 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 007740 364 QAMAEAENSRREAFEEALRR 383 (591)
Q Consensus 364 ~~~~e~~~~r~e~~~~~~~~ 383 (591)
++..|.++||.|+-+-...+
T Consensus 383 e~~~e~eqLr~elaql~a~r 402 (980)
T KOG0980|consen 383 ENREEQEQLRNELAQLLASR 402 (980)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34444455555544443333
No 355
>PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT). These proteins share a number of features; for example, they all have coiled-coil regions and all three are associated with nuclear pores [, , ]. TPR is thought to be a component of nuclear pore complex- attached intranuclear filaments [], and is implicated in nuclear protein import []. Moreover, its N-terminal region is involved in the activation of oncogenic kinases, possibly by mediating the dimerisation of kinase domains or by targeting these kinases to the nuclear pore complex []. MLP1 and MLP2 are involved in the process of telomere length regulation, where they are thought to interact with proteins such as Tel1p and modulate their activity []. ; GO: 0006606 protein import into nucleus, 0005643 nuclear pore
Probab=94.93 E-value=2.9 Score=38.16 Aligned_cols=82 Identities=17% Similarity=0.221 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHH
Q 007740 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQ 440 (591)
Q Consensus 361 ~l~~~~~e~~~~r~e~~~~~~~~~~ae~e~~~a~~~a~~~e~~~~ee~~~rk~~E~~l~~ek~~~~~~k~e~~~~~~el~ 440 (591)
++..+..++.+++.....-......+..+.-.-...+++.+..|..|+..=.+.=..|...|+++..++.+...+..++.
T Consensus 4 e~~~l~~e~~~~~~~~~~~~~~~~~~~~dl~~q~~~a~~Aq~~YE~El~~Ha~~~~~L~~lr~e~~~~~~~~~~l~~~~~ 83 (132)
T PF07926_consen 4 ELSSLQSELQRLKEQEEDAEEQLQSLREDLESQAKIAQEAQQKYERELVKHAEDIKELQQLREELQELQQEINELKAEAE 83 (132)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555666666665555544445555555555566677777777777665445555555555555555555554444444
Q ss_pred HH
Q 007740 441 IA 442 (591)
Q Consensus 441 ~~ 442 (591)
.+
T Consensus 84 ~a 85 (132)
T PF07926_consen 84 SA 85 (132)
T ss_pred HH
Confidence 33
No 356
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.91 E-value=0.015 Score=65.45 Aligned_cols=56 Identities=23% Similarity=0.412 Sum_probs=43.4
Q ss_pred CccccccceeEEEEEEcC--eEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 534 LKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 534 ~~iG~G~~G~Vykg~l~g--~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
-+||+|.||+||-|.-.. ..+|||-+.........=+..|+..= ++++|.|||+.+
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH-~~LrHkNIVrYL 638 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALH-STLRHKNIVRYL 638 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHH-HHHhhHhHHHHh
Confidence 469999999999998875 45789988544333334467788888 999999999864
No 357
>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle.
Probab=94.90 E-value=3.9 Score=50.31 Aligned_cols=21 Identities=24% Similarity=0.322 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 007740 447 SLLESQIAESDQTAKELEQKI 467 (591)
Q Consensus 447 ~~l~~~~~e~~~~~~ele~~~ 467 (591)
..+..++.+....+.+++.++
T Consensus 883 ~~l~~~~~~~~~~~~~~~~~~ 903 (1179)
T TIGR02168 883 ASLEEALALLRSELEELSEEL 903 (1179)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333333333
No 358
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=94.87 E-value=0.013 Score=64.35 Aligned_cols=61 Identities=21% Similarity=0.278 Sum_probs=46.9
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCC---CCCChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~---~~~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
+|.-...||+|+|.+||++.-. +..+|||+|... .....+-...|=.+| .+| .||.||+|+
T Consensus 74 DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l-~~L~~hPgivkLy 140 (604)
T KOG0592|consen 74 DFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEAL-TQLSGHPGIVKLY 140 (604)
T ss_pred hcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHH-HHhhCCCCeEEEE
Confidence 3444567999999999999876 789999999652 112234456788888 888 999999986
No 359
>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1 (Q61026 from SWISSPROT), and thus enhances transcriptional activation by a number of nuclear receptors. CoCoA has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region [].
Probab=94.87 E-value=5.7 Score=44.58 Aligned_cols=78 Identities=23% Similarity=0.308 Sum_probs=35.5
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 422 KLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQ----TAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEE 497 (591)
Q Consensus 422 k~~~~~~k~e~~~~~~el~~~~~~~~~l~~~~~e~~~----~~~ele~~~~~~~~~l~~~~~~~~el~~~r~~~~~e~~~ 497 (591)
+.++++++.+++.+.+-+++...+...|+.++..... ++.+....+.+....++-.+++..+++.+++...+-+..
T Consensus 370 k~~ie~L~~el~~~e~~lqEer~E~qkL~~ql~ke~D~n~vqlsE~~rel~Elks~lrv~qkEKEql~~EkQeL~~yi~~ 449 (546)
T PF07888_consen 370 KDEIEKLSRELQMLEEHLQEERMERQKLEKQLGKEKDCNRVQLSENRRELQELKSSLRVAQKEKEQLQEEKQELLEYIER 449 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555666655556666555555555554432211 222333333333333344444444444444444444443
Q ss_pred HH
Q 007740 498 LR 499 (591)
Q Consensus 498 ~~ 499 (591)
++
T Consensus 450 Le 451 (546)
T PF07888_consen 450 LE 451 (546)
T ss_pred HH
Confidence 33
No 360
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=94.86 E-value=0.018 Score=63.61 Aligned_cols=61 Identities=20% Similarity=0.422 Sum_probs=47.4
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCC--------CChhHHHHHHHHHHcCCC---CCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--------QGPSEFQQEVGAYESFIF---HFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~--------~~~~~F~~Ev~il~s~lr---HpNLV~li 590 (591)
+|+....+|+|.||.|+.+... +..|.||++..... ....-.-.|+.|| ..+. |+||++++
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIl-a~l~~~sH~NIlKlL 635 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQIL-ATLNKHSHENILKLL 635 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHH-HHhhhcCccchhhhh
Confidence 3566778999999999999987 57899999854211 1123356799999 9998 99999986
No 361
>TIGR03319 YmdA_YtgF conserved hypothetical protein YmdA/YtgF.
Probab=94.85 E-value=4.2 Score=45.77 Aligned_cols=20 Identities=30% Similarity=0.200 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 007740 360 DQLAQAMAEAENSRREAFEE 379 (591)
Q Consensus 360 ~~l~~~~~e~~~~r~e~~~~ 379 (591)
..++++..+++.+++++..+
T Consensus 25 ~~l~~Ae~eAe~i~keA~~e 44 (514)
T TIGR03319 25 KKLGSAEELAKRIIEEAKKE 44 (514)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34455666666666555543
No 362
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=94.85 E-value=0.019 Score=62.29 Aligned_cols=58 Identities=21% Similarity=0.250 Sum_probs=43.8
Q ss_pred CcCCccccccceeEEEEE--EcCeEEEEEEccCCCCC--ChhHHHHHHHHHHcCCCCCCcccc
Q 007740 531 DPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQ--GPSEFQQEVGAYESFIFHFNLVDS 589 (591)
Q Consensus 531 ~~~~~iG~G~~G~Vykg~--l~g~~VAVK~L~~~~~~--~~~~F~~Ev~il~s~lrHpNLV~l 589 (591)
.....||.|.||.++... ..+..+++|.+.-.... ....-.+|+.++ ++++|||||..
T Consensus 7 e~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~li-s~~~hP~iv~y 68 (426)
T KOG0589|consen 7 EVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLL-SKLLHPNIVEY 68 (426)
T ss_pred hhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHH-HhccCCCeeee
Confidence 334589999999987544 44789999998654322 234568999999 99999999965
No 363
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=94.80 E-value=0.031 Score=63.16 Aligned_cols=69 Identities=19% Similarity=0.113 Sum_probs=48.2
Q ss_pred HHHHHHhhcCCCcCCccccccceeEEEEEEcCeEEEEEEccCCC--C------CChhHHHHHHHHHHcCCCCCCcccc
Q 007740 520 FSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHS--L------QGPSEFQQEVGAYESFIFHFNLVDS 589 (591)
Q Consensus 520 ~~el~~aT~~F~~~~~iG~G~~G~Vykg~l~g~~VAVK~L~~~~--~------~~~~~F~~Ev~il~s~lrHpNLV~l 589 (591)
+......+..|...+.||+|+||.||+|.+.+..+++|+..... . .....|.+|+.++ ..++|+|++..
T Consensus 325 ~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l-~~l~~~~i~~p 401 (535)
T PRK09605 325 WIKEEEVKRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLL-SEARRAGVPTP 401 (535)
T ss_pred eccccccccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHH-HhhcccCCCee
Confidence 33333444556678899999999999999987666665442211 1 1124688999999 99999998753
No 364
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=94.66 E-value=0.037 Score=53.52 Aligned_cols=53 Identities=13% Similarity=0.167 Sum_probs=40.7
Q ss_pred CccccccceeEEEEEEc-CeEEEEEEccCCCCC---------------------C-----hhHHHHHHHHHHcCCCCCCc
Q 007740 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQ---------------------G-----PSEFQQEVGAYESFIFHFNL 586 (591)
Q Consensus 534 ~~iG~G~~G~Vykg~l~-g~~VAVK~L~~~~~~---------------------~-----~~~F~~Ev~il~s~lrHpNL 586 (591)
..||.|+||.||+|... |..||||+++..... + ...+..|...+ .+++|+++
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l-~~l~~~~i 81 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNL-KRLYEAGV 81 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHH-HHHHhCCC
Confidence 46999999999999986 999999999764211 0 11235788889 89999887
Q ss_pred c
Q 007740 587 V 587 (591)
Q Consensus 587 V 587 (591)
.
T Consensus 82 ~ 82 (190)
T cd05145 82 P 82 (190)
T ss_pred C
Confidence 4
No 365
>PHA02882 putative serine/threonine kinase; Provisional
Probab=94.63 E-value=0.049 Score=56.01 Aligned_cols=61 Identities=16% Similarity=0.164 Sum_probs=38.4
Q ss_pred CCCcCCccccccceeEEEEEEcC-----eEEEEEEccCCCCCCh-----------hHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQGP-----------SEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~g-----~~VAVK~L~~~~~~~~-----------~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.|....+||+|+||.||+|...+ ..+++|+......... ..+..+...+ ..+.|+|++.++
T Consensus 13 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~-~~~~h~~i~~~~ 89 (294)
T PHA02882 13 EWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNI-HNIDHLGIPKYY 89 (294)
T ss_pred ceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHh-ccCCCCCCCcEE
Confidence 35556789999999999998763 3566665432221110 1123344456 678999998754
No 366
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=94.55 E-value=0.015 Score=58.20 Aligned_cols=60 Identities=18% Similarity=0.122 Sum_probs=49.8
Q ss_pred CCcCCccccccceeEEEEEE--cCeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l--~g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.....+|+|||..||.+.- .+..+|+|++...+..+.+.-.+|++.- .++.|||+++++
T Consensus 23 yri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~-rkf~s~~vl~l~ 84 (302)
T KOG2345|consen 23 YRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNH-RKFNSPNVLRLV 84 (302)
T ss_pred EEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHH-HhhCCcchHHHH
Confidence 34446799999999997763 3789999999877767778889999998 999999998864
No 367
>PRK12704 phosphodiesterase; Provisional
Probab=94.38 E-value=5.3 Score=45.08 Aligned_cols=8 Identities=38% Similarity=0.538 Sum_probs=4.3
Q ss_pred CCcccccc
Q 007740 533 SLKIGEGG 540 (591)
Q Consensus 533 ~~~iG~G~ 540 (591)
+.+||+.|
T Consensus 223 griigreG 230 (520)
T PRK12704 223 GRIIGREG 230 (520)
T ss_pred cceeCCCc
Confidence 35566554
No 368
>TIGR03319 YmdA_YtgF conserved hypothetical protein YmdA/YtgF.
Probab=94.38 E-value=4.6 Score=45.45 Aligned_cols=8 Identities=38% Similarity=0.538 Sum_probs=4.6
Q ss_pred CCcccccc
Q 007740 533 SLKIGEGG 540 (591)
Q Consensus 533 ~~~iG~G~ 540 (591)
+.+||+.|
T Consensus 217 griigreG 224 (514)
T TIGR03319 217 GRIIGREG 224 (514)
T ss_pred ccccCCCc
Confidence 45666655
No 369
>PRK04863 mukB cell division protein MukB; Provisional
Probab=94.37 E-value=4.2 Score=51.31 Aligned_cols=17 Identities=18% Similarity=0.333 Sum_probs=11.5
Q ss_pred ccccCHHHHHHhhcCCC
Q 007740 515 FSDFSFSEIEGATHNFD 531 (591)
Q Consensus 515 ~~~~s~~el~~aT~~F~ 531 (591)
...++.++|.....+|.
T Consensus 432 ~~~~SdEeLe~~LenF~ 448 (1486)
T PRK04863 432 LPDLTADNAEDWLEEFQ 448 (1486)
T ss_pred CCCCCHHHHHHHHHHHH
Confidence 34677777777666664
No 370
>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells. In striated muscle, tropomyosin mediate the interactions between the troponin complex and actin so as to regulate muscle contraction []. The role of tropomyosin in smooth muscle and non-muscle tissues is not clear. Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 parallel helices containing 2 sets of 7 alternating actin binding sites []. There are multiple cell-specific isoforms, created by differential splicing of the messenger RNA from one gene, but the proportions of the isoforms vary between different cell types. Muscle isoforms of tropomyosin are characterised by having 284 amino acid residues and a highly conserved N-terminal region, whereas non-muscle forms are generally smaller and are heterogeneous in their N-terminal region. This entry represents tropomyosin (Tmp) 1, 2 and 3. Within the yeast Tmp1 and Tmp2, biochemical and sequence analyses indicate that Tpm2 spans four actin monomers along a filament, whereas Tpm1 spans five. Despite its shorter length, Tpm2 can compete with Tpm1 for binding to F-actin. Over-expression of Tpm2 in vivo alters the axial budding of haploids to a bipolar pattern, and this can be partially suppressed by co-over-expression of Tpm1. This suggests distinct functions for the two tropomyosins, and indicates that the ratio between them is important for correct morphogenesis [].; PDB: 2EFR_A 2Z5H_C 2Z5I_D 2D3E_B 2EFS_D 3U59_B 1C1G_C 1IHQ_A 3AZD_B 1MV4_B ....
Probab=94.28 E-value=6.7 Score=39.51 Aligned_cols=88 Identities=26% Similarity=0.294 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 381 LRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTA 460 (591)
Q Consensus 381 ~~~~~ae~e~~~a~~~a~~~e~~~~ee~~~rk~~E~~l~~ek~~~~~~k~e~~~~~~el~~~~~~~~~l~~~~~e~~~~~ 460 (591)
.+....+..+-.|...+...+..|.+-.++-..++..|.+.....+........+..+|..+......++.....+..+.
T Consensus 92 eri~~lE~~l~ea~~~~ee~e~k~~E~~rkl~~~E~~Le~aEeR~e~~E~ki~eLE~el~~~~~~lk~lE~~~~~~~~re 171 (237)
T PF00261_consen 92 ERIEELEQQLKEAKRRAEEAERKYEEVERKLKVLEQELERAEERAEAAESKIKELEEELKSVGNNLKSLEASEEKASERE 171 (237)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhhhhhhhhHHH
Confidence 44455667777777888888888777777777777777777666666666666666666666555544444444444333
Q ss_pred HHHHHHHH
Q 007740 461 KELEQKII 468 (591)
Q Consensus 461 ~ele~~~~ 468 (591)
..++.++.
T Consensus 172 ~~~e~~i~ 179 (237)
T PF00261_consen 172 DEYEEKIR 179 (237)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 371
>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells. In striated muscle, tropomyosin mediate the interactions between the troponin complex and actin so as to regulate muscle contraction []. The role of tropomyosin in smooth muscle and non-muscle tissues is not clear. Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 parallel helices containing 2 sets of 7 alternating actin binding sites []. There are multiple cell-specific isoforms, created by differential splicing of the messenger RNA from one gene, but the proportions of the isoforms vary between different cell types. Muscle isoforms of tropomyosin are characterised by having 284 amino acid residues and a highly conserved N-terminal region, whereas non-muscle forms are generally smaller and are heterogeneous in their N-terminal region. This entry represents tropomyosin (Tmp) 1, 2 and 3. Within the yeast Tmp1 and Tmp2, biochemical and sequence analyses indicate that Tpm2 spans four actin monomers along a filament, whereas Tpm1 spans five. Despite its shorter length, Tpm2 can compete with Tpm1 for binding to F-actin. Over-expression of Tpm2 in vivo alters the axial budding of haploids to a bipolar pattern, and this can be partially suppressed by co-over-expression of Tpm1. This suggests distinct functions for the two tropomyosins, and indicates that the ratio between them is important for correct morphogenesis [].
Probab=94.26 E-value=4.6 Score=37.51 Aligned_cols=46 Identities=26% Similarity=0.424 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 444 DQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERD 489 (591)
Q Consensus 444 ~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~~~~~~~~el~~~r~ 489 (591)
++...|+.++..+...+.+...++..+......+.+....|..+++
T Consensus 80 rriq~LEeele~ae~~L~e~~ekl~e~d~~ae~~eRkv~~le~~~~ 125 (143)
T PF12718_consen 80 RRIQLLEEELEEAEKKLKETTEKLREADVKAEHFERKVKALEQERD 125 (143)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhHH
Confidence 3333444444444444444444444443333333344444433333
No 372
>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only]
Probab=94.22 E-value=1.8 Score=42.53 Aligned_cols=24 Identities=21% Similarity=0.170 Sum_probs=16.8
Q ss_pred ccccCHHHHHHhhcCCCcCCcccc
Q 007740 515 FSDFSFSEIEGATHNFDPSLKIGE 538 (591)
Q Consensus 515 ~~~~s~~el~~aT~~F~~~~~iG~ 538 (591)
...|.+.++..-|-+..+..+-|.
T Consensus 210 ~e~~~i~dl~~et~~l~p~die~~ 233 (290)
T COG4026 210 PEEELISDLVKETLNLAPKDIEGQ 233 (290)
T ss_pred hHHHHHHHHHHHHhccCchhccce
Confidence 457788888887877776655443
No 373
>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]
Probab=94.17 E-value=7.1 Score=39.34 Aligned_cols=55 Identities=27% Similarity=0.299 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 432 HDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQM 486 (591)
Q Consensus 432 ~~~~~~el~~~~~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~~~~~~~~el~~ 486 (591)
...+..+++.++++...|+.++.+....+..++.++......+..+.+...+.+.
T Consensus 91 ~~aL~~E~~~ak~r~~~le~el~~l~~~~~~l~~~i~~l~~~~~~~e~~~~e~~~ 145 (239)
T COG1579 91 LRALNIEIQIAKERINSLEDELAELMEEIEKLEKEIEDLKERLERLEKNLAEAEA 145 (239)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666666677777777777777666666666666666666655555544443
No 374
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=94.15 E-value=0.0098 Score=66.61 Aligned_cols=63 Identities=27% Similarity=0.403 Sum_probs=51.3
Q ss_pred hcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 527 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 527 T~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.++|.....+|.|.||.|||++-. |...|||++.-.......-.++|+-++ .-++|||||.++
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~-~dc~h~nivay~ 78 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGML-RDCRHPNIVAYF 78 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeee-ecCCCcChHHHH
Confidence 345666678999999999999865 789999998765555566678999999 999999999764
No 375
>KOG2891 consensus Surface glycoprotein [General function prediction only]
Probab=94.05 E-value=7.7 Score=39.36 Aligned_cols=24 Identities=25% Similarity=0.290 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 364 QAMAEAENSRREAFEEALRRGKAE 387 (591)
Q Consensus 364 ~~~~e~~~~r~e~~~~~~~~~~ae 387 (591)
....|.++||+|-.+---++..+|
T Consensus 282 rrqieterlrqeeeelnikk~e~~ 305 (445)
T KOG2891|consen 282 RRQIETERLRQEEEELNIKKAEAC 305 (445)
T ss_pred HhhhhHHHHhhhHhhhhhhHHHhh
Confidence 455677788877665544555555
No 376
>PRK00106 hypothetical protein; Provisional
Probab=94.00 E-value=6.2 Score=44.47 Aligned_cols=7 Identities=43% Similarity=0.596 Sum_probs=3.5
Q ss_pred Ccccccc
Q 007740 534 LKIGEGG 540 (591)
Q Consensus 534 ~~iG~G~ 540 (591)
.+||+-|
T Consensus 239 riIGreG 245 (535)
T PRK00106 239 RIIGREG 245 (535)
T ss_pred ceeCCCc
Confidence 4555544
No 377
>PRK02224 chromosome segregation protein; Provisional
Probab=93.96 E-value=7.9 Score=46.53 Aligned_cols=7 Identities=0% Similarity=-0.552 Sum_probs=2.6
Q ss_pred HHHHHhc
Q 007740 63 LWALQNS 69 (591)
Q Consensus 63 ~wAl~~~ 69 (591)
.|-..++
T Consensus 116 ~~i~~ll 122 (880)
T PRK02224 116 EEVTELL 122 (880)
T ss_pred HHHHHHH
Confidence 3433333
No 378
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=93.92 E-value=0.031 Score=57.27 Aligned_cols=60 Identities=18% Similarity=0.229 Sum_probs=47.2
Q ss_pred CCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCC---hhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~---~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|.-...||.|+||.|...... |.-+|+|+|.....-. .+...+|-.+| ..+.||.||+|.
T Consensus 46 fe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL-~~v~~PFlv~l~ 110 (355)
T KOG0616|consen 46 FERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVL-KAVSHPFLVKLY 110 (355)
T ss_pred hhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHH-hhccCceeEEEE
Confidence 444568999999999988876 7889999996643222 34467899999 999999999875
No 379
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=93.73 E-value=0.0046 Score=61.88 Aligned_cols=56 Identities=27% Similarity=0.466 Sum_probs=42.6
Q ss_pred CccccccceeEEEEEEc--CeEEEEEEccCCC-CCC-hhHHHHHHHHHHcCCCCCCccccc
Q 007740 534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQG-PSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 534 ~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~-~~~-~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.+||.|.||.||++... |..||+|+.--.. ..+ ...-.+|+.+| ..+.|+|+|.||
T Consensus 23 ~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL-~~lkHenv~nli 82 (376)
T KOG0669|consen 23 AKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKIL-QLLKHENVVNLI 82 (376)
T ss_pred HhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHH-HHhcchhHHHHH
Confidence 47999999999999886 6789987663221 111 23347899999 999999999875
No 380
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=93.72 E-value=0.0024 Score=63.62 Aligned_cols=56 Identities=16% Similarity=0.306 Sum_probs=44.7
Q ss_pred CccccccceeEEEEEEc--CeEEEEEEccC--CCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 534 LKIGEGGYGSIYKGLLR--HMQVAIKMLHP--HSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 534 ~~iG~G~~G~Vykg~l~--g~~VAVK~L~~--~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
..||+|.|..||++... |+.+|+|+++. .+..+.+...+|+.|- ..+.|||||+|.
T Consensus 17 e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC-~~LqHP~IvrL~ 76 (355)
T KOG0033|consen 17 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC-RKLQHPNIVRLH 76 (355)
T ss_pred HHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHH-HhcCCCcEeehh
Confidence 47999999999998765 77888887754 2334567788999998 899999999874
No 381
>KOG0243 consensus Kinesin-like protein [Cytoskeleton]
Probab=93.62 E-value=9.6 Score=45.68 Aligned_cols=18 Identities=22% Similarity=0.266 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 007740 362 LAQAMAEAENSRREAFEE 379 (591)
Q Consensus 362 l~~~~~e~~~~r~e~~~~ 379 (591)
+++...|+++||.+++..
T Consensus 406 lKd~~~EIerLK~dl~Aa 423 (1041)
T KOG0243|consen 406 LKDLYEEIERLKRDLAAA 423 (1041)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 678999999999998744
No 382
>COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown]
Probab=93.38 E-value=13 Score=39.67 Aligned_cols=17 Identities=24% Similarity=0.106 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHHHH
Q 007740 361 QLAQAMAEAENSRREAF 377 (591)
Q Consensus 361 ~l~~~~~e~~~~r~e~~ 377 (591)
+|+++...++.+|-|+.
T Consensus 75 qlddi~~qlr~~rtel~ 91 (499)
T COG4372 75 QLDDIRPQLRALRTELG 91 (499)
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 44555555555555554
No 383
>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [].
Probab=93.38 E-value=12 Score=39.49 Aligned_cols=7 Identities=29% Similarity=0.572 Sum_probs=2.8
Q ss_pred cCHHHHH
Q 007740 518 FSFSEIE 524 (591)
Q Consensus 518 ~s~~el~ 524 (591)
++..|+.
T Consensus 273 ~t~~Ev~ 279 (325)
T PF08317_consen 273 WTRSEVK 279 (325)
T ss_pred CCHHHHH
Confidence 3444443
No 384
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=93.31 E-value=0.051 Score=58.01 Aligned_cols=56 Identities=27% Similarity=0.319 Sum_probs=46.1
Q ss_pred CccccccceeEEEEEEcC--eEEEEEEccCCCC---CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 534 LKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL---QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 534 ~~iG~G~~G~Vykg~l~g--~~VAVK~L~~~~~---~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
..||.|.-|+||.+.++| ...|+|+++.... ......+.|-+|| +.+.||-|++|+
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL-~~lDHPFlPTLY 143 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREIL-SLLDHPFLPTLY 143 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHH-HhcCCCccchhh
Confidence 479999999999999985 7899999976433 2245567788899 999999999886
No 385
>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1 (Q61026 from SWISSPROT), and thus enhances transcriptional activation by a number of nuclear receptors. CoCoA has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region [].
Probab=93.24 E-value=17 Score=40.83 Aligned_cols=8 Identities=38% Similarity=0.463 Sum_probs=3.0
Q ss_pred HHHHHHHH
Q 007740 361 QLAQAMAE 368 (591)
Q Consensus 361 ~l~~~~~e 368 (591)
+++++..|
T Consensus 144 qlE~~qkE 151 (546)
T PF07888_consen 144 QLEECQKE 151 (546)
T ss_pred HHHHHHHH
Confidence 33333333
No 386
>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair]
Probab=93.19 E-value=17 Score=43.80 Aligned_cols=18 Identities=6% Similarity=0.268 Sum_probs=12.6
Q ss_pred EEEEccCCCchhhHHhcc
Q 007740 157 KLVMGAAADKHYKKKMMD 174 (591)
Q Consensus 157 lIVmGs~g~~~~~R~l~G 174 (591)
-|.|-.+|.++|.--++|
T Consensus 113 sItL~N~G~~Afk~eiyG 130 (1074)
T KOG0250|consen 113 SITLSNSGLDAFKPEIYG 130 (1074)
T ss_pred EEEEecCCcccCChhhcC
Confidence 456677888888766665
No 387
>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]
Probab=93.18 E-value=13 Score=46.30 Aligned_cols=9 Identities=22% Similarity=0.431 Sum_probs=3.9
Q ss_pred cccccceeE
Q 007740 536 IGEGGYGSI 544 (591)
Q Consensus 536 iG~G~~G~V 544 (591)
|..||-|..
T Consensus 1029 L~~GG~a~L 1037 (1163)
T COG1196 1029 LFGGGTAEL 1037 (1163)
T ss_pred hCCCCeeEE
Confidence 334444443
No 388
>cd01993 Alpha_ANH_like_II This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=93.11 E-value=0.68 Score=44.09 Aligned_cols=96 Identities=17% Similarity=0.186 Sum_probs=63.4
Q ss_pred EEEEeecCChHHHHHHHHHHHHhcC----CCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 007740 46 KIYVAVAKQVKESKSVLLWALQNSG----GKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMC 121 (591)
Q Consensus 46 kIlVAVD~S~~~S~~Al~wAl~~~~----g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~ 121 (591)
+|+|++-|. ..|-.++.++..... +-.|+++||...... .. .......
T Consensus 1 ~v~v~~SGG-~DS~~ll~~l~~~~~~~~~~~~~~~~~~d~~~~~--------~~-------------------~~~~~~~ 52 (185)
T cd01993 1 RILVALSGG-KDSLVLLHVLKKLQRRYPYGFELEALTVDEGIPG--------YR-------------------DESLEVV 52 (185)
T ss_pred CEEEEeCCC-HHHHHHHHHHHHHHhhcCCCeEEEEEEEECCCCC--------Cc-------------------HHHHHHH
Confidence 589999999 889888877766543 558999999754310 00 0112233
Q ss_pred HHHHHHcCCceEEEEEec---------------------CChHHHHHHHHHHcCCCEEEEccCCCchhh
Q 007740 122 LLICRQMGVRAEKLDTES---------------------ESTEKGILELISHYGIRKLVMGAAADKHYK 169 (591)
Q Consensus 122 ~~~c~~~gV~~e~~vie~---------------------~~~~~~Ive~a~~~~idlIVmGs~g~~~~~ 169 (591)
..+|...||++..+.+.. .-....+.++|.+++++.|+.|.+...-..
T Consensus 53 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~r~~~l~~~a~~~g~~~l~~Gh~~dD~~e 121 (185)
T cd01993 53 ERLAEELGIELEIVSFKEEYTDDIEVKKRGGKSPCSLCGVLRRGLLNKIAKELGADKLATGHNLDDEAE 121 (185)
T ss_pred HHHHHHcCCceEEEehhhhcchhhhhhccCCCCCCCccHHHHHHHHHHHHHHcCCCEEEEcCChHHHHH
Confidence 456777788877654431 001246678899999999999999764443
No 389
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=93.08 E-value=0.079 Score=59.35 Aligned_cols=49 Identities=20% Similarity=0.250 Sum_probs=37.9
Q ss_pred cCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCC
Q 007740 532 PSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIF 582 (591)
Q Consensus 532 ~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lr 582 (591)
-...||+|.||.|.|+.-. +..||||++...... ..+=+.|+.|| ..|+
T Consensus 190 V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f-~~Q~~~Ei~iL-~~ln 240 (586)
T KOG0667|consen 190 VLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRF-LRQAQIEIRIL-ELLN 240 (586)
T ss_pred EEEEecccccceeEEEEecCCCcEEEEEeeccChHH-HHHHHHHHHHH-HHHh
Confidence 3568999999999999876 689999999654322 23446789999 8887
No 390
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=93.04 E-value=0.042 Score=63.13 Aligned_cols=58 Identities=24% Similarity=0.349 Sum_probs=44.1
Q ss_pred CCcCCccccccce-eEEEEEEcCeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 530 FDPSLKIGEGGYG-SIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G-~Vykg~l~g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
|+...++|.|.-| .||+|.+.|+.||||+|-... ..--++||..|...=.|||||+++
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyy 569 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYEGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYY 569 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeCCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEE
Confidence 5666678888877 469999999999999984321 123378999884556899999875
No 391
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=93.01 E-value=0.13 Score=49.86 Aligned_cols=56 Identities=20% Similarity=0.175 Sum_probs=40.3
Q ss_pred CCcCCccccccceeEEEEEEc-CeEEEEEEccCCCC--C--------------------ChhHHHHHHHHHHcCCCCCCc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSL--Q--------------------GPSEFQQEVGAYESFIFHFNL 586 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~-g~~VAVK~L~~~~~--~--------------------~~~~F~~Ev~il~s~lrHpNL 586 (591)
+...+.||.|+||.||++... |..||||++..... . ....+..|..++ .++.|+|+
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l-~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL-KALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH-HHHHHcCC
Confidence 444578999999999999886 89999998754220 0 012356788888 77877753
No 392
>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]
Probab=92.94 E-value=16 Score=43.39 Aligned_cols=17 Identities=29% Similarity=0.452 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHhHHHHH
Q 007740 410 RRKEFEEALANGKLELE 426 (591)
Q Consensus 410 ~rk~~E~~l~~ek~~~~ 426 (591)
+.++++..+...++.++
T Consensus 788 rlkdl~keik~~k~~~e 804 (1174)
T KOG0933|consen 788 RLKDLEKEIKTAKQRAE 804 (1174)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33344444433333333
No 393
>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair]
Probab=92.90 E-value=16 Score=43.98 Aligned_cols=10 Identities=30% Similarity=0.461 Sum_probs=5.7
Q ss_pred HHHHHhhcCC
Q 007740 521 SEIEGATHNF 530 (591)
Q Consensus 521 ~el~~aT~~F 530 (591)
..|...+..|
T Consensus 482 ~~I~r~~~~f 491 (1074)
T KOG0250|consen 482 RAIERRKRRF 491 (1074)
T ss_pred HHHHHHHhcC
Confidence 4555556666
No 394
>PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin []. Ezrin was first identified as a constituent of microvilli [], radixin as a barbed, end-capping actin-modulating protein from isolated junctional fractions [], and moesin as a heparin binding protein []. A tumour suppressor molecule responsible for neurofibromatosis type 2 (NF2) is highly similar to ERM proteins and has been designated merlin (moesin-ezrin-radixin-like protein). ERM molecules contain 3 domains, an N-terminal globular domain; an extended alpha-helical domain; and a charged C-terminal domain []. Ezrin, radixin and merlin also contain a polyproline region between the helical and C-terminal domains. The N-terminal domain is highly conserved, and is also found in merlin, band 4.1 proteins and members of the band 4.1 superfamily. ERM proteins crosslink actin filaments with plasma membranes. They co-localise with CD44 at actin filament-plasma membrane interaction sites, associating with CD44 via their N-terminal domains and with actin filaments via their C-terminal domains [].; GO: 0008092 cytoskeletal protein binding, 0005737 cytoplasm, 0019898 extrinsic to membrane; PDB: 2I1J_A 2I1K_A 1E5W_A 1EF1_C.
Probab=92.79 E-value=11 Score=38.28 Aligned_cols=35 Identities=20% Similarity=0.301 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 444 DQKSLLESQIAESDQTAKELEQKIISAVELLQNYK 478 (591)
Q Consensus 444 ~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~~~~ 478 (591)
..+..|+.++.+....+..++............++
T Consensus 75 eEk~~Le~e~~e~~~~i~~l~ee~~~ke~Ea~~lq 109 (246)
T PF00769_consen 75 EEKEQLEQELREAEAEIARLEEESERKEEEAEELQ 109 (246)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555555555555555554443333333333
No 395
>KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton]
Probab=92.59 E-value=26 Score=41.18 Aligned_cols=20 Identities=10% Similarity=0.360 Sum_probs=8.0
Q ss_pred HHHHHhHHHHHHHHHHHHHH
Q 007740 426 ERMKKQHDEVMEELQIALDQ 445 (591)
Q Consensus 426 ~~~k~e~~~~~~el~~~~~~ 445 (591)
.++..++..+.++..++.+|
T Consensus 434 t~l~~~h~~lL~K~~di~kQ 453 (980)
T KOG0980|consen 434 TELRQEHADLLRKYDDIQKQ 453 (980)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33333444444444443333
No 396
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]
Probab=92.55 E-value=17 Score=46.83 Aligned_cols=57 Identities=16% Similarity=0.280 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHH-----HHcCCceEEEEEecCChHH---------HHHHHHHHcCCCEEEEccCCCchhhHH
Q 007740 111 RQDMHNHLDMCLLIC-----RQMGVRAEKLDTESESTEK---------GILELISHYGIRKLVMGAAADKHYKKK 171 (591)
Q Consensus 111 ~~~~~~lL~~~~~~c-----~~~gV~~e~~vie~~~~~~---------~Ive~a~~~~idlIVmGs~g~~~~~R~ 171 (591)
-++.+.+|....-.. .+.||....+- -|-|... ||+-+.++. .+|-|+.-.+.+.++
T Consensus 475 nEkLQqfFnh~mFvlEqeeY~~EgIew~fid-fG~Dlq~~idLIEkp~Gi~slLdEE---c~~PkAtd~tf~~kL 545 (1930)
T KOG0161|consen 475 NEKLQQFFNHHMFVLEQEEYQREGIEWDFID-FGLDLQPTIDLIEKPMGILSLLDEE---CVVPKATDKTFLEKL 545 (1930)
T ss_pred HHHHHhhhcchhhhhhHHHHHHhCCceeeec-cccchhhhHHHHhchhhHHHHHHHH---HhcCCCccchHHHHH
Confidence 345555665543332 24477754332 2323222 555555443 456666655555444
No 397
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=92.49 E-value=1.5 Score=44.77 Aligned_cols=95 Identities=16% Similarity=0.249 Sum_probs=62.8
Q ss_pred CCEEEEeecCChHHHHHHHHHHHHhc--C--CCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 007740 44 EDKIYVAVAKQVKESKSVLLWALQNS--G--GKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLD 119 (591)
Q Consensus 44 ~~kIlVAVD~S~~~S~~Al~wAl~~~--~--g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~ 119 (591)
+++|+||+-|. ..|...|.|+.... . +-+|+.|||..... + .. + +.
T Consensus 29 ~~kilVa~SGG-~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~------~-~~-----------------~---~~-- 78 (258)
T PRK10696 29 GDRVMVCLSGG-KDSYTLLDILLNLQKRAPINFELVAVNLDQKQP------G-FP-----------------E---HV-- 78 (258)
T ss_pred CCEEEEEecCC-HHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCC------C-CC-----------------H---HH--
Confidence 56999999999 88987777765533 1 34788888753211 1 00 0 01
Q ss_pred HHHHHHHHcCCceEEEEEec-----------CCh--------HHHHHHHHHHcCCCEEEEccCCCchhh
Q 007740 120 MCLLICRQMGVRAEKLDTES-----------EST--------EKGILELISHYGIRKLVMGAAADKHYK 169 (591)
Q Consensus 120 ~~~~~c~~~gV~~e~~vie~-----------~~~--------~~~Ive~a~~~~idlIVmGs~g~~~~~ 169 (591)
...+|...||++..+.+.. ..+ ...+.++|.++++|.|++|.|......
T Consensus 79 -~~~~~~~lgI~~~v~~~~~~~~~~~~~~~~~~~c~~c~~~R~~~l~~~a~~~g~~~Ia~GH~~dD~~E 146 (258)
T PRK10696 79 -LPEYLESLGVPYHIEEQDTYSIVKEKIPEGKTTCSLCSRLRRGILYRTARELGATKIALGHHRDDILE 146 (258)
T ss_pred -HHHHHHHhCCCEEEEEecchhhhhhhhccCCChhHHHHHHHHHHHHHHHHHcCCCEEEEcCchHHHHH
Confidence 2567999999987554321 011 135678899999999999999866444
No 398
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=92.36 E-value=0.13 Score=59.57 Aligned_cols=70 Identities=26% Similarity=0.430 Sum_probs=52.0
Q ss_pred HHHHHHhhcCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 520 FSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 520 ~~el~~aT~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+..+-..++-|.....||.|.||.||++.-. |+.+|||+++.+... .++...|-+||.....|||++.++
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fy 82 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFY 82 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEE
Confidence 3334445556666678999999999998775 789999999876543 355667777774466999999875
No 399
>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures]
Probab=92.28 E-value=24 Score=42.73 Aligned_cols=39 Identities=18% Similarity=0.047 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKA 399 (591)
Q Consensus 361 ~l~~~~~e~~~~r~e~~~~~~~~~~ae~e~~~a~~~a~~ 399 (591)
...++..++.....|+.+.+.|-..|..++-+|+++|+.
T Consensus 1416 ~A~~~~~~l~~~~ae~eq~~~~v~ea~~~aseA~~~Aq~ 1454 (1758)
T KOG0994|consen 1416 MAGDADTQLRSKLAEAEQTLSMVREAKLSASEAQQSAQR 1454 (1758)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 334555555555566666666666666666666555544
No 400
>PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a family of proteins which appears to have a highly conserved zinc finger domain at the C-terminal end, described as -C-X2-CH-X3-H-X5-C-X2-C-. The structure is predicted to contain a coiled coil. Members of this family are annotated as being tumour-associated antigen HCA127 in humans, but this could not be confirmed.
Probab=92.28 E-value=7.1 Score=39.19 Aligned_cols=56 Identities=20% Similarity=0.253 Sum_probs=31.7
Q ss_pred HHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 416 EALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAV 471 (591)
Q Consensus 416 ~~l~~ek~~~~~~k~e~~~~~~el~~~~~~~~~l~~~~~e~~~~~~ele~~~~~~~ 471 (591)
..|...+.+++.+..|+....++|+++.+.+..++.-+.++.......+..+....
T Consensus 32 ~~L~e~~kE~~~L~~Er~~h~eeLrqI~~DIn~lE~iIkqa~~er~~~~~~i~r~~ 87 (230)
T PF10146_consen 32 KCLEEYRKEMEELLQERMAHVEELRQINQDINTLENIIKQAESERNKRQEKIQRLY 87 (230)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445555555555555667776666666666666666555555444443333
No 401
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=92.22 E-value=0.053 Score=54.96 Aligned_cols=61 Identities=21% Similarity=0.295 Sum_probs=48.0
Q ss_pred CCCcCCccccccceeEEEEEEc--CeEEEEEEccCC--CCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~--~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+..+++-||-|.||.||.-+-+ |+.||.|++... +...-+.|-+|+..| +..+|.|++.++
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmL-cfFkHdNVLSaL 118 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKML-SSFRHDNVLSLL 118 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHH-HhhccccHHHHH
Confidence 3567889999999999988775 899999988431 222346788999999 999999987543
No 402
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=92.22 E-value=0.2 Score=47.66 Aligned_cols=29 Identities=28% Similarity=0.322 Sum_probs=25.7
Q ss_pred CccccccceeEEEEEEc-CeEEEEEEccCC
Q 007740 534 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPH 562 (591)
Q Consensus 534 ~~iG~G~~G~Vykg~l~-g~~VAVK~L~~~ 562 (591)
+.||+|+||.||++... |..||||++.+.
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~ 32 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTG 32 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecC
Confidence 57999999999999987 899999998653
No 403
>COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning]
Probab=92.17 E-value=20 Score=38.96 Aligned_cols=17 Identities=18% Similarity=0.153 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHHHHHH
Q 007740 362 LAQAMAEAENSRREAFE 378 (591)
Q Consensus 362 l~~~~~e~~~~r~e~~~ 378 (591)
|++.+.|+..+..++.+
T Consensus 68 lk~~e~~i~~~~~ql~~ 84 (420)
T COG4942 68 LKSLETEIASLEAQLIE 84 (420)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33334444333333333
No 404
>COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning]
Probab=92.09 E-value=21 Score=38.89 Aligned_cols=40 Identities=23% Similarity=0.150 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 360 DQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKA 399 (591)
Q Consensus 360 ~~l~~~~~e~~~~r~e~~~~~~~~~~ae~e~~~a~~~a~~ 399 (591)
++|++...|++.+.+++.+......+.+.++-+.......
T Consensus 38 ~~l~q~q~ei~~~~~~i~~~~~~~~kL~~~lk~~e~~i~~ 77 (420)
T COG4942 38 KQLKQIQKEIAALEKKIREQQDQRAKLEKQLKSLETEIAS 77 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777888888777777766666666666555554444333
No 405
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=92.02 E-value=0.11 Score=58.66 Aligned_cols=59 Identities=20% Similarity=0.293 Sum_probs=47.1
Q ss_pred CcCCccccccceeEEEEEEc--CeEEEEEEccCCCC---CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 531 DPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 531 ~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~---~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.....||.|+-|.|-.|+.. |+.+|||++..... .......+|+.|| .-|.|||++.|+
T Consensus 15 kLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviM-kLi~HpnVl~Ly 78 (786)
T KOG0588|consen 15 KLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIM-KLIEHPNVLRLY 78 (786)
T ss_pred eccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHH-HHhcCCCeeeee
Confidence 34567999999999988876 89999999965422 2234567999999 889999999886
No 406
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=91.93 E-value=0.3 Score=49.36 Aligned_cols=64 Identities=13% Similarity=0.161 Sum_probs=39.7
Q ss_pred HHHHhhcCCCcCCcc--ccccceeEEEEEEc--CeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 522 EIEGATHNFDPSLKI--GEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 522 el~~aT~~F~~~~~i--G~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
++..-.++|...+.+ |.|+||.||++... |..+|+|.+....... +..++..+ . ..|||+++++
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---~e~~~~~~-~-~~h~~iv~~~ 75 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA---IEPMVHQL-M-KDNPNFIKLY 75 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch---hhHHHHHH-h-hcCCCEEEEE
Confidence 334444555554555 99999999999875 6889999985432111 11122222 1 2799999764
No 407
>PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore []. Most of the kinetochore/centromere functions appear to depend upon binding of the C-terminal part of the molecule, whereas the N-terminal part, here, may be a cytoplasmic player in controlling the function of microtubules and dynein [].
Probab=91.65 E-value=10 Score=38.57 Aligned_cols=103 Identities=15% Similarity=0.250 Sum_probs=55.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH-------HHH
Q 007740 357 NLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELE-------RMK 429 (591)
Q Consensus 357 ~~~~~l~~~~~e~~~~r~e~~~~~~~~~~ae~e~~~a~~~a~~~e~~~~ee~~~rk~~E~~l~~ek~~~~-------~~k 429 (591)
..-.++++++.-+++|++|-.+.-.... -+|++|.+.|+..+ .++
T Consensus 15 ~aLqKIqelE~QldkLkKE~qQrQfQle----------------------------SlEAaLqKQKqK~e~ek~e~s~Lk 66 (307)
T PF10481_consen 15 RALQKIQELEQQLDKLKKERQQRQFQLE----------------------------SLEAALQKQKQKVEEEKNEYSALK 66 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHH----------------------------HHHHHHHHHHHHHHHHhhhhhhhh
Confidence 4566777777777888877665422221 22333333333333 333
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 430 KQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQME 487 (591)
Q Consensus 430 ~e~~~~~~el~~~~~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~~~~~~~~el~~~ 487 (591)
++..-+.+....+.+.+..+...++....++.-+|.++......+..+.+++..+..+
T Consensus 67 REnq~l~e~c~~lek~rqKlshdlq~Ke~qv~~lEgQl~s~Kkqie~Leqelkr~KsE 124 (307)
T PF10481_consen 67 RENQSLMESCENLEKTRQKLSHDLQVKESQVNFLEGQLNSCKKQIEKLEQELKRCKSE 124 (307)
T ss_pred hhhhhHHHHHHHHHHHHHHhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444555555556666666667777776666665555554444333
No 408
>PRK04863 mukB cell division protein MukB; Provisional
Probab=91.59 E-value=14 Score=46.77 Aligned_cols=124 Identities=19% Similarity=0.232 Sum_probs=75.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----HHHHHHHHHh
Q 007740 357 NLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANG-----KLELERMKKQ 431 (591)
Q Consensus 357 ~~~~~l~~~~~e~~~~r~e~~~~~~~~~~ae~e~~~a~~~a~~~e~~~~ee~~~rk~~E~~l~~e-----k~~~~~~k~e 431 (591)
.+..+|++-+..++.....+++. ..+++.+...+.+....+...+..-.+..++.+..|... -..-++....
T Consensus 985 ~~~~~Le~~Le~iE~~~~~areq---l~qaq~q~~q~~q~l~slksslq~~~e~L~E~eqe~~~~g~~~~~~~~~~~~~~ 1061 (1486)
T PRK04863 985 DLNEKLRQRLEQAEQERTRAREQ---LRQAQAQLAQYNQVLASLKSSYDAKRQMLQELKQELQDLGVPADSGAEERARAR 1061 (1486)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCccHHHHHHHh
Confidence 45555555555555555555554 334455555555555556555554444445555555443 1122334444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 432 HDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDE 483 (591)
Q Consensus 432 ~~~~~~el~~~~~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~~~~~~~~e 483 (591)
.+++..+|.....+...|++++.-....+..+..++......+..++.....
T Consensus 1062 ~~~l~~~l~~~~~~~~~~~~~~~~re~EIe~L~kkL~~~~~e~~~~re~I~~ 1113 (1486)
T PRK04863 1062 RDELHARLSANRSRRNQLEKQLTFCEAEMDNLTKKLRKLERDYHEMREQVVN 1113 (1486)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5778888888888888888888888888888887777776655555544433
No 409
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]
Probab=91.59 E-value=30 Score=44.75 Aligned_cols=12 Identities=8% Similarity=-0.011 Sum_probs=4.8
Q ss_pred ccCCCccEEEEE
Q 007740 185 QQAPASCHIWFI 196 (591)
Q Consensus 185 ~~Ap~~C~V~vV 196 (591)
..-|+|...+|.
T Consensus 656 ~T~phFvRCiIP 667 (1930)
T KOG0161|consen 656 STHPHFVRCIIP 667 (1930)
T ss_pred cCCCceeEEecc
Confidence 333444444433
No 410
>PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin []. Ezrin was first identified as a constituent of microvilli [], radixin as a barbed, end-capping actin-modulating protein from isolated junctional fractions [], and moesin as a heparin binding protein []. A tumour suppressor molecule responsible for neurofibromatosis type 2 (NF2) is highly similar to ERM proteins and has been designated merlin (moesin-ezrin-radixin-like protein). ERM molecules contain 3 domains, an N-terminal globular domain; an extended alpha-helical domain; and a charged C-terminal domain []. Ezrin, radixin and merlin also contain a polyproline region between the helical and C-terminal domains. The N-terminal domain is highly conserved, and is also found in merlin, band 4.1 proteins and members of the band 4.1 superfamily. ERM proteins crosslink actin filaments with plasma membranes. They co-localise with CD44 at actin filament-plasma membrane interaction sites, associating with CD44 via their N-terminal domains and with actin filaments via their C-terminal domains [].; GO: 0008092 cytoskeletal protein binding, 0005737 cytoplasm, 0019898 extrinsic to membrane; PDB: 2I1J_A 2I1K_A 1E5W_A 1EF1_C.
Probab=91.40 E-value=18 Score=36.74 Aligned_cols=13 Identities=23% Similarity=0.049 Sum_probs=5.4
Q ss_pred HHHHHHHHHHHHH
Q 007740 388 KDAIESIRRAKAS 400 (591)
Q Consensus 388 ~e~~~a~~~a~~~ 400 (591)
.++..+..+|..|
T Consensus 26 ~~L~e~e~~a~~L 38 (246)
T PF00769_consen 26 EALEESEETAEEL 38 (246)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333444444444
No 411
>COG0037 MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle control, cell division, chromosome partitioning]
Probab=91.37 E-value=1.6 Score=45.06 Aligned_cols=99 Identities=17% Similarity=0.227 Sum_probs=62.3
Q ss_pred CCEEEEeecCChHHHHHHHHHHHHhcCCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 44 EDKIYVAVAKQVKESKSVLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLL 123 (591)
Q Consensus 44 ~~kIlVAVD~S~~~S~~Al~wAl~~~~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~~ 123 (591)
+.+|+|||-|. +.|..+|....+....-.+.++||.+.... . . .........
T Consensus 21 ~~~ilVavSGG-kDS~~ll~~L~~l~~~~~~~a~~Vd~~~~~-----~---~-------------------~~~~~~~~~ 72 (298)
T COG0037 21 EYKILVAVSGG-KDSLALLHLLKELGRRIEVEAVHVDHGLRG-----Y---S-------------------DQEAELVEK 72 (298)
T ss_pred CCeEEEEeCCC-hHHHHHHHHHHHhccCceEEEEEecCCCCC-----c---c-------------------chHHHHHHH
Confidence 57999999999 899877765544432268999999865421 0 0 112223345
Q ss_pred HHHHcCCceEEEEEecCC---------h--------HHHHHHHHHHcCCCEEEEccCCCchhhH
Q 007740 124 ICRQMGVRAEKLDTESES---------T--------EKGILELISHYGIRKLVMGAAADKHYKK 170 (591)
Q Consensus 124 ~c~~~gV~~e~~vie~~~---------~--------~~~Ive~a~~~~idlIVmGs~g~~~~~R 170 (591)
+|...|++....-+...- + ...+-++|.++|+|.|+.|-|...-..-
T Consensus 73 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~c~~c~~~R~~~l~~~a~~~g~~~i~tgH~~dD~~et 136 (298)
T COG0037 73 LCEKLGIPLIVERVTDDLGRETLDGKSICAACRRLRRGLLYKIAKELGADKIATGHHLDDQAET 136 (298)
T ss_pred HHHHhCCceEEEEEEeeccccccCCCChhHHHHHHHHHHHHHHHHHcCCCeEEeccCcHHHHHH
Confidence 677777643322222111 1 1246678999999999999998765543
No 412
>TIGR00268 conserved hypothetical protein TIGR00268. The N-terminal region of the model shows similarity to Argininosuccinate synthase proteins using PSI-blast and using the recognize protein identification server.
Probab=91.25 E-value=1.5 Score=44.62 Aligned_cols=91 Identities=19% Similarity=0.280 Sum_probs=59.5
Q ss_pred CCEEEEeecCChHHHHHHHHHHHHhcCCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 44 EDKIYVAVAKQVKESKSVLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLL 123 (591)
Q Consensus 44 ~~kIlVAVD~S~~~S~~Al~wAl~~~~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~~ 123 (591)
.++|+||+-|- ..|--++.+|.+. |..|+.||+..+.. +. .-++.+..
T Consensus 12 ~~~vlVa~SGG-vDSs~ll~la~~~--g~~v~av~~~~~~~---------~~--------------------~e~~~a~~ 59 (252)
T TIGR00268 12 FKKVLIAYSGG-VDSSLLAAVCSDA--GTEVLAITVVSPSI---------SP--------------------RELEDAII 59 (252)
T ss_pred cCCEEEEecCc-HHHHHHHHHHHHh--CCCEEEEEecCCCC---------CH--------------------HHHHHHHH
Confidence 36899999999 7888888887664 67899999964321 10 01223345
Q ss_pred HHHHcCCceEEEEEec-----------------CChHHHHHHHHHHcCCCEEEEccCCCc
Q 007740 124 ICRQMGVRAEKLDTES-----------------ESTEKGILELISHYGIRKLVMGAAADK 166 (591)
Q Consensus 124 ~c~~~gV~~e~~vie~-----------------~~~~~~Ive~a~~~~idlIVmGs~g~~ 166 (591)
+|...||+...+-+.. ......+.++|.+++++.|+.|++...
T Consensus 60 ~a~~lgi~~~ii~~~~~~~~~~~n~~~~c~~ck~~~~~~l~~~A~~~g~~~I~~G~n~dD 119 (252)
T TIGR00268 60 IAKEIGVNHEFVKIDKMINPFRANVEERCYFCKKMVLSILVKEAEKRGYDVVVDGTNADD 119 (252)
T ss_pred HHHHcCCCEEEEEcHHHHHHHHhCCCcccchhhHHHHHHHHHHHHHcCCCEEEECCCCcc
Confidence 6777777765433211 112335667888999999999987643
No 413
>smart00787 Spc7 Spc7 kinetochore protein. This domain is found in cell division proteins which are required for kinetochore-spindle association.
Probab=91.19 E-value=22 Score=37.41 Aligned_cols=8 Identities=63% Similarity=1.120 Sum_probs=3.4
Q ss_pred ccCHHHHH
Q 007740 517 DFSFSEIE 524 (591)
Q Consensus 517 ~~s~~el~ 524 (591)
.|+..|+.
T Consensus 267 ~~t~~Ei~ 274 (312)
T smart00787 267 GFTFKEIE 274 (312)
T ss_pred CCCHHHHH
Confidence 44444443
No 414
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=91.08 E-value=0.094 Score=54.44 Aligned_cols=61 Identities=21% Similarity=0.190 Sum_probs=47.4
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCCCCCChhH---HHHHHHHHHcCCCCCCcccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSE---FQQEVGAYESFIFHFNLVDS 589 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~~~~~~~~---F~~Ev~il~s~lrHpNLV~l 589 (591)
++|+-..+||+|.||.|..+.-. |..+|||+|.....-...+ -..|-++| ...+||-|..|
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL-~~~~HPFLt~L 233 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVL-QNCRHPFLTSL 233 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHH-HhccCcHHHHh
Confidence 45777789999999999988775 8899999997654333333 36788999 99999988654
No 415
>PRK02224 chromosome segregation protein; Provisional
Probab=91.04 E-value=32 Score=41.34 Aligned_cols=21 Identities=24% Similarity=0.227 Sum_probs=9.4
Q ss_pred EEEEeecCChHHHH-HHHHHHH
Q 007740 46 KIYVAVAKQVKESK-SVLLWAL 66 (591)
Q Consensus 46 kIlVAVD~S~~~S~-~Al~wAl 66 (591)
.++++--|+++.+- .|+.||+
T Consensus 26 ~~i~G~Ng~GKStil~ai~~~l 47 (880)
T PRK02224 26 TVIHGVNGSGKSSLLEACFFAL 47 (880)
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 45555555533332 3445543
No 416
>PRK03918 chromosome segregation protein; Provisional
Probab=91.03 E-value=36 Score=40.83 Aligned_cols=7 Identities=29% Similarity=0.771 Sum_probs=3.0
Q ss_pred EEEccCC
Q 007740 158 LVMGAAA 164 (591)
Q Consensus 158 IVmGs~g 164 (591)
+|+|..|
T Consensus 27 ~i~G~nG 33 (880)
T PRK03918 27 LIIGQNG 33 (880)
T ss_pred EEEcCCC
Confidence 3444443
No 417
>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]
Probab=90.94 E-value=29 Score=42.14 Aligned_cols=11 Identities=27% Similarity=0.256 Sum_probs=6.0
Q ss_pred eeeeecCCCCC
Q 007740 201 LIYTREGSLDG 211 (591)
Q Consensus 201 ~~~~R~a~~~~ 211 (591)
++.+|.|.+..
T Consensus 185 ~~ItRtA~~~N 195 (1293)
T KOG0996|consen 185 FTITRTAFRDN 195 (1293)
T ss_pred eEEEehhhhCC
Confidence 34566665543
No 418
>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells. In striated muscle, tropomyosin mediate the interactions between the troponin complex and actin so as to regulate muscle contraction []. The role of tropomyosin in smooth muscle and non-muscle tissues is not clear. Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 parallel helices containing 2 sets of 7 alternating actin binding sites []. There are multiple cell-specific isoforms, created by differential splicing of the messenger RNA from one gene, but the proportions of the isoforms vary between different cell types. Muscle isoforms of tropomyosin are characterised by having 284 amino acid residues and a highly conserved N-terminal region, whereas non-muscle forms are generally smaller and are heterogeneous in their N-terminal region. This entry represents tropomyosin (Tmp) 1, 2 and 3. Within the yeast Tmp1 and Tmp2, biochemical and sequence analyses indicate that Tpm2 spans four actin monomers along a filament, whereas Tpm1 spans five. Despite its shorter length, Tpm2 can compete with Tpm1 for binding to F-actin. Over-expression of Tpm2 in vivo alters the axial budding of haploids to a bipolar pattern, and this can be partially suppressed by co-over-expression of Tpm1. This suggests distinct functions for the two tropomyosins, and indicates that the ratio between them is important for correct morphogenesis [].
Probab=90.89 E-value=13 Score=34.40 Aligned_cols=27 Identities=15% Similarity=0.185 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 456 SDQTAKELEQKIISAVELLQNYKKEQD 482 (591)
Q Consensus 456 ~~~~~~ele~~~~~~~~~l~~~~~~~~ 482 (591)
+.+++.-||+++..+...|.....+++
T Consensus 78 l~rriq~LEeele~ae~~L~e~~ekl~ 104 (143)
T PF12718_consen 78 LNRRIQLLEEELEEAEKKLKETTEKLR 104 (143)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555555555444444444333
No 419
>PRK12342 hypothetical protein; Provisional
Probab=90.84 E-value=1.4 Score=45.01 Aligned_cols=117 Identities=14% Similarity=0.062 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHhc-CCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCceEE
Q 007740 56 KESKSVLLWALQNS-GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLLICRQMGVRAEK 134 (591)
Q Consensus 56 ~~S~~Al~wAl~~~-~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~~~c~~~gV~~e~ 134 (591)
..-.+||+.|+.+- .|.+|++|++=++. ....+++..+..+-...+|.+..
T Consensus 35 p~D~~AlE~AlrLk~~g~~Vtvls~Gp~~----------------------------a~~~~l~r~alamGaD~avli~d 86 (254)
T PRK12342 35 QFDLNAIEAASQLATDGDEIAALTVGGSL----------------------------LQNSKVRKDVLSRGPHSLYLVQD 86 (254)
T ss_pred hhhHHHHHHHHHHhhcCCEEEEEEeCCCh----------------------------HhHHHHHHHHHHcCCCEEEEEec
Confidence 56778999998876 57899999885442 11112334443333333333322
Q ss_pred EEEecCCh---HHHHHHHHHHcCCCEEEEccCCCchhhHHhccCCcchHHHHhccCCCccEE----EEEcCCceeeeecC
Q 007740 135 LDTESEST---EKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHI----WFICNGNLIYTREG 207 (591)
Q Consensus 135 ~vie~~~~---~~~Ive~a~~~~idlIVmGs~g~~~~~R~l~Gs~s~Va~~V~~~Ap~~C~V----~vV~kgk~~~~R~a 207 (591)
-.+.+.|+ +..|..++++.++|+|+.|...-.+.... |+-.+...---+|-- +-+..|++..+|+-
T Consensus 87 ~~~~g~D~~ata~~La~~i~~~~~DLVl~G~~s~D~~tgq-------vg~~lA~~Lg~P~vt~v~~~~~~~~~~~v~r~~ 159 (254)
T PRK12342 87 AQLEHALPLDTAKALAAAIEKIGFDLLLFGEGSGDLYAQQ-------VGLLLGELLQLPVINAVSKIQRQGNKLIVERTL 159 (254)
T ss_pred CccCCCCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCCCC-------HHHHHHHHhCCCcEeeEEEEEEeCCEEEEEEEc
Confidence 22234566 78999999999999999997753332211 222222222212322 33457787777864
No 420
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=90.73 E-value=0.32 Score=43.30 Aligned_cols=52 Identities=10% Similarity=0.059 Sum_probs=41.3
Q ss_pred CccccccceeEEEEEEcCeEEEEEEccCCCCCChhHHHHHHHHHHcCCCCC--Cccc
Q 007740 534 LKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEVGAYESFIFHF--NLVD 588 (591)
Q Consensus 534 ~~iG~G~~G~Vykg~l~g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~lrHp--NLV~ 588 (591)
..||.|.++.||++...+..++||....... ...|..|+.++ ..++|. ++.+
T Consensus 4 ~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~--~~~~~~e~~~~-~~l~~~~~~~p~ 57 (155)
T cd05120 4 KLLKGGLTNRVYLLGTKDEDYVLKINPSREK--GADREREVAIL-QLLARKGLPVPK 57 (155)
T ss_pred eecccccccceEEEEecCCeEEEEecCCCCc--hhHHHHHHHHH-HHHHHcCCCCCe
Confidence 4689999999999999888999999865432 45789999998 888764 4444
No 421
>KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton]
Probab=90.43 E-value=18 Score=35.11 Aligned_cols=133 Identities=18% Similarity=0.192 Sum_probs=72.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHH
Q 007740 357 NLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVM 436 (591)
Q Consensus 357 ~~~~~l~~~~~e~~~~r~e~~~~~~~~~~ae~e~~~a~~~a~~~e~~~~ee~~~rk~~E~~l~~ek~~~~~~k~e~~~~~ 436 (591)
.++.+++-+..|+++....+..-..+-..+++.+....+..+-+++.-..-...-...+..|...|.--+..-+..++..
T Consensus 8 ~lnrri~~leeele~aqErl~~a~~KL~Eaeq~~dE~er~~Kv~enr~~kdEE~~e~~e~qLkEAk~iaE~adrK~eEVa 87 (205)
T KOG1003|consen 8 ALNRRIQLLEEELDRAQERLATALQKLEEAEQAADESERGMKVIENRAQKLEEKMEAQEAQLKEAKHIAEKADRKYEEVA 87 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46666666677766666555555555555666555555555555543333322233444444444433344444455555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 437 EELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERD 489 (591)
Q Consensus 437 ~el~~~~~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~~~~~~~~el~~~r~ 489 (591)
..|-.+.......+.++.-....+.+|+..+......+.++...-+.+....+
T Consensus 88 rkL~iiE~dLE~~eeraE~~Es~~~eLeEe~~~~~~nlk~l~~~ee~~~q~~d 140 (205)
T KOG1003|consen 88 RKLVIIEGELERAEERAEAAESQSEELEEDLRILDSNLKSLSAKEEKLEQKEE 140 (205)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHhhhHH
Confidence 55555555566666555555566667777776666666666555444443333
No 422
>PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore []. Most of the kinetochore/centromere functions appear to depend upon binding of the C-terminal part of the molecule, whereas the N-terminal part, here, may be a cytoplasmic player in controlling the function of microtubules and dynein [].
Probab=90.32 E-value=19 Score=36.62 Aligned_cols=108 Identities=18% Similarity=0.186 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 392 ESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDE-------VMEELQIALDQKSLLESQIAESDQTAKELE 464 (591)
Q Consensus 392 ~a~~~a~~~e~~~~ee~~~rk~~E~~l~~ek~~~~~~k~e~~~-------~~~el~~~~~~~~~l~~~~~e~~~~~~ele 464 (591)
.|.+++.++|.....=.+.++...-.|....+.+++.|+..+. +.++++.+.+....+++..+.+...+.-.+
T Consensus 15 ~aLqKIqelE~QldkLkKE~qQrQfQleSlEAaLqKQKqK~e~ek~e~s~LkREnq~l~e~c~~lek~rqKlshdlq~Ke 94 (307)
T PF10481_consen 15 RALQKIQELEQQLDKLKKERQQRQFQLESLEAALQKQKQKVEEEKNEYSALKRENQSLMESCENLEKTRQKLSHDLQVKE 94 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHhhHHHhhhH
Confidence 4566777766554333333333333344444555555544432 445555555555555555555555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 465 QKIISAVELLQNYKKEQDELQMERDKAVKEAEELR 499 (591)
Q Consensus 465 ~~~~~~~~~l~~~~~~~~el~~~r~~~~~e~~~~~ 499 (591)
.++.-...+|...+..++.|..+-.+...+.+...
T Consensus 95 ~qv~~lEgQl~s~Kkqie~Leqelkr~KsELErsQ 129 (307)
T PF10481_consen 95 SQVNFLEGQLNSCKKQIEKLEQELKRCKSELERSQ 129 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666666666666665555555555433
No 423
>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]
Probab=90.27 E-value=35 Score=41.50 Aligned_cols=7 Identities=29% Similarity=0.487 Sum_probs=4.0
Q ss_pred ccEEEEE
Q 007740 190 SCHIWFI 196 (591)
Q Consensus 190 ~C~V~vV 196 (591)
+|.|-|-
T Consensus 159 SCsV~vh 165 (1293)
T KOG0996|consen 159 SCSVEVH 165 (1293)
T ss_pred ceeEEEe
Confidence 3776553
No 424
>smart00090 RIO RIO-like kinase.
Probab=90.16 E-value=0.24 Score=49.90 Aligned_cols=55 Identities=15% Similarity=0.137 Sum_probs=39.3
Q ss_pred CCcCCccccccceeEEEEE--E-cCeEEEEEEccCCCCC-------------------C-----hhHHHHHHHHHHcCCC
Q 007740 530 FDPSLKIGEGGYGSIYKGL--L-RHMQVAIKMLHPHSLQ-------------------G-----PSEFQQEVGAYESFIF 582 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~--l-~g~~VAVK~L~~~~~~-------------------~-----~~~F~~Ev~il~s~lr 582 (591)
|.....||.|+||.||+|. . .|..||||.+...... . ...+..|..++ .++.
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L-~~L~ 108 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNL-QRLY 108 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHH-HHHH
Confidence 4455689999999999998 3 3899999998653210 0 12356899888 8886
Q ss_pred CCC
Q 007740 583 HFN 585 (591)
Q Consensus 583 HpN 585 (591)
|.+
T Consensus 109 ~~~ 111 (237)
T smart00090 109 EAG 111 (237)
T ss_pred hcC
Confidence 543
No 425
>PF09304 Cortex-I_coil: Cortexillin I, coiled coil; InterPro: IPR015383 This domain is predominantly found in the actin-bundling protein cortexillin I from Dictyostelium discoideum (Slime mold). The domain has a structure consisting of an 18-heptad-repeat alpha-helical coiled-coil, and is a prerequisite for the assembly of Cortexillin I []. ; PDB: 1D7M_A.
Probab=90.13 E-value=12 Score=32.71 Aligned_cols=65 Identities=28% Similarity=0.307 Sum_probs=30.2
Q ss_pred HHHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 414 FEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQ 485 (591)
Q Consensus 414 ~E~~l~~ek~~~~~~k~e~~~~~~el~~~~~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~~~~~~~~el~ 485 (591)
++..|..+|....++..+++.+..-++.++.+.....++ +.+|+.++..+...+...+....+++
T Consensus 21 Le~slE~~K~S~~eL~kqkd~L~~~l~~L~~q~~s~~qr-------~~eLqaki~ea~~~le~eK~ak~~l~ 85 (107)
T PF09304_consen 21 LERSLEDEKTSQGELAKQKDQLRNALQSLQAQNASRNQR-------IAELQAKIDEARRNLEDEKQAKLELE 85 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHhHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334444444455555555555555555555444444 44455555444444444333333333
No 426
>KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning]
Probab=90.08 E-value=38 Score=40.41 Aligned_cols=79 Identities=18% Similarity=0.143 Sum_probs=39.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007740 356 DNLYDQLAQAMAEAENSRREAF--------------EEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANG 421 (591)
Q Consensus 356 ~~~~~~l~~~~~e~~~~r~e~~--------------~~~~~~~~ae~e~~~a~~~a~~~e~~~~ee~~~rk~~E~~l~~e 421 (591)
+.+++.+++++.+++.+..++. +-..++.++-+....-.-+++.++....-..++|......|..-
T Consensus 254 ~~~~~~~~~~~d~~~~~~~~i~ele~~l~~l~~ekeq~~a~~t~~~k~kt~lel~~kdlq~~i~~n~q~r~~~l~~l~~~ 333 (1200)
T KOG0964|consen 254 EQYIDALDKVEDESEDLKCEIKELENKLTNLREEKEQLKARETKISKKKTKLELKIKDLQDQITGNEQQRNLALHVLQKV 333 (1200)
T ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhhhhHHHHHHHH
Confidence 3566666666666666654433 22222233323333333345666666655555555555555554
Q ss_pred HHHHHHHHHhHHH
Q 007740 422 KLELERMKKQHDE 434 (591)
Q Consensus 422 k~~~~~~k~e~~~ 434 (591)
+..+++.+.++.+
T Consensus 334 ~~ki~e~~~EL~~ 346 (1200)
T KOG0964|consen 334 KDKIEEKKDELSK 346 (1200)
T ss_pred HHHHHHHHHHHHH
Confidence 4444444444443
No 427
>TIGR02680 conserved hypothetical protein TIGR02680. Members of this protein family belong to a conserved gene four-gene neighborhood found sporadically in a phylogenetically broad range of bacteria: Nocardia farcinica, Symbiobacterium thermophilum, and Streptomyces avermitilis (Actinobacteria), Geobacillus kaustophilus (Firmicutes), Azoarcus sp. EbN1 and Ralstonia solanacearum (Betaproteobacteria). Proteins in this family average over 1400 amino acids in length.
Probab=90.01 E-value=42 Score=42.53 Aligned_cols=11 Identities=0% Similarity=-0.170 Sum_probs=7.2
Q ss_pred CCEEEEeecCC
Q 007740 44 EDKIYVAVAKQ 54 (591)
Q Consensus 44 ~~kIlVAVD~S 54 (591)
+..+++.--||
T Consensus 25 g~~~~~G~NGs 35 (1353)
T TIGR02680 25 GRLLLRGNNGA 35 (1353)
T ss_pred CeEEEECCCCC
Confidence 35666677777
No 428
>PRK10884 SH3 domain-containing protein; Provisional
Probab=89.87 E-value=6.6 Score=38.76 Aligned_cols=23 Identities=17% Similarity=0.071 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 007740 462 ELEQKIISAVELLQNYKKEQDEL 484 (591)
Q Consensus 462 ele~~~~~~~~~l~~~~~~~~el 484 (591)
+|+++......++..++.+.+.+
T Consensus 136 ~L~~~n~~L~~~l~~~~~~~~~l 158 (206)
T PRK10884 136 GLKEENQKLKNQLIVAQKKVDAA 158 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333333
No 429
>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure]
Probab=89.79 E-value=33 Score=38.69 Aligned_cols=94 Identities=20% Similarity=0.131 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHhHHHHHHHHHhHHHHH
Q 007740 364 QAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAE-------ELKRRKEFEEALANGKLELERMKKQHDEVM 436 (591)
Q Consensus 364 ~~~~e~~~~r~e~~~~~~~~~~ae~e~~~a~~~a~~~e~~~~e-------e~~~rk~~E~~l~~ek~~~~~~k~e~~~~~ 436 (591)
.++.++.+|+-|+.+-..++.++++....+..++..+...+.+ =.++.+.+|+.+...|.+..++..+++.+.
T Consensus 110 ~~e~ei~kl~~e~~elr~~~~~~~k~~~~~re~~~~~~~~l~~leAe~~~~krr~~~le~e~~~Lk~en~rl~~~l~~~r 189 (546)
T KOG0977|consen 110 KLEIEITKLREELKELRKKLEKAEKERRGAREKLDDYLSRLSELEAEINTLKRRIKALEDELKRLKAENSRLREELARAR 189 (546)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 4556666666666666566666666666665555543322222 122333444444444444444444444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 007740 437 EELQIALDQKSLLESQIAESD 457 (591)
Q Consensus 437 ~el~~~~~~~~~l~~~~~e~~ 457 (591)
.++....-.+..++.+.+.+.
T Consensus 190 ~~ld~Etllr~d~~n~~q~Ll 210 (546)
T KOG0977|consen 190 KQLDDETLLRVDLQNRVQTLL 210 (546)
T ss_pred HHHHHHHHHHHHHHhHHHHHH
Confidence 444444333344444444433
No 430
>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues. HAP1 binds to huntingtin in a polyglutamine repeat-length-dependent manner. However, its possible role in the pathogenesis of Huntingtons disease is unclear. This family also includes a similar N-terminal conserved region from hypothetical protein products of ALS2CR3 genes found in the human juvenile amyotrophic lateral sclerosis critical region 2q33-2q34 [].
Probab=89.63 E-value=29 Score=36.27 Aligned_cols=23 Identities=30% Similarity=0.355 Sum_probs=19.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Q 007740 356 DNLYDQLAQAMAEAENSRREAFE 378 (591)
Q Consensus 356 ~~~~~~l~~~~~e~~~~r~e~~~ 378 (591)
+.+-++++..+.|-..||.|+-+
T Consensus 163 e~Lq~Klk~LEeEN~~LR~Ea~~ 185 (306)
T PF04849_consen 163 EALQEKLKSLEEENEQLRSEASQ 185 (306)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 47888899999999999988763
No 431
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=89.61 E-value=0.25 Score=56.23 Aligned_cols=36 Identities=28% Similarity=0.472 Sum_probs=31.0
Q ss_pred hhcCCCcCCccccccceeEEEEEEc------CeEEEEEEccC
Q 007740 526 ATHNFDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHP 561 (591)
Q Consensus 526 aT~~F~~~~~iG~G~~G~Vykg~l~------g~~VAVK~L~~ 561 (591)
.+++|...+.||+|+||.||+|... +..||||++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~ 171 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATE 171 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecc
Confidence 5678888899999999999999985 46899998854
No 432
>TIGR02680 conserved hypothetical protein TIGR02680. Members of this protein family belong to a conserved gene four-gene neighborhood found sporadically in a phylogenetically broad range of bacteria: Nocardia farcinica, Symbiobacterium thermophilum, and Streptomyces avermitilis (Actinobacteria), Geobacillus kaustophilus (Firmicutes), Azoarcus sp. EbN1 and Ralstonia solanacearum (Betaproteobacteria). Proteins in this family average over 1400 amino acids in length.
Probab=89.55 E-value=59 Score=41.25 Aligned_cols=20 Identities=35% Similarity=0.222 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 007740 384 GKAEKDAIESIRRAKASESL 403 (591)
Q Consensus 384 ~~ae~e~~~a~~~a~~~e~~ 403 (591)
+.+......+.++..+++..
T Consensus 871 ~~A~~~~~~a~~~le~ae~~ 890 (1353)
T TIGR02680 871 RHAATRAAEQRARAARAESD 890 (1353)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444333
No 433
>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]
Probab=89.40 E-value=45 Score=39.99 Aligned_cols=18 Identities=28% Similarity=0.401 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 007740 362 LAQAMAEAENSRREAFEE 379 (591)
Q Consensus 362 l~~~~~e~~~~r~e~~~~ 379 (591)
++....+++.++.+++++
T Consensus 743 ~~~~~e~v~e~~~~Ike~ 760 (1174)
T KOG0933|consen 743 LKELLEEVEESEQQIKEK 760 (1174)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344444444444444443
No 434
>KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning]
Probab=89.29 E-value=26 Score=41.70 Aligned_cols=135 Identities=17% Similarity=0.116 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HH--HHHHHHHHHHHHHHhHHHHHHHHHh
Q 007740 358 LYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLY----AE--ELKRRKEFEEALANGKLELERMKKQ 431 (591)
Q Consensus 358 ~~~~l~~~~~e~~~~r~e~~~~~~~~~~ae~e~~~a~~~a~~~e~~~----~e--e~~~rk~~E~~l~~ek~~~~~~k~e 431 (591)
....|+.+..+++..+.|+..-.-+|...-.+..--+.+...+++.. .. +-.|=.-.+++-.|-+.++++++.-
T Consensus 326 ~l~~l~~~~~ki~e~~~EL~~I~Pky~~l~~ee~~~~~rl~~l~~~~~~l~~Kqgr~sqFssk~eRDkwir~ei~~l~~~ 405 (1200)
T KOG0964|consen 326 ALHVLQKVKDKIEEKKDELSKIEPKYNSLVDEEKRLKKRLAKLEQKQRDLLAKQGRYSQFSSKEERDKWIRSEIEKLKRG 405 (1200)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhccccccCcHHHHHHHHHHHHHHHHHH
Confidence 34456677777777777777766666554443333333333333211 00 0001111133333444444444433
Q ss_pred HHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 432 HDEVME-------ELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAV 492 (591)
Q Consensus 432 ~~~~~~-------el~~~~~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~~~~~~~~el~~~r~~~~ 492 (591)
.+...+ ++..+..+..+...++.++...+.+...++........++++++++++..|..+-
T Consensus 406 i~~~ke~e~~lq~e~~~~e~~l~~~~e~i~~l~~si~e~~~r~~~~~~~~~~~k~~~del~~~Rk~lW 473 (1200)
T KOG0964|consen 406 INDTKEQENILQKEIEDLESELKEKLEEIKELESSINETKGRMEEFDAENTELKRELDELQDKRKELW 473 (1200)
T ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333 3333333333333333333333444444444444455555666666665554333
No 435
>KOG4364 consensus Chromatin assembly factor-I [Chromatin structure and dynamics]
Probab=89.13 E-value=47 Score=37.99 Aligned_cols=23 Identities=35% Similarity=0.408 Sum_probs=14.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Q 007740 356 DNLYDQLAQAMAEAENSRREAFE 378 (591)
Q Consensus 356 ~~~~~~l~~~~~e~~~~r~e~~~ 378 (591)
..+..++...+.|.++.|++-.+
T Consensus 246 ~l~~KQ~rk~meEreK~R~erEr 268 (811)
T KOG4364|consen 246 KLLLKQLRKNMEEREKERKERER 268 (811)
T ss_pred hHHHHHHHHhHHHHHHHHHHHHH
Confidence 34556666677777777766554
No 436
>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure]
Probab=89.00 E-value=33 Score=38.70 Aligned_cols=33 Identities=21% Similarity=0.357 Sum_probs=14.6
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 422 KLELERMKKQHDEVMEELQIALDQKSLLESQIA 454 (591)
Q Consensus 422 k~~~~~~k~e~~~~~~el~~~~~~~~~l~~~~~ 454 (591)
..++...+.....+..++..++.+...+..+++
T Consensus 154 eAe~~~~krr~~~le~e~~~Lk~en~rl~~~l~ 186 (546)
T KOG0977|consen 154 EAEINTLKRRIKALEDELKRLKAENSRLREELA 186 (546)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 344444444444444444444444444444433
No 437
>PF05262 Borrelia_P83: Borrelia P83/100 protein; InterPro: IPR007926 This family consists of several Borrelia P83/P100 antigen proteins.
Probab=88.99 E-value=19 Score=40.23 Aligned_cols=11 Identities=45% Similarity=0.703 Sum_probs=5.4
Q ss_pred eEEEEEEeCCC
Q 007740 73 RICIIHVHTPA 83 (591)
Q Consensus 73 ~I~llHV~~~~ 83 (591)
++.++|+++|.
T Consensus 50 ~y~ii~~vd~~ 60 (489)
T PF05262_consen 50 RYYIIHAVDPE 60 (489)
T ss_pred cEEEEEecCcc
Confidence 45555555443
No 438
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=88.90 E-value=0.081 Score=57.17 Aligned_cols=61 Identities=20% Similarity=0.225 Sum_probs=49.3
Q ss_pred cCCCcCCccccccceeEEEEEEc--CeEEEEEEccCC---CCCChhHHHHHHHHHHcCCCCCCcccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH---SLQGPSEFQQEVGAYESFIFHFNLVDS 589 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~--g~~VAVK~L~~~---~~~~~~~F~~Ev~il~s~lrHpNLV~l 589 (591)
+.|..-++||+||||.||-+..+ |..+|.|+|... ..++...-.+|-.|| .+++-|-||.|
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL-~kV~s~FiVsl 250 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQIL-EKVSSPFIVSL 250 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHH-HHhccCcEEEE
Confidence 44777889999999999999887 889999999542 334455567888999 99999988865
No 439
>PRK13820 argininosuccinate synthase; Provisional
Probab=88.89 E-value=4.3 Score=44.06 Aligned_cols=90 Identities=12% Similarity=0.199 Sum_probs=58.7
Q ss_pred CEEEEeecCChHHHHHHHHHHHHhcCCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 45 DKIYVAVAKQVKESKSVLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLLI 124 (591)
Q Consensus 45 ~kIlVAVD~S~~~S~~Al~wAl~~~~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~~~ 124 (591)
++|+||+-|- ..|.-++.|+.+.+.-..|+.+|+..... . + -++..+.+
T Consensus 3 ~kVvvA~SGG-vDSsvll~lL~e~~g~~~Viav~vd~g~~------~---------~---------------e~~~a~~~ 51 (394)
T PRK13820 3 KKVVLAYSGG-LDTSVCVPLLKEKYGYDEVITVTVDVGQP------E---------E---------------EIKEAEEK 51 (394)
T ss_pred CeEEEEEeCc-HHHHHHHHHHHHhcCCCEEEEEEEECCCC------h---------H---------------HHHHHHHH
Confidence 5899999999 88999999986643223899999964310 0 0 11223444
Q ss_pred HHHcCCceEEEEEe----------------------------cCChHHHHHHHHHHcCCCEEEEccCCC
Q 007740 125 CRQMGVRAEKLDTE----------------------------SESTEKGILELISHYGIRKLVMGAAAD 165 (591)
Q Consensus 125 c~~~gV~~e~~vie----------------------------~~~~~~~Ive~a~~~~idlIVmGs~g~ 165 (591)
|...||++..+-+. ..-+.+.++++|++++++.|..|+.|+
T Consensus 52 a~~lGi~~~vvd~~eef~~~~i~~~i~~n~~~~gYpl~~~~cR~~i~~~l~e~A~e~G~~~IA~G~t~~ 120 (394)
T PRK13820 52 AKKLGDKHYTIDAKEEFAKDYIFPAIKANALYEGYPLGTALARPLIAEKIVEVAEKEGASAIAHGCTGK 120 (394)
T ss_pred HHHcCCCEEEEeCHHHHHHHHHHHHHHhCccccCCcCcHHHHHHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 55555544332111 012356789999999999999999765
No 440
>PF15290 Syntaphilin: Golgi-localised syntaxin-1-binding clamp
Probab=88.85 E-value=24 Score=36.04 Aligned_cols=69 Identities=20% Similarity=0.135 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 007740 361 QLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMK 429 (591)
Q Consensus 361 ~l~~~~~e~~~~r~e~~~~~~~~~~ae~e~~~a~~~a~~~e~~~~ee~~~rk~~E~~l~~ek~~~~~~k 429 (591)
-|++-+.-++.||-.|++.-.+...-+.|+.+-+-+.-....-|.||+=.|=|.+-+|.+.+.+++++|
T Consensus 62 PLQQKEV~iRHLkakLkes~~~l~dRetEI~eLksQL~RMrEDWIEEECHRVEAQLALKEARkEIkQLk 130 (305)
T PF15290_consen 62 PLQQKEVCIRHLKAKLKESENRLHDRETEIDELKSQLARMREDWIEEECHRVEAQLALKEARKEIKQLK 130 (305)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478888889999999998877776666666665555444444444444444444444444444444444
No 441
>PF04949 Transcrip_act: Transcriptional activator; InterPro: IPR007033 Golgins are a family of coiled-coil proteins associated with the Golgi apparatus necessary for tethering events in membrane fusion and as structural supports for Golgi cisternae []. This entry represents proteins annotated as RAB6-interacting golgins.
Probab=88.43 E-value=21 Score=33.07 Aligned_cols=64 Identities=22% Similarity=0.206 Sum_probs=51.4
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 422 KLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQ 485 (591)
Q Consensus 422 k~~~~~~k~e~~~~~~el~~~~~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~~~~~~~~el~ 485 (591)
+++++-++...+.++.+|.-+..-....+++..++..+..+...........|.++-.+...++
T Consensus 83 RkEv~~vRkkID~vNreLkpl~~~cqKKEkEykealea~nEknkeK~~Lv~~L~eLv~eSE~~r 146 (159)
T PF04949_consen 83 RKEVEMVRKKIDSVNRELKPLGQSCQKKEKEYKEALEAFNEKNKEKAQLVTRLMELVSESERLR 146 (159)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7778888888888888888887777888888888888888888888777777777776666553
No 442
>KOG4360 consensus Uncharacterized coiled coil protein [Function unknown]
Probab=88.34 E-value=26 Score=38.76 Aligned_cols=127 Identities=20% Similarity=0.258 Sum_probs=64.8
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHH---HHHHHHHH--------HHHHHHHHHHHHHHH---HHHHHHHHHHHHH----
Q 007740 352 GSVDDNLYDQLAQAMAEAENSRREAF---EEALRRGK--------AEKDAIESIRRAKAS---ESLYAEELKRRKE---- 413 (591)
Q Consensus 352 ~~~~~~~~~~l~~~~~e~~~~r~e~~---~~~~~~~~--------ae~e~~~a~~~a~~~---e~~~~ee~~~rk~---- 413 (591)
...++.+..+|+....|..++|.++. .|..-+.. ..++.-.+.-++.-. -..+..|..+..|
T Consensus 158 ~~~~EaL~ekLk~~~een~~lr~k~~llk~Et~~~~~keq~~y~~~~KelrdtN~q~~s~~eel~~kt~el~~q~Ee~sk 237 (596)
T KOG4360|consen 158 RELLEALQEKLKPLEEENTQLRSKAMLLKTETLTYEEKEQQLYGDCVKELRDTNTQARSGQEELQSKTKELSRQQEENSK 237 (596)
T ss_pred HHHHHHHHhhcCChHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34466788888888888888887754 22222211 112222221111111 1112222221111
Q ss_pred HHHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 414 FEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYK 478 (591)
Q Consensus 414 ~E~~l~~ek~~~~~~k~e~~~~~~el~~~~~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~~~~ 478 (591)
+...|.-.++++.....++++...=|+..++....+..+..|.+.+.+|+.+-+.++++.|+.++
T Consensus 238 Llsql~d~qkk~k~~~~Ekeel~~~Lq~~~da~~ql~aE~~EleDkyAE~m~~~~EaeeELk~lr 302 (596)
T KOG4360|consen 238 LLSQLVDLQKKIKYLRHEKEELDEHLQAYKDAQRQLTAELEELEDKYAECMQMLHEAEEELKCLR 302 (596)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 12222333444444555666666666666666666777777777666666666666666555443
No 443
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=88.14 E-value=2.8 Score=42.86 Aligned_cols=121 Identities=12% Similarity=0.014 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHhc--C-CCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCce
Q 007740 56 KESKSVLLWALQNS--G-GKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLLICRQMGVRA 132 (591)
Q Consensus 56 ~~S~~Al~wAl~~~--~-g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~~~c~~~gV~~ 132 (591)
+.-.+||+.|+.+- . |.+|++|+|=++.. .....|..+..+-...+|.+
T Consensus 36 ~~D~~AlE~Alrlke~~~g~~Vtvvs~Gp~~a----------------------------~~~~~lr~aLAmGaD~avli 87 (256)
T PRK03359 36 QYDLNAIEAACQLKQQAAEAQVTALSVGGKAL----------------------------TNAKGRKDVLSRGPDELIVV 87 (256)
T ss_pred hhhHHHHHHHHHHhhhcCCCEEEEEEECCcch----------------------------hhHHHHHHHHHcCCCEEEEE
Confidence 66788999999877 2 47999998865421 11234444443322222222
Q ss_pred EEEEEecCC---hHHHHHHHHHHcCCCEEEEccCCCchhhHHhccCCcchHHHHhccCCCccEEE-EEcCCceeeeecC
Q 007740 133 EKLDTESES---TEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIW-FICNGNLIYTREG 207 (591)
Q Consensus 133 e~~vie~~~---~~~~Ive~a~~~~idlIVmGs~g~~~~~R~l~Gs~s~Va~~V~~~Ap~~C~V~-vV~kgk~~~~R~a 207 (591)
..--+.+.| .+..|..++++.++|+|+.|...-.+-...+-.. +|..+=--.-.+|.=+ .+..|.+..+|+.
T Consensus 88 ~d~~~~g~D~~~tA~~La~ai~~~~~DLVl~G~~s~D~~tgqvg~~---lAe~Lg~P~vt~v~~l~~~~~~~v~v~r~~ 163 (256)
T PRK03359 88 IDDQFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLL---VGEILNIPAINGVSKIISLTDDTLTVEREL 163 (256)
T ss_pred ecCcccCcCHHHHHHHHHHHHHHhCCCEEEEcCccccCCCCcHHHH---HHHHhCCCceeeEEEEEEecCCEEEEEEEc
Confidence 211112222 4678889999999999999987644322111111 3333211111122223 2467777888874
No 444
>PRK04778 septation ring formation regulator EzrA; Provisional
Probab=88.10 E-value=32 Score=39.31 Aligned_cols=57 Identities=25% Similarity=0.188 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHHHHHH
Q 007740 389 DAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQ 445 (591)
Q Consensus 389 e~~~a~~~a~~~e~~~~ee~~~rk~~E~~l~~ek~~~~~~k~e~~~~~~el~~~~~~ 445 (591)
..-.-..++..+-.....|...++..+....+....+..++.+...+..++..+.+.
T Consensus 283 ~~~~i~~~Id~Lyd~lekE~~A~~~vek~~~~l~~~l~~~~e~~~~l~~Ei~~l~~s 339 (569)
T PRK04778 283 KNEEIQERIDQLYDILEREVKARKYVEKNSDTLPDFLEHAKEQNKELKEEIDRVKQS 339 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 333344455555566666666666666666555555555555444444444444333
No 445
>cd01990 Alpha_ANH_like_I This is a subfamily of Adenine nucleotide alpha hydrolases superfamily. Adenine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins probably binds ATP. This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N terminus.
Probab=88.08 E-value=3.4 Score=40.17 Aligned_cols=89 Identities=21% Similarity=0.399 Sum_probs=58.2
Q ss_pred EEEeecCChHHHHHHHHHHHHhcCCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 47 IYVAVAKQVKESKSVLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLLICR 126 (591)
Q Consensus 47 IlVAVD~S~~~S~~Al~wAl~~~~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~~~c~ 126 (591)
|+|++-|. ..|-.++.++.+.. +..|+.|||..+.. + ..-++....+|.
T Consensus 1 vvva~SGG-~DS~~ll~ll~~~~-~~~v~~v~vd~g~~---------~--------------------~~~~~~~~~~a~ 49 (202)
T cd01990 1 VAVAFSGG-VDSTLLLKAAVDAL-GDRVLAVTATSPLF---------P--------------------RRELEEAKRLAK 49 (202)
T ss_pred CEEEccCC-HHHHHHHHHHHHHh-CCcEEEEEeCCCCC---------C--------------------HHHHHHHHHHHH
Confidence 68999998 88988888876654 33788999964421 0 012233445677
Q ss_pred HcCCceEEEEEec------------------CChHHHHHHHHHHcCCCEEEEccCCCc
Q 007740 127 QMGVRAEKLDTES------------------ESTEKGILELISHYGIRKLVMGAAADK 166 (591)
Q Consensus 127 ~~gV~~e~~vie~------------------~~~~~~Ive~a~~~~idlIVmGs~g~~ 166 (591)
.-|++...+.+.. .-....+.++|.++|++.|+.|.+...
T Consensus 50 ~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~l~~~a~~~g~~~I~~G~~~dD 107 (202)
T cd01990 50 EIGIRHEVIETDELDDPEFAKNPPDRCYLCKKALYEALKEIAEELGLDVVLDGTNADD 107 (202)
T ss_pred HcCCcEEEEeCCccccHHHhcCCCCccchhHHHHHHHHHHHHHHCCCCEEEEcCcccc
Confidence 7788766544320 012235667899999999999988643
No 446
>PF11932 DUF3450: Protein of unknown function (DUF3450); InterPro: IPR016866 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. However, they are found in an operon along with components of a TonB transport system (typified by Vibrio cholerae TonB2 [], and are predicted to be localized to the periplasmic space. Caution: the low-complexity nature of these sequences produces spurious BLAST hits to chromosome segregation ATPases (which are much longer in length and contain canonical Walker motifs). Accordingly, some members are misidentified as such.
Probab=87.84 E-value=33 Score=34.73 Aligned_cols=22 Identities=18% Similarity=0.389 Sum_probs=15.5
Q ss_pred ccceeEEEEEEc--CeEEEEEEcc
Q 007740 539 GGYGSIYKGLLR--HMQVAIKMLH 560 (591)
Q Consensus 539 G~~G~Vykg~l~--g~~VAVK~L~ 560 (591)
|+-=.+|.|.+. |..+.|..|+
T Consensus 165 g~~i~~~~~~i~~dG~~~~V~~Lr 188 (251)
T PF11932_consen 165 GRTIEVYQGTITLDGEERQVDFLR 188 (251)
T ss_pred CCceeEEEEEEeECCeEEEEEEEe
Confidence 444468999874 7887777764
No 447
>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion []. Located at the C terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). These proteins also contain four coiled-coil domains [].
Probab=87.38 E-value=58 Score=38.57 Aligned_cols=79 Identities=16% Similarity=0.114 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HhHHHHHHHHHhHHH
Q 007740 364 QAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALA---------NGKLELERMKKQHDE 434 (591)
Q Consensus 364 ~~~~e~~~~r~e~~~~~~~~~~ae~e~~~a~~~a~~~e~~~~ee~~~rk~~E~~l~---------~ek~~~~~~k~e~~~ 434 (591)
.+..|..++.-|+..-.+++...+.++.-...++..|+..+.+..++.....++|. .....+++...+++.
T Consensus 368 ~~qeE~~~~~~Ei~~l~d~~d~~e~ki~~Lq~kie~Lee~l~ekd~ql~~~k~Rl~~~~d~~~~~~~~~~lEea~~eker 447 (775)
T PF10174_consen 368 KLQEEKSRLQGEIEDLRDMLDKKERKINVLQKKIENLEEQLREKDRQLDEEKERLSSQADSSNEDEALETLEEALREKER 447 (775)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHH
Confidence 45556666666666666667777777777777888888888888777777777776 223445555555555
Q ss_pred HHHHHHHH
Q 007740 435 VMEELQIA 442 (591)
Q Consensus 435 ~~~el~~~ 442 (591)
+...+.+.
T Consensus 448 ~~e~l~e~ 455 (775)
T PF10174_consen 448 LQERLEEQ 455 (775)
T ss_pred HHHHHHHH
Confidence 55555443
No 448
>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only]
Probab=87.34 E-value=32 Score=37.50 Aligned_cols=119 Identities=12% Similarity=0.133 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHH
Q 007740 356 DNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEV 435 (591)
Q Consensus 356 ~~~~~~l~~~~~e~~~~r~e~~~~~~~~~~ae~e~~~a~~~a~~~e~~~~ee~~~rk~~E~~l~~ek~~~~~~k~e~~~~ 435 (591)
+.-..++.+ .++++.|..+......-...+.+.-.+....+..|+.+++-...-+..+.++..+++.-..+.+.++
T Consensus 338 e~~~~e~~q--sqlen~k~~~e~~~~e~~~l~~~~~~~e~~kk~~e~k~~q~q~k~~k~~kel~~~~E~n~~l~knq~-- 413 (493)
T KOG0804|consen 338 EQIMSEYEQ--SQLENQKQYYELLITEADSLKQESSDLEAEKKIVERKLQQLQTKLKKCQKELKEEREENKKLIKNQD-- 413 (493)
T ss_pred HHHHHHHHH--HHHHhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH--
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 436 MEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKK 479 (591)
Q Consensus 436 ~~el~~~~~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~~~~~ 479 (591)
--...+++..+.+.......+.++.+|++|++...-.+...++
T Consensus 414 -vw~~kl~~~~e~~~~~~~s~d~~I~dLqEQlrDlmf~le~qqk 456 (493)
T KOG0804|consen 414 -VWRGKLKELEEREKEALGSKDEKITDLQEQLRDLMFFLEAQQK 456 (493)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHheehhhhhh
No 449
>PF05262 Borrelia_P83: Borrelia P83/100 protein; InterPro: IPR007926 This family consists of several Borrelia P83/P100 antigen proteins.
Probab=87.24 E-value=46 Score=37.16 Aligned_cols=14 Identities=14% Similarity=0.323 Sum_probs=11.3
Q ss_pred HcCCCEEEEccCCC
Q 007740 152 HYGIRKLVMGAAAD 165 (591)
Q Consensus 152 ~~~idlIVmGs~g~ 165 (591)
..++|.|++|...+
T Consensus 64 ~~~ADi~~ig~~a~ 77 (489)
T PF05262_consen 64 KLDADIFIIGENAR 77 (489)
T ss_pred CCCCcEEEEcCCCC
Confidence 46899999998654
No 450
>COG1842 PspA Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms]
Probab=86.85 E-value=36 Score=34.09 Aligned_cols=45 Identities=20% Similarity=0.209 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 357 NLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASE 401 (591)
Q Consensus 357 ~~~~~l~~~~~e~~~~r~e~~~~~~~~~~ae~e~~~a~~~a~~~e 401 (591)
.+..-+.++..++..+|+.+-+-+......++++-.+...+..++
T Consensus 28 ~l~Q~ird~~~~l~~ar~~~A~~~a~~k~~e~~~~~~~~~~~k~e 72 (225)
T COG1842 28 MLEQAIRDMESELAKARQALAQAIARQKQLERKLEEAQARAEKLE 72 (225)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555566666666666666666656666666665555554443
No 451
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=86.74 E-value=0.97 Score=44.82 Aligned_cols=57 Identities=28% Similarity=0.401 Sum_probs=45.5
Q ss_pred cCCccccccceeEEEEEEcCeEEEEEEccCCCCC---ChhHHHHHHHHHHcCCCCC-Cccccc
Q 007740 532 PSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQ---GPSEFQQEVGAYESFIFHF-NLVDSF 590 (591)
Q Consensus 532 ~~~~iG~G~~G~Vykg~l~g~~VAVK~L~~~~~~---~~~~F~~Ev~il~s~lrHp-NLV~li 590 (591)
....||.|+||.||++... ..+++|.+...... ....|.+|+.++ ..+.|+ |++.++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~~i~~~~ 64 (384)
T COG0515 4 ILRKLGEGSFGEVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQIL-ASLNHPPNIVKLY 64 (384)
T ss_pred eEEeecCCCCeEEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHH-HHccCCcceeeEE
Confidence 3457899999999999888 78899999654332 367799999999 999988 687653
No 452
>PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells. In yeast, 15 Apg proteins coordinate the formation of autophagosomes. No molecule involved in autophagy has yet been identified in higher eukaryotes []. The pre-autophagosomal structure contains at least five Apg proteins: Apg1p, Apg2p, Apg5p, Aut7p/Apg8p and Apg16p. It is found in the vacuole []. The C-terminal glycine of Apg12p is conjugated to a lysine residue of Apg5p via an isopeptide bond. During autophagy, cytoplasmic components are enclosed in autophagosomes and delivered to lysosomes/vacuoles. Auotphagy protein 16 (Apg16) has been shown to be bind to Apg5 and is required for the function of the Apg12p-Apg5p conjugate []. Autophagy protein 5 (Apg5) is directly required for the import of aminopeptidase I via the cytoplasm-to-vacuole targeting pathway []. Apg6/Vps30p has two distinct functions in the autophagic process, either associated with the membrane or in a retrieval step of the carboxypeptidase Y sorting pathway [].; GO: 0006914 autophagy; PDB: 3Q8T_A 3VP7_A 4DDP_A.
Probab=86.71 E-value=14 Score=38.88 Aligned_cols=72 Identities=26% Similarity=0.389 Sum_probs=36.3
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007740 423 LELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKS 501 (591)
Q Consensus 423 ~~~~~~k~e~~~~~~el~~~~~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~~~~~~~~el~~~r~~~~~e~~~~~~~ 501 (591)
++++.+..+.+++..++..++.+...+..+..+.-.....++-+ +.++..+++.+..+.+....+.+.+++.
T Consensus 64 ~eL~~LE~e~~~l~~el~~le~e~~~l~~eE~~~~~~~n~~~~~-------l~~~~~e~~sl~~q~~~~~~~L~~L~kt 135 (314)
T PF04111_consen 64 QELEELEKEREELDQELEELEEELEELDEEEEEYWREYNELQLE-------LIEFQEERDSLKNQYEYASNQLDRLRKT 135 (314)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHCHHT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34455555555555555555555544444443433333333333 3444455555555556666666666553
No 453
>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins.
Probab=86.56 E-value=79 Score=39.66 Aligned_cols=13 Identities=31% Similarity=0.376 Sum_probs=5.9
Q ss_pred hHHHHHHHHHHHH
Q 007740 357 NLYDQLAQAMAEA 369 (591)
Q Consensus 357 ~~~~~l~~~~~e~ 369 (591)
.+-.+++.+...+
T Consensus 604 ~L~~~l~~~~~~l 616 (1201)
T PF12128_consen 604 ELRERLEQAEDQL 616 (1201)
T ss_pred HHHHHHHHHHHHH
Confidence 4555444444333
No 454
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=86.35 E-value=0.18 Score=53.76 Aligned_cols=62 Identities=27% Similarity=0.313 Sum_probs=45.9
Q ss_pred hcCCCcCCccccccceeEEEEEEcC-------eEEEEEEccCC-CCCChhHHHHHHHHHHcCCCCCCcccc
Q 007740 527 THNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPH-SLQGPSEFQQEVGAYESFIFHFNLVDS 589 (591)
Q Consensus 527 T~~F~~~~~iG~G~~G~Vykg~l~g-------~~VAVK~L~~~-~~~~~~~F~~Ev~il~s~lrHpNLV~l 589 (591)
.+.|.....+-+|.||.||.|.|+. ..|-+|.+... +.-....|.+|...+ -.+.||||..+
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~ll-y~~sH~nll~V 352 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLL-YGASHPNLLSV 352 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHH-hcCcCCCccce
Confidence 3445556678999999999998861 34667777443 333456789999888 88999999865
No 455
>PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function.
Probab=86.19 E-value=70 Score=36.78 Aligned_cols=42 Identities=12% Similarity=0.142 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHcCCc----eEEEEEec-CChHHHHHHHHHHcCCCEE
Q 007740 117 HLDMCLLICRQMGVR----AEKLDTES-ESTEKGILELISHYGIRKL 158 (591)
Q Consensus 117 lL~~~~~~c~~~gV~----~e~~vie~-~~~~~~Ive~a~~~~idlI 158 (591)
+-..+...|...|+. +.++..-. .++...++-++++..-+..
T Consensus 67 ~~~~lA~~~k~lGy~~digyq~fLYp~e~~~R~ll~fLiekLP~~~~ 113 (594)
T PF05667_consen 67 VGTSLAQACKELGYRGDIGYQTFLYPNEKDLRRLLMFLIEKLPRENT 113 (594)
T ss_pred HHHHHHHHHHHcCCCCCCcchhhccCChHHHHHHHHHHHHHCCcccc
Confidence 444556678877764 33333322 4677778888998888744
No 456
>KOG2891 consensus Surface glycoprotein [General function prediction only]
Probab=86.17 E-value=42 Score=34.22 Aligned_cols=23 Identities=35% Similarity=0.404 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 007740 395 RRAKASESLYAEELKRRKEFEEA 417 (591)
Q Consensus 395 ~~a~~~e~~~~ee~~~rk~~E~~ 417 (591)
|+.++||+.-.++.++.++.|++
T Consensus 331 qekqeleqmaeeekkr~eeaeer 353 (445)
T KOG2891|consen 331 QEKQELEQMAEEEKKREEEAEER 353 (445)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 34445555555554444444443
No 457
>PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function. Several sequences in this family are described as being myosin heavy chain-like.
Probab=85.85 E-value=68 Score=36.30 Aligned_cols=44 Identities=11% Similarity=0.079 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 359 YDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASES 402 (591)
Q Consensus 359 ~~~l~~~~~e~~~~r~e~~~~~~~~~~ae~e~~~a~~~a~~~e~ 402 (591)
-.+|..+..++.++++++..--.-+.++-.++-.+++.+.+|..
T Consensus 33 e~eL~~~qeel~~~k~~l~~~E~~k~~~l~ELe~akr~veel~~ 76 (522)
T PF05701_consen 33 ETELEKAQEELAKLKEQLEAAEREKAQALSELESAKRTVEELKL 76 (522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666666666655554333344455555555555555443
No 458
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=85.85 E-value=1 Score=46.05 Aligned_cols=54 Identities=15% Similarity=0.220 Sum_probs=42.7
Q ss_pred ccccccceeEEEEEEc--CeEEEEEEccC-CCCCChhHHHHHHHHHHcCCC-CCCcccc
Q 007740 535 KIGEGGYGSIYKGLLR--HMQVAIKMLHP-HSLQGPSEFQQEVGAYESFIF-HFNLVDS 589 (591)
Q Consensus 535 ~iG~G~~G~Vykg~l~--g~~VAVK~L~~-~~~~~~~~F~~Ev~il~s~lr-HpNLV~l 589 (591)
.||.|..|.|++..++ |...|||.+.. .+....+.....+.++ .+.+ .|.||+.
T Consensus 99 dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv-~~s~dcpyIV~c 156 (391)
T KOG0983|consen 99 DLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVV-LKSHDCPYIVQC 156 (391)
T ss_pred hhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHH-hhccCCCeeeee
Confidence 5899999999999998 69999999955 3444456677888888 6655 6888864
No 459
>COG2433 Uncharacterized conserved protein [Function unknown]
Probab=85.74 E-value=34 Score=38.76 Aligned_cols=17 Identities=18% Similarity=0.364 Sum_probs=11.5
Q ss_pred CcccccCHHHHHHhhcC
Q 007740 513 QFFSDFSFSEIEGATHN 529 (591)
Q Consensus 513 ~~~~~~s~~el~~aT~~ 529 (591)
..+..|+.+.|..+-..
T Consensus 523 k~ve~~t~~~Ie~~e~~ 539 (652)
T COG2433 523 KVVEKLTLEAIEEAEEE 539 (652)
T ss_pred ehhhhhhHHHHHhHHHh
Confidence 34677888888766543
No 460
>PRK10884 SH3 domain-containing protein; Provisional
Probab=85.71 E-value=15 Score=36.32 Aligned_cols=28 Identities=14% Similarity=0.264 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 456 SDQTAKELEQKIISAVELLQNYKKEQDE 483 (591)
Q Consensus 456 ~~~~~~ele~~~~~~~~~l~~~~~~~~e 483 (591)
+..+.++|.+++..++..+..+..+.+.
T Consensus 137 L~~~n~~L~~~l~~~~~~~~~l~~~~~~ 164 (206)
T PRK10884 137 LKEENQKLKNQLIVAQKKVDAANLQLDD 164 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334444444444444444444333
No 461
>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms]
Probab=85.62 E-value=55 Score=38.27 Aligned_cols=61 Identities=7% Similarity=0.078 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHH
Q 007740 386 AEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQK 446 (591)
Q Consensus 386 ae~e~~~a~~~a~~~e~~~~ee~~~rk~~E~~l~~ek~~~~~~k~e~~~~~~el~~~~~~~ 446 (591)
.|.+..+-+.+...|++.+.+-..+...+++.++....++.+.+.+.+....++..+.+.+
T Consensus 97 lEddlk~~~sQiriLQn~c~~lE~ekq~lQ~ti~~~q~d~ke~etelE~~~srlh~le~eL 157 (1265)
T KOG0976|consen 97 LEDDLKHHESQIRILQNKCLRLEMEKQKLQDTIQGAQDDKKENEIEIENLNSRLHKLEDEL 157 (1265)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3455555566666666666665555555666665555555555555555555555554443
No 462
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=85.53 E-value=1.4 Score=48.67 Aligned_cols=45 Identities=16% Similarity=0.315 Sum_probs=34.0
Q ss_pred CCCcCCccccccceeEEEEEEc-CeEEEEEEccCCCCCChhHHHHHHHHH
Q 007740 529 NFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEVGAY 577 (591)
Q Consensus 529 ~F~~~~~iG~G~~G~Vykg~l~-g~~VAVK~L~~~~~~~~~~F~~Ev~il 577 (591)
.|++ ..||.|++|.||+|.+. |..||||+.++.. ...|..++.+|
T Consensus 119 ~fd~-~plasaSigQVh~A~l~~G~~VaVKv~rp~i---~~~i~~Dl~~l 164 (437)
T TIGR01982 119 EFEE-KPLAAASIAQVHRARLVDGKEVAVKVLRPGI---EKTIAADIALL 164 (437)
T ss_pred hCCC-cceeeeehhheEEEEecCCCEEEEEeeCCCc---HHHHHHHHHHH
Confidence 3543 57999999999999997 9999999997754 23455555444
No 463
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=85.38 E-value=67 Score=39.40 Aligned_cols=71 Identities=24% Similarity=0.244 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHH
Q 007740 365 AMAEAENSRREAFEEALRRGKAEK-----DAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEV 435 (591)
Q Consensus 365 ~~~e~~~~r~e~~~~~~~~~~ae~-----e~~~a~~~a~~~e~~~~ee~~~rk~~E~~l~~ek~~~~~~k~e~~~~ 435 (591)
+..+++..-+++.++..+...-+. +...+....++.+....++..+++.++..+...+++++..++..+.+
T Consensus 459 ~~~~~~~~~keL~e~i~~lk~~~~el~~~q~~l~q~~~ke~~ek~~~~~~~~~~l~~~~~~~~eele~~q~~~~~~ 534 (1317)
T KOG0612|consen 459 AVAELEEMDKELEETIEKLKSEESELQREQKALLQHEQKEVEEKLSEEEAKKRKLEALVRQLEEELEDAQKKNDNA 534 (1317)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444555544444422222 33335556666666666666666677777777666676665554444
No 464
>PHA02562 46 endonuclease subunit; Provisional
Probab=85.38 E-value=71 Score=36.10 Aligned_cols=49 Identities=18% Similarity=0.209 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 439 LQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQME 487 (591)
Q Consensus 439 l~~~~~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~~~~~~~~el~~~ 487 (591)
+..+.++...++.++.++.....+++.++......+.++..+..++.++
T Consensus 353 i~~~~~~~~~l~~ei~~l~~~~~~~~~~l~~l~~~l~~~~~~~~~~~ke 401 (562)
T PHA02562 353 LITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSELVKE 401 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334444444444444444455555555555555555555554443
No 465
>PRK00409 recombination and DNA strand exchange inhibitor protein; Reviewed
Probab=85.32 E-value=22 Score=42.20 Aligned_cols=18 Identities=0% Similarity=-0.265 Sum_probs=7.8
Q ss_pred HHHHHHHHHHcCCCEEEE
Q 007740 143 EKGILELISHYGIRKLVM 160 (591)
Q Consensus 143 ~~~Ive~a~~~~idlIVm 160 (591)
.-+...++..+++..-.+
T Consensus 278 l~a~a~~a~~~~~~~P~~ 295 (782)
T PRK00409 278 IFARARYAKALKATFPLF 295 (782)
T ss_pred HHHHHHHHHHCCCccceE
Confidence 334444444444433333
No 466
>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton]
Probab=85.23 E-value=48 Score=38.53 Aligned_cols=24 Identities=8% Similarity=0.122 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHcCCceEEEEEec
Q 007740 116 NHLDMCLLICRQMGVRAEKLDTES 139 (591)
Q Consensus 116 ~lL~~~~~~c~~~gV~~e~~vie~ 139 (591)
.+|..-.++-...|..+..+...+
T Consensus 488 rILkeEQElYekEGLnv~ei~f~D 511 (1259)
T KOG0163|consen 488 RILKEEQELYEKEGLNVPEIEFTD 511 (1259)
T ss_pred HHHHHHHHHHHhcCCCCCceEecc
Confidence 345555566667787776655443
No 467
>KOG2751 consensus Beclin-like protein [Signal transduction mechanisms]
Probab=84.87 E-value=35 Score=37.05 Aligned_cols=53 Identities=15% Similarity=0.199 Sum_probs=23.6
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 425 LERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNY 477 (591)
Q Consensus 425 ~~~~k~e~~~~~~el~~~~~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~~~ 477 (591)
+++++++.+.+...+++++..+.++..+..+.-+.......+...-+..++++
T Consensus 199 lk~le~~~~~l~~~l~e~~~~~~~~~e~~~~~~~ey~~~~~q~~~~~del~Sl 251 (447)
T KOG2751|consen 199 LEELEKEEAELDHQLKELEFKAERLNEEEDQYWREYNNFQRQLIEHQDELDSL 251 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHH
Confidence 33333444444455555555555555544444444444444443333333333
No 468
>PRK12274 serine/threonine protein kinase; Provisional
Probab=84.73 E-value=1.3 Score=43.94 Aligned_cols=60 Identities=8% Similarity=-0.130 Sum_probs=41.5
Q ss_pred CCcCCccccccceeEEEEEEcCeEEEEEEccCCCC--C--ChhHHHHHHHHHHcCCCC-CCccccc
Q 007740 530 FDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSL--Q--GPSEFQQEVGAYESFIFH-FNLVDSF 590 (591)
Q Consensus 530 F~~~~~iG~G~~G~Vykg~l~g~~VAVK~L~~~~~--~--~~~~F~~Ev~il~s~lrH-pNLV~li 590 (591)
+.....|+.|+||+||...-.+..++.+.+..... . ....|.+|+.+| .++.| ++++.++
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL-~~L~~~~~vP~ll 68 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALAL-RQLDGLPRTPRLL 68 (218)
T ss_pred cccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHH-HhcCCCCCCCEEE
Confidence 34456899999999995444578888887754322 1 112588999999 99954 6666653
No 469
>PF11180 DUF2968: Protein of unknown function (DUF2968); InterPro: IPR021350 This family of proteins has no known function.
Probab=84.62 E-value=30 Score=33.52 Aligned_cols=83 Identities=17% Similarity=0.246 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHHHHH
Q 007740 365 AMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALD 444 (591)
Q Consensus 365 ~~~e~~~~r~e~~~~~~~~~~ae~e~~~a~~~a~~~e~~~~ee~~~rk~~E~~l~~ek~~~~~~k~e~~~~~~el~~~~~ 444 (591)
+..|+++.++|+... .++..+.+-..+-..+...|...+++-.+..........+.+.+..
T Consensus 101 A~~eirR~~LeAQka-------------------~~eR~ia~~~~ra~~LqaDl~~~~~Q~~~va~~Q~q~r~ea~aL~~ 161 (192)
T PF11180_consen 101 ADVEIRRAQLEAQKA-------------------QLERLIAESEARANRLQADLQIARQQQQQVAARQQQARQEAQALEA 161 (192)
T ss_pred HHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 007740 445 QKSLLESQIAESDQTAKELEQK 466 (591)
Q Consensus 445 ~~~~l~~~~~e~~~~~~ele~~ 466 (591)
++..+..++..+++++..|+.+
T Consensus 162 e~~aaqaQL~~lQ~qv~~Lq~q 183 (192)
T PF11180_consen 162 ERRAAQAQLRQLQRQVRQLQRQ 183 (192)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
No 470
>COG2433 Uncharacterized conserved protein [Function unknown]
Probab=84.34 E-value=30 Score=39.15 Aligned_cols=34 Identities=18% Similarity=0.353 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 452 QIAESDQTAKELEQKIISAVELLQNYKKEQDELQ 485 (591)
Q Consensus 452 ~~~e~~~~~~ele~~~~~~~~~l~~~~~~~~el~ 485 (591)
++...+..+..|+.++........++++++.++.
T Consensus 475 ei~~~~~~I~~L~~~L~e~~~~ve~L~~~l~~l~ 508 (652)
T COG2433 475 EIRARDRRIERLEKELEEKKKRVEELERKLAELR 508 (652)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444455555555544444444444444443
No 471
>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins.
Probab=84.27 E-value=1.2e+02 Score=37.96 Aligned_cols=11 Identities=36% Similarity=0.284 Sum_probs=4.2
Q ss_pred HHHHHHHHHHH
Q 007740 359 YDQLAQAMAEA 369 (591)
Q Consensus 359 ~~~l~~~~~e~ 369 (591)
...+.++..+.
T Consensus 613 ~~~l~~~~~~~ 623 (1201)
T PF12128_consen 613 EDQLQSAEERQ 623 (1201)
T ss_pred HHHHHHHHHHH
Confidence 33344333333
No 472
>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]
Probab=84.25 E-value=50 Score=33.38 Aligned_cols=49 Identities=20% Similarity=0.356 Sum_probs=27.2
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 423 LELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAV 471 (591)
Q Consensus 423 ~~~~~~k~e~~~~~~el~~~~~~~~~l~~~~~e~~~~~~ele~~~~~~~ 471 (591)
.++...+++...+..++..++.....++.++.....++..++..+..+.
T Consensus 96 ~E~~~ak~r~~~le~el~~l~~~~~~l~~~i~~l~~~~~~~e~~~~e~~ 144 (239)
T COG1579 96 IEIQIAKERINSLEDELAELMEEIEKLEKEIEDLKERLERLEKNLAEAE 144 (239)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445555555566666666666666666555555555555554444
No 473
>TIGR00606 rad50 rad50. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=84.14 E-value=1e+02 Score=39.11 Aligned_cols=19 Identities=5% Similarity=0.081 Sum_probs=8.7
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 007740 357 NLYDQLAQAMAEAENSRRE 375 (591)
Q Consensus 357 ~~~~~l~~~~~e~~~~r~e 375 (591)
.+...+.....+++.++.+
T Consensus 826 ele~ei~~~~~el~~l~~~ 844 (1311)
T TIGR00606 826 QVNQEKQEKQHELDTVVSK 844 (1311)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444333
No 474
>PF08826 DMPK_coil: DMPK coiled coil domain like; InterPro: IPR014930 This domain is found in the myotonic dystrophy protein kinase (DMPK) and adopts a coiled coil structure. It plays a role in dimerisation []. ; GO: 0004674 protein serine/threonine kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 1WT6_D.
Probab=84.13 E-value=19 Score=28.45 Aligned_cols=23 Identities=35% Similarity=0.536 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 007740 446 KSLLESQIAESDQTAKELEQKII 468 (591)
Q Consensus 446 ~~~l~~~~~e~~~~~~ele~~~~ 468 (591)
....+.+++++..+..+|++++.
T Consensus 27 n~~~e~kLqeaE~rn~eL~~ei~ 49 (61)
T PF08826_consen 27 NLAFESKLQEAEKRNRELEQEIE 49 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445555555555554443
No 475
>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton]
Probab=84.11 E-value=86 Score=36.59 Aligned_cols=24 Identities=17% Similarity=0.166 Sum_probs=12.8
Q ss_pred CCCEEEEeecCC-hHHHHHHHHHHH
Q 007740 43 IEDKIYVAVAKQ-VKESKSVLLWAL 66 (591)
Q Consensus 43 ~~~kIlVAVD~S-~~~S~~Al~wAl 66 (591)
-+--|-||.--- .-+++.||..|+
T Consensus 404 kGTvIrVPLK~~eA~n~RDALaKai 428 (1259)
T KOG0163|consen 404 KGTVIRVPLKIHEASNARDALAKAI 428 (1259)
T ss_pred cceEEEeeccHHhhcchHHHHHHHH
Confidence 345677777532 014556665554
No 476
>KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown]
Probab=84.11 E-value=30 Score=41.27 Aligned_cols=138 Identities=20% Similarity=0.128 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHH
Q 007740 357 NLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVM 436 (591)
Q Consensus 357 ~~~~~l~~~~~e~~~~r~e~~~~~~~~~~ae~e~~~a~~~a~~~e~~~~ee~~~rk~~E~~l~~ek~~~~~~k~e~~~~~ 436 (591)
.+...|++.++|+.+||+|..+-..--..|-...-+...-....+.|- ..-++.--.+..-|..+++++++...+.
T Consensus 202 ~lr~eLddleae~~klrqe~~e~l~ea~ra~~yrdeldalre~aer~d----~~ykerlmDs~fykdRveelkedN~vLl 277 (1195)
T KOG4643|consen 202 RLRNELDDLEAEISKLRQEIEEFLDEAHRADRYRDELDALREQAERPD----TTYKERLMDSDFYKDRVEELKEDNRVLL 277 (1195)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhcCC----CccchhhhhhHHHHHHHHHHHhhhHHHH
Q ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 437 EELQIALDQKSLLESQI--AESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEEL 498 (591)
Q Consensus 437 ~el~~~~~~~~~l~~~~--~e~~~~~~ele~~~~~~~~~l~~~~~~~~el~~~r~~~~~e~~~~ 498 (591)
++-+++++|+..++.+- ......+-.+.+++.-........+.+..+|..+-....-+.+.+
T Consensus 278 eekeMLeeQLq~lrarse~~tleseiiqlkqkl~dm~~erdtdr~kteeL~eEnstLq~q~eqL 341 (1195)
T KOG4643|consen 278 EEKEMLEEQLQKLRARSEGATLESEIIQLKQKLDDMRSERDTDRHKTEELHEENSTLQVQKEQL 341 (1195)
T ss_pred HHHHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHh
No 477
>PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ]. There are several leucine-rich repeats along the sequence of LEK1 that are considered to be zippers, though they do not appear to be binding DNA directly in this instance []. ; GO: 0008134 transcription factor binding, 0042803 protein homodimerization activity, 0045502 dynein binding
Probab=84.05 E-value=36 Score=31.54 Aligned_cols=59 Identities=25% Similarity=0.321 Sum_probs=36.3
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 422 KLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKE 480 (591)
Q Consensus 422 k~~~~~~k~e~~~~~~el~~~~~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~~~~~~ 480 (591)
+.+++.+..++..+..+|..+...+..+.+.+++.+.++.+|+.-.......|+...++
T Consensus 58 ~~el~~lt~el~~L~~EL~~l~sEk~~L~k~lq~~q~kv~eLE~~~~~~~~~l~~~E~e 116 (140)
T PF10473_consen 58 EEELEELTSELNQLELELDTLRSEKENLDKELQKKQEKVSELESLNSSLENLLQEKEQE 116 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 44455555555556666666666666666777777777777766666665555554444
No 478
>COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning]
Probab=83.66 E-value=75 Score=34.97 Aligned_cols=31 Identities=6% Similarity=-0.091 Sum_probs=19.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 357 NLYDQLAQAMAEAENSRREAFEEALRRGKAE 387 (591)
Q Consensus 357 ~~~~~l~~~~~e~~~~r~e~~~~~~~~~~ae 387 (591)
.+....+.+-.++++++-+...-..++++|+
T Consensus 261 ~f~~~~~~i~~~i~~lk~~n~~l~e~i~ea~ 291 (622)
T COG5185 261 GFEKFVHIINTDIANLKTQNDNLYEKIQEAM 291 (622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556677888888876665555555554
No 479
>PF04012 PspA_IM30: PspA/IM30 family; InterPro: IPR007157 This family includes PspA a protein that suppresses sigma54-dependent transcription. The PspA protein, a negative regulator of the Escherichia coli phage shock psp operon, is produced when virulence factors are exported through secretins in many Gram-negative pathogenic bacteria and its homologue in plants, VIPP1, plays a critical role in thylakoid biogenesis, essential for photosynthesis. Activation of transcription by the enhancer-dependent bacterial sigma54-containing RNA polymerase occurs through ATP hydrolysis-driven protein conformational changes enabled by activator proteins that belong to the large AAA(+) mechanochemical protein family. It has been shown that PspA directly and specifically acts upon and binds to the AAA(+) domain of the PspF transcription activator [].
Probab=83.46 E-value=49 Score=32.68 Aligned_cols=44 Identities=11% Similarity=0.071 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 357 NLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKAS 400 (591)
Q Consensus 357 ~~~~~l~~~~~e~~~~r~e~~~~~~~~~~ae~e~~~a~~~a~~~ 400 (591)
.+...+.++...+..++..+-.-+......+++...+...+..+
T Consensus 27 ~l~q~ird~e~~l~~a~~~~a~~~a~~~~le~~~~~~~~~~~~~ 70 (221)
T PF04012_consen 27 MLEQAIRDMEEQLRKARQALARVMANQKRLERKLDEAEEEAEKW 70 (221)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555555666555555555556666655555555444
No 480
>PF11559 ADIP: Afadin- and alpha -actinin-Binding; InterPro: IPR021622 This family is found in mammals where it is localised at cell-cell adherens junctions [], and in Sch. pombe and other fungi where it anchors spindle-pole bodies to spindle microtubules []. It is a coiled-coil structure, and in pombe, it is required for anchoring the minus end of spindle microtubules to the centrosome equivalent, the spindle-pole body. The name ADIP derives from the family being composed of Afadin- and alpha -Actinin-Binding Proteins Localised at Cell-Cell Adherens Junctions.
Probab=83.24 E-value=39 Score=31.35 Aligned_cols=22 Identities=14% Similarity=0.287 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 007740 446 KSLLESQIAESDQTAKELEQKI 467 (591)
Q Consensus 446 ~~~l~~~~~e~~~~~~ele~~~ 467 (591)
...+..++......++...+++
T Consensus 96 ~~~l~~~~~~~~~~~k~~kee~ 117 (151)
T PF11559_consen 96 ERQLQKQLKSLEAKLKQEKEEL 117 (151)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333333
No 481
>KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]
Probab=83.04 E-value=1.2e+02 Score=36.70 Aligned_cols=15 Identities=13% Similarity=0.248 Sum_probs=6.9
Q ss_pred HhccCCcchHHHHhc
Q 007740 171 KMMDLKSKKAISVRQ 185 (591)
Q Consensus 171 ~l~Gs~s~Va~~V~~ 185 (591)
.++|..-+|-.||=+
T Consensus 71 k~lGRak~VgeyIK~ 85 (1072)
T KOG0979|consen 71 KLLGRAKKVGEYIKR 85 (1072)
T ss_pred hhccchhHHHHHHhc
Confidence 455543345555533
No 482
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=83.01 E-value=0.33 Score=49.42 Aligned_cols=68 Identities=19% Similarity=0.351 Sum_probs=50.6
Q ss_pred ccccCHHHHHHhhcCCCcCCccccccceeEEEEEEcCeEEEEEEccC--CCCCChhHHHHHHHHHHcCCCCCCccccc
Q 007740 515 FSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHP--HSLQGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 515 ~~~~s~~el~~aT~~F~~~~~iG~G~~G~Vykg~l~g~~VAVK~L~~--~~~~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
+.-+++.+|...| +|.+.-.|..|+|.+.|.-+.+|+|.. ....-..+|..|...| .-..||||+.++
T Consensus 184 ~~gid~~~lnl~t-------kl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~l-rifshpnilpvl 253 (448)
T KOG0195|consen 184 YTGIDVSSLNLIT-------KLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPAL-RIFSHPNILPVL 253 (448)
T ss_pred ccCcchhhhhhhh-------hhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcce-eeecCCchhhhh
Confidence 4445566665544 577888899999999998888888854 2333356799999888 878999998764
No 483
>PF12072 DUF3552: Domain of unknown function (DUF3552); InterPro: IPR022711 This presumed domain is functionally uncharacterised. This domain is found in bacteria, archaea and eukaryotes. This domain is about 200 amino acids in length. This domain is found associated with PF00013 from PFAM, PF01966 from PFAM. This domain has a single completely conserved residue A that may be functionally important. ; GO: 0008663 2',3'-cyclic-nucleotide 2'-phosphodiesterase activity
Probab=82.98 E-value=49 Score=32.39 Aligned_cols=10 Identities=40% Similarity=0.391 Sum_probs=4.1
Q ss_pred HHHHHHHHHH
Q 007740 364 QAMAEAENSR 373 (591)
Q Consensus 364 ~~~~e~~~~r 373 (591)
+|..|++..+
T Consensus 42 ~A~~eAe~~~ 51 (201)
T PF12072_consen 42 EAEREAEAIK 51 (201)
T ss_pred HHHHHHHHHH
Confidence 3444444433
No 484
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=82.95 E-value=0.43 Score=52.96 Aligned_cols=57 Identities=19% Similarity=0.272 Sum_probs=45.9
Q ss_pred CCccccccceeEEEEEEc-CeEEEEEEccC--CCCCChhHHHHHHHHHHcCC-CCCCccccc
Q 007740 533 SLKIGEGGYGSIYKGLLR-HMQVAIKMLHP--HSLQGPSEFQQEVGAYESFI-FHFNLVDSF 590 (591)
Q Consensus 533 ~~~iG~G~~G~Vykg~l~-g~~VAVK~L~~--~~~~~~~~F~~Ev~il~s~l-rHpNLV~li 590 (591)
...||.||...||+.... .+.+|+|+... ...+....|.+|+..| .++ .|.+||+||
T Consensus 366 lk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL-~KLkg~~~IIqL~ 426 (677)
T KOG0596|consen 366 LKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALL-NKLKGHDKIIQLY 426 (677)
T ss_pred HHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHH-HHhcCCceEEEEe
Confidence 457999999999999887 47788887733 3445578899999999 888 688999876
No 485
>KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]
Probab=82.90 E-value=1.1e+02 Score=36.41 Aligned_cols=24 Identities=17% Similarity=0.196 Sum_probs=17.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHH
Q 007740 354 VDDNLYDQLAQAMAEAENSRREAF 377 (591)
Q Consensus 354 ~~~~~~~~l~~~~~e~~~~r~e~~ 377 (591)
.+.++.-++.+...+++-+|..-.
T Consensus 225 te~eLr~QvrdLtEkLetlR~kR~ 248 (1243)
T KOG0971|consen 225 TEEELRAQVRDLTEKLETLRLKRA 248 (1243)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhh
Confidence 344688888888888887775443
No 486
>PF12072 DUF3552: Domain of unknown function (DUF3552); InterPro: IPR022711 This presumed domain is functionally uncharacterised. This domain is found in bacteria, archaea and eukaryotes. This domain is about 200 amino acids in length. This domain is found associated with PF00013 from PFAM, PF01966 from PFAM. This domain has a single completely conserved residue A that may be functionally important. ; GO: 0008663 2',3'-cyclic-nucleotide 2'-phosphodiesterase activity
Probab=82.65 E-value=51 Score=32.30 Aligned_cols=22 Identities=41% Similarity=0.255 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 007740 358 LYDQLAQAMAEAENSRREAFEE 379 (591)
Q Consensus 358 ~~~~l~~~~~e~~~~r~e~~~~ 379 (591)
...++..+..+++....++..+
T Consensus 25 ~~~~~~~A~~~A~~i~~~A~~e 46 (201)
T PF12072_consen 25 NRKKLEQAEKEAEQILEEAERE 46 (201)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3445667777777776666544
No 487
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=82.53 E-value=0.69 Score=49.59 Aligned_cols=59 Identities=27% Similarity=0.341 Sum_probs=44.3
Q ss_pred cCCCcCCccccccceeEEEEEEc-----CeEEEEEEccCCCCCChhHHHHHHHHHHcCC-CCCCcccc
Q 007740 528 HNFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQGPSEFQQEVGAYESFI-FHFNLVDS 589 (591)
Q Consensus 528 ~~F~~~~~iG~G~~G~Vykg~l~-----g~~VAVK~L~~~~~~~~~~F~~Ev~il~s~l-rHpNLV~l 589 (591)
+.|...++||+|.|+.||++++. ...||+|.+...+ ......+|++.| ..+ -|.|++++
T Consensus 36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L-~~~gG~~ni~~~ 100 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEML-YRLGGSDNIIKL 100 (418)
T ss_pred hhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHH-HHhccchhhhcc
Confidence 44667789999999999999875 3689999986533 344678898888 666 45666654
No 488
>KOG2751 consensus Beclin-like protein [Signal transduction mechanisms]
Probab=82.22 E-value=32 Score=37.38 Aligned_cols=20 Identities=30% Similarity=0.657 Sum_probs=8.7
Q ss_pred HhhcCCCcCCccc-cccceeE
Q 007740 525 GATHNFDPSLKIG-EGGYGSI 544 (591)
Q Consensus 525 ~aT~~F~~~~~iG-~G~~G~V 544 (591)
..|+.|.-...|. .|-||++
T Consensus 266 ~ktNv~n~~F~I~~~G~fgtI 286 (447)
T KOG2751|consen 266 RKTNVFNATFHIWHDGEFGTI 286 (447)
T ss_pred HhhhhhhheeeEeeccccccc
Confidence 4445554444443 2335544
No 489
>PTZ00121 MAEBL; Provisional
Probab=82.15 E-value=1.4e+02 Score=37.55 Aligned_cols=143 Identities=23% Similarity=0.269 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007740 358 LYDQLAQAMAEAENSRREAF----------------EEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANG 421 (591)
Q Consensus 358 ~~~~l~~~~~e~~~~r~e~~----------------~~~~~~~~ae~e~~~a~~~a~~~e~~~~ee~~~rk~~E~~l~~e 421 (591)
+|..-+...+|..+...|+. +++.+.+.-++..+++.+++.+-.....+|.++..+.+.+-+.+
T Consensus 1600 ~~~~~~~~kae~~kk~ee~~kk~E~~kk~eeekKk~Eelkk~eeE~kkk~Ea~kK~EEE~kkraeEeaKk~EEekKKaEe 1679 (2084)
T PTZ00121 1600 LYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEE 1679 (2084)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 422 KLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRK 500 (591)
Q Consensus 422 k~~~~~~k~e~~~~~~el~~~~~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~~~~~~~~el~~~r~~~~~e~~~~~~ 500 (591)
-..-+..++.+.+...+..+...+..++.....+-..+..++...-........+.+++-.+-.+.-..+.++-++..+
T Consensus 1680 ~kk~~ee~~k~~e~~kk~~ee~k~~~~~~k~~~e~~~~~e~~kk~eee~k~k~ee~kkk~ee~kkk~e~~~k~eeek~k 1758 (2084)
T PTZ00121 1680 AKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKK 1758 (2084)
T ss_pred HhhhhHHHHHHHHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhhHHHHHHHHHHHHhHHHHHH
No 490
>PF04012 PspA_IM30: PspA/IM30 family; InterPro: IPR007157 This family includes PspA a protein that suppresses sigma54-dependent transcription. The PspA protein, a negative regulator of the Escherichia coli phage shock psp operon, is produced when virulence factors are exported through secretins in many Gram-negative pathogenic bacteria and its homologue in plants, VIPP1, plays a critical role in thylakoid biogenesis, essential for photosynthesis. Activation of transcription by the enhancer-dependent bacterial sigma54-containing RNA polymerase occurs through ATP hydrolysis-driven protein conformational changes enabled by activator proteins that belong to the large AAA(+) mechanochemical protein family. It has been shown that PspA directly and specifically acts upon and binds to the AAA(+) domain of the PspF transcription activator [].
Probab=82.07 E-value=55 Score=32.30 Aligned_cols=48 Identities=19% Similarity=0.293 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 438 ELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQ 485 (591)
Q Consensus 438 el~~~~~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~~~~~~~~el~ 485 (591)
+......+...+..++.........|...+......+.+++.+...+.
T Consensus 92 ~k~~~e~~~~~l~~~~~~~~~~~~~l~~~l~~l~~kl~e~k~k~~~l~ 139 (221)
T PF04012_consen 92 RKADLEEQAERLEQQLDQAEAQVEKLKEQLEELEAKLEELKSKREELK 139 (221)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334444455555555555555555555555555555555554443
No 491
>PRK12705 hypothetical protein; Provisional
Probab=81.89 E-value=96 Score=34.96 Aligned_cols=18 Identities=39% Similarity=0.381 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 007740 362 LAQAMAEAENSRREAFEE 379 (591)
Q Consensus 362 l~~~~~e~~~~r~e~~~~ 379 (591)
++++..|++.+++++..+
T Consensus 39 ~~~a~~~a~~~~~~~~~~ 56 (508)
T PRK12705 39 LQEAQKEAEEKLEAALLE 56 (508)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 345666666666655533
No 492
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=81.77 E-value=1.3 Score=43.96 Aligned_cols=37 Identities=27% Similarity=0.351 Sum_probs=0.0
Q ss_pred EEEEEEccCCCC-CChhHHHHHHHHHHcCCCCCCccccc
Q 007740 553 QVAIKMLHPHSL-QGPSEFQQEVGAYESFIFHFNLVDSF 590 (591)
Q Consensus 553 ~VAVK~L~~~~~-~~~~~F~~Ev~il~s~lrHpNLV~li 590 (591)
.||||.+..... .....|.+|+.++ ++++|||||+++
T Consensus 25 ~vaiK~~~~~~~~~~~~~~~~e~~~l-~~l~h~~iv~~~ 62 (257)
T cd05040 25 PVAVKCLKSDKLSDIMDDFLKEAAIM-HSLDHENLIRLY 62 (257)
T ss_pred EEEEeecCCcccHHHHHHHHHHHHHH-hhcCCCCcccee
No 493
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=81.59 E-value=12 Score=36.51 Aligned_cols=90 Identities=21% Similarity=0.308 Sum_probs=0.0
Q ss_pred EEEEeecCChHHHHHHHHHHHHhcCCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 46 KIYVAVAKQVKESKSVLLWALQNSGGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDMCLLIC 125 (591)
Q Consensus 46 kIlVAVD~S~~~S~~Al~wAl~~~~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~~~~~c 125 (591)
|++|++-|- +.|-.|+.||.+ .|..|+.|++..|......+.. ..-++....+|
T Consensus 1 kv~v~~SGG-kDS~~al~~a~~--~G~~v~~l~~~~~~~~~~~~~h-----------------------~~~~e~~~~~A 54 (194)
T cd01994 1 KVVALISGG-KDSCYALYRALE--EGHEVVALLNLTPEEGSSMMYH-----------------------TVNHELLELQA 54 (194)
T ss_pred CEEEEecCC-HHHHHHHHHHHH--cCCEEEEEEEEecCCCCccccc-----------------------ccCHHHHHHHH
Q ss_pred HHcCCceEEEEEec------CChHHHHHHHHHHcCCCEEEEcc
Q 007740 126 RQMGVRAEKLDTES------ESTEKGILELISHYGIRKLVMGA 162 (591)
Q Consensus 126 ~~~gV~~e~~vie~------~~~~~~Ive~a~~~~idlIVmGs 162 (591)
...||+...+.+.+ .+..+.|.+++++ +++.||-|+
T Consensus 55 ~~lgipl~~i~~~~~~e~~~~~l~~~l~~~~~~-g~~~vv~G~ 96 (194)
T cd01994 55 EAMGIPLIRIEISGEEEDEVEDLKELLRKLKEE-GVDAVVFGA 96 (194)
T ss_pred HHcCCcEEEEeCCCCchHHHHHHHHHHHHHHHc-CCCEEEECc
No 494
>PF09304 Cortex-I_coil: Cortexillin I, coiled coil; InterPro: IPR015383 This domain is predominantly found in the actin-bundling protein cortexillin I from Dictyostelium discoideum (Slime mold). The domain has a structure consisting of an 18-heptad-repeat alpha-helical coiled-coil, and is a prerequisite for the assembly of Cortexillin I []. ; PDB: 1D7M_A.
Probab=81.55 E-value=36 Score=29.85 Aligned_cols=90 Identities=20% Similarity=0.186 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 399 ASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYK 478 (591)
Q Consensus 399 ~~e~~~~ee~~~rk~~E~~l~~ek~~~~~~k~e~~~~~~el~~~~~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~~~~ 478 (591)
+++....+-..+-.-++..|..+|....++..+++.+..-++.++.+.....+++.+++.++.++...+........++.
T Consensus 6 ~l~as~~el~n~La~Le~slE~~K~S~~eL~kqkd~L~~~l~~L~~q~~s~~qr~~eLqaki~ea~~~le~eK~ak~~l~ 85 (107)
T PF09304_consen 6 ALEASQNELQNRLASLERSLEDEKTSQGELAKQKDQLRNALQSLQAQNASRNQRIAELQAKIDEARRNLEDEKQAKLELE 85 (107)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHH
Q 007740 479 KEQDELQMER 488 (591)
Q Consensus 479 ~~~~el~~~r 488 (591)
..+.+-+..+
T Consensus 86 ~r~~k~~~dk 95 (107)
T PF09304_consen 86 SRLLKAQKDK 95 (107)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhh
No 495
>KOG4807 consensus F-actin binding protein, regulates actin cytoskeletal organization [Cytoskeleton]
Probab=81.31 E-value=82 Score=33.79 Aligned_cols=144 Identities=20% Similarity=0.171 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------HHHHHHHHHhHHHH
Q 007740 363 AQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANG-------KLELERMKKQHDEV 435 (591)
Q Consensus 363 ~~~~~e~~~~r~e~~~~~~~~~~ae~e~~~a~~~a~~~e~~~~ee~~~rk~~E~~l~~e-------k~~~~~~k~e~~~~ 435 (591)
.+-..|+++||.|..--+....-|---+++|-++|- |.+++..|.+. ..--.+...+.+.+
T Consensus 359 RqHqRELekLreEKdrLLAEETAATiSAIEAMKnAh------------rEEmeRELeKsqSvnsdveaLRrQyleelqsv 426 (593)
T KOG4807|consen 359 RQHQRELEKLREEKDRLLAEETAATISAIEAMKNAH------------REEMERELEKSQSVNSDVEALRRQYLEELQSV 426 (593)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhHHHHHHHHHH------------HHHHHHHHHhhhccccChHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCcc
Q 007740 436 MEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEASSSSHMPQFF 515 (591)
Q Consensus 436 ~~el~~~~~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~~~~~~~~el~~~r~~~~~e~~~~~~~~~~~~~~~~~~~~~ 515 (591)
.++|+.+.+|-...-.+.+.+.+++..-++.++.-+..-+++....++| ..+...++..++-...........+...
T Consensus 427 qRELeVLSEQYSQKCLEnahLaqalEaerqaLRqCQrEnQELnaHNQEL---nnRLaaEItrLRtlltgdGgGtGsplaq 503 (593)
T KOG4807|consen 427 QRELEVLSEQYSQKCLENAHLAQALEAERQALRQCQRENQELNAHNQEL---NNRLAAEITRLRTLLTGDGGGTGSPLAQ 503 (593)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH---hhHHHHHHHHHHHHhccCCCCCCCcccc
Q ss_pred cccCHH
Q 007740 516 SDFSFS 521 (591)
Q Consensus 516 ~~~s~~ 521 (591)
.+-.|+
T Consensus 504 gkdayE 509 (593)
T KOG4807|consen 504 GKDAYE 509 (593)
T ss_pred Ccchhh
No 496
>TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins.
Probab=81.30 E-value=83 Score=33.85 Aligned_cols=128 Identities=14% Similarity=0.099 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhHHHHHHHHHhH
Q 007740 356 DNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAE---ELKRRKEFEEALANGKLELERMKKQH 432 (591)
Q Consensus 356 ~~~~~~l~~~~~e~~~~r~e~~~~~~~~~~ae~e~~~a~~~a~~~e~~~~e---e~~~rk~~E~~l~~ek~~~~~~k~e~ 432 (591)
..+..++.....++..++.++..-......++.+...+.........++.+ -.......+.++...+.++...+.++
T Consensus 140 ~~~~~~~~~l~~~i~~~~~~i~~~~~~l~~~~~~l~~~~~~~~~~~~L~~~g~is~~~~~~~~~~~~~~~~~l~~~~~~l 219 (423)
T TIGR01843 140 STLRAQLELILAQIKQLEAELAGLQAQLQALRQQLEVISEELEARRKLKEKGLVSRLELLELERERAEAQGELGRLEAEL 219 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007740 433 DEVMEELQIALDQKSLLESQ-IAESDQTAKELEQKIISAVELLQNYKKEQDE 483 (591)
Q Consensus 433 ~~~~~el~~~~~~~~~l~~~-~~e~~~~~~ele~~~~~~~~~l~~~~~~~~e 483 (591)
+.+..++..++.+...+... ..+....+.++++++..+...+...+..++.
T Consensus 220 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~l~~ 271 (423)
T TIGR01843 220 EVLKRQIDELQLERQQIEQTFREEVLEELTEAQARLAELRERLNKARDRLQR 271 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
No 497
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=81.19 E-value=0.75 Score=41.20 Aligned_cols=43 Identities=12% Similarity=0.244 Sum_probs=0.0
Q ss_pred cCCccccccceeEEEEEEc-CeEEEEEEccCCCCCChhHHHHHHHHH
Q 007740 532 PSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEVGAY 577 (591)
Q Consensus 532 ~~~~iG~G~~G~Vykg~l~-g~~VAVK~L~~~~~~~~~~F~~Ev~il 577 (591)
+...||.|+.|.||+|++. |..||||+.++.. ...+...+.+|
T Consensus 15 d~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i---~~~i~~Dl~~l 58 (119)
T PF03109_consen 15 DPEPLASASIAQVHRARLKDGEEVAVKVQRPGI---EEQIEADLRIL 58 (119)
T ss_pred CcchhhheehhhheeeeecccchhhhhhcchHH---HHHHHHHHHHH
No 498
>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms]
Probab=81.14 E-value=1.2e+02 Score=35.62 Aligned_cols=141 Identities=18% Similarity=0.188 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHH
Q 007740 362 LAQAMAEAENSRREAFEEALRRGKAEKDAIESIRRAKASESLYAEELKRRKEFEEALANGKLELERMKKQHDEVMEELQI 441 (591)
Q Consensus 362 l~~~~~e~~~~r~e~~~~~~~~~~ae~e~~~a~~~a~~~e~~~~ee~~~rk~~E~~l~~ek~~~~~~k~e~~~~~~el~~ 441 (591)
+.+-..|+|+.|-.|....++.+..-+..-.-+|...++.....+.+...|----++..-|..++..|++++++.+++..
T Consensus 349 fddk~~eLEKkrd~al~dvr~i~e~k~nve~elqsL~~l~aerqeQidelKn~if~~e~~~~dhe~~kneL~~a~ekld~ 428 (1265)
T KOG0976|consen 349 FDDKLNELEKKRDMALMDVRSIQEKKENVEEELQSLLELQAERQEQIDELKNHIFRLEQGKKDHEAAKNELQEALEKLDL 428 (1265)
T ss_pred hhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccchhHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhh
Q 007740 442 ALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQ---MERDKAVKEAEELRKSR 502 (591)
Q Consensus 442 ~~~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~~~~~~~~el~---~~r~~~~~e~~~~~~~~ 502 (591)
+......++.|+....--..-.+...+.+..+..++-..++.++ ...++.-++.+.++...
T Consensus 429 mgthl~mad~Q~s~fk~Lke~aegsrrraIeQcnemv~rir~l~~sle~qrKVeqe~emlKaen 492 (1265)
T KOG0976|consen 429 MGTHLSMADYQLSNFKVLKEHAEGSRRRAIEQCNEMVDRIRALMDSLEKQRKVEQEYEMLKAEN 492 (1265)
T ss_pred HhHHHHHHHHHHhhHHHHHHhhhhhHhhHHHHHHHHHHHHHHHhhChhhhcchHHHHHHHHHHH
No 499
>PRK10660 tilS tRNA(Ile)-lysidine synthetase; Provisional
Probab=81.04 E-value=11 Score=41.73 Aligned_cols=102 Identities=20% Similarity=0.234 Sum_probs=0.0
Q ss_pred CCEEEEeecCChHHHHHHHHHHHHhc---CCCeEEEEEEeCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 007740 44 EDKIYVAVAKQVKESKSVLLWALQNS---GGKRICIIHVHTPAQMIPVMGTKFPASSLEEEKVQAYREIERQDMHNHLDM 120 (591)
Q Consensus 44 ~~kIlVAVD~S~~~S~~Al~wAl~~~---~g~~I~llHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~~ 120 (591)
+.+|+|||-|. ..|...|....... .|-.|+++||..... ....+....
T Consensus 15 ~~~ilvavSGG-~DS~~Ll~~l~~~~~~~~~~~l~a~hvnhglr---------------------------~~s~~~~~~ 66 (436)
T PRK10660 15 SRQILVAFSGG-LDSTVLLHLLVQWRTENPGVTLRAIHVHHGLS---------------------------PNADSWVKH 66 (436)
T ss_pred CCeEEEEecCC-HHHHHHHHHHHHHHHhcCCCeEEEEEEeCCCC---------------------------cchHHHHHH
Q ss_pred HHHHHHHcCCceEEEEEecCChHHHHHHHHHHcCC----------CEEEEccCCCchhhHHhc
Q 007740 121 CLLICRQMGVRAEKLDTESESTEKGILELISHYGI----------RKLVMGAAADKHYKKKMM 173 (591)
Q Consensus 121 ~~~~c~~~gV~~e~~vie~~~~~~~Ive~a~~~~i----------dlIVmGs~g~~~~~R~l~ 173 (591)
...+|.+.||++....+........+-..|.+... +.|++|-|.+....-+|+
T Consensus 67 ~~~~~~~l~i~~~~~~~~~~~~~~~~e~~AR~~Ry~~~~~~~~~~~~l~~aHh~DDq~ET~L~ 129 (436)
T PRK10660 67 CEQVCQQWQVPLVVERVQLDQRGLGIEAAARQARYQAFARTLLPGEVLVTAQHLDDQCETFLL 129 (436)
T ss_pred HHHHHHHcCCcEEEEEEeccCCCCCHHHHHHHHHHHHHHHHHHhCCEEEEcCchHHHHHHHHH
No 500
>PTZ00121 MAEBL; Provisional
Probab=81.03 E-value=1.6e+02 Score=37.05 Aligned_cols=151 Identities=16% Similarity=0.191 Sum_probs=0.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHh-HHHHHHHHHh
Q 007740 355 DDNLYDQLAQAMAEAENSRREAFEEALRRGKAEKDAIESIR--RAKASESLYAEELKRRKEFEEALANG-KLELERMKKQ 431 (591)
Q Consensus 355 ~~~~~~~l~~~~~e~~~~r~e~~~~~~~~~~ae~e~~~a~~--~a~~~e~~~~ee~~~rk~~E~~l~~e-k~~~~~~k~e 431 (591)
++.....-.....++++.......+-.++.++.+.+.++.. .++.+|.....|..++.+.+.+...+ +.+.++...+
T Consensus 1161 EEaRr~EEaRraEeArr~EEaRraEE~Rr~EElRraEEaRkaEEaRRlEE~RraEEARraEEErR~EE~RraEEaRK~aE 1240 (2084)
T PTZ00121 1161 EDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAE 1240 (2084)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 007740 432 HDEVMEELQIALDQKSLLESQIAESDQTAKELEQKIISAVELLQNYKKEQDELQMERDKAVKEAEELRKSRKEA 505 (591)
Q Consensus 432 ~~~~~~el~~~~~~~~~l~~~~~e~~~~~~ele~~~~~~~~~l~~~~~~~~el~~~r~~~~~e~~~~~~~~~~~ 505 (591)
-.+..++.+.+.+....-+.++++..++..+.+.....-...++-+..++..-...+....+.+++.++.....
T Consensus 1241 EAkraEEeR~~EE~Rk~Eear~a~~A~r~aa~k~Ee~RrAee~~k~Ee~r~a~~~kk~ee~kkaee~~kk~eea 1314 (2084)
T PTZ00121 1241 EAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEA 1314 (2084)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHHHH
Done!