Query 007741
Match_columns 591
No_of_seqs 577 out of 4639
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 09:20:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007741.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007741hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wdy_A 2-5A-dependent ribonucl 100.0 2E-41 6.9E-46 337.5 30.3 262 73-366 4-281 (285)
2 1n11_A Ankyrin; clathrin, BAND 100.0 7.7E-41 2.6E-45 355.4 33.0 319 63-392 69-398 (437)
3 1n11_A Ankyrin; clathrin, BAND 100.0 7.8E-41 2.7E-45 355.4 33.0 290 68-390 8-297 (437)
4 4g8k_A 2-5A-dependent ribonucl 100.0 1.8E-40 6.3E-45 340.1 28.4 257 74-363 25-326 (337)
5 3d9h_A CDNA FLJ77766, highly s 100.0 4.9E-40 1.7E-44 328.8 24.6 267 71-363 12-279 (285)
6 3utm_A Tankyrase-1; tankyrase, 100.0 1.2E-39 4.3E-44 334.9 26.2 271 69-371 19-313 (351)
7 2xai_A ASB-9, ankyrin repeat a 100.0 4.4E-40 1.5E-44 324.8 20.4 242 73-346 2-250 (261)
8 2fo1_E LIN-12 protein; beta-ba 100.0 2.2E-40 7.4E-45 344.5 18.6 264 68-364 88-372 (373)
9 1yyh_A HN1;, notch 1, ankyrin 100.0 3.5E-39 1.2E-43 316.8 21.5 232 122-362 3-247 (253)
10 3ljn_A Hypothetical protein; a 100.0 1.2E-39 4E-44 337.8 16.9 263 67-363 13-314 (364)
11 3b7b_A Euchromatic histone-lys 100.0 4.7E-38 1.6E-42 305.1 26.9 231 122-358 4-234 (237)
12 1oy3_D Transcription factor in 100.0 7.5E-39 2.5E-43 318.9 20.8 255 68-345 3-269 (282)
13 1k1a_A B-cell lymphoma 3-encod 100.0 3.5E-38 1.2E-42 306.6 21.5 234 122-362 2-240 (241)
14 1yyh_A HN1;, notch 1, ankyrin 100.0 5E-38 1.7E-42 308.5 22.8 228 68-322 4-245 (253)
15 1wdy_A 2-5A-dependent ribonucl 100.0 4.4E-37 1.5E-41 306.0 28.5 235 71-332 36-284 (285)
16 3b7b_A Euchromatic histone-lys 100.0 6.6E-37 2.3E-41 297.0 26.0 227 68-321 5-231 (237)
17 1k1a_A B-cell lymphoma 3-encod 100.0 1.3E-37 4.3E-42 302.7 20.5 230 69-322 4-238 (241)
18 3aji_A 26S proteasome non-ATPa 100.0 6.1E-37 2.1E-41 296.1 24.4 228 126-363 3-230 (231)
19 3aji_A 26S proteasome non-ATPa 100.0 4.8E-37 1.6E-41 296.8 23.4 225 71-322 3-227 (231)
20 2xai_A ASB-9, ankyrin repeat a 100.0 1E-36 3.4E-41 300.7 24.2 221 128-363 2-222 (261)
21 3ljn_A Hypothetical protein; a 100.0 2.5E-37 8.5E-42 320.3 20.8 235 119-364 10-270 (364)
22 3d9h_A CDNA FLJ77766, highly s 100.0 5.7E-37 2E-41 306.5 22.6 229 69-329 54-282 (285)
23 2dzn_A Probable 26S proteasome 100.0 8.1E-37 2.8E-41 294.4 22.7 222 129-359 2-226 (228)
24 2dzn_A Probable 26S proteasome 100.0 4.2E-36 1.4E-40 289.5 23.8 220 74-321 2-226 (228)
25 4b93_B Ankyrin repeat domain-c 100.0 4.8E-37 1.6E-41 304.1 15.5 217 124-345 6-229 (269)
26 2fo1_E LIN-12 protein; beta-ba 100.0 8.7E-37 3E-41 317.2 16.9 257 123-392 88-367 (373)
27 1oy3_D Transcription factor in 100.0 7.7E-36 2.6E-40 297.1 22.5 249 122-378 2-265 (282)
28 1s70_B 130 kDa myosin-binding 100.0 9.6E-37 3.3E-41 306.7 16.0 238 72-344 38-275 (299)
29 3eu9_A Huntingtin-interacting 100.0 1.3E-35 4.5E-40 287.7 23.4 233 122-364 2-236 (240)
30 4b93_B Ankyrin repeat domain-c 100.0 1.6E-36 5.3E-41 300.3 16.5 222 71-312 8-230 (269)
31 3utm_A Tankyrase-1; tankyrase, 100.0 1.2E-35 3.9E-40 305.2 23.4 263 121-393 16-302 (351)
32 4g8k_A 2-5A-dependent ribonucl 100.0 4.6E-35 1.6E-39 300.0 27.3 253 126-391 22-321 (337)
33 3eu9_A Huntingtin-interacting 100.0 5.4E-35 1.9E-39 283.4 23.7 231 70-327 5-236 (240)
34 3kea_A K1L; tropism, ANK repea 100.0 1.6E-35 5.4E-40 296.0 20.4 224 122-366 24-249 (285)
35 2f8y_A Notch homolog 1, transl 100.0 3.8E-35 1.3E-39 281.8 21.0 217 140-365 2-218 (223)
36 2f8y_A Notch homolog 1, transl 100.0 1.9E-34 6.7E-39 276.9 21.3 214 85-326 2-216 (223)
37 1ikn_D Protein (I-kappa-B-alph 100.0 4.1E-35 1.4E-39 284.5 11.8 218 123-344 2-229 (236)
38 3kea_A K1L; tropism, ANK repea 100.0 1.6E-34 5.4E-39 288.8 15.3 227 67-332 24-252 (285)
39 1sw6_A Regulatory protein SWI6 100.0 2.6E-34 8.8E-39 293.1 12.6 262 57-345 35-327 (327)
40 1ikn_D Protein (I-kappa-B-alph 100.0 9.9E-34 3.4E-38 274.7 14.1 221 68-310 2-229 (236)
41 2rfa_A Transient receptor pote 100.0 1.1E-32 3.9E-37 266.3 20.1 192 128-322 2-219 (232)
42 1s70_B 130 kDa myosin-binding 100.0 5.5E-33 1.9E-37 279.2 18.4 272 79-381 3-275 (299)
43 2rfa_A Transient receptor pote 100.0 2.5E-32 8.6E-37 263.9 21.9 197 73-291 2-222 (232)
44 3hra_A Ankyrin repeat family p 100.0 7.1E-32 2.4E-36 254.6 24.1 193 126-322 2-200 (201)
45 3hra_A Ankyrin repeat family p 100.0 1.2E-31 4.1E-36 253.0 23.0 194 72-289 3-201 (201)
46 2pnn_A Transient receptor pote 100.0 5.9E-33 2E-37 275.5 11.5 217 119-338 3-271 (273)
47 2pnn_A Transient receptor pote 100.0 4.5E-32 1.5E-36 269.1 15.8 218 68-304 7-271 (273)
48 2etb_A Transient receptor pote 100.0 1.2E-31 4E-36 263.4 15.8 204 74-322 2-243 (256)
49 2etb_A Transient receptor pote 100.0 2.3E-31 8E-36 261.3 16.0 205 128-365 1-248 (256)
50 3jxi_A Vanilloid receptor-rela 100.0 3.4E-31 1.2E-35 260.6 12.9 201 71-290 2-249 (260)
51 4gpm_A Engineered protein OR26 100.0 6.3E-30 2.2E-34 234.1 20.1 157 167-328 7-163 (169)
52 4gpm_A Engineered protein OR26 100.0 2E-29 6.7E-34 230.8 19.7 157 131-292 6-162 (169)
53 1sw6_A Regulatory protein SWI6 100.0 3.5E-31 1.2E-35 269.9 8.1 257 74-376 23-321 (327)
54 3jxi_A Vanilloid receptor-rela 100.0 3.6E-30 1.2E-34 253.3 13.5 208 126-364 2-251 (260)
55 4hbd_A KN motif and ankyrin re 100.0 4.1E-30 1.4E-34 255.4 13.5 193 129-324 76-274 (276)
56 4hbd_A KN motif and ankyrin re 100.0 6.8E-29 2.3E-33 246.6 13.3 192 165-362 77-274 (276)
57 3v30_A DNA-binding protein rfx 100.0 2.5E-28 8.5E-33 224.4 15.3 168 166-337 4-171 (172)
58 2rfm_A Putative ankyrin repeat 100.0 6.6E-28 2.3E-32 225.8 17.9 166 119-289 25-190 (192)
59 3v30_A DNA-binding protein rfx 100.0 1.2E-27 4.3E-32 219.7 17.0 170 129-303 2-171 (172)
60 2aja_A Ankyrin repeat family p 100.0 1.4E-30 4.8E-35 268.6 -4.3 236 71-345 89-360 (376)
61 2rfm_A Putative ankyrin repeat 99.9 2E-27 6.8E-32 222.6 16.9 161 158-322 29-189 (192)
62 1ihb_A P18-INK4C(INK6), cyclin 99.9 2.4E-27 8.1E-32 215.4 17.0 152 166-321 7-158 (162)
63 1ihb_A P18-INK4C(INK6), cyclin 99.9 2.5E-27 8.7E-32 215.2 16.8 155 131-290 7-161 (162)
64 3v31_A Ankyrin repeat family A 99.9 5.6E-27 1.9E-31 214.2 18.1 159 128-291 2-160 (167)
65 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.4E-26 4.6E-31 212.3 18.6 156 127-321 12-167 (169)
66 3v31_A Ankyrin repeat family A 99.9 7.6E-27 2.6E-31 213.3 16.9 156 199-362 4-159 (167)
67 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.6E-26 5.6E-31 211.7 19.1 159 195-361 11-169 (169)
68 2vge_A RELA-associated inhibit 99.9 7.8E-30 2.7E-34 246.0 -3.6 177 162-345 19-199 (229)
69 3twr_A Tankyrase-2; ankyrin re 99.9 4E-27 1.4E-31 214.8 13.2 158 197-362 7-164 (165)
70 1awc_B Protein (GA binding pro 99.9 2.1E-26 7.1E-31 207.3 17.7 149 166-319 4-152 (153)
71 3f6q_A Integrin-linked protein 99.9 9.7E-27 3.3E-31 215.3 15.9 163 166-332 7-169 (179)
72 2vge_A RELA-associated inhibit 99.9 1E-28 3.4E-33 238.2 2.0 192 122-321 14-209 (229)
73 3f6q_A Integrin-linked protein 99.9 1.5E-26 5.2E-31 214.0 16.0 165 196-367 3-167 (179)
74 1awc_B Protein (GA binding pro 99.9 4.1E-26 1.4E-30 205.4 18.0 151 129-285 2-152 (153)
75 3twr_A Tankyrase-2; ankyrin re 99.9 1.4E-26 4.9E-31 211.0 14.5 159 126-289 5-163 (165)
76 1bd8_A P19INK4D CDK4/6 inhibit 99.9 4.7E-26 1.6E-30 205.5 16.9 153 129-287 2-154 (156)
77 1bd8_A P19INK4D CDK4/6 inhibit 99.9 6.3E-26 2.2E-30 204.6 16.9 154 164-322 2-155 (156)
78 2aja_A Ankyrin repeat family p 99.9 7.8E-29 2.7E-33 255.6 -3.2 222 126-366 89-347 (376)
79 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.1E-26 3.7E-31 225.7 8.6 209 126-344 2-228 (239)
80 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.3E-26 4.5E-31 225.0 5.3 178 162-345 3-192 (239)
81 1bi7_B P16INK4A, MTS1, multipl 99.9 4.8E-24 1.6E-28 192.5 11.5 144 194-342 8-152 (156)
82 3t8k_A Uncharacterized protein 99.9 2.7E-24 9.3E-29 199.9 8.7 156 198-362 6-178 (186)
83 1d9s_A Cyclin-dependent kinase 99.9 1E-23 3.4E-28 185.7 10.9 131 224-362 4-135 (136)
84 1bi7_B P16INK4A, MTS1, multipl 99.9 1.3E-23 4.4E-28 189.7 11.0 143 123-271 6-149 (156)
85 1d9s_A Cyclin-dependent kinase 99.9 2.6E-23 8.8E-28 183.0 12.2 128 122-254 5-133 (136)
86 3t8k_A Uncharacterized protein 99.9 1E-23 3.5E-28 196.0 9.2 154 129-289 6-177 (186)
87 2jab_A H10-2-G3; HER2, darpin, 99.9 2.9E-22 1E-26 176.3 12.0 123 231-360 13-135 (136)
88 1n0r_A 4ANK, 4 ankyrin repeats 99.9 7.1E-22 2.4E-26 170.6 14.1 121 198-321 2-122 (126)
89 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.3E-21 4.5E-26 168.9 15.6 125 128-256 1-125 (126)
90 2jab_A H10-2-G3; HER2, darpin, 99.9 1.2E-21 4.1E-26 172.3 14.3 125 126-254 11-135 (136)
91 3c5r_A BARD-1, BRCA1-associate 99.9 2.5E-22 8.6E-27 176.8 8.5 127 227-360 5-131 (137)
92 3deo_A Signal recognition part 99.9 8.6E-22 2.9E-26 182.7 9.9 143 124-288 39-181 (183)
93 3ui2_A Signal recognition part 99.9 7.7E-22 2.6E-26 192.0 9.4 142 125-288 41-182 (244)
94 3deo_A Signal recognition part 99.8 2.6E-21 8.7E-26 179.5 11.0 140 161-322 41-181 (183)
95 2b0o_E UPLC1; arfgap, structur 99.8 1.2E-20 4.2E-25 189.2 16.2 140 164-312 151-298 (301)
96 3c5r_A BARD-1, BRCA1-associate 99.8 1.5E-21 5.2E-26 171.8 8.4 125 194-321 6-130 (137)
97 3aaa_C Myotrophin, protein V-1 99.8 3.9E-21 1.3E-25 165.8 9.9 111 229-342 4-114 (123)
98 3ui2_A Signal recognition part 99.8 5.6E-21 1.9E-25 185.8 11.8 167 128-321 14-181 (244)
99 1dcq_A PYK2-associated protein 99.8 3.5E-20 1.2E-24 183.7 15.1 127 232-364 130-264 (278)
100 2b0o_E UPLC1; arfgap, structur 99.8 1.3E-20 4.4E-25 189.0 11.6 140 74-245 151-299 (301)
101 1dcq_A PYK2-associated protein 99.8 2.3E-20 8E-25 184.9 13.0 194 124-325 61-262 (278)
102 3ehr_A Osteoclast-stimulating 99.8 7.2E-21 2.4E-25 182.2 8.4 133 122-258 66-199 (222)
103 3ehr_A Osteoclast-stimulating 99.8 7.8E-21 2.7E-25 181.9 8.4 129 160-290 69-197 (222)
104 3aaa_C Myotrophin, protein V-1 99.8 1.4E-20 4.7E-25 162.4 9.1 108 198-308 7-114 (123)
105 3jue_A Arfgap with coiled-coil 99.8 8.9E-19 3E-23 179.8 13.7 147 71-242 196-347 (368)
106 2l6b_A NR1C; ankyrin, consensu 99.8 5.4E-19 1.8E-23 150.3 9.3 109 227-338 4-112 (115)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.4E-18 4.8E-23 141.7 11.3 92 231-325 1-92 (93)
108 3jue_A Arfgap with coiled-coil 99.8 1.1E-18 3.6E-23 179.2 12.4 144 198-344 199-347 (368)
109 3lvq_E ARF-GAP with SH3 domain 99.8 1.6E-18 5.4E-23 186.5 13.6 98 229-329 168-268 (497)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2.4E-18 8.1E-23 140.3 11.4 68 119-188 25-92 (93)
111 3lvq_E ARF-GAP with SH3 domain 99.8 4.1E-18 1.4E-22 183.2 15.7 135 166-309 134-276 (497)
112 2l6b_A NR1C; ankyrin, consensu 99.7 2E-17 6.7E-22 140.5 10.1 90 126-218 6-95 (115)
113 2zgd_A 3 repeat synthetic anky 99.6 6E-16 2.1E-20 130.3 9.4 91 227-319 19-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.6 1E-15 3.5E-20 128.9 10.3 96 119-217 14-109 (110)
115 2ks1_B Epidermal growth factor 62.8 4 0.00014 26.7 2.0 29 525-553 9-37 (44)
116 2l2t_A Receptor tyrosine-prote 62.1 5.7 0.00019 26.0 2.6 29 525-553 8-36 (44)
117 4ev6_A Magnesium transport pro 39.6 35 0.0012 33.4 5.5 23 496-518 278-300 (339)
118 2l8s_A Integrin alpha-1; trans 36.7 27 0.00091 23.9 2.8 25 524-548 7-31 (54)
119 2knc_A Integrin alpha-IIB; tra 31.5 27 0.00093 23.9 2.2 25 524-548 10-34 (54)
120 2k1a_A Integrin alpha-IIB; sin 29.2 49 0.0017 21.3 2.9 24 525-548 9-32 (42)
121 2iub_A CORA, divalent cation t 28.6 53 0.0018 32.5 4.8 22 496-517 302-323 (363)
122 2jwa_A Receptor tyrosine-prote 27.0 35 0.0012 22.3 2.0 25 525-550 10-34 (44)
123 3gvo_A Pumilio 2, pumilio homo 25.7 21 0.00071 35.3 1.2 96 262-357 213-319 (351)
124 2knc_B Integrin beta-3; transm 23.9 43 0.0015 25.0 2.3 25 525-549 9-33 (79)
125 2zy9_A Mg2+ transporter MGTE; 21.7 3.4E+02 0.012 27.7 9.5 29 460-488 343-371 (473)
No 1
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2e-41 Score=337.49 Aligned_cols=262 Identities=28% Similarity=0.368 Sum_probs=239.4
Q ss_pred CCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhccccccc-CCCCCcHHHHHHHhCcHHHHHHHHhc
Q 007741 73 HNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEV-NELGETALFTAADKGHIEVVNELLKY 151 (591)
Q Consensus 73 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-n~~g~TpL~~Aa~~g~~~~v~~Ll~~ 151 (591)
+|.||||.|++.|+.+++++|++. +..++.. +..|.||||+|+..|+.+++++|+++
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~----------------------g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 61 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEG----------------------GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH 61 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHT----------------------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHc----------------------CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 466999999999999999999986 4446655 78899999999999999999999998
Q ss_pred CCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceec---
Q 007741 152 STKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEIS--- 228 (591)
Q Consensus 152 ~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~--- 228 (591)
+.+ ++..+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++++. .++..
T Consensus 62 g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~ 137 (285)
T 1wdy_A 62 GAD--PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV-NECDFYGFTAFMEAAVYGKVKALKFLYKRGA-NVNLRRKT 137 (285)
T ss_dssp TCC--TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTC-CTTCCCCC
T ss_pred CCC--CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCcccCCHHHHHHHhCCHHHHHHHHHhCC-Cccccccc
Confidence 755 5678889999999999999999999999999998 6678899999999999999999999999854 34444
Q ss_pred -------CCCCCcHHHHHHHcCCHHHHHHHHhc-CcccccccCCCCCcHHHHHHhCCC----HHHHHHHHHcCcccccCC
Q 007741 229 -------RSNGKNALHFAARQGHVDVVKALLSK-DPQLARRTDKKGQTALHMAVKGQS----CEVVKLLLEADAAIVMLP 296 (591)
Q Consensus 229 -------~~~g~tpLh~A~~~g~~~~v~~Ll~~-~~~~~~~~d~~g~t~Lh~A~~~~~----~~~v~~Ll~~~~~~~~~~ 296 (591)
+..|.||||.|+..|+.+++++|++. +.++ +..|..|+||||+|+..++ .+++++|+++|++ ++.+
T Consensus 138 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~-~~~~ 215 (285)
T 1wdy_A 138 KEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-VNVR 215 (285)
T ss_dssp CHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCT-TCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCC-SSCC
T ss_pred HHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCC-CccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCC-CCCc
Confidence 77899999999999999999999998 7776 7779999999999999999 9999999999998 8899
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCccccc
Q 007741 297 DKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVRAN 366 (591)
Q Consensus 297 d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 366 (591)
|..|+||||+|+..|+.+++++|++..|++++.+|..|+||||+|+..+ +.+++++|+++|++...
T Consensus 216 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~----~~~i~~~Ll~~Ga~~~~ 281 (285)
T 1wdy_A 216 GERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELK----LKKIAELLCKRGASTDC 281 (285)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTT----CHHHHHHHHHHSSCSCC
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcC----cHHHHHHHHHcCCCCCc
Confidence 9999999999999999999999999779999999999999999999999 89999999999997543
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.7e-41 Score=355.44 Aligned_cols=319 Identities=26% Similarity=0.308 Sum_probs=254.2
Q ss_pred cchhhhccCCCCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCc-ch----------hHHHHhhcccccccCCCCCc
Q 007741 63 KKYVKQVTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAE-FD----------TEVAEIRSSVVNEVNELGET 131 (591)
Q Consensus 63 ~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~-~~----------~~~~~~~~~~~~~~n~~g~T 131 (591)
........+.+|.||||.|+..|+.+++++|++...........+.. .. .......+...+..+..|.|
T Consensus 69 ~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t 148 (437)
T 1n11_A 69 NKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFT 148 (437)
T ss_dssp HTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCC
T ss_pred CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCC
Confidence 33344556788999999999999999999999764322111111110 00 00011124556667888889
Q ss_pred HHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCH
Q 007741 132 ALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHT 211 (591)
Q Consensus 132 pL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~ 211 (591)
|||+|+..|+.+++++|++++.+ .+..+..|.||||+|+..|+.+++++|+++++++ ...+..|.||||+|+..|+.
T Consensus 149 ~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~ 225 (437)
T 1n11_A 149 PLHVAAKYGKVRVAELLLERDAH--PNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSP-HSPAWNGYTPLHIAAKQNQV 225 (437)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC--TTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCS-CCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcCCH
Confidence 99999999999999999987654 4667778899999999999999999999988886 55677889999999999999
Q ss_pred HHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcc
Q 007741 212 AVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAA 291 (591)
Q Consensus 212 ~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~ 291 (591)
+++++|++. +...+..+..|.||||+|+..|+.+++++|++.++++ +..|..|+||||+|+..|+.+++++|+++|.+
T Consensus 226 ~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 303 (437)
T 1n11_A 226 EVARSLLQY-GGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANG-NLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM 303 (437)
T ss_dssp HHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHc-CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCcc
Confidence 999999987 4456777888999999999999999999999999887 66788999999999999999999999999887
Q ss_pred cccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCcccccccCCc
Q 007741 292 IVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVRANELNQP 371 (591)
Q Consensus 292 ~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~ 371 (591)
++.+|..|+||||+|+..|+.+++++|++. |+++|.+|..|+||||+|+..+ +.+++++|+++|++........
T Consensus 304 -~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-gad~n~~~~~g~t~L~~A~~~g----~~~iv~~Ll~~ga~~~~~~~~g 377 (437)
T 1n11_A 304 -VDATTRMGYTPLHVASHYGNIKLVKFLLQH-QADVNAKTKLGYSPLHQAAQQG----HTDIVTLLLKNGASPNEVSSDG 377 (437)
T ss_dssp -TTCCCSSCCCHHHHHHHSSCSHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTT----CHHHHHHHHHTTCCSCCCCSSS
T ss_pred -CCCCCCCCCCHHHHHHHcCcHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHCC----hHHHHHHHHHCcCCCCCCCCCC
Confidence 788899999999999999999999999994 9999999999999999999998 8899999999999877766666
Q ss_pred hHHhhhhhhhhhhhhhhHHHH
Q 007741 372 RDELRKTVTQIKKDVHTQLEQ 392 (591)
Q Consensus 372 ~~~l~~~~~~~~~~~~~~l~~ 392 (591)
.+.+.........++.+.++.
T Consensus 378 ~t~l~~A~~~g~~~~~~~l~~ 398 (437)
T 1n11_A 378 TTPLAIAKRLGYISVTDVLKV 398 (437)
T ss_dssp CCHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHh
Confidence 666666555555555554443
No 3
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.8e-41 Score=355.41 Aligned_cols=290 Identities=31% Similarity=0.353 Sum_probs=243.0
Q ss_pred hccCCCCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccCCCCCcHHHHHHHhCcHHHHHH
Q 007741 68 QVTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNE 147 (591)
Q Consensus 68 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~ 147 (591)
...+..|.||||.||..|+.++|++|++. +..++..|..|.||||+|+..|+.++|++
T Consensus 8 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~----------------------g~~~~~~~~~~~t~L~~A~~~g~~~~v~~ 65 (437)
T 1n11_A 8 GGGGESGLTPLHVASFMGHLPIVKNLLQR----------------------GASPNVSNVKVETPLHMAARAGHTEVAKY 65 (437)
T ss_dssp -------CCHHHHHHHHTCHHHHHHHHHT----------------------TCCSCCSSSCCCCHHHHHHHHTCHHHHHH
T ss_pred cccCCCCCCHHHHHHHCCCHHHHHHHHHc----------------------CCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 34677899999999999999999999986 56678888899999999999999999999
Q ss_pred HHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccee
Q 007741 148 LLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEI 227 (591)
Q Consensus 148 Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~ 227 (591)
|++++++ ++.++..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++++ .....
T Consensus 66 Ll~~g~~--~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~ 141 (437)
T 1n11_A 66 LLQNKAK--VNAKAKDDQTPLHCAARIGHTNMVKLLLENNANP-NLATTAGHTPLHIAAREGHVETVLALLEKE-ASQAC 141 (437)
T ss_dssp HHHHTCC--SSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCC
T ss_pred HHhCCCC--CCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCCcC
Confidence 9998754 5677888999999999999999999999999887 567788999999999999999999999884 44566
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHH
Q 007741 228 SRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVA 307 (591)
Q Consensus 228 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A 307 (591)
.+..|.||||+|+..|+.+++++|+++++++ +..+..|.||||+|+..|+.+++++|++++++ ++..+.+|.||||+|
T Consensus 142 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A 219 (437)
T 1n11_A 142 MTKKGFTPLHVAAKYGKVRVAELLLERDAHP-NAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGS-PHSPAWNGYTPLHIA 219 (437)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCC-SCCCCTTCCCHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCcCCCCCCHHHHH
Confidence 7888999999999999999999999999887 66788999999999999999999999999887 777888899999999
Q ss_pred HHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCcccccccCCchHHhhhhhhhhhhhhh
Q 007741 308 TRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVRANELNQPRDELRKTVTQIKKDVH 387 (591)
Q Consensus 308 ~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~l~~~~~~~~~~~~ 387 (591)
+..|+.+++++|++ .|++++..|..|.||||+|+..+ +.+++++|++.|+............+.........++.
T Consensus 220 ~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g----~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~ 294 (437)
T 1n11_A 220 AKQNQVEVARSLLQ-YGGSANAESVQGVTPLHLAAQEG----HAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVA 294 (437)
T ss_dssp HHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTT----CHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred HHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHCC----CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 99999999999998 48899999999999999999988 88899999998887665555555566655555444444
Q ss_pred hHH
Q 007741 388 TQL 390 (591)
Q Consensus 388 ~~l 390 (591)
+.+
T Consensus 295 ~~L 297 (437)
T 1n11_A 295 DVL 297 (437)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 4
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.8e-40 Score=340.13 Aligned_cols=257 Identities=25% Similarity=0.281 Sum_probs=145.9
Q ss_pred CCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccCC-CCCcHHHHHHHhCcHHHHHHHHhcC
Q 007741 74 NDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNE-LGETALFTAADKGHIEVVNELLKYS 152 (591)
Q Consensus 74 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~-~g~TpL~~Aa~~g~~~~v~~Ll~~~ 152 (591)
|+|+||.||+.|+.++|+.||+. ++.+|.++. .|.||||+||..|+.++|++|+++|
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~----------------------Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~g 82 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEG----------------------GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG 82 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH----------------------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CChHHHHHHHcCCHHHHHHHHHC----------------------CCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcC
Confidence 55999999999999999999986 677887775 4999999999999999999999988
Q ss_pred CCcc-------------------------------CccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcc---------
Q 007741 153 TKEG-------------------------------LTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQ--------- 192 (591)
Q Consensus 153 ~~~~-------------------------------~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~--------- 192 (591)
++.+ ++..|..|.||||+|+..|+.+++++|+++|+++..
T Consensus 83 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~ 162 (337)
T 4g8k_A 83 ADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQE 162 (337)
T ss_dssp CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC----
T ss_pred CchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccc
Confidence 6532 223344455555555555555555555555444321
Q ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCC----HHHHHHHHhcCcccccccCCCCCc
Q 007741 193 TTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGH----VDVVKALLSKDPQLARRTDKKGQT 268 (591)
Q Consensus 193 ~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~----~~~v~~Ll~~~~~~~~~~d~~g~t 268 (591)
..+..|.||||+|+..|+.+++++||++.+.+++..|..|.|++|.++..++ .+++++|+++|+++ +.+|..|+|
T Consensus 163 ~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~-n~~d~~g~t 241 (337)
T 4g8k_A 163 RLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV-NVRGERGKT 241 (337)
T ss_dssp -CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCT-TCCCGGGCC
T ss_pred cccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCC-CCcCCCCCC
Confidence 1122344555555555555555555544444444445555555554443222 23444455555544 334445555
Q ss_pred HHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCCh
Q 007741 269 ALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSE 348 (591)
Q Consensus 269 ~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~ 348 (591)
|||+|+..|+.++++.|++.+...++.+|.+|+||||+|++.|+.++|++||+ .|+|+|.+ +||++|+..+
T Consensus 242 ~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~-~GAd~n~~-----~~L~~A~~~~--- 312 (337)
T 4g8k_A 242 PLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCK-RGASTDCG-----DLVMTARRNY--- 312 (337)
T ss_dssp HHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHT-TSCSSTTC-----CHHHHHHHTT---
T ss_pred HHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCC-----CHHHHHHHcC---
Confidence 55555555555555555543222244455555555555555555555555554 24444332 3555555544
Q ss_pred hhHHHHHHHHhcCcc
Q 007741 349 EASEIKDCLARCGAV 363 (591)
Q Consensus 349 ~~~~i~~~L~~~ga~ 363 (591)
+.+++++|+++||+
T Consensus 313 -~~~iv~~Ll~~GA~ 326 (337)
T 4g8k_A 313 -DHSLVKVLLSHGAK 326 (337)
T ss_dssp -CHHHHHHHHHTTCC
T ss_pred -CHHHHHHHHHCcCC
Confidence 44455555555544
No 5
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.9e-40 Score=328.83 Aligned_cols=267 Identities=23% Similarity=0.281 Sum_probs=206.4
Q ss_pred CCCCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccCCCCCcHHHHHHHhCcHHHHHHHHh
Q 007741 71 GRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELLK 150 (591)
Q Consensus 71 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~ 150 (591)
...|.|+||+|+..|+.+.+..++...+...... .+....++..|..|.||||+|+..|+.++|++|++
T Consensus 12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~-----------~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~ 80 (285)
T 3d9h_A 12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGI-----------RLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLIS 80 (285)
T ss_dssp ------------------------------CCSE-----------ECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHH
T ss_pred chHHHHHHHHHhhcCCCCCcccCCCCccccccch-----------hhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHH
Confidence 4578899999999999888888765432110000 00022357789999999999999999999999999
Q ss_pred cCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCC
Q 007741 151 YSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRS 230 (591)
Q Consensus 151 ~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~ 230 (591)
.+.+ ++..|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|++++.. ++. +.
T Consensus 81 ~g~~--~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~-~~ 155 (285)
T 3d9h_A 81 QGWA--VNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGSWDCVNLLLQHGAS-VQP-ES 155 (285)
T ss_dssp TTCC--SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SSC-SC
T ss_pred CCCC--CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCC-CCC-CC
Confidence 8754 6778999999999999999999999999999987 67788999999999999999999999998543 333 45
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHc
Q 007741 231 NGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRK 310 (591)
Q Consensus 231 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~ 310 (591)
+|.||||+|+..|+.+++++|++.++++ +..|..|+||||+|+..|+.+++++|++.|++ ++ .|..|+||||+|+..
T Consensus 156 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~-~~~~g~t~L~~A~~~ 232 (285)
T 3d9h_A 156 DLASPIHEAARRGHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQQRACVKKLLESGAD-VN-QGKGQDSPLHAVVRT 232 (285)
T ss_dssp TTSCHHHHHHHHTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCC-TT-CCBTTBCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCC-CC-CCCCCCCHHHHHHHc
Confidence 6999999999999999999999999998 67799999999999999999999999999998 55 488999999999999
Q ss_pred CcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhc-Ccc
Q 007741 311 KRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARC-GAV 363 (591)
Q Consensus 311 g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~-ga~ 363 (591)
|+.+++++|++. |+|++.+|..|+||||+|.. ..+++++|+++ |+.
T Consensus 233 ~~~~~v~~Ll~~-gad~~~~d~~g~t~l~~A~~------~~~~~~~Ll~~~~a~ 279 (285)
T 3d9h_A 233 ASEELACLLMDF-GADTQAKNAEGKRPVELVPP------ESPLAQLFLEREGAS 279 (285)
T ss_dssp TCHHHHHHHHHT-TCCTTCCCTTSCCGGGGSCT------TSHHHHHHHHHC---
T ss_pred CCHHHHHHHHHC-CCCCCCcCCCCCCHHHHhcC------ccHHHHHHHHhhccC
Confidence 999999999994 99999999999999999983 45788888887 543
No 6
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.2e-39 Score=334.85 Aligned_cols=271 Identities=27% Similarity=0.293 Sum_probs=178.7
Q ss_pred ccCCCCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccCCCCCcHHHHHHHhCcHHHHHHH
Q 007741 69 VTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNEL 148 (591)
Q Consensus 69 ~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~L 148 (591)
..+..+.++||.||+.|+.+.++.++... +..++..|..|.||||+|+..|+.++|++|
T Consensus 19 ~~~~~~~~~L~~A~~~g~~~~v~~ll~~~---------------------~~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 77 (351)
T 3utm_A 19 LTGEYKKDELLEAARSGNEEKLMALLTPL---------------------NVNCHASDGRKSTPLHLAAGYNRVRIVQLL 77 (351)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHCCTT---------------------TTTCCCSSTTCCCHHHHHHHTTCHHHHHHH
T ss_pred eeccccchhHHHHHHcCCHHHHHHHHHhc---------------------CCCcccCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 34556779999999999999999999753 556788899999999999999999999999
Q ss_pred HhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceec
Q 007741 149 LKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEIS 228 (591)
Q Consensus 149 l~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~ 228 (591)
+++|.+ ++..|..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++++ ...+..
T Consensus 78 l~~g~~--~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~ 153 (351)
T 3utm_A 78 LQHGAD--VHAKDKGGLVPLHNACSYGHYEVTELLLKHGACV-NAMDLWQFTPLHEAASKNRVEVCSLLLSHG-ADPTLV 153 (351)
T ss_dssp HHTTCC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC
T ss_pred HHcCCC--CCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCccc
Confidence 998755 5778889999999999999999999999999998 567889999999999999999999999984 444555
Q ss_pred CCCCCcHHHHH---------------------HHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhC---CCHHHHHH
Q 007741 229 RSNGKNALHFA---------------------ARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKG---QSCEVVKL 284 (591)
Q Consensus 229 ~~~g~tpLh~A---------------------~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~---~~~~~v~~ 284 (591)
+..|.+|++.| +..++.+.+..++...... ...+..|.||||+|+.. ++.+++++
T Consensus 154 ~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~t~L~~A~~~~~~~~~~~~~~ 232 (351)
T 3utm_A 154 NCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIIN-FKQPQSHETALHCAVASLHPKRKQVAEL 232 (351)
T ss_dssp CTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTT-CCCTTTCCCHHHHHHHCCSTTHHHHHHH
T ss_pred cCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhccc-ccCCCCCCCHHHHHHHHhCccHHHHHHH
Confidence 55554444332 2233333333333332221 22334444444444444 23444444
Q ss_pred HHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCccc
Q 007741 285 LLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVR 364 (591)
Q Consensus 285 Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~ 364 (591)
|++.|++ ++.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..+ +.+++++|+++|++.
T Consensus 233 Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~n~~d~~g~t~L~~A~~~~----~~~~v~~Ll~~gad~ 306 (351)
T 3utm_A 233 LLRKGAN-VNEKNKDFMTPLHVAAERAHNDVMEVLHK-HGAKMNALDSLGQTALHRAALAG----HLQTCRLLLSYGSDP 306 (351)
T ss_dssp HHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHT----CHHHHHHHHHTTCCT
T ss_pred HHHcCCC-cCCcCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcC----cHHHHHHHHHcCCCC
Confidence 4444444 44444444444444444444444444444 24444444444444444444444 444444444444444
Q ss_pred ccccCCc
Q 007741 365 ANELNQP 371 (591)
Q Consensus 365 ~~~~~~~ 371 (591)
.......
T Consensus 307 ~~~~~~g 313 (351)
T 3utm_A 307 SIISLQG 313 (351)
T ss_dssp TCCCTTS
T ss_pred CCcCCCC
Confidence 4333333
No 7
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=4.4e-40 Score=324.80 Aligned_cols=242 Identities=22% Similarity=0.264 Sum_probs=218.3
Q ss_pred CCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccCCCCCcHHHHHHHhCcHHHHHHHHhcC
Q 007741 73 HNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELLKYS 152 (591)
Q Consensus 73 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~ 152 (591)
+|.||||.|+..|+.+++++|++. +..++..|..|.||||+|+..|+.+++++|+++|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~----------------------g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 59 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQ----------------------GWAVNIITADHVSPLHEACLGGHLSCVKILLKHG 59 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT----------------------TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHC----------------------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 588999999999999999999986 6678899999999999999999999999999987
Q ss_pred CCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCC
Q 007741 153 TKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNG 232 (591)
Q Consensus 153 ~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g 232 (591)
++ ++..|..|.||||+|+..|+.+++++|+++|+++. .+..|.||||+|+..|+.+++++|+++ +.+++..|..|
T Consensus 60 ~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g 134 (261)
T 2xai_A 60 AQ--VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ--PESDLASPIHEAARRGHVECVNSLIAY-GGNIDHKISHL 134 (261)
T ss_dssp CC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS--CSCTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBTTT
T ss_pred CC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCcCCCCC
Confidence 54 57788999999999999999999999999999874 345699999999999999999999998 56678889999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCc
Q 007741 233 KNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKR 312 (591)
Q Consensus 233 ~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~ 312 (591)
.||||+|+..|+.+++++|++.|+++. . |..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..+
T Consensus 135 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~tpl~~A~~~~- 210 (261)
T 2xai_A 135 GTPLYLACENQQRACVKKLLESGADVN-Q-GKGQDSPLHAVARTASEELACLLMDFGAD-TQAKNAEGKRPVELVPPES- 210 (261)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHHTCCTT-C-CBTTBCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCGGGGSCTTC-
T ss_pred CCHHHHHHHhCCHHHHHHHHHcCCCCC-C-CCCCCChHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCChhhhccccc-
Confidence 999999999999999999999999984 3 88999999999999999999999999998 8999999999999999665
Q ss_pred HHHHHHHhcCCC-------CCcccccCCCCCHHHHHhhCCC
Q 007741 313 TEIVTELLSLPD-------TNVNALTRDHKTALDIAEGLPS 346 (591)
Q Consensus 313 ~~iv~~Ll~~~g-------~d~~~~d~~G~t~L~~A~~~~~ 346 (591)
+++++|++..+ ++++.+|..|+||+|+|.+...
T Consensus 211 -~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~ 250 (261)
T 2xai_A 211 -PLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVL 250 (261)
T ss_dssp -THHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSSS
T ss_pred -cHHHHHHhccCCccHHHHHHHHHHHHhchhccccCcccCC
Confidence 48888988533 3577899999999999998773
No 8
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2.2e-40 Score=344.46 Aligned_cols=264 Identities=23% Similarity=0.275 Sum_probs=227.7
Q ss_pred hccCCCCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccC-CCCCcHHHHHHHhCcHHHHH
Q 007741 68 QVTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVN-ELGETALFTAADKGHIEVVN 146 (591)
Q Consensus 68 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n-~~g~TpL~~Aa~~g~~~~v~ 146 (591)
...+..|.||||.|+..|+ ++++.|+ ...++..| ..|.||||+|+..|+.++++
T Consensus 88 ~~~~~~g~t~L~~Aa~~~~-~~~~~L~------------------------~~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~ 142 (373)
T 2fo1_E 88 TEPEPESPIKLHTEAAGSY-AITEPIT------------------------RESVNIIDPRHNRTVLHWIASNSSAEKSE 142 (373)
T ss_dssp ------CCCHHHHHHHSSS-CCCSCCS------------------------TTTTTTCCCSSCCCHHHHHHCTTCCSCCT
T ss_pred cCCCCCCccHHHHHhcCCc-hHHHHhc------------------------cccccccCCcCCCCHHHHHHHCCCHHHHH
Confidence 3567889999999999554 5665554 23467777 78999999999999999888
Q ss_pred HHH--------hcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 007741 147 ELL--------KYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELL 218 (591)
Q Consensus 147 ~Ll--------~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL 218 (591)
+|+ +.|. +++..|..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|+
T Consensus 143 ~Ll~~~~~~ll~~ga--~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll 219 (373)
T 2fo1_E 143 DLIVHEAKECIAAGA--DVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADP-TIYNKSERSALHQAAANRDFGMMVYML 219 (373)
T ss_dssp THHHHHHHHHHHTCC--CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCHHHHHHHT
T ss_pred HHHHHHHHHHHhcCC--CCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCC-cccCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 887 5554 46778999999999999999999999999999998 577889999999999999999999999
Q ss_pred hcCC--CcceecCCCCCcHHHHHHHcC---CHHHHHHHHhcCccccc-------ccCCCCCcHHHHHHhCCCHHHHHHHH
Q 007741 219 SKDG--GLLEISRSNGKNALHFAARQG---HVDVVKALLSKDPQLAR-------RTDKKGQTALHMAVKGQSCEVVKLLL 286 (591)
Q Consensus 219 ~~~~--~~~~~~~~~g~tpLh~A~~~g---~~~~v~~Ll~~~~~~~~-------~~d~~g~t~Lh~A~~~~~~~~v~~Ll 286 (591)
+++. ..++..|.+|.||||+|+..+ +.+++++|++.|+++.. ..|..|+||||+|+..|+.+++++|+
T Consensus 220 ~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll 299 (373)
T 2fo1_E 220 NSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLV 299 (373)
T ss_dssp TSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHH
T ss_pred hcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHH
Confidence 8742 456778999999999999998 89999999999988732 25779999999999999999999999
Q ss_pred HcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCccc
Q 007741 287 EADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVR 364 (591)
Q Consensus 287 ~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~ 364 (591)
+.+...++.+|..|+||||+|+..|+.+++++|+++ |++++.+|..|+||||+|+..+ +.+++++|.++++.+
T Consensus 300 ~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~-gad~~~~d~~g~t~l~~A~~~g----~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 300 GEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQ-GASVEAVDATDHTARQLAQANN----HHNIVDIFDRCRPER 372 (373)
T ss_dssp HHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSSCCCSSSCCHHHHHHHTT----CHHHHHHHHTTC---
T ss_pred HhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccCCCCCCCCHHHHHHHcC----CHHHHHHHHhcCccc
Confidence 987444899999999999999999999999999994 9999999999999999999999 899999999998753
No 9
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=3.5e-39 Score=316.79 Aligned_cols=232 Identities=22% Similarity=0.250 Sum_probs=183.5
Q ss_pred ccccCCCCCcHHHHHHHhC-------------cHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCC
Q 007741 122 VNEVNELGETALFTAADKG-------------HIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDP 188 (591)
Q Consensus 122 ~~~~n~~g~TpL~~Aa~~g-------------~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~ 188 (591)
+|.+|.+|.||||+|+..| +.+++++|++.+.+.+ ...|..|.||||+|+..|+.+++++|+++|+
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 81 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLH-NQTDRTGETALHLAARYSRSDAAKRLLEASA 81 (253)
T ss_dssp --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcc-cccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 6788999999999999988 8999999999876532 4468899999999999999999999999999
Q ss_pred CCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCc
Q 007741 189 SLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQT 268 (591)
Q Consensus 189 ~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t 268 (591)
++ +..+..|.||||+|+..|+.+++++|++++...++..+..|.||||+|+..|+.+++++|++.|+++ +..|..|+|
T Consensus 82 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t 159 (253)
T 1yyh_A 82 DA-NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKS 159 (253)
T ss_dssp CT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCT-TCBCTTSCB
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCC-CCcCCCCCC
Confidence 98 6678899999999999999999999999977788889999999999999999999999999999998 677999999
Q ss_pred HHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCCh
Q 007741 269 ALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSE 348 (591)
Q Consensus 269 ~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~ 348 (591)
|||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++ |++++.+|..|+||+|+|++.+
T Consensus 160 ~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~g--- 234 (253)
T 1yyh_A 160 ALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLDH-FANRDITDHMDRLPRDIAQERM--- 234 (253)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTT---
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCccccccCCCCHHHHHHHcC---
Confidence 99999999999999999999998 889999999999999999999999999995 9999999999999999999999
Q ss_pred hhHHHHHHHHhcCc
Q 007741 349 EASEIKDCLARCGA 362 (591)
Q Consensus 349 ~~~~i~~~L~~~ga 362 (591)
+.+|+++|.....
T Consensus 235 -~~~i~~~l~~~~~ 247 (253)
T 1yyh_A 235 -HHDIVRLLDLEHH 247 (253)
T ss_dssp -CHHHHHHHHC---
T ss_pred -CHHHHHHHHHHhh
Confidence 8999998876543
No 10
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.2e-39 Score=337.83 Aligned_cols=263 Identities=18% Similarity=0.176 Sum_probs=227.2
Q ss_pred hhccCCCCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccCCCCCcHHHHHHHhCcHHHHH
Q 007741 67 KQVTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVN 146 (591)
Q Consensus 67 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~TpL~~Aa~~g~~~~v~ 146 (591)
....|.+|.||||+||..|+.++|++|++. +..++..|..|.||||+|+..|+.++|+
T Consensus 13 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~----------------------g~~~~~~d~~g~t~L~~A~~~g~~~~v~ 70 (364)
T 3ljn_A 13 RIKSDDENMEKIHVAARKGQTDEVRRLIET----------------------GVSPTIQNRFGCTALHLACKFGCVDTAK 70 (364)
T ss_dssp ---CCHHHHHHHHHHHHHTCHHHHHHHHHT----------------------TCCTTCCCTTCCCHHHHHHHHCCHHHHH
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHc----------------------CCCccccCCCCCcHHHHHHHcCCHHHHH
Confidence 344577888999999999999999999986 6678899999999999999999999999
Q ss_pred HHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhC----CCCCcc----------------cCCCCCCCHHHHHH
Q 007741 147 ELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDH----DPSLSQ----------------TTGPSNATPLVSAA 206 (591)
Q Consensus 147 ~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~----~~~~~~----------------~~~~~g~tpL~~A~ 206 (591)
+|+++++. ..+..|.||||+|+..|+.+++++|+++ +.++.. ..+..|.||||+|+
T Consensus 71 ~Ll~~g~~----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 146 (364)
T 3ljn_A 71 YLASVGEV----HSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCV 146 (364)
T ss_dssp HHHHHCCC----CCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHH
T ss_pred HHHHCCCC----ccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHH
Confidence 99998863 2335799999999999999999999998 655421 16678999999999
Q ss_pred HcC--CHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcc-----cccccCCCCCcHHHHHHhCCCH
Q 007741 207 TRG--HTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQ-----LARRTDKKGQTALHMAVKGQSC 279 (591)
Q Consensus 207 ~~g--~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~-----~~~~~d~~g~t~Lh~A~~~~~~ 279 (591)
..| +.+++++|+++ +.+++..|..|.||||+|+..|+.+++++|++.+++ + +..|..|+||||+|+..|+.
T Consensus 147 ~~g~~~~~~v~~Ll~~-ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~~~~~~g~t~L~~A~~~g~~ 224 (364)
T 3ljn_A 147 GLGPEYLEMIKILVQL-GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRL-DYANKQGNSHLHWAILINWE 224 (364)
T ss_dssp HSCGGGHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCT-TCCCTTCCCTTHHHHTTTCH
T ss_pred HcCCchHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccc-cccCCCCCcHHHHHHHcCCH
Confidence 999 99999999999 667788899999999999999999999999999988 5 77799999999999999999
Q ss_pred HHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCccc------------ccCCCCCHHHHHhhCCCC
Q 007741 280 EVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNA------------LTRDHKTALDIAEGLPSS 347 (591)
Q Consensus 280 ~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~------------~d~~G~t~L~~A~~~~~~ 347 (591)
+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++ |++++. .+..|.||++.|+..+
T Consensus 225 ~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~-- 300 (364)
T 3ljn_A 225 DVAMRFVEMGID-VNMEDNEHTVPLYLSVRAAMVLLTKELLQK-TDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADP-- 300 (364)
T ss_dssp HHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTCCHHHHHHHHHH-SCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCH--
T ss_pred HHHHHHHHcCCC-CCCCCCCCCCHHHHHHHhChHHHHHHHHHc-CCchhhhcCcccCcccccccccccccchhhhhcc--
Confidence 999999999998 899999999999999999999999999995 665433 5678889998888776
Q ss_pred hhhHHHHHHHHhcCcc
Q 007741 348 EEASEIKDCLARCGAV 363 (591)
Q Consensus 348 ~~~~~i~~~L~~~ga~ 363 (591)
..+.+..|+..+.+
T Consensus 301 --~~~~v~~ll~~~~~ 314 (364)
T 3ljn_A 301 --SKQEVLQLLQEKLD 314 (364)
T ss_dssp --HHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHH
Confidence 45555445544443
No 11
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=4.7e-38 Score=305.15 Aligned_cols=231 Identities=25% Similarity=0.340 Sum_probs=211.2
Q ss_pred ccccCCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCH
Q 007741 122 VNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATP 201 (591)
Q Consensus 122 ~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tp 201 (591)
++..|..|.||||+|+..|+.+++++|+++|.+ ++..+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~ 80 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGAN--IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGSTC 80 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSCCH
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCC--cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCcH
Confidence 677899999999999999999999999998754 5678889999999999999999999999999987 5678899999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHH
Q 007741 202 LVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEV 281 (591)
Q Consensus 202 L~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~ 281 (591)
||+|+..|+.+++++|+++++..++..+..|.||||+|+..|+.+++++|++.|+++ +..|..|.||||+|+..|+.++
T Consensus 81 L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~ 159 (237)
T 3b7b_A 81 LHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDI-NIRDNEENICLHWAAFSGCVDI 159 (237)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHCCHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CccCCCCCCHHHHHHHCCCHHH
Confidence 999999999999999999977788888999999999999999999999999999998 6779999999999999999999
Q ss_pred HHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHH
Q 007741 282 VKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLA 358 (591)
Q Consensus 282 v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~ 358 (591)
+++|++.|++ ++.+|..|+||||+|++.|+.+++++|+++ |++++.+|..|+||||+|+..+......++.+.|.
T Consensus 160 ~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~~l~ 234 (237)
T 3b7b_A 160 AEILLAAKCD-LHAVNIHGDSPLHIAARENRYDCVVLFLSR-DSDVTLKNKEGETPLQCASLNSQVWSALQMSKALQ 234 (237)
T ss_dssp HHHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCC-CCCcCCCCCCHHHHHHHhCCHhHHHHHHHc-CCCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999998 888999999999999999999999999994 99999999999999999999884333334444443
No 12
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=7.5e-39 Score=318.90 Aligned_cols=255 Identities=23% Similarity=0.216 Sum_probs=192.5
Q ss_pred hccCCCCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccCCCCCcHHHHHHHhCcHHHHHH
Q 007741 68 QVTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNE 147 (591)
Q Consensus 68 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~ 147 (591)
...|.+|.||||+|++.|+.+++++|++.... ...++.+|..|.||||+|+..|+.++|++
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-------------------~~~~~~~~~~g~t~L~~A~~~g~~~~v~~ 63 (282)
T 1oy3_D 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAG-------------------HEYLDLQNDLGQTALHLAAILGEASTVEK 63 (282)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTT-------------------SGGGGCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHhcCCC-------------------cccccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 34688999999999999999999999975210 22378899999999999999999999999
Q ss_pred HHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcc------------cCCCCCCCHHHHHHHcCCHHHHH
Q 007741 148 LLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQ------------TTGPSNATPLVSAATRGHTAVVN 215 (591)
Q Consensus 148 Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~------------~~~~~g~tpL~~A~~~g~~~~v~ 215 (591)
|+++|++ ++..+..|.||||+|+..|+.+++++|++++++... .....+.++++.++..+......
T Consensus 64 Ll~~ga~--~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (282)
T 1oy3_D 64 LYAAGAG--VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEE 141 (282)
T ss_dssp HHHTTCC--SSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC---------------------------------
T ss_pred HHHcCCC--CCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhh
Confidence 9998765 567888999999999999999999999999876422 12234567777777766665555
Q ss_pred HHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccC
Q 007741 216 ELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVML 295 (591)
Q Consensus 216 ~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~ 295 (591)
.++...+..++..+..|.||||+|+..|+.+++++|+++|+++....+..|+||||+|+..|+.+++++|+++|++ ++.
T Consensus 142 ~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad-~~~ 220 (282)
T 1oy3_D 142 PRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD-PTA 220 (282)
T ss_dssp --CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTC
T ss_pred hhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-Ccc
Confidence 5555556667788999999999999999999999999999998544335699999999999999999999999998 899
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCC
Q 007741 296 PDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLP 345 (591)
Q Consensus 296 ~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~ 345 (591)
+|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||+++|....
T Consensus 221 ~d~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 221 RMYGGRTPLGSALLRPNPILARLLRA-HGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp CCTTSCCHHHHHHTSSCHHHHHHHHH-TTCCCCCCC--------------
T ss_pred cccCCCCHHHHHHHcCCcHHHHHHHH-cCCCcCcCCCcccccccccCCcc
Confidence 99999999999999999999999999 59999999999999999998654
No 13
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=3.5e-38 Score=306.63 Aligned_cols=234 Identities=24% Similarity=0.275 Sum_probs=204.2
Q ss_pred ccccCCCCCcHHHHHHHhCcHHHHHHHHhc--CCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCC
Q 007741 122 VNEVNELGETALFTAADKGHIEVVNELLKY--STKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNA 199 (591)
Q Consensus 122 ~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~--~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~ 199 (591)
++.+|.+|.||||+|+..|+.+++++|++. ..+.+++..|..|.||||+|+..|+.+++++|+++|+++ ...+..|.
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~ 80 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQ 80 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCC
Confidence 467799999999999999999999999972 123456778899999999999999999999999999987 56788999
Q ss_pred CHHHHHHHcCCHHHHHHHHhcCCC---cceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhC
Q 007741 200 TPLVSAATRGHTAVVNELLSKDGG---LLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKG 276 (591)
Q Consensus 200 tpL~~A~~~g~~~~v~~LL~~~~~---~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 276 (591)
||||+|+..|+.+++++|++.+.. .++..+..|.||||+|+..|+.+++++|++.++++....+..|.||||+|+..
T Consensus 81 t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~ 160 (241)
T 1k1a_A 81 TAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVEN 160 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHc
Confidence 999999999999999999998642 56778899999999999999999999999999998444338899999999999
Q ss_pred CCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHH
Q 007741 277 QSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDC 356 (591)
Q Consensus 277 ~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~ 356 (591)
|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..+ ..++++.
T Consensus 161 ~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~----~~~i~~~ 234 (241)
T 1k1a_A 161 NSLSMVQLLLQHGAN-VNAQMYSGSSALHSASGRGLLPLVRTLVR-SGADSSLKNCHNDTPLMVARSRR----VIDILRG 234 (241)
T ss_dssp TCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCTTTTCSSHH----HHHHHTC
T ss_pred CCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCCcCCCCCCHHHHHHhcC----cHHHHhh
Confidence 999999999999998 88999999999999999999999999999 59999999999999999999877 8888887
Q ss_pred HHhcCc
Q 007741 357 LARCGA 362 (591)
Q Consensus 357 L~~~ga 362 (591)
|.+.++
T Consensus 235 l~~~~a 240 (241)
T 1k1a_A 235 KATRPA 240 (241)
T ss_dssp ------
T ss_pred hccCCC
Confidence 776553
No 14
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=5e-38 Score=308.51 Aligned_cols=228 Identities=25% Similarity=0.332 Sum_probs=181.3
Q ss_pred hccCCCCCcHhHHHHHcC-------------CHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccc-cccCCCCCcHH
Q 007741 68 QVTGRHNDTELHLAAQRG-------------DLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVV-NEVNELGETAL 133 (591)
Q Consensus 68 ~~~~~~g~t~Lh~Aa~~g-------------~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~n~~g~TpL 133 (591)
+.+|.+|.||||.|+..| +.++++.|++. +..+ +..|..|.|||
T Consensus 4 n~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~----------------------g~~~~~~~d~~g~t~L 61 (253)
T 1yyh_A 4 NVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQ----------------------GASLHNQTDRTGETAL 61 (253)
T ss_dssp ----------------------------------------------------------------------CCCTTSCCHH
T ss_pred CCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHc----------------------cCCcccccCCCCCcHH
Confidence 456889999999999988 89999999976 3334 45689999999
Q ss_pred HHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHH
Q 007741 134 FTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAV 213 (591)
Q Consensus 134 ~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~ 213 (591)
|+|+..|+.++|++|+++|.+ ++..|..|.||||+|+..|+.+++++|+++++......+..|.||||+|+..|+.++
T Consensus 62 ~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 139 (253)
T 1yyh_A 62 HLAARYSRSDAAKRLLEASAD--ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGM 139 (253)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSH
T ss_pred HHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHH
Confidence 999999999999999998755 567889999999999999999999999999985557788999999999999999999
Q ss_pred HHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccc
Q 007741 214 VNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIV 293 (591)
Q Consensus 214 v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~ 293 (591)
+++|+++ +.+++..|..|.||||+|+..|+.+++++|++.|+++ +..|..|+||||+|+..|+.+++++|+++|++ +
T Consensus 140 v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~ 216 (253)
T 1yyh_A 140 LEDLINS-HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANK-DMQNNREETPLFLAAREGSYETAKVLLDHFAN-R 216 (253)
T ss_dssp HHHHHHT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-T
T ss_pred HHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-c
Confidence 9999997 5667888999999999999999999999999999998 67799999999999999999999999999998 8
Q ss_pred cCCCCCCCcHHHHHHHcCcHHHHHHHhcC
Q 007741 294 MLPDKFGNTALHVATRKKRTEIVTELLSL 322 (591)
Q Consensus 294 ~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~ 322 (591)
+.+|..|+||||+|+++|+.+++++|...
T Consensus 217 ~~~d~~g~tpl~~A~~~g~~~i~~~l~~~ 245 (253)
T 1yyh_A 217 DITDHMDRLPRDIAQERMHHDIVRLLDLE 245 (253)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHC-
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 89999999999999999999999999875
No 15
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.4e-37 Score=306.04 Aligned_cols=235 Identities=24% Similarity=0.267 Sum_probs=217.2
Q ss_pred CCCCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccCCCCCcHHHHHHHhCcHHHHHHHHh
Q 007741 71 GRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELLK 150 (591)
Q Consensus 71 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~ 150 (591)
+..|.||||.|+..|+.+++++|++. +..++..|..|.||||+|+..|+.+++++|++
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 93 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRH----------------------GADPVLRKKNGATPFLLAAIAGSVKLLKLFLS 93 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHT----------------------TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHc----------------------CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 67789999999999999999999986 66678889999999999999999999999999
Q ss_pred cCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccC---------CCCCCCHHHHHHHcCCHHHHHHHHhcC
Q 007741 151 YSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTT---------GPSNATPLVSAATRGHTAVVNELLSKD 221 (591)
Q Consensus 151 ~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~---------~~~g~tpL~~A~~~g~~~~v~~LL~~~ 221 (591)
++.+ ++..+..|.||||+|+..|+.+++++|+++++++.... +..|.||||+|+..|+.+++++|+++.
T Consensus 94 ~g~~--~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 171 (285)
T 1wdy_A 94 KGAD--VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEM 171 (285)
T ss_dssp TTCC--TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTS
T ss_pred cCCC--CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhc
Confidence 8755 56788899999999999999999999999999874332 678999999999999999999999987
Q ss_pred CCcceecCCCCCcHHHHHHHcCC----HHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHH-cCcccccCC
Q 007741 222 GGLLEISRSNGKNALHFAARQGH----VDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLE-ADAAIVMLP 296 (591)
Q Consensus 222 ~~~~~~~~~~g~tpLh~A~~~g~----~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~-~~~~~~~~~ 296 (591)
+..++..|..|.||||+|+..++ .+++++|++.|+++ +..|..|+||||+|+..|+.+++++|++ .|.+ ++.+
T Consensus 172 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~ 249 (285)
T 1wdy_A 172 GADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV-NVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE-INDT 249 (285)
T ss_dssp CCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCS-SCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCC-TTCC
T ss_pred CCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCC-cccc
Confidence 77888899999999999999999 99999999999998 6779999999999999999999999999 6766 8999
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccC
Q 007741 297 DKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTR 332 (591)
Q Consensus 297 d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~ 332 (591)
|..|+||||+|++.|+.+++++|++ .|++++.+|.
T Consensus 250 ~~~g~t~l~~A~~~~~~~i~~~Ll~-~Ga~~~~~d~ 284 (285)
T 1wdy_A 250 DSDGKTALLLAVELKLKKIAELLCK-RGASTDCGDL 284 (285)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHH-HSSCSCCSSC
T ss_pred CCCCCcHHHHHHHcCcHHHHHHHHH-cCCCCCcccc
Confidence 9999999999999999999999999 5999998874
No 16
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=6.6e-37 Score=297.04 Aligned_cols=227 Identities=28% Similarity=0.402 Sum_probs=208.4
Q ss_pred hccCCCCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccCCCCCcHHHHHHHhCcHHHHHH
Q 007741 68 QVTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNE 147 (591)
Q Consensus 68 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~ 147 (591)
+..+.+|.||||.|+..|+.+++++|++. +..++..|..|.||||+|+..|+.+++++
T Consensus 5 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 62 (237)
T 3b7b_A 5 KMEHQNKRSPLHAAAEAGHVDICHMLVQA----------------------GANIDTCSEDQRTPLMEAAENNHLEAVKY 62 (237)
T ss_dssp CCSSCCSCCHHHHHHHHTCHHHHHHHHHT----------------------TCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred ccccCCCCCHHHHHHHcCcHHHHHHHHHc----------------------CCCcCccCCCCCCHHHHHHHhCCHHHHHH
Confidence 45688999999999999999999999986 66688889999999999999999999999
Q ss_pred HHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCccee
Q 007741 148 LLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEI 227 (591)
Q Consensus 148 Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~ 227 (591)
|++++.. ++..+..|.||||+|+..|+.+++++|+++++...+..+..|.||||+|+..|+.+++++|+++ +..++.
T Consensus 63 Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~ 139 (237)
T 3b7b_A 63 LIKAGAL--VDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSK-GSDINI 139 (237)
T ss_dssp HHTTTCC--CCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTC
T ss_pred HHhCCCC--CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCc
Confidence 9998755 5677889999999999999999999999999655577888999999999999999999999998 556778
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHH
Q 007741 228 SRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVA 307 (591)
Q Consensus 228 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A 307 (591)
.+..|.||||+|+..|+.+++++|++.++++ +..|..|.||||+|+..++.+++++|+++|++ ++.+|.+|+||||+|
T Consensus 140 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~t~l~~A 217 (237)
T 3b7b_A 140 RDNEENICLHWAAFSGCVDIAEILLAAKCDL-HAVNIHGDSPLHIAARENRYDCVVLFLSRDSD-VTLKNKEGETPLQCA 217 (237)
T ss_dssp CCTTSCCHHHHHHHHCCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHS
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCC-CCccCCCCCCHHHHH
Confidence 8999999999999999999999999999998 66799999999999999999999999999998 889999999999999
Q ss_pred HHcCcHHHHHHHhc
Q 007741 308 TRKKRTEIVTELLS 321 (591)
Q Consensus 308 ~~~g~~~iv~~Ll~ 321 (591)
+..|+.+.+..+++
T Consensus 218 ~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 218 SLNSQVWSALQMSK 231 (237)
T ss_dssp CTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999976666654
No 17
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.3e-37 Score=302.65 Aligned_cols=230 Identities=22% Similarity=0.268 Sum_probs=203.1
Q ss_pred ccCCCCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccCCCCCcHHHHHHHhCcHHHHHHH
Q 007741 69 VTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNEL 148 (591)
Q Consensus 69 ~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~L 148 (591)
..|.+|.||||.|+..|+.+++++|++... ..+..++..|..|.||||+|+..|+.+++++|
T Consensus 4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~------------------~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 65 (241)
T 1k1a_A 4 RADEDGDTPLHIAVVQGNLPAVHRLVNLFQ------------------QGGRELDIYNNLRQTPLHLAVITTLPSVVRLL 65 (241)
T ss_dssp ---CTTCCHHHHHHHTTCHHHHHHHHHHHH------------------HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHHHH------------------hcCCCCCcccccCCCHHHHHHHcCCHHHHHHH
Confidence 468899999999999999999999996210 01567888999999999999999999999999
Q ss_pred HhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCC----CCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCc
Q 007741 149 LKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDP----SLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGL 224 (591)
Q Consensus 149 l~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~----~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~ 224 (591)
+++|.+ ++..+..|.||||+|+..|+.+++++|++.++ ++ ...+..|.||||+|+..|+.+++++|++++ .+
T Consensus 66 l~~g~~--~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~ 141 (241)
T 1k1a_A 66 VTAGAS--PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDL-EARNYDGLTALHVAVNTECQETVQLLLERG-AD 141 (241)
T ss_dssp HHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CC
T ss_pred HHcCCC--ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc-cccCcCCCcHHHHHHHcCCHHHHHHHHHcC-CC
Confidence 998755 56778899999999999999999999999987 44 567889999999999999999999999985 44
Q ss_pred ceecC-CCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcH
Q 007741 225 LEISR-SNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTA 303 (591)
Q Consensus 225 ~~~~~-~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~ 303 (591)
++..+ ..|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||
T Consensus 142 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tp 219 (241)
T 1k1a_A 142 IDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANV-NAQMYSGSSALHSASGRGLLPLVRTLVRSGAD-SSLKNCHNDTP 219 (241)
T ss_dssp TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCT
T ss_pred cccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCC-CCCcCCCCCCH
Confidence 55555 78999999999999999999999999998 67799999999999999999999999999998 88999999999
Q ss_pred HHHHHHcCcHHHHHHHhcC
Q 007741 304 LHVATRKKRTEIVTELLSL 322 (591)
Q Consensus 304 Lh~A~~~g~~~iv~~Ll~~ 322 (591)
||+|+..|+.++++.|++.
T Consensus 220 l~~A~~~~~~~i~~~l~~~ 238 (241)
T 1k1a_A 220 LMVARSRRVIDILRGKATR 238 (241)
T ss_dssp TTTCSSHHHHHHHTC----
T ss_pred HHHHHhcCcHHHHhhhccC
Confidence 9999999999999999874
No 18
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=6.1e-37 Score=296.07 Aligned_cols=228 Identities=25% Similarity=0.328 Sum_probs=211.0
Q ss_pred CCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHH
Q 007741 126 NELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSA 205 (591)
Q Consensus 126 n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A 205 (591)
+..+.||||.|+..|+.+.+++|++.+.. ..+..+..|.||||+|+..|+.+++++|+++++++ +..+..|.||||+|
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 80 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADKS-LATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIA 80 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCGG-GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhchh-hhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcCCCCCCHHHHH
Confidence 45688999999999999999999997543 35778889999999999999999999999999987 66788999999999
Q ss_pred HHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHH
Q 007741 206 ATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLL 285 (591)
Q Consensus 206 ~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~L 285 (591)
+..|+.+++++|+++ +..++..+..|.||||+|+..|+.+++++|++.+.++ +..|..|.||||+|+..|+.+++++|
T Consensus 81 ~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~L 158 (231)
T 3aji_A 81 ASAGXDEIVKALLVK-GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP-DAKDHYDATAMHRAAAKGNLKMVHIL 158 (231)
T ss_dssp HHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHcCHHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 999999999999998 5567788999999999999999999999999999998 67799999999999999999999999
Q ss_pred HHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCcc
Q 007741 286 LEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAV 363 (591)
Q Consensus 286 l~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~ 363 (591)
+++|++ ++.+|..|+||||+|+..|+.+++++|+++ |++++.+|..|+||+|+|...+ ..++.++|.++|+.
T Consensus 159 l~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~----~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 159 LFYKAS-TNIQDTEGNTPLHLACDEERVEEAKFLVTQ-GASIYIENKEEKTPLQVAKGGL----GLILKRLAEGEEAS 230 (231)
T ss_dssp HHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHSCHHH----HHHHHHHHHHHHHC
T ss_pred HhcCCC-ccccCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHhhH----HHHHHHHHcccccc
Confidence 999998 888999999999999999999999999995 9999999999999999998877 88999999988764
No 19
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=4.8e-37 Score=296.81 Aligned_cols=225 Identities=27% Similarity=0.353 Sum_probs=207.8
Q ss_pred CCCCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccCCCCCcHHHHHHHhCcHHHHHHHHh
Q 007741 71 GRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELLK 150 (591)
Q Consensus 71 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~ 150 (591)
+..+++|||.|++.|+.+.++.+++.. +...+..|..|.||||+|+..|+.+++++|++
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~---------------------~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 61 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILAD---------------------KSLATRTDQDSRTALHWACSAGHTEIVEFLLQ 61 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHC---------------------GGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhc---------------------hhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 456789999999999999999999753 44578889999999999999999999999999
Q ss_pred cCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCC
Q 007741 151 YSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRS 230 (591)
Q Consensus 151 ~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~ 230 (591)
++.+ ++..|..|.||||+|+..|+.+++++|+++++++ +..+..|.||||+|+..|+.+++++|+++ +..++..+.
T Consensus 62 ~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~ 137 (231)
T 3aji_A 62 LGVP--VNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHV-NAVNQNGCTPLHYAASKNRHEIAVMLLEG-GANPDAKDH 137 (231)
T ss_dssp TTCC--SCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCT
T ss_pred hCCC--CCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCC
Confidence 8754 5778889999999999999999999999999998 66788999999999999999999999988 556777899
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHc
Q 007741 231 NGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRK 310 (591)
Q Consensus 231 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~ 310 (591)
.|.||||+|+..|+.+++++|++.++++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..
T Consensus 138 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~ 215 (231)
T 3aji_A 138 YDATAMHRAAAKGNLKMVHILLFYKAST-NIQDTEGNTPLHLACDEERVEEAKFLVTQGAS-IYIENKEEKTPLQVAKGG 215 (231)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHSCHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCc-cccCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHhh
Confidence 9999999999999999999999999998 67799999999999999999999999999998 789999999999999999
Q ss_pred CcHHHHHHHhcC
Q 007741 311 KRTEIVTELLSL 322 (591)
Q Consensus 311 g~~~iv~~Ll~~ 322 (591)
++.+++++|+++
T Consensus 216 ~~~~i~~lL~~~ 227 (231)
T 3aji_A 216 LGLILKRLAEGE 227 (231)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHccc
Confidence 999999999873
No 20
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=300.71 Aligned_cols=221 Identities=24% Similarity=0.313 Sum_probs=199.3
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHH
Q 007741 128 LGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAAT 207 (591)
Q Consensus 128 ~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 207 (591)
+|.||||+|+..|+.+++++|++++.+ ++..|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 78 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWA--VNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACV 78 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC--SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC--CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHH
Confidence 589999999999999999999998754 6778899999999999999999999999999987 6778899999999999
Q ss_pred cCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHH
Q 007741 208 RGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLE 287 (591)
Q Consensus 208 ~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~ 287 (591)
.|+.+++++|++++.. .+ .+.+|.||||+|+..|+.+++++|++.|+++ +..|..|+||||+|+..|+.+++++|++
T Consensus 79 ~~~~~~v~~Ll~~g~~-~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 155 (261)
T 2xai_A 79 SGSWDCVNLLLQHGAS-VQ-PESDLASPIHEAARRGHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQQRACVKKLLE 155 (261)
T ss_dssp HTCHHHHHHHHHTTCC-SS-CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCC-CC-CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 9999999999998544 33 3566999999999999999999999999998 6779999999999999999999999999
Q ss_pred cCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCcc
Q 007741 288 ADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAV 363 (591)
Q Consensus 288 ~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~ 363 (591)
+|++ ++. |..|+||||+|+..|+.+++++|++. |+|++.+|..|+||+|+|...+ ++.++|.+.+..
T Consensus 156 ~g~~-~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~tpl~~A~~~~------~~~~~ll~~~~~ 222 (261)
T 2xai_A 156 SGAD-VNQ-GKGQDSPLHAVARTASEELACLLMDF-GADTQAKNAEGKRPVELVPPES------PLAQLFLEREGP 222 (261)
T ss_dssp HTCC-TTC-CBTTBCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCGGGGSCTTC------THHHHHHHC-CC
T ss_pred cCCC-CCC-CCCCCChHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCChhhhccccc------cHHHHHHhccCC
Confidence 9998 554 88999999999999999999999995 9999999999999999998544 478888887654
No 21
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.5e-37 Score=320.29 Aligned_cols=235 Identities=21% Similarity=0.243 Sum_probs=209.8
Q ss_pred cccccccCCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCC
Q 007741 119 SSVVNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSN 198 (591)
Q Consensus 119 ~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g 198 (591)
+...+..|..|.||||+||..|+.++|++|+++|.+ ++..|..|.||||+|+..|+.+++++|++++++.. +..|
T Consensus 10 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~--~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~g 84 (364)
T 3ljn_A 10 KLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVS--PTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHS---LWHG 84 (364)
T ss_dssp ------CCHHHHHHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCC---CBTT
T ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcc---ccCC
Confidence 455677899999999999999999999999998754 67789999999999999999999999999999653 3578
Q ss_pred CCHHHHHHHcCCHHHHHHHHhcC---CCccee-----------------cCCCCCcHHHHHHHcC--CHHHHHHHHhcCc
Q 007741 199 ATPLVSAATRGHTAVVNELLSKD---GGLLEI-----------------SRSNGKNALHFAARQG--HVDVVKALLSKDP 256 (591)
Q Consensus 199 ~tpL~~A~~~g~~~~v~~LL~~~---~~~~~~-----------------~~~~g~tpLh~A~~~g--~~~~v~~Ll~~~~ 256 (591)
.||||+|+..|+.+++++|+++. +...+. .|..|.||||+|+..| +.+++++|++.|+
T Consensus 85 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga 164 (364)
T 3ljn_A 85 QKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGA 164 (364)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCC
Confidence 99999999999999999999872 222333 7789999999999999 9999999999999
Q ss_pred ccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCccc----ccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccC
Q 007741 257 QLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAI----VMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTR 332 (591)
Q Consensus 257 ~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~----~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~ 332 (591)
++ +..|..|+||||+|+..|+.+++++|+++|++. ++.+|..|+||||+|+..|+.+++++|++ .|+|++.+|.
T Consensus 165 ~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~gad~~~~d~ 242 (364)
T 3ljn_A 165 SP-TAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVE-MGIDVNMEDN 242 (364)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHT-TTCCTTCCCT
T ss_pred CC-cccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCCCC
Confidence 98 677999999999999999999999999998763 78889999999999999999999999999 5999999999
Q ss_pred CCCCHHHHHhhCCCChhhHHHHHHHHhcCccc
Q 007741 333 DHKTALDIAEGLPSSEEASEIKDCLARCGAVR 364 (591)
Q Consensus 333 ~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~ 364 (591)
.|+||||+|+..+ +.+++++|++.|+..
T Consensus 243 ~g~tpL~~A~~~g----~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 243 EHTVPLYLSVRAA----MVLLTKELLQKTDVF 270 (364)
T ss_dssp TSCCHHHHHHHTC----CHHHHHHHHHHSCHH
T ss_pred CCCCHHHHHHHhC----hHHHHHHHHHcCCch
Confidence 9999999999999 899999999998764
No 22
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.7e-37 Score=306.53 Aligned_cols=229 Identities=24% Similarity=0.303 Sum_probs=205.3
Q ss_pred ccCCCCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccCCCCCcHHHHHHHhCcHHHHHHH
Q 007741 69 VTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNEL 148 (591)
Q Consensus 69 ~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~L 148 (591)
..+.+|.||||.||..|+.+++++|++. +..++.+|..|.||||+|+..|+.+++++|
T Consensus 54 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~----------------------g~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 111 (285)
T 3d9h_A 54 GDAVSDWSPMHEAAIHGHQLSLRNLISQ----------------------GWAVNIITADHVSPLHEACLGGHLSCVKIL 111 (285)
T ss_dssp SSSCCSCCHHHHHHHTTCHHHHHHHHHT----------------------TCCSCEECTTCCCHHHHHHHTTCHHHHHHH
T ss_pred CCCccCCCHHHHHHHcCCHHHHHHHHHC----------------------CCCCCCcCCCCCCHHHHHHHCCcHHHHHHH
Confidence 3678899999999999999999999986 666889999999999999999999999999
Q ss_pred HhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceec
Q 007741 149 LKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEIS 228 (591)
Q Consensus 149 l~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~ 228 (591)
++++++ ++..|..|.||||+|+..|+.+++++|+++++++.. +..|.||||+|+..|+.+++++|+++ +.+++..
T Consensus 112 l~~ga~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~ 186 (285)
T 3d9h_A 112 LKHGAQ--VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP--ESDLASPIHEAARRGHVECVNSLIAY-GGNIDHK 186 (285)
T ss_dssp HHTTCC--SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC--SCTTSCHHHHHHHHTCHHHHHHHHHT-TCCTTCC
T ss_pred HHCCCC--CCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCc
Confidence 998654 577889999999999999999999999999998743 44599999999999999999999998 5567888
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHH
Q 007741 229 RSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVAT 308 (591)
Q Consensus 229 ~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~ 308 (591)
|..|.||||+|+..|+.+++++|++.|+++. .|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+
T Consensus 187 d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~t~l~~A~ 263 (285)
T 3d9h_A 187 ISHLGTPLYLACENQQRACVKKLLESGADVN--QGKGQDSPLHAVVRTASEELACLLMDFGAD-TQAKNAEGKRPVELVP 263 (285)
T ss_dssp BTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT--CCBTTBCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCGGGGSC
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHhc
Confidence 9999999999999999999999999999984 388999999999999999999999999998 8999999999999999
Q ss_pred HcCcHHHHHHHhcCCCCCccc
Q 007741 309 RKKRTEIVTELLSLPDTNVNA 329 (591)
Q Consensus 309 ~~g~~~iv~~Ll~~~g~d~~~ 329 (591)
++.+++++|+++.|+++..
T Consensus 264 --~~~~~~~~Ll~~~~a~l~~ 282 (285)
T 3d9h_A 264 --PESPLAQLFLEREGASLPK 282 (285)
T ss_dssp --TTSHHHHHHHHHC------
T ss_pred --CccHHHHHHHHhhccCCCC
Confidence 5579999999976777643
No 23
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=8.1e-37 Score=294.44 Aligned_cols=222 Identities=24% Similarity=0.257 Sum_probs=198.7
Q ss_pred CCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCC--CCCcccCCCCCCCHHHHHH
Q 007741 129 GETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHD--PSLSQTTGPSNATPLVSAA 206 (591)
Q Consensus 129 g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~--~~~~~~~~~~g~tpL~~A~ 206 (591)
|+||||.|+..|+.+++++|++.+... ....|..|.||||+|+..|+.+++++|++++ +++....+..|.||||+|+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~ 80 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSL-LLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC 80 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGG-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccc-cccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHH
Confidence 789999999999999999999987543 3557889999999999999999999999999 5554447889999999999
Q ss_pred HcCCHHHHHHHHhcC-CCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHH
Q 007741 207 TRGHTAVVNELLSKD-GGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLL 285 (591)
Q Consensus 207 ~~g~~~~v~~LL~~~-~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~L 285 (591)
..|+.+++++|++++ ..+++..+..|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|
T Consensus 81 ~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~L 159 (228)
T 2dzn_A 81 SVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASV-RIKDKFNQIPLHRAASVGSLKLIELL 159 (228)
T ss_dssp HHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999985 2667778999999999999999999999999999998 67799999999999999999999999
Q ss_pred HHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHh
Q 007741 286 LEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLAR 359 (591)
Q Consensus 286 l~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~ 359 (591)
++.|...++.+|..|+||||+|+..|+.+++++|++..|+|++.+|..|+||+|+|.+.+ +.++|.+
T Consensus 160 l~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~~-------~~~~l~~ 226 (228)
T 2dzn_A 160 CGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQ-------VKKFFLN 226 (228)
T ss_dssp HTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSSTT-------HHHHHHT
T ss_pred HhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHHH-------HHHHHHh
Confidence 999944489999999999999999999999999994369999999999999999997543 5555554
No 24
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=4.2e-36 Score=289.47 Aligned_cols=220 Identities=24% Similarity=0.291 Sum_probs=197.9
Q ss_pred CCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccCCCCCcHHHHHHHhCcHHHHHHHHhcCC
Q 007741 74 NDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELLKYST 153 (591)
Q Consensus 74 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~ 153 (591)
|+||||.|++.|+.++++.|++.. ....+..|..|.||||+|+..|+.+++++|+++++
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~---------------------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 60 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSK---------------------PSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKME 60 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHC---------------------GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCT
T ss_pred CccHHHHHHHhCCHHHHHHHHhcC---------------------ccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 679999999999999999999763 33355689999999999999999999999999987
Q ss_pred CccCcc-CCCCCChHHHHHHHhCcHHHHHHHHhCC--CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCC
Q 007741 154 KEGLTR-KNRSGFDPLHIAAVQGHHAIVQVLLDHD--PSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRS 230 (591)
Q Consensus 154 ~~~~~~-~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~--~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~ 230 (591)
+.++.. .+..|.||||+|+..|+.+++++|++++ +++ +..+..|.||||+|+..|+.+++++|+++ +.+++..|.
T Consensus 61 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~ 138 (228)
T 2dzn_A 61 NVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL-NKITNQGVTCLHLAVGKKWFEVSQFLIEN-GASVRIKDK 138 (228)
T ss_dssp TCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCT
T ss_pred cccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-ccCCcCCCCHHHHHHHcCCHhHHHHHHHc-CCCccccCC
Confidence 666666 8889999999999999999999999998 665 66788999999999999999999999998 666888899
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcC-cccccccCCCCCcHHHHHHhCCCHHHHHHHH-HcCcccccCCCCCCCcHHHHHH
Q 007741 231 NGKNALHFAARQGHVDVVKALLSKD-PQLARRTDKKGQTALHMAVKGQSCEVVKLLL-EADAAIVMLPDKFGNTALHVAT 308 (591)
Q Consensus 231 ~g~tpLh~A~~~g~~~~v~~Ll~~~-~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll-~~~~~~~~~~d~~g~T~Lh~A~ 308 (591)
.|.||||+|+..|+.+++++|++.+ .++ +..|..|+||||+|+..|+.+++++|+ +.|++ ++.+|.+|.||||+|+
T Consensus 139 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~-~~~~~~~g~t~l~~A~ 216 (228)
T 2dzn_A 139 FNQIPLHRAASVGSLKLIELLCGLGKSAV-NWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE-YDLVDNKGAKAEDVAL 216 (228)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHTTTCCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCC-SCCBCTTSCBGGGGCS
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCcccc-cCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC-CCccCCCCCcHHHHHH
Confidence 9999999999999999999999999 555 778999999999999999999999999 88888 8899999999999997
Q ss_pred HcCcHHHHHHHhc
Q 007741 309 RKKRTEIVTELLS 321 (591)
Q Consensus 309 ~~g~~~iv~~Ll~ 321 (591)
.. +++++|++
T Consensus 217 ~~---~~~~~l~~ 226 (228)
T 2dzn_A 217 NE---QVKKFFLN 226 (228)
T ss_dssp ST---THHHHHHT
T ss_pred HH---HHHHHHHh
Confidence 65 45556655
No 25
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.8e-37 Score=304.05 Aligned_cols=217 Identities=27% Similarity=0.365 Sum_probs=172.1
Q ss_pred ccCCCCCcHHHHHHHhCcHHHHHHHHhcCCCc------cCccCCCCCChHHHHHHHhCcH-HHHHHHHhCCCCCcccCCC
Q 007741 124 EVNELGETALFTAADKGHIEVVNELLKYSTKE------GLTRKNRSGFDPLHIAAVQGHH-AIVQVLLDHDPSLSQTTGP 196 (591)
Q Consensus 124 ~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~------~~~~~~~~g~t~Lh~A~~~g~~-~iv~~Ll~~~~~~~~~~~~ 196 (591)
..|..+.+||+.||..|+.++|++||+.+... .++..+..|.||||.|+..++. .+++.|++.|+++ +..|.
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadv-n~~d~ 84 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGV-NVTSQ 84 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCT-TCCCT
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCC-CCcCC
Confidence 34667789999999999999999999987543 2455677899999999988876 4889999999998 67889
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhC
Q 007741 197 SNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKG 276 (591)
Q Consensus 197 ~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 276 (591)
+|.||||+|+..|+.+++++|++. +.+++..+.+|.||+|.|+..++.+++++|++.|+++ +..|..|+||||+|+..
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~~-~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n~~d~~g~TpL~~A~~~ 162 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLKH-GANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKP-NKKDLSGNTPLIYACSG 162 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhc-CCCcCccCCCCCCccccccccChHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHC
Confidence 999999999999999999999988 5567788999999999999999999999999999998 67799999999999999
Q ss_pred CCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCC
Q 007741 277 QSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLP 345 (591)
Q Consensus 277 ~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~ 345 (591)
|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|++ .|+|++.+|..|+||||+|++.+
T Consensus 163 g~~~~v~~Ll~~gad-vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~-~Gad~~~~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 163 GHHELVALLLQHGAS-INASNNKGNTALHEAVIEKHVFVVELLLL-HGASVQVLNKRQRTAVDCAEQNS 229 (269)
T ss_dssp TCGGGHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHH-TTCCSCCCCTTSCCSGGGSCTTC
T ss_pred CCHHHHHHHHHCCCC-CCccccCCCcHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHhCC
Confidence 999999999999998 89999999999999999999999999999 49999999999999999998655
No 26
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=8.7e-37 Score=317.24 Aligned_cols=257 Identities=20% Similarity=0.210 Sum_probs=219.5
Q ss_pred cccCCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCC-CCCChHHHHHHHhCcHHHHHHHH--------hCCCCCccc
Q 007741 123 NEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKN-RSGFDPLHIAAVQGHHAIVQVLL--------DHDPSLSQT 193 (591)
Q Consensus 123 ~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~-~~g~t~Lh~A~~~g~~~iv~~Ll--------~~~~~~~~~ 193 (591)
+..|..|.||||+|+..|+ +++++|++. +++..| ..|+||||+|+..|+.+++++|+ +.|+++ +.
T Consensus 88 ~~~~~~g~t~L~~Aa~~~~-~~~~~L~~~----~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~v-n~ 161 (373)
T 2fo1_E 88 TEPEPESPIKLHTEAAGSY-AITEPITRE----SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADV-NA 161 (373)
T ss_dssp ------CCCHHHHHHHSSS-CCCSCCSTT----TTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCT-TC
T ss_pred cCCCCCCccHHHHHhcCCc-hHHHHhccc----cccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCC-cC
Confidence 3458889999999999654 788877652 355666 68999999999999998887776 788887 66
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcC---cccccccCCCCCcHH
Q 007741 194 TGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKD---PQLARRTDKKGQTAL 270 (591)
Q Consensus 194 ~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~---~~~~~~~d~~g~t~L 270 (591)
.|..|.||||+|+..|+.+++++|+++ +.+++..+..|.||||+|+..|+.+++++|++.+ .++ +..|..|.|||
T Consensus 162 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~-ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~d~~g~t~L 239 (373)
T 2fo1_E 162 MDCDENTPLMLAVLARRRRLVAYLMKA-GADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDI-EELDRNGMTAL 239 (373)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTT-SCCCTTSCCHH
T ss_pred CCCCCCCHHHHHHHcChHHHHHHHHHC-CCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccCh-hhcCCCCCCHH
Confidence 788999999999999999999999998 5667888999999999999999999999999987 455 66799999999
Q ss_pred HHHHhCC---CHHHHHHHHHcCcccccC--------CCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHH
Q 007741 271 HMAVKGQ---SCEVVKLLLEADAAIVML--------PDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALD 339 (591)
Q Consensus 271 h~A~~~~---~~~~v~~Ll~~~~~~~~~--------~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~ 339 (591)
|+|+..+ +.+++++|+++|++ ++. .|..|+||||+|+..|+.+++++|++..+++++.+|..|+||||
T Consensus 240 ~~A~~~~~~~~~~~v~~Ll~~g~~-~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~ 318 (373)
T 2fo1_E 240 MIVAHNEGRDQVASAKLLVEKGAK-VDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIM 318 (373)
T ss_dssp HHHHHSCSTTHHHHHHHHHHHTCC-SSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHH
T ss_pred HHHHHhCCcchHHHHHHHHHCCCC-cccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHH
Confidence 9999988 89999999999987 443 67799999999999999999999998767999999999999999
Q ss_pred HHhhCCCChhhHHHHHHHHhcCcccccccCCchHHhhhhhhhhhhhhhhHHHH
Q 007741 340 IAEGLPSSEEASEIKDCLARCGAVRANELNQPRDELRKTVTQIKKDVHTQLEQ 392 (591)
Q Consensus 340 ~A~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 392 (591)
+|+..+ +.+++++|++.|++...........+..+......++.+.|.+
T Consensus 319 ~A~~~g----~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~ 367 (373)
T 2fo1_E 319 LAAQEG----RIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR 367 (373)
T ss_dssp HHHHHT----CHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHcC----CHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 999999 8999999999999887776667777777777666666665544
No 27
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=7.7e-36 Score=297.07 Aligned_cols=249 Identities=22% Similarity=0.234 Sum_probs=192.3
Q ss_pred ccccCCCCCcHHHHHHHhCcHHHHHHHHhcCCCcc-CccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCC
Q 007741 122 VNEVNELGETALFTAADKGHIEVVNELLKYSTKEG-LTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNAT 200 (591)
Q Consensus 122 ~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~-~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t 200 (591)
++.+|..|.||||+|+..|+.++|++|++++.+.. ++..+..|+||||+|+..|+.+++++|+++|+++ +..+..|.|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t 80 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHT 80 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCC
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCC
Confidence 56789999999999999999999999999876643 6788899999999999999999999999999998 577889999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCcc------------eecCCCCCcHHHHHHHcCCHHHHH-HHHhcCcccccccCCCCC
Q 007741 201 PLVSAATRGHTAVVNELLSKDGGLL------------EISRSNGKNALHFAARQGHVDVVK-ALLSKDPQLARRTDKKGQ 267 (591)
Q Consensus 201 pL~~A~~~g~~~~v~~LL~~~~~~~------------~~~~~~g~tpLh~A~~~g~~~~v~-~Ll~~~~~~~~~~d~~g~ 267 (591)
|||+|+..|+.+++++|++++.... ......+.++++.++..+...... .+...+.++ +..|..|.
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~ 159 (282)
T 1oy3_D 81 ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQL-EAENYDGH 159 (282)
T ss_dssp HHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGT-TCCCTTSC
T ss_pred HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcC-CCcCCCCc
Confidence 9999999999999999998754321 122345677787777665544443 344445555 67799999
Q ss_pred cHHHHHHhCCCHHHHHHHHHcCcccccCCCC-CCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCC
Q 007741 268 TALHMAVKGQSCEVVKLLLEADAAIVMLPDK-FGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPS 346 (591)
Q Consensus 268 t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~-~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~ 346 (591)
||||+|+..|+.+++++|+++|++ ++.++. .|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..+
T Consensus 160 t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~tpL~~A~~~~- 236 (282)
T 1oy3_D 160 TPLHVAVIHKDAEMVRLLRDAGAD-LNKPEPTCGRTPLHLAVEAQAASVLELLLKA-GADPTARMYGGRTPLGSALLRP- 236 (282)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHTSS-
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCcCHHHHHHHcCCHHHHHHHHHc-CCCCcccccCCCCHHHHHHHcC-
Confidence 999999999999999999999998 666664 599999999999999999999995 9999999999999999999999
Q ss_pred ChhhHHHHHHHHhcCcccccccCCchHHhhhh
Q 007741 347 SEEASEIKDCLARCGAVRANELNQPRDELRKT 378 (591)
Q Consensus 347 ~~~~~~i~~~L~~~ga~~~~~~~~~~~~l~~~ 378 (591)
+.+++++|+++|++..........++...
T Consensus 237 ---~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a 265 (282)
T 1oy3_D 237 ---NPILARLLRAHGAPEPEDGGDKLSPCSSS 265 (282)
T ss_dssp ---CHHHHHHHHHTTCCCCCCC----------
T ss_pred ---CcHHHHHHHHcCCCcCcCCCccccccccc
Confidence 89999999999999876666555555443
No 28
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=9.6e-37 Score=306.68 Aligned_cols=238 Identities=25% Similarity=0.303 Sum_probs=209.1
Q ss_pred CCCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccCCCCCcHHHHHHHhCcHHHHHHHHhc
Q 007741 72 RHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELLKY 151 (591)
Q Consensus 72 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~ 151 (591)
..|.||||.||..|+.++++.|++. +..++..|..|.||||+|+..|+.++|++|+++
T Consensus 38 ~~~~t~l~~A~~~g~~~~v~~Ll~~----------------------g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 95 (299)
T 1s70_B 38 FDDGAVFLAACSSGDTEEVLRLLER----------------------GADINYANVDGLTALHQACIDDNVDMVKFLVEN 95 (299)
T ss_dssp ECHHHHHHHHHHHTCHHHHHHHHHH----------------------CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCccHHHHHHHcCCHHHHHHHHHc----------------------CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 3567999999999999999999986 666888999999999999999999999999998
Q ss_pred CCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCC
Q 007741 152 STKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSN 231 (591)
Q Consensus 152 ~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~ 231 (591)
|++ ++..|..|.||||+|+..|+.+++++|+++|+++ ...+..|.||||+|+..|+.++++.++...+...+..+..
T Consensus 96 ga~--~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~ 172 (299)
T 1s70_B 96 GAN--INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHV-GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKE 172 (299)
T ss_dssp TCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred CCC--CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhh
Confidence 755 5778889999999999999999999999999997 6678899999999999999999999998866655544433
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcC
Q 007741 232 GKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKK 311 (591)
Q Consensus 232 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g 311 (591)
+.++++ ..+..++..+.......+..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|
T Consensus 173 ~~~~~~--------~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d-~~~~d~~g~tpL~~A~~~~ 243 (299)
T 1s70_B 173 EERIML--------RDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD-VNIKDYDGWTPLHAAAHWG 243 (299)
T ss_dssp HHHHHH--------HHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTT
T ss_pred hhhHHH--------HHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHhcC
Confidence 333333 3445566666665566788999999999999999999999999988 8899999999999999999
Q ss_pred cHHHHHHHhcCCCCCcccccCCCCCHHHHHhhC
Q 007741 312 RTEIVTELLSLPDTNVNALTRDHKTALDIAEGL 344 (591)
Q Consensus 312 ~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~ 344 (591)
+.+++++|++. |+|++.+|..|+||||+|.+.
T Consensus 244 ~~~~v~~Ll~~-gad~~~~d~~g~t~l~~A~~~ 275 (299)
T 1s70_B 244 KEEACRILVEN-LCDMEAVNKVGQTAFDVADED 275 (299)
T ss_dssp CHHHHHHHHHT-TCCTTCCCTTSCCTTTSCCSG
T ss_pred CHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHH
Confidence 99999999995 999999999999999999653
No 29
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=287.74 Aligned_cols=233 Identities=26% Similarity=0.360 Sum_probs=212.2
Q ss_pred ccccCCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCH
Q 007741 122 VNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATP 201 (591)
Q Consensus 122 ~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tp 201 (591)
++..|..|.||||.|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++++++.....+..|.||
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 79 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYD--VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTP 79 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCH
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCC--cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCCh
Confidence 456688999999999999999999999998754 577888999999999999999999999999999877777789999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCC-HH
Q 007741 202 LVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQS-CE 280 (591)
Q Consensus 202 L~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~-~~ 280 (591)
||+|+..|+.+++++|++. +..++..+..|.||||+|+..|+.+++++|++.++++ +..|..|.||||+|+..++ .+
T Consensus 80 L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~-~~~~~~g~t~l~~a~~~~~~~~ 157 (240)
T 3eu9_A 80 LHWATRQGHLSMVVQLMKY-GADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDV-DMMDQNGMTPLMWAAYRTHSVD 157 (240)
T ss_dssp HHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHCCSST
T ss_pred hHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCc-cccCCCCCcHHHHHHHhCChHH
Confidence 9999999999999999988 5567778999999999999999999999999999988 6779999999999996555 89
Q ss_pred HHHHHHHcCcccccCCCC-CCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHh
Q 007741 281 VVKLLLEADAAIVMLPDK-FGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLAR 359 (591)
Q Consensus 281 ~v~~Ll~~~~~~~~~~d~-~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~ 359 (591)
++++|++.+++ ++..+. .|+||||+|+..|+.+++++|+++ |++++.+|..|+|||++|++.+ ..+++++|.+
T Consensus 158 ~~~~L~~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~----~~~~v~~L~~ 231 (240)
T 3eu9_A 158 PTRLLLTFNVS-VNLGDKYHKNTALHWAVLAGNTTVISLLLEA-GANVDAQNIKGESALDLAKQRK----NVWMINHLQE 231 (240)
T ss_dssp THHHHHHTTCC-TTCCCTTTCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCBCTTSCBHHHHHHHTT----CHHHHHHHHH
T ss_pred HHHHHHhcCCC-cchhhccCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcC----cHHHHHHHHH
Confidence 99999999998 666676 899999999999999999999995 9999999999999999999999 8999999999
Q ss_pred cCccc
Q 007741 360 CGAVR 364 (591)
Q Consensus 360 ~ga~~ 364 (591)
.++..
T Consensus 232 ~~~~~ 236 (240)
T 3eu9_A 232 ARQAK 236 (240)
T ss_dssp HC---
T ss_pred hhhcc
Confidence 98764
No 30
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=300.34 Aligned_cols=222 Identities=25% Similarity=0.332 Sum_probs=169.9
Q ss_pred CCCCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccCCCCCcHHHHHHHhCcHH-HHHHHH
Q 007741 71 GRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIE-VVNELL 149 (591)
Q Consensus 71 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~TpL~~Aa~~g~~~-~v~~Ll 149 (591)
|.++.+||+.||+.|+.++|++||+....... .....++..|..|.||||.|+..++.+ ++++|+
T Consensus 8 d~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~--------------~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll 73 (269)
T 4b93_B 8 DYREVEKLLRAVADGDLEMVRYLLEWTEEDLE--------------DAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVP 73 (269)
T ss_dssp CCHHHHHHHHHHHTTCHHHHHHHHTCC-----------------------------------------------------
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCcccc--------------cccccccccCccCCCHHHHHHHhCCHHHHHHHHH
Confidence 45566999999999999999999986432110 013346778889999999999988764 889999
Q ss_pred hcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecC
Q 007741 150 KYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISR 229 (591)
Q Consensus 150 ~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~ 229 (591)
+.|++ ++..|.+|+||||+|+..|+.+++++|++.++++ ...+..|.||+++|+..++.+++++|++. +.+++..|
T Consensus 74 ~~Gad--vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~-g~~~n~~d 149 (269)
T 4b93_B 74 ASGLG--VNVTSQDGSSPLHVAALHGRADLIPLLLKHGANA-GARNADQAVPLHLACQQGHFQVVKCLLDS-NAKPNKKD 149 (269)
T ss_dssp -CCCC--TTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCC
T ss_pred HCCCC--CCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCc-CccCCCCCCccccccccChHHHHHHHHHC-CCCCCCCC
Confidence 98765 5778999999999999999999999999999997 66788999999999999999999999998 56678899
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHH
Q 007741 230 SNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATR 309 (591)
Q Consensus 230 ~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~ 309 (591)
..|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|++
T Consensus 150 ~~g~TpL~~A~~~g~~~~v~~Ll~~gadv-n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad-~~~~d~~G~TpL~~A~~ 227 (269)
T 4b93_B 150 LSGNTPLIYACSGGHHELVALLLQHGASI-NASNNKGNTALHEAVIEKHVFVVELLLLHGAS-VQVLNKRQRTAVDCAEQ 227 (269)
T ss_dssp TTCCCHHHHHHHTTCGGGHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCSGGGSCT
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHCCCCC-CccccCCCcHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHh
Confidence 99999999999999999999999999998 77799999999999999999999999999998 89999999999999998
Q ss_pred cCc
Q 007741 310 KKR 312 (591)
Q Consensus 310 ~g~ 312 (591)
+++
T Consensus 228 ~~~ 230 (269)
T 4b93_B 228 NSK 230 (269)
T ss_dssp TCH
T ss_pred CCc
Confidence 775
No 31
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.2e-35 Score=305.24 Aligned_cols=263 Identities=25% Similarity=0.268 Sum_probs=229.9
Q ss_pred cccccCCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCC
Q 007741 121 VVNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNAT 200 (591)
Q Consensus 121 ~~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t 200 (591)
..+..+..|.|+||.||+.|+.+.|+.|+.. .+.+++..|..|.||||+|+..|+.+++++|+++|+++ +..|..|.|
T Consensus 16 ~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t 93 (351)
T 3utm_A 16 KAVLTGEYKKDELLEAARSGNEEKLMALLTP-LNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDKGGLV 93 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHCCT-TTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCC
T ss_pred eeeeeccccchhHHHHHHcCCHHHHHHHHHh-cCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCc
Confidence 3455567789999999999999999999985 34557788999999999999999999999999999997 667889999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHH-------
Q 007741 201 PLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMA------- 273 (591)
Q Consensus 201 pL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A------- 273 (591)
|||+|+..|+.+++++|+++ +..++..|..|.||||+|+..|+.+++++|+++|+++ +..+..|.||+|+|
T Consensus 94 ~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~~~l~~a~~~~~~~ 171 (351)
T 3utm_A 94 PLHNACSYGHYEVTELLLKH-GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADP-TLVNCHGKSAVDMAPTPELRE 171 (351)
T ss_dssp HHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCSSHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-ccccCCCCcchHHHhhhhhHH
Confidence 99999999999999999998 5667888999999999999999999999999999998 66799999998875
Q ss_pred --------------HhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHc---CcHHHHHHHhcCCCCCcccccCCCCC
Q 007741 274 --------------VKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRK---KRTEIVTELLSLPDTNVNALTRDHKT 336 (591)
Q Consensus 274 --------------~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~---g~~~iv~~Ll~~~g~d~~~~d~~G~t 336 (591)
+..++.+.++.++..... ....+..|.||||+|+.. +..+++++|++ .|++++.+|..|+|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t 249 (351)
T 3utm_A 172 RLTYEFKGHSLLQAAREADLAKVKKTLALEII-NFKQPQSHETALHCAVASLHPKRKQVAELLLR-KGANVNEKNKDFMT 249 (351)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCT-TCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHH-TTCCTTCCCTTCCC
T ss_pred HHHhhhcccHHHHHHHhccHHHHHHHHHhhcc-cccCCCCCCCHHHHHHHHhCccHHHHHHHHHH-cCCCcCCcCCCCCC
Confidence 456677777777776544 445678899999999999 66899999999 59999999999999
Q ss_pred HHHHHhhCCCChhhHHHHHHHHhcCcccccccCCchHHhhhhhhhhhhhhhhHHHHh
Q 007741 337 ALDIAEGLPSSEEASEIKDCLARCGAVRANELNQPRDELRKTVTQIKKDVHTQLEQT 393 (591)
Q Consensus 337 ~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~ 393 (591)
|||+|+..+ +.+++++|++.|++.........+.+..+......++.+.|-+.
T Consensus 250 ~L~~A~~~g----~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 302 (351)
T 3utm_A 250 PLHVAAERA----HNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSY 302 (351)
T ss_dssp HHHHHHHTT----CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHcC----CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 999999999 88999999999999887777777888888887777777777654
No 32
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=4.6e-35 Score=299.96 Aligned_cols=253 Identities=26% Similarity=0.331 Sum_probs=211.3
Q ss_pred CCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCC-CCCChHHHHHHHhCcHHHHHHHHhCCCCCc-------------
Q 007741 126 NELGETALFTAADKGHIEVVNELLKYSTKEGLTRKN-RSGFDPLHIAAVQGHHAIVQVLLDHDPSLS------------- 191 (591)
Q Consensus 126 n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~-~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~------------- 191 (591)
+.+|.||||.||+.|+.++|++||++|++. +.++ ..|+||||+|+..|+.++|++|+++|+++.
T Consensus 22 ~~~~~t~L~~Av~~g~~~~V~~LL~~Gadv--n~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~ 99 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNEDVDLVQQLLEGGANV--NFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILA 99 (337)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTCCT--TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCCC--CccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHH
Confidence 345789999999999999999999998664 4455 459999999999999999999999988653
Q ss_pred -------------------ccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCc---------ceecCCCCCcHHHHHHHcC
Q 007741 192 -------------------QTTGPSNATPLVSAATRGHTAVVNELLSKDGGL---------LEISRSNGKNALHFAARQG 243 (591)
Q Consensus 192 -------------------~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~---------~~~~~~~g~tpLh~A~~~g 243 (591)
+..|..|.||||+|+..|+.+++++|++++... ....+..|.||||+|+..|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g 179 (337)
T 4g8k_A 100 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG 179 (337)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHT
T ss_pred HhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCC
Confidence 245677899999999999999999999884332 1234567999999999999
Q ss_pred CHHHHHHHHh-cCcccccccCCCCCcHHHHHHhCCC----HHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHH
Q 007741 244 HVDVVKALLS-KDPQLARRTDKKGQTALHMAVKGQS----CEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTE 318 (591)
Q Consensus 244 ~~~~v~~Ll~-~~~~~~~~~d~~g~t~Lh~A~~~~~----~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~ 318 (591)
+.+++++|++ .|+++ +..|..|.|+||.++..+. .+++++|+++|++ ++.+|..|+||||+|+..|+.++++.
T Consensus 180 ~~~~v~~LL~~~gad~-n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad-~n~~d~~g~t~L~~a~~~~~~~~v~~ 257 (337)
T 4g8k_A 180 HVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-VNVRGERGKTPLILAVEKKHLGLVQR 257 (337)
T ss_dssp CHHHHHHHHHHSCCCT-TCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCC-TTCCCGGGCCHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHhccCCCc-CccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhhhhHHHHH
Confidence 9999999996 47777 7779999999998875433 4688999999998 89999999999999999999999999
Q ss_pred HhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCcccccccCCchHHhhhhhhhhhhhhhhHHH
Q 007741 319 LLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVRANELNQPRDELRKTVTQIKKDVHTQLE 391 (591)
Q Consensus 319 Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 391 (591)
|++..|++++.+|..|+||||+|+..+ +.+++++|+++|++.... +.+..+......++.+.|-
T Consensus 258 Ll~~~~~~vn~~d~~G~TpL~~A~~~g----~~~iv~~Ll~~GAd~n~~-----~~L~~A~~~~~~~iv~~Ll 321 (337)
T 4g8k_A 258 LLEQEHIEINDTDSDGKTALLLAVELK----LKKIAELLCKRGASTDCG-----DLVMTARRNYDHSLVKVLL 321 (337)
T ss_dssp HHTSTTCCTTCBCTTSCBHHHHHHHTT----CHHHHHHHHTTSCSSTTC-----CHHHHHHHTTCHHHHHHHH
T ss_pred HHHhcCCcccCcCCCCCCHHHHHHHcC----CHHHHHHHHHCCCCCCCC-----CHHHHHHHcCCHHHHHHHH
Confidence 999889999999999999999999999 899999999999975432 2455555554555544443
No 33
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=5.4e-35 Score=283.39 Aligned_cols=231 Identities=25% Similarity=0.275 Sum_probs=205.4
Q ss_pred cCCCCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccCCCCCcHHHHHHHhCcHHHHHHHH
Q 007741 70 TGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELL 149 (591)
Q Consensus 70 ~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll 149 (591)
.|..|.++||.|+..|+.+++++|++. +..++..|..|.||||+|+..|+.+++++|+
T Consensus 5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~----------------------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 62 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGIYERCRELVEA----------------------GYDVRQPDKENVTLLHWAAINNRIDLVKYYI 62 (240)
T ss_dssp CSCGGGCCHHHHHHTTCHHHHHHHHHT----------------------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred cccccchHHHHHHHcCChHHHHHHHHc----------------------CCCcCCCCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 366788999999999999999999986 6668888999999999999999999999999
Q ss_pred hcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecC
Q 007741 150 KYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISR 229 (591)
Q Consensus 150 ~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~ 229 (591)
+++...+ ...+..|.||||+|+..|+.+++++|+++++++ ...+..|.||||+|+..|+.+++++|+++ +..++..+
T Consensus 63 ~~~~~~~-~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~ 139 (240)
T 3eu9_A 63 SKGAIVD-QLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP-SLIDGEGCSCIHLAAQFGHTSIVAYLIAK-GQDVDMMD 139 (240)
T ss_dssp HTTCCTT-CCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCC
T ss_pred HcCCcch-hhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCHHHHHHHHHhc-CCCccccC
Confidence 9876542 344556999999999999999999999999988 56788999999999999999999999998 55677889
Q ss_pred CCCCcHHHHHHHcCC-HHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHH
Q 007741 230 SNGKNALHFAARQGH-VDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVAT 308 (591)
Q Consensus 230 ~~g~tpLh~A~~~g~-~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~ 308 (591)
..|.||||+|+..++ .+++++|++.++++....+..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+
T Consensus 140 ~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~ 218 (240)
T 3eu9_A 140 QNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGAN-VDAQNIKGESALDLAK 218 (240)
T ss_dssp TTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCBCTTSCBHHHHHH
T ss_pred CCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHH
Confidence 999999999997766 89999999999998444334899999999999999999999999988 8899999999999999
Q ss_pred HcCcHHHHHHHhcCCCCCc
Q 007741 309 RKKRTEIVTELLSLPDTNV 327 (591)
Q Consensus 309 ~~g~~~iv~~Ll~~~g~d~ 327 (591)
+.|+.+++++|++. +.+.
T Consensus 219 ~~~~~~~v~~L~~~-~~~~ 236 (240)
T 3eu9_A 219 QRKNVWMINHLQEA-RQAK 236 (240)
T ss_dssp HTTCHHHHHHHHHH-C---
T ss_pred HcCcHHHHHHHHHh-hhcc
Confidence 99999999999984 4443
No 34
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.6e-35 Score=296.02 Aligned_cols=224 Identities=20% Similarity=0.190 Sum_probs=202.4
Q ss_pred ccccCCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCH
Q 007741 122 VNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATP 201 (591)
Q Consensus 122 ~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tp 201 (591)
++.+|..|.||||+|+..|+.++|++|+++|++. +.. +|.||||+|+..|+.+++++|+++|+++ +..|..|.||
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~ 98 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALK--NLL--ENEFPLHQAATLEDTKIVKILLFSGLDD-SQFDDKGNTA 98 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGG--SCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCT-TCCCTTSCCH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC--CCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcH
Confidence 7889999999999999999999999999987654 333 4899999999999999999999999998 5678899999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCcceecCCCC-CcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHH
Q 007741 202 LVSAATRGHTAVVNELLSKDGGLLEISRSNG-KNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCE 280 (591)
Q Consensus 202 L~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g-~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~ 280 (591)
||+|+..|+.+++++|+++ +.+++..+..| .||||+|+..|+.+++++|++++++... ...|+||||+|+..|+.+
T Consensus 99 L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~g~~~ 175 (285)
T 3kea_A 99 LYYAVDSGNMQTVKLFVKK-NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD--LAILLSCIHITIKNGHVD 175 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHH-CGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCC--CSTHHHHHHHHHHTTCHH
T ss_pred HHHHHHcCCHHHHHHHHhc-CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccc--ccCCccHHHHHHHcChHH
Confidence 9999999999999999999 66778889999 8999999999999999999999987622 228999999999999999
Q ss_pred HHHHHHHcCcccccCCCCCCCcH-HHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHh
Q 007741 281 VVKLLLEADAAIVMLPDKFGNTA-LHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLAR 359 (591)
Q Consensus 281 ~v~~Ll~~~~~~~~~~d~~g~T~-Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~ 359 (591)
++++|+++|++ ++.+|..|+|| ||+|+..|+.+++++|+++ |++++.+|. .|+..+ +.+++++|++
T Consensus 176 ~v~~Ll~~gad-~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~-gad~~~~~~-------~a~~~~----~~~iv~~Ll~ 242 (285)
T 3kea_A 176 MMILLLDYMTS-TNTNNSLLFIPDIKLAIDNKDIEMLQALFKY-DINIYSANL-------ENVLLD----DAEIAKMIIE 242 (285)
T ss_dssp HHHHHHHHHHH-TCTTCCCBCCTTHHHHHHHTCHHHHHHHTTS-CBCSTTTTG-------GGGTTT----CHHHHHHHHH
T ss_pred HHHHHHHcCCC-CCcccCCCCChHHHHHHHcCCHHHHHHHHHc-CCCCCCCCh-------hhhhcC----CHHHHHHHHH
Confidence 99999999998 89999999998 9999999999999999995 999999984 445566 8999999999
Q ss_pred cCccccc
Q 007741 360 CGAVRAN 366 (591)
Q Consensus 360 ~ga~~~~ 366 (591)
+|++...
T Consensus 243 ~g~~~~~ 249 (285)
T 3kea_A 243 KHVEYKS 249 (285)
T ss_dssp HHHHHTT
T ss_pred cCCCCCC
Confidence 9987543
No 35
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=3.8e-35 Score=281.83 Aligned_cols=217 Identities=21% Similarity=0.266 Sum_probs=189.1
Q ss_pred CcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHh
Q 007741 140 GHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLS 219 (591)
Q Consensus 140 g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~ 219 (591)
|+.+++++|++++.+.+ ...|..|.||||+|+..|+.+++++|+++++++ +..+..|.||||+|+..|+.+++++|++
T Consensus 2 g~~~~i~~Ll~~g~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 79 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLH-NQTDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILIR 79 (223)
T ss_dssp ---CCEETTEETTCCTT-CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCCcc-cccCCCCCchHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 67888888998776532 344778999999999999999999999998887 5677889999999999999999999999
Q ss_pred cCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCC
Q 007741 220 KDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKF 299 (591)
Q Consensus 220 ~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~ 299 (591)
+++...+..+..|.||||+|+..|+.+++++|++.++++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|..
T Consensus 80 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~ 157 (223)
T 2f8y_A 80 NRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNR 157 (223)
T ss_dssp BTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred cCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC-cCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCC
Confidence 877677888889999999999999999999999999887 66788999999999999999999999999887 7888999
Q ss_pred CCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCcccc
Q 007741 300 GNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVRA 365 (591)
Q Consensus 300 g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~~ 365 (591)
|+||||+|+..|+.+++++|+++ |++++.+|..|+||+++|+..+ +.+++++|.++|+...
T Consensus 158 g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~----~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 158 EETPLFLAAREGSYETAKVLLDH-FANRDITDHMDRLPRDIAQERM----HHDIVRLLDEYNLVRS 218 (223)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTT----CHHHHHHHHHTTCSSC
T ss_pred CcCHHHHHHHcCCHHHHHHHHHc-CCCCccccccCCCHHHHHHHhc----chHHHHHHHHcCCCcc
Confidence 99999999999999999999994 8999999999999999999988 8899999999988654
No 36
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.9e-34 Score=276.87 Aligned_cols=214 Identities=23% Similarity=0.322 Sum_probs=191.6
Q ss_pred CCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccc-cCCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCC
Q 007741 85 GDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNE-VNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRS 163 (591)
Q Consensus 85 g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~ 163 (591)
|+.+++++|++. +..++. .|..|.||||+|+..|+.+++++|++++.+ ++..|..
T Consensus 2 g~~~~i~~Ll~~----------------------g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~ 57 (223)
T 2f8y_A 2 DAPAVISDFIYQ----------------------GASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD--ANIQDNM 57 (223)
T ss_dssp ---CCEETTEET----------------------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTT
T ss_pred CcHHHHHHHHHc----------------------CCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCC--CCCcCCC
Confidence 566777777765 334444 488999999999999999999999998755 5678899
Q ss_pred CChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcC
Q 007741 164 GFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQG 243 (591)
Q Consensus 164 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g 243 (591)
|.||||+|+..|+.+++++|+++++......+..|.||||+|+..|+.+++++|+++ +.+++..|..|.||||+|+..|
T Consensus 58 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~ 136 (223)
T 2f8y_A 58 GRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS-HADVNAVDDLGKSALHWAAAVN 136 (223)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCBCTTSCBHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHc-CCCCcCcCCCCCcHHHHHHHcC
Confidence 999999999999999999999999865577889999999999999999999999997 5567888999999999999999
Q ss_pred CHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCC
Q 007741 244 HVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLP 323 (591)
Q Consensus 244 ~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~ 323 (591)
+.+++++|++.++++ +..|..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|++.++.+++++|+++
T Consensus 137 ~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~- 213 (223)
T 2f8y_A 137 NVDAAVVLLKNGANK-DMQNNREETPLFLAAREGSYETAKVLLDHFAN-RDITDHMDRLPRDIAQERMHHDIVRLLDEY- 213 (223)
T ss_dssp CHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-
T ss_pred CHHHHHHHHHcCCCC-CCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-CccccccCCCHHHHHHHhcchHHHHHHHHc-
Confidence 999999999999998 67799999999999999999999999999998 788999999999999999999999999995
Q ss_pred CCC
Q 007741 324 DTN 326 (591)
Q Consensus 324 g~d 326 (591)
|+.
T Consensus 214 g~~ 216 (223)
T 2f8y_A 214 NLV 216 (223)
T ss_dssp TCS
T ss_pred CCC
Confidence 654
No 37
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=4.1e-35 Score=284.48 Aligned_cols=218 Identities=24% Similarity=0.292 Sum_probs=186.6
Q ss_pred cccCCCCCcHHHHHHHhCcHHHHHHHHhcCCCc--cCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCC
Q 007741 123 NEVNELGETALFTAADKGHIEVVNELLKYSTKE--GLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNAT 200 (591)
Q Consensus 123 ~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~--~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t 200 (591)
+.+|.+|.||||+|+..|+.+++++|++.+... +++..+..|.||||+|+..|+.+++++|+++|+++ +..+..|.|
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t 80 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNT 80 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCC
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCC
Confidence 346889999999999999999999999976542 57888999999999999999999999999999987 667889999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCC-----cceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCC-CCCcHHHHHH
Q 007741 201 PLVSAATRGHTAVVNELLSKDGG-----LLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDK-KGQTALHMAV 274 (591)
Q Consensus 201 pL~~A~~~g~~~~v~~LL~~~~~-----~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~-~g~t~Lh~A~ 274 (591)
|||+|+..|+.+++++|++++.. ..+..+..|.||||+|+..|+.+++++|+++|+++ +..+. .|+||||+|+
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~ 159 (236)
T 1ikn_D 81 PLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADV-NAQEPCNGRTALHLAV 159 (236)
T ss_dssp HHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCCHHHHHH
Confidence 99999999999999999998542 25667888999999999999999999999999998 55565 8999999999
Q ss_pred hCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcc--cccCCCCCHHHHHhhC
Q 007741 275 KGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVN--ALTRDHKTALDIAEGL 344 (591)
Q Consensus 275 ~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~--~~d~~G~t~L~~A~~~ 344 (591)
..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++ |++.. ..+..|.||.+.+...
T Consensus 160 ~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~ 229 (236)
T 1ikn_D 160 DLQNPDLVSLLLKCGAD-VNRVTYQGYSPYQLTWGRPSTRIQQQLGQL-TLENLQMLPESEDEESYDTESEF 229 (236)
T ss_dssp HTTCHHHHHHHHTTTCC-SCCCCTTCCCGGGGCTTSSCHHHHHHHHTT-SCGGGSSCCCCCTTTCCCCC---
T ss_pred HcCCHHHHHHHHHcCCC-CCcccCCCCCHHHHHHccCchHHHHHHHHc-chhhhhcCCccchHHHHhhhccc
Confidence 99999999999999988 888999999999999999999999999994 88766 7889999988776543
No 38
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.6e-34 Score=288.79 Aligned_cols=227 Identities=16% Similarity=0.177 Sum_probs=200.2
Q ss_pred hhccCCCCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccCCCCCcHHHHHHHhCcHHHHH
Q 007741 67 KQVTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVN 146 (591)
Q Consensus 67 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~TpL~~Aa~~g~~~~v~ 146 (591)
....|.+|.||||+|+..|+.+++++|++. +..++.. +|.||||+|+..|+.++++
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------g~~~~~~--~g~t~L~~A~~~g~~~~v~ 79 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNA----------------------GALKNLL--ENEFPLHQAATLEDTKIVK 79 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT----------------------TGGGSCC--TTCCHHHHHTTSSSCHHHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhC----------------------CCCCCCC--CCCCHHHHHHHcCCHHHHH
Confidence 356788999999999999999999999986 5556666 4999999999999999999
Q ss_pred HHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCC-CCHHHHHHHcCCHHHHHHHHhcCCCcc
Q 007741 147 ELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSN-ATPLVSAATRGHTAVVNELLSKDGGLL 225 (591)
Q Consensus 147 ~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g-~tpL~~A~~~g~~~~v~~LL~~~~~~~ 225 (591)
+|+++|++ ++..|..|.||||+|+..|+.+++++|+++|+++ +..+..| .||||+|+..|+.+++++|++++....
T Consensus 80 ~Ll~~ga~--~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 156 (285)
T 3kea_A 80 ILLFSGLD--DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRL-MFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF 156 (285)
T ss_dssp HHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGG-GGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTC
T ss_pred HHHHCCCC--CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCC-CccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccc
Confidence 99998765 5678889999999999999999999999999997 5677777 799999999999999999999865442
Q ss_pred eecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcH-HHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHH
Q 007741 226 EISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTA-LHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTAL 304 (591)
Q Consensus 226 ~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~-Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~L 304 (591)
+ ...|.||||+|+..|+.+++++|+++|+++ +..|..|+|| ||+|+..|+.+++++|+++|++ ++.+|
T Consensus 157 ~--~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~-n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad-~~~~~------- 225 (285)
T 3kea_A 157 D--LAILLSCIHITIKNGHVDMMILLLDYMTST-NTNNSLLFIPDIKLAIDNKDIEMLQALFKYDIN-IYSAN------- 225 (285)
T ss_dssp C--CSTHHHHHHHHHHTTCHHHHHHHHHHHHHT-CTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBC-STTTT-------
T ss_pred c--ccCCccHHHHHHHcChHHHHHHHHHcCCCC-CcccCCCCChHHHHHHHcCCHHHHHHHHHcCCC-CCCCC-------
Confidence 2 138999999999999999999999999998 6779999998 9999999999999999999998 67666
Q ss_pred HHHHHcCcHHHHHHHhcCCCCCcccccC
Q 007741 305 HVATRKKRTEIVTELLSLPDTNVNALTR 332 (591)
Q Consensus 305 h~A~~~g~~~iv~~Ll~~~g~d~~~~d~ 332 (591)
+.|+..|+.+++++|+++ |++++..+.
T Consensus 226 ~~a~~~~~~~iv~~Ll~~-g~~~~~~~~ 252 (285)
T 3kea_A 226 LENVLLDDAEIAKMIIEK-HVEYKSDSY 252 (285)
T ss_dssp GGGGTTTCHHHHHHHHHH-HHHHTTCTT
T ss_pred hhhhhcCCHHHHHHHHHc-CCCCCCccc
Confidence 366889999999999994 777665543
No 39
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=2.6e-34 Score=293.08 Aligned_cols=262 Identities=15% Similarity=0.130 Sum_probs=194.6
Q ss_pred cchhhccchhhhccCCCCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccc---cccCCCCCcHH
Q 007741 57 IDQAGKKKYVKQVTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVV---NEVNELGETAL 133 (591)
Q Consensus 57 ~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~n~~g~TpL 133 (591)
+....+........+..|.++++ |+.++++.||+.........+.. ...+... ........+.+
T Consensus 35 v~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~--------a~~~~~~~~~~~~~~~~~~~~ 101 (327)
T 1sw6_A 35 TSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPT--------SLNNDSSNRNSEGGSSNQQQQ 101 (327)
T ss_dssp CCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------------
T ss_pred HHHHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchH--------hhhcccccccccccCCccchh
Confidence 33444444455566788999988 99999999997531100000000 0000000 00111223446
Q ss_pred HHHHHhCcHHHHHHHHhcCCCccCcc-CCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCC--
Q 007741 134 FTAADKGHIEVVNELLKYSTKEGLTR-KNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGH-- 210 (591)
Q Consensus 134 ~~Aa~~g~~~~v~~Ll~~~~~~~~~~-~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~-- 210 (591)
|+|+..+..++++.|++.+.+ ++. .|..|+||||+|+..|+.++|++|+++|+++ +..|..|.||||+|+..|+
T Consensus 102 ~~a~~~~~~~~~~~l~~~g~d--vn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~~~ 178 (327)
T 1sw6_A 102 HVSFDSLLQEVNDAFPNTQLN--LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNY 178 (327)
T ss_dssp --CHHHHHHHHHHHCTTSCCC--SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHH
T ss_pred HHHHHhhHHHHHHHHHhcCCC--cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcccc
Confidence 899999999999999997654 566 7899999999999999999999999999998 6788999999999999998
Q ss_pred -HHHHHHHHhcCCCcceecCCCCCcHHHHHHH----cCCHHHHHHHHhc--------------------CcccccccCCC
Q 007741 211 -TAVVNELLSKDGGLLEISRSNGKNALHFAAR----QGHVDVVKALLSK--------------------DPQLARRTDKK 265 (591)
Q Consensus 211 -~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~----~g~~~~v~~Ll~~--------------------~~~~~~~~d~~ 265 (591)
.++++.|++.....++..|..|.||||+|+. .|+.+++++|++. +.++ +..|..
T Consensus 179 ~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~-~~~~~~ 257 (327)
T 1sw6_A 179 DSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKP-NDKNGE 257 (327)
T ss_dssp HTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC---------------
T ss_pred cHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCc-cccccc
Confidence 6888888888666788899999999999999 8999999999987 5666 667899
Q ss_pred CCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCC
Q 007741 266 GQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLP 345 (591)
Q Consensus 266 g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~ 345 (591)
|.||||.|+. +++|++++ ++.+|..|+||||+|+..|+.+++++|+++ |+|++.+|..|+||||+|++.+
T Consensus 258 g~t~L~~a~~------~~~Ll~~~---~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 258 RKDSILENLD------LKWIIANM---LNAQDSNGDTCLNIAARLGNISIVDALLDY-GADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp --CHHHHHCS------HHHHHHHT---TTCCCTTSCCHHHHHHHHCCHHHHHHHHHT-TCCTTCCCTTSCCGGGGTCC--
T ss_pred CCChhHHHHH------HHHHHHhC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHhcC
Confidence 9999999986 89999983 788999999999999999999999999995 9999999999999999998653
No 40
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=9.9e-34 Score=274.67 Aligned_cols=221 Identities=24% Similarity=0.270 Sum_probs=188.4
Q ss_pred hccCCCCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccCCCCCcHHHHHHHhCcHHHHHH
Q 007741 68 QVTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNE 147 (591)
Q Consensus 68 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~ 147 (591)
+..|.+|.||||.|+..|+.++++.|++..... +..++..|..|.||||+|+..|+.+++++
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~------------------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 63 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGD------------------LAFLNFQNNLQQTPLHLAVITNQPEIAEA 63 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----------------------CCCCCCCCTTCCCHHHHHHHTTCHHHHHC
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhcc------------------HHHhhccCCCCCCHHHHHHHcCCHHHHHH
Confidence 456889999999999999999999999763311 44689999999999999999999999999
Q ss_pred HHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCC-----cccCCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Q 007741 148 LLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSL-----SQTTGPSNATPLVSAATRGHTAVVNELLSKDG 222 (591)
Q Consensus 148 Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~-----~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~ 222 (591)
|+++|++ ++..+..|.||||+|+..|+.+++++|++++++. ....+..|.||||+|+..|+.+++++|+++ +
T Consensus 64 Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g 140 (236)
T 1ikn_D 64 LLGAGCD--PELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSL-G 140 (236)
T ss_dssp CCSCCCC--SCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH-T
T ss_pred HHHcCCC--CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc-C
Confidence 9998755 5678889999999999999999999999998653 356788899999999999999999999998 4
Q ss_pred CcceecCC-CCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccc-cCCCCCC
Q 007741 223 GLLEISRS-NGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIV-MLPDKFG 300 (591)
Q Consensus 223 ~~~~~~~~-~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~-~~~d~~g 300 (591)
.+++..+. .|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|++.. ..++..|
T Consensus 141 ~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~ 219 (236)
T 1ikn_D 141 ADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADV-NRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESED 219 (236)
T ss_dssp CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCS-CCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCT
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccch
Confidence 55677776 9999999999999999999999999998 6779999999999999999999999999998633 4778888
Q ss_pred CcHHHHHHHc
Q 007741 301 NTALHVATRK 310 (591)
Q Consensus 301 ~T~Lh~A~~~ 310 (591)
.|+.+.+...
T Consensus 220 ~~~~~~~~~~ 229 (236)
T 1ikn_D 220 EESYDTESEF 229 (236)
T ss_dssp TTCCCCC---
T ss_pred HHHHhhhccc
Confidence 8887765543
No 41
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.1e-32 Score=266.31 Aligned_cols=192 Identities=24% Similarity=0.369 Sum_probs=145.7
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCc----ccCCCCCCCHHH
Q 007741 128 LGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLS----QTTGPSNATPLV 203 (591)
Q Consensus 128 ~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~----~~~~~~g~tpL~ 203 (591)
.|+||||+|+..|+.+++++|++.. +.+++..|..|+||||+|+..|+.+++++|+++++++. ...|..|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFE-GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTT-CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 4899999999999999999999861 24467788999999999999999999999999988753 345668889999
Q ss_pred HHHHcCCHHHHHHHHhcCCCcceecCC-------------CCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHH
Q 007741 204 SAATRGHTAVVNELLSKDGGLLEISRS-------------NGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTAL 270 (591)
Q Consensus 204 ~A~~~g~~~~v~~LL~~~~~~~~~~~~-------------~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L 270 (591)
+|+..|+.+++++|++++ .+++..+. +|.||||+|+..|+.+++++|+++|+++ +..|..|+|||
T Consensus 81 ~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~L 158 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARG-ASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI-RAQDSLGNTVL 158 (232)
T ss_dssp HHHHTTCHHHHHHHHHTT-CCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred HHHHcCCHHHHHHHHhCC-CCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHH
Confidence 999999999999999884 44444433 5777777777777777777777777766 55567777777
Q ss_pred HHHHhCCCHHHH----HHHHHcCcccc-----cCCCCCCCcHHHHHHHcCcHHHHHHHhcC
Q 007741 271 HMAVKGQSCEVV----KLLLEADAAIV-----MLPDKFGNTALHVATRKKRTEIVTELLSL 322 (591)
Q Consensus 271 h~A~~~~~~~~v----~~Ll~~~~~~~-----~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~ 322 (591)
|+|+..++.+++ ++|+++|++.. +.+|..|+||||+|+..|+.+++++|+++
T Consensus 159 ~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~ 219 (232)
T 2rfa_A 159 HILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQK 219 (232)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 777777777666 66777666532 46666777777777777777777777763
No 42
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=5.5e-33 Score=279.20 Aligned_cols=272 Identities=18% Similarity=0.194 Sum_probs=219.1
Q ss_pred HHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccCCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCc
Q 007741 79 HLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLT 158 (591)
Q Consensus 79 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~ 158 (591)
+.++..|..+.++.++........... .......+..|.||||.||..|+.++|++|+++|.+ ++
T Consensus 3 ~~~a~~~~~~~l~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~--~~ 67 (299)
T 1s70_B 3 MADAKQKRNEQLKRWIGSETDLEPPVV-------------KRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGAD--IN 67 (299)
T ss_dssp SHHHHHHHHHHHHHHHHTTTSSCCSCC-------------CCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCC--TT
T ss_pred hhHHHHHHHHHHHHHHccccccccccc-------------cCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCC--Cc
Confidence 357788888888888865332111000 111233456788999999999999999999998755 57
Q ss_pred cCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHH
Q 007741 159 RKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHF 238 (591)
Q Consensus 159 ~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~ 238 (591)
..|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|+++ +..++..+..|.||||+
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~ 145 (299)
T 1s70_B 68 YANVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAASCGYLDIAEYLISQ-GAHVGAVNSEGDTPLDI 145 (299)
T ss_dssp CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCCCcCCCCCCHHHH
Confidence 78889999999999999999999999999998 66788999999999999999999999998 55677889999999999
Q ss_pred HHHcCCHHHHHHHHhc-CcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHH
Q 007741 239 AARQGHVDVVKALLSK-DPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVT 317 (591)
Q Consensus 239 A~~~g~~~~v~~Ll~~-~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~ 317 (591)
|+..++.++++.++.. +.++ +..+..+.++++ ..+..++..+.......+..|.||||+|+..|+.++++
T Consensus 146 A~~~~~~~~~~~ll~~~~~~~-~~~~~~~~~~~~--------~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 216 (299)
T 1s70_B 146 AEEEAMEELLQNEVNRQGVDI-EAARKEEERIML--------RDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLK 216 (299)
T ss_dssp CCSHHHHHHHHHHHHHHTCCH-HHHHHHHHHHHH--------HHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHH
T ss_pred HHhcchHHHHHHHHhhcCCCc-hhhhhhhhhHHH--------HHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHH
Confidence 9999999999988875 3333 332333333333 34556666666656677889999999999999999999
Q ss_pred HHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCcccccccCCchHHhhhhhhh
Q 007741 318 ELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVRANELNQPRDELRKTVTQ 381 (591)
Q Consensus 318 ~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~l~~~~~~ 381 (591)
+|++ .|++++.+|..|+||||+|+..+ +.+++++|++.|++...........+..+.++
T Consensus 217 ~Ll~-~g~d~~~~d~~g~tpL~~A~~~~----~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~ 275 (299)
T 1s70_B 217 LLIQ-ARYDVNIKDYDGWTPLHAAAHWG----KEEACRILVENLCDMEAVNKVGQTAFDVADED 275 (299)
T ss_dssp HHHT-TTCCTTCCCTTCCCHHHHHHHTT----CHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSG
T ss_pred HHHH-cCCCCCCcCCCCCcHHHHHHhcC----CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHH
Confidence 9999 59999999999999999999999 89999999999998776665566666555433
No 43
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2.5e-32 Score=263.89 Aligned_cols=197 Identities=25% Similarity=0.263 Sum_probs=176.8
Q ss_pred CCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccCCCCCcHHHHHHHhCcHHHHHHHHhcC
Q 007741 73 HNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELLKYS 152 (591)
Q Consensus 73 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~ 152 (591)
.|.||||.|++.|+.++++.|++.. +..++.+|..|.||||+|+..|+.+++++|++++
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~---------------------g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~ 60 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFE---------------------GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAA 60 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTT---------------------CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhc---------------------CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 4789999999999999999999752 5668889999999999999999999999999987
Q ss_pred CCcc---CccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccC------------CCCCCCHHHHHHHcCCHHHHHHH
Q 007741 153 TKEG---LTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTT------------GPSNATPLVSAATRGHTAVVNEL 217 (591)
Q Consensus 153 ~~~~---~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~------------~~~g~tpL~~A~~~g~~~~v~~L 217 (591)
++.. ....|..|.||||+|+..|+.+++++|+++|+++.... +..|.||||+|+..|+.+++++|
T Consensus 61 ~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 140 (232)
T 2rfa_A 61 PELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLL 140 (232)
T ss_dssp GGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHH
T ss_pred chhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 6532 25567789999999999999999999999999874432 23799999999999999999999
Q ss_pred HhcCCCcceecCCCCCcHHHHHHHcCCHHHH----HHHHhcCcccc-----cccCCCCCcHHHHHHhCCCHHHHHHHHHc
Q 007741 218 LSKDGGLLEISRSNGKNALHFAARQGHVDVV----KALLSKDPQLA-----RRTDKKGQTALHMAVKGQSCEVVKLLLEA 288 (591)
Q Consensus 218 L~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v----~~Ll~~~~~~~-----~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ 288 (591)
+++ +.+++..|.+|.||||+|+..|+.+++ ++|++.+++.. +..|..|+||||+|++.|+.+++++|+++
T Consensus 141 l~~-ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~ 219 (232)
T 2rfa_A 141 IEH-GADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQK 219 (232)
T ss_dssp HHT-TCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHC-CCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 998 667888999999999999999999988 99999998764 57799999999999999999999999999
Q ss_pred Ccc
Q 007741 289 DAA 291 (591)
Q Consensus 289 ~~~ 291 (591)
|+.
T Consensus 220 g~~ 222 (232)
T 2rfa_A 220 RKH 222 (232)
T ss_dssp HHH
T ss_pred Ccc
Confidence 876
No 44
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=7.1e-32 Score=254.55 Aligned_cols=193 Identities=30% Similarity=0.368 Sum_probs=175.5
Q ss_pred CCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHH
Q 007741 126 NELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSA 205 (591)
Q Consensus 126 n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A 205 (591)
+..+.||||.|+..|+.+.++.|++.+. .+++..|..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A 79 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTT-YQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYA 79 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHH
Confidence 4568999999999999999999999754 356788889999999999999999999999999998 66788999999999
Q ss_pred HHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcC-cccccccCCCCCcHHHHHHhCCC-----H
Q 007741 206 ATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKD-PQLARRTDKKGQTALHMAVKGQS-----C 279 (591)
Q Consensus 206 ~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~-~~~~~~~d~~g~t~Lh~A~~~~~-----~ 279 (591)
+..|+.+++++|++..+..++..+..|.||||+|+..|+.+++++|++.+ .++ +..|..|+||||+|+..++ .
T Consensus 80 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~ 158 (201)
T 3hra_A 80 GAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDI-DFQNDFGYTALIEAVGLREGNQLYQ 158 (201)
T ss_dssp HHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCT-TCCCTTSCCHHHHHHHSSCCSHHHH
T ss_pred HHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc-CCCCCCCCCHHHHHHHhccchhhHH
Confidence 99999999999998878888888999999999999999999999999999 555 7789999999999999888 8
Q ss_pred HHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcC
Q 007741 280 EVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSL 322 (591)
Q Consensus 280 ~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~ 322 (591)
+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++
T Consensus 159 ~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 159 DIVKLLMENGAD-QSIKDNSGRTAMDYANQKGYTEISKILAQY 200 (201)
T ss_dssp HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHTC
T ss_pred HHHHHHHHCCCC-CCccCCCCCCHHHHHHHcCCHhHHHHHHhc
Confidence 999999999988 788999999999999999999999999984
No 45
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=1.2e-31 Score=253.02 Aligned_cols=194 Identities=26% Similarity=0.309 Sum_probs=177.5
Q ss_pred CCCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccCCCCCcHHHHHHHhCcHHHHHHHHhc
Q 007741 72 RHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELLKY 151 (591)
Q Consensus 72 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~ 151 (591)
..+.||||.|+..|+.+.++.|+... +..++..|..|.||||+|+..|+.+++++|+++
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~---------------------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 61 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDT---------------------TYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDR 61 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCT---------------------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred cccccHHHHHHHhccHHHHHHHHHcC---------------------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 45779999999999999999999763 346888999999999999999999999999998
Q ss_pred CCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCC
Q 007741 152 STKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSN 231 (591)
Q Consensus 152 ~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~ 231 (591)
|++ ++..+..|.||||+|+..|+.+++++|++.+....+..+..|.||||+|+..|+.+++++|+++++.+++..|..
T Consensus 62 g~~--~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 139 (201)
T 3hra_A 62 GAD--INLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDF 139 (201)
T ss_dssp TCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTT
T ss_pred CCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCC
Confidence 765 567888999999999999999999999965554447788899999999999999999999999976888999999
Q ss_pred CCcHHHHHHHcCC-----HHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcC
Q 007741 232 GKNALHFAARQGH-----VDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEAD 289 (591)
Q Consensus 232 g~tpLh~A~~~g~-----~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~ 289 (591)
|.||||+|+..++ .+++++|++.|+++ +..|..|+||||+|+..|+.+++++|+++|
T Consensus 140 g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 140 GYTALIEAVGLREGNQLYQDIVKLLMENGADQ-SIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp SCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCCHHHHHHHhccchhhHHHHHHHHHHCCCCC-CccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 9999999999998 99999999999998 777999999999999999999999999876
No 46
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.98 E-value=5.9e-33 Score=275.45 Aligned_cols=217 Identities=19% Similarity=0.253 Sum_probs=155.3
Q ss_pred cccccccCCCCCcHHHHHHHhCcHHHHHHHHhcCCC--ccCc----cCCCCCChHHHHHHHh---CcHHHHHHHHhCCCC
Q 007741 119 SSVVNEVNELGETALFTAADKGHIEVVNELLKYSTK--EGLT----RKNRSGFDPLHIAAVQ---GHHAIVQVLLDHDPS 189 (591)
Q Consensus 119 ~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~--~~~~----~~~~~g~t~Lh~A~~~---g~~~iv~~Ll~~~~~ 189 (591)
++..+..|..|.||||.|+..|+.++|+.|++.+.. .++. ..+..|+||||+|+.. |+.+++++|+++|++
T Consensus 3 ~a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~ 82 (273)
T 2pnn_A 3 SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARK 82 (273)
T ss_dssp --------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHH
T ss_pred cccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhcc
Confidence 344567799999999999999999999999985422 1222 3578899999999987 999999999998764
Q ss_pred Cc----------ccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCC--------------CCCcHHHHHHHcCCH
Q 007741 190 LS----------QTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRS--------------NGKNALHFAARQGHV 245 (591)
Q Consensus 190 ~~----------~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~--------------~g~tpLh~A~~~g~~ 245 (591)
.. ...|..|.||||+|+..|+.+++++|+++ +.+++..+. .|.||||+|+..|+.
T Consensus 83 ~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~ 161 (273)
T 2pnn_A 83 TDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVEN-GADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQL 161 (273)
T ss_dssp TTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCH
T ss_pred ccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcCccccccccccccccccccCCCCHHHHHHHcCCH
Confidence 31 12456788888888888888888888887 455565655 688888888888888
Q ss_pred HHHHHHHh---cCcccccccCCCCCcHHHHHHhCCC---------HHHHHHHHHcCcccc------cCCCCCCCcHHHHH
Q 007741 246 DVVKALLS---KDPQLARRTDKKGQTALHMAVKGQS---------CEVVKLLLEADAAIV------MLPDKFGNTALHVA 307 (591)
Q Consensus 246 ~~v~~Ll~---~~~~~~~~~d~~g~t~Lh~A~~~~~---------~~~v~~Ll~~~~~~~------~~~d~~g~T~Lh~A 307 (591)
+++++|++ .|+++ +.+|..|+||||+|+..|+ .+++++|+++|+++. +.+|..|+||||+|
T Consensus 162 ~~v~~Ll~~~~~gad~-~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A 240 (273)
T 2pnn_A 162 AIVKFLLQNSWQPADI-SARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALA 240 (273)
T ss_dssp HHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred HHHHHHHhcccCCCCc-eeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHH
Confidence 88888888 77777 5668888888888888777 688888888887732 35788888888888
Q ss_pred HHcCcHHHHHHHhcCCCC-CcccccCCCCCHH
Q 007741 308 TRKKRTEIVTELLSLPDT-NVNALTRDHKTAL 338 (591)
Q Consensus 308 ~~~g~~~iv~~Ll~~~g~-d~~~~d~~G~t~L 338 (591)
+..|+.+++++|+++ |+ |+......+.+|-
T Consensus 241 ~~~g~~~iv~~Ll~~-ga~dp~~~~~~~~~~~ 271 (273)
T 2pnn_A 241 ASSGKIGVLAYILQR-EIHEPECRHAAAHHHH 271 (273)
T ss_dssp HHTTCHHHHHHHHHH-HTC-------------
T ss_pred HHhChHHHHHHHHHC-CCCCchhhhhhhhhcc
Confidence 888888888888885 55 7777666665553
No 47
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=4.5e-32 Score=269.10 Aligned_cols=218 Identities=19% Similarity=0.227 Sum_probs=173.4
Q ss_pred hccCCCCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhccccc----ccCCCCCcHHHHHHHh---C
Q 007741 68 QVTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVN----EVNELGETALFTAADK---G 140 (591)
Q Consensus 68 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~n~~g~TpL~~Aa~~---g 140 (591)
+..+..|.||||.|++.|+.++|+.|++.... .+..++ ..|..|.||||+|+.. |
T Consensus 7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~------------------~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g 68 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSNCQELESLLPFLQR------------------SKKRLTDSEFKDPETGKTCLLKAMLNLHNG 68 (273)
T ss_dssp ----CCCHHHHHHHHHTTCSSTTTTHHHHHHH------------------SCCCTTSGGGSCTTTCCCHHHHHHHSCBTT
T ss_pred CCCCcccchHHHHHHHcCCHHHHHHHHHHHhh------------------cccccCCcccccCcCCCCHHHHHHHHHhcC
Confidence 34678899999999999999999999863110 022232 4588999999999987 9
Q ss_pred cHHHHHHHHhcCCCc---------cCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCC--------------C
Q 007741 141 HIEVVNELLKYSTKE---------GLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGP--------------S 197 (591)
Q Consensus 141 ~~~~v~~Ll~~~~~~---------~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~--------------~ 197 (591)
+.++|++|++++++. .....|..|.||||+|+..|+.+++++|+++|+++.. .+. .
T Consensus 69 ~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~~~~~~~~~~~~~~ 147 (273)
T 2pnn_A 69 QNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA-AANGDFFKKTKGRPGFYF 147 (273)
T ss_dssp BCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBCSGGGSSCSSSCCCCS
T ss_pred ChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc-cccccccccccccccccC
Confidence 999999999987542 1233567899999999999999999999999999844 443 7
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhc--CCCcceecCCCCCcHHHHHHHcCC---------HHHHHHHHhcCcccc------c
Q 007741 198 NATPLVSAATRGHTAVVNELLSK--DGGLLEISRSNGKNALHFAARQGH---------VDVVKALLSKDPQLA------R 260 (591)
Q Consensus 198 g~tpL~~A~~~g~~~~v~~LL~~--~~~~~~~~~~~g~tpLh~A~~~g~---------~~~v~~Ll~~~~~~~------~ 260 (591)
|.||||+|+..|+.+++++|++. .+.+++..|.+|.||||+|+..|+ .+++++|+++|+++. +
T Consensus 148 g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~ 227 (273)
T 2pnn_A 148 GELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEE 227 (273)
T ss_dssp CBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGG
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhccccccccc
Confidence 99999999999999999999994 477788899999999999999998 899999999999884 3
Q ss_pred ccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHH
Q 007741 261 RTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTAL 304 (591)
Q Consensus 261 ~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~L 304 (591)
..|..|+||||+|++.|+.+++++|+++|+..+......+.+|-
T Consensus 228 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~ 271 (273)
T 2pnn_A 228 ITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHH 271 (273)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC-------------
T ss_pred ccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhcc
Confidence 57999999999999999999999999999965776666666553
No 48
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=1.2e-31 Score=263.41 Aligned_cols=204 Identities=24% Similarity=0.280 Sum_probs=142.4
Q ss_pred CCcHhHHHHHcCCHHHHH----HHHcCCCcccccccCCCcchhHHHHhhcccccc----cCCCCCcHHHHHHHh---CcH
Q 007741 74 NDTELHLAAQRGDLGAVK----QILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNE----VNELGETALFTAADK---GHI 142 (591)
Q Consensus 74 g~t~Lh~Aa~~g~~~~v~----~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~n~~g~TpL~~Aa~~---g~~ 142 (591)
|.||||.|++.|+.+.++ +|++. +..++. .|..|.||||+|+.. |+.
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~----------------------g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~ 59 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWN----------------------SKYLTDSAYTEGSTGKTCLMKAVLNLQDGVN 59 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHH----------------------TCCTTSGGGSBTTTTBCHHHHHHHTCBTTBC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHc----------------------CCCcccccccCCCCCCCHHHHHHHccccchH
Confidence 679999999999998554 44443 556776 899999999999999 999
Q ss_pred HHHHHHHhcCCCccC---------ccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHH
Q 007741 143 EVVNELLKYSTKEGL---------TRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAV 213 (591)
Q Consensus 143 ~~v~~Ll~~~~~~~~---------~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~ 213 (591)
++|++|++++++.+. ...|..|.||||+|+..|+.+++++|+++|+++. ..+..+.+
T Consensus 60 ~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~------------- 125 (256)
T 2etb_A 60 ACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVH-LRACGRFF------------- 125 (256)
T ss_dssp TTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCCSGGG-------------
T ss_pred HHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cccccccc-------------
Confidence 999999998765431 1245679999999999999999999999998873 34433210
Q ss_pred HHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHh---cCcccccccCCCCCcHHHHHHh--CCCHH-------H
Q 007741 214 VNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLS---KDPQLARRTDKKGQTALHMAVK--GQSCE-------V 281 (591)
Q Consensus 214 v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~---~~~~~~~~~d~~g~t~Lh~A~~--~~~~~-------~ 281 (591)
.......+..|.||||+|+..|+.+++++|++ .|+++ +..|..|+||||+|+. .++.+ +
T Consensus 126 --------~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~-n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~i 196 (256)
T 2etb_A 126 --------QKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASL-EATDSLGNTVLHALVMIADNSPENSALVIHM 196 (256)
T ss_dssp --------SCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHH
T ss_pred --------cccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCc-CccCCCCCCHHHHHHHcccCCchhhHHHHHH
Confidence 01112223346666666666666666666666 56655 4556666666666665 55655 6
Q ss_pred HHHHHHcCcccc------cCCCCCCCcHHHHHHHcCcHHHHHHHhcC
Q 007741 282 VKLLLEADAAIV------MLPDKFGNTALHVATRKKRTEIVTELLSL 322 (591)
Q Consensus 282 v~~Ll~~~~~~~------~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~ 322 (591)
+++|+++|+++. +.+|..|+||||+|+..|+.+++++|+++
T Consensus 197 v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 243 (256)
T 2etb_A 197 YDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQR 243 (256)
T ss_dssp HHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhC
Confidence 666666666521 56666677777777777777777776663
No 49
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=2.3e-31 Score=261.26 Aligned_cols=205 Identities=24% Similarity=0.276 Sum_probs=158.6
Q ss_pred CCCcHHHHHHHhCcHH----HHHHHHhcCCCccCcc----CCCCCChHHHHHHHh---CcHHHHHHHHhCCCCCcccCCC
Q 007741 128 LGETALFTAADKGHIE----VVNELLKYSTKEGLTR----KNRSGFDPLHIAAVQ---GHHAIVQVLLDHDPSLSQTTGP 196 (591)
Q Consensus 128 ~g~TpL~~Aa~~g~~~----~v~~Ll~~~~~~~~~~----~~~~g~t~Lh~A~~~---g~~~iv~~Ll~~~~~~~~~~~~ 196 (591)
.|+||||.|+..|+.+ ++++|++.+.+ ++. .|..|+||||+|+.. |+.+++++|+++|++......
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~--i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~- 77 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKY--LTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKP- 77 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCC--TTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSC-
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCC--cccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhh-
Confidence 3678888888888886 45566665543 344 677788888888888 888888888887766532110
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCC-----------
Q 007741 197 SNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKK----------- 265 (591)
Q Consensus 197 ~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~----------- 265 (591)
++.. .....|..|.||||+|+..|+.+++++|+++|+++ +..|..
T Consensus 78 --------------------~~~~---~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~ 133 (256)
T 2etb_A 78 --------------------LVNA---QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV-HLRACGRFFQKHQGTCF 133 (256)
T ss_dssp --------------------GGGC---CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCSSSCC
T ss_pred --------------------hccc---ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC-Ccccccccccccccccc
Confidence 0000 01123455677777777777777777777776666 333443
Q ss_pred --CCcHHHHHHhCCCHHHHHHHHH---cCcccccCCCCCCCcHHHHHHH--cCcHH-------HHHHHhcCCCCCc----
Q 007741 266 --GQTALHMAVKGQSCEVVKLLLE---ADAAIVMLPDKFGNTALHVATR--KKRTE-------IVTELLSLPDTNV---- 327 (591)
Q Consensus 266 --g~t~Lh~A~~~~~~~~v~~Ll~---~~~~~~~~~d~~g~T~Lh~A~~--~g~~~-------iv~~Ll~~~g~d~---- 327 (591)
|+||||+|+..|+.+++++|++ +|++ ++.+|..|+||||+|+. .++.+ ++++|++. |+++
T Consensus 134 ~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~-~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~-ga~~~~~~ 211 (256)
T 2etb_A 134 YFGELPLSLAACTKQWDVVTYLLENPHQPAS-LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQM-GARLCPTV 211 (256)
T ss_dssp CSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH-HHHHSTTC
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhccccCCC-cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHc-CCCccccc
Confidence 9999999999999999999999 8888 89999999999999999 88888 99999994 9999
Q ss_pred ---ccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCcccc
Q 007741 328 ---NALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVRA 365 (591)
Q Consensus 328 ---~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~~ 365 (591)
+.+|..|+||||+|+..+ +.+++++|+++|+...
T Consensus 212 ~~~~~~d~~g~tpL~~A~~~g----~~~~v~~Ll~~g~~~~ 248 (256)
T 2etb_A 212 QLEEISNHQGLTPLKLAAKEG----KIEIFRHILQREFSGA 248 (256)
T ss_dssp CGGGCCCTTSCCHHHHHHHTT----CHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCCHHHHHHHhC----CHHHHHHHHhCCCCCC
Confidence 999999999999999999 8999999999998754
No 50
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=3.4e-31 Score=260.64 Aligned_cols=201 Identities=20% Similarity=0.222 Sum_probs=127.6
Q ss_pred CCCCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhccccccc----CCCCCcHHHHHH---HhCcHH
Q 007741 71 GRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEV----NELGETALFTAA---DKGHIE 143 (591)
Q Consensus 71 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----n~~g~TpL~~Aa---~~g~~~ 143 (591)
+..|.++||.|++.|+.+.++.|++... ..+..++.. |..|.||||+|+ ..|+.+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~------------------~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~ 63 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLL------------------THKKRLTDEEFREPSTGKTCLPKALLNLSAGRND 63 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHH------------------HHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCT
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHH------------------hcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHH
Confidence 4567899999999999997777765100 003344433 477999999999 779999
Q ss_pred HHHHHHhcCCC---------ccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCC--------------CCCCC
Q 007741 144 VVNELLKYSTK---------EGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTG--------------PSNAT 200 (591)
Q Consensus 144 ~v~~Ll~~~~~---------~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~--------------~~g~t 200 (591)
+|++|++.+++ ......|..|+||||+|+..|+.+++++|+++|+++. ..+ ..|.|
T Consensus 64 ~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~~g~t 142 (260)
T 3jxi_A 64 TIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH-AQARGRFFQPKDEGGYFYFGEL 142 (260)
T ss_dssp HHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCEECCCSSSCCCCSCCSCSS
T ss_pred HHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcC-ccccccccCcccccccccCCCC
Confidence 99999998753 2344556689999999999999999999999998874 333 34555
Q ss_pred HHHHHHHcCCHHHHHHHHhc--CCCcceecCCCCCcHHHHHHHcCC---------HHHHHHHHhcCcccc------cccC
Q 007741 201 PLVSAATRGHTAVVNELLSK--DGGLLEISRSNGKNALHFAARQGH---------VDVVKALLSKDPQLA------RRTD 263 (591)
Q Consensus 201 pL~~A~~~g~~~~v~~LL~~--~~~~~~~~~~~g~tpLh~A~~~g~---------~~~v~~Ll~~~~~~~------~~~d 263 (591)
|||+|+..|+.+++++|++. .+.+++..|..|.||||+|+..|+ .+++++|+++|+++. +..|
T Consensus 143 pL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d 222 (260)
T 3jxi_A 143 PLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLN 222 (260)
T ss_dssp HHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCC
T ss_pred HHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhccc
Confidence 55555555555555555552 234444445555555555554444 345555555544432 2334
Q ss_pred CCCCcHHHHHHhCCCHHHHHHHHHcCc
Q 007741 264 KKGQTALHMAVKGQSCEVVKLLLEADA 290 (591)
Q Consensus 264 ~~g~t~Lh~A~~~~~~~~v~~Ll~~~~ 290 (591)
..|+||||+|++.|+.+++++|+++|+
T Consensus 223 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 249 (260)
T 3jxi_A 223 NDGLSPLMMAAKTGKIGIFQHIIRREI 249 (260)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 444455555544444445544444443
No 51
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=6.3e-30 Score=234.09 Aligned_cols=157 Identities=35% Similarity=0.473 Sum_probs=86.0
Q ss_pred HHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHH
Q 007741 167 PLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVD 246 (591)
Q Consensus 167 ~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~ 246 (591)
+|+.||..|+.++|+.|+++|+++ +..|..|.||||+|+..++.+++++|+++ +.+++..|.+|.||||+|+..|+.+
T Consensus 7 ~L~~Aa~~G~~~~v~~Ll~~Gadv-n~~d~~g~t~l~~a~~~~~~~~~~~ll~~-gad~~~~d~~g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 7 RLIEAAENGNKDRVKDLIENGADV-NASDSDGRTPLHHAAENGHKEVVKLLISK-GADVNAKDSDGRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhc-ccchhhhccCCCCHHHHHHHcCCHH
Confidence 444455555555555555555444 33444455555555555555555555544 3334445555666666666666666
Q ss_pred HHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCCC
Q 007741 247 VVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTN 326 (591)
Q Consensus 247 ~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d 326 (591)
++++|+++|+++ +.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|++.|+.+++++|++ .|++
T Consensus 85 ~v~~Ll~~gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~-~GA~ 161 (169)
T 4gpm_A 85 VVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNTSDSDGRTPLDLAREHGNEEVVKLLEK-QGGW 161 (169)
T ss_dssp HHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHT-C---
T ss_pred HHHHHHHCcCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHH-CCCC
Confidence 666666666655 44566666666666666666666666666665 55566666666666666666666666666 3555
Q ss_pred cc
Q 007741 327 VN 328 (591)
Q Consensus 327 ~~ 328 (591)
++
T Consensus 162 ie 163 (169)
T 4gpm_A 162 LE 163 (169)
T ss_dssp --
T ss_pred cC
Confidence 54
No 52
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=2e-29 Score=230.81 Aligned_cols=157 Identities=34% Similarity=0.548 Sum_probs=144.8
Q ss_pred cHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCC
Q 007741 131 TALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGH 210 (591)
Q Consensus 131 TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~ 210 (591)
++|+.||+.|+.++|++||++|++ ++.+|..|+||||+|+..++.+++++|+++|+++ +..|..|.||||+|+..|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gad--vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGAD--VNASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGH 82 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC--CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCC
Confidence 479999999999999999998765 5778999999999999999999999999999998 6788999999999999999
Q ss_pred HHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCc
Q 007741 211 TAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADA 290 (591)
Q Consensus 211 ~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~ 290 (591)
.+++++|+++ +.+++.+|.+|+||||+|+..|+.+++++|++.|+++ +.+|..|+||||+|++.|+.+++++|+++|+
T Consensus 83 ~~~v~~Ll~~-gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 160 (169)
T 4gpm_A 83 KEVVKLLISK-GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADV-NTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160 (169)
T ss_dssp HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHTC--
T ss_pred HHHHHHHHHC-cCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 9999999998 5668889999999999999999999999999999998 6779999999999999999999999999999
Q ss_pred cc
Q 007741 291 AI 292 (591)
Q Consensus 291 ~~ 292 (591)
++
T Consensus 161 ~i 162 (169)
T 4gpm_A 161 WL 162 (169)
T ss_dssp --
T ss_pred Cc
Confidence 84
No 53
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=3.5e-31 Score=269.86 Aligned_cols=257 Identities=14% Similarity=0.056 Sum_probs=198.1
Q ss_pred CCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccCCCCCcHHHHHHHhCcHHHHHHHHhcCC
Q 007741 74 NDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELLKYST 153 (591)
Q Consensus 74 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~ 153 (591)
+.+|+|. ...+++++|++. ++.++..|..|.|+++ |+.++|++|+++|.
T Consensus 23 ~~~~~~~----~~~dlv~~ll~~----------------------ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~ 71 (327)
T 1sw6_A 23 TAGPIIT----FTHDLTSDFLSS----------------------PLKIMKALPSPVVNDN-----EQKMKLEAFLQRLL 71 (327)
T ss_dssp --CCEEE----CCTTCCCSTTTS----------------------SCCCEECBCCCCCCCH-----HHHHHHHHHHHHHH
T ss_pred cccchhh----hcCchHHHHhhC----------------------CcccccCCCCCCcccC-----chhHHHHHHHHhcc
Confidence 3355552 445668888876 7789999999999987 99999999999886
Q ss_pred CccCcc---------------CCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 007741 154 KEGLTR---------------KNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELL 218 (591)
Q Consensus 154 ~~~~~~---------------~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL 218 (591)
+++... ......+.+|+|+..+..++++.|++.+.+++...|..|.||||+|+..|+.+++++|+
T Consensus 72 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll 151 (327)
T 1sw6_A 72 FPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLV 151 (327)
T ss_dssp C-------------------------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred CCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 543210 01112234588999999999999999999985548999999999999999999999999
Q ss_pred hcCCCcceecCCCCCcHHHHHHHcCC---HHHHHHHHhcCcccccccCCCCCcHHHHHHh----CCCHHHHHHHHHc---
Q 007741 219 SKDGGLLEISRSNGKNALHFAARQGH---VDVVKALLSKDPQLARRTDKKGQTALHMAVK----GQSCEVVKLLLEA--- 288 (591)
Q Consensus 219 ~~~~~~~~~~~~~g~tpLh~A~~~g~---~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~----~~~~~~v~~Ll~~--- 288 (591)
++ +.+++..|.+|.||||+|+..|+ .++++.|++.+....+..|..|+||||+|+. .|+.+++++|++.
T Consensus 152 ~~-Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~ 230 (327)
T 1sw6_A 152 KH-GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMG 230 (327)
T ss_dssp HT-TCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHH
T ss_pred Hc-CCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHH
Confidence 98 56778899999999999999998 7888888888744347889999999999999 9999999999987
Q ss_pred -----------------CcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhH
Q 007741 289 -----------------DAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEAS 351 (591)
Q Consensus 289 -----------------~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~ 351 (591)
+++ ++.+|..|.||||.|+. +++|++. +++.+|..|+||||+|+..+ +.
T Consensus 231 ~~~~~~~~~i~~~~~~~g~~-~~~~~~~g~t~L~~a~~------~~~Ll~~---~~n~~d~~G~TpLh~A~~~g----~~ 296 (327)
T 1sw6_A 231 WIVKKQNRPIQSGTNEKESK-PNDKNGERKDSILENLD------LKWIIAN---MLNAQDSNGDTCLNIAARLG----NI 296 (327)
T ss_dssp HHHHGGGCCEEEC-----------------CHHHHHCS------HHHHHHH---TTTCCCTTSCCHHHHHHHHC----CH
T ss_pred HHhcccchHHHhhhhcccCC-cccccccCCChhHHHHH------HHHHHHh---CCCCCCCCCCCHHHHHHHcC----CH
Confidence 555 78889999999999985 8888885 69999999999999999999 89
Q ss_pred HHHHHHHhcCcccccccCCchHHhh
Q 007741 352 EIKDCLARCGAVRANELNQPRDELR 376 (591)
Q Consensus 352 ~i~~~L~~~ga~~~~~~~~~~~~l~ 376 (591)
+++++|+++|++..........++.
T Consensus 297 ~~v~~Ll~~Gad~~~~d~~G~TpL~ 321 (327)
T 1sw6_A 297 SIVDALLDYGADPFIANKSGLRPVD 321 (327)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCGGG
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHH
Confidence 9999999999987666555554443
No 54
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=3.6e-30 Score=253.33 Aligned_cols=208 Identities=21% Similarity=0.224 Sum_probs=122.1
Q ss_pred CCCCCcHHHHHHHhCcHHHHHHHHh----cCCCccCcc--CCCCCChHHHHHH---HhCcHHHHHHHHhCCCCCcccCCC
Q 007741 126 NELGETALFTAADKGHIEVVNELLK----YSTKEGLTR--KNRSGFDPLHIAA---VQGHHAIVQVLLDHDPSLSQTTGP 196 (591)
Q Consensus 126 n~~g~TpL~~Aa~~g~~~~v~~Ll~----~~~~~~~~~--~~~~g~t~Lh~A~---~~g~~~iv~~Ll~~~~~~~~~~~~ 196 (591)
|..|+|+||.|++.|+.+.++.|++ .+...+... .+..|.||||+|+ ..|+.+++++|++.+++....
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~--- 78 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNM--- 78 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCH---
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccch---
Confidence 5678899999999999985554444 665433221 2366889999888 678999999999876543110
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccC-------------
Q 007741 197 SNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTD------------- 263 (591)
Q Consensus 197 ~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d------------- 263 (591)
..++ .......|..|.||||+|+..|+.+++++|++.|+++ +..|
T Consensus 79 ------------------~~~~---~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~ 136 (260)
T 3jxi_A 79 ------------------REFI---NSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADV-HAQARGRFFQPKDEGGY 136 (260)
T ss_dssp ------------------HHHH---TCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCEECCCSSSCCCCS
T ss_pred ------------------Hhhh---cccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCc-CccccccccCccccccc
Confidence 0011 1112223334555555555555555555555555554 2223
Q ss_pred -CCCCcHHHHHHhCCCHHHHHHHHH---cCcccccCCCCCCCcHHHHHHHcCc---------HHHHHHHhcCCCCCc---
Q 007741 264 -KKGQTALHMAVKGQSCEVVKLLLE---ADAAIVMLPDKFGNTALHVATRKKR---------TEIVTELLSLPDTNV--- 327 (591)
Q Consensus 264 -~~g~t~Lh~A~~~~~~~~v~~Ll~---~~~~~~~~~d~~g~T~Lh~A~~~g~---------~~iv~~Ll~~~g~d~--- 327 (591)
..|+||||+|+..|+.+++++|++ .|++ ++.+|..|+||||+|+..++ .+++++|++ .|+++
T Consensus 137 ~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~-~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~-~ga~~~~~ 214 (260)
T 3jxi_A 137 FYFGELPLSLAACTNQPHIVHYLTENGHKQAD-LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLI-KCAKLFPD 214 (260)
T ss_dssp CCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHH-HHHHHCTT
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHhccccCCC-CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHH-hCcccccc
Confidence 356666666666666666666666 5555 55556666666666665554 456666665 35555
Q ss_pred ----ccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCccc
Q 007741 328 ----NALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVR 364 (591)
Q Consensus 328 ----~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~ 364 (591)
+.+|..|+||||+|+..+ +.+++++|+++|+..
T Consensus 215 ~~~~~~~d~~g~tpL~~A~~~g----~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 215 TNLEALLNNDGLSPLMMAAKTG----KIGIFQHIIRREIAD 251 (260)
T ss_dssp CCGGGCCCTTSCCHHHHHHHTT----CHHHHHHHHHHHHHH
T ss_pred cchhhcccCCCCCHHHHHHHcC----CHHHHHHHHHhCCCc
Confidence 456666666666666665 556666666665543
No 55
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=4.1e-30 Score=255.44 Aligned_cols=193 Identities=25% Similarity=0.319 Sum_probs=164.9
Q ss_pred CCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHH--
Q 007741 129 GETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAA-- 206 (591)
Q Consensus 129 g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~-- 206 (591)
+.+++|.|+..|+.+.++.|++.+.+..++..|..|+||||+|+..|+.+++++|++.|+...+..+..|.||||+|+
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~ 155 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALA 155 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGC
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHH
Confidence 467889999999999999998876665678889999999999999999999999999998444778888999999998
Q ss_pred ---HcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHH
Q 007741 207 ---TRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVK 283 (591)
Q Consensus 207 ---~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~ 283 (591)
..++.+++++|++.+ ......+..|.||||+|+..|+.+++++|++.|+++ +..|..|+||||+|+..|+.++++
T Consensus 156 ~~~~~~~~~~v~~Ll~~g-~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~-n~~d~~G~TpLh~A~~~g~~~iv~ 233 (276)
T 4hbd_A 156 TLKTQDDIETVLQLFRLG-NINAKASQAGQTALMLAVSHGRVDVVKALLACEADV-NVQDDDGSTALMCACEHGHKEIAG 233 (276)
T ss_dssp CCCSHHHHHHHHHHHHHS-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HhhhhhhHHHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHCCCHHHHH
Confidence 667888999888884 555667788899999999999999999999998887 667888999999999999999999
Q ss_pred HHHH-cCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCC
Q 007741 284 LLLE-ADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPD 324 (591)
Q Consensus 284 ~Ll~-~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g 324 (591)
+|++ .|++ ++.+|..|+||||+|+..|+.+++++|+++.+
T Consensus 234 ~Ll~~~gad-~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 234 LLLAVPSCD-ISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp HHHTSTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred HHHhcCCCC-CcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 9998 6776 78888889999999999999999998887644
No 56
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=6.8e-29 Score=246.61 Aligned_cols=192 Identities=26% Similarity=0.282 Sum_probs=176.4
Q ss_pred ChHHHHHHHhCcHHHHHHHHhCCCC-CcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHH---
Q 007741 165 FDPLHIAAVQGHHAIVQVLLDHDPS-LSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAA--- 240 (591)
Q Consensus 165 ~t~Lh~A~~~g~~~iv~~Ll~~~~~-~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~--- 240 (591)
++++|.|+..|+.+.++.+++.+.+ ..+..|..|.||||+|+..|+.+++++|++.+..+++..+..|.||||+|+
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~ 156 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALAT 156 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCC
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHH
Confidence 4688999999999999999887554 135678899999999999999999999999977688899999999999999
Q ss_pred --HcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHH
Q 007741 241 --RQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTE 318 (591)
Q Consensus 241 --~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~ 318 (591)
..++.+++++|++.+... +..|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..|+.+++++
T Consensus 157 ~~~~~~~~~v~~Ll~~g~~~-~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad-~n~~d~~G~TpLh~A~~~g~~~iv~~ 234 (276)
T 4hbd_A 157 LKTQDDIETVLQLFRLGNIN-AKASQAGQTALMLAVSHGRVDVVKALLACEAD-VNVQDDDGSTALMCACEHGHKEIAGL 234 (276)
T ss_dssp CCSHHHHHHHHHHHHHSCTT-CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred hhhhhhHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHH
Confidence 668999999999999776 66788999999999999999999999999998 89999999999999999999999999
Q ss_pred HhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCc
Q 007741 319 LLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGA 362 (591)
Q Consensus 319 Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga 362 (591)
|++..|+|++.+|..|+||||+|+..+ +.+++++|++++.
T Consensus 235 Ll~~~gad~~~~d~~g~TpL~~A~~~g----~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 235 LLAVPSCDISLTDRDGSTALMVALDAG----QSEIASMLYSRMN 274 (276)
T ss_dssp HHTSTTCCTTCCCTTSCCHHHHHHHHT----CHHHHHHHHHHCC
T ss_pred HHhcCCCCCcCcCCCCCCHHHHHHHcC----CHHHHHHHHhccC
Confidence 999679999999999999999999999 8999999987653
No 57
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=2.5e-28 Score=224.40 Aligned_cols=168 Identities=23% Similarity=0.236 Sum_probs=79.4
Q ss_pred hHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCH
Q 007741 166 DPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHV 245 (591)
Q Consensus 166 t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~ 245 (591)
||||.|+..|+.++++.|++.++...+..+..|.||||+|+..|+.+++++|+++ +.+++..+..|.||||+|+..|+.
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~ 82 (172)
T 3v30_A 4 LSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEW-GADPHILAKERESALSLASTGGYT 82 (172)
T ss_dssp CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred hhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCchhhcccCCCHHHHHHHCCCH
Confidence 3444444444444444444444332233334444444444444444444444433 222333444455555555555555
Q ss_pred HHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCC
Q 007741 246 DVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDT 325 (591)
Q Consensus 246 ~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~ 325 (591)
+++++|+++++++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++ ++
T Consensus 83 ~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~-~~ 159 (172)
T 3v30_A 83 DIVGLLLERDVDI-NIYDWNGGTPLLYAVRGNHVKCVEALLARGAD-LTTEADSGYTPMDLAVALGYRKVQQVIENH-IL 159 (172)
T ss_dssp HHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHH-HH
T ss_pred HHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHhCcHHHHHHHHHH-HH
Confidence 5555555555554 34455555555555555555555555555555 455555555555555555555555555552 55
Q ss_pred CcccccCCCCCH
Q 007741 326 NVNALTRDHKTA 337 (591)
Q Consensus 326 d~~~~d~~G~t~ 337 (591)
++...|..|.||
T Consensus 160 ~~~~~~~~~~~p 171 (172)
T 3v30_A 160 KLFQSNLVPADP 171 (172)
T ss_dssp HHSCC-------
T ss_pred HHhcccCCCCCC
Confidence 555555555544
No 58
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=6.6e-28 Score=225.81 Aligned_cols=166 Identities=25% Similarity=0.268 Sum_probs=129.9
Q ss_pred cccccccCCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCC
Q 007741 119 SSVVNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSN 198 (591)
Q Consensus 119 ~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g 198 (591)
..+++.+|..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|+++++++ +..|..|
T Consensus 25 ~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g 101 (192)
T 2rfm_A 25 DFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDK--LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSG 101 (192)
T ss_dssp HHHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTS
T ss_pred HHHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccc--cccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCC
Confidence 455778888999999999999999999999987654 5667788899999999999999999999888876 5566777
Q ss_pred CCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCC
Q 007741 199 ATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQS 278 (591)
Q Consensus 199 ~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~ 278 (591)
.||||+|+..|+.+++++|+++ +.+++..|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+
T Consensus 102 ~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~ 179 (192)
T 2rfm_A 102 KTPLMWSIIFGYSEMSYFLLEH-GANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADI-SARDLTGLTAEASARIFGR 179 (192)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHT-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTC
T ss_pred CcHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhCc
Confidence 8888888888888888877776 4556666777777777777777777777777777776 5557777777777777777
Q ss_pred HHHHHHHHHcC
Q 007741 279 CEVVKLLLEAD 289 (591)
Q Consensus 279 ~~~v~~Ll~~~ 289 (591)
.+++++|++.+
T Consensus 180 ~~~v~~Ll~~~ 190 (192)
T 2rfm_A 180 QEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhcc
Confidence 77777777654
No 59
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=1.2e-27 Score=219.70 Aligned_cols=170 Identities=23% Similarity=0.319 Sum_probs=149.4
Q ss_pred CCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHc
Q 007741 129 GETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATR 208 (591)
Q Consensus 129 g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~ 208 (591)
+.||||.|+..|+.+++++|++.+.. .++..+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 79 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDN-LVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTG 79 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSG-GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcc-cccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHC
Confidence 56899999999999999999997643 36778899999999999999999999999999987 66788999999999999
Q ss_pred CCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHc
Q 007741 209 GHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEA 288 (591)
Q Consensus 209 g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ 288 (591)
|+.+++++|+++ +.+++..|..|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++
T Consensus 80 ~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (172)
T 3v30_A 80 GYTDIVGLLLER-DVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADL-TTEADSGYTPMDLAVALGYRKVQQVIENH 157 (172)
T ss_dssp TCHHHHHHHHTT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHhCcHHHHHHHHHH
Confidence 999999999988 5667888999999999999999999999999999998 67799999999999999999999999999
Q ss_pred CcccccCCCCCCCcH
Q 007741 289 DAAIVMLPDKFGNTA 303 (591)
Q Consensus 289 ~~~~~~~~d~~g~T~ 303 (591)
+++ ....+..|.||
T Consensus 158 ~~~-~~~~~~~~~~p 171 (172)
T 3v30_A 158 ILK-LFQSNLVPADP 171 (172)
T ss_dssp HHH-HSCC-------
T ss_pred HHH-HhcccCCCCCC
Confidence 988 66667777776
No 60
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=1.4e-30 Score=268.62 Aligned_cols=236 Identities=21% Similarity=0.213 Sum_probs=159.4
Q ss_pred CCCCCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccCCCCCcHHHHHHHhCcHHHHHHHHh
Q 007741 71 GRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELLK 150 (591)
Q Consensus 71 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~ 150 (591)
+.++.||||.||+.|+.++|++|++...+ ....+..|..|.||||+||..|+.++|++|++
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~-------------------~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~ 149 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTS-------------------DEIVKVIQAENYQAFRLAAENGHLHVLNRLCE 149 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--C-------------------CSSCC--CHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCc-------------------HHHHHHhccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 45566999999999999999999876321 11223445567889999999999999999999
Q ss_pred cCCCc---cCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcc-cCCCCCCCHHHHHH-HcCCHHHHHHHHhcCCCcc
Q 007741 151 YSTKE---GLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQ-TTGPSNATPLVSAA-TRGHTAVVNELLSKDGGLL 225 (591)
Q Consensus 151 ~~~~~---~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~-~~~~~g~tpL~~A~-~~g~~~~v~~LL~~~~~~~ 225 (591)
+|++. ++...+ .||||+|+..|+.+++++|+++|+++.. ..|..|.||||+|+ ..|+.+++++|++++ .
T Consensus 150 ~gad~~~~~i~~~~---~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~g-a-- 223 (376)
T 2aja_A 150 LAPTEIMAMIQAEN---YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP-V-- 223 (376)
T ss_dssp SCTTTHHHHHSHHH---HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH-H--
T ss_pred CCCCccccccCCCC---CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCC-C--
Confidence 87541 222222 7899999999999999999999887632 25667889999999 999999999998753 1
Q ss_pred eecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHH-------------------------
Q 007741 226 EISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCE------------------------- 280 (591)
Q Consensus 226 ~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~------------------------- 280 (591)
.|.||||.|+..|+.+++++|++.++++. ..| ++++.|+.+|+.+
T Consensus 224 -----~~~taL~~Aa~~g~~evv~lL~~~ga~~~-~~~----~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~ 293 (376)
T 2aja_A 224 -----MLAYAEIHEFEYGEKYVNPFIARHVNRLK-EMH----DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVL 293 (376)
T ss_dssp -----HHHHHHHCTTTTTTTTHHHHHHHHHHHHH-HHH----TTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGG
T ss_pred -----ccchHHHHHHHCCCHHHHHHHHhcCcccc-ccc----HHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhH
Confidence 27889999999999999999998887763 222 2445555555443
Q ss_pred --HHHHHHHcCcc--c--ccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCC
Q 007741 281 --VVKLLLEADAA--I--VMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLP 345 (591)
Q Consensus 281 --~v~~Ll~~~~~--~--~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~ 345 (591)
.+++|++.+.. . .....+.++||||+|+..|+.+++++|++. ...++..|+|++++|...+
T Consensus 294 ~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~----~~v~~~~~~~~~~~~~~~~ 360 (376)
T 2aja_A 294 LDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSI----PSVLALTKANNYYINETGG 360 (376)
T ss_dssp HHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTS----HHHHHSCC-----------
T ss_pred HHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcC----hHHHHHHHHhccccccccc
Confidence 33344432110 0 112234577889999999999999999874 3677888889988888777
No 61
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=2e-27 Score=222.56 Aligned_cols=161 Identities=24% Similarity=0.297 Sum_probs=131.6
Q ss_pred ccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHH
Q 007741 158 TRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALH 237 (591)
Q Consensus 158 ~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh 237 (591)
+.+|..|+||||+|+..|+.+++++|+++++++ +..+..|.||||+|+..|+.+++++|+++ +.+++..|..|.||||
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~ 106 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNRLGIAEKLLSK-GSNVNTKDFSGKTPLM 106 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTSCCHHH
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHH
Confidence 456778889999999999999999999888876 55677788888888888888888888887 4556677788888888
Q ss_pred HHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHH
Q 007741 238 FAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVT 317 (591)
Q Consensus 238 ~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~ 317 (591)
+|+..|+.+++++|++.++++ +..|..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.++++
T Consensus 107 ~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~v~ 184 (192)
T 2rfm_A 107 WSIIFGYSEMSYFLLEHGANV-NDRNLEGETPLIVASKYGRSEIVKKLLELGAD-ISARDLTGLTAEASARIFGRQEVIK 184 (192)
T ss_dssp HHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhCcHHHHH
Confidence 888888888888888888877 56678888888888888888888888888877 7777888888888888888888888
Q ss_pred HHhcC
Q 007741 318 ELLSL 322 (591)
Q Consensus 318 ~Ll~~ 322 (591)
+|++.
T Consensus 185 ~Ll~~ 189 (192)
T 2rfm_A 185 IFTEV 189 (192)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88763
No 62
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=2.4e-27 Score=215.39 Aligned_cols=152 Identities=26% Similarity=0.359 Sum_probs=84.4
Q ss_pred hHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCH
Q 007741 166 DPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHV 245 (591)
Q Consensus 166 t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~ 245 (591)
||||.|+..|+.+++++|+++++++ +..+..|.||||+|+. |+.+++++|+++ +.+++..+..|.||||+|+..|+.
T Consensus 7 ~~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~ 83 (162)
T 1ihb_A 7 NELASAAARGDLEQLTSLLQNNVNV-NAQNGFGRTALQVMKL-GNPEIARRLLLR-GANPDLKDRTGFAVIHDAARAGFL 83 (162)
T ss_dssp HHHHHHHHHTCHHHHHHHTTSCCCT-TCCCTTSCCHHHHCCS-SCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred hHHHHHHHcCCHHHHHHHHhCCCCc-cccCccCccHHHHHHc-CcHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCH
Confidence 4555555555555555555544444 3334445555555444 555555555544 233444455555556666555566
Q ss_pred HHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhc
Q 007741 246 DVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLS 321 (591)
Q Consensus 246 ~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~ 321 (591)
+++++|+++++++ +..|..|+||||+|+..|+.+++++|+++|++.++.+|..|+||||+|+..|+.+++++|++
T Consensus 84 ~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 158 (162)
T 1ihb_A 84 DTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQA 158 (162)
T ss_dssp HHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 6666666555555 44455666666666666666666666666655455566666666666666666666666665
No 63
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=2.5e-27 Score=215.19 Aligned_cols=155 Identities=26% Similarity=0.350 Sum_probs=70.9
Q ss_pred cHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCC
Q 007741 131 TALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGH 210 (591)
Q Consensus 131 TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~ 210 (591)
||||.|+..|+.+++++|++++.+ ++..+..|+||||+|+. |+.+++++|+++++++ +..+..|.||||+|+..|+
T Consensus 7 ~~L~~A~~~g~~~~v~~Ll~~~~~--~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 7 NELASAAARGDLEQLTSLLQNNVN--VNAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAARAGF 82 (162)
T ss_dssp HHHHHHHHHTCHHHHHHHTTSCCC--TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTC
T ss_pred hHHHHHHHcCCHHHHHHHHhCCCC--ccccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCC
Confidence 444444444444444444443322 23334444444444444 4444444444444443 2333444444444444444
Q ss_pred HHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCc
Q 007741 211 TAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADA 290 (591)
Q Consensus 211 ~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~ 290 (591)
.+++++|+++ +.+++..|.+|.||||+|+..|+.+++++|++++++..+..|..|+||||+|+..|+.+++++|+++|+
T Consensus 83 ~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 83 LDTLQTLLEF-QADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred HHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 4444444443 233334444455555555555555555555555444334445555555555555555555555555544
No 64
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=5.6e-27 Score=214.23 Aligned_cols=159 Identities=23% Similarity=0.307 Sum_probs=119.2
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHH
Q 007741 128 LGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAAT 207 (591)
Q Consensus 128 ~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 207 (591)
.|.||||.|+..|+.+++++|++.+.. ++..|..|.||||+|+..|+.+++++|+++++++ +..+..|.||||+|+.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 78 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV--INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACS 78 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC--cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHH
Confidence 467888888888888888888887533 5667778888888888888888888888887776 4556677777777777
Q ss_pred cCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHH
Q 007741 208 RGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLE 287 (591)
Q Consensus 208 ~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~ 287 (591)
.|+.+++++|+++ +.+++..|..|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|++
T Consensus 79 ~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (167)
T 3v31_A 79 KGYTDIVKMLLDC-GVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADP-TIETDSGYNSMDLAVALGYRSVQQVIES 156 (167)
T ss_dssp HTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHC-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 7777777777776 4445666777777777777777777777777777766 5557777777777777777777777777
Q ss_pred cCcc
Q 007741 288 ADAA 291 (591)
Q Consensus 288 ~~~~ 291 (591)
++..
T Consensus 157 ~~~~ 160 (167)
T 3v31_A 157 HLLK 160 (167)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 65
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=1.4e-26 Score=212.25 Aligned_cols=156 Identities=31% Similarity=0.476 Sum_probs=86.6
Q ss_pred CCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHH
Q 007741 127 ELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAA 206 (591)
Q Consensus 127 ~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~ 206 (591)
..+.|+|+.|++.|+.++|++|++++.+ ++..|..|.||||+|+..|+.+++++|+++++++
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---------------- 73 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMANGAD--VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV---------------- 73 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----------------
T ss_pred CcccchHHHHHHcCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----------------
Confidence 3445566666666666666666665432 3445555666666666666666666666655554
Q ss_pred HcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHH
Q 007741 207 TRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLL 286 (591)
Q Consensus 207 ~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll 286 (591)
+..|..|.||||+|+..|+.+++++|++.++++ +..|..|+||||+|+..|+.+++++|+
T Consensus 74 -------------------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 133 (169)
T 2y1l_E 74 -------------------NAVDHAGMTPLRLAALFGHLEIVEVLLKNGADV-NANDMEGHTPLHLAAMFGHLEIVEVLL 133 (169)
T ss_dssp -------------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred -------------------CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 333444555555555555555555555555554 344555555555555555555555555
Q ss_pred HcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhc
Q 007741 287 EADAAIVMLPDKFGNTALHVATRKKRTEIVTELLS 321 (591)
Q Consensus 287 ~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~ 321 (591)
++|++ ++.+|..|.||||+|+..|+.+++++|++
T Consensus 134 ~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 134 KNGAD-VNAQDKFGKTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp HTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred HcCCC-CCCcCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 55555 45555555566666655555555555554
No 66
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=7.6e-27 Score=213.32 Aligned_cols=156 Identities=21% Similarity=0.261 Sum_probs=74.5
Q ss_pred CCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCC
Q 007741 199 ATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQS 278 (591)
Q Consensus 199 ~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~ 278 (591)
.||||.|+..|+.+++++|++. +..++..|..|.||||+|+..|+.+++++|++.++++ +..|..|.||||+|+..|+
T Consensus 4 ~t~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 4 SLSVHQLAAQGEMLYLATRIEQ-ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACSKGY 81 (167)
T ss_dssp CCCHHHHHHTTCHHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTC
T ss_pred cchHHHHHHCCCHHHHHHHHHc-CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCC
Confidence 3444444444444444444444 2223334444444444444444444444444444444 3334444555555555555
Q ss_pred HHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHH
Q 007741 279 CEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLA 358 (591)
Q Consensus 279 ~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~ 358 (591)
.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..+ ..+++++|.
T Consensus 82 ~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~----~~~~~~~L~ 155 (167)
T 3v31_A 82 TDIVKMLLDCGVD-VNEYDWNGGTPLLYAVHGNHVKCVKMLLE-SGADPTIETDSGYNSMDLAVALG----YRSVQQVIE 155 (167)
T ss_dssp HHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHT----CHHHHHHHH
T ss_pred HHHHHHHHHCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcC----cHHHHHHHH
Confidence 5555555554444 44444455555555555555555555554 24555555555555555555444 444444444
Q ss_pred hcCc
Q 007741 359 RCGA 362 (591)
Q Consensus 359 ~~ga 362 (591)
++++
T Consensus 156 ~~~~ 159 (167)
T 3v31_A 156 SHLL 159 (167)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 67
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=1.6e-26 Score=211.70 Aligned_cols=159 Identities=31% Similarity=0.404 Sum_probs=141.4
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHH
Q 007741 195 GPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAV 274 (591)
Q Consensus 195 ~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 274 (591)
...+.+||+.|+..|+.+++++|+++ +.+++..|.+|.||||+|+..|+.+++++|++.++++ +..|..|+||||+|+
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 88 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMAN-GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLAA 88 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHH
Confidence 44556777888888888888877776 4456667888999999999999999999999999988 677999999999999
Q ss_pred hCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHH
Q 007741 275 KGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIK 354 (591)
Q Consensus 275 ~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~ 354 (591)
..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++ |++++.+|..|+||||+|+..+ +.+++
T Consensus 89 ~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~----~~~~~ 162 (169)
T 2y1l_E 89 LFGHLEIVEVLLKNGAD-VNANDMEGHTPLHLAAMFGHLEIVEVLLKN-GADVNAQDKFGKTAFDISIDNG----NEDLA 162 (169)
T ss_dssp HTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTT----CHHHH
T ss_pred HcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHhC----CHHHH
Confidence 99999999999999998 888999999999999999999999999995 9999999999999999999999 89999
Q ss_pred HHHHhcC
Q 007741 355 DCLARCG 361 (591)
Q Consensus 355 ~~L~~~g 361 (591)
++|.+.|
T Consensus 163 ~~L~~~G 169 (169)
T 2y1l_E 163 EILQKLN 169 (169)
T ss_dssp HHHHTC-
T ss_pred HHHHHcC
Confidence 9999876
No 68
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=7.8e-30 Score=245.99 Aligned_cols=177 Identities=18% Similarity=0.109 Sum_probs=97.9
Q ss_pred CCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHH
Q 007741 162 RSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAAR 241 (591)
Q Consensus 162 ~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~ 241 (591)
..|.||||.|+..|+.+++++|++.|+++ +..|..|.||||+|+..|+.+++++|+++ +.+++..|..|.||||+|+.
T Consensus 19 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~~n~~d~~g~tpLh~A~~ 96 (229)
T 2vge_A 19 LNPLVLLLDAALTGELEVVQQAVKEMNDP-SQPNEEGITALHNAICGANYSIVDFLITA-GANVNSPDSHGWTPLHCAAS 96 (229)
T ss_dssp SCHHHHHHHHHHHTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHH
T ss_pred cchhHHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHH
Confidence 34445555555555555555555555544 33444555555555555555555555554 33344455556666666666
Q ss_pred cCCHHHHHHHHhcCcccccccCCCCCcHHHHH--HhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHH
Q 007741 242 QGHVDVVKALLSKDPQLARRTDKKGQTALHMA--VKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTEL 319 (591)
Q Consensus 242 ~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A--~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~L 319 (591)
.|+.+++++|++.|+++....+..|+||||+| +..|+.+++++|++.|++ ++.+|..|.||+|.++..+.. ++|
T Consensus 97 ~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~-~~~~~~~~~~~l~~~~~~~~~---~~l 172 (229)
T 2vge_A 97 CNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQS-MGLMNSGAVYALWDYSAEFGD---ELS 172 (229)
T ss_dssp TTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHH-TTTSGGGEEEESSCBCCSSTT---BCC
T ss_pred cCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCC-cccccCCchHHHHHHhhcccc---ccC
Confidence 66666666666666655333234666666666 666666666666666665 555566666666644433322 344
Q ss_pred hcCCCCC--cccccCCCCCHHHHHhhCC
Q 007741 320 LSLPDTN--VNALTRDHKTALDIAEGLP 345 (591)
Q Consensus 320 l~~~g~d--~~~~d~~G~t~L~~A~~~~ 345 (591)
++ .|++ ++.+|..|+||||+|+..+
T Consensus 173 l~-~ga~~~~~~~d~~G~TpL~~A~~~g 199 (229)
T 2vge_A 173 FR-EGESVTVLRRDGPEETDWWWAALHG 199 (229)
T ss_dssp BC-TTCEEEEEESSCTTCSSEEEEEETT
T ss_pred cc-ccccccccccCCCcccHHHHHHHcC
Confidence 44 3555 5556666666666666665
No 69
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=4e-27 Score=214.76 Aligned_cols=158 Identities=30% Similarity=0.345 Sum_probs=92.8
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhC
Q 007741 197 SNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKG 276 (591)
Q Consensus 197 ~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 276 (591)
.|.||||.|+..|+.++++.|++..+......+..|.||||+|+..|+.+++++|++.++++ +..|..|+||||+|+..
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 85 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNACSY 85 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHHHHHc
Confidence 34445555555555555555554434444444555556666666666666666666666555 44466666666666666
Q ss_pred CCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHH
Q 007741 277 QSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDC 356 (591)
Q Consensus 277 ~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~ 356 (591)
|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|.. + +.+++++
T Consensus 86 ~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~a~~-~----~~~i~~~ 158 (165)
T 3twr_A 86 GHYEVAELLVKHGAV-VNVADLWKFTPLHEAAAKGKYEICKLLLQH-GADPTKKNRDGNTPLDLVKD-G----DTDIQDL 158 (165)
T ss_dssp TCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCTGGGSCT-T----CHHHHHH
T ss_pred CcHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCChhHhHhc-C----ChHHHHH
Confidence 666666666666665 555666666666666666666666666663 66666666666666666554 3 4566666
Q ss_pred HHhcCc
Q 007741 357 LARCGA 362 (591)
Q Consensus 357 L~~~ga 362 (591)
|.+.|+
T Consensus 159 L~~~gA 164 (165)
T 3twr_A 159 LRGDAA 164 (165)
T ss_dssp HHTC--
T ss_pred Hhhccc
Confidence 666554
No 70
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=2.1e-26 Score=207.29 Aligned_cols=149 Identities=29% Similarity=0.386 Sum_probs=77.4
Q ss_pred hHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCH
Q 007741 166 DPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHV 245 (591)
Q Consensus 166 t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~ 245 (591)
|+||.|+..|+.+++++|++.+++.. .+..|.||||+|+..|+.+++++|+++ +.+++..+..|.||||+|+..|+.
T Consensus 4 ~~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 4 KKLLEAARAGQDDEVRILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLLRA-GVSRDARTKVDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTCCCC--CCTTCCCHHHHHHHHTCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcChH
Confidence 34444444444444444444443321 233344444444444444444444433 222333445555555555555555
Q ss_pred HHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHH
Q 007741 246 DVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTEL 319 (591)
Q Consensus 246 ~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~L 319 (591)
+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|
T Consensus 81 ~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 81 NIVEVLLKHGADV-NAKDMLKMTALHWATEHNHQEVVELLIKYGAD-VHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 5555555555555 44455666666666666666666666666655 555566666666666666666666554
No 71
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=9.7e-27 Score=215.30 Aligned_cols=163 Identities=23% Similarity=0.341 Sum_probs=71.0
Q ss_pred hHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCH
Q 007741 166 DPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHV 245 (591)
Q Consensus 166 t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~ 245 (591)
++||.|+..|+.+++++|++.++...+..+..|.||||+|+..|+.+++++|+++ +.+++..|..|.||||+|+..|+.
T Consensus 7 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~ 85 (179)
T 3f6q_A 7 DDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR-GARINVMNRGDDTPLHLAASHGHR 85 (179)
T ss_dssp CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCH
Confidence 3333333333333333333332222233333333333333333333333333333 222333344444444444444444
Q ss_pred HHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCC
Q 007741 246 DVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDT 325 (591)
Q Consensus 246 ~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~ 325 (591)
+++++|++.|+++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|++ .|+
T Consensus 86 ~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~~~~L~~-~g~ 162 (179)
T 3f6q_A 86 DIVQKLLQYKADI-NAVNEHGNVPLHYACFWGQDQVAEDLVANGAL-VSICNKYGEMPVDKAKAPLRELLRERAEK-MGQ 162 (179)
T ss_dssp HHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-SSBCCTTSCCGGGGSCHHHHHHHHHHHHH-TTC
T ss_pred HHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cchhccCCCCcHHHHHHHHHHHHHHHHHH-hhc
Confidence 4444444444444 33344455555555555555555555555444 44445555555555555555555555554 244
Q ss_pred CcccccC
Q 007741 326 NVNALTR 332 (591)
Q Consensus 326 d~~~~d~ 332 (591)
+++..+.
T Consensus 163 ~~~~~~~ 169 (179)
T 3f6q_A 163 NLNRIPY 169 (179)
T ss_dssp CCSCBCC
T ss_pred CcccCCc
Confidence 4444433
No 72
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=1e-28 Score=238.22 Aligned_cols=192 Identities=20% Similarity=0.196 Sum_probs=167.0
Q ss_pred ccccCCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCH
Q 007741 122 VNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATP 201 (591)
Q Consensus 122 ~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tp 201 (591)
.+..+..|.||||.|+..|+.++|++|++.+.+ ++..|..|+||||+|+..|+.+++++|+++|+++ +..|..|.||
T Consensus 14 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~tp 90 (229)
T 2vge_A 14 ARRARLNPLVLLLDAALTGELEVVQQAVKEMND--PSQPNEEGITALHNAICGANYSIVDFLITAGANV-NSPDSHGWTP 90 (229)
T ss_dssp CCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCH
T ss_pred ccccccchhHHHHHHHHcCCHHHHHHHHhcCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCH
Confidence 445566778899999999999999999998764 5778999999999999999999999999999998 6778899999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCcceecC-CCCCcHHHHH--HHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCC
Q 007741 202 LVSAATRGHTAVVNELLSKDGGLLEISR-SNGKNALHFA--ARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQS 278 (591)
Q Consensus 202 L~~A~~~g~~~~v~~LL~~~~~~~~~~~-~~g~tpLh~A--~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~ 278 (591)
||+|+..|+.+++++|++++ .+++..+ .+|.||||+| +..|+.+++++|++.|+++ +..|..|.|++|.++..+.
T Consensus 91 Lh~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~-~~~~~~~~~~l~~~~~~~~ 168 (229)
T 2vge_A 91 LHCAASCNDTVICMALVQHG-AAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSM-GLMNSGAVYALWDYSAEFG 168 (229)
T ss_dssp HHHHHHTTCHHHHHHHHTTT-CCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHT-TTSGGGEEEESSCBCCSST
T ss_pred HHHHHHcCCHHHHHHHHHcC-CCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCc-ccccCCchHHHHHHhhccc
Confidence 99999999999999999984 4455554 6999999999 9999999999999999998 6678899999997665543
Q ss_pred HHHHHHHHHcCccc-ccCCCCCCCcHHHHHHHcCcHHHHHHHhc
Q 007741 279 CEVVKLLLEADAAI-VMLPDKFGNTALHVATRKKRTEIVTELLS 321 (591)
Q Consensus 279 ~~~v~~Ll~~~~~~-~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~ 321 (591)
. ++|++.|+++ ++.+|.+|+||||+|+..|+.++|+.++-
T Consensus 169 ~---~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~l 209 (229)
T 2vge_A 169 D---ELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNYF 209 (229)
T ss_dssp T---BCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGGE
T ss_pred c---ccCccccccccccccCCCcccHHHHHHHcCCcceeehhhh
Confidence 3 5778888764 67789999999999999999999876543
No 73
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=1.5e-26 Score=213.97 Aligned_cols=165 Identities=19% Similarity=0.294 Sum_probs=152.9
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHh
Q 007741 196 PSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVK 275 (591)
Q Consensus 196 ~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~ 275 (591)
..+.++|+.|+..|+.+++++|++..+.+++..+..|.||||+|+..|+.+++++|++.++++ +..|..|+||||+|+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 81 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAAS 81 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHH
Confidence 356799999999999999999999988888899999999999999999999999999999998 6779999999999999
Q ss_pred CCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHH
Q 007741 276 GQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKD 355 (591)
Q Consensus 276 ~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~ 355 (591)
.|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|++. |++++.+|..|+|||++|...+ ..++++
T Consensus 82 ~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~----~~~~~~ 155 (179)
T 3f6q_A 82 HGHRDIVQKLLQYKAD-INAVNEHGNVPLHYACFWGQDQVAEDLVAN-GALVSICNKYGEMPVDKAKAPL----RELLRE 155 (179)
T ss_dssp TTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSSBCCTTSCCGGGGSCHHH----HHHHHH
T ss_pred cCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcchhccCCCCcHHHHHHHH----HHHHHH
Confidence 9999999999999998 889999999999999999999999999994 9999999999999999998877 889999
Q ss_pred HHHhcCcccccc
Q 007741 356 CLARCGAVRANE 367 (591)
Q Consensus 356 ~L~~~ga~~~~~ 367 (591)
+|.+.|+.....
T Consensus 156 ~L~~~g~~~~~~ 167 (179)
T 3f6q_A 156 RAEKMGQNLNRI 167 (179)
T ss_dssp HHHHTTCCCSCB
T ss_pred HHHHhhcCcccC
Confidence 999999986543
No 74
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=4.1e-26 Score=205.37 Aligned_cols=151 Identities=27% Similarity=0.377 Sum_probs=140.0
Q ss_pred CCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHc
Q 007741 129 GETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATR 208 (591)
Q Consensus 129 g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~ 208 (591)
..||||.|+..|+.+++++|++.+.+.+ .+..|.||||+|+..|+.+++++|+++++++ +..+..|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 77 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT---TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASE 77 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC---CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC---cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHc
Confidence 4689999999999999999999886532 5788999999999999999999999999987 66788999999999999
Q ss_pred CCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHH
Q 007741 209 GHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLL 285 (591)
Q Consensus 209 g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~L 285 (591)
|+.+++++|+++ +.+++..|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|
T Consensus 78 ~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 78 GHANIVEVLLKH-GADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADV-HTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TCHHHHHHHHTT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ChHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 999999999988 5667888999999999999999999999999999998 67799999999999999999999987
No 75
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=1.4e-26 Score=211.05 Aligned_cols=159 Identities=24% Similarity=0.367 Sum_probs=79.2
Q ss_pred CCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHH
Q 007741 126 NELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSA 205 (591)
Q Consensus 126 n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A 205 (591)
|.+|.||||.|+..|+.+++++|++.+ ..+....+..|.||||+|+..|+.+++++|+++++++ +..|..|.||||+|
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 82 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQ-SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNA 82 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTT-TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcC-CCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHHH
Confidence 445566666666666666666666542 2334445555556666666666666666666665554 33444455555555
Q ss_pred HHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHH
Q 007741 206 ATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLL 285 (591)
Q Consensus 206 ~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~L 285 (591)
+..|+.+++++|+++ +.+++..|..|.||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+. ++.+++++|
T Consensus 83 ~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~a~~-~~~~i~~~L 159 (165)
T 3twr_A 83 CSYGHYEVAELLVKH-GAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADP-TKKNRDGNTPLDLVKD-GDTDIQDLL 159 (165)
T ss_dssp HHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCTGGGSCT-TCHHHHHHH
T ss_pred HHcCcHHHHHHHHhC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCChhHhHhc-CChHHHHHH
Confidence 555555555555544 2333344444444444444444444444444444443 3334444444444333 444444444
Q ss_pred HHcC
Q 007741 286 LEAD 289 (591)
Q Consensus 286 l~~~ 289 (591)
+++|
T Consensus 160 ~~~g 163 (165)
T 3twr_A 160 RGDA 163 (165)
T ss_dssp HTC-
T ss_pred hhcc
Confidence 4433
No 76
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=4.7e-26 Score=205.48 Aligned_cols=153 Identities=27% Similarity=0.396 Sum_probs=82.2
Q ss_pred CCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHc
Q 007741 129 GETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATR 208 (591)
Q Consensus 129 g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~ 208 (591)
+.||||.|+..|+.+++++|++. ...+.+..+..|.||||+ +..|+.+++++|+++|+++ +..|..|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 78 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAART 78 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHc
Confidence 34666666666666666666665 333455566666666666 6666666666666666655 34444555555555555
Q ss_pred CCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHH
Q 007741 209 GHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLE 287 (591)
Q Consensus 209 g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~ 287 (591)
|+.+++++|+++ +.+++..|.+|.||||+|+..|+.+++++|++. +++ +..|..|.||||+|+..|+.+++++|++
T Consensus 79 ~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~-~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 79 GFLDTLKVLVEH-GADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDL-HRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp TCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCT-TCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred CcHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 555555555544 233444444445555555555555555544444 333 3334444444444444444444444443
No 77
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=6.3e-26 Score=204.64 Aligned_cols=154 Identities=27% Similarity=0.334 Sum_probs=117.6
Q ss_pred CChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcC
Q 007741 164 GFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQG 243 (591)
Q Consensus 164 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g 243 (591)
|.||||.|+..|+.++++.|++..+...+..+..|.||||+ +..|+.+++++|+++ +.+++..|..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQ-GASPNVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcC
Confidence 45788888888888888888877332335667778888888 777888888888877 4556677777888888888888
Q ss_pred CHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcC
Q 007741 244 HVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSL 322 (591)
Q Consensus 244 ~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~ 322 (591)
+.+++++|++.|+++ +..|..|+||||+|+..|+.+++++|++. ++ ++.+|..|.||||+|+..|+.+++++|+++
T Consensus 80 ~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~-~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 80 FLDTLKVLVEHGADV-NVPDGTGALPIHLAVQEGHTAVVSFLAAE-SD-LHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC-TTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred cHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHhChHHHHHHHHhc-cC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 888888888887776 55677788888888888888888888877 54 677777888888888888888888887763
No 78
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.94 E-value=7.8e-29 Score=255.59 Aligned_cols=222 Identities=19% Similarity=0.157 Sum_probs=167.2
Q ss_pred CCCCCcHHHHHHHhCcHHHHHHHHhcCCCcc-CccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCc--ccCCCCCCCHH
Q 007741 126 NELGETALFTAADKGHIEVVNELLKYSTKEG-LTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLS--QTTGPSNATPL 202 (591)
Q Consensus 126 n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~-~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~--~~~~~~g~tpL 202 (591)
+.++.||||+||+.|+.++|++|++.++... ....+..|.||||+|+..|+.++|++|+++|++.. ...+.+ .|||
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpL 167 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAF 167 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHH
Confidence 3445699999999999999999999876321 12345568899999999999999999999997531 112222 8999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCccee--cCCCCCcHHHHHH-HcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCH
Q 007741 203 VSAATRGHTAVVNELLSKDGGLLEI--SRSNGKNALHFAA-RQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSC 279 (591)
Q Consensus 203 ~~A~~~g~~~~v~~LL~~~~~~~~~--~~~~g~tpLh~A~-~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~ 279 (591)
|+|+..|+.+++++|++++ .+++. .|..|.||||+|+ ..|+.+++++|++.|++ |.||||+|+.+|+.
T Consensus 168 h~Aa~~G~~eiv~~Ll~~g-a~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~--------~~taL~~Aa~~g~~ 238 (376)
T 2aja_A 168 RLAAENGHLHVLNRLCELA-PTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM--------LAYAEIHEFEYGEK 238 (376)
T ss_dssp HHHHHTTCHHHHHHHHHSC-GGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH--------HHHHHHCTTTTTTT
T ss_pred HHHHHCCCHHHHHHHHHcC-CccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc--------cchHHHHHHHCCCH
Confidence 9999999999999999984 44444 6788999999999 99999999999996632 78999999999999
Q ss_pred HHHHHHHHcCcccccCCCCCCCcHHHHHHHc---------------------------CcHHHHHHHhcCCCCC----cc
Q 007741 280 EVVKLLLEADAAIVMLPDKFGNTALHVATRK---------------------------KRTEIVTELLSLPDTN----VN 328 (591)
Q Consensus 280 ~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~---------------------------g~~~iv~~Ll~~~g~d----~~ 328 (591)
+++++|+++|++ ++..| ++++.|+.. +..+.+++|++..+++ ..
T Consensus 239 evv~lL~~~ga~-~~~~~----~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g 313 (376)
T 2aja_A 239 YVNPFIARHVNR-LKEMH----DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTA 313 (376)
T ss_dssp THHHHHHHHHHH-HHHHH----TTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCC
T ss_pred HHHHHHHhcCcc-ccccc----HHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccC
Confidence 999999998876 22222 122333322 3345667776643221 12
Q ss_pred cccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCccccc
Q 007741 329 ALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVRAN 366 (591)
Q Consensus 329 ~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 366 (591)
...+.+.|||++|+..| +.+++++|++.|..+..
T Consensus 314 ~~~n~~~~~L~~A~~~g----~~e~v~lLl~~~~v~~~ 347 (376)
T 2aja_A 314 TIPGDANELLRLALRLG----NQGACALLLSIPSVLAL 347 (376)
T ss_dssp SSTTCCCHHHHHHHHHT----CTTHHHHHTTSHHHHHS
T ss_pred CCCCCccHHHHHHHHcC----cHHHHHHHHcChHHHHH
Confidence 23346778999999999 88899999988765443
No 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=1.1e-26 Score=225.68 Aligned_cols=209 Identities=16% Similarity=0.142 Sum_probs=137.8
Q ss_pred CCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHH
Q 007741 126 NELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSA 205 (591)
Q Consensus 126 n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A 205 (591)
+..|.||||.|++.|+.+.++.|+++|.+.+. +..|.||||.|+..|+.+++++|++.++++ +..|..|.||||+|
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~---~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A 77 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKF---NPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNA 77 (239)
T ss_dssp --------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCccc---CchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHH
Confidence 34689999999999999999999998876543 356899999999999999999999999987 66788999999999
Q ss_pred HHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCC-cHHHHH--HhCCCHHHH
Q 007741 206 ATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQ-TALHMA--VKGQSCEVV 282 (591)
Q Consensus 206 ~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~-t~Lh~A--~~~~~~~~v 282 (591)
+..|+.+++++|+++ +.+++..|.+|.||||+|+..|+.+++++|+++|+++ +..|..|. ||||+| +..|+.+++
T Consensus 78 ~~~g~~~~v~~Ll~~-ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~~~t~l~~a~~~~~g~~~~~ 155 (239)
T 1ycs_B 78 VCAGHTEIVKFLVQF-GVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV-FAMTYSDMQTAADKCEEMEEGYTQCS 155 (239)
T ss_dssp HHHTCHHHHHHHHHH-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHCCSSSTTCCCHH
T ss_pred HHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ceecCCCCcchHHHHHHhhhccHHHH
Confidence 999999999999988 5667888999999999999999999999999999998 45565555 999999 788999999
Q ss_pred HHHHHcCcccccCC---------CCCCCcHHHHHHHcCcHHHHHHHhcCCCCC------cccccCCCCCHHHHHhhC
Q 007741 283 KLLLEADAAIVMLP---------DKFGNTALHVATRKKRTEIVTELLSLPDTN------VNALTRDHKTALDIAEGL 344 (591)
Q Consensus 283 ~~Ll~~~~~~~~~~---------d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d------~~~~d~~G~t~L~~A~~~ 344 (591)
++|++++++ .+.. |..+.++++++...|. +++.|.+ .+.+ ....++.|.+|.++....
T Consensus 156 ~~Ll~~~a~-~~~~~~~~~~al~d~~~~~~~eLa~~~G~--~i~vl~~-~~~~~~~Ww~~~~~~~~G~~P~~yv~~~ 228 (239)
T 1ycs_B 156 QFLYGVQEK-MGIMNKGVIYALWDYEPQNDDELPMKEGD--CMTIIHR-EDEDEIEWWWARLNDKEGYVPRNLLGLY 228 (239)
T ss_dssp HHHHHHHHH-TTTTGGGEEEESSCBCCSSTTBCCBCSSC--EEEECCC-CTTSCSSEEEEEETTEEEEEEGGGEECC
T ss_pred HHHHHhhhc-ccccccceEEEEeccCCCCCCcccccCCC--EEEEEEe-cCCCCCCEEEEEECCcEEEeehHHeeEC
Confidence 999998876 3333 5667788888777765 3333333 2222 234455566666655443
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=1.3e-26 Score=225.05 Aligned_cols=178 Identities=19% Similarity=0.204 Sum_probs=128.8
Q ss_pred CCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHH
Q 007741 162 RSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAAR 241 (591)
Q Consensus 162 ~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~ 241 (591)
..|.||||.|+..|+.++++.|+++|.++.. +..|.||||.|+..|+.+++++|++.+ .+++..|..|.||||+|+.
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~--~~~~~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~ 79 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKF--NPLPLALLLDSSLEGEFDLVQRIIYEV-DDPSLPNDEGITALHNAVC 79 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTT-SSCCCCCTTSCCHHHHHHH
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCccc--CchhhHHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHH
Confidence 4589999999999999999999999998843 467899999999999999999999884 4788889999999999999
Q ss_pred cCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCC-cHHHHH--HHcCcHHHHHH
Q 007741 242 QGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGN-TALHVA--TRKKRTEIVTE 318 (591)
Q Consensus 242 ~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~-T~Lh~A--~~~g~~~iv~~ 318 (591)
.|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|. ||||+| +..|+.+++++
T Consensus 80 ~g~~~~v~~Ll~~ga~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~~~t~l~~a~~~~~g~~~~~~~ 157 (239)
T 1ycs_B 80 AGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCNNVQVCKFLVESGAA-VFAMTYSDMQTAADKCEEMEEGYTQCSQF 157 (239)
T ss_dssp HTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCSSSCCCHHHHCCSSSTTCCCHHHH
T ss_pred cCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-cceecCCCCcchHHHHHHhhhccHHHHHH
Confidence 99999999999999998 77799999999999999999999999999998 677777776 999999 78899999999
Q ss_pred HhcCCCCCcccc---------cCCCCCHHHHHhhCC
Q 007741 319 LLSLPDTNVNAL---------TRDHKTALDIAEGLP 345 (591)
Q Consensus 319 Ll~~~g~d~~~~---------d~~G~t~L~~A~~~~ 345 (591)
|++. |++++.. +..|.++++++.+.+
T Consensus 158 Ll~~-~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G 192 (239)
T 1ycs_B 158 LYGV-QEKMGIMNKGVIYALWDYEPQNDDELPMKEG 192 (239)
T ss_dssp HHHH-HHHTTTTGGGEEEESSCBCCSSTTBCCBCSS
T ss_pred HHHh-hhcccccccceEEEEeccCCCCCCcccccCC
Confidence 9984 7777665 566788888777655
No 81
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.90 E-value=4.8e-24 Score=192.51 Aligned_cols=144 Identities=19% Similarity=0.229 Sum_probs=100.9
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCc-HHHH
Q 007741 194 TGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQT-ALHM 272 (591)
Q Consensus 194 ~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t-~Lh~ 272 (591)
.+..|.||||+|+..|+.+++++|+++ +..++..|..|.||||+|+ .|+.+++++|++.|+++ +..|..|+| |||+
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEA-GANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHD 84 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTT-TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHH
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHH
Confidence 345566777777777777777777766 4455666778888888875 78888888888888877 666888888 9999
Q ss_pred HHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHh
Q 007741 273 AVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAE 342 (591)
Q Consensus 273 A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~ 342 (591)
|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||.+-+.
T Consensus 85 A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~~~~~~ 152 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRA-AAGGTRGSNHARIDAAEGPS 152 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSS-CC------------------
T ss_pred HHHCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHhCHHHHHHHHHH-cCCCCCccCcCcCcccccCC
Confidence 9999999999999998887 78888999999999999999999999998 48999999999999877543
No 82
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=2.7e-24 Score=199.90 Aligned_cols=156 Identities=17% Similarity=0.096 Sum_probs=120.3
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhcCCCcceecC-CCCCcHHHHHHHcCCH----HHHHHHHhcCcccccccCCCCCcHHHH
Q 007741 198 NATPLVSAATRGHTAVVNELLSKDGGLLEISR-SNGKNALHFAARQGHV----DVVKALLSKDPQLARRTDKKGQTALHM 272 (591)
Q Consensus 198 g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~-~~g~tpLh~A~~~g~~----~~v~~Ll~~~~~~~~~~d~~g~t~Lh~ 272 (591)
+.++|+.|+..|+.+.++.++..+. +..+ ..|+||||+|+..|+. +++++|+++|+++ +.+|..|+||||+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~---~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~ 81 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY---EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFP 81 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS---SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc---ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHH
Confidence 3467777888888777777776542 2233 5688888888887764 4788888888887 6667888888888
Q ss_pred HHhCCC------HHHHHHHHHcCcccccCCCCCCC-cHHHHHHHcC-----cHHHHHHHhcCCCCCcccccCCCCCHHHH
Q 007741 273 AVKGQS------CEVVKLLLEADAAIVMLPDKFGN-TALHVATRKK-----RTEIVTELLSLPDTNVNALTRDHKTALDI 340 (591)
Q Consensus 273 A~~~~~------~~~v~~Ll~~~~~~~~~~d~~g~-T~Lh~A~~~g-----~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~ 340 (591)
|+..++ .+++++|+++|++ ++.+|..|+ ||||+|+..+ +.+++++|++..|+|++.+|..|+||||+
T Consensus 82 a~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~ 160 (186)
T 3t8k_A 82 LFQGGGNDITGTTELCKIFLEKGAD-ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEF 160 (186)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCC-SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHH
T ss_pred HHHcCCcchhhHHHHHHHHHHCCCC-CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHH
Confidence 887776 5778888888888 788888888 8898888843 45688888885588999999999999999
Q ss_pred HhhCCCChhhHHHHHHHHhcCc
Q 007741 341 AEGLPSSEEASEIKDCLARCGA 362 (591)
Q Consensus 341 A~~~~~~~~~~~i~~~L~~~ga 362 (591)
|.+.+ ..+++++|.++..
T Consensus 161 A~~~~----~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 161 VKRCQ----KPIALKMMEDYIK 178 (186)
T ss_dssp HHTTT----CHHHHHHHHHHHH
T ss_pred HHHcC----CHHHHHHHHHHHH
Confidence 98888 7777777776544
No 83
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.90 E-value=1e-23 Score=185.71 Aligned_cols=131 Identities=19% Similarity=0.225 Sum_probs=77.5
Q ss_pred cceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCC-CCc
Q 007741 224 LLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKF-GNT 302 (591)
Q Consensus 224 ~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~-g~T 302 (591)
.++..+..|.||||+|+..|+.+++++|++.++++ +..|..|+||||+|+. ++.+++++|+++|++ ++.+|.. |+|
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~~g~t 80 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLLHGAE-PNCADPATLTR 80 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-SSCCBTTTTBC
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-CCCcCCCCCCC
Confidence 34445555666666666666666666666665555 4445556666666666 666666666666555 5555555 566
Q ss_pred HHHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCc
Q 007741 303 ALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGA 362 (591)
Q Consensus 303 ~Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga 362 (591)
|||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..+ ..+++++|+++|+
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~----~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHR-AGARLDVCDAWGRLPVDLAEEQG----HRDIARYLHAATG 135 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHH-TCCCCCCCSSSSSCHHHHHHHHT----CHHHHHHHHHHHC
T ss_pred HHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcC----CHHHHHHHHHcCC
Confidence 6666666666666666665 35666666666666666666555 5556666655554
No 84
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.89 E-value=1.3e-23 Score=189.69 Aligned_cols=143 Identities=24% Similarity=0.331 Sum_probs=64.4
Q ss_pred cccCCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCC-H
Q 007741 123 NEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNAT-P 201 (591)
Q Consensus 123 ~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t-p 201 (591)
+..+..|.||||+|+..|+.++|++|++++.+ ++..+..|+||||+|+ .|+.+++++|+++|+++ +..|..|.| |
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttp 81 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGAN--PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRP 81 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCC--TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHH
Confidence 34455555666666666666666666654432 3444555555555553 55555555555555554 334444444 5
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHH
Q 007741 202 LVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALH 271 (591)
Q Consensus 202 L~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh 271 (591)
||+|+..|+.+++++|+++ +.+++..|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||.+
T Consensus 82 L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~~~ 149 (156)
T 1bi7_B 82 VHDAAREGFLDTLVVLHRA-GARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGT-RGSNHARIDAAE 149 (156)
T ss_dssp HHHHHHHTCHHHHHHHHHH-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------------
T ss_pred HHHHHHCCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCC-CccCcCcCcccc
Confidence 5555555555555555544 3334444444455555555545555555555444444 333444444433
No 85
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.89 E-value=2.6e-23 Score=183.04 Aligned_cols=128 Identities=25% Similarity=0.416 Sum_probs=54.8
Q ss_pred ccccCCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCC-CCC
Q 007741 122 VNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPS-NAT 200 (591)
Q Consensus 122 ~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~-g~t 200 (591)
++..|..|.||||+|+..|+.+++++|++++.+ ++..|..|+||||+|+. |+.+++++|+++++++ +..|.. |.|
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~~g~t 80 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAGAD--PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPATLTR 80 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTTTTBC
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC--cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCCCCCC
Confidence 444444444444444444444444444444322 23344444444444444 4444444444444443 222333 344
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhc
Q 007741 201 PLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSK 254 (591)
Q Consensus 201 pL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ 254 (591)
|||+|+..|+.+++++|+++ +.+++..|..|.||||+|+..|+.+++++|+++
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ 133 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHRA-GARLDVCDAWGRLPVDLAEEQGHRDIARYLHAA 133 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHT-CCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 44444444444444444433 222333333444444444444444444444433
No 86
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.89 E-value=1e-23 Score=196.04 Aligned_cols=154 Identities=19% Similarity=0.113 Sum_probs=103.5
Q ss_pred CCcHHHHHHHhCcHHHHHHHHhcCCCccCccCC-CCCChHHHHHHHhCcH----HHHHHHHhCCCCCcccCCCCCCCHHH
Q 007741 129 GETALFTAADKGHIEVVNELLKYSTKEGLTRKN-RSGFDPLHIAAVQGHH----AIVQVLLDHDPSLSQTTGPSNATPLV 203 (591)
Q Consensus 129 g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~-~~g~t~Lh~A~~~g~~----~iv~~Ll~~~~~~~~~~~~~g~tpL~ 203 (591)
+.++|+.|++.|+.+.++.+++.+. +..+ ..|+||||+|+.+|+. +++++|+++|+++ +..|..|+||||
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~----~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh 80 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY----EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFF 80 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS----SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc----ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHH
Confidence 4578888888888888888887542 2233 5688888888888864 4888888888887 566778888888
Q ss_pred HHHHcCC------HHHHHHHHhcCCCcceecCCCCC-cHHHHHHHcC-----CHHHHHHHHh-cCcccccccCCCCCcHH
Q 007741 204 SAATRGH------TAVVNELLSKDGGLLEISRSNGK-NALHFAARQG-----HVDVVKALLS-KDPQLARRTDKKGQTAL 270 (591)
Q Consensus 204 ~A~~~g~------~~~v~~LL~~~~~~~~~~~~~g~-tpLh~A~~~g-----~~~~v~~Ll~-~~~~~~~~~d~~g~t~L 270 (591)
+|+..|+ .+++++|+++ +.+++..|..|. ||||+|+..+ +.+++++|++ .|+++ +.+|..|+|||
T Consensus 81 ~a~~~~~~~~~~~~~iv~~Ll~~-Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~-~~~d~~G~TpL 158 (186)
T 3t8k_A 81 PLFQGGGNDITGTTELCKIFLEK-GADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQL-LIKDKWGLTAL 158 (186)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHT-TCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCT-TCCCTTSCCHH
T ss_pred HHHHcCCcchhhHHHHHHHHHHC-CCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCC-cccCCCCCCHH
Confidence 8887776 4556666665 445566666666 6666666633 2345556665 55555 44555566666
Q ss_pred HHHHhCCCHHHHHHHHHcC
Q 007741 271 HMAVKGQSCEVVKLLLEAD 289 (591)
Q Consensus 271 h~A~~~~~~~~v~~Ll~~~ 289 (591)
|+|++.|+.+++++|.+..
T Consensus 159 ~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 159 EFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp HHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHH
Confidence 6666666666665555543
No 87
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.87 E-value=2.9e-22 Score=176.25 Aligned_cols=123 Identities=32% Similarity=0.368 Sum_probs=66.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHc
Q 007741 231 NGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRK 310 (591)
Q Consensus 231 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~ 310 (591)
.+.||||+|+..|+.+++++|++.++++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD-VNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHH
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHc
Confidence 3455555555555555555555555554 34455555555555555555555555555554 445555555555555555
Q ss_pred CcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhc
Q 007741 311 KRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARC 360 (591)
Q Consensus 311 g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ 360 (591)
|+.+++++|++. |++++.+|..|+||||+|+..+ ..+++++|++.
T Consensus 91 ~~~~~v~~Ll~~-g~~~~~~~~~g~tpl~~A~~~~----~~~~~~~Ll~~ 135 (136)
T 2jab_A 91 GHLEIAEVLLKH-GADVNAQDKFGKTAFDISIGNG----NEDLAEILQKL 135 (136)
T ss_dssp TCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTT----CHHHHHHHHHC
T ss_pred CCHHHHHHHHHc-CCCCcCcCCCCCCHHHHHHHCC----CHHHHHHHHHc
Confidence 555555555552 5555555555555555555555 45555555544
No 88
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.87 E-value=7.1e-22 Score=170.62 Aligned_cols=121 Identities=46% Similarity=0.643 Sum_probs=60.6
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCC
Q 007741 198 NATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQ 277 (591)
Q Consensus 198 g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~ 277 (591)
|.||||+|+..|+.+++++|+++ +..++..+..|.||||+|+..|+.+++++|++.++++ +..|..|.||||+|+..+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTT
T ss_pred CccHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHHHcC
Confidence 44555555555555555555544 2233444445555555555555555555555554444 333445555555555555
Q ss_pred CHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhc
Q 007741 278 SCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLS 321 (591)
Q Consensus 278 ~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~ 321 (591)
+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|++
T Consensus 80 ~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 122 (126)
T 1n0r_A 80 HLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLE 122 (126)
T ss_dssp CHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 55555555555444 44444555555555555555555555544
No 89
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.87 E-value=1.3e-21 Score=168.91 Aligned_cols=125 Identities=40% Similarity=0.623 Sum_probs=75.9
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHH
Q 007741 128 LGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAAT 207 (591)
Q Consensus 128 ~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 207 (591)
+|.||||.|+..|+.+++++|++++.+ ++..+..|.||||+|+..|+.+++++|+++++++ +..+..|.||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~--~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~ 77 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD--VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAAR 77 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC--CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHHH
Confidence 366777777777777777777776533 4455666677777777777777777777766665 3445555566666665
Q ss_pred cCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCc
Q 007741 208 RGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDP 256 (591)
Q Consensus 208 ~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~ 256 (591)
.|+.+++++|+++ +..++..|..|.||||+|+..|+.+++++|+++|+
T Consensus 78 ~~~~~~~~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 78 NGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp TTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred cChHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 5555555555555 33344445555555555555555555555555544
No 90
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.87 E-value=1.2e-21 Score=172.32 Aligned_cols=125 Identities=27% Similarity=0.378 Sum_probs=70.7
Q ss_pred CCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHH
Q 007741 126 NELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSA 205 (591)
Q Consensus 126 n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A 205 (591)
...|.||||+|+..|+.+++++|++++.+ ++..|..|.||||+|+..|+.+++++|+++++++ +..|..|.||||+|
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A 87 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGAD--VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPLHLA 87 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCC--CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHH
Confidence 34456666666666666666666665433 3455556666666666666666666666666554 33444555555555
Q ss_pred HHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhc
Q 007741 206 ATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSK 254 (591)
Q Consensus 206 ~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ 254 (591)
+..|+.+++++|+++ +.+++..|.+|.||||+|+..|+.+++++|++.
T Consensus 88 ~~~~~~~~v~~Ll~~-g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 88 AFIGHLEIAEVLLKH-GADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp HHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred HHcCCHHHHHHHHHc-CCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 555555555555554 333444455555555555555555555555544
No 91
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.86 E-value=2.5e-22 Score=176.83 Aligned_cols=127 Identities=25% Similarity=0.295 Sum_probs=101.9
Q ss_pred ecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHH
Q 007741 227 ISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHV 306 (591)
Q Consensus 227 ~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~ 306 (591)
..|.+|.||||+|+..|+.+++++|++.++++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~ 82 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQHKAL-VNTTGYQNDSPLHD 82 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCGGGCCHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-ccCcCCCCCCHHHH
Confidence 46778888888888888888888888888877 56688888888888888888888888888877 77788888888888
Q ss_pred HHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhc
Q 007741 307 ATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARC 360 (591)
Q Consensus 307 A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ 360 (591)
|+..|+.+++++|++. |++++.+|..|+||||+|...+ ..+++++|.+.
T Consensus 83 A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~----~~~~l~~l~~~ 131 (137)
T 3c5r_A 83 AAKNGHVDIVKLLLSY-GASRNAVNIFGLRPVDYTDDES----MKSLLLLPEKN 131 (137)
T ss_dssp HHHTTCHHHHHHHHHT-TCCTTCCCTTSCCGGGGCCCHH----HHHHHSCC---
T ss_pred HHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHhhcc----HHHHHhhcccc
Confidence 8888888888888884 8888888888888888887555 55555554443
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.85 E-value=8.6e-22 Score=182.70 Aligned_cols=143 Identities=22% Similarity=0.233 Sum_probs=112.3
Q ss_pred ccCCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHH
Q 007741 124 EVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLV 203 (591)
Q Consensus 124 ~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~ 203 (591)
..+..|.||||+|+..|+.+++++|++ +. +++..|..|+||||+|+..|+.+++++|+++|++++...+..|.||||
T Consensus 39 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~--~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~ 115 (183)
T 3deo_A 39 DVVSEYETPWWTAARKADEQALSQLLE-DR--DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALH 115 (183)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHTT-TS--CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHH
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHh-cC--CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHH
Confidence 345678999999999999999999998 54 467788899999999999999999999999999885444477888888
Q ss_pred HHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHH
Q 007741 204 SAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVK 283 (591)
Q Consensus 204 ~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~ 283 (591)
+|+..|+.+++++|+++ +.+++..|.+|.||||+|+..++ ...+.++|++|+..|..++++
T Consensus 116 ~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~------------------~~~~~~~l~~a~~~~~~~i~~ 176 (183)
T 3deo_A 116 MAAGYVRPEVVEALVEL-GADIEVEDERGLTALELAREILK------------------TTPKGNPMQFGRRIGLEKVIN 176 (183)
T ss_dssp HHHHTTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHHH------------------TCCCCSHHHHHHHHHHHHHHH
T ss_pred HHHhcCcHHHHHHHHHc-CCCCcCCCCCCCCHHHHHHHhcc------------------CcccccHHHHHHHcCHHHHHH
Confidence 88888888888888877 45567778888888888876432 134566777777777777777
Q ss_pred HHHHc
Q 007741 284 LLLEA 288 (591)
Q Consensus 284 ~Ll~~ 288 (591)
+|.++
T Consensus 177 ~L~~~ 181 (183)
T 3deo_A 177 VLEGQ 181 (183)
T ss_dssp HHHTC
T ss_pred HHHHh
Confidence 77653
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.85 E-value=7.7e-22 Score=191.95 Aligned_cols=142 Identities=22% Similarity=0.228 Sum_probs=101.0
Q ss_pred cCCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHH
Q 007741 125 VNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVS 204 (591)
Q Consensus 125 ~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~ 204 (591)
.+..|.||||+|+..|+.++|++|++ +. +++..|..|+||||+|+..|+.+++++|+++|++++...+..|.||||+
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~ 117 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE-DR--DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHM 117 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT-TC--CTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHH
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc-CC--CCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHH
Confidence 34567888888888888888888888 43 4567788888888888888888888888888888744444667777777
Q ss_pred HHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHH
Q 007741 205 AATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKL 284 (591)
Q Consensus 205 A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~ 284 (591)
|+..|+.+++++|+++ +.+++..|..|.||||+|+..++ ...+.||||+|+..|+.+++++
T Consensus 118 A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~t~l~~A~~~~~------------------~~~~~~~l~~a~~~g~~~iv~~ 178 (244)
T 3ui2_A 118 AAGYVRPEVVEALVEL-GADIEVEDERGLTALELAREILK------------------TTPKGNPMQFGRRIGLEKVINV 178 (244)
T ss_dssp HHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHHT------------------TCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHHHh------------------ccCCCCHHHHHHHcChHHHHHH
Confidence 7777777777777766 45566667777777777764211 2345566666666666666666
Q ss_pred HHHc
Q 007741 285 LLEA 288 (591)
Q Consensus 285 Ll~~ 288 (591)
|++.
T Consensus 179 L~~~ 182 (244)
T 3ui2_A 179 LEGQ 182 (244)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6554
No 94
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.85 E-value=2.6e-21 Score=179.50 Aligned_cols=140 Identities=22% Similarity=0.233 Sum_probs=120.2
Q ss_pred CCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecC-CCCCcHHHHH
Q 007741 161 NRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISR-SNGKNALHFA 239 (591)
Q Consensus 161 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~-~~g~tpLh~A 239 (591)
+..|.||||.|+..|+.++++.|++ +.++ +..|..|.||||+|+..|+.+++++|++++ .+++..+ .+|.||||+|
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~~g~tpL~~A 117 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAG-ADLDHRDMRGGLTALHMA 117 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCSSSSCCHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCCHHHHH
Confidence 4568899999999999999999999 7776 667889999999999999999999999884 5555566 8899999999
Q ss_pred HHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHH
Q 007741 240 ARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTEL 319 (591)
Q Consensus 240 ~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~L 319 (591)
+..|+.+++++|+++|+++ +.+|..|+||||+|++.++. ..+.++|++|+..|+.+++++|
T Consensus 118 ~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~------------------~~~~~~l~~a~~~~~~~i~~~L 178 (183)
T 3deo_A 118 AGYVRPEVVEALVELGADI-EVEDERGLTALELAREILKT------------------TPKGNPMQFGRRIGLEKVINVL 178 (183)
T ss_dssp HHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHHHT------------------CCCCSHHHHHHHHHHHHHHHHH
T ss_pred HhcCcHHHHHHHHHcCCCC-cCCCCCCCCHHHHHHHhccC------------------cccccHHHHHHHcCHHHHHHHH
Confidence 9999999999999999988 67799999999999863321 3467899999999999999998
Q ss_pred hcC
Q 007741 320 LSL 322 (591)
Q Consensus 320 l~~ 322 (591)
.++
T Consensus 179 ~~~ 181 (183)
T 3deo_A 179 EGQ 181 (183)
T ss_dssp HTC
T ss_pred HHh
Confidence 763
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.84 E-value=1.2e-20 Score=189.16 Aligned_cols=140 Identities=24% Similarity=0.250 Sum_probs=90.3
Q ss_pred CChHHHHHHHhCcHHHHHHHHhCCCCCccc-----CCCCCCCHHHHHHHc---CCHHHHHHHHhcCCCcceecCCCCCcH
Q 007741 164 GFDPLHIAAVQGHHAIVQVLLDHDPSLSQT-----TGPSNATPLVSAATR---GHTAVVNELLSKDGGLLEISRSNGKNA 235 (591)
Q Consensus 164 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~-----~~~~g~tpL~~A~~~---g~~~~v~~LL~~~~~~~~~~~~~g~tp 235 (591)
+.++||.|+..|+.+.++.|++.++++... .+..|.||||+|+.. |+.+++++|+++ +.+++..|.+|.||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~-gadvn~~d~~G~Tp 229 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADGNTA 229 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHH-SSCTTCCCTTCCCH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhc-CCCCCCCCCCCCCH
Confidence 346677777777777777777777776432 456666777777765 666777777766 44456666667777
Q ss_pred HHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCc
Q 007741 236 LHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKR 312 (591)
Q Consensus 236 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~ 312 (591)
||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|++++++ .|.||||+|+..|+
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCC-SCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC-------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhHHHHhcCC
Confidence 77777777777777777777666 55566777777777777777777777776654 36677777766654
No 96
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.84 E-value=1.5e-21 Score=171.82 Aligned_cols=125 Identities=26% Similarity=0.315 Sum_probs=76.6
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHH
Q 007741 194 TGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMA 273 (591)
Q Consensus 194 ~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A 273 (591)
.|..|.||||+|+..|+.+++++|+++ +.+++..|..|.||||+|+..|+.+++++|+++++++ +..|..|+||||+|
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A 83 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQN-GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV-NTTGYQNDSPLHDA 83 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGGGCCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCCCCCHHHHH
Confidence 344555555555555555555555554 3334455556666666666666666666666666665 44566667777777
Q ss_pred HhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhc
Q 007741 274 VKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLS 321 (591)
Q Consensus 274 ~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~ 321 (591)
+..|+.+++++|+++|++ ++.+|..|+||||+|+..+..+++++|.+
T Consensus 84 ~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 84 AKNGHVDIVKLLLSYGAS-RNAVNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp HHTTCHHHHHHHHHTTCC-TTCCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred HHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHhhccHHHHHhhccc
Confidence 777777777777776666 56667777777777776666666655544
No 97
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.84 E-value=3.9e-21 Score=165.85 Aligned_cols=111 Identities=27% Similarity=0.325 Sum_probs=99.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHH
Q 007741 229 RSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVAT 308 (591)
Q Consensus 229 ~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~ 308 (591)
+..|.||||+|+..|+.+++++|++.++++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITPLLSAV 81 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHH
Confidence 456889999999999999999999999887 66788999999999999999999999999988 8888999999999999
Q ss_pred HcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHh
Q 007741 309 RKKRTEIVTELLSLPDTNVNALTRDHKTALDIAE 342 (591)
Q Consensus 309 ~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~ 342 (591)
..|+.+++++|++. |++++.+|..|+||||+|.
T Consensus 82 ~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 82 YEGHVSCVKLLLSK-GADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHCC
T ss_pred HcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHhC
Confidence 99999999999995 9999999999999999984
No 98
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.84 E-value=5.6e-21 Score=185.82 Aligned_cols=167 Identities=21% Similarity=0.210 Sum_probs=129.8
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHH
Q 007741 128 LGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAAT 207 (591)
Q Consensus 128 ~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 207 (591)
.+.+++.+++..|+.+.+..+...+ ...+..|.||||.|+..|+.++++.|++ +.++ +..|..|.||||+|+.
T Consensus 14 ~~~~~~l~~~~~g~~~~~~~~~~~~-----~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~ 86 (244)
T 3ui2_A 14 EGAMEYLIEWKDGHSPSWVPSSYIA-----ADVVSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAG 86 (244)
T ss_dssp TTEEEEEEEESSCCCCEEEEGGGSC-----HHHHHHHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHH
T ss_pred CCccHHHHHHHcCCCcccccccccc-----cccccCCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHH
Confidence 4556666666666665554443322 2234468899999999999999999999 7776 5677889999999999
Q ss_pred cCCHHHHHHHHhcCCCcceecC-CCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHH
Q 007741 208 RGHTAVVNELLSKDGGLLEISR-SNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLL 286 (591)
Q Consensus 208 ~g~~~~v~~LL~~~~~~~~~~~-~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll 286 (591)
.|+.+++++|+++ +.+++..+ ..|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..++
T Consensus 87 ~g~~~~v~~Ll~~-ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~~~-------- 156 (244)
T 3ui2_A 87 LGSDKCVRLLAEA-GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADI-EVEDERGLTALELAREILK-------- 156 (244)
T ss_dssp HTCHHHHHHHHHT-TCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHHT--------
T ss_pred CCCHHHHHHHHHc-CCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHHHh--------
Confidence 9999999999988 44555555 77899999999999999999999998887 6678889999999875211
Q ss_pred HcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhc
Q 007741 287 EADAAIVMLPDKFGNTALHVATRKKRTEIVTELLS 321 (591)
Q Consensus 287 ~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~ 321 (591)
+..+.||||+|+..|+.+++++|++
T Consensus 157 ----------~~~~~~~l~~a~~~g~~~iv~~L~~ 181 (244)
T 3ui2_A 157 ----------TTPKGNPMQFGRRIGLEKVINVLEG 181 (244)
T ss_dssp ----------TCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ----------ccCCCCHHHHHHHcChHHHHHHHHH
Confidence 2457889999999999998888886
No 99
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.83 E-value=3.5e-20 Score=183.70 Aligned_cols=127 Identities=22% Similarity=0.265 Sum_probs=101.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCcccc-----cccCCCCCcHHHHHHhC---CCHHHHHHHHHcCcccccCCCCCCCcH
Q 007741 232 GKNALHFAARQGHVDVVKALLSKDPQLA-----RRTDKKGQTALHMAVKG---QSCEVVKLLLEADAAIVMLPDKFGNTA 303 (591)
Q Consensus 232 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~-----~~~d~~g~t~Lh~A~~~---~~~~~v~~Ll~~~~~~~~~~d~~g~T~ 303 (591)
..++|+.|+..|+.+.+..+++.|+++. +..|..|+||||+|+.. |+.+++++|+++|++ ++.+|..|+||
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in~~d~~g~Tp 208 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGKGSTA 208 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCCTTCCCH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-ccccCCCCCCH
Confidence 3467888888888888888888877753 23377788888888887 788888888888887 77788888888
Q ss_pred HHHHHHcCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCccc
Q 007741 304 LHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVR 364 (591)
Q Consensus 304 Lh~A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~ 364 (591)
||+|+..|+.+++++|++ .|+|++.+|..|+||||+|+..+ +.+++++|+++|+.+
T Consensus 209 Lh~A~~~g~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~----~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 209 LHYCCLTDNAECLKLLLR-GKASIEIANESGETPLDIAKRLK----HEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTT----CHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHH-cCCCCCCccCCCCCHHHHHHHcC----CHHHHHHHHHcCCCC
Confidence 888888888888888888 48888888888888888888887 778888888887753
No 100
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.83 E-value=1.3e-20 Score=188.99 Aligned_cols=140 Identities=19% Similarity=0.153 Sum_probs=115.7
Q ss_pred CCcHhHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccc------cCCCCCcHHHHHHHh---CcHHH
Q 007741 74 NDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNE------VNELGETALFTAADK---GHIEV 144 (591)
Q Consensus 74 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~n~~g~TpL~~Aa~~---g~~~~ 144 (591)
+.++||.|+..|+.+.++.|++. +..++. .|..|.||||+|+.. |+.++
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~----------------------g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~i 208 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFAN----------------------GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPL 208 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHT----------------------TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhc----------------------CCcccccCCCcccCCCCccHHHHHHHhcccCcHHH
Confidence 44779999999999999999976 334444 588999999999997 89999
Q ss_pred HHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCc
Q 007741 145 VNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGL 224 (591)
Q Consensus 145 v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~ 224 (591)
+++|+++|++ ++..|..|+||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|++++.
T Consensus 209 v~~Ll~~gad--vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga-- 283 (301)
T 2b0o_E 209 VDFIIQNGGH--LDAKAADGNTALHYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQAQA-- 283 (301)
T ss_dssp HHHHHHHSSC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCC-SCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH--
T ss_pred HHHHHhcCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC--
Confidence 9999998765 5778899999999999999999999999999998 6788899999999999999999999998743
Q ss_pred ceecCCCCCcHHHHHHHcCCH
Q 007741 225 LEISRSNGKNALHFAARQGHV 245 (591)
Q Consensus 225 ~~~~~~~g~tpLh~A~~~g~~ 245 (591)
..|.||||+|+..|+.
T Consensus 284 -----~~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 284 -----GTFAFPLHVDYSWVIS 299 (301)
T ss_dssp -----HTTSSCCC--------
T ss_pred -----CCCCChhHHHHhcCCc
Confidence 2578999999988764
No 101
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.83 E-value=2.3e-20 Score=184.93 Aligned_cols=194 Identities=21% Similarity=0.251 Sum_probs=145.2
Q ss_pred ccCCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHH
Q 007741 124 EVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLV 203 (591)
Q Consensus 124 ~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~ 203 (591)
..|..+.+.|+++...|+..+.+++............+ .+... ......-..+++................++|+
T Consensus 61 ~~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~-~~s~~----~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~ 135 (278)
T 1dcq_A 61 TLDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPN-PGSDM----IARKDYITAKYMERRYARKKHADTAAKLHSLC 135 (278)
T ss_dssp TTSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCC-TTCCH----HHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCC-CCCCH----HHHHHHHHHHHHHhhcccccccccchhhhhhh
Confidence 36778899999999999988877665432211110111 11112 11222223334444322221222222347899
Q ss_pred HHHHcCCHHHHHHHHhcCCCc-----ceecCCCCCcHHHHHHHc---CCHHHHHHHHhcCcccccccCCCCCcHHHHHHh
Q 007741 204 SAATRGHTAVVNELLSKDGGL-----LEISRSNGKNALHFAARQ---GHVDVVKALLSKDPQLARRTDKKGQTALHMAVK 275 (591)
Q Consensus 204 ~A~~~g~~~~v~~LL~~~~~~-----~~~~~~~g~tpLh~A~~~---g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~ 275 (591)
.|+..|+.+.+..+++.+... ++..+..|.||||+|+.. |+.+++++|+++|+++ +..|..|+||||+|+.
T Consensus 136 ~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~TpLh~A~~ 214 (278)
T 1dcq_A 136 EAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTALHYCCL 214 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCHHHHHHH
T ss_pred hHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCCCHHHHHHH
Confidence 999999999999999885543 344578899999999999 8999999999999998 6779999999999999
Q ss_pred CCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcCCCC
Q 007741 276 GQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDT 325 (591)
Q Consensus 276 ~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~ 325 (591)
.|+.+++++|+++|++ ++.+|.+|.||||+|+..|+.+++++|++. |+
T Consensus 215 ~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga 262 (278)
T 1dcq_A 215 TDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQA-LS 262 (278)
T ss_dssp TTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-HT
T ss_pred cCCHHHHHHHHHcCCC-CCCccCCCCCHHHHHHHcCCHHHHHHHHHc-CC
Confidence 9999999999999998 899999999999999999999999999985 44
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.82 E-value=7.2e-21 Score=182.18 Aligned_cols=133 Identities=25% Similarity=0.318 Sum_probs=79.9
Q ss_pred ccccCCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhC-CCCCcccCCCCCCC
Q 007741 122 VNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDH-DPSLSQTTGPSNAT 200 (591)
Q Consensus 122 ~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~-~~~~~~~~~~~g~t 200 (591)
++..+..|.||||+|+..|+.++|++|++.+.+ ++..|..|+||||+|+..|+.+++++|+++ +.++ +..|..|.|
T Consensus 66 v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~t 142 (222)
T 3ehr_A 66 VAEQAESIDNPLHEAAKRGNLSWLRECLDNRVG--VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDT 142 (222)
T ss_dssp HHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCC
T ss_pred ccccccccccccccccccCcHHHHHHHHhCCCC--ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCC
Confidence 344566677777777777777777777775533 455666677777777777777777777776 5554 445556666
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCccc
Q 007741 201 PLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQL 258 (591)
Q Consensus 201 pL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~ 258 (591)
|||+|+..|+.+++++|+++ +.+++..|.+|.||||+|+..|+.++++.|++.++..
T Consensus 143 pL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 143 ALHAAAWKGYADIVQLLLAK-GARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp HHHHHHHHTCHHHHHHHHHH-TCCSCCCCTTSCCHHHHCCSHHHHHHHC---------
T ss_pred HHHHHHHcCCHHHHHHHHHc-CCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhh
Confidence 66666666666666666665 3445555666666666666666666666666555543
No 103
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.82 E-value=7.8e-21 Score=181.91 Aligned_cols=129 Identities=27% Similarity=0.327 Sum_probs=71.8
Q ss_pred CCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHH
Q 007741 160 KNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFA 239 (591)
Q Consensus 160 ~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A 239 (591)
.+..|.||||+|+..|+.+++++|++.++++ +..|..|.||||+|+..|+.+++++|++..+.+++..|..|.||||+|
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A 147 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAA 147 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHH
Confidence 3556778888888888888888888877765 445556666666666666666666666554444444555555555555
Q ss_pred HHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCc
Q 007741 240 ARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADA 290 (591)
Q Consensus 240 ~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~ 290 (591)
+..|+.+++++|+++|+++ +..|..|+||||+|+..++.++++.|++.++
T Consensus 148 ~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~ 197 (222)
T 3ehr_A 148 AWKGYADIVQLLLAKGART-DLRNIEKKLAFDMATNAACASLLKKKQGTDA 197 (222)
T ss_dssp HHHTCHHHHHHHHHHTCCS-CCCCTTSCCHHHHCCSHHHHHHHC-------
T ss_pred HHcCCHHHHHHHHHcCCCC-ccccCCCCCHHHHhcchhHHHHHHHHhccch
Confidence 5555555555555554444 3334444444444444444444444444443
No 104
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.82 E-value=1.4e-20 Score=162.36 Aligned_cols=108 Identities=26% Similarity=0.325 Sum_probs=61.7
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhcCCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCC
Q 007741 198 NATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQ 277 (591)
Q Consensus 198 g~tpL~~A~~~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~ 277 (591)
|.||||+|+..|+.+++++|++.+ .+++..|..|.||||+|+..|+.+++++|++.++++ +..|..|+||||+|+..|
T Consensus 7 ~~~~l~~A~~~~~~~~v~~ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~tpL~~A~~~~ 84 (123)
T 3aaa_C 7 CDKEFMWALKNGDLDEVKDYVAKG-EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSAVYEG 84 (123)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTT-CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHHT
T ss_pred cchHHHHHHHcCCHHHHHHHHHcC-CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcC
Confidence 444555555555555555555442 234444555556666666666666666666665555 444566666666666666
Q ss_pred CHHHHHHHHHcCcccccCCCCCCCcHHHHHH
Q 007741 278 SCEVVKLLLEADAAIVMLPDKFGNTALHVAT 308 (591)
Q Consensus 278 ~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~ 308 (591)
+.+++++|+++|++ ++.+|.+|+||||+|.
T Consensus 85 ~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 85 HVSCVKLLLSKGAD-KTVKGPDGLTAFEATD 114 (123)
T ss_dssp CHHHHHHHHHTTCC-TTCCCTTSCCHHHHCC
T ss_pred CHHHHHHHHHcCCC-CCCcCCCCCCHHHHhC
Confidence 66666666666655 5556666666666663
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.78 E-value=8.9e-19 Score=179.78 Aligned_cols=147 Identities=20% Similarity=0.229 Sum_probs=103.9
Q ss_pred CCCCCcHhHHHHHc-CCHHHHHHHHcCCCcccccccCCCcchhHHHHhhcccccccC--CCCCcHHHHHHHhCcHHHHHH
Q 007741 71 GRHNDTELHLAAQR-GDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVN--ELGETALFTAADKGHIEVVNE 147 (591)
Q Consensus 71 ~~~g~t~Lh~Aa~~-g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n--~~g~TpL~~Aa~~g~~~~v~~ 147 (591)
+.++.|+||.|+.. |+.++++.||+. +..++..| ..|.||||+|+..|+.++|++
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~----------------------Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~ 253 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAH----------------------GADVNWVNGGQDNATPLIQATAANSLLACEF 253 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHT----------------------TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHc----------------------CCCCCccccccCCCCHHHHHHHCCCHHHHHH
Confidence 34566889999888 899999888876 55677777 788899999999899999999
Q ss_pred HHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCc--c
Q 007741 148 LLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGL--L 225 (591)
Q Consensus 148 Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~LL~~~~~~--~ 225 (591)
|+++|++ ++..|..|+||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|+...... .
T Consensus 254 LL~~Gad--vn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~-~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~ 330 (368)
T 3jue_A 254 LLQNGAN--VNQADSAGRGPLHHATILGHTGLACLFLKRGADL-GARDSEGRDPLTIAMETANADIVTLLRLAKMREAEA 330 (368)
T ss_dssp HHHTTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----
T ss_pred HHHcCCC--CCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccc
Confidence 8887654 5677888889999999888999999998888887 667788888888888888888888888764222 2
Q ss_pred eecCCCCCcHHHHHHHc
Q 007741 226 EISRSNGKNALHFAARQ 242 (591)
Q Consensus 226 ~~~~~~g~tpLh~A~~~ 242 (591)
...+..+.|+++.+...
T Consensus 331 ~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 331 AQGQAGDETYLDIFRDF 347 (368)
T ss_dssp -----------------
T ss_pred cccCCCCCCHHHHHHHH
Confidence 23345566666665543
No 106
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.77 E-value=5.4e-19 Score=150.31 Aligned_cols=109 Identities=38% Similarity=0.481 Sum_probs=99.0
Q ss_pred ecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHH
Q 007741 227 ISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHV 306 (591)
Q Consensus 227 ~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~ 306 (591)
..|.+|.||||+|+..|+.+++++|++.++++ +..|..|+||||+|+..++.+++++|+++|++ ++.+|..|+||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD-VNARSKDGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-TTCCCTTCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCCHHHH
Confidence 46889999999999999999999999999987 66789999999999999999999999999988 78899999999999
Q ss_pred HHHcCcHHHHHHHhcCCCCCcccccCCCCCHH
Q 007741 307 ATRKKRTEIVTELLSLPDTNVNALTRDHKTAL 338 (591)
Q Consensus 307 A~~~g~~~iv~~Ll~~~g~d~~~~d~~G~t~L 338 (591)
|+..|+.+++++|++ .|+++|.++..|.+|-
T Consensus 82 A~~~~~~~~~~~Ll~-~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDA-KGADVNARSWGSSHHH 112 (115)
T ss_dssp HHTTTCHHHHHHHHT-TSSSHHHHSCCCC---
T ss_pred HHHCCCHHHHHHHHH-cCCCCCcCCccccccc
Confidence 999999999999998 5999999999999873
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.77 E-value=1.4e-18 Score=141.72 Aligned_cols=92 Identities=48% Similarity=0.686 Sum_probs=63.6
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHc
Q 007741 231 NGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRK 310 (591)
Q Consensus 231 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~ 310 (591)
+|+||||+|+..|+.+++++|++.++++ +.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHc
Confidence 3667777777777777777777777666 55567777777777777777777777777766 666677777777777777
Q ss_pred CcHHHHHHHhcCCCC
Q 007741 311 KRTEIVTELLSLPDT 325 (591)
Q Consensus 311 g~~~iv~~Ll~~~g~ 325 (591)
|+.+++++|++. |+
T Consensus 79 ~~~~~~~~Ll~~-ga 92 (93)
T 1n0q_A 79 GHLEVVKLLLEA-GA 92 (93)
T ss_dssp TCHHHHHHHHHT-TC
T ss_pred CCHHHHHHHHHc-CC
Confidence 777777777763 44
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.77 E-value=1.1e-18 Score=179.21 Aligned_cols=144 Identities=19% Similarity=0.211 Sum_probs=84.7
Q ss_pred CCCHHHHHHHc-CCHHHHHHHHhcCCCcceecC--CCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHH
Q 007741 198 NATPLVSAATR-GHTAVVNELLSKDGGLLEISR--SNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAV 274 (591)
Q Consensus 198 g~tpL~~A~~~-g~~~~v~~LL~~~~~~~~~~~--~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 274 (591)
+.|+||.|+.. |+.++++.|+++ +.+++..+ ..|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~-Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~TpLh~A~ 276 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAH-GADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGPLHHAT 276 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHT-TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHc-CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH
Confidence 34567777776 777777777765 34445555 66777777777777777777777777766 555777777777777
Q ss_pred hCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHcCcHHHHHHHhcC--CCCCcccccCCCCCHHHHHhhC
Q 007741 275 KGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSL--PDTNVNALTRDHKTALDIAEGL 344 (591)
Q Consensus 275 ~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~--~g~d~~~~d~~G~t~L~~A~~~ 344 (591)
..|+.+++++|+++|++ ++.+|.+|+||||+|+..|+.+++++|+.. .+.+....+..+.|+++++...
T Consensus 277 ~~g~~~~v~~LL~~Gad-~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 277 ILGHTGLACLFLKRGAD-LGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp HHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred HcCcHHHHHHHHHCcCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 77777777777777766 666777777777777777777777777652 2334445556666777666544
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.77 E-value=1.6e-18 Score=186.46 Aligned_cols=98 Identities=28% Similarity=0.340 Sum_probs=64.6
Q ss_pred CCCCCcHHHHHHH---cCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHH
Q 007741 229 RSNGKNALHFAAR---QGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALH 305 (591)
Q Consensus 229 ~~~g~tpLh~A~~---~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh 305 (591)
+..|.||||+|+. .|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpl~ 245 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALD 245 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCC-CSCCCTTCCCHHH
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHH
Confidence 5566666666654 66677777777777666 55566677777777777777777777777766 6666777777777
Q ss_pred HHHHcCcHHHHHHHhcCCCCCccc
Q 007741 306 VATRKKRTEIVTELLSLPDTNVNA 329 (591)
Q Consensus 306 ~A~~~g~~~iv~~Ll~~~g~d~~~ 329 (591)
+|+..|+.+++++|++ .|++++.
T Consensus 246 ~A~~~~~~~~~~~Ll~-~ga~~~~ 268 (497)
T 3lvq_E 246 IARKKHHKECEELLEQ-AQAGTFA 268 (497)
T ss_dssp HHHHTTCHHHHHHHHH-TCC----
T ss_pred HHHHcCCHHHHHHHHH-hCCCCCC
Confidence 7777777777777776 3666655
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.76 E-value=2.4e-18 Score=140.34 Aligned_cols=68 Identities=38% Similarity=0.605 Sum_probs=33.1
Q ss_pred cccccccCCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCC
Q 007741 119 SSVVNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDP 188 (591)
Q Consensus 119 ~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~ 188 (591)
+..++.+|..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 25 g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~--~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 25 GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD--VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 333444455555555555555555555555554332 33444445555555555555555555555443
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.76 E-value=4.1e-18 Score=183.16 Aligned_cols=135 Identities=25% Similarity=0.318 Sum_probs=88.2
Q ss_pred hHHHHHHHhCcHHHHHHHHhCCCCCccc-----CCCCCCCHHHHHHH---cCCHHHHHHHHhcCCCcceecCCCCCcHHH
Q 007741 166 DPLHIAAVQGHHAIVQVLLDHDPSLSQT-----TGPSNATPLVSAAT---RGHTAVVNELLSKDGGLLEISRSNGKNALH 237 (591)
Q Consensus 166 t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~-----~~~~g~tpL~~A~~---~g~~~~v~~LL~~~~~~~~~~~~~g~tpLh 237 (591)
+.||.|+..|+.++++.|++.|++++.. .+..|.||||+|+. .|+.+++++|+++ +.+++..|.+|.||||
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~-ga~vn~~d~~g~TpLh 212 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH-SCCTTCCCSSSCCHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHc-CCCCCccCCCCCcHHH
Confidence 5677777777777777777777665322 25567777777755 6777777777776 4556667777777777
Q ss_pred HHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHH
Q 007741 238 FAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATR 309 (591)
Q Consensus 238 ~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~ 309 (591)
+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|++. + .||+|.+..
T Consensus 213 ~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~-~------~~~~h~~~~ 276 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQAQAGT-F------AFPLHVDYS 276 (497)
T ss_dssp HHTTTTCHHHHHHHHHTCCCC-SCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-------------------
T ss_pred HHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCC-C------CCcceeecc
Confidence 777777777777777777776 556777777777777777777777777777762 2 256666543
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.72 E-value=2e-17 Score=140.55 Aligned_cols=90 Identities=33% Similarity=0.515 Sum_probs=37.6
Q ss_pred CCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHH
Q 007741 126 NELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSA 205 (591)
Q Consensus 126 n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A 205 (591)
|.+|.||||+|+..|+.+++++|++++.+ ++..|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~--~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGAD--VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV-NARSKDGNTPEHLA 82 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCC--SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCTTCCCTTHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCCHHHHH
Confidence 44444444444444444444444443322 2333444444444444444444444444444443 22333333333333
Q ss_pred HHcCCHHHHHHHH
Q 007741 206 ATRGHTAVVNELL 218 (591)
Q Consensus 206 ~~~g~~~~v~~LL 218 (591)
+..|+.+++++|+
T Consensus 83 ~~~~~~~~~~~Ll 95 (115)
T 2l6b_A 83 KKNGHHEIVKLLD 95 (115)
T ss_dssp HTTTCHHHHHHHH
T ss_pred HHCCCHHHHHHHH
Confidence 3333333333333
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.63 E-value=6e-16 Score=130.31 Aligned_cols=91 Identities=37% Similarity=0.488 Sum_probs=66.2
Q ss_pred ecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHH
Q 007741 227 ISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHV 306 (591)
Q Consensus 227 ~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~ 306 (591)
..|.+|.||||+|+..|+.+++++|++.++++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD-VXAQDKFGKTAFDI 96 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccccCCCcHHHH
Confidence 34567777777777777777777777777766 55577777777777777777777777777776 66777777777777
Q ss_pred HHHcCcHHHHHHH
Q 007741 307 ATRKKRTEIVTEL 319 (591)
Q Consensus 307 A~~~g~~~iv~~L 319 (591)
|+..|+.+++++|
T Consensus 97 A~~~~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 7777777777765
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.63 E-value=1e-15 Score=128.88 Aligned_cols=96 Identities=22% Similarity=0.318 Sum_probs=78.2
Q ss_pred cccccccCCCCCcHHHHHHHhCcHHHHHHHHhcCCCccCccCCCCCChHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCC
Q 007741 119 SSVVNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSN 198 (591)
Q Consensus 119 ~~~~~~~n~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g 198 (591)
+......|.+|.||||+|+..|+.+++++|++.+. +++.+|..|.||||+|+..|+.+++++|+++|+++ +..|..|
T Consensus 14 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g 90 (110)
T 2zgd_A 14 VPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGA--DVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV-XAQDKFG 90 (110)
T ss_dssp --------CCHHHHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTS
T ss_pred CCcccccCCccchHHHHHHHcCCHHHHHHHHHcCC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccccCC
Confidence 44567788899999999999999999999999764 45677889999999999999999999999999887 5677889
Q ss_pred CCHHHHHHHcCCHHHHHHH
Q 007741 199 ATPLVSAATRGHTAVVNEL 217 (591)
Q Consensus 199 ~tpL~~A~~~g~~~~v~~L 217 (591)
.||||+|+..|+.+++++|
T Consensus 91 ~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 91 KTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCHHHHHHHHTCHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHh
Confidence 9999999999999998876
No 115
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=62.80 E-value=4 Score=26.73 Aligned_cols=29 Identities=17% Similarity=0.221 Sum_probs=18.7
Q ss_pred chhhhhHHHHHHHHHHHHHHHhhhheeec
Q 007741 525 EWAAILVTVVGGLIMAGVLGTMTYYVVKS 553 (591)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (591)
...+|...++++++++.+++..++|+.+.
T Consensus 9 ~~~~IA~gVVgGv~~~~ii~~~~~~~~RR 37 (44)
T 2ks1_B 9 KIPSIATGMVGALLLLLVVALGIGLFMRR 37 (44)
T ss_dssp CSSSSTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcceEEeehhHHHHHHHHHHHHHHHHhhh
Confidence 34567778888777766666555555443
No 116
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=62.14 E-value=5.7 Score=25.99 Aligned_cols=29 Identities=24% Similarity=0.339 Sum_probs=18.3
Q ss_pred chhhhhHHHHHHHHHHHHHHHhhhheeec
Q 007741 525 EWAAILVTVVGGLIMAGVLGTMTYYVVKS 553 (591)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (591)
...+|...+++++..+.+++...+++.+.
T Consensus 8 ~~~aIA~gVVgGv~~v~ii~~~~~~~~RR 36 (44)
T 2l2t_A 8 RTPLIAAGVIGGLFILVIVGLTFAVYVRR 36 (44)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcceEEEeehHHHHHHHHHHHHHHHHhhh
Confidence 44567778888777766666555555443
No 117
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=39.58 E-value=35 Score=33.45 Aligned_cols=23 Identities=13% Similarity=0.293 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 007741 496 VINKLMWLASVCTSVAFIASSYI 518 (591)
Q Consensus 496 ~~~~~~~~~~~~~~~af~~~~~~ 518 (591)
.++.|..++.+++...|++|+|=
T Consensus 278 ~mk~LTiit~IflP~T~IaGiyG 300 (339)
T 4ev6_A 278 IMKILTMVTTIFAVPMWITGIYG 300 (339)
T ss_dssp HHHHHHHHHHHSSHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc
Confidence 44557788999999999999994
No 118
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=36.72 E-value=27 Score=23.88 Aligned_cols=25 Identities=20% Similarity=0.254 Sum_probs=16.2
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhhh
Q 007741 524 HEWAAILVTVVGGLIMAGVLGTMTY 548 (591)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (591)
..|..|++.++++++++.++..++|
T Consensus 7 vp~WiIi~svl~GLLLL~Lii~~Lw 31 (54)
T 2l8s_A 7 VPLWVILLSAFAGLLLLMLLILALW 31 (54)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566777777777766655555
No 119
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=31.47 E-value=27 Score=23.89 Aligned_cols=25 Identities=28% Similarity=0.384 Sum_probs=15.9
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhhh
Q 007741 524 HEWAAILVTVVGGLIMAGVLGTMTY 548 (591)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (591)
..|..|++.++++++++.++..++|
T Consensus 10 vp~wiIi~svl~GLllL~li~~~Lw 34 (54)
T 2knc_A 10 IPIWWVLVGVLGGLLLLTILVLAMW 34 (54)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566777777777766555555
No 120
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=29.16 E-value=49 Score=21.34 Aligned_cols=24 Identities=29% Similarity=0.430 Sum_probs=15.1
Q ss_pred chhhhhHHHHHHHHHHHHHHHhhh
Q 007741 525 EWAAILVTVVGGLIMAGVLGTMTY 548 (591)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~ 548 (591)
.|..|++.+++++.++.++..++|
T Consensus 9 p~wiIi~s~l~GLllL~li~~~Lw 32 (42)
T 2k1a_A 9 PIWWVLVGVLGGLLLLTILVLAMW 32 (42)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566777777777766555555
No 121
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=28.64 E-value=53 Score=32.46 Aligned_cols=22 Identities=32% Similarity=0.570 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 007741 496 VINKLMWLASVCTSVAFIASSY 517 (591)
Q Consensus 496 ~~~~~~~~~~~~~~~af~~~~~ 517 (591)
.+++|..++.+++...|++|+|
T Consensus 302 imk~LTiit~IflP~T~IaGiy 323 (363)
T 2iub_A 302 VMKVLTIIATIFMPLTFIAGIY 323 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHhhh
Confidence 4456778899999999999998
No 122
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=27.03 E-value=35 Score=22.26 Aligned_cols=25 Identities=28% Similarity=0.481 Sum_probs=12.0
Q ss_pred chhhhhHHHHHHHHHHHHHHHhhhhe
Q 007741 525 EWAAILVTVVGGLIMAGVLGTMTYYV 550 (591)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (591)
...+|...++| ++++.+++..++++
T Consensus 10 ~~~~Ia~~vVG-vll~vi~~l~~~~~ 34 (44)
T 2jwa_A 10 PLTSIISAVVG-ILLVVVLGVVFGIL 34 (44)
T ss_dssp SHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred cccchHHHHHH-HHHHHHHHHHHHhh
Confidence 33445566666 44444444444433
No 123
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=25.72 E-value=21 Score=35.25 Aligned_cols=96 Identities=7% Similarity=0.083 Sum_probs=45.1
Q ss_pred cCCCCCcHHHHHHhCCCHHHHHHHHHcC--cccccCCCCCCCcHHHHHHHcCcHH----HHHHHhcCC-C----CCcccc
Q 007741 262 TDKKGQTALHMAVKGQSCEVVKLLLEAD--AAIVMLPDKFGNTALHVATRKKRTE----IVTELLSLP-D----TNVNAL 330 (591)
Q Consensus 262 ~d~~g~t~Lh~A~~~~~~~~v~~Ll~~~--~~~~~~~d~~g~T~Lh~A~~~g~~~----iv~~Ll~~~-g----~d~~~~ 330 (591)
.|..|+-.+..+.+.+..+..+.+++.- .-..-..++.|...+.-+...+..+ +++.|+... | ...-..
T Consensus 213 ~d~~Gn~ViQ~~l~~~~~~~~~~i~~~l~~~~~~Ls~~k~gs~Vvek~l~~~~~~~r~~ii~el~~~~~~~~~~l~~l~~ 292 (351)
T 3gvo_A 213 QDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMK 292 (351)
T ss_dssp TSTTHHHHHHHHHHHSCHHHHHHHHHTTTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHHSCEETTEEHHHHHHH
T ss_pred CCchHHHHHHHHHHhCchhhHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhCCHHHHHHHHHHHhcccCCCChHHHHccC
Confidence 3555666666666655555544444421 1111223455555555555544332 344444311 0 112235
Q ss_pred cCCCCCHHHHHhhCCCChhhHHHHHHH
Q 007741 331 TRDHKTALDIAEGLPSSEEASEIKDCL 357 (591)
Q Consensus 331 d~~G~t~L~~A~~~~~~~~~~~i~~~L 357 (591)
|..|+-.+..+...........+.+.+
T Consensus 293 d~ygnyViq~~L~~~~~~~r~~i~~~i 319 (351)
T 3gvo_A 293 DQYANYVVQKMIDMAEPAQRKIIMHKI 319 (351)
T ss_dssp STTHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHhCCHHHHHHHHHHH
Confidence 677776766666555433334444444
No 124
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=23.85 E-value=43 Score=24.99 Aligned_cols=25 Identities=16% Similarity=0.541 Sum_probs=15.8
Q ss_pred chhhhhHHHHHHHHHHHHHHHhhhh
Q 007741 525 EWAAILVTVVGGLIMAGVLGTMTYY 549 (591)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (591)
...+|+..+++++++++++..+++.
T Consensus 9 n~~~Iv~gvi~gilliGllllliwk 33 (79)
T 2knc_B 9 DILVVLLSVMGAILLIGLAALLIWK 33 (79)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHH
Confidence 3455666777777777776655553
No 125
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=21.72 E-value=3.4e+02 Score=27.67 Aligned_cols=29 Identities=3% Similarity=0.019 Sum_probs=13.7
Q ss_pred HHHHhhHHHHHHHHHHHHHHhhcccccch
Q 007741 460 IFFIFNAIALFTSLAVVVVQITLVRGETK 488 (591)
Q Consensus 460 ~f~~~~~~a~~~S~~~~~~~~~~~~~~~~ 488 (591)
+.++.++-....+.+..++.-.+..++..
T Consensus 343 ~P~v~~~gGn~Gtq~~t~~ir~la~~~~~ 371 (473)
T 2zy9_A 343 VPVLLGTGGNTGNQSATLIIRALATRDLD 371 (473)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHhhcCcHHHHHHHHHHHHHhcCCCC
Confidence 34455555555555544444334444433
Done!